Multiple sequence alignment - TraesCS2A01G227500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G227500 chr2A 100.000 3063 0 0 524 3586 240758330 240761392 0.000000e+00 5657.0
1 TraesCS2A01G227500 chr2A 100.000 187 0 0 1 187 240757807 240757993 2.650000e-91 346.0
2 TraesCS2A01G227500 chr2A 96.842 95 3 0 1597 1691 240759309 240759403 3.710000e-35 159.0
3 TraesCS2A01G227500 chr2A 96.842 95 3 0 1503 1597 240759403 240759497 3.710000e-35 159.0
4 TraesCS2A01G227500 chr2D 93.661 1341 60 16 1597 2922 222647132 222648462 0.000000e+00 1982.0
5 TraesCS2A01G227500 chr2D 96.763 865 25 2 734 1598 222646366 222647227 0.000000e+00 1439.0
6 TraesCS2A01G227500 chr2D 95.946 222 8 1 524 745 222643135 222643355 3.400000e-95 359.0
7 TraesCS2A01G227500 chr2D 92.063 189 13 2 1 187 222642913 222643101 7.630000e-67 265.0
8 TraesCS2A01G227500 chr2B 88.604 1211 84 28 1600 2795 346670681 346669510 0.000000e+00 1423.0
9 TraesCS2A01G227500 chr2B 91.502 812 40 14 789 1596 346671378 346670592 0.000000e+00 1090.0
10 TraesCS2A01G227500 chr2B 93.162 117 8 0 633 749 109298848 109298732 4.760000e-39 172.0
11 TraesCS2A01G227500 chr2B 89.189 111 11 1 3476 3586 579797411 579797520 1.740000e-28 137.0
12 TraesCS2A01G227500 chr2B 95.238 63 3 0 677 739 346673332 346673270 2.280000e-17 100.0
13 TraesCS2A01G227500 chr2B 80.180 111 7 5 524 619 109298995 109298885 6.420000e-08 69.4
14 TraesCS2A01G227500 chr5B 89.537 583 54 7 2009 2589 284000801 284000224 0.000000e+00 732.0
15 TraesCS2A01G227500 chr5B 85.574 610 58 14 935 1537 284001943 284001357 2.370000e-171 612.0
16 TraesCS2A01G227500 chr5D 89.249 586 52 9 2009 2589 251955386 251954807 0.000000e+00 723.0
17 TraesCS2A01G227500 chr5D 83.861 632 63 25 951 1569 251956376 251955771 1.870000e-157 566.0
18 TraesCS2A01G227500 chr5D 84.663 163 22 3 2977 3137 242972273 242972112 3.710000e-35 159.0
19 TraesCS2A01G227500 chr5A 88.115 589 57 8 2008 2589 334745299 334744717 0.000000e+00 688.0
20 TraesCS2A01G227500 chr5A 83.756 591 63 16 986 1569 334746326 334745762 2.450000e-146 529.0
21 TraesCS2A01G227500 chr4D 80.131 458 66 18 2123 2572 253867181 253866741 5.780000e-83 318.0
22 TraesCS2A01G227500 chr1B 92.268 194 13 2 983 1175 657319379 657319571 1.270000e-69 274.0
23 TraesCS2A01G227500 chr7D 92.000 100 8 0 3487 3586 593448322 593448421 1.340000e-29 141.0
24 TraesCS2A01G227500 chr7A 92.784 97 7 0 3490 3586 643991904 643991808 1.340000e-29 141.0
25 TraesCS2A01G227500 chr7A 90.722 97 9 0 3490 3586 63336018 63335922 2.910000e-26 130.0
26 TraesCS2A01G227500 chr7A 86.301 73 10 0 1248 1320 59626528 59626600 2.970000e-11 80.5
27 TraesCS2A01G227500 chr6A 92.784 97 7 0 3490 3586 135366507 135366411 1.340000e-29 141.0
28 TraesCS2A01G227500 chr4A 92.784 97 7 0 3490 3586 617039760 617039664 1.340000e-29 141.0
29 TraesCS2A01G227500 chr3A 92.784 97 7 0 3490 3586 167108422 167108326 1.340000e-29 141.0
30 TraesCS2A01G227500 chr1A 92.000 100 8 0 3484 3583 34862951 34863050 1.340000e-29 141.0
31 TraesCS2A01G227500 chr1A 91.262 103 9 0 3484 3586 63835347 63835449 1.340000e-29 141.0
32 TraesCS2A01G227500 chr1A 79.476 229 13 8 557 761 430580282 430580064 8.080000e-27 132.0
33 TraesCS2A01G227500 chr3B 79.208 101 16 5 2923 3020 12452924 12452826 8.310000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G227500 chr2A 240757807 240761392 3585 False 1580.25 5657 98.421000 1 3586 4 chr2A.!!$F1 3585
1 TraesCS2A01G227500 chr2D 222642913 222648462 5549 False 1011.25 1982 94.608250 1 2922 4 chr2D.!!$F1 2921
2 TraesCS2A01G227500 chr2B 346669510 346673332 3822 True 871.00 1423 91.781333 677 2795 3 chr2B.!!$R2 2118
3 TraesCS2A01G227500 chr5B 284000224 284001943 1719 True 672.00 732 87.555500 935 2589 2 chr5B.!!$R1 1654
4 TraesCS2A01G227500 chr5D 251954807 251956376 1569 True 644.50 723 86.555000 951 2589 2 chr5D.!!$R2 1638
5 TraesCS2A01G227500 chr5A 334744717 334746326 1609 True 608.50 688 85.935500 986 2589 2 chr5A.!!$R1 1603

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.615331 AATCCTCTCTTGCTCGCCAA 59.385 50.0 0.0 0.0 0.0 4.52 F
1032 5668 0.107116 TCCGTCTACCAGCTCCTCTC 60.107 60.0 0.0 0.0 0.0 3.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1601 6346 0.041312 CGTTCCAAGACAAACTGCCG 60.041 55.000 0.0 0.0 0.0 5.69 R
2591 7440 1.001520 TCCACAGGACATAACACCACG 59.998 52.381 0.0 0.0 0.0 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 1.452145 TTTCGCCTCCTTGCCAACAC 61.452 55.000 0.00 0.00 0.00 3.32
50 51 1.614317 GCCTCCTTGCCAACACAGTAT 60.614 52.381 0.00 0.00 0.00 2.12
53 54 1.702401 TCCTTGCCAACACAGTATGGA 59.298 47.619 8.46 0.00 43.62 3.41
64 65 1.112315 CAGTATGGAGAGGAGGCGCT 61.112 60.000 7.64 0.00 0.00 5.92
87 88 3.370953 CGGGGAGAGATCCTTGATTTTGT 60.371 47.826 0.00 0.00 0.00 2.83
89 90 4.400567 GGGGAGAGATCCTTGATTTTGTTG 59.599 45.833 0.00 0.00 0.00 3.33
99 100 2.452366 GATTTTGTTGCGTCGGCGGT 62.452 55.000 13.05 0.00 44.10 5.68
157 158 0.615331 AATCCTCTCTTGCTCGCCAA 59.385 50.000 0.00 0.00 0.00 4.52
170 171 2.989253 GCCAAAGTTCCCCCACGG 60.989 66.667 0.00 0.00 0.00 4.94
176 177 1.986632 AAGTTCCCCCACGGTCGTTT 61.987 55.000 0.00 0.00 0.00 3.60
181 182 1.743995 CCCCACGGTCGTTTCATCC 60.744 63.158 0.00 0.00 0.00 3.51
184 185 1.743995 CACGGTCGTTTCATCCCCC 60.744 63.158 0.00 0.00 0.00 5.40
607 608 1.716826 GCGACGACGAGGAGGATCTT 61.717 60.000 12.29 0.00 42.66 2.40
697 698 2.301870 CCTGCAGGTTAGGTCACTGTAA 59.698 50.000 25.53 0.00 34.79 2.41
918 5548 3.420300 TCTCCTCGATATAAGACCGCT 57.580 47.619 0.00 0.00 0.00 5.52
1032 5668 0.107116 TCCGTCTACCAGCTCCTCTC 60.107 60.000 0.00 0.00 0.00 3.20
1035 5671 1.687563 GTCTACCAGCTCCTCTCTCC 58.312 60.000 0.00 0.00 0.00 3.71
1063 5699 1.301677 CTCGCCTGTTTGCCTTCTCC 61.302 60.000 0.00 0.00 0.00 3.71
1079 5715 0.318360 CTCCCACGTATTATCGCGCA 60.318 55.000 8.75 0.00 0.00 6.09
1378 6016 6.183360 GGCTATGTTTGTGATTGCTGTCTTAT 60.183 38.462 0.00 0.00 0.00 1.73
1454 6095 2.502213 TTTTCTGTCTCGTCGAAGCA 57.498 45.000 0.00 0.00 0.00 3.91
1455 6096 2.724977 TTTCTGTCTCGTCGAAGCAT 57.275 45.000 0.00 0.00 0.00 3.79
1535 6176 2.248248 TGTCTTGGAACGGATCTGACT 58.752 47.619 9.00 0.00 0.00 3.41
1552 6242 1.467342 GACTTTACAACCGTGATGCCC 59.533 52.381 0.00 0.00 0.00 5.36
1585 6330 7.995463 TGTTTGTATGTTTTAACAGCTTTCC 57.005 32.000 1.50 0.00 43.04 3.13
1597 6342 5.473066 AACAGCTTTCCTTAATTGCACAT 57.527 34.783 0.00 0.00 0.00 3.21
1598 6343 5.473066 ACAGCTTTCCTTAATTGCACATT 57.527 34.783 0.00 0.00 0.00 2.71
1599 6344 6.588719 ACAGCTTTCCTTAATTGCACATTA 57.411 33.333 0.00 0.00 0.00 1.90
1600 6345 6.991938 ACAGCTTTCCTTAATTGCACATTAA 58.008 32.000 11.20 11.20 0.00 1.40
1601 6346 6.868339 ACAGCTTTCCTTAATTGCACATTAAC 59.132 34.615 8.88 2.17 0.00 2.01
1602 6347 6.033831 CAGCTTTCCTTAATTGCACATTAACG 59.966 38.462 8.88 6.85 0.00 3.18
1603 6348 5.288472 GCTTTCCTTAATTGCACATTAACGG 59.712 40.000 8.88 12.28 0.00 4.44
1604 6349 4.364415 TCCTTAATTGCACATTAACGGC 57.636 40.909 8.88 0.00 0.00 5.68
1605 6350 3.759086 TCCTTAATTGCACATTAACGGCA 59.241 39.130 8.88 0.00 35.41 5.69
1606 6351 4.104776 CCTTAATTGCACATTAACGGCAG 58.895 43.478 8.88 0.00 38.97 4.85
1607 6352 4.380444 CCTTAATTGCACATTAACGGCAGT 60.380 41.667 8.88 0.00 38.97 4.40
1608 6353 3.658757 AATTGCACATTAACGGCAGTT 57.341 38.095 7.54 7.54 43.95 3.16
1609 6354 3.658757 ATTGCACATTAACGGCAGTTT 57.341 38.095 7.73 0.00 41.49 2.66
1610 6355 2.414058 TGCACATTAACGGCAGTTTG 57.586 45.000 7.73 3.64 41.49 2.93
1611 6356 1.678627 TGCACATTAACGGCAGTTTGT 59.321 42.857 7.73 4.33 41.49 2.83
1612 6357 2.287308 TGCACATTAACGGCAGTTTGTC 60.287 45.455 7.73 3.05 41.49 3.18
1613 6358 2.031157 GCACATTAACGGCAGTTTGTCT 60.031 45.455 7.73 0.00 41.49 3.41
1614 6359 3.550030 GCACATTAACGGCAGTTTGTCTT 60.550 43.478 7.73 0.00 41.49 3.01
1615 6360 3.974401 CACATTAACGGCAGTTTGTCTTG 59.026 43.478 7.73 2.14 41.49 3.02
1616 6361 3.004315 ACATTAACGGCAGTTTGTCTTGG 59.996 43.478 7.73 0.00 41.49 3.61
1617 6362 2.623878 TAACGGCAGTTTGTCTTGGA 57.376 45.000 7.73 0.00 41.49 3.53
1618 6363 1.757682 AACGGCAGTTTGTCTTGGAA 58.242 45.000 0.00 0.00 37.26 3.53
1619 6364 1.021968 ACGGCAGTTTGTCTTGGAAC 58.978 50.000 0.00 0.00 0.00 3.62
1620 6365 0.041312 CGGCAGTTTGTCTTGGAACG 60.041 55.000 0.00 0.00 0.00 3.95
1621 6366 0.310854 GGCAGTTTGTCTTGGAACGG 59.689 55.000 0.00 0.00 0.00 4.44
1622 6367 1.305201 GCAGTTTGTCTTGGAACGGA 58.695 50.000 0.00 0.00 0.00 4.69
1623 6368 1.880027 GCAGTTTGTCTTGGAACGGAT 59.120 47.619 0.00 0.00 0.00 4.18
1624 6369 2.095718 GCAGTTTGTCTTGGAACGGATC 60.096 50.000 0.00 0.00 0.00 3.36
1625 6370 3.403038 CAGTTTGTCTTGGAACGGATCT 58.597 45.455 0.00 0.00 0.00 2.75
1626 6371 3.187227 CAGTTTGTCTTGGAACGGATCTG 59.813 47.826 0.00 0.00 0.00 2.90
1627 6372 3.071023 AGTTTGTCTTGGAACGGATCTGA 59.929 43.478 9.00 0.00 0.00 3.27
1628 6373 2.743636 TGTCTTGGAACGGATCTGAC 57.256 50.000 9.00 1.79 0.00 3.51
1629 6374 2.248248 TGTCTTGGAACGGATCTGACT 58.752 47.619 9.00 0.00 0.00 3.41
1630 6375 2.632996 TGTCTTGGAACGGATCTGACTT 59.367 45.455 9.00 0.00 0.00 3.01
1631 6376 3.071023 TGTCTTGGAACGGATCTGACTTT 59.929 43.478 9.00 0.00 0.00 2.66
1632 6377 4.282449 TGTCTTGGAACGGATCTGACTTTA 59.718 41.667 9.00 0.00 0.00 1.85
1633 6378 4.626172 GTCTTGGAACGGATCTGACTTTAC 59.374 45.833 9.00 0.00 0.00 2.01
1634 6379 4.282449 TCTTGGAACGGATCTGACTTTACA 59.718 41.667 9.00 0.00 0.00 2.41
1635 6380 4.610605 TGGAACGGATCTGACTTTACAA 57.389 40.909 9.00 0.00 0.00 2.41
1636 6381 4.312443 TGGAACGGATCTGACTTTACAAC 58.688 43.478 9.00 0.00 0.00 3.32
1637 6382 4.039973 TGGAACGGATCTGACTTTACAACT 59.960 41.667 9.00 0.00 0.00 3.16
1638 6383 4.389077 GGAACGGATCTGACTTTACAACTG 59.611 45.833 9.00 0.00 0.00 3.16
1639 6384 4.602340 ACGGATCTGACTTTACAACTGT 57.398 40.909 9.00 0.00 0.00 3.55
1640 6385 4.307432 ACGGATCTGACTTTACAACTGTG 58.693 43.478 9.00 0.00 0.00 3.66
1641 6386 4.038763 ACGGATCTGACTTTACAACTGTGA 59.961 41.667 9.00 0.00 0.00 3.58
1642 6387 5.171476 CGGATCTGACTTTACAACTGTGAT 58.829 41.667 0.00 0.00 0.00 3.06
1643 6388 5.062683 CGGATCTGACTTTACAACTGTGATG 59.937 44.000 0.00 0.00 0.00 3.07
1644 6389 5.163814 GGATCTGACTTTACAACTGTGATGC 60.164 44.000 0.00 0.00 0.00 3.91
1645 6390 4.065088 TCTGACTTTACAACTGTGATGCC 58.935 43.478 0.00 0.00 0.00 4.40
1646 6391 3.146066 TGACTTTACAACTGTGATGCCC 58.854 45.455 0.00 0.00 0.00 5.36
1647 6392 3.181445 TGACTTTACAACTGTGATGCCCT 60.181 43.478 0.00 0.00 0.00 5.19
1648 6393 3.149196 ACTTTACAACTGTGATGCCCTG 58.851 45.455 0.00 0.00 0.00 4.45
1649 6394 3.181445 ACTTTACAACTGTGATGCCCTGA 60.181 43.478 0.00 0.00 0.00 3.86
1650 6395 3.719268 TTACAACTGTGATGCCCTGAT 57.281 42.857 0.00 0.00 0.00 2.90
1651 6396 2.119801 ACAACTGTGATGCCCTGATC 57.880 50.000 0.00 0.00 0.00 2.92
1652 6397 1.352017 ACAACTGTGATGCCCTGATCA 59.648 47.619 0.00 0.00 0.00 2.92
1658 6403 2.812836 TGATGCCCTGATCACATGTT 57.187 45.000 0.00 0.00 0.00 2.71
1659 6404 3.090210 TGATGCCCTGATCACATGTTT 57.910 42.857 0.00 0.00 0.00 2.83
1660 6405 2.756207 TGATGCCCTGATCACATGTTTG 59.244 45.455 0.00 0.00 0.00 2.93
1661 6406 2.291209 TGCCCTGATCACATGTTTGT 57.709 45.000 0.00 0.00 36.15 2.83
1662 6407 3.431673 TGCCCTGATCACATGTTTGTA 57.568 42.857 0.00 0.00 33.76 2.41
1663 6408 3.966979 TGCCCTGATCACATGTTTGTAT 58.033 40.909 0.00 0.00 33.76 2.29
1664 6409 3.695556 TGCCCTGATCACATGTTTGTATG 59.304 43.478 0.00 0.00 33.76 2.39
1665 6410 3.696051 GCCCTGATCACATGTTTGTATGT 59.304 43.478 0.00 0.00 41.77 2.29
1666 6411 4.158394 GCCCTGATCACATGTTTGTATGTT 59.842 41.667 0.00 0.00 39.17 2.71
1667 6412 5.336690 GCCCTGATCACATGTTTGTATGTTT 60.337 40.000 0.00 0.00 39.17 2.83
1668 6413 6.690530 CCCTGATCACATGTTTGTATGTTTT 58.309 36.000 0.00 0.00 39.17 2.43
1669 6414 7.576666 GCCCTGATCACATGTTTGTATGTTTTA 60.577 37.037 0.00 0.00 39.17 1.52
1670 6415 8.303156 CCCTGATCACATGTTTGTATGTTTTAA 58.697 33.333 0.00 0.00 39.17 1.52
1671 6416 9.128107 CCTGATCACATGTTTGTATGTTTTAAC 57.872 33.333 0.00 0.00 39.17 2.01
1672 6417 9.676195 CTGATCACATGTTTGTATGTTTTAACA 57.324 29.630 0.00 0.00 39.17 2.41
1673 6418 9.676195 TGATCACATGTTTGTATGTTTTAACAG 57.324 29.630 0.00 0.00 39.17 3.16
1674 6419 7.922505 TCACATGTTTGTATGTTTTAACAGC 57.077 32.000 0.00 0.00 39.17 4.40
1675 6420 7.711846 TCACATGTTTGTATGTTTTAACAGCT 58.288 30.769 0.00 0.00 39.17 4.24
1676 6421 8.194104 TCACATGTTTGTATGTTTTAACAGCTT 58.806 29.630 0.00 0.00 39.17 3.74
1677 6422 8.816144 CACATGTTTGTATGTTTTAACAGCTTT 58.184 29.630 0.00 0.00 39.17 3.51
1678 6423 9.030301 ACATGTTTGTATGTTTTAACAGCTTTC 57.970 29.630 0.00 0.00 43.04 2.62
1679 6424 7.995463 TGTTTGTATGTTTTAACAGCTTTCC 57.005 32.000 1.50 0.00 43.04 3.13
1680 6425 7.777095 TGTTTGTATGTTTTAACAGCTTTCCT 58.223 30.769 1.50 0.00 43.04 3.36
1681 6426 8.254508 TGTTTGTATGTTTTAACAGCTTTCCTT 58.745 29.630 1.50 0.00 43.04 3.36
1682 6427 9.738832 GTTTGTATGTTTTAACAGCTTTCCTTA 57.261 29.630 1.50 0.00 43.04 2.69
1689 6434 9.738832 TGTTTTAACAGCTTTCCTTAATTGTAC 57.261 29.630 0.00 0.00 34.30 2.90
1690 6435 9.738832 GTTTTAACAGCTTTCCTTAATTGTACA 57.261 29.630 0.00 0.00 0.00 2.90
1770 6519 0.727398 GGCGCTGACATGGTTTACTC 59.273 55.000 7.64 0.00 0.00 2.59
1774 6523 3.682858 GCGCTGACATGGTTTACTCTAAA 59.317 43.478 0.00 0.00 0.00 1.85
1822 6606 6.519353 TTTGTACACACTCAAGTATGTTCG 57.481 37.500 0.00 0.00 36.93 3.95
1845 6629 2.373540 ATACGCCGTAAGTTGCTTGA 57.626 45.000 0.00 0.00 0.00 3.02
2046 6890 4.141018 ACCTATGTTTCTTGTTTCCAGGGT 60.141 41.667 0.00 0.00 0.00 4.34
2053 6897 4.715534 TCTTGTTTCCAGGGTTATGTGA 57.284 40.909 0.00 0.00 0.00 3.58
2258 7102 7.013655 GGTGAATGAGGTATAGCATTTGTTCAT 59.986 37.037 4.48 0.85 35.05 2.57
2591 7440 0.926155 GCCGCTACCGTTAAGCTTAC 59.074 55.000 5.45 0.99 37.85 2.34
2595 7444 1.922545 GCTACCGTTAAGCTTACGTGG 59.077 52.381 19.75 16.92 37.30 4.94
2604 7453 5.443693 CGTTAAGCTTACGTGGTGTTATGTC 60.444 44.000 5.45 0.00 34.47 3.06
2631 7480 2.848678 ACCTGTCCTATGCTGTCCTA 57.151 50.000 0.00 0.00 0.00 2.94
2632 7481 3.336509 ACCTGTCCTATGCTGTCCTAT 57.663 47.619 0.00 0.00 0.00 2.57
2633 7482 2.968574 ACCTGTCCTATGCTGTCCTATG 59.031 50.000 0.00 0.00 0.00 2.23
2635 7484 2.632028 CTGTCCTATGCTGTCCTATGCT 59.368 50.000 0.00 0.00 0.00 3.79
2637 7486 1.973515 TCCTATGCTGTCCTATGCTGG 59.026 52.381 0.00 0.00 0.00 4.85
2639 7488 2.028294 CCTATGCTGTCCTATGCTGGAG 60.028 54.545 0.00 0.00 36.69 3.86
2640 7489 1.504912 ATGCTGTCCTATGCTGGAGT 58.495 50.000 0.00 0.00 36.69 3.85
2641 7490 0.826715 TGCTGTCCTATGCTGGAGTC 59.173 55.000 0.00 0.00 36.69 3.36
2642 7491 1.118838 GCTGTCCTATGCTGGAGTCT 58.881 55.000 0.00 0.00 36.69 3.24
2646 7495 4.187694 CTGTCCTATGCTGGAGTCTTTTC 58.812 47.826 0.00 0.00 36.69 2.29
2682 7534 2.069273 CTACCTTTCTGTGGCTGAACG 58.931 52.381 0.00 0.00 0.00 3.95
2693 7552 3.044059 GCTGAACGTCCAGGCATGC 62.044 63.158 9.90 9.90 34.82 4.06
2725 7584 6.122277 ACTATTTGCTATGTGCCTGTGTTAT 58.878 36.000 0.00 0.00 42.00 1.89
2726 7585 4.700268 TTTGCTATGTGCCTGTGTTATG 57.300 40.909 0.00 0.00 42.00 1.90
2734 7593 5.528043 TGTGCCTGTGTTATGTGAAATTT 57.472 34.783 0.00 0.00 0.00 1.82
2779 7638 9.755804 TTGATGTGTGCTGATTATTGTTTTAAA 57.244 25.926 0.00 0.00 0.00 1.52
2866 7730 6.535274 AAATGTCAAAATTTGAAGCTCTGC 57.465 33.333 10.27 0.00 42.15 4.26
2909 7778 3.517296 TCATGAGCCTTTTGTTACCCA 57.483 42.857 0.00 0.00 0.00 4.51
2911 7780 4.016444 TCATGAGCCTTTTGTTACCCATC 58.984 43.478 0.00 0.00 0.00 3.51
2922 7791 4.035612 TGTTACCCATCAAATCGGGAAA 57.964 40.909 0.45 0.00 46.34 3.13
2923 7792 4.605183 TGTTACCCATCAAATCGGGAAAT 58.395 39.130 0.45 0.00 46.34 2.17
2924 7793 5.756918 TGTTACCCATCAAATCGGGAAATA 58.243 37.500 0.45 0.00 46.34 1.40
2925 7794 5.591067 TGTTACCCATCAAATCGGGAAATAC 59.409 40.000 0.45 0.00 46.34 1.89
2926 7795 4.519906 ACCCATCAAATCGGGAAATACT 57.480 40.909 0.45 0.00 46.34 2.12
2927 7796 4.867086 ACCCATCAAATCGGGAAATACTT 58.133 39.130 0.45 0.00 46.34 2.24
2928 7797 4.887655 ACCCATCAAATCGGGAAATACTTC 59.112 41.667 0.45 0.00 46.34 3.01
2929 7798 5.133221 CCCATCAAATCGGGAAATACTTCT 58.867 41.667 0.00 0.00 46.34 2.85
2930 7799 5.594317 CCCATCAAATCGGGAAATACTTCTT 59.406 40.000 0.00 0.00 46.34 2.52
2931 7800 6.096846 CCCATCAAATCGGGAAATACTTCTTT 59.903 38.462 0.00 0.00 46.34 2.52
2932 7801 7.196331 CCATCAAATCGGGAAATACTTCTTTC 58.804 38.462 0.00 0.00 34.95 2.62
2933 7802 6.417191 TCAAATCGGGAAATACTTCTTTCG 57.583 37.500 0.00 0.00 36.24 3.46
2934 7803 5.935789 TCAAATCGGGAAATACTTCTTTCGT 59.064 36.000 0.00 0.00 36.24 3.85
2935 7804 6.091713 TCAAATCGGGAAATACTTCTTTCGTC 59.908 38.462 0.00 0.00 36.24 4.20
2936 7805 3.853475 TCGGGAAATACTTCTTTCGTCC 58.147 45.455 0.00 0.00 36.24 4.79
2937 7806 3.512724 TCGGGAAATACTTCTTTCGTCCT 59.487 43.478 0.00 0.00 36.24 3.85
2938 7807 4.020839 TCGGGAAATACTTCTTTCGTCCTT 60.021 41.667 0.00 0.00 36.24 3.36
2939 7808 4.329256 CGGGAAATACTTCTTTCGTCCTTC 59.671 45.833 0.00 0.00 36.24 3.46
2940 7809 5.243207 GGGAAATACTTCTTTCGTCCTTCA 58.757 41.667 0.00 0.00 36.24 3.02
2941 7810 5.704053 GGGAAATACTTCTTTCGTCCTTCAA 59.296 40.000 0.00 0.00 36.24 2.69
2942 7811 6.206048 GGGAAATACTTCTTTCGTCCTTCAAA 59.794 38.462 0.00 0.00 36.24 2.69
2943 7812 7.298854 GGAAATACTTCTTTCGTCCTTCAAAG 58.701 38.462 0.00 0.00 36.24 2.77
2944 7813 7.172703 GGAAATACTTCTTTCGTCCTTCAAAGA 59.827 37.037 0.00 0.00 36.94 2.52
2945 7814 7.659652 AATACTTCTTTCGTCCTTCAAAGAG 57.340 36.000 0.00 0.00 39.28 2.85
2946 7815 5.024785 ACTTCTTTCGTCCTTCAAAGAGT 57.975 39.130 0.00 0.00 39.28 3.24
2947 7816 4.811557 ACTTCTTTCGTCCTTCAAAGAGTG 59.188 41.667 0.00 0.00 39.28 3.51
2948 7817 4.402056 TCTTTCGTCCTTCAAAGAGTGT 57.598 40.909 0.00 0.00 34.39 3.55
2949 7818 5.524971 TCTTTCGTCCTTCAAAGAGTGTA 57.475 39.130 0.00 0.00 34.39 2.90
2950 7819 6.097915 TCTTTCGTCCTTCAAAGAGTGTAT 57.902 37.500 0.00 0.00 34.39 2.29
2951 7820 6.522054 TCTTTCGTCCTTCAAAGAGTGTATT 58.478 36.000 0.00 0.00 34.39 1.89
2952 7821 6.990349 TCTTTCGTCCTTCAAAGAGTGTATTT 59.010 34.615 0.00 0.00 34.39 1.40
2953 7822 7.497909 TCTTTCGTCCTTCAAAGAGTGTATTTT 59.502 33.333 0.00 0.00 34.39 1.82
2954 7823 6.780706 TCGTCCTTCAAAGAGTGTATTTTC 57.219 37.500 0.00 0.00 0.00 2.29
2955 7824 6.285224 TCGTCCTTCAAAGAGTGTATTTTCA 58.715 36.000 0.00 0.00 0.00 2.69
2956 7825 6.764085 TCGTCCTTCAAAGAGTGTATTTTCAA 59.236 34.615 0.00 0.00 0.00 2.69
2957 7826 6.851330 CGTCCTTCAAAGAGTGTATTTTCAAC 59.149 38.462 0.00 0.00 0.00 3.18
2958 7827 7.254795 CGTCCTTCAAAGAGTGTATTTTCAACT 60.255 37.037 0.00 0.00 0.00 3.16
2959 7828 8.406297 GTCCTTCAAAGAGTGTATTTTCAACTT 58.594 33.333 0.00 0.00 0.00 2.66
2960 7829 8.966868 TCCTTCAAAGAGTGTATTTTCAACTTT 58.033 29.630 0.00 0.00 31.76 2.66
2961 7830 9.237846 CCTTCAAAGAGTGTATTTTCAACTTTC 57.762 33.333 0.00 0.00 30.44 2.62
2964 7833 9.787532 TCAAAGAGTGTATTTTCAACTTTCTTG 57.212 29.630 0.00 0.00 30.44 3.02
2965 7834 9.787532 CAAAGAGTGTATTTTCAACTTTCTTGA 57.212 29.630 0.00 0.00 30.44 3.02
2967 7836 8.964476 AGAGTGTATTTTCAACTTTCTTGAGA 57.036 30.769 0.00 0.00 0.00 3.27
2968 7837 9.396022 AGAGTGTATTTTCAACTTTCTTGAGAA 57.604 29.630 0.00 0.00 0.00 2.87
2969 7838 9.657121 GAGTGTATTTTCAACTTTCTTGAGAAG 57.343 33.333 0.00 0.00 35.21 2.85
2970 7839 9.178758 AGTGTATTTTCAACTTTCTTGAGAAGT 57.821 29.630 0.00 0.00 35.21 3.01
2971 7840 9.439537 GTGTATTTTCAACTTTCTTGAGAAGTC 57.560 33.333 0.00 0.00 35.21 3.01
2972 7841 9.173021 TGTATTTTCAACTTTCTTGAGAAGTCA 57.827 29.630 0.00 0.00 35.21 3.41
2976 7845 9.927668 TTTTCAACTTTCTTGAGAAGTCAATTT 57.072 25.926 0.00 0.00 41.96 1.82
2977 7846 9.927668 TTTCAACTTTCTTGAGAAGTCAATTTT 57.072 25.926 0.00 0.00 41.96 1.82
2978 7847 9.927668 TTCAACTTTCTTGAGAAGTCAATTTTT 57.072 25.926 0.00 0.00 41.96 1.94
3038 7907 9.329913 CAATATTTATGCCGTCAAATTAGTAGC 57.670 33.333 0.00 0.00 0.00 3.58
3039 7908 5.398176 TTTATGCCGTCAAATTAGTAGCG 57.602 39.130 0.00 0.00 0.00 4.26
3040 7909 2.373540 TGCCGTCAAATTAGTAGCGT 57.626 45.000 0.00 0.00 0.00 5.07
3041 7910 2.690786 TGCCGTCAAATTAGTAGCGTT 58.309 42.857 0.00 0.00 0.00 4.84
3042 7911 3.068560 TGCCGTCAAATTAGTAGCGTTT 58.931 40.909 0.00 0.00 0.00 3.60
3043 7912 3.120477 TGCCGTCAAATTAGTAGCGTTTG 60.120 43.478 0.00 0.00 34.90 2.93
3044 7913 3.726782 GCCGTCAAATTAGTAGCGTTTGG 60.727 47.826 0.00 0.00 34.48 3.28
3045 7914 3.434299 CCGTCAAATTAGTAGCGTTTGGT 59.566 43.478 0.00 0.00 34.48 3.67
3046 7915 4.626604 CCGTCAAATTAGTAGCGTTTGGTA 59.373 41.667 0.00 0.00 34.48 3.25
3047 7916 5.120519 CCGTCAAATTAGTAGCGTTTGGTAA 59.879 40.000 0.00 0.00 34.48 2.85
3048 7917 6.183360 CCGTCAAATTAGTAGCGTTTGGTAAT 60.183 38.462 0.00 0.00 34.48 1.89
3049 7918 6.681178 CGTCAAATTAGTAGCGTTTGGTAATG 59.319 38.462 0.00 0.00 34.48 1.90
3050 7919 7.412129 CGTCAAATTAGTAGCGTTTGGTAATGA 60.412 37.037 0.00 0.00 34.48 2.57
3051 7920 8.395633 GTCAAATTAGTAGCGTTTGGTAATGAT 58.604 33.333 0.00 0.00 34.48 2.45
3052 7921 9.602568 TCAAATTAGTAGCGTTTGGTAATGATA 57.397 29.630 0.00 0.00 34.48 2.15
3160 8029 8.379457 ACTCTTTAACAAAGTTGGAGATACAC 57.621 34.615 12.54 0.00 39.52 2.90
3161 8030 8.211629 ACTCTTTAACAAAGTTGGAGATACACT 58.788 33.333 12.54 0.00 39.52 3.55
3162 8031 8.974060 TCTTTAACAAAGTTGGAGATACACTT 57.026 30.769 0.00 0.00 39.52 3.16
3163 8032 9.403583 TCTTTAACAAAGTTGGAGATACACTTT 57.596 29.630 0.00 0.00 39.52 2.66
3197 8066 4.789012 GAGCATCTAATCTCTCCTCCTG 57.211 50.000 0.00 0.00 0.00 3.86
3198 8067 4.406456 GAGCATCTAATCTCTCCTCCTGA 58.594 47.826 0.00 0.00 0.00 3.86
3199 8068 5.014534 AGCATCTAATCTCTCCTCCTGAT 57.985 43.478 0.00 0.00 0.00 2.90
3200 8069 5.405279 AGCATCTAATCTCTCCTCCTGATT 58.595 41.667 0.00 0.00 35.08 2.57
3201 8070 5.845614 AGCATCTAATCTCTCCTCCTGATTT 59.154 40.000 0.00 0.00 33.24 2.17
3202 8071 6.329723 AGCATCTAATCTCTCCTCCTGATTTT 59.670 38.462 0.00 0.00 33.24 1.82
3203 8072 7.512058 AGCATCTAATCTCTCCTCCTGATTTTA 59.488 37.037 0.00 0.00 33.24 1.52
3204 8073 8.153550 GCATCTAATCTCTCCTCCTGATTTTAA 58.846 37.037 0.00 0.00 33.24 1.52
3210 8079 8.977267 ATCTCTCCTCCTGATTTTAAATGAAG 57.023 34.615 0.00 0.00 0.00 3.02
3211 8080 7.341805 TCTCTCCTCCTGATTTTAAATGAAGG 58.658 38.462 8.82 8.82 0.00 3.46
3212 8081 6.426587 TCTCCTCCTGATTTTAAATGAAGGG 58.573 40.000 13.08 6.76 0.00 3.95
3213 8082 6.011628 TCTCCTCCTGATTTTAAATGAAGGGT 60.012 38.462 13.08 0.00 0.00 4.34
3214 8083 5.951747 TCCTCCTGATTTTAAATGAAGGGTG 59.048 40.000 13.08 8.42 0.00 4.61
3215 8084 5.127682 CCTCCTGATTTTAAATGAAGGGTGG 59.872 44.000 13.08 11.89 0.00 4.61
3216 8085 5.650283 TCCTGATTTTAAATGAAGGGTGGT 58.350 37.500 13.08 0.00 0.00 4.16
3217 8086 6.795590 TCCTGATTTTAAATGAAGGGTGGTA 58.204 36.000 13.08 0.00 0.00 3.25
3218 8087 6.661805 TCCTGATTTTAAATGAAGGGTGGTAC 59.338 38.462 13.08 0.00 0.00 3.34
3219 8088 6.404293 CCTGATTTTAAATGAAGGGTGGTACG 60.404 42.308 0.00 0.00 0.00 3.67
3220 8089 6.005198 TGATTTTAAATGAAGGGTGGTACGT 58.995 36.000 0.00 0.00 0.00 3.57
3221 8090 7.166851 TGATTTTAAATGAAGGGTGGTACGTA 58.833 34.615 0.00 0.00 0.00 3.57
3222 8091 7.830201 TGATTTTAAATGAAGGGTGGTACGTAT 59.170 33.333 0.00 0.00 0.00 3.06
3223 8092 7.614124 TTTTAAATGAAGGGTGGTACGTATC 57.386 36.000 0.00 0.00 0.00 2.24
3224 8093 4.829872 AAATGAAGGGTGGTACGTATCA 57.170 40.909 3.91 3.91 0.00 2.15
3225 8094 5.367945 AAATGAAGGGTGGTACGTATCAT 57.632 39.130 12.49 5.81 0.00 2.45
3226 8095 5.367945 AATGAAGGGTGGTACGTATCATT 57.632 39.130 12.49 11.52 32.75 2.57
3227 8096 4.395959 TGAAGGGTGGTACGTATCATTC 57.604 45.455 12.49 12.14 0.00 2.67
3228 8097 3.770388 TGAAGGGTGGTACGTATCATTCA 59.230 43.478 12.49 14.55 0.00 2.57
3229 8098 4.407621 TGAAGGGTGGTACGTATCATTCAT 59.592 41.667 12.49 2.74 0.00 2.57
3230 8099 4.336889 AGGGTGGTACGTATCATTCATG 57.663 45.455 12.49 0.00 0.00 3.07
3231 8100 3.071023 AGGGTGGTACGTATCATTCATGG 59.929 47.826 12.49 0.00 0.00 3.66
3232 8101 3.399330 GGTGGTACGTATCATTCATGGG 58.601 50.000 12.49 0.00 0.00 4.00
3233 8102 3.181458 GGTGGTACGTATCATTCATGGGT 60.181 47.826 12.49 0.00 0.00 4.51
3234 8103 4.056050 GTGGTACGTATCATTCATGGGTC 58.944 47.826 12.49 0.00 0.00 4.46
3235 8104 3.707102 TGGTACGTATCATTCATGGGTCA 59.293 43.478 3.91 0.00 0.00 4.02
3236 8105 4.202212 TGGTACGTATCATTCATGGGTCAG 60.202 45.833 3.91 0.00 0.00 3.51
3237 8106 4.038763 GGTACGTATCATTCATGGGTCAGA 59.961 45.833 0.00 0.00 0.00 3.27
3238 8107 4.060038 ACGTATCATTCATGGGTCAGAC 57.940 45.455 0.00 0.00 0.00 3.51
3239 8108 3.181465 ACGTATCATTCATGGGTCAGACC 60.181 47.826 11.70 11.70 37.60 3.85
3240 8109 3.070159 CGTATCATTCATGGGTCAGACCT 59.930 47.826 19.57 0.00 38.64 3.85
3241 8110 3.572632 ATCATTCATGGGTCAGACCTG 57.427 47.619 19.57 10.83 38.64 4.00
3242 8111 2.550175 TCATTCATGGGTCAGACCTGA 58.450 47.619 19.57 13.05 38.64 3.86
3243 8112 3.117745 TCATTCATGGGTCAGACCTGAT 58.882 45.455 19.57 8.98 42.18 2.90
3244 8113 3.135348 TCATTCATGGGTCAGACCTGATC 59.865 47.826 19.57 3.07 42.18 2.92
3245 8114 2.557555 TCATGGGTCAGACCTGATCT 57.442 50.000 19.57 0.00 42.18 2.75
3280 8149 5.975988 TTTCCAATAGAGGAATAGCCACT 57.024 39.130 0.00 0.00 46.45 4.00
3281 8150 4.963318 TCCAATAGAGGAATAGCCACTG 57.037 45.455 0.00 0.00 38.15 3.66
3282 8151 3.648067 TCCAATAGAGGAATAGCCACTGG 59.352 47.826 0.00 0.00 38.15 4.00
3283 8152 6.029018 TCCAATAGAGGAATAGCCACTGGC 62.029 50.000 12.63 12.63 41.37 4.85
3294 8163 2.701587 CCACTGGCAACGTCTTTCA 58.298 52.632 0.00 0.00 42.51 2.69
3295 8164 0.588252 CCACTGGCAACGTCTTTCAG 59.412 55.000 0.00 0.00 42.51 3.02
3296 8165 1.581934 CACTGGCAACGTCTTTCAGA 58.418 50.000 12.79 0.00 42.51 3.27
3297 8166 1.261619 CACTGGCAACGTCTTTCAGAC 59.738 52.381 12.79 0.00 41.71 3.51
3298 8167 1.134521 ACTGGCAACGTCTTTCAGACA 60.135 47.619 12.79 0.00 45.30 3.41
3299 8168 2.146342 CTGGCAACGTCTTTCAGACAT 58.854 47.619 4.82 0.00 45.30 3.06
3300 8169 3.244078 ACTGGCAACGTCTTTCAGACATA 60.244 43.478 12.79 0.00 45.30 2.29
3301 8170 3.325870 TGGCAACGTCTTTCAGACATAG 58.674 45.455 4.82 0.00 45.30 2.23
3302 8171 3.006430 TGGCAACGTCTTTCAGACATAGA 59.994 43.478 4.82 0.00 45.30 1.98
3303 8172 3.368236 GGCAACGTCTTTCAGACATAGAC 59.632 47.826 4.82 0.00 45.30 2.59
3310 8179 4.737765 GTCTTTCAGACATAGACGATGAGC 59.262 45.833 2.24 0.00 44.45 4.26
3311 8180 6.507470 GTCTTTCAGACATAGACGATGAGCG 61.507 48.000 2.24 0.00 44.45 5.03
3312 8181 1.604278 TCAGACATAGACGATGAGCGG 59.396 52.381 2.24 0.00 46.49 5.52
3313 8182 0.955178 AGACATAGACGATGAGCGGG 59.045 55.000 2.24 0.00 46.49 6.13
3314 8183 0.952280 GACATAGACGATGAGCGGGA 59.048 55.000 2.24 0.00 46.49 5.14
3315 8184 1.337071 GACATAGACGATGAGCGGGAA 59.663 52.381 2.24 0.00 46.49 3.97
3316 8185 1.338337 ACATAGACGATGAGCGGGAAG 59.662 52.381 2.24 0.00 46.49 3.46
3317 8186 0.962489 ATAGACGATGAGCGGGAAGG 59.038 55.000 0.00 0.00 46.49 3.46
3318 8187 0.395311 TAGACGATGAGCGGGAAGGT 60.395 55.000 0.00 0.00 46.49 3.50
3319 8188 1.519455 GACGATGAGCGGGAAGGTG 60.519 63.158 0.00 0.00 46.49 4.00
3320 8189 2.202932 CGATGAGCGGGAAGGTGG 60.203 66.667 0.00 0.00 36.03 4.61
3321 8190 2.721167 CGATGAGCGGGAAGGTGGA 61.721 63.158 0.00 0.00 36.03 4.02
3322 8191 1.144936 GATGAGCGGGAAGGTGGAG 59.855 63.158 0.00 0.00 0.00 3.86
3323 8192 2.317149 GATGAGCGGGAAGGTGGAGG 62.317 65.000 0.00 0.00 0.00 4.30
3324 8193 4.475135 GAGCGGGAAGGTGGAGGC 62.475 72.222 0.00 0.00 0.00 4.70
3327 8196 4.760047 CGGGAAGGTGGAGGCGTG 62.760 72.222 0.00 0.00 0.00 5.34
3328 8197 3.319198 GGGAAGGTGGAGGCGTGA 61.319 66.667 0.00 0.00 0.00 4.35
3329 8198 2.670148 GGGAAGGTGGAGGCGTGAT 61.670 63.158 0.00 0.00 0.00 3.06
3330 8199 1.335132 GGGAAGGTGGAGGCGTGATA 61.335 60.000 0.00 0.00 0.00 2.15
3331 8200 0.179081 GGAAGGTGGAGGCGTGATAC 60.179 60.000 0.00 0.00 0.00 2.24
3332 8201 0.824759 GAAGGTGGAGGCGTGATACT 59.175 55.000 0.00 0.00 0.00 2.12
3333 8202 0.824759 AAGGTGGAGGCGTGATACTC 59.175 55.000 0.00 0.00 0.00 2.59
3334 8203 0.033011 AGGTGGAGGCGTGATACTCT 60.033 55.000 0.00 0.00 34.22 3.24
3335 8204 0.824759 GGTGGAGGCGTGATACTCTT 59.175 55.000 0.00 0.00 34.22 2.85
3336 8205 1.471676 GGTGGAGGCGTGATACTCTTG 60.472 57.143 0.00 0.00 34.22 3.02
3337 8206 0.824109 TGGAGGCGTGATACTCTTGG 59.176 55.000 0.00 0.00 34.22 3.61
3338 8207 0.105039 GGAGGCGTGATACTCTTGGG 59.895 60.000 0.00 0.00 34.22 4.12
3339 8208 0.105039 GAGGCGTGATACTCTTGGGG 59.895 60.000 0.00 0.00 0.00 4.96
3340 8209 0.617820 AGGCGTGATACTCTTGGGGT 60.618 55.000 0.00 0.00 0.00 4.95
3341 8210 0.252197 GGCGTGATACTCTTGGGGTT 59.748 55.000 0.00 0.00 0.00 4.11
3342 8211 1.339727 GGCGTGATACTCTTGGGGTTT 60.340 52.381 0.00 0.00 0.00 3.27
3343 8212 2.433436 GCGTGATACTCTTGGGGTTTT 58.567 47.619 0.00 0.00 0.00 2.43
3344 8213 2.161609 GCGTGATACTCTTGGGGTTTTG 59.838 50.000 0.00 0.00 0.00 2.44
3345 8214 3.408634 CGTGATACTCTTGGGGTTTTGT 58.591 45.455 0.00 0.00 0.00 2.83
3346 8215 3.188460 CGTGATACTCTTGGGGTTTTGTG 59.812 47.826 0.00 0.00 0.00 3.33
3347 8216 4.394729 GTGATACTCTTGGGGTTTTGTGA 58.605 43.478 0.00 0.00 0.00 3.58
3348 8217 5.010282 GTGATACTCTTGGGGTTTTGTGAT 58.990 41.667 0.00 0.00 0.00 3.06
3349 8218 5.476945 GTGATACTCTTGGGGTTTTGTGATT 59.523 40.000 0.00 0.00 0.00 2.57
3350 8219 5.710099 TGATACTCTTGGGGTTTTGTGATTC 59.290 40.000 0.00 0.00 0.00 2.52
3351 8220 4.184649 ACTCTTGGGGTTTTGTGATTCT 57.815 40.909 0.00 0.00 0.00 2.40
3352 8221 4.546674 ACTCTTGGGGTTTTGTGATTCTT 58.453 39.130 0.00 0.00 0.00 2.52
3353 8222 4.342092 ACTCTTGGGGTTTTGTGATTCTTG 59.658 41.667 0.00 0.00 0.00 3.02
3354 8223 4.285863 TCTTGGGGTTTTGTGATTCTTGT 58.714 39.130 0.00 0.00 0.00 3.16
3355 8224 4.340950 TCTTGGGGTTTTGTGATTCTTGTC 59.659 41.667 0.00 0.00 0.00 3.18
3356 8225 2.621055 TGGGGTTTTGTGATTCTTGTCG 59.379 45.455 0.00 0.00 0.00 4.35
3357 8226 2.607038 GGGGTTTTGTGATTCTTGTCGC 60.607 50.000 0.00 0.00 0.00 5.19
3358 8227 2.293399 GGGTTTTGTGATTCTTGTCGCT 59.707 45.455 0.00 0.00 0.00 4.93
3359 8228 3.243401 GGGTTTTGTGATTCTTGTCGCTT 60.243 43.478 0.00 0.00 0.00 4.68
3360 8229 3.975035 GGTTTTGTGATTCTTGTCGCTTC 59.025 43.478 0.00 0.00 0.00 3.86
3361 8230 4.261197 GGTTTTGTGATTCTTGTCGCTTCT 60.261 41.667 0.00 0.00 0.00 2.85
3362 8231 4.732285 TTTGTGATTCTTGTCGCTTCTC 57.268 40.909 0.00 0.00 0.00 2.87
3363 8232 3.385193 TGTGATTCTTGTCGCTTCTCA 57.615 42.857 0.00 0.00 0.00 3.27
3364 8233 3.059884 TGTGATTCTTGTCGCTTCTCAC 58.940 45.455 0.00 0.00 33.79 3.51
3365 8234 3.059884 GTGATTCTTGTCGCTTCTCACA 58.940 45.455 0.00 0.00 33.49 3.58
3366 8235 3.494626 GTGATTCTTGTCGCTTCTCACAA 59.505 43.478 0.00 0.00 33.49 3.33
3367 8236 4.024893 GTGATTCTTGTCGCTTCTCACAAA 60.025 41.667 0.00 0.00 32.16 2.83
3368 8237 4.756642 TGATTCTTGTCGCTTCTCACAAAT 59.243 37.500 0.00 0.00 32.16 2.32
3369 8238 5.931724 TGATTCTTGTCGCTTCTCACAAATA 59.068 36.000 0.00 0.00 32.16 1.40
3370 8239 6.426633 TGATTCTTGTCGCTTCTCACAAATAA 59.573 34.615 0.00 0.00 32.16 1.40
3371 8240 6.612247 TTCTTGTCGCTTCTCACAAATAAA 57.388 33.333 0.00 0.00 32.16 1.40
3372 8241 6.228273 TCTTGTCGCTTCTCACAAATAAAG 57.772 37.500 0.00 0.00 32.16 1.85
3373 8242 4.404507 TGTCGCTTCTCACAAATAAAGC 57.595 40.909 0.00 0.00 40.50 3.51
3374 8243 4.065088 TGTCGCTTCTCACAAATAAAGCT 58.935 39.130 4.65 0.00 41.47 3.74
3375 8244 4.515191 TGTCGCTTCTCACAAATAAAGCTT 59.485 37.500 0.00 0.00 41.47 3.74
3376 8245 5.699001 TGTCGCTTCTCACAAATAAAGCTTA 59.301 36.000 0.00 0.00 41.47 3.09
3377 8246 6.371548 TGTCGCTTCTCACAAATAAAGCTTAT 59.628 34.615 0.00 0.00 41.47 1.73
3378 8247 7.547722 TGTCGCTTCTCACAAATAAAGCTTATA 59.452 33.333 0.00 0.00 41.47 0.98
3379 8248 8.058915 GTCGCTTCTCACAAATAAAGCTTATAG 58.941 37.037 0.00 0.00 41.47 1.31
3380 8249 7.764443 TCGCTTCTCACAAATAAAGCTTATAGT 59.236 33.333 0.00 0.00 41.47 2.12
3381 8250 7.848051 CGCTTCTCACAAATAAAGCTTATAGTG 59.152 37.037 0.00 5.31 41.47 2.74
3382 8251 8.125448 GCTTCTCACAAATAAAGCTTATAGTGG 58.875 37.037 0.00 0.00 40.68 4.00
3383 8252 9.383519 CTTCTCACAAATAAAGCTTATAGTGGA 57.616 33.333 0.00 2.77 0.00 4.02
3384 8253 8.948631 TCTCACAAATAAAGCTTATAGTGGAG 57.051 34.615 0.00 2.61 0.00 3.86
3385 8254 7.987458 TCTCACAAATAAAGCTTATAGTGGAGG 59.013 37.037 0.00 0.96 0.00 4.30
3386 8255 7.630082 TCACAAATAAAGCTTATAGTGGAGGT 58.370 34.615 0.00 0.00 0.00 3.85
3387 8256 7.769044 TCACAAATAAAGCTTATAGTGGAGGTC 59.231 37.037 0.00 0.00 0.00 3.85
3388 8257 6.761714 ACAAATAAAGCTTATAGTGGAGGTCG 59.238 38.462 0.00 0.00 0.00 4.79
3389 8258 3.821421 AAAGCTTATAGTGGAGGTCGG 57.179 47.619 0.00 0.00 0.00 4.79
3390 8259 2.456073 AGCTTATAGTGGAGGTCGGT 57.544 50.000 0.00 0.00 0.00 4.69
3391 8260 2.748388 AGCTTATAGTGGAGGTCGGTT 58.252 47.619 0.00 0.00 0.00 4.44
3392 8261 3.907221 AGCTTATAGTGGAGGTCGGTTA 58.093 45.455 0.00 0.00 0.00 2.85
3393 8262 3.890147 AGCTTATAGTGGAGGTCGGTTAG 59.110 47.826 0.00 0.00 0.00 2.34
3394 8263 3.635836 GCTTATAGTGGAGGTCGGTTAGT 59.364 47.826 0.00 0.00 0.00 2.24
3395 8264 4.499357 GCTTATAGTGGAGGTCGGTTAGTG 60.499 50.000 0.00 0.00 0.00 2.74
3396 8265 1.843368 TAGTGGAGGTCGGTTAGTGG 58.157 55.000 0.00 0.00 0.00 4.00
3397 8266 1.079336 GTGGAGGTCGGTTAGTGGC 60.079 63.158 0.00 0.00 0.00 5.01
3398 8267 1.534476 TGGAGGTCGGTTAGTGGCA 60.534 57.895 0.00 0.00 0.00 4.92
3399 8268 0.907704 TGGAGGTCGGTTAGTGGCAT 60.908 55.000 0.00 0.00 0.00 4.40
3400 8269 1.117150 GGAGGTCGGTTAGTGGCATA 58.883 55.000 0.00 0.00 0.00 3.14
3401 8270 1.483415 GGAGGTCGGTTAGTGGCATAA 59.517 52.381 0.00 0.00 0.00 1.90
3402 8271 2.093341 GGAGGTCGGTTAGTGGCATAAA 60.093 50.000 0.00 0.00 0.00 1.40
3403 8272 3.602483 GAGGTCGGTTAGTGGCATAAAA 58.398 45.455 0.00 0.00 0.00 1.52
3404 8273 4.004982 GAGGTCGGTTAGTGGCATAAAAA 58.995 43.478 0.00 0.00 0.00 1.94
3405 8274 4.595986 AGGTCGGTTAGTGGCATAAAAAT 58.404 39.130 0.00 0.00 0.00 1.82
3406 8275 4.398044 AGGTCGGTTAGTGGCATAAAAATG 59.602 41.667 0.00 0.00 0.00 2.32
3407 8276 4.396790 GGTCGGTTAGTGGCATAAAAATGA 59.603 41.667 0.00 0.00 0.00 2.57
3408 8277 5.067283 GGTCGGTTAGTGGCATAAAAATGAT 59.933 40.000 0.00 0.00 0.00 2.45
3409 8278 5.971202 GTCGGTTAGTGGCATAAAAATGATG 59.029 40.000 0.00 0.00 0.00 3.07
3410 8279 5.650266 TCGGTTAGTGGCATAAAAATGATGT 59.350 36.000 0.00 0.00 0.00 3.06
3411 8280 6.824196 TCGGTTAGTGGCATAAAAATGATGTA 59.176 34.615 0.00 0.00 0.00 2.29
3412 8281 7.337184 TCGGTTAGTGGCATAAAAATGATGTAA 59.663 33.333 0.00 0.00 0.00 2.41
3413 8282 8.134895 CGGTTAGTGGCATAAAAATGATGTAAT 58.865 33.333 0.00 0.00 0.00 1.89
3414 8283 9.816354 GGTTAGTGGCATAAAAATGATGTAATT 57.184 29.630 0.00 0.00 0.00 1.40
3490 8359 8.667592 AACTAAACTGATACTCCTTAAGGTCT 57.332 34.615 21.04 9.78 36.34 3.85
3491 8360 9.765295 AACTAAACTGATACTCCTTAAGGTCTA 57.235 33.333 21.04 11.57 36.34 2.59
3492 8361 9.765295 ACTAAACTGATACTCCTTAAGGTCTAA 57.235 33.333 21.04 6.27 36.34 2.10
3496 8365 9.710818 AACTGATACTCCTTAAGGTCTAATACA 57.289 33.333 21.04 12.15 36.34 2.29
3497 8366 9.884814 ACTGATACTCCTTAAGGTCTAATACAT 57.115 33.333 21.04 4.93 36.34 2.29
3547 8416 8.854979 TGTTAAAGCAACAATATATGACATGC 57.145 30.769 0.00 5.40 44.20 4.06
3548 8417 8.465201 TGTTAAAGCAACAATATATGACATGCA 58.535 29.630 12.66 0.00 44.20 3.96
3549 8418 9.299963 GTTAAAGCAACAATATATGACATGCAA 57.700 29.630 12.66 0.00 38.32 4.08
3550 8419 7.760131 AAAGCAACAATATATGACATGCAAC 57.240 32.000 12.66 0.00 38.32 4.17
3551 8420 6.704289 AGCAACAATATATGACATGCAACT 57.296 33.333 12.66 0.00 38.32 3.16
3552 8421 7.104043 AGCAACAATATATGACATGCAACTT 57.896 32.000 12.66 0.00 38.32 2.66
3553 8422 8.224389 AGCAACAATATATGACATGCAACTTA 57.776 30.769 12.66 0.00 38.32 2.24
3554 8423 8.131100 AGCAACAATATATGACATGCAACTTAC 58.869 33.333 12.66 0.00 38.32 2.34
3555 8424 7.914871 GCAACAATATATGACATGCAACTTACA 59.085 33.333 0.00 0.00 36.96 2.41
3556 8425 9.225201 CAACAATATATGACATGCAACTTACAC 57.775 33.333 0.00 0.00 0.00 2.90
3557 8426 8.504812 ACAATATATGACATGCAACTTACACA 57.495 30.769 0.00 0.00 0.00 3.72
3558 8427 8.955388 ACAATATATGACATGCAACTTACACAA 58.045 29.630 0.00 0.00 0.00 3.33
3559 8428 9.786105 CAATATATGACATGCAACTTACACAAA 57.214 29.630 0.00 0.00 0.00 2.83
3561 8430 3.963665 TGACATGCAACTTACACAAAGC 58.036 40.909 0.00 0.00 38.93 3.51
3562 8431 3.379688 TGACATGCAACTTACACAAAGCA 59.620 39.130 0.00 0.00 38.93 3.91
3563 8432 3.705604 ACATGCAACTTACACAAAGCAC 58.294 40.909 0.00 0.00 38.93 4.40
3564 8433 3.130164 ACATGCAACTTACACAAAGCACA 59.870 39.130 0.00 0.00 38.93 4.57
3565 8434 3.143807 TGCAACTTACACAAAGCACAC 57.856 42.857 0.00 0.00 38.93 3.82
3566 8435 2.159310 TGCAACTTACACAAAGCACACC 60.159 45.455 0.00 0.00 38.93 4.16
3567 8436 2.715268 CAACTTACACAAAGCACACCG 58.285 47.619 0.00 0.00 38.93 4.94
3568 8437 2.032680 ACTTACACAAAGCACACCGT 57.967 45.000 0.00 0.00 38.93 4.83
3569 8438 1.937899 ACTTACACAAAGCACACCGTC 59.062 47.619 0.00 0.00 38.93 4.79
3570 8439 1.937223 CTTACACAAAGCACACCGTCA 59.063 47.619 0.00 0.00 0.00 4.35
3571 8440 2.025589 TACACAAAGCACACCGTCAA 57.974 45.000 0.00 0.00 0.00 3.18
3572 8441 1.169577 ACACAAAGCACACCGTCAAA 58.830 45.000 0.00 0.00 0.00 2.69
3573 8442 1.748493 ACACAAAGCACACCGTCAAAT 59.252 42.857 0.00 0.00 0.00 2.32
3574 8443 2.165437 ACACAAAGCACACCGTCAAATT 59.835 40.909 0.00 0.00 0.00 1.82
3575 8444 2.788786 CACAAAGCACACCGTCAAATTC 59.211 45.455 0.00 0.00 0.00 2.17
3576 8445 2.043411 CAAAGCACACCGTCAAATTCG 58.957 47.619 0.00 0.00 0.00 3.34
3577 8446 1.305201 AAGCACACCGTCAAATTCGT 58.695 45.000 0.00 0.00 0.00 3.85
3578 8447 2.157834 AGCACACCGTCAAATTCGTA 57.842 45.000 0.00 0.00 0.00 3.43
3579 8448 2.695359 AGCACACCGTCAAATTCGTAT 58.305 42.857 0.00 0.00 0.00 3.06
3580 8449 2.415168 AGCACACCGTCAAATTCGTATG 59.585 45.455 0.00 0.00 0.00 2.39
3581 8450 2.158841 GCACACCGTCAAATTCGTATGT 59.841 45.455 0.00 0.00 0.00 2.29
3582 8451 3.731855 CACACCGTCAAATTCGTATGTG 58.268 45.455 0.00 0.00 37.26 3.21
3583 8452 3.430556 CACACCGTCAAATTCGTATGTGA 59.569 43.478 11.25 0.00 41.53 3.58
3584 8453 4.059511 ACACCGTCAAATTCGTATGTGAA 58.940 39.130 0.00 0.00 29.80 3.18
3585 8454 4.512198 ACACCGTCAAATTCGTATGTGAAA 59.488 37.500 0.00 0.00 29.80 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 1.112315 AGCGCCTCCTCTCCATACTG 61.112 60.000 2.29 0.00 0.00 2.74
64 65 2.478872 AATCAAGGATCTCTCCCCGA 57.521 50.000 0.00 0.00 43.21 5.14
99 100 1.153107 CATCTTGCTCCGCCCATGA 60.153 57.895 0.00 0.00 0.00 3.07
109 110 2.803030 ATTGTGGAGCTCATCTTGCT 57.197 45.000 17.19 0.00 44.24 3.91
113 114 2.172293 GGGAGAATTGTGGAGCTCATCT 59.828 50.000 17.19 8.39 0.00 2.90
157 158 1.986632 AAACGACCGTGGGGGAACTT 61.987 55.000 0.00 0.00 39.97 2.66
607 608 2.429930 CTGCCAAACTCCACCCGA 59.570 61.111 0.00 0.00 0.00 5.14
610 611 3.365265 CCGCTGCCAAACTCCACC 61.365 66.667 0.00 0.00 0.00 4.61
697 698 6.458232 AAGAGCTCAATAAGACATACTCGT 57.542 37.500 17.77 0.00 0.00 4.18
918 5548 0.108329 GTTTCGAAGATGCGGGGAGA 60.108 55.000 0.00 0.00 35.04 3.71
1032 5668 4.918201 GGCGAGATTGCGGGGGAG 62.918 72.222 0.00 0.00 35.06 4.30
1035 5671 3.976701 AACAGGCGAGATTGCGGGG 62.977 63.158 0.00 0.00 35.06 5.73
1063 5699 0.776451 GAGTGCGCGATAATACGTGG 59.224 55.000 12.10 0.00 42.78 4.94
1079 5715 2.607187 GACGAATCCATCACAACGAGT 58.393 47.619 0.00 0.00 0.00 4.18
1270 5906 7.339482 GGATCTAAGAGATAAACCAAACCTGT 58.661 38.462 0.00 0.00 34.53 4.00
1454 6095 7.951591 ACTTGCATCAACTAAAACTAAACCAT 58.048 30.769 0.00 0.00 0.00 3.55
1455 6096 7.341445 ACTTGCATCAACTAAAACTAAACCA 57.659 32.000 0.00 0.00 0.00 3.67
1535 6176 1.072489 TCAGGGCATCACGGTTGTAAA 59.928 47.619 0.00 0.00 0.00 2.01
1552 6242 9.676195 TGTTAAAACATACAAACATGTGATCAG 57.324 29.630 0.00 0.00 39.10 2.90
1585 6330 4.732784 ACTGCCGTTAATGTGCAATTAAG 58.267 39.130 11.76 5.60 34.06 1.85
1597 6342 2.920524 TCCAAGACAAACTGCCGTTAA 58.079 42.857 0.00 0.00 31.86 2.01
1598 6343 2.614983 GTTCCAAGACAAACTGCCGTTA 59.385 45.455 0.00 0.00 31.86 3.18
1599 6344 1.404035 GTTCCAAGACAAACTGCCGTT 59.596 47.619 0.00 0.00 34.03 4.44
1600 6345 1.021968 GTTCCAAGACAAACTGCCGT 58.978 50.000 0.00 0.00 0.00 5.68
1601 6346 0.041312 CGTTCCAAGACAAACTGCCG 60.041 55.000 0.00 0.00 0.00 5.69
1602 6347 0.310854 CCGTTCCAAGACAAACTGCC 59.689 55.000 0.00 0.00 0.00 4.85
1603 6348 1.305201 TCCGTTCCAAGACAAACTGC 58.695 50.000 0.00 0.00 0.00 4.40
1604 6349 3.187227 CAGATCCGTTCCAAGACAAACTG 59.813 47.826 0.00 0.00 0.00 3.16
1605 6350 3.071023 TCAGATCCGTTCCAAGACAAACT 59.929 43.478 0.00 0.00 0.00 2.66
1606 6351 3.186613 GTCAGATCCGTTCCAAGACAAAC 59.813 47.826 0.00 0.00 0.00 2.93
1607 6352 3.071023 AGTCAGATCCGTTCCAAGACAAA 59.929 43.478 0.00 0.00 0.00 2.83
1608 6353 2.632996 AGTCAGATCCGTTCCAAGACAA 59.367 45.455 0.00 0.00 0.00 3.18
1609 6354 2.248248 AGTCAGATCCGTTCCAAGACA 58.752 47.619 0.00 0.00 0.00 3.41
1610 6355 3.320673 AAGTCAGATCCGTTCCAAGAC 57.679 47.619 0.00 0.00 0.00 3.01
1611 6356 4.282449 TGTAAAGTCAGATCCGTTCCAAGA 59.718 41.667 0.00 0.00 0.00 3.02
1612 6357 4.566004 TGTAAAGTCAGATCCGTTCCAAG 58.434 43.478 0.00 0.00 0.00 3.61
1613 6358 4.610605 TGTAAAGTCAGATCCGTTCCAA 57.389 40.909 0.00 0.00 0.00 3.53
1614 6359 4.039973 AGTTGTAAAGTCAGATCCGTTCCA 59.960 41.667 0.00 0.00 0.00 3.53
1615 6360 4.389077 CAGTTGTAAAGTCAGATCCGTTCC 59.611 45.833 0.00 0.00 0.00 3.62
1616 6361 4.989168 ACAGTTGTAAAGTCAGATCCGTTC 59.011 41.667 0.00 0.00 0.00 3.95
1617 6362 4.750098 CACAGTTGTAAAGTCAGATCCGTT 59.250 41.667 0.00 0.00 0.00 4.44
1618 6363 4.038763 TCACAGTTGTAAAGTCAGATCCGT 59.961 41.667 0.00 0.00 0.00 4.69
1619 6364 4.556233 TCACAGTTGTAAAGTCAGATCCG 58.444 43.478 0.00 0.00 0.00 4.18
1620 6365 5.163814 GCATCACAGTTGTAAAGTCAGATCC 60.164 44.000 0.00 0.00 0.00 3.36
1621 6366 5.163814 GGCATCACAGTTGTAAAGTCAGATC 60.164 44.000 0.00 0.00 0.00 2.75
1622 6367 4.697352 GGCATCACAGTTGTAAAGTCAGAT 59.303 41.667 0.00 0.00 0.00 2.90
1623 6368 4.065088 GGCATCACAGTTGTAAAGTCAGA 58.935 43.478 0.00 0.00 0.00 3.27
1624 6369 3.189287 GGGCATCACAGTTGTAAAGTCAG 59.811 47.826 0.00 0.00 0.00 3.51
1625 6370 3.146066 GGGCATCACAGTTGTAAAGTCA 58.854 45.455 0.00 0.00 0.00 3.41
1626 6371 3.189287 CAGGGCATCACAGTTGTAAAGTC 59.811 47.826 0.00 0.00 0.00 3.01
1627 6372 3.149196 CAGGGCATCACAGTTGTAAAGT 58.851 45.455 0.00 0.00 0.00 2.66
1628 6373 3.411446 TCAGGGCATCACAGTTGTAAAG 58.589 45.455 0.00 0.00 0.00 1.85
1629 6374 3.500448 TCAGGGCATCACAGTTGTAAA 57.500 42.857 0.00 0.00 0.00 2.01
1630 6375 3.008923 TGATCAGGGCATCACAGTTGTAA 59.991 43.478 0.00 0.00 0.00 2.41
1631 6376 2.571202 TGATCAGGGCATCACAGTTGTA 59.429 45.455 0.00 0.00 0.00 2.41
1632 6377 1.352017 TGATCAGGGCATCACAGTTGT 59.648 47.619 0.00 0.00 0.00 3.32
1633 6378 2.118313 TGATCAGGGCATCACAGTTG 57.882 50.000 0.00 0.00 0.00 3.16
1639 6384 2.756207 CAAACATGTGATCAGGGCATCA 59.244 45.455 0.00 0.00 0.00 3.07
1640 6385 2.756760 ACAAACATGTGATCAGGGCATC 59.243 45.455 0.00 0.00 0.00 3.91
1641 6386 2.811410 ACAAACATGTGATCAGGGCAT 58.189 42.857 0.00 0.00 0.00 4.40
1642 6387 2.291209 ACAAACATGTGATCAGGGCA 57.709 45.000 0.00 0.00 0.00 5.36
1643 6388 3.696051 ACATACAAACATGTGATCAGGGC 59.304 43.478 0.00 0.00 37.74 5.19
1644 6389 5.902613 AACATACAAACATGTGATCAGGG 57.097 39.130 0.00 0.00 39.10 4.45
1645 6390 9.128107 GTTAAAACATACAAACATGTGATCAGG 57.872 33.333 0.00 0.00 39.10 3.86
1646 6391 9.676195 TGTTAAAACATACAAACATGTGATCAG 57.324 29.630 0.00 0.00 39.10 2.90
1647 6392 9.676195 CTGTTAAAACATACAAACATGTGATCA 57.324 29.630 0.00 0.00 39.10 2.92
1648 6393 8.638565 GCTGTTAAAACATACAAACATGTGATC 58.361 33.333 0.00 0.00 39.10 2.92
1649 6394 8.359642 AGCTGTTAAAACATACAAACATGTGAT 58.640 29.630 0.00 0.00 39.10 3.06
1650 6395 7.711846 AGCTGTTAAAACATACAAACATGTGA 58.288 30.769 0.00 0.00 39.10 3.58
1651 6396 7.928908 AGCTGTTAAAACATACAAACATGTG 57.071 32.000 0.00 0.00 39.10 3.21
1652 6397 8.940768 AAAGCTGTTAAAACATACAAACATGT 57.059 26.923 0.00 0.00 40.90 3.21
1653 6398 8.487176 GGAAAGCTGTTAAAACATACAAACATG 58.513 33.333 0.00 0.00 38.41 3.21
1654 6399 8.421002 AGGAAAGCTGTTAAAACATACAAACAT 58.579 29.630 0.00 0.00 38.41 2.71
1655 6400 7.777095 AGGAAAGCTGTTAAAACATACAAACA 58.223 30.769 0.00 0.00 38.41 2.83
1656 6401 8.642908 AAGGAAAGCTGTTAAAACATACAAAC 57.357 30.769 0.00 0.00 38.41 2.93
1663 6408 9.738832 GTACAATTAAGGAAAGCTGTTAAAACA 57.261 29.630 0.00 0.00 37.37 2.83
1664 6409 9.738832 TGTACAATTAAGGAAAGCTGTTAAAAC 57.261 29.630 0.00 0.00 0.00 2.43
1665 6410 9.738832 GTGTACAATTAAGGAAAGCTGTTAAAA 57.261 29.630 0.00 0.00 0.00 1.52
1666 6411 8.071368 CGTGTACAATTAAGGAAAGCTGTTAAA 58.929 33.333 0.00 0.00 0.00 1.52
1667 6412 7.227116 ACGTGTACAATTAAGGAAAGCTGTTAA 59.773 33.333 0.00 0.00 0.00 2.01
1668 6413 6.707161 ACGTGTACAATTAAGGAAAGCTGTTA 59.293 34.615 0.00 0.00 0.00 2.41
1669 6414 5.529800 ACGTGTACAATTAAGGAAAGCTGTT 59.470 36.000 0.00 0.00 0.00 3.16
1670 6415 5.049680 CACGTGTACAATTAAGGAAAGCTGT 60.050 40.000 7.58 0.00 0.00 4.40
1671 6416 5.049680 ACACGTGTACAATTAAGGAAAGCTG 60.050 40.000 21.98 0.00 0.00 4.24
1672 6417 5.061179 ACACGTGTACAATTAAGGAAAGCT 58.939 37.500 21.98 0.00 0.00 3.74
1673 6418 5.352643 ACACGTGTACAATTAAGGAAAGC 57.647 39.130 21.98 0.00 0.00 3.51
1674 6419 7.586300 CAGAAACACGTGTACAATTAAGGAAAG 59.414 37.037 23.69 0.00 0.00 2.62
1675 6420 7.280428 TCAGAAACACGTGTACAATTAAGGAAA 59.720 33.333 23.69 0.00 0.00 3.13
1676 6421 6.762187 TCAGAAACACGTGTACAATTAAGGAA 59.238 34.615 23.69 0.00 0.00 3.36
1677 6422 6.282167 TCAGAAACACGTGTACAATTAAGGA 58.718 36.000 23.69 7.85 0.00 3.36
1678 6423 6.422701 TCTCAGAAACACGTGTACAATTAAGG 59.577 38.462 23.69 7.26 0.00 2.69
1679 6424 7.402811 TCTCAGAAACACGTGTACAATTAAG 57.597 36.000 23.69 13.30 0.00 1.85
1680 6425 7.493320 ACTTCTCAGAAACACGTGTACAATTAA 59.507 33.333 23.69 10.31 0.00 1.40
1681 6426 6.982141 ACTTCTCAGAAACACGTGTACAATTA 59.018 34.615 23.69 5.54 0.00 1.40
1682 6427 5.815740 ACTTCTCAGAAACACGTGTACAATT 59.184 36.000 23.69 12.68 0.00 2.32
1683 6428 5.357257 ACTTCTCAGAAACACGTGTACAAT 58.643 37.500 23.69 8.79 0.00 2.71
1684 6429 4.751060 ACTTCTCAGAAACACGTGTACAA 58.249 39.130 23.69 10.40 0.00 2.41
1685 6430 4.380841 ACTTCTCAGAAACACGTGTACA 57.619 40.909 23.69 3.26 0.00 2.90
1686 6431 7.404139 AATTACTTCTCAGAAACACGTGTAC 57.596 36.000 23.69 18.51 0.00 2.90
1687 6432 7.042321 CCAAATTACTTCTCAGAAACACGTGTA 60.042 37.037 23.69 4.57 0.00 2.90
1688 6433 6.238374 CCAAATTACTTCTCAGAAACACGTGT 60.238 38.462 17.22 17.22 0.00 4.49
1689 6434 6.018262 TCCAAATTACTTCTCAGAAACACGTG 60.018 38.462 15.48 15.48 0.00 4.49
1690 6435 6.018180 GTCCAAATTACTTCTCAGAAACACGT 60.018 38.462 0.00 0.00 0.00 4.49
1774 6523 9.911788 AATCACATAGAAACAGGATCTAAATGT 57.088 29.630 0.00 0.00 33.37 2.71
1822 6606 2.132762 AGCAACTTACGGCGTATATGC 58.867 47.619 29.06 29.06 34.54 3.14
1845 6629 6.276832 TGCCTTCACGAGTTAGTATAAACT 57.723 37.500 0.00 0.00 42.36 2.66
1962 6781 6.015180 TGGAGAAAAGACTGCAAAGCAATAAT 60.015 34.615 0.00 0.00 38.41 1.28
1963 6782 5.301551 TGGAGAAAAGACTGCAAAGCAATAA 59.698 36.000 0.00 0.00 38.41 1.40
1964 6783 4.826733 TGGAGAAAAGACTGCAAAGCAATA 59.173 37.500 0.00 0.00 38.41 1.90
2258 7102 7.548427 TCAGTCATTTCAACAAATTTCAGCAAA 59.452 29.630 0.00 0.00 28.97 3.68
2298 7147 7.394359 TGGAAAAGGAGAGAAATTGATAAGGTG 59.606 37.037 0.00 0.00 0.00 4.00
2316 7165 6.434028 TCCTACATCACAAGAAATGGAAAAGG 59.566 38.462 0.00 0.00 0.00 3.11
2591 7440 1.001520 TCCACAGGACATAACACCACG 59.998 52.381 0.00 0.00 0.00 4.94
2595 7444 3.074412 CAGGTTCCACAGGACATAACAC 58.926 50.000 0.00 0.00 0.00 3.32
2626 7475 3.055094 TGGAAAAGACTCCAGCATAGGAC 60.055 47.826 0.00 0.00 40.71 3.85
2627 7476 3.055094 GTGGAAAAGACTCCAGCATAGGA 60.055 47.826 0.00 0.00 46.29 2.94
2635 7484 1.124780 TGACGGTGGAAAAGACTCCA 58.875 50.000 0.00 0.00 43.45 3.86
2637 7486 4.830826 AATTTGACGGTGGAAAAGACTC 57.169 40.909 0.00 0.00 0.00 3.36
2639 7488 4.026062 GCAAAATTTGACGGTGGAAAAGAC 60.026 41.667 10.26 0.00 0.00 3.01
2640 7489 4.116238 GCAAAATTTGACGGTGGAAAAGA 58.884 39.130 10.26 0.00 0.00 2.52
2641 7490 4.119136 AGCAAAATTTGACGGTGGAAAAG 58.881 39.130 10.26 0.00 0.00 2.27
2642 7491 4.130286 AGCAAAATTTGACGGTGGAAAA 57.870 36.364 10.26 0.00 0.00 2.29
2646 7495 2.556622 AGGTAGCAAAATTTGACGGTGG 59.443 45.455 10.26 0.00 0.00 4.61
2693 7552 5.335127 GCACATAGCAAATAGTTCAACAGG 58.665 41.667 0.00 0.00 44.79 4.00
2734 7593 9.166173 CACATCAAGGACTACTTAAATCATTCA 57.834 33.333 0.00 0.00 37.29 2.57
2796 7655 7.333672 ACACCGATAACTTAAGAAAAGGACATC 59.666 37.037 10.09 0.00 0.00 3.06
2810 7669 7.065803 GCCATAATATATGCACACCGATAACTT 59.934 37.037 0.00 0.00 0.00 2.66
2889 7758 3.517296 TGGGTAACAAAAGGCTCATGA 57.483 42.857 6.50 0.00 39.74 3.07
2901 7770 3.722908 TTCCCGATTTGATGGGTAACA 57.277 42.857 0.00 0.00 46.13 2.41
2903 7772 6.008696 AGTATTTCCCGATTTGATGGGTAA 57.991 37.500 0.00 0.00 46.13 2.85
2909 7778 6.598064 ACGAAAGAAGTATTTCCCGATTTGAT 59.402 34.615 10.40 0.00 36.08 2.57
2911 7780 6.178239 ACGAAAGAAGTATTTCCCGATTTG 57.822 37.500 10.40 2.44 36.08 2.32
2922 7791 6.647067 CACTCTTTGAAGGACGAAAGAAGTAT 59.353 38.462 0.00 0.00 37.66 2.12
2923 7792 5.983720 CACTCTTTGAAGGACGAAAGAAGTA 59.016 40.000 0.00 0.00 37.66 2.24
2924 7793 4.811557 CACTCTTTGAAGGACGAAAGAAGT 59.188 41.667 0.00 0.00 37.66 3.01
2925 7794 4.811557 ACACTCTTTGAAGGACGAAAGAAG 59.188 41.667 0.00 0.00 37.66 2.85
2926 7795 4.766375 ACACTCTTTGAAGGACGAAAGAA 58.234 39.130 0.00 0.00 37.66 2.52
2927 7796 4.402056 ACACTCTTTGAAGGACGAAAGA 57.598 40.909 0.00 0.00 36.15 2.52
2928 7797 6.787085 AATACACTCTTTGAAGGACGAAAG 57.213 37.500 0.00 0.00 0.00 2.62
2929 7798 7.281324 TGAAAATACACTCTTTGAAGGACGAAA 59.719 33.333 0.00 0.00 0.00 3.46
2930 7799 6.764085 TGAAAATACACTCTTTGAAGGACGAA 59.236 34.615 0.00 0.00 0.00 3.85
2931 7800 6.285224 TGAAAATACACTCTTTGAAGGACGA 58.715 36.000 0.00 0.00 0.00 4.20
2932 7801 6.539649 TGAAAATACACTCTTTGAAGGACG 57.460 37.500 0.00 0.00 0.00 4.79
2933 7802 7.931275 AGTTGAAAATACACTCTTTGAAGGAC 58.069 34.615 0.00 0.00 0.00 3.85
2934 7803 8.519799 AAGTTGAAAATACACTCTTTGAAGGA 57.480 30.769 0.00 0.00 0.00 3.36
2935 7804 9.237846 GAAAGTTGAAAATACACTCTTTGAAGG 57.762 33.333 0.00 0.00 30.65 3.46
2938 7807 9.787532 CAAGAAAGTTGAAAATACACTCTTTGA 57.212 29.630 0.00 0.00 30.65 2.69
2939 7808 9.787532 TCAAGAAAGTTGAAAATACACTCTTTG 57.212 29.630 0.00 0.00 30.65 2.77
2941 7810 9.396022 TCTCAAGAAAGTTGAAAATACACTCTT 57.604 29.630 0.00 0.00 0.00 2.85
2942 7811 8.964476 TCTCAAGAAAGTTGAAAATACACTCT 57.036 30.769 0.00 0.00 0.00 3.24
2943 7812 9.657121 CTTCTCAAGAAAGTTGAAAATACACTC 57.343 33.333 0.00 0.00 33.07 3.51
2944 7813 9.178758 ACTTCTCAAGAAAGTTGAAAATACACT 57.821 29.630 0.00 0.00 33.07 3.55
2945 7814 9.439537 GACTTCTCAAGAAAGTTGAAAATACAC 57.560 33.333 0.00 0.00 33.07 2.90
2946 7815 9.173021 TGACTTCTCAAGAAAGTTGAAAATACA 57.827 29.630 0.00 0.00 33.07 2.29
2950 7819 9.927668 AAATTGACTTCTCAAGAAAGTTGAAAA 57.072 25.926 0.00 0.00 39.83 2.29
2951 7820 9.927668 AAAATTGACTTCTCAAGAAAGTTGAAA 57.072 25.926 0.00 0.00 39.83 2.69
2952 7821 9.927668 AAAAATTGACTTCTCAAGAAAGTTGAA 57.072 25.926 0.00 0.00 39.83 2.69
3012 7881 9.329913 GCTACTAATTTGACGGCATAAATATTG 57.670 33.333 0.00 0.00 0.00 1.90
3013 7882 8.227791 CGCTACTAATTTGACGGCATAAATATT 58.772 33.333 0.00 0.00 0.00 1.28
3014 7883 7.386848 ACGCTACTAATTTGACGGCATAAATAT 59.613 33.333 0.00 0.00 0.00 1.28
3015 7884 6.702723 ACGCTACTAATTTGACGGCATAAATA 59.297 34.615 0.00 0.00 0.00 1.40
3016 7885 5.526111 ACGCTACTAATTTGACGGCATAAAT 59.474 36.000 0.00 0.00 0.00 1.40
3017 7886 4.871557 ACGCTACTAATTTGACGGCATAAA 59.128 37.500 0.00 0.00 0.00 1.40
3018 7887 4.435425 ACGCTACTAATTTGACGGCATAA 58.565 39.130 0.00 0.00 0.00 1.90
3019 7888 4.049546 ACGCTACTAATTTGACGGCATA 57.950 40.909 0.00 0.00 0.00 3.14
3020 7889 2.901249 ACGCTACTAATTTGACGGCAT 58.099 42.857 0.00 0.00 0.00 4.40
3021 7890 2.373540 ACGCTACTAATTTGACGGCA 57.626 45.000 0.00 0.00 0.00 5.69
3022 7891 3.413558 CAAACGCTACTAATTTGACGGC 58.586 45.455 0.00 0.00 35.73 5.68
3023 7892 3.434299 ACCAAACGCTACTAATTTGACGG 59.566 43.478 0.00 0.00 35.73 4.79
3024 7893 4.657075 ACCAAACGCTACTAATTTGACG 57.343 40.909 0.00 0.00 35.73 4.35
3025 7894 7.745015 TCATTACCAAACGCTACTAATTTGAC 58.255 34.615 0.00 0.00 35.73 3.18
3026 7895 7.908827 TCATTACCAAACGCTACTAATTTGA 57.091 32.000 0.00 0.00 35.73 2.69
3134 8003 9.485206 GTGTATCTCCAACTTTGTTAAAGAGTA 57.515 33.333 8.18 0.00 41.02 2.59
3135 8004 8.211629 AGTGTATCTCCAACTTTGTTAAAGAGT 58.788 33.333 8.18 0.00 41.02 3.24
3136 8005 8.608844 AGTGTATCTCCAACTTTGTTAAAGAG 57.391 34.615 8.18 0.00 41.02 2.85
3137 8006 8.974060 AAGTGTATCTCCAACTTTGTTAAAGA 57.026 30.769 8.18 0.00 41.02 2.52
3162 8031 4.553330 AGATGCTCTCCGTCCTTAAAAA 57.447 40.909 0.00 0.00 0.00 1.94
3163 8032 5.670792 TTAGATGCTCTCCGTCCTTAAAA 57.329 39.130 0.00 0.00 0.00 1.52
3164 8033 5.598830 AGATTAGATGCTCTCCGTCCTTAAA 59.401 40.000 0.00 0.00 0.00 1.52
3165 8034 5.141182 AGATTAGATGCTCTCCGTCCTTAA 58.859 41.667 0.00 0.00 0.00 1.85
3166 8035 4.730966 AGATTAGATGCTCTCCGTCCTTA 58.269 43.478 0.00 0.00 0.00 2.69
3167 8036 3.571590 AGATTAGATGCTCTCCGTCCTT 58.428 45.455 0.00 0.00 0.00 3.36
3168 8037 3.153919 GAGATTAGATGCTCTCCGTCCT 58.846 50.000 0.00 0.00 33.30 3.85
3169 8038 3.153919 AGAGATTAGATGCTCTCCGTCC 58.846 50.000 0.00 0.00 36.84 4.79
3175 8044 4.106179 TCAGGAGGAGAGATTAGATGCTCT 59.894 45.833 0.00 0.00 43.78 4.09
3176 8045 4.406456 TCAGGAGGAGAGATTAGATGCTC 58.594 47.826 0.00 0.00 0.00 4.26
3177 8046 4.467861 TCAGGAGGAGAGATTAGATGCT 57.532 45.455 0.00 0.00 0.00 3.79
3178 8047 5.743636 AATCAGGAGGAGAGATTAGATGC 57.256 43.478 0.00 0.00 30.70 3.91
3184 8053 9.406113 CTTCATTTAAAATCAGGAGGAGAGATT 57.594 33.333 0.00 0.00 33.68 2.40
3185 8054 7.997803 CCTTCATTTAAAATCAGGAGGAGAGAT 59.002 37.037 0.00 0.00 0.00 2.75
3186 8055 7.341805 CCTTCATTTAAAATCAGGAGGAGAGA 58.658 38.462 0.00 0.00 0.00 3.10
3187 8056 6.545298 CCCTTCATTTAAAATCAGGAGGAGAG 59.455 42.308 10.21 0.00 0.00 3.20
3188 8057 6.011628 ACCCTTCATTTAAAATCAGGAGGAGA 60.012 38.462 10.21 0.00 0.00 3.71
3189 8058 6.096001 CACCCTTCATTTAAAATCAGGAGGAG 59.904 42.308 10.21 4.28 0.00 3.69
3190 8059 5.951747 CACCCTTCATTTAAAATCAGGAGGA 59.048 40.000 10.21 0.00 0.00 3.71
3191 8060 5.127682 CCACCCTTCATTTAAAATCAGGAGG 59.872 44.000 10.21 6.22 0.00 4.30
3192 8061 5.716703 ACCACCCTTCATTTAAAATCAGGAG 59.283 40.000 10.21 4.99 0.00 3.69
3193 8062 5.650283 ACCACCCTTCATTTAAAATCAGGA 58.350 37.500 10.21 0.00 0.00 3.86
3194 8063 6.404293 CGTACCACCCTTCATTTAAAATCAGG 60.404 42.308 0.00 0.00 0.00 3.86
3195 8064 6.150474 ACGTACCACCCTTCATTTAAAATCAG 59.850 38.462 0.00 0.00 0.00 2.90
3196 8065 6.005198 ACGTACCACCCTTCATTTAAAATCA 58.995 36.000 0.00 0.00 0.00 2.57
3197 8066 6.505044 ACGTACCACCCTTCATTTAAAATC 57.495 37.500 0.00 0.00 0.00 2.17
3198 8067 7.830201 TGATACGTACCACCCTTCATTTAAAAT 59.170 33.333 0.00 0.00 0.00 1.82
3199 8068 7.166851 TGATACGTACCACCCTTCATTTAAAA 58.833 34.615 0.00 0.00 0.00 1.52
3200 8069 6.709281 TGATACGTACCACCCTTCATTTAAA 58.291 36.000 0.00 0.00 0.00 1.52
3201 8070 6.297080 TGATACGTACCACCCTTCATTTAA 57.703 37.500 0.00 0.00 0.00 1.52
3202 8071 5.936187 TGATACGTACCACCCTTCATTTA 57.064 39.130 0.00 0.00 0.00 1.40
3203 8072 4.829872 TGATACGTACCACCCTTCATTT 57.170 40.909 0.00 0.00 0.00 2.32
3204 8073 5.104693 TGAATGATACGTACCACCCTTCATT 60.105 40.000 14.85 14.85 35.63 2.57
3205 8074 4.407621 TGAATGATACGTACCACCCTTCAT 59.592 41.667 0.00 0.00 0.00 2.57
3206 8075 3.770388 TGAATGATACGTACCACCCTTCA 59.230 43.478 0.00 0.00 0.00 3.02
3207 8076 4.395959 TGAATGATACGTACCACCCTTC 57.604 45.455 0.00 0.00 0.00 3.46
3208 8077 4.444306 CCATGAATGATACGTACCACCCTT 60.444 45.833 0.00 0.00 0.00 3.95
3209 8078 3.071023 CCATGAATGATACGTACCACCCT 59.929 47.826 0.00 0.00 0.00 4.34
3210 8079 3.399330 CCATGAATGATACGTACCACCC 58.601 50.000 0.00 0.00 0.00 4.61
3211 8080 3.181458 ACCCATGAATGATACGTACCACC 60.181 47.826 0.00 0.00 0.00 4.61
3212 8081 4.056050 GACCCATGAATGATACGTACCAC 58.944 47.826 0.00 0.00 0.00 4.16
3213 8082 3.707102 TGACCCATGAATGATACGTACCA 59.293 43.478 0.00 0.00 0.00 3.25
3214 8083 4.038763 TCTGACCCATGAATGATACGTACC 59.961 45.833 0.00 0.00 0.00 3.34
3215 8084 4.982916 GTCTGACCCATGAATGATACGTAC 59.017 45.833 0.00 0.00 0.00 3.67
3216 8085 4.038763 GGTCTGACCCATGAATGATACGTA 59.961 45.833 16.14 0.00 30.04 3.57
3217 8086 3.181465 GGTCTGACCCATGAATGATACGT 60.181 47.826 16.14 0.00 30.04 3.57
3218 8087 3.070159 AGGTCTGACCCATGAATGATACG 59.930 47.826 22.81 0.00 39.75 3.06
3219 8088 4.101585 TCAGGTCTGACCCATGAATGATAC 59.898 45.833 22.81 0.00 39.75 2.24
3220 8089 4.297768 TCAGGTCTGACCCATGAATGATA 58.702 43.478 22.81 0.00 39.75 2.15
3221 8090 3.117745 TCAGGTCTGACCCATGAATGAT 58.882 45.455 22.81 0.00 39.75 2.45
3222 8091 2.550175 TCAGGTCTGACCCATGAATGA 58.450 47.619 22.81 15.43 39.75 2.57
3223 8092 3.136077 AGATCAGGTCTGACCCATGAATG 59.864 47.826 22.81 13.39 43.11 2.67
3224 8093 3.391774 AGATCAGGTCTGACCCATGAAT 58.608 45.455 22.81 11.19 43.11 2.57
3225 8094 2.837947 AGATCAGGTCTGACCCATGAA 58.162 47.619 22.81 5.08 43.11 2.57
3226 8095 2.557555 AGATCAGGTCTGACCCATGA 57.442 50.000 22.81 20.04 43.11 3.07
3258 8127 8.824404 GCCAGTGGCTATTCCTCTATTGGAAA 62.824 46.154 27.48 0.00 45.90 3.13
3259 8128 7.442655 GCCAGTGGCTATTCCTCTATTGGAA 62.443 48.000 27.48 0.00 46.36 3.53
3260 8129 3.648067 CCAGTGGCTATTCCTCTATTGGA 59.352 47.826 0.00 0.00 36.59 3.53
3261 8130 3.808618 GCCAGTGGCTATTCCTCTATTGG 60.809 52.174 27.48 0.00 46.69 3.16
3262 8131 3.406764 GCCAGTGGCTATTCCTCTATTG 58.593 50.000 27.48 0.00 46.69 1.90
3263 8132 3.778954 GCCAGTGGCTATTCCTCTATT 57.221 47.619 27.48 0.00 46.69 1.73
3275 8144 3.323268 CTGAAAGACGTTGCCAGTGGC 62.323 57.143 28.01 28.01 43.77 5.01
3276 8145 0.588252 CTGAAAGACGTTGCCAGTGG 59.412 55.000 4.20 4.20 34.07 4.00
3277 8146 1.581934 TCTGAAAGACGTTGCCAGTG 58.418 50.000 0.00 0.00 38.67 3.66
3288 8157 4.496507 CGCTCATCGTCTATGTCTGAAAGA 60.497 45.833 0.00 0.00 35.73 2.52
3289 8158 3.728221 CGCTCATCGTCTATGTCTGAAAG 59.272 47.826 0.00 0.00 36.89 2.62
3290 8159 3.489229 CCGCTCATCGTCTATGTCTGAAA 60.489 47.826 0.00 0.00 36.89 2.69
3291 8160 2.033424 CCGCTCATCGTCTATGTCTGAA 59.967 50.000 0.00 0.00 36.89 3.02
3292 8161 1.604278 CCGCTCATCGTCTATGTCTGA 59.396 52.381 0.00 0.00 36.89 3.27
3293 8162 1.335415 CCCGCTCATCGTCTATGTCTG 60.335 57.143 0.00 0.00 36.89 3.51
3294 8163 0.955178 CCCGCTCATCGTCTATGTCT 59.045 55.000 0.00 0.00 36.89 3.41
3295 8164 0.952280 TCCCGCTCATCGTCTATGTC 59.048 55.000 0.00 0.00 36.89 3.06
3296 8165 1.338337 CTTCCCGCTCATCGTCTATGT 59.662 52.381 0.00 0.00 36.89 2.29
3297 8166 1.336332 CCTTCCCGCTCATCGTCTATG 60.336 57.143 0.00 0.00 36.88 2.23
3298 8167 0.962489 CCTTCCCGCTCATCGTCTAT 59.038 55.000 0.00 0.00 36.19 1.98
3299 8168 0.395311 ACCTTCCCGCTCATCGTCTA 60.395 55.000 0.00 0.00 36.19 2.59
3300 8169 1.682684 ACCTTCCCGCTCATCGTCT 60.683 57.895 0.00 0.00 36.19 4.18
3301 8170 1.519455 CACCTTCCCGCTCATCGTC 60.519 63.158 0.00 0.00 36.19 4.20
3302 8171 2.579201 CACCTTCCCGCTCATCGT 59.421 61.111 0.00 0.00 36.19 3.73
3303 8172 2.202932 CCACCTTCCCGCTCATCG 60.203 66.667 0.00 0.00 38.08 3.84
3304 8173 1.144936 CTCCACCTTCCCGCTCATC 59.855 63.158 0.00 0.00 0.00 2.92
3305 8174 2.370445 CCTCCACCTTCCCGCTCAT 61.370 63.158 0.00 0.00 0.00 2.90
3306 8175 3.003173 CCTCCACCTTCCCGCTCA 61.003 66.667 0.00 0.00 0.00 4.26
3307 8176 4.475135 GCCTCCACCTTCCCGCTC 62.475 72.222 0.00 0.00 0.00 5.03
3310 8179 4.760047 CACGCCTCCACCTTCCCG 62.760 72.222 0.00 0.00 0.00 5.14
3311 8180 1.335132 TATCACGCCTCCACCTTCCC 61.335 60.000 0.00 0.00 0.00 3.97
3312 8181 0.179081 GTATCACGCCTCCACCTTCC 60.179 60.000 0.00 0.00 0.00 3.46
3313 8182 0.824759 AGTATCACGCCTCCACCTTC 59.175 55.000 0.00 0.00 0.00 3.46
3314 8183 0.824759 GAGTATCACGCCTCCACCTT 59.175 55.000 0.00 0.00 33.17 3.50
3315 8184 0.033011 AGAGTATCACGCCTCCACCT 60.033 55.000 0.00 0.00 37.82 4.00
3316 8185 0.824759 AAGAGTATCACGCCTCCACC 59.175 55.000 0.00 0.00 37.82 4.61
3317 8186 1.471676 CCAAGAGTATCACGCCTCCAC 60.472 57.143 0.00 0.00 37.82 4.02
3318 8187 0.824109 CCAAGAGTATCACGCCTCCA 59.176 55.000 0.00 0.00 37.82 3.86
3319 8188 0.105039 CCCAAGAGTATCACGCCTCC 59.895 60.000 0.00 0.00 37.82 4.30
3320 8189 0.105039 CCCCAAGAGTATCACGCCTC 59.895 60.000 0.00 0.00 37.82 4.70
3321 8190 0.617820 ACCCCAAGAGTATCACGCCT 60.618 55.000 0.00 0.00 37.82 5.52
3322 8191 0.252197 AACCCCAAGAGTATCACGCC 59.748 55.000 0.00 0.00 37.82 5.68
3323 8192 2.109425 AAACCCCAAGAGTATCACGC 57.891 50.000 0.00 0.00 37.82 5.34
3324 8193 3.188460 CACAAAACCCCAAGAGTATCACG 59.812 47.826 0.00 0.00 37.82 4.35
3325 8194 4.394729 TCACAAAACCCCAAGAGTATCAC 58.605 43.478 0.00 0.00 37.82 3.06
3326 8195 4.715534 TCACAAAACCCCAAGAGTATCA 57.284 40.909 0.00 0.00 37.82 2.15
3327 8196 5.946377 AGAATCACAAAACCCCAAGAGTATC 59.054 40.000 0.00 0.00 0.00 2.24
3328 8197 5.892348 AGAATCACAAAACCCCAAGAGTAT 58.108 37.500 0.00 0.00 0.00 2.12
3329 8198 5.319043 AGAATCACAAAACCCCAAGAGTA 57.681 39.130 0.00 0.00 0.00 2.59
3330 8199 4.184649 AGAATCACAAAACCCCAAGAGT 57.815 40.909 0.00 0.00 0.00 3.24
3331 8200 4.342092 ACAAGAATCACAAAACCCCAAGAG 59.658 41.667 0.00 0.00 0.00 2.85
3332 8201 4.285863 ACAAGAATCACAAAACCCCAAGA 58.714 39.130 0.00 0.00 0.00 3.02
3333 8202 4.620982 GACAAGAATCACAAAACCCCAAG 58.379 43.478 0.00 0.00 0.00 3.61
3334 8203 3.067461 CGACAAGAATCACAAAACCCCAA 59.933 43.478 0.00 0.00 0.00 4.12
3335 8204 2.621055 CGACAAGAATCACAAAACCCCA 59.379 45.455 0.00 0.00 0.00 4.96
3336 8205 2.607038 GCGACAAGAATCACAAAACCCC 60.607 50.000 0.00 0.00 0.00 4.95
3337 8206 2.293399 AGCGACAAGAATCACAAAACCC 59.707 45.455 0.00 0.00 0.00 4.11
3338 8207 3.626028 AGCGACAAGAATCACAAAACC 57.374 42.857 0.00 0.00 0.00 3.27
3339 8208 4.848757 AGAAGCGACAAGAATCACAAAAC 58.151 39.130 0.00 0.00 0.00 2.43
3340 8209 4.574421 TGAGAAGCGACAAGAATCACAAAA 59.426 37.500 0.00 0.00 0.00 2.44
3341 8210 4.024893 GTGAGAAGCGACAAGAATCACAAA 60.025 41.667 0.00 0.00 36.47 2.83
3342 8211 3.494626 GTGAGAAGCGACAAGAATCACAA 59.505 43.478 0.00 0.00 36.47 3.33
3343 8212 3.059884 GTGAGAAGCGACAAGAATCACA 58.940 45.455 0.00 0.00 36.47 3.58
3344 8213 3.059884 TGTGAGAAGCGACAAGAATCAC 58.940 45.455 0.00 0.00 36.87 3.06
3345 8214 3.385193 TGTGAGAAGCGACAAGAATCA 57.615 42.857 0.00 0.00 0.00 2.57
3346 8215 4.732285 TTTGTGAGAAGCGACAAGAATC 57.268 40.909 0.00 0.00 33.73 2.52
3347 8216 6.801539 TTATTTGTGAGAAGCGACAAGAAT 57.198 33.333 0.00 0.00 33.73 2.40
3348 8217 6.612247 TTTATTTGTGAGAAGCGACAAGAA 57.388 33.333 0.00 0.00 33.73 2.52
3349 8218 5.334105 GCTTTATTTGTGAGAAGCGACAAGA 60.334 40.000 0.00 0.00 35.68 3.02
3350 8219 4.848299 GCTTTATTTGTGAGAAGCGACAAG 59.152 41.667 0.00 0.00 35.68 3.16
3351 8220 4.515191 AGCTTTATTTGTGAGAAGCGACAA 59.485 37.500 0.00 0.00 46.73 3.18
3352 8221 4.065088 AGCTTTATTTGTGAGAAGCGACA 58.935 39.130 0.00 0.00 46.73 4.35
3353 8222 4.670227 AGCTTTATTTGTGAGAAGCGAC 57.330 40.909 0.00 0.00 46.73 5.19
3354 8223 6.985188 ATAAGCTTTATTTGTGAGAAGCGA 57.015 33.333 3.20 0.00 46.73 4.93
3355 8224 7.848051 CACTATAAGCTTTATTTGTGAGAAGCG 59.152 37.037 3.20 0.00 46.73 4.68
3356 8225 8.125448 CCACTATAAGCTTTATTTGTGAGAAGC 58.875 37.037 3.20 0.00 43.57 3.86
3357 8226 9.383519 TCCACTATAAGCTTTATTTGTGAGAAG 57.616 33.333 3.20 0.00 0.00 2.85
3358 8227 9.383519 CTCCACTATAAGCTTTATTTGTGAGAA 57.616 33.333 3.20 0.00 0.00 2.87
3359 8228 7.987458 CCTCCACTATAAGCTTTATTTGTGAGA 59.013 37.037 3.20 6.75 0.00 3.27
3360 8229 7.770897 ACCTCCACTATAAGCTTTATTTGTGAG 59.229 37.037 3.20 3.58 0.00 3.51
3361 8230 7.630082 ACCTCCACTATAAGCTTTATTTGTGA 58.370 34.615 3.20 0.00 0.00 3.58
3362 8231 7.254455 CGACCTCCACTATAAGCTTTATTTGTG 60.254 40.741 3.20 7.68 0.00 3.33
3363 8232 6.761714 CGACCTCCACTATAAGCTTTATTTGT 59.238 38.462 3.20 0.00 0.00 2.83
3364 8233 6.202954 CCGACCTCCACTATAAGCTTTATTTG 59.797 42.308 3.20 0.00 0.00 2.32
3365 8234 6.126854 ACCGACCTCCACTATAAGCTTTATTT 60.127 38.462 3.20 0.00 0.00 1.40
3366 8235 5.365895 ACCGACCTCCACTATAAGCTTTATT 59.634 40.000 3.20 0.00 0.00 1.40
3367 8236 4.900054 ACCGACCTCCACTATAAGCTTTAT 59.100 41.667 3.20 0.00 0.00 1.40
3368 8237 4.284178 ACCGACCTCCACTATAAGCTTTA 58.716 43.478 3.20 0.00 0.00 1.85
3369 8238 3.105283 ACCGACCTCCACTATAAGCTTT 58.895 45.455 3.20 0.00 0.00 3.51
3370 8239 2.748388 ACCGACCTCCACTATAAGCTT 58.252 47.619 3.48 3.48 0.00 3.74
3371 8240 2.456073 ACCGACCTCCACTATAAGCT 57.544 50.000 0.00 0.00 0.00 3.74
3372 8241 3.635836 ACTAACCGACCTCCACTATAAGC 59.364 47.826 0.00 0.00 0.00 3.09
3373 8242 4.037684 CCACTAACCGACCTCCACTATAAG 59.962 50.000 0.00 0.00 0.00 1.73
3374 8243 3.956199 CCACTAACCGACCTCCACTATAA 59.044 47.826 0.00 0.00 0.00 0.98
3375 8244 3.559069 CCACTAACCGACCTCCACTATA 58.441 50.000 0.00 0.00 0.00 1.31
3376 8245 2.385803 CCACTAACCGACCTCCACTAT 58.614 52.381 0.00 0.00 0.00 2.12
3377 8246 1.843368 CCACTAACCGACCTCCACTA 58.157 55.000 0.00 0.00 0.00 2.74
3378 8247 1.542187 GCCACTAACCGACCTCCACT 61.542 60.000 0.00 0.00 0.00 4.00
3379 8248 1.079336 GCCACTAACCGACCTCCAC 60.079 63.158 0.00 0.00 0.00 4.02
3380 8249 0.907704 ATGCCACTAACCGACCTCCA 60.908 55.000 0.00 0.00 0.00 3.86
3381 8250 1.117150 TATGCCACTAACCGACCTCC 58.883 55.000 0.00 0.00 0.00 4.30
3382 8251 2.973694 TTATGCCACTAACCGACCTC 57.026 50.000 0.00 0.00 0.00 3.85
3383 8252 3.706600 TTTTATGCCACTAACCGACCT 57.293 42.857 0.00 0.00 0.00 3.85
3384 8253 4.396790 TCATTTTTATGCCACTAACCGACC 59.603 41.667 0.00 0.00 0.00 4.79
3385 8254 5.554822 TCATTTTTATGCCACTAACCGAC 57.445 39.130 0.00 0.00 0.00 4.79
3386 8255 5.650266 ACATCATTTTTATGCCACTAACCGA 59.350 36.000 0.00 0.00 0.00 4.69
3387 8256 5.890334 ACATCATTTTTATGCCACTAACCG 58.110 37.500 0.00 0.00 0.00 4.44
3388 8257 9.816354 AATTACATCATTTTTATGCCACTAACC 57.184 29.630 0.00 0.00 0.00 2.85
3464 8333 9.765295 AGACCTTAAGGAGTATCAGTTTAGTTA 57.235 33.333 28.52 0.00 38.94 2.24
3465 8334 8.667592 AGACCTTAAGGAGTATCAGTTTAGTT 57.332 34.615 28.52 0.00 38.94 2.24
3466 8335 9.765295 TTAGACCTTAAGGAGTATCAGTTTAGT 57.235 33.333 28.52 0.00 38.94 2.24
3470 8339 9.710818 TGTATTAGACCTTAAGGAGTATCAGTT 57.289 33.333 28.52 1.43 38.94 3.16
3471 8340 9.884814 ATGTATTAGACCTTAAGGAGTATCAGT 57.115 33.333 28.52 2.24 38.94 3.41
3523 8392 8.854979 TGCATGTCATATATTGTTGCTTTAAC 57.145 30.769 0.00 0.00 39.80 2.01
3524 8393 9.299963 GTTGCATGTCATATATTGTTGCTTTAA 57.700 29.630 0.00 0.00 32.12 1.52
3525 8394 8.685427 AGTTGCATGTCATATATTGTTGCTTTA 58.315 29.630 0.00 0.00 32.12 1.85
3526 8395 7.549839 AGTTGCATGTCATATATTGTTGCTTT 58.450 30.769 0.00 0.00 32.12 3.51
3527 8396 7.104043 AGTTGCATGTCATATATTGTTGCTT 57.896 32.000 0.00 0.00 32.12 3.91
3528 8397 6.704289 AGTTGCATGTCATATATTGTTGCT 57.296 33.333 0.00 0.00 32.12 3.91
3529 8398 7.914871 TGTAAGTTGCATGTCATATATTGTTGC 59.085 33.333 0.00 0.00 0.00 4.17
3530 8399 9.225201 GTGTAAGTTGCATGTCATATATTGTTG 57.775 33.333 0.00 0.00 0.00 3.33
3531 8400 8.955388 TGTGTAAGTTGCATGTCATATATTGTT 58.045 29.630 0.00 0.00 0.00 2.83
3532 8401 8.504812 TGTGTAAGTTGCATGTCATATATTGT 57.495 30.769 0.00 0.00 0.00 2.71
3533 8402 9.786105 TTTGTGTAAGTTGCATGTCATATATTG 57.214 29.630 0.00 0.00 0.00 1.90
3535 8404 8.131100 GCTTTGTGTAAGTTGCATGTCATATAT 58.869 33.333 0.00 0.00 36.19 0.86
3536 8405 7.120432 TGCTTTGTGTAAGTTGCATGTCATATA 59.880 33.333 0.00 0.00 36.19 0.86
3537 8406 6.072008 TGCTTTGTGTAAGTTGCATGTCATAT 60.072 34.615 0.00 0.00 36.19 1.78
3538 8407 5.240403 TGCTTTGTGTAAGTTGCATGTCATA 59.760 36.000 0.00 0.00 36.19 2.15
3539 8408 4.037803 TGCTTTGTGTAAGTTGCATGTCAT 59.962 37.500 0.00 0.00 36.19 3.06
3540 8409 3.379688 TGCTTTGTGTAAGTTGCATGTCA 59.620 39.130 0.00 0.00 36.19 3.58
3541 8410 3.730715 GTGCTTTGTGTAAGTTGCATGTC 59.269 43.478 0.00 0.00 36.19 3.06
3542 8411 3.130164 TGTGCTTTGTGTAAGTTGCATGT 59.870 39.130 0.00 0.00 36.19 3.21
3543 8412 3.486841 GTGTGCTTTGTGTAAGTTGCATG 59.513 43.478 0.00 0.00 36.19 4.06
3544 8413 3.490761 GGTGTGCTTTGTGTAAGTTGCAT 60.491 43.478 0.00 0.00 36.19 3.96
3545 8414 2.159310 GGTGTGCTTTGTGTAAGTTGCA 60.159 45.455 0.00 0.00 36.19 4.08
3546 8415 2.459934 GGTGTGCTTTGTGTAAGTTGC 58.540 47.619 0.00 0.00 36.19 4.17
3547 8416 2.096819 ACGGTGTGCTTTGTGTAAGTTG 59.903 45.455 0.00 0.00 36.19 3.16
3548 8417 2.353579 GACGGTGTGCTTTGTGTAAGTT 59.646 45.455 0.00 0.00 36.19 2.66
3549 8418 1.937899 GACGGTGTGCTTTGTGTAAGT 59.062 47.619 0.00 0.00 36.19 2.24
3550 8419 1.937223 TGACGGTGTGCTTTGTGTAAG 59.063 47.619 0.00 0.00 36.90 2.34
3551 8420 2.025589 TGACGGTGTGCTTTGTGTAA 57.974 45.000 0.00 0.00 0.00 2.41
3552 8421 2.025589 TTGACGGTGTGCTTTGTGTA 57.974 45.000 0.00 0.00 0.00 2.90
3553 8422 1.169577 TTTGACGGTGTGCTTTGTGT 58.830 45.000 0.00 0.00 0.00 3.72
3554 8423 2.490328 ATTTGACGGTGTGCTTTGTG 57.510 45.000 0.00 0.00 0.00 3.33
3555 8424 2.540769 CGAATTTGACGGTGTGCTTTGT 60.541 45.455 0.00 0.00 0.00 2.83
3556 8425 2.043411 CGAATTTGACGGTGTGCTTTG 58.957 47.619 0.00 0.00 0.00 2.77
3557 8426 1.673920 ACGAATTTGACGGTGTGCTTT 59.326 42.857 0.00 0.00 34.93 3.51
3558 8427 1.305201 ACGAATTTGACGGTGTGCTT 58.695 45.000 0.00 0.00 34.93 3.91
3559 8428 2.157834 TACGAATTTGACGGTGTGCT 57.842 45.000 0.00 0.00 34.93 4.40
3560 8429 2.158841 ACATACGAATTTGACGGTGTGC 59.841 45.455 0.00 0.00 34.48 4.57
3561 8430 3.430556 TCACATACGAATTTGACGGTGTG 59.569 43.478 15.85 15.85 44.37 3.82
3562 8431 3.655486 TCACATACGAATTTGACGGTGT 58.345 40.909 0.00 0.00 35.44 4.16
3563 8432 4.655440 TTCACATACGAATTTGACGGTG 57.345 40.909 0.00 4.64 34.93 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.