Multiple sequence alignment - TraesCS2A01G226900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G226900 chr2A 100.000 2783 0 0 1 2783 236833618 236830836 0.000000e+00 5140.0
1 TraesCS2A01G226900 chr4A 90.993 1621 118 8 580 2184 724743414 724745022 0.000000e+00 2159.0
2 TraesCS2A01G226900 chr4A 92.361 1296 82 3 905 2184 479619648 479618354 0.000000e+00 1829.0
3 TraesCS2A01G226900 chr4A 95.294 510 20 2 2179 2687 513336311 513335805 0.000000e+00 806.0
4 TraesCS2A01G226900 chr4A 87.687 268 29 4 333 597 724743060 724743326 2.690000e-80 309.0
5 TraesCS2A01G226900 chr4A 91.262 206 18 0 336 541 479620370 479620165 5.870000e-72 281.0
6 TraesCS2A01G226900 chr1D 91.341 1432 86 16 774 2184 326162585 326163999 0.000000e+00 1923.0
7 TraesCS2A01G226900 chr1D 84.653 202 27 4 329 528 205499257 205499058 6.080000e-47 198.0
8 TraesCS2A01G226900 chr1D 84.831 178 21 5 336 510 211633705 211633879 1.020000e-39 174.0
9 TraesCS2A01G226900 chr1D 82.297 209 28 9 336 538 275603224 275603019 3.690000e-39 172.0
10 TraesCS2A01G226900 chr1D 96.907 97 2 1 2687 2783 205495223 205495128 7.980000e-36 161.0
11 TraesCS2A01G226900 chr7D 93.446 1297 69 2 904 2184 566460074 566458778 0.000000e+00 1910.0
12 TraesCS2A01G226900 chr7D 91.488 1351 92 9 855 2184 58799480 58798132 0.000000e+00 1836.0
13 TraesCS2A01G226900 chr7D 91.016 1280 100 6 920 2184 292263601 292264880 0.000000e+00 1712.0
14 TraesCS2A01G226900 chr7D 95.481 509 22 1 2180 2687 2892955 2893463 0.000000e+00 811.0
15 TraesCS2A01G226900 chr7D 95.098 510 24 1 2179 2687 20293511 20293002 0.000000e+00 802.0
16 TraesCS2A01G226900 chr7D 86.893 206 27 0 331 536 555211689 555211484 5.990000e-57 231.0
17 TraesCS2A01G226900 chr7D 82.564 195 32 2 355 549 179986264 179986456 1.330000e-38 171.0
18 TraesCS2A01G226900 chr2B 87.924 1623 164 13 581 2185 51109396 51111004 0.000000e+00 1882.0
19 TraesCS2A01G226900 chr2B 94.328 335 12 3 1 335 280476168 280475841 8.890000e-140 507.0
20 TraesCS2A01G226900 chr2B 86.567 268 30 5 335 597 51109030 51109296 9.750000e-75 291.0
21 TraesCS2A01G226900 chr4D 91.908 1347 86 12 854 2184 504006812 504005473 0.000000e+00 1862.0
22 TraesCS2A01G226900 chr4D 92.326 1290 83 2 910 2184 64353996 64352708 0.000000e+00 1820.0
23 TraesCS2A01G226900 chr4D 96.907 97 2 1 2687 2783 396427767 396427862 7.980000e-36 161.0
24 TraesCS2A01G226900 chr4D 96.907 97 2 1 2687 2783 468301011 468300916 7.980000e-36 161.0
25 TraesCS2A01G226900 chr3D 92.084 1339 77 16 854 2175 3345221 3343895 0.000000e+00 1858.0
26 TraesCS2A01G226900 chr3D 92.662 1281 73 3 920 2184 92863835 92862560 0.000000e+00 1825.0
27 TraesCS2A01G226900 chr3D 91.927 1313 84 12 893 2184 609640199 609638888 0.000000e+00 1818.0
28 TraesCS2A01G226900 chr3D 96.071 509 19 1 2180 2687 443417217 443417725 0.000000e+00 828.0
29 TraesCS2A01G226900 chr3D 83.404 235 33 5 334 564 514900760 514900992 2.170000e-51 213.0
30 TraesCS2A01G226900 chr2D 93.405 1122 59 1 904 2010 28065325 28064204 0.000000e+00 1648.0
31 TraesCS2A01G226900 chr2D 97.015 335 10 0 1 335 255682200 255682534 5.200000e-157 564.0
32 TraesCS2A01G226900 chr2D 84.483 232 33 3 335 564 635814722 635814492 2.790000e-55 226.0
33 TraesCS2A01G226900 chr2D 89.888 178 13 4 336 510 627149549 627149724 1.000000e-54 224.0
34 TraesCS2A01G226900 chr5D 88.820 1297 117 8 905 2185 4351052 4352336 0.000000e+00 1567.0
35 TraesCS2A01G226900 chr5D 93.756 993 47 1 1207 2184 514936497 514937489 0.000000e+00 1476.0
36 TraesCS2A01G226900 chr5D 95.285 509 23 1 2180 2687 250593203 250593711 0.000000e+00 806.0
37 TraesCS2A01G226900 chr5D 95.088 509 24 1 2180 2687 544686441 544685933 0.000000e+00 800.0
38 TraesCS2A01G226900 chr5D 87.215 219 23 5 336 552 275606489 275606704 7.700000e-61 244.0
39 TraesCS2A01G226900 chr5D 86.598 194 25 1 336 528 393870115 393869922 2.170000e-51 213.0
40 TraesCS2A01G226900 chr5D 96.907 97 2 1 2687 2783 250593628 250593723 7.980000e-36 161.0
41 TraesCS2A01G226900 chr5D 97.297 37 1 0 264 300 543223184 543223148 2.310000e-06 63.9
42 TraesCS2A01G226900 chr7B 88.423 1287 140 6 905 2185 60425524 60426807 0.000000e+00 1543.0
43 TraesCS2A01G226900 chr7B 89.944 179 13 4 336 510 559016016 559015839 2.790000e-55 226.0
44 TraesCS2A01G226900 chr3B 87.706 1033 105 10 580 1608 814779139 814780153 0.000000e+00 1184.0
45 TraesCS2A01G226900 chr3B 85.019 267 34 5 336 597 814778775 814779040 1.640000e-67 267.0
46 TraesCS2A01G226900 chr1B 96.086 511 19 1 2178 2687 262089236 262089746 0.000000e+00 832.0
47 TraesCS2A01G226900 chr1B 86.957 207 22 5 336 538 133434589 133434794 7.750000e-56 228.0
48 TraesCS2A01G226900 chr5A 95.686 510 21 1 2179 2687 475317321 475316812 0.000000e+00 819.0
49 TraesCS2A01G226900 chr5B 95.499 511 22 1 2178 2687 686545545 686545035 0.000000e+00 815.0
50 TraesCS2A01G226900 chr5B 87.923 207 20 5 336 538 102601288 102601083 3.580000e-59 239.0
51 TraesCS2A01G226900 chr5B 97.917 96 1 1 2687 2782 686545118 686545024 6.170000e-37 165.0
52 TraesCS2A01G226900 chr5B 95.349 43 2 0 260 302 699434858 699434900 4.970000e-08 69.4
53 TraesCS2A01G226900 chr7A 90.155 193 15 4 336 526 679844583 679844773 5.950000e-62 248.0
54 TraesCS2A01G226900 chr7A 96.939 98 2 1 2686 2783 91650195 91650099 2.220000e-36 163.0
55 TraesCS2A01G226900 chr1A 87.923 207 20 5 336 538 534100205 534100410 3.580000e-59 239.0
56 TraesCS2A01G226900 chr1A 88.525 183 16 5 336 515 438664406 438664586 1.680000e-52 217.0
57 TraesCS2A01G226900 chr1A 97.938 97 1 1 2687 2783 582270919 582271014 1.710000e-37 167.0
58 TraesCS2A01G226900 chr6D 89.062 192 19 2 336 526 291787255 291787445 1.290000e-58 237.0
59 TraesCS2A01G226900 chr6D 96.907 97 2 1 2687 2783 459387957 459387862 7.980000e-36 161.0
60 TraesCS2A01G226900 chr6D 89.516 124 12 1 336 458 21027722 21027845 3.710000e-34 156.0
61 TraesCS2A01G226900 chr6D 88.618 123 14 0 336 458 291792283 291792405 1.730000e-32 150.0
62 TraesCS2A01G226900 chrUn 87.293 181 17 4 333 510 83944871 83945048 4.700000e-48 202.0
63 TraesCS2A01G226900 chrUn 91.935 124 9 1 337 459 47387321 47387198 3.690000e-39 172.0
64 TraesCS2A01G226900 chrUn 91.935 124 9 1 337 459 240790195 240790318 3.690000e-39 172.0
65 TraesCS2A01G226900 chrUn 91.935 124 9 1 337 459 347256394 347256517 3.690000e-39 172.0
66 TraesCS2A01G226900 chrUn 91.935 124 9 1 337 459 408076132 408076255 3.690000e-39 172.0
67 TraesCS2A01G226900 chrUn 91.935 124 9 1 337 459 454713306 454713429 3.690000e-39 172.0
68 TraesCS2A01G226900 chrUn 96.907 97 2 1 2687 2783 95738367 95738272 7.980000e-36 161.0
69 TraesCS2A01G226900 chrUn 88.095 126 10 4 336 458 300552382 300552259 8.030000e-31 145.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G226900 chr2A 236830836 236833618 2782 True 5140.0 5140 100.0000 1 2783 1 chr2A.!!$R1 2782
1 TraesCS2A01G226900 chr4A 724743060 724745022 1962 False 1234.0 2159 89.3400 333 2184 2 chr4A.!!$F1 1851
2 TraesCS2A01G226900 chr4A 479618354 479620370 2016 True 1055.0 1829 91.8115 336 2184 2 chr4A.!!$R2 1848
3 TraesCS2A01G226900 chr4A 513335805 513336311 506 True 806.0 806 95.2940 2179 2687 1 chr4A.!!$R1 508
4 TraesCS2A01G226900 chr1D 326162585 326163999 1414 False 1923.0 1923 91.3410 774 2184 1 chr1D.!!$F2 1410
5 TraesCS2A01G226900 chr7D 566458778 566460074 1296 True 1910.0 1910 93.4460 904 2184 1 chr7D.!!$R4 1280
6 TraesCS2A01G226900 chr7D 58798132 58799480 1348 True 1836.0 1836 91.4880 855 2184 1 chr7D.!!$R2 1329
7 TraesCS2A01G226900 chr7D 292263601 292264880 1279 False 1712.0 1712 91.0160 920 2184 1 chr7D.!!$F3 1264
8 TraesCS2A01G226900 chr7D 2892955 2893463 508 False 811.0 811 95.4810 2180 2687 1 chr7D.!!$F1 507
9 TraesCS2A01G226900 chr7D 20293002 20293511 509 True 802.0 802 95.0980 2179 2687 1 chr7D.!!$R1 508
10 TraesCS2A01G226900 chr2B 51109030 51111004 1974 False 1086.5 1882 87.2455 335 2185 2 chr2B.!!$F1 1850
11 TraesCS2A01G226900 chr4D 504005473 504006812 1339 True 1862.0 1862 91.9080 854 2184 1 chr4D.!!$R3 1330
12 TraesCS2A01G226900 chr4D 64352708 64353996 1288 True 1820.0 1820 92.3260 910 2184 1 chr4D.!!$R1 1274
13 TraesCS2A01G226900 chr3D 3343895 3345221 1326 True 1858.0 1858 92.0840 854 2175 1 chr3D.!!$R1 1321
14 TraesCS2A01G226900 chr3D 92862560 92863835 1275 True 1825.0 1825 92.6620 920 2184 1 chr3D.!!$R2 1264
15 TraesCS2A01G226900 chr3D 609638888 609640199 1311 True 1818.0 1818 91.9270 893 2184 1 chr3D.!!$R3 1291
16 TraesCS2A01G226900 chr3D 443417217 443417725 508 False 828.0 828 96.0710 2180 2687 1 chr3D.!!$F1 507
17 TraesCS2A01G226900 chr2D 28064204 28065325 1121 True 1648.0 1648 93.4050 904 2010 1 chr2D.!!$R1 1106
18 TraesCS2A01G226900 chr5D 4351052 4352336 1284 False 1567.0 1567 88.8200 905 2185 1 chr5D.!!$F1 1280
19 TraesCS2A01G226900 chr5D 514936497 514937489 992 False 1476.0 1476 93.7560 1207 2184 1 chr5D.!!$F3 977
20 TraesCS2A01G226900 chr5D 544685933 544686441 508 True 800.0 800 95.0880 2180 2687 1 chr5D.!!$R3 507
21 TraesCS2A01G226900 chr5D 250593203 250593723 520 False 483.5 806 96.0960 2180 2783 2 chr5D.!!$F4 603
22 TraesCS2A01G226900 chr7B 60425524 60426807 1283 False 1543.0 1543 88.4230 905 2185 1 chr7B.!!$F1 1280
23 TraesCS2A01G226900 chr3B 814778775 814780153 1378 False 725.5 1184 86.3625 336 1608 2 chr3B.!!$F1 1272
24 TraesCS2A01G226900 chr1B 262089236 262089746 510 False 832.0 832 96.0860 2178 2687 1 chr1B.!!$F2 509
25 TraesCS2A01G226900 chr5A 475316812 475317321 509 True 819.0 819 95.6860 2179 2687 1 chr5A.!!$R1 508
26 TraesCS2A01G226900 chr5B 686545024 686545545 521 True 490.0 815 96.7080 2178 2782 2 chr5B.!!$R2 604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
36 37 0.035458 CCAGTGTCTTGGGTGGAGAC 59.965 60.0 0.00 0.0 42.98 3.36 F
40 41 0.105194 TGTCTTGGGTGGAGACAGGA 60.105 55.0 3.03 0.0 46.21 3.86 F
108 109 0.109086 CTACGCCCACACTCTCACTG 60.109 60.0 0.00 0.0 0.00 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1460 1833 1.072806 AGATGGCAGAGCACTGTGAAA 59.927 47.619 12.86 0.0 45.04 2.69 R
1631 2004 1.681793 CCGAGATAGGAACACGACCAT 59.318 52.381 0.00 0.0 0.00 3.55 R
1832 2222 2.183555 GACCGGGAGCAGTAACCG 59.816 66.667 6.32 0.0 46.79 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.528043 TGTTAATGCAAACAATCCAGTGT 57.472 34.783 1.43 0.00 36.45 3.55
24 25 5.527951 TGTTAATGCAAACAATCCAGTGTC 58.472 37.500 1.43 0.00 36.45 3.67
25 26 5.301551 TGTTAATGCAAACAATCCAGTGTCT 59.698 36.000 1.43 0.00 36.45 3.41
26 27 4.942761 AATGCAAACAATCCAGTGTCTT 57.057 36.364 0.00 0.00 0.00 3.01
27 28 3.713858 TGCAAACAATCCAGTGTCTTG 57.286 42.857 0.00 0.00 0.00 3.02
28 29 2.361757 TGCAAACAATCCAGTGTCTTGG 59.638 45.455 6.80 0.00 39.70 3.61
29 30 2.288395 GCAAACAATCCAGTGTCTTGGG 60.288 50.000 6.80 0.00 38.81 4.12
30 31 2.958355 CAAACAATCCAGTGTCTTGGGT 59.042 45.455 6.80 0.00 38.81 4.51
31 32 2.276732 ACAATCCAGTGTCTTGGGTG 57.723 50.000 6.80 0.00 38.81 4.61
32 33 1.202927 ACAATCCAGTGTCTTGGGTGG 60.203 52.381 6.80 0.00 38.81 4.61
33 34 1.073763 CAATCCAGTGTCTTGGGTGGA 59.926 52.381 0.00 0.00 43.23 4.02
34 35 0.987294 ATCCAGTGTCTTGGGTGGAG 59.013 55.000 0.00 0.00 42.35 3.86
35 36 0.105194 TCCAGTGTCTTGGGTGGAGA 60.105 55.000 0.00 0.00 38.81 3.71
36 37 0.035458 CCAGTGTCTTGGGTGGAGAC 59.965 60.000 0.00 0.00 42.98 3.36
39 40 2.452116 TGTCTTGGGTGGAGACAGG 58.548 57.895 3.03 0.00 46.21 4.00
40 41 0.105194 TGTCTTGGGTGGAGACAGGA 60.105 55.000 3.03 0.00 46.21 3.86
41 42 1.056660 GTCTTGGGTGGAGACAGGAA 58.943 55.000 0.00 0.00 44.46 3.36
42 43 1.630878 GTCTTGGGTGGAGACAGGAAT 59.369 52.381 0.00 0.00 44.46 3.01
43 44 1.630369 TCTTGGGTGGAGACAGGAATG 59.370 52.381 0.00 0.00 44.46 2.67
44 45 1.630369 CTTGGGTGGAGACAGGAATGA 59.370 52.381 0.00 0.00 44.46 2.57
45 46 1.971149 TGGGTGGAGACAGGAATGAT 58.029 50.000 0.00 0.00 44.46 2.45
46 47 1.561076 TGGGTGGAGACAGGAATGATG 59.439 52.381 0.00 0.00 44.46 3.07
47 48 1.839994 GGGTGGAGACAGGAATGATGA 59.160 52.381 0.00 0.00 44.46 2.92
48 49 2.158842 GGGTGGAGACAGGAATGATGAG 60.159 54.545 0.00 0.00 44.46 2.90
49 50 2.559440 GTGGAGACAGGAATGATGAGC 58.441 52.381 0.00 0.00 44.46 4.26
50 51 2.170187 GTGGAGACAGGAATGATGAGCT 59.830 50.000 0.00 0.00 44.46 4.09
51 52 2.433604 TGGAGACAGGAATGATGAGCTC 59.566 50.000 6.82 6.82 35.01 4.09
52 53 2.433604 GGAGACAGGAATGATGAGCTCA 59.566 50.000 20.79 20.79 38.53 4.26
53 54 3.118482 GGAGACAGGAATGATGAGCTCAA 60.118 47.826 22.50 5.35 37.44 3.02
54 55 4.121317 GAGACAGGAATGATGAGCTCAAG 58.879 47.826 22.50 5.95 37.44 3.02
55 56 3.773667 AGACAGGAATGATGAGCTCAAGA 59.226 43.478 22.50 10.64 37.44 3.02
56 57 4.409574 AGACAGGAATGATGAGCTCAAGAT 59.590 41.667 22.50 12.62 37.44 2.40
57 58 4.706035 ACAGGAATGATGAGCTCAAGATC 58.294 43.478 22.50 14.61 37.44 2.75
58 59 3.741856 CAGGAATGATGAGCTCAAGATCG 59.258 47.826 22.50 0.98 37.44 3.69
59 60 3.065655 GGAATGATGAGCTCAAGATCGG 58.934 50.000 22.50 0.00 37.44 4.18
60 61 2.835580 ATGATGAGCTCAAGATCGGG 57.164 50.000 22.50 0.00 37.44 5.14
61 62 1.780503 TGATGAGCTCAAGATCGGGA 58.219 50.000 22.50 0.00 32.18 5.14
62 63 1.685517 TGATGAGCTCAAGATCGGGAG 59.314 52.381 22.50 11.09 32.18 4.30
63 64 1.000731 GATGAGCTCAAGATCGGGAGG 59.999 57.143 22.50 2.01 32.18 4.30
64 65 1.068921 GAGCTCAAGATCGGGAGGC 59.931 63.158 9.40 9.54 0.00 4.70
65 66 2.279784 GCTCAAGATCGGGAGGCG 60.280 66.667 15.53 0.00 0.00 5.52
66 67 2.419198 CTCAAGATCGGGAGGCGG 59.581 66.667 8.35 0.00 0.00 6.13
67 68 3.154473 TCAAGATCGGGAGGCGGG 61.154 66.667 0.00 0.00 0.00 6.13
68 69 4.918201 CAAGATCGGGAGGCGGGC 62.918 72.222 0.00 0.00 0.00 6.13
81 82 3.121030 CGGGCGGTTCTTGCTCTG 61.121 66.667 0.00 0.00 0.00 3.35
82 83 3.435186 GGGCGGTTCTTGCTCTGC 61.435 66.667 0.00 0.00 35.47 4.26
83 84 2.359230 GGCGGTTCTTGCTCTGCT 60.359 61.111 0.00 0.00 36.35 4.24
84 85 2.394563 GGCGGTTCTTGCTCTGCTC 61.395 63.158 0.00 0.00 36.35 4.26
85 86 2.394563 GCGGTTCTTGCTCTGCTCC 61.395 63.158 0.00 0.00 33.68 4.70
86 87 1.294780 CGGTTCTTGCTCTGCTCCT 59.705 57.895 0.00 0.00 0.00 3.69
87 88 1.018226 CGGTTCTTGCTCTGCTCCTG 61.018 60.000 0.00 0.00 0.00 3.86
88 89 0.676151 GGTTCTTGCTCTGCTCCTGG 60.676 60.000 0.00 0.00 0.00 4.45
89 90 1.002868 TTCTTGCTCTGCTCCTGGC 60.003 57.895 0.00 0.00 42.22 4.85
90 91 1.486997 TTCTTGCTCTGCTCCTGGCT 61.487 55.000 0.00 0.00 42.39 4.75
91 92 0.615827 TCTTGCTCTGCTCCTGGCTA 60.616 55.000 0.00 0.00 42.39 3.93
92 93 0.461693 CTTGCTCTGCTCCTGGCTAC 60.462 60.000 0.00 0.00 42.39 3.58
93 94 2.105930 GCTCTGCTCCTGGCTACG 59.894 66.667 0.00 0.00 42.39 3.51
94 95 2.105930 CTCTGCTCCTGGCTACGC 59.894 66.667 0.00 0.00 42.39 4.42
104 105 2.184579 GGCTACGCCCACACTCTC 59.815 66.667 0.00 0.00 44.06 3.20
105 106 2.646175 GGCTACGCCCACACTCTCA 61.646 63.158 0.00 0.00 44.06 3.27
106 107 1.446272 GCTACGCCCACACTCTCAC 60.446 63.158 0.00 0.00 0.00 3.51
107 108 1.878656 GCTACGCCCACACTCTCACT 61.879 60.000 0.00 0.00 0.00 3.41
108 109 0.109086 CTACGCCCACACTCTCACTG 60.109 60.000 0.00 0.00 0.00 3.66
109 110 2.154798 TACGCCCACACTCTCACTGC 62.155 60.000 0.00 0.00 0.00 4.40
110 111 2.359230 GCCCACACTCTCACTGCC 60.359 66.667 0.00 0.00 0.00 4.85
111 112 2.888447 GCCCACACTCTCACTGCCT 61.888 63.158 0.00 0.00 0.00 4.75
112 113 1.757306 CCCACACTCTCACTGCCTT 59.243 57.895 0.00 0.00 0.00 4.35
113 114 0.109342 CCCACACTCTCACTGCCTTT 59.891 55.000 0.00 0.00 0.00 3.11
114 115 1.517242 CCACACTCTCACTGCCTTTC 58.483 55.000 0.00 0.00 0.00 2.62
115 116 1.071385 CCACACTCTCACTGCCTTTCT 59.929 52.381 0.00 0.00 0.00 2.52
116 117 2.411904 CACACTCTCACTGCCTTTCTC 58.588 52.381 0.00 0.00 0.00 2.87
117 118 1.346068 ACACTCTCACTGCCTTTCTCC 59.654 52.381 0.00 0.00 0.00 3.71
118 119 0.605589 ACTCTCACTGCCTTTCTCCG 59.394 55.000 0.00 0.00 0.00 4.63
119 120 0.739112 CTCTCACTGCCTTTCTCCGC 60.739 60.000 0.00 0.00 0.00 5.54
120 121 1.743252 CTCACTGCCTTTCTCCGCC 60.743 63.158 0.00 0.00 0.00 6.13
121 122 2.747855 CACTGCCTTTCTCCGCCC 60.748 66.667 0.00 0.00 0.00 6.13
122 123 3.249189 ACTGCCTTTCTCCGCCCA 61.249 61.111 0.00 0.00 0.00 5.36
123 124 2.747855 CTGCCTTTCTCCGCCCAC 60.748 66.667 0.00 0.00 0.00 4.61
124 125 4.697756 TGCCTTTCTCCGCCCACG 62.698 66.667 0.00 0.00 39.67 4.94
127 128 4.697756 CTTTCTCCGCCCACGCCA 62.698 66.667 0.00 0.00 38.22 5.69
128 129 4.257654 TTTCTCCGCCCACGCCAA 62.258 61.111 0.00 0.00 38.22 4.52
129 130 4.697756 TTCTCCGCCCACGCCAAG 62.698 66.667 0.00 0.00 38.22 3.61
135 136 3.365265 GCCCACGCCAAGACCAAG 61.365 66.667 0.00 0.00 0.00 3.61
136 137 2.429930 CCCACGCCAAGACCAAGA 59.570 61.111 0.00 0.00 0.00 3.02
137 138 1.966451 CCCACGCCAAGACCAAGAC 60.966 63.158 0.00 0.00 0.00 3.01
138 139 1.966451 CCACGCCAAGACCAAGACC 60.966 63.158 0.00 0.00 0.00 3.85
139 140 1.227823 CACGCCAAGACCAAGACCA 60.228 57.895 0.00 0.00 0.00 4.02
140 141 0.606401 CACGCCAAGACCAAGACCAT 60.606 55.000 0.00 0.00 0.00 3.55
141 142 0.981183 ACGCCAAGACCAAGACCATA 59.019 50.000 0.00 0.00 0.00 2.74
142 143 1.349688 ACGCCAAGACCAAGACCATAA 59.650 47.619 0.00 0.00 0.00 1.90
143 144 2.224670 ACGCCAAGACCAAGACCATAAA 60.225 45.455 0.00 0.00 0.00 1.40
144 145 3.016736 CGCCAAGACCAAGACCATAAAT 58.983 45.455 0.00 0.00 0.00 1.40
145 146 3.065371 CGCCAAGACCAAGACCATAAATC 59.935 47.826 0.00 0.00 0.00 2.17
146 147 3.381590 GCCAAGACCAAGACCATAAATCC 59.618 47.826 0.00 0.00 0.00 3.01
147 148 4.860022 CCAAGACCAAGACCATAAATCCT 58.140 43.478 0.00 0.00 0.00 3.24
148 149 5.264395 CCAAGACCAAGACCATAAATCCTT 58.736 41.667 0.00 0.00 0.00 3.36
149 150 6.423182 CCAAGACCAAGACCATAAATCCTTA 58.577 40.000 0.00 0.00 0.00 2.69
150 151 7.062957 CCAAGACCAAGACCATAAATCCTTAT 58.937 38.462 0.00 0.00 0.00 1.73
151 152 7.013655 CCAAGACCAAGACCATAAATCCTTATG 59.986 40.741 0.00 0.00 42.79 1.90
152 153 7.451731 AGACCAAGACCATAAATCCTTATGA 57.548 36.000 6.47 0.00 44.99 2.15
153 154 8.050316 AGACCAAGACCATAAATCCTTATGAT 57.950 34.615 6.47 0.00 44.99 2.45
154 155 7.941238 AGACCAAGACCATAAATCCTTATGATG 59.059 37.037 6.47 1.74 44.99 3.07
155 156 7.815383 ACCAAGACCATAAATCCTTATGATGA 58.185 34.615 6.47 0.00 44.99 2.92
156 157 8.281531 ACCAAGACCATAAATCCTTATGATGAA 58.718 33.333 6.47 0.00 44.99 2.57
157 158 9.135189 CCAAGACCATAAATCCTTATGATGAAA 57.865 33.333 6.47 0.00 44.99 2.69
160 161 9.566432 AGACCATAAATCCTTATGATGAAAGAC 57.434 33.333 6.47 0.00 44.99 3.01
161 162 8.383318 ACCATAAATCCTTATGATGAAAGACG 57.617 34.615 6.47 0.00 44.99 4.18
162 163 7.041098 ACCATAAATCCTTATGATGAAAGACGC 60.041 37.037 6.47 0.00 44.99 5.19
163 164 7.173907 CCATAAATCCTTATGATGAAAGACGCT 59.826 37.037 6.47 0.00 44.99 5.07
164 165 8.562892 CATAAATCCTTATGATGAAAGACGCTT 58.437 33.333 0.00 0.00 44.99 4.68
165 166 5.998454 ATCCTTATGATGAAAGACGCTTG 57.002 39.130 0.00 0.00 30.54 4.01
166 167 3.623060 TCCTTATGATGAAAGACGCTTGC 59.377 43.478 0.00 0.00 0.00 4.01
167 168 3.624861 CCTTATGATGAAAGACGCTTGCT 59.375 43.478 0.32 0.00 0.00 3.91
168 169 4.095483 CCTTATGATGAAAGACGCTTGCTT 59.905 41.667 0.32 0.00 0.00 3.91
169 170 3.754188 ATGATGAAAGACGCTTGCTTC 57.246 42.857 6.55 6.55 0.00 3.86
170 171 2.493035 TGATGAAAGACGCTTGCTTCA 58.507 42.857 10.22 10.22 0.00 3.02
171 172 2.481568 TGATGAAAGACGCTTGCTTCAG 59.518 45.455 10.22 0.00 0.00 3.02
172 173 0.588252 TGAAAGACGCTTGCTTCAGC 59.412 50.000 2.14 0.00 42.50 4.26
187 188 4.233005 GCTTCAGCAGAACAAGAAAATCC 58.767 43.478 0.00 0.00 41.59 3.01
188 189 4.261741 GCTTCAGCAGAACAAGAAAATCCA 60.262 41.667 0.00 0.00 41.59 3.41
189 190 5.443185 TTCAGCAGAACAAGAAAATCCAG 57.557 39.130 0.00 0.00 0.00 3.86
190 191 3.822735 TCAGCAGAACAAGAAAATCCAGG 59.177 43.478 0.00 0.00 0.00 4.45
191 192 3.822735 CAGCAGAACAAGAAAATCCAGGA 59.177 43.478 0.00 0.00 0.00 3.86
192 193 4.279169 CAGCAGAACAAGAAAATCCAGGAA 59.721 41.667 0.00 0.00 0.00 3.36
193 194 4.522022 AGCAGAACAAGAAAATCCAGGAAG 59.478 41.667 0.00 0.00 0.00 3.46
194 195 4.802999 CAGAACAAGAAAATCCAGGAAGC 58.197 43.478 0.00 0.00 0.00 3.86
195 196 3.829026 AGAACAAGAAAATCCAGGAAGCC 59.171 43.478 0.00 0.00 0.00 4.35
196 197 3.243359 ACAAGAAAATCCAGGAAGCCA 57.757 42.857 0.00 0.00 0.00 4.75
197 198 3.575805 ACAAGAAAATCCAGGAAGCCAA 58.424 40.909 0.00 0.00 0.00 4.52
198 199 3.321968 ACAAGAAAATCCAGGAAGCCAAC 59.678 43.478 0.00 0.00 0.00 3.77
199 200 2.529632 AGAAAATCCAGGAAGCCAACC 58.470 47.619 0.00 0.00 0.00 3.77
200 201 1.202348 GAAAATCCAGGAAGCCAACCG 59.798 52.381 0.00 0.00 0.00 4.44
201 202 0.112412 AAATCCAGGAAGCCAACCGT 59.888 50.000 0.00 0.00 0.00 4.83
202 203 0.609131 AATCCAGGAAGCCAACCGTG 60.609 55.000 0.00 0.00 0.00 4.94
203 204 3.365265 CCAGGAAGCCAACCGTGC 61.365 66.667 0.00 0.00 0.00 5.34
204 205 2.594303 CAGGAAGCCAACCGTGCA 60.594 61.111 0.00 0.00 0.00 4.57
205 206 2.594592 AGGAAGCCAACCGTGCAC 60.595 61.111 6.82 6.82 0.00 4.57
206 207 3.670377 GGAAGCCAACCGTGCACC 61.670 66.667 12.15 0.00 0.00 5.01
207 208 2.594592 GAAGCCAACCGTGCACCT 60.595 61.111 12.15 0.00 0.00 4.00
208 209 2.906897 AAGCCAACCGTGCACCTG 60.907 61.111 12.15 5.29 0.00 4.00
209 210 3.414136 AAGCCAACCGTGCACCTGA 62.414 57.895 12.15 0.00 0.00 3.86
210 211 2.672996 GCCAACCGTGCACCTGAT 60.673 61.111 12.15 0.00 0.00 2.90
211 212 2.981560 GCCAACCGTGCACCTGATG 61.982 63.158 12.15 7.73 0.00 3.07
212 213 1.302431 CCAACCGTGCACCTGATGA 60.302 57.895 12.15 0.00 0.00 2.92
213 214 0.677731 CCAACCGTGCACCTGATGAT 60.678 55.000 12.15 0.00 0.00 2.45
214 215 1.167851 CAACCGTGCACCTGATGATT 58.832 50.000 12.15 0.00 0.00 2.57
215 216 1.541147 CAACCGTGCACCTGATGATTT 59.459 47.619 12.15 0.00 0.00 2.17
216 217 1.453155 ACCGTGCACCTGATGATTTC 58.547 50.000 12.15 0.00 0.00 2.17
217 218 0.734889 CCGTGCACCTGATGATTTCC 59.265 55.000 12.15 0.00 0.00 3.13
218 219 0.734889 CGTGCACCTGATGATTTCCC 59.265 55.000 12.15 0.00 0.00 3.97
219 220 1.838112 GTGCACCTGATGATTTCCCA 58.162 50.000 5.22 0.00 0.00 4.37
220 221 2.170166 GTGCACCTGATGATTTCCCAA 58.830 47.619 5.22 0.00 0.00 4.12
221 222 2.562298 GTGCACCTGATGATTTCCCAAA 59.438 45.455 5.22 0.00 0.00 3.28
222 223 2.562298 TGCACCTGATGATTTCCCAAAC 59.438 45.455 0.00 0.00 0.00 2.93
223 224 2.827921 GCACCTGATGATTTCCCAAACT 59.172 45.455 0.00 0.00 0.00 2.66
224 225 3.259123 GCACCTGATGATTTCCCAAACTT 59.741 43.478 0.00 0.00 0.00 2.66
225 226 4.619160 GCACCTGATGATTTCCCAAACTTC 60.619 45.833 0.00 0.00 0.00 3.01
226 227 4.523943 CACCTGATGATTTCCCAAACTTCA 59.476 41.667 0.00 0.00 0.00 3.02
227 228 5.186409 CACCTGATGATTTCCCAAACTTCAT 59.814 40.000 0.00 0.00 0.00 2.57
228 229 5.420104 ACCTGATGATTTCCCAAACTTCATC 59.580 40.000 0.00 0.00 41.83 2.92
229 230 5.419788 CCTGATGATTTCCCAAACTTCATCA 59.580 40.000 11.96 11.96 46.22 3.07
230 231 6.519679 TGATGATTTCCCAAACTTCATCAG 57.480 37.500 9.23 0.00 44.56 2.90
231 232 6.247676 TGATGATTTCCCAAACTTCATCAGA 58.752 36.000 9.23 0.00 44.56 3.27
232 233 6.376299 TGATGATTTCCCAAACTTCATCAGAG 59.624 38.462 9.23 0.00 44.56 3.35
233 234 5.879763 TGATTTCCCAAACTTCATCAGAGA 58.120 37.500 0.00 0.00 0.00 3.10
234 235 6.306199 TGATTTCCCAAACTTCATCAGAGAA 58.694 36.000 0.00 0.00 0.00 2.87
238 239 3.755378 CCCAAACTTCATCAGAGAAGGTG 59.245 47.826 8.38 5.88 44.44 4.00
239 240 4.505566 CCCAAACTTCATCAGAGAAGGTGA 60.506 45.833 8.38 0.00 44.44 4.02
240 241 5.251764 CCAAACTTCATCAGAGAAGGTGAT 58.748 41.667 8.38 0.00 44.44 3.06
241 242 5.353678 CCAAACTTCATCAGAGAAGGTGATC 59.646 44.000 8.38 0.00 44.44 2.92
242 243 5.936372 CAAACTTCATCAGAGAAGGTGATCA 59.064 40.000 8.38 0.00 44.44 2.92
243 244 6.598457 CAAACTTCATCAGAGAAGGTGATCAT 59.402 38.462 0.00 0.00 44.44 2.45
244 245 6.598457 AAACTTCATCAGAGAAGGTGATCATG 59.402 38.462 0.00 0.00 44.44 3.07
245 246 5.672503 CTTCATCAGAGAAGGTGATCATGT 58.327 41.667 0.00 0.00 40.98 3.21
246 247 5.273674 TCATCAGAGAAGGTGATCATGTC 57.726 43.478 0.00 0.00 32.06 3.06
247 248 4.100653 TCATCAGAGAAGGTGATCATGTCC 59.899 45.833 0.00 0.00 32.06 4.02
248 249 2.768527 TCAGAGAAGGTGATCATGTCCC 59.231 50.000 0.00 0.00 0.00 4.46
249 250 2.502947 CAGAGAAGGTGATCATGTCCCA 59.497 50.000 0.00 0.00 0.00 4.37
250 251 3.136077 CAGAGAAGGTGATCATGTCCCAT 59.864 47.826 0.00 0.00 0.00 4.00
251 252 3.784763 AGAGAAGGTGATCATGTCCCATT 59.215 43.478 0.00 0.00 0.00 3.16
252 253 4.971282 AGAGAAGGTGATCATGTCCCATTA 59.029 41.667 0.00 0.00 0.00 1.90
253 254 5.610132 AGAGAAGGTGATCATGTCCCATTAT 59.390 40.000 0.00 0.00 0.00 1.28
254 255 5.874093 AGAAGGTGATCATGTCCCATTATC 58.126 41.667 0.00 0.00 0.00 1.75
255 256 5.610132 AGAAGGTGATCATGTCCCATTATCT 59.390 40.000 0.00 0.00 0.00 1.98
256 257 6.789457 AGAAGGTGATCATGTCCCATTATCTA 59.211 38.462 0.00 0.00 0.00 1.98
257 258 7.460402 AGAAGGTGATCATGTCCCATTATCTAT 59.540 37.037 0.00 0.00 0.00 1.98
258 259 6.955364 AGGTGATCATGTCCCATTATCTATG 58.045 40.000 0.00 0.00 0.00 2.23
259 260 6.503217 AGGTGATCATGTCCCATTATCTATGT 59.497 38.462 0.00 0.00 31.99 2.29
260 261 7.679881 AGGTGATCATGTCCCATTATCTATGTA 59.320 37.037 0.00 0.00 31.99 2.29
261 262 8.489489 GGTGATCATGTCCCATTATCTATGTAT 58.511 37.037 0.00 0.00 31.99 2.29
262 263 9.322773 GTGATCATGTCCCATTATCTATGTATG 57.677 37.037 0.00 0.00 31.99 2.39
263 264 9.050154 TGATCATGTCCCATTATCTATGTATGT 57.950 33.333 0.00 0.00 31.99 2.29
266 267 9.547279 TCATGTCCCATTATCTATGTATGTAGT 57.453 33.333 0.00 0.00 31.99 2.73
271 272 9.696572 TCCCATTATCTATGTATGTAGTACTCC 57.303 37.037 0.00 0.00 34.27 3.85
272 273 8.915036 CCCATTATCTATGTATGTAGTACTCCC 58.085 40.741 0.00 0.00 34.27 4.30
273 274 9.702253 CCATTATCTATGTATGTAGTACTCCCT 57.298 37.037 0.00 0.00 34.27 4.20
276 277 9.961264 TTATCTATGTATGTAGTACTCCCTCTG 57.039 37.037 0.00 0.00 34.27 3.35
277 278 6.239396 TCTATGTATGTAGTACTCCCTCTGC 58.761 44.000 0.00 0.00 34.27 4.26
278 279 4.245251 TGTATGTAGTACTCCCTCTGCA 57.755 45.455 0.00 0.00 34.27 4.41
279 280 4.606210 TGTATGTAGTACTCCCTCTGCAA 58.394 43.478 0.00 0.00 34.27 4.08
280 281 5.020795 TGTATGTAGTACTCCCTCTGCAAA 58.979 41.667 0.00 0.00 34.27 3.68
281 282 4.744795 ATGTAGTACTCCCTCTGCAAAG 57.255 45.455 0.00 0.00 31.06 2.77
282 283 3.774734 TGTAGTACTCCCTCTGCAAAGA 58.225 45.455 0.00 0.00 0.00 2.52
283 284 4.157246 TGTAGTACTCCCTCTGCAAAGAA 58.843 43.478 0.00 0.00 0.00 2.52
284 285 4.591498 TGTAGTACTCCCTCTGCAAAGAAA 59.409 41.667 0.00 0.00 0.00 2.52
285 286 4.917906 AGTACTCCCTCTGCAAAGAAAT 57.082 40.909 0.00 0.00 0.00 2.17
286 287 6.439375 TGTAGTACTCCCTCTGCAAAGAAATA 59.561 38.462 0.00 0.00 0.00 1.40
287 288 5.735766 AGTACTCCCTCTGCAAAGAAATAC 58.264 41.667 0.00 0.00 0.00 1.89
288 289 4.640771 ACTCCCTCTGCAAAGAAATACA 57.359 40.909 0.00 0.00 0.00 2.29
289 290 4.985538 ACTCCCTCTGCAAAGAAATACAA 58.014 39.130 0.00 0.00 0.00 2.41
290 291 5.006386 ACTCCCTCTGCAAAGAAATACAAG 58.994 41.667 0.00 0.00 0.00 3.16
291 292 5.221925 ACTCCCTCTGCAAAGAAATACAAGA 60.222 40.000 0.00 0.00 0.00 3.02
292 293 5.248640 TCCCTCTGCAAAGAAATACAAGAG 58.751 41.667 0.00 0.00 0.00 2.85
293 294 4.142513 CCCTCTGCAAAGAAATACAAGAGC 60.143 45.833 0.00 0.00 0.00 4.09
294 295 4.142513 CCTCTGCAAAGAAATACAAGAGCC 60.143 45.833 0.00 0.00 0.00 4.70
295 296 4.655963 TCTGCAAAGAAATACAAGAGCCT 58.344 39.130 0.00 0.00 0.00 4.58
296 297 5.072741 TCTGCAAAGAAATACAAGAGCCTT 58.927 37.500 0.00 0.00 0.00 4.35
297 298 5.536161 TCTGCAAAGAAATACAAGAGCCTTT 59.464 36.000 0.00 0.00 0.00 3.11
298 299 6.714810 TCTGCAAAGAAATACAAGAGCCTTTA 59.285 34.615 0.00 0.00 0.00 1.85
299 300 6.913170 TGCAAAGAAATACAAGAGCCTTTAG 58.087 36.000 0.00 0.00 0.00 1.85
300 301 6.714810 TGCAAAGAAATACAAGAGCCTTTAGA 59.285 34.615 0.00 0.00 0.00 2.10
301 302 7.394359 TGCAAAGAAATACAAGAGCCTTTAGAT 59.606 33.333 0.00 0.00 0.00 1.98
302 303 7.912773 GCAAAGAAATACAAGAGCCTTTAGATC 59.087 37.037 0.00 0.00 0.00 2.75
303 304 8.950210 CAAAGAAATACAAGAGCCTTTAGATCA 58.050 33.333 0.00 0.00 0.00 2.92
304 305 8.729805 AAGAAATACAAGAGCCTTTAGATCAG 57.270 34.615 0.00 0.00 0.00 2.90
305 306 7.278875 AGAAATACAAGAGCCTTTAGATCAGG 58.721 38.462 0.00 0.00 34.08 3.86
306 307 3.922171 ACAAGAGCCTTTAGATCAGGG 57.078 47.619 0.00 0.00 31.20 4.45
307 308 3.454858 ACAAGAGCCTTTAGATCAGGGA 58.545 45.455 0.00 0.00 31.20 4.20
308 309 4.043596 ACAAGAGCCTTTAGATCAGGGAT 58.956 43.478 0.00 0.00 31.20 3.85
309 310 4.476479 ACAAGAGCCTTTAGATCAGGGATT 59.524 41.667 0.00 0.00 31.20 3.01
310 311 5.667626 ACAAGAGCCTTTAGATCAGGGATTA 59.332 40.000 0.00 0.00 31.20 1.75
311 312 6.331307 ACAAGAGCCTTTAGATCAGGGATTAT 59.669 38.462 0.00 0.00 31.20 1.28
312 313 7.147230 ACAAGAGCCTTTAGATCAGGGATTATT 60.147 37.037 0.00 0.00 31.20 1.40
313 314 7.399674 AGAGCCTTTAGATCAGGGATTATTT 57.600 36.000 0.00 0.00 31.20 1.40
314 315 8.511748 AGAGCCTTTAGATCAGGGATTATTTA 57.488 34.615 0.00 0.00 31.20 1.40
315 316 9.121806 AGAGCCTTTAGATCAGGGATTATTTAT 57.878 33.333 0.00 0.00 31.20 1.40
316 317 9.171877 GAGCCTTTAGATCAGGGATTATTTATG 57.828 37.037 0.00 0.00 31.20 1.90
317 318 8.673251 AGCCTTTAGATCAGGGATTATTTATGT 58.327 33.333 0.00 0.00 31.20 2.29
318 319 9.301897 GCCTTTAGATCAGGGATTATTTATGTT 57.698 33.333 0.00 0.00 31.20 2.71
324 325 9.927081 AGATCAGGGATTATTTATGTTTCTTGT 57.073 29.630 0.00 0.00 0.00 3.16
326 327 8.519799 TCAGGGATTATTTATGTTTCTTGTCC 57.480 34.615 0.00 0.00 0.00 4.02
327 328 8.112822 TCAGGGATTATTTATGTTTCTTGTCCA 58.887 33.333 0.00 0.00 0.00 4.02
328 329 8.917088 CAGGGATTATTTATGTTTCTTGTCCAT 58.083 33.333 0.00 0.00 0.00 3.41
329 330 8.917088 AGGGATTATTTATGTTTCTTGTCCATG 58.083 33.333 0.00 0.00 0.00 3.66
330 331 7.653311 GGGATTATTTATGTTTCTTGTCCATGC 59.347 37.037 0.00 0.00 0.00 4.06
331 332 8.196771 GGATTATTTATGTTTCTTGTCCATGCA 58.803 33.333 0.00 0.00 0.00 3.96
367 370 7.847096 TGTGTATAGTTCATTGTGTACATCCT 58.153 34.615 0.00 0.00 0.00 3.24
418 423 7.907841 TTACCACATCTGTATATGTACTGGT 57.092 36.000 12.87 12.87 38.01 4.00
427 432 4.410555 TGTATATGTACTGGTCATTGGCCA 59.589 41.667 10.11 10.11 34.42 5.36
538 544 1.001248 TAGCCTACTTGCCTCCGGT 59.999 57.895 0.00 0.00 0.00 5.28
648 828 2.607750 TGCCCTTCTCGCCTCCTT 60.608 61.111 0.00 0.00 0.00 3.36
723 954 1.915983 GGGCTCTCGATCCCCTTTT 59.084 57.895 7.68 0.00 36.50 2.27
725 956 0.464554 GGCTCTCGATCCCCTTTTGG 60.465 60.000 0.00 0.00 39.97 3.28
726 957 0.541863 GCTCTCGATCCCCTTTTGGA 59.458 55.000 0.00 0.00 44.07 3.53
778 1009 0.323908 CTCTCTCCAACTCCTCCCGT 60.324 60.000 0.00 0.00 0.00 5.28
999 1371 1.708341 ATGCTGAGTTTGTGGGCTTT 58.292 45.000 0.00 0.00 0.00 3.51
1096 1469 2.691732 CAGTGGCCCCAATCCCAT 59.308 61.111 0.00 0.00 32.95 4.00
1197 1570 6.043590 TGGATGCTTATGATCAACAGGTATCT 59.956 38.462 15.19 0.00 0.00 1.98
1282 1655 0.532115 TGATGCTCGAGCTGCTGTTA 59.468 50.000 35.27 16.07 42.66 2.41
1583 1956 6.627087 TCAGAGGGTTCATGAGTTCTTATT 57.373 37.500 0.00 0.00 0.00 1.40
1594 1967 3.057104 TGAGTTCTTATTTCGTCTCCGCA 60.057 43.478 0.00 0.00 0.00 5.69
1631 2004 1.601759 GGGCTCACTTGCTTGCTCA 60.602 57.895 0.00 0.00 0.00 4.26
1761 2149 0.114364 TCACTGCTCCACCACTCCTA 59.886 55.000 0.00 0.00 0.00 2.94
1832 2222 2.292916 GCGCCGTGACACTTTTTGC 61.293 57.895 3.68 0.00 0.00 3.68
2275 2665 1.205655 CTCCGATGGTTCTCTTGAGCA 59.794 52.381 0.00 0.00 0.00 4.26
2334 2724 1.639298 GCAGGGGCGCGATTATGATC 61.639 60.000 12.10 0.00 0.00 2.92
2381 2772 1.272490 CCACTGTCCGCACTCTTCTTA 59.728 52.381 0.00 0.00 0.00 2.10
2548 2939 3.456277 CCCTCTATGGTCTTAAACAGGCT 59.544 47.826 0.00 0.00 0.00 4.58
2553 2944 2.334977 TGGTCTTAAACAGGCTCCTCA 58.665 47.619 0.00 0.00 0.00 3.86
2622 3013 1.051008 CCCAGTGATCATGATCCCGA 58.949 55.000 28.61 11.19 37.02 5.14
2691 3082 3.183793 TGTTGATGACATGATCCCGAG 57.816 47.619 0.00 0.00 32.00 4.63
2692 3083 2.501316 TGTTGATGACATGATCCCGAGT 59.499 45.455 0.00 0.00 32.00 4.18
2693 3084 2.868583 GTTGATGACATGATCCCGAGTG 59.131 50.000 0.00 0.00 0.00 3.51
2694 3085 2.387757 TGATGACATGATCCCGAGTGA 58.612 47.619 0.00 0.00 0.00 3.41
2695 3086 2.967887 TGATGACATGATCCCGAGTGAT 59.032 45.455 0.00 0.00 0.00 3.06
2696 3087 3.006217 TGATGACATGATCCCGAGTGATC 59.994 47.826 0.00 0.00 41.27 2.92
2702 3093 3.949842 TGATCCCGAGTGATCATGATC 57.050 47.619 25.91 25.91 44.65 2.92
2703 3094 2.564504 TGATCCCGAGTGATCATGATCC 59.435 50.000 28.61 20.44 44.65 3.36
2704 3095 1.342074 TCCCGAGTGATCATGATCCC 58.658 55.000 28.61 19.95 37.02 3.85
2705 3096 0.037882 CCCGAGTGATCATGATCCCG 60.038 60.000 28.61 25.75 37.02 5.14
2706 3097 0.961753 CCGAGTGATCATGATCCCGA 59.038 55.000 28.61 11.19 37.02 5.14
2707 3098 1.067985 CCGAGTGATCATGATCCCGAG 60.068 57.143 28.61 17.57 37.02 4.63
2708 3099 1.611006 CGAGTGATCATGATCCCGAGT 59.389 52.381 28.61 15.62 37.02 4.18
2709 3100 2.035193 CGAGTGATCATGATCCCGAGTT 59.965 50.000 28.61 10.77 37.02 3.01
2710 3101 3.388308 GAGTGATCATGATCCCGAGTTG 58.612 50.000 28.61 0.00 37.02 3.16
2711 3102 2.768527 AGTGATCATGATCCCGAGTTGT 59.231 45.455 28.61 1.76 37.02 3.32
2712 3103 3.198635 AGTGATCATGATCCCGAGTTGTT 59.801 43.478 28.61 1.07 37.02 2.83
2713 3104 3.941483 GTGATCATGATCCCGAGTTGTTT 59.059 43.478 28.61 0.00 37.02 2.83
2714 3105 3.940852 TGATCATGATCCCGAGTTGTTTG 59.059 43.478 28.61 0.00 37.02 2.93
2715 3106 3.417069 TCATGATCCCGAGTTGTTTGT 57.583 42.857 0.00 0.00 0.00 2.83
2716 3107 3.750371 TCATGATCCCGAGTTGTTTGTT 58.250 40.909 0.00 0.00 0.00 2.83
2717 3108 3.751175 TCATGATCCCGAGTTGTTTGTTC 59.249 43.478 0.00 0.00 0.00 3.18
2718 3109 3.201353 TGATCCCGAGTTGTTTGTTCA 57.799 42.857 0.00 0.00 0.00 3.18
2719 3110 2.875933 TGATCCCGAGTTGTTTGTTCAC 59.124 45.455 0.00 0.00 0.00 3.18
2720 3111 2.404923 TCCCGAGTTGTTTGTTCACA 57.595 45.000 0.00 0.00 0.00 3.58
2721 3112 2.011222 TCCCGAGTTGTTTGTTCACAC 58.989 47.619 0.00 0.00 0.00 3.82
2722 3113 1.267832 CCCGAGTTGTTTGTTCACACG 60.268 52.381 0.00 0.00 0.00 4.49
2723 3114 1.395608 CCGAGTTGTTTGTTCACACGT 59.604 47.619 0.00 0.00 0.00 4.49
2724 3115 2.536130 CCGAGTTGTTTGTTCACACGTC 60.536 50.000 0.00 0.00 0.00 4.34
2725 3116 2.347452 CGAGTTGTTTGTTCACACGTCT 59.653 45.455 0.00 0.00 0.00 4.18
2726 3117 3.541516 CGAGTTGTTTGTTCACACGTCTC 60.542 47.826 0.00 0.00 0.00 3.36
2727 3118 2.676342 AGTTGTTTGTTCACACGTCTCC 59.324 45.455 0.00 0.00 0.00 3.71
2728 3119 2.676342 GTTGTTTGTTCACACGTCTCCT 59.324 45.455 0.00 0.00 0.00 3.69
2729 3120 2.546778 TGTTTGTTCACACGTCTCCTC 58.453 47.619 0.00 0.00 0.00 3.71
2730 3121 1.521423 GTTTGTTCACACGTCTCCTCG 59.479 52.381 0.00 0.00 0.00 4.63
2731 3122 0.742505 TTGTTCACACGTCTCCTCGT 59.257 50.000 0.00 0.00 45.10 4.18
2737 3128 3.054503 ACGTCTCCTCGTGGTCGG 61.055 66.667 16.91 5.85 42.56 4.79
2738 3129 2.745100 CGTCTCCTCGTGGTCGGA 60.745 66.667 2.99 0.00 37.69 4.55
2739 3130 2.876219 GTCTCCTCGTGGTCGGAC 59.124 66.667 2.99 0.00 37.69 4.79
2740 3131 1.674980 GTCTCCTCGTGGTCGGACT 60.675 63.158 8.23 0.00 37.69 3.85
2741 3132 1.376942 TCTCCTCGTGGTCGGACTC 60.377 63.158 8.23 0.00 37.69 3.36
2742 3133 1.377463 CTCCTCGTGGTCGGACTCT 60.377 63.158 8.23 0.00 37.69 3.24
2743 3134 0.961358 CTCCTCGTGGTCGGACTCTT 60.961 60.000 8.23 0.00 37.69 2.85
2744 3135 0.959372 TCCTCGTGGTCGGACTCTTC 60.959 60.000 8.23 0.00 37.69 2.87
2745 3136 0.961358 CCTCGTGGTCGGACTCTTCT 60.961 60.000 8.23 0.00 37.69 2.85
2746 3137 0.448593 CTCGTGGTCGGACTCTTCTC 59.551 60.000 8.23 0.00 37.69 2.87
2747 3138 0.959372 TCGTGGTCGGACTCTTCTCC 60.959 60.000 8.23 0.00 37.69 3.71
2748 3139 0.961358 CGTGGTCGGACTCTTCTCCT 60.961 60.000 8.23 0.00 0.00 3.69
2749 3140 0.812549 GTGGTCGGACTCTTCTCCTC 59.187 60.000 8.23 0.00 0.00 3.71
2750 3141 0.323542 TGGTCGGACTCTTCTCCTCC 60.324 60.000 8.23 0.00 0.00 4.30
2751 3142 0.033894 GGTCGGACTCTTCTCCTCCT 60.034 60.000 8.23 0.00 0.00 3.69
2752 3143 1.385528 GTCGGACTCTTCTCCTCCTC 58.614 60.000 0.00 0.00 0.00 3.71
2753 3144 1.064979 GTCGGACTCTTCTCCTCCTCT 60.065 57.143 0.00 0.00 0.00 3.69
2754 3145 2.171027 GTCGGACTCTTCTCCTCCTCTA 59.829 54.545 0.00 0.00 0.00 2.43
2755 3146 3.050089 TCGGACTCTTCTCCTCCTCTAT 58.950 50.000 0.00 0.00 0.00 1.98
2756 3147 3.146066 CGGACTCTTCTCCTCCTCTATG 58.854 54.545 0.00 0.00 0.00 2.23
2757 3148 3.434453 CGGACTCTTCTCCTCCTCTATGT 60.434 52.174 0.00 0.00 0.00 2.29
2758 3149 4.542697 GGACTCTTCTCCTCCTCTATGTT 58.457 47.826 0.00 0.00 0.00 2.71
2759 3150 4.340950 GGACTCTTCTCCTCCTCTATGTTG 59.659 50.000 0.00 0.00 0.00 3.33
2760 3151 5.197451 GACTCTTCTCCTCCTCTATGTTGA 58.803 45.833 0.00 0.00 0.00 3.18
2761 3152 5.776358 ACTCTTCTCCTCCTCTATGTTGAT 58.224 41.667 0.00 0.00 0.00 2.57
2762 3153 5.598005 ACTCTTCTCCTCCTCTATGTTGATG 59.402 44.000 0.00 0.00 0.00 3.07
2763 3154 5.770919 TCTTCTCCTCCTCTATGTTGATGA 58.229 41.667 0.00 0.00 0.00 2.92
2764 3155 5.596361 TCTTCTCCTCCTCTATGTTGATGAC 59.404 44.000 0.00 0.00 0.00 3.06
2765 3156 4.871822 TCTCCTCCTCTATGTTGATGACA 58.128 43.478 0.00 0.00 43.71 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.301551 AGACACTGGATTGTTTGCATTAACA 59.698 36.000 0.00 0.00 36.30 2.41
2 3 5.772521 AGACACTGGATTGTTTGCATTAAC 58.227 37.500 0.00 0.00 0.00 2.01
4 5 5.278907 CCAAGACACTGGATTGTTTGCATTA 60.279 40.000 0.00 0.00 38.96 1.90
5 6 4.501915 CCAAGACACTGGATTGTTTGCATT 60.502 41.667 0.00 0.00 38.96 3.56
6 7 3.006110 CCAAGACACTGGATTGTTTGCAT 59.994 43.478 0.00 0.00 38.96 3.96
7 8 2.361757 CCAAGACACTGGATTGTTTGCA 59.638 45.455 0.00 0.00 38.96 4.08
8 9 2.288395 CCCAAGACACTGGATTGTTTGC 60.288 50.000 0.00 0.00 38.96 3.68
9 10 2.958355 ACCCAAGACACTGGATTGTTTG 59.042 45.455 0.00 0.00 38.96 2.93
10 11 2.958355 CACCCAAGACACTGGATTGTTT 59.042 45.455 0.00 0.00 38.96 2.83
11 12 2.586425 CACCCAAGACACTGGATTGTT 58.414 47.619 0.00 0.00 38.96 2.83
12 13 1.202927 CCACCCAAGACACTGGATTGT 60.203 52.381 0.00 0.00 38.96 2.71
13 14 1.073763 TCCACCCAAGACACTGGATTG 59.926 52.381 0.00 0.00 38.96 2.67
14 15 1.352352 CTCCACCCAAGACACTGGATT 59.648 52.381 0.00 0.00 38.96 3.01
15 16 0.987294 CTCCACCCAAGACACTGGAT 59.013 55.000 0.00 0.00 38.96 3.41
16 17 0.105194 TCTCCACCCAAGACACTGGA 60.105 55.000 0.00 0.00 38.96 3.86
17 18 0.035458 GTCTCCACCCAAGACACTGG 59.965 60.000 0.00 0.00 42.23 4.00
18 19 0.758734 TGTCTCCACCCAAGACACTG 59.241 55.000 1.98 0.00 46.15 3.66
19 20 1.051812 CTGTCTCCACCCAAGACACT 58.948 55.000 1.98 0.00 46.15 3.55
20 21 0.035458 CCTGTCTCCACCCAAGACAC 59.965 60.000 1.98 0.00 46.15 3.67
22 23 1.056660 TTCCTGTCTCCACCCAAGAC 58.943 55.000 0.00 0.00 42.83 3.01
23 24 1.630369 CATTCCTGTCTCCACCCAAGA 59.370 52.381 0.00 0.00 0.00 3.02
24 25 1.630369 TCATTCCTGTCTCCACCCAAG 59.370 52.381 0.00 0.00 0.00 3.61
25 26 1.741028 TCATTCCTGTCTCCACCCAA 58.259 50.000 0.00 0.00 0.00 4.12
26 27 1.561076 CATCATTCCTGTCTCCACCCA 59.439 52.381 0.00 0.00 0.00 4.51
27 28 1.839994 TCATCATTCCTGTCTCCACCC 59.160 52.381 0.00 0.00 0.00 4.61
28 29 2.744494 GCTCATCATTCCTGTCTCCACC 60.744 54.545 0.00 0.00 0.00 4.61
29 30 2.170187 AGCTCATCATTCCTGTCTCCAC 59.830 50.000 0.00 0.00 0.00 4.02
30 31 2.433604 GAGCTCATCATTCCTGTCTCCA 59.566 50.000 9.40 0.00 0.00 3.86
31 32 2.433604 TGAGCTCATCATTCCTGTCTCC 59.566 50.000 13.74 0.00 31.12 3.71
32 33 3.815856 TGAGCTCATCATTCCTGTCTC 57.184 47.619 13.74 0.00 31.12 3.36
33 34 3.773667 TCTTGAGCTCATCATTCCTGTCT 59.226 43.478 19.04 0.00 37.89 3.41
34 35 4.134379 TCTTGAGCTCATCATTCCTGTC 57.866 45.455 19.04 0.00 37.89 3.51
35 36 4.706035 GATCTTGAGCTCATCATTCCTGT 58.294 43.478 19.04 0.00 37.89 4.00
36 37 3.741856 CGATCTTGAGCTCATCATTCCTG 59.258 47.826 19.04 0.00 37.89 3.86
37 38 3.244146 CCGATCTTGAGCTCATCATTCCT 60.244 47.826 19.04 0.00 37.89 3.36
38 39 3.065655 CCGATCTTGAGCTCATCATTCC 58.934 50.000 19.04 4.42 37.89 3.01
39 40 3.065655 CCCGATCTTGAGCTCATCATTC 58.934 50.000 19.04 11.22 37.89 2.67
40 41 2.702478 TCCCGATCTTGAGCTCATCATT 59.298 45.455 19.04 2.81 37.89 2.57
41 42 2.299582 CTCCCGATCTTGAGCTCATCAT 59.700 50.000 19.04 12.38 37.89 2.45
42 43 1.685517 CTCCCGATCTTGAGCTCATCA 59.314 52.381 19.04 7.46 35.62 3.07
43 44 1.000731 CCTCCCGATCTTGAGCTCATC 59.999 57.143 19.04 11.53 0.00 2.92
44 45 1.047002 CCTCCCGATCTTGAGCTCAT 58.953 55.000 19.04 1.77 0.00 2.90
45 46 1.680522 GCCTCCCGATCTTGAGCTCA 61.681 60.000 13.74 13.74 0.00 4.26
46 47 1.068921 GCCTCCCGATCTTGAGCTC 59.931 63.158 6.82 6.82 0.00 4.09
47 48 2.790791 CGCCTCCCGATCTTGAGCT 61.791 63.158 0.00 0.00 40.02 4.09
48 49 2.279784 CGCCTCCCGATCTTGAGC 60.280 66.667 3.48 0.00 40.02 4.26
49 50 2.419198 CCGCCTCCCGATCTTGAG 59.581 66.667 0.00 0.00 40.02 3.02
50 51 3.154473 CCCGCCTCCCGATCTTGA 61.154 66.667 0.00 0.00 40.02 3.02
51 52 4.918201 GCCCGCCTCCCGATCTTG 62.918 72.222 0.00 0.00 40.02 3.02
64 65 3.121030 CAGAGCAAGAACCGCCCG 61.121 66.667 0.00 0.00 0.00 6.13
65 66 3.435186 GCAGAGCAAGAACCGCCC 61.435 66.667 0.00 0.00 0.00 6.13
66 67 2.359230 AGCAGAGCAAGAACCGCC 60.359 61.111 0.00 0.00 0.00 6.13
67 68 2.394563 GGAGCAGAGCAAGAACCGC 61.395 63.158 0.00 0.00 0.00 5.68
68 69 1.018226 CAGGAGCAGAGCAAGAACCG 61.018 60.000 0.00 0.00 0.00 4.44
69 70 0.676151 CCAGGAGCAGAGCAAGAACC 60.676 60.000 0.00 0.00 0.00 3.62
70 71 1.304509 GCCAGGAGCAGAGCAAGAAC 61.305 60.000 0.00 0.00 42.97 3.01
71 72 1.002868 GCCAGGAGCAGAGCAAGAA 60.003 57.895 0.00 0.00 42.97 2.52
72 73 2.667418 GCCAGGAGCAGAGCAAGA 59.333 61.111 0.00 0.00 42.97 3.02
89 90 0.109086 CAGTGAGAGTGTGGGCGTAG 60.109 60.000 0.00 0.00 0.00 3.51
90 91 1.964448 CAGTGAGAGTGTGGGCGTA 59.036 57.895 0.00 0.00 0.00 4.42
91 92 2.737180 CAGTGAGAGTGTGGGCGT 59.263 61.111 0.00 0.00 0.00 5.68
92 93 2.740055 GCAGTGAGAGTGTGGGCG 60.740 66.667 0.00 0.00 0.00 6.13
93 94 2.359230 GGCAGTGAGAGTGTGGGC 60.359 66.667 0.00 0.00 0.00 5.36
94 95 0.109342 AAAGGCAGTGAGAGTGTGGG 59.891 55.000 0.00 0.00 0.00 4.61
95 96 1.071385 AGAAAGGCAGTGAGAGTGTGG 59.929 52.381 0.00 0.00 0.00 4.17
96 97 2.411904 GAGAAAGGCAGTGAGAGTGTG 58.588 52.381 0.00 0.00 0.00 3.82
97 98 1.346068 GGAGAAAGGCAGTGAGAGTGT 59.654 52.381 0.00 0.00 0.00 3.55
98 99 1.671261 CGGAGAAAGGCAGTGAGAGTG 60.671 57.143 0.00 0.00 0.00 3.51
99 100 0.605589 CGGAGAAAGGCAGTGAGAGT 59.394 55.000 0.00 0.00 0.00 3.24
100 101 0.739112 GCGGAGAAAGGCAGTGAGAG 60.739 60.000 0.00 0.00 0.00 3.20
101 102 1.293498 GCGGAGAAAGGCAGTGAGA 59.707 57.895 0.00 0.00 0.00 3.27
102 103 1.743252 GGCGGAGAAAGGCAGTGAG 60.743 63.158 0.00 0.00 0.00 3.51
103 104 2.347490 GGCGGAGAAAGGCAGTGA 59.653 61.111 0.00 0.00 0.00 3.41
104 105 2.747855 GGGCGGAGAAAGGCAGTG 60.748 66.667 0.00 0.00 35.71 3.66
105 106 3.249189 TGGGCGGAGAAAGGCAGT 61.249 61.111 0.00 0.00 35.71 4.40
106 107 2.747855 GTGGGCGGAGAAAGGCAG 60.748 66.667 0.00 0.00 35.71 4.85
107 108 4.697756 CGTGGGCGGAGAAAGGCA 62.698 66.667 0.00 0.00 35.71 4.75
110 111 4.697756 TGGCGTGGGCGGAGAAAG 62.698 66.667 0.00 0.00 41.24 2.62
111 112 4.257654 TTGGCGTGGGCGGAGAAA 62.258 61.111 0.00 0.00 41.24 2.52
112 113 4.697756 CTTGGCGTGGGCGGAGAA 62.698 66.667 0.00 0.00 41.24 2.87
118 119 3.365265 CTTGGTCTTGGCGTGGGC 61.365 66.667 0.00 0.00 38.90 5.36
119 120 1.966451 GTCTTGGTCTTGGCGTGGG 60.966 63.158 0.00 0.00 0.00 4.61
120 121 1.966451 GGTCTTGGTCTTGGCGTGG 60.966 63.158 0.00 0.00 0.00 4.94
121 122 0.606401 ATGGTCTTGGTCTTGGCGTG 60.606 55.000 0.00 0.00 0.00 5.34
122 123 0.981183 TATGGTCTTGGTCTTGGCGT 59.019 50.000 0.00 0.00 0.00 5.68
123 124 2.107950 TTATGGTCTTGGTCTTGGCG 57.892 50.000 0.00 0.00 0.00 5.69
124 125 3.381590 GGATTTATGGTCTTGGTCTTGGC 59.618 47.826 0.00 0.00 0.00 4.52
125 126 4.860022 AGGATTTATGGTCTTGGTCTTGG 58.140 43.478 0.00 0.00 0.00 3.61
126 127 7.775093 TCATAAGGATTTATGGTCTTGGTCTTG 59.225 37.037 7.27 0.00 44.09 3.02
127 128 7.872138 TCATAAGGATTTATGGTCTTGGTCTT 58.128 34.615 7.27 0.00 44.09 3.01
128 129 7.451731 TCATAAGGATTTATGGTCTTGGTCT 57.548 36.000 7.27 0.00 44.09 3.85
129 130 7.939039 TCATCATAAGGATTTATGGTCTTGGTC 59.061 37.037 7.27 0.00 44.09 4.02
130 131 7.815383 TCATCATAAGGATTTATGGTCTTGGT 58.185 34.615 7.27 0.00 44.09 3.67
131 132 8.696043 TTCATCATAAGGATTTATGGTCTTGG 57.304 34.615 7.27 0.00 44.09 3.61
134 135 9.566432 GTCTTTCATCATAAGGATTTATGGTCT 57.434 33.333 7.27 0.00 44.09 3.85
135 136 8.499162 CGTCTTTCATCATAAGGATTTATGGTC 58.501 37.037 7.27 0.00 44.09 4.02
136 137 7.041098 GCGTCTTTCATCATAAGGATTTATGGT 60.041 37.037 7.27 0.00 44.09 3.55
137 138 7.173907 AGCGTCTTTCATCATAAGGATTTATGG 59.826 37.037 7.27 0.00 44.09 2.74
138 139 8.092521 AGCGTCTTTCATCATAAGGATTTATG 57.907 34.615 1.76 1.76 44.90 1.90
139 140 8.562892 CAAGCGTCTTTCATCATAAGGATTTAT 58.437 33.333 0.00 0.00 32.57 1.40
140 141 7.467267 GCAAGCGTCTTTCATCATAAGGATTTA 60.467 37.037 0.00 0.00 32.57 1.40
141 142 6.678900 GCAAGCGTCTTTCATCATAAGGATTT 60.679 38.462 0.00 0.00 32.57 2.17
142 143 5.220931 GCAAGCGTCTTTCATCATAAGGATT 60.221 40.000 0.00 0.00 32.57 3.01
143 144 4.274459 GCAAGCGTCTTTCATCATAAGGAT 59.726 41.667 0.00 0.00 36.39 3.24
144 145 3.623060 GCAAGCGTCTTTCATCATAAGGA 59.377 43.478 0.00 0.00 0.00 3.36
145 146 3.624861 AGCAAGCGTCTTTCATCATAAGG 59.375 43.478 0.00 0.00 0.00 2.69
146 147 4.871993 AGCAAGCGTCTTTCATCATAAG 57.128 40.909 0.00 0.00 0.00 1.73
147 148 4.694982 TGAAGCAAGCGTCTTTCATCATAA 59.305 37.500 9.26 0.00 0.00 1.90
148 149 4.252878 TGAAGCAAGCGTCTTTCATCATA 58.747 39.130 9.26 0.00 0.00 2.15
149 150 3.076621 TGAAGCAAGCGTCTTTCATCAT 58.923 40.909 9.26 0.00 0.00 2.45
150 151 2.481568 CTGAAGCAAGCGTCTTTCATCA 59.518 45.455 9.26 0.00 0.00 3.07
151 152 2.727298 GCTGAAGCAAGCGTCTTTCATC 60.727 50.000 9.26 0.00 41.59 2.92
152 153 1.198637 GCTGAAGCAAGCGTCTTTCAT 59.801 47.619 9.26 0.00 41.59 2.57
153 154 0.588252 GCTGAAGCAAGCGTCTTTCA 59.412 50.000 9.26 2.55 41.59 2.69
154 155 3.374682 GCTGAAGCAAGCGTCTTTC 57.625 52.632 9.26 0.00 41.59 2.62
165 166 4.233005 GGATTTTCTTGTTCTGCTGAAGC 58.767 43.478 6.24 0.00 42.50 3.86
166 167 5.443185 TGGATTTTCTTGTTCTGCTGAAG 57.557 39.130 6.24 0.00 32.15 3.02
167 168 4.279169 CCTGGATTTTCTTGTTCTGCTGAA 59.721 41.667 1.33 1.33 0.00 3.02
168 169 3.822735 CCTGGATTTTCTTGTTCTGCTGA 59.177 43.478 0.00 0.00 0.00 4.26
169 170 3.822735 TCCTGGATTTTCTTGTTCTGCTG 59.177 43.478 0.00 0.00 0.00 4.41
170 171 4.104383 TCCTGGATTTTCTTGTTCTGCT 57.896 40.909 0.00 0.00 0.00 4.24
171 172 4.802999 CTTCCTGGATTTTCTTGTTCTGC 58.197 43.478 0.00 0.00 0.00 4.26
172 173 4.321527 GGCTTCCTGGATTTTCTTGTTCTG 60.322 45.833 0.00 0.00 0.00 3.02
173 174 3.829026 GGCTTCCTGGATTTTCTTGTTCT 59.171 43.478 0.00 0.00 0.00 3.01
174 175 3.573967 TGGCTTCCTGGATTTTCTTGTTC 59.426 43.478 0.00 0.00 0.00 3.18
175 176 3.575805 TGGCTTCCTGGATTTTCTTGTT 58.424 40.909 0.00 0.00 0.00 2.83
176 177 3.243359 TGGCTTCCTGGATTTTCTTGT 57.757 42.857 0.00 0.00 0.00 3.16
177 178 3.306294 GGTTGGCTTCCTGGATTTTCTTG 60.306 47.826 0.00 0.00 0.00 3.02
178 179 2.899900 GGTTGGCTTCCTGGATTTTCTT 59.100 45.455 0.00 0.00 0.00 2.52
179 180 2.529632 GGTTGGCTTCCTGGATTTTCT 58.470 47.619 0.00 0.00 0.00 2.52
180 181 1.202348 CGGTTGGCTTCCTGGATTTTC 59.798 52.381 0.00 0.00 0.00 2.29
181 182 1.256812 CGGTTGGCTTCCTGGATTTT 58.743 50.000 0.00 0.00 0.00 1.82
182 183 0.112412 ACGGTTGGCTTCCTGGATTT 59.888 50.000 0.00 0.00 0.00 2.17
183 184 0.609131 CACGGTTGGCTTCCTGGATT 60.609 55.000 0.00 0.00 0.00 3.01
184 185 1.002134 CACGGTTGGCTTCCTGGAT 60.002 57.895 0.00 0.00 0.00 3.41
185 186 2.429930 CACGGTTGGCTTCCTGGA 59.570 61.111 0.00 0.00 0.00 3.86
186 187 3.365265 GCACGGTTGGCTTCCTGG 61.365 66.667 0.00 0.00 0.00 4.45
187 188 2.594303 TGCACGGTTGGCTTCCTG 60.594 61.111 0.00 0.00 0.00 3.86
188 189 2.594592 GTGCACGGTTGGCTTCCT 60.595 61.111 0.00 0.00 0.00 3.36
189 190 3.670377 GGTGCACGGTTGGCTTCC 61.670 66.667 11.45 0.00 0.00 3.46
190 191 2.594592 AGGTGCACGGTTGGCTTC 60.595 61.111 11.45 0.00 0.00 3.86
191 192 2.697147 ATCAGGTGCACGGTTGGCTT 62.697 55.000 11.45 0.00 0.00 4.35
192 193 3.196207 ATCAGGTGCACGGTTGGCT 62.196 57.895 11.45 0.00 0.00 4.75
193 194 2.672996 ATCAGGTGCACGGTTGGC 60.673 61.111 11.45 0.00 0.00 4.52
194 195 0.677731 ATCATCAGGTGCACGGTTGG 60.678 55.000 11.45 0.20 0.00 3.77
195 196 1.167851 AATCATCAGGTGCACGGTTG 58.832 50.000 11.45 10.78 0.00 3.77
196 197 1.812571 GAAATCATCAGGTGCACGGTT 59.187 47.619 11.45 0.00 0.00 4.44
197 198 1.453155 GAAATCATCAGGTGCACGGT 58.547 50.000 11.45 0.00 0.00 4.83
198 199 0.734889 GGAAATCATCAGGTGCACGG 59.265 55.000 11.45 5.73 0.00 4.94
199 200 0.734889 GGGAAATCATCAGGTGCACG 59.265 55.000 11.45 0.00 0.00 5.34
200 201 1.838112 TGGGAAATCATCAGGTGCAC 58.162 50.000 8.80 8.80 0.00 4.57
201 202 2.562298 GTTTGGGAAATCATCAGGTGCA 59.438 45.455 0.00 0.00 0.00 4.57
202 203 2.827921 AGTTTGGGAAATCATCAGGTGC 59.172 45.455 0.00 0.00 0.00 5.01
203 204 4.523943 TGAAGTTTGGGAAATCATCAGGTG 59.476 41.667 0.00 0.00 0.00 4.00
204 205 4.739793 TGAAGTTTGGGAAATCATCAGGT 58.260 39.130 0.00 0.00 0.00 4.00
205 206 5.419788 TGATGAAGTTTGGGAAATCATCAGG 59.580 40.000 11.52 0.00 37.95 3.86
206 207 6.519679 TGATGAAGTTTGGGAAATCATCAG 57.480 37.500 11.52 0.00 37.95 2.90
207 208 6.247676 TCTGATGAAGTTTGGGAAATCATCA 58.752 36.000 14.04 14.04 39.74 3.07
208 209 6.600822 TCTCTGATGAAGTTTGGGAAATCATC 59.399 38.462 7.03 7.03 34.73 2.92
209 210 6.487828 TCTCTGATGAAGTTTGGGAAATCAT 58.512 36.000 0.00 0.00 0.00 2.45
210 211 5.879763 TCTCTGATGAAGTTTGGGAAATCA 58.120 37.500 0.00 0.00 0.00 2.57
211 212 6.127786 CCTTCTCTGATGAAGTTTGGGAAATC 60.128 42.308 12.59 0.00 41.17 2.17
212 213 5.713861 CCTTCTCTGATGAAGTTTGGGAAAT 59.286 40.000 12.59 0.00 41.17 2.17
213 214 5.072741 CCTTCTCTGATGAAGTTTGGGAAA 58.927 41.667 12.59 0.00 41.17 3.13
214 215 4.104738 ACCTTCTCTGATGAAGTTTGGGAA 59.895 41.667 12.59 0.00 41.17 3.97
215 216 3.652869 ACCTTCTCTGATGAAGTTTGGGA 59.347 43.478 12.59 0.00 41.17 4.37
216 217 3.755378 CACCTTCTCTGATGAAGTTTGGG 59.245 47.826 12.59 0.00 41.17 4.12
217 218 4.645535 TCACCTTCTCTGATGAAGTTTGG 58.354 43.478 12.59 0.00 41.17 3.28
218 219 5.936372 TGATCACCTTCTCTGATGAAGTTTG 59.064 40.000 0.00 10.19 41.17 2.93
219 220 6.119240 TGATCACCTTCTCTGATGAAGTTT 57.881 37.500 0.00 1.84 41.17 2.66
220 221 5.752036 TGATCACCTTCTCTGATGAAGTT 57.248 39.130 0.00 0.88 41.17 2.66
221 222 5.189342 ACATGATCACCTTCTCTGATGAAGT 59.811 40.000 0.00 0.00 41.17 3.01
222 223 5.672503 ACATGATCACCTTCTCTGATGAAG 58.327 41.667 0.00 8.83 42.10 3.02
223 224 5.396101 GGACATGATCACCTTCTCTGATGAA 60.396 44.000 0.00 0.00 0.00 2.57
224 225 4.100653 GGACATGATCACCTTCTCTGATGA 59.899 45.833 0.00 0.00 0.00 2.92
225 226 4.378774 GGACATGATCACCTTCTCTGATG 58.621 47.826 0.00 0.00 0.00 3.07
226 227 3.390639 GGGACATGATCACCTTCTCTGAT 59.609 47.826 0.00 0.00 0.00 2.90
227 228 2.768527 GGGACATGATCACCTTCTCTGA 59.231 50.000 0.00 0.00 0.00 3.27
228 229 2.502947 TGGGACATGATCACCTTCTCTG 59.497 50.000 0.00 0.00 0.00 3.35
229 230 2.837947 TGGGACATGATCACCTTCTCT 58.162 47.619 0.00 0.00 0.00 3.10
245 246 9.696572 GGAGTACTACATACATAGATAATGGGA 57.303 37.037 0.00 0.00 40.16 4.37
246 247 8.915036 GGGAGTACTACATACATAGATAATGGG 58.085 40.741 7.57 0.00 40.16 4.00
247 248 9.702253 AGGGAGTACTACATACATAGATAATGG 57.298 37.037 7.57 0.00 40.16 3.16
250 251 9.961264 CAGAGGGAGTACTACATACATAGATAA 57.039 37.037 7.57 0.00 36.09 1.75
251 252 8.047911 GCAGAGGGAGTACTACATACATAGATA 58.952 40.741 7.57 0.00 36.09 1.98
252 253 6.887545 GCAGAGGGAGTACTACATACATAGAT 59.112 42.308 7.57 0.00 36.09 1.98
253 254 6.183361 TGCAGAGGGAGTACTACATACATAGA 60.183 42.308 7.57 0.00 36.09 1.98
254 255 6.004574 TGCAGAGGGAGTACTACATACATAG 58.995 44.000 7.57 0.00 36.09 2.23
255 256 5.948842 TGCAGAGGGAGTACTACATACATA 58.051 41.667 7.57 0.00 36.09 2.29
256 257 4.804597 TGCAGAGGGAGTACTACATACAT 58.195 43.478 7.57 0.00 36.09 2.29
257 258 4.245251 TGCAGAGGGAGTACTACATACA 57.755 45.455 7.57 0.00 36.09 2.29
258 259 5.360144 TCTTTGCAGAGGGAGTACTACATAC 59.640 44.000 7.57 0.00 0.00 2.39
259 260 5.516044 TCTTTGCAGAGGGAGTACTACATA 58.484 41.667 7.57 0.00 0.00 2.29
260 261 4.353777 TCTTTGCAGAGGGAGTACTACAT 58.646 43.478 7.57 0.00 0.00 2.29
261 262 3.774734 TCTTTGCAGAGGGAGTACTACA 58.225 45.455 7.57 0.00 0.00 2.74
262 263 4.803098 TTCTTTGCAGAGGGAGTACTAC 57.197 45.455 4.15 0.00 0.00 2.73
263 264 6.439375 TGTATTTCTTTGCAGAGGGAGTACTA 59.561 38.462 4.15 0.00 0.00 1.82
264 265 4.917906 ATTTCTTTGCAGAGGGAGTACT 57.082 40.909 4.15 0.00 0.00 2.73
265 266 5.488341 TGTATTTCTTTGCAGAGGGAGTAC 58.512 41.667 4.15 5.99 0.00 2.73
266 267 5.755409 TGTATTTCTTTGCAGAGGGAGTA 57.245 39.130 4.15 0.00 0.00 2.59
267 268 4.640771 TGTATTTCTTTGCAGAGGGAGT 57.359 40.909 4.15 0.00 0.00 3.85
268 269 5.248640 TCTTGTATTTCTTTGCAGAGGGAG 58.751 41.667 4.15 0.00 0.00 4.30
269 270 5.241403 TCTTGTATTTCTTTGCAGAGGGA 57.759 39.130 4.15 0.00 0.00 4.20
270 271 4.142513 GCTCTTGTATTTCTTTGCAGAGGG 60.143 45.833 4.15 0.00 0.00 4.30
271 272 4.142513 GGCTCTTGTATTTCTTTGCAGAGG 60.143 45.833 4.15 0.00 0.00 3.69
272 273 4.699257 AGGCTCTTGTATTTCTTTGCAGAG 59.301 41.667 0.00 0.00 0.00 3.35
273 274 4.655963 AGGCTCTTGTATTTCTTTGCAGA 58.344 39.130 0.00 0.00 0.00 4.26
274 275 5.382618 AAGGCTCTTGTATTTCTTTGCAG 57.617 39.130 0.00 0.00 0.00 4.41
275 276 5.789643 AAAGGCTCTTGTATTTCTTTGCA 57.210 34.783 0.00 0.00 0.00 4.08
276 277 7.145932 TCTAAAGGCTCTTGTATTTCTTTGC 57.854 36.000 0.00 0.00 0.00 3.68
277 278 8.950210 TGATCTAAAGGCTCTTGTATTTCTTTG 58.050 33.333 0.00 0.00 0.00 2.77
278 279 9.171877 CTGATCTAAAGGCTCTTGTATTTCTTT 57.828 33.333 0.00 0.00 0.00 2.52
279 280 7.772757 CCTGATCTAAAGGCTCTTGTATTTCTT 59.227 37.037 0.00 0.00 0.00 2.52
280 281 7.278875 CCTGATCTAAAGGCTCTTGTATTTCT 58.721 38.462 0.00 0.00 0.00 2.52
281 282 6.484977 CCCTGATCTAAAGGCTCTTGTATTTC 59.515 42.308 0.00 0.00 33.07 2.17
282 283 6.158695 TCCCTGATCTAAAGGCTCTTGTATTT 59.841 38.462 0.00 0.00 33.07 1.40
283 284 5.667626 TCCCTGATCTAAAGGCTCTTGTATT 59.332 40.000 0.00 0.00 33.07 1.89
284 285 5.219739 TCCCTGATCTAAAGGCTCTTGTAT 58.780 41.667 0.00 0.00 33.07 2.29
285 286 4.620723 TCCCTGATCTAAAGGCTCTTGTA 58.379 43.478 0.00 0.00 33.07 2.41
286 287 3.454858 TCCCTGATCTAAAGGCTCTTGT 58.545 45.455 0.00 0.00 33.07 3.16
287 288 4.703379 ATCCCTGATCTAAAGGCTCTTG 57.297 45.455 0.00 0.00 33.07 3.02
288 289 7.399674 AATAATCCCTGATCTAAAGGCTCTT 57.600 36.000 0.00 0.00 33.07 2.85
289 290 7.399674 AAATAATCCCTGATCTAAAGGCTCT 57.600 36.000 0.00 0.00 33.07 4.09
290 291 9.171877 CATAAATAATCCCTGATCTAAAGGCTC 57.828 37.037 0.00 0.00 33.07 4.70
291 292 8.673251 ACATAAATAATCCCTGATCTAAAGGCT 58.327 33.333 0.00 0.00 33.07 4.58
292 293 8.870075 ACATAAATAATCCCTGATCTAAAGGC 57.130 34.615 0.00 0.00 33.07 4.35
298 299 9.927081 ACAAGAAACATAAATAATCCCTGATCT 57.073 29.630 0.00 0.00 0.00 2.75
300 301 9.136323 GGACAAGAAACATAAATAATCCCTGAT 57.864 33.333 0.00 0.00 0.00 2.90
301 302 8.112822 TGGACAAGAAACATAAATAATCCCTGA 58.887 33.333 0.00 0.00 0.00 3.86
302 303 8.292444 TGGACAAGAAACATAAATAATCCCTG 57.708 34.615 0.00 0.00 0.00 4.45
303 304 8.917088 CATGGACAAGAAACATAAATAATCCCT 58.083 33.333 0.00 0.00 0.00 4.20
304 305 7.653311 GCATGGACAAGAAACATAAATAATCCC 59.347 37.037 0.00 0.00 0.00 3.85
305 306 8.196771 TGCATGGACAAGAAACATAAATAATCC 58.803 33.333 0.00 0.00 0.00 3.01
306 307 9.754382 ATGCATGGACAAGAAACATAAATAATC 57.246 29.630 0.00 0.00 0.00 1.75
310 311 9.537192 CAATATGCATGGACAAGAAACATAAAT 57.463 29.630 10.16 0.00 0.00 1.40
311 312 8.530311 ACAATATGCATGGACAAGAAACATAAA 58.470 29.630 10.16 0.00 0.00 1.40
312 313 8.065473 ACAATATGCATGGACAAGAAACATAA 57.935 30.769 10.16 0.00 0.00 1.90
313 314 7.643569 ACAATATGCATGGACAAGAAACATA 57.356 32.000 10.16 0.00 0.00 2.29
314 315 6.534475 ACAATATGCATGGACAAGAAACAT 57.466 33.333 10.16 0.00 0.00 2.71
315 316 5.981088 ACAATATGCATGGACAAGAAACA 57.019 34.783 10.16 0.00 0.00 2.83
316 317 7.761409 TCTAACAATATGCATGGACAAGAAAC 58.239 34.615 10.16 0.00 0.00 2.78
317 318 7.936496 TCTAACAATATGCATGGACAAGAAA 57.064 32.000 10.16 0.00 0.00 2.52
318 319 7.557358 ACATCTAACAATATGCATGGACAAGAA 59.443 33.333 10.16 0.00 0.00 2.52
319 320 7.012610 CACATCTAACAATATGCATGGACAAGA 59.987 37.037 10.16 5.76 0.00 3.02
320 321 7.136772 CACATCTAACAATATGCATGGACAAG 58.863 38.462 10.16 0.05 0.00 3.16
321 322 6.602803 ACACATCTAACAATATGCATGGACAA 59.397 34.615 10.16 0.00 0.00 3.18
322 323 6.121590 ACACATCTAACAATATGCATGGACA 58.878 36.000 10.16 0.00 0.00 4.02
323 324 6.624352 ACACATCTAACAATATGCATGGAC 57.376 37.500 10.16 0.00 0.00 4.02
324 325 9.657419 CTATACACATCTAACAATATGCATGGA 57.343 33.333 10.16 0.00 0.00 3.41
325 326 9.440773 ACTATACACATCTAACAATATGCATGG 57.559 33.333 10.16 1.09 0.00 3.66
367 370 4.644685 GCAGAAAAGCCCCTTATACAATGA 59.355 41.667 0.00 0.00 0.00 2.57
418 423 5.815581 ACTGACTTTACTAATGGCCAATGA 58.184 37.500 10.96 0.00 0.00 2.57
778 1009 2.357034 GAAAGTCCCACGCGCTCA 60.357 61.111 5.73 0.00 0.00 4.26
1077 1450 3.672503 GGGATTGGGGCCACTGGT 61.673 66.667 6.53 0.00 0.00 4.00
1096 1469 3.936203 AAGAACCGGCGGCACTGA 61.936 61.111 28.71 0.00 0.00 3.41
1153 1526 2.102757 CCACTGCAGCATCATCTAGAGT 59.897 50.000 15.27 0.00 0.00 3.24
1460 1833 1.072806 AGATGGCAGAGCACTGTGAAA 59.927 47.619 12.86 0.00 45.04 2.69
1594 1967 3.236003 GACGGGGCTCAAACTCGGT 62.236 63.158 0.00 0.00 0.00 4.69
1631 2004 1.681793 CCGAGATAGGAACACGACCAT 59.318 52.381 0.00 0.00 0.00 3.55
1761 2149 2.204151 CCCCCTGAAGGAGTGGGT 60.204 66.667 0.00 0.00 39.31 4.51
1789 2179 6.268825 ACGTACTCTTCTCAGCATAAAGAA 57.731 37.500 0.00 0.00 0.00 2.52
1832 2222 2.183555 GACCGGGAGCAGTAACCG 59.816 66.667 6.32 0.00 46.79 4.44
2275 2665 2.755650 CCACAAGACGAGCTTTGTAGT 58.244 47.619 1.31 0.00 33.60 2.73
2334 2724 1.364626 GCCACAGGAGCGAATGTCTG 61.365 60.000 0.00 0.00 0.00 3.51
2548 2939 0.322816 GCTCAAACCAGGCATGAGGA 60.323 55.000 19.11 0.00 40.68 3.71
2553 2944 1.589716 GAAGCGCTCAAACCAGGCAT 61.590 55.000 12.06 0.00 0.00 4.40
2622 3013 2.676342 GGAGACGTGTGAACAAACAACT 59.324 45.455 0.00 0.00 0.00 3.16
2687 3078 0.961753 TCGGGATCATGATCACTCGG 59.038 55.000 30.30 18.02 39.06 4.63
2688 3079 1.611006 ACTCGGGATCATGATCACTCG 59.389 52.381 30.30 27.67 39.06 4.18
2689 3080 3.181471 ACAACTCGGGATCATGATCACTC 60.181 47.826 30.30 19.83 39.06 3.51
2690 3081 2.768527 ACAACTCGGGATCATGATCACT 59.231 45.455 30.30 13.49 39.06 3.41
2691 3082 3.185246 ACAACTCGGGATCATGATCAC 57.815 47.619 31.49 28.64 39.54 3.06
2692 3083 3.912496 AACAACTCGGGATCATGATCA 57.088 42.857 31.49 14.54 39.54 2.92
2693 3084 3.941483 ACAAACAACTCGGGATCATGATC 59.059 43.478 24.90 24.90 37.11 2.92
2694 3085 3.955471 ACAAACAACTCGGGATCATGAT 58.045 40.909 8.25 8.25 0.00 2.45
2695 3086 3.417069 ACAAACAACTCGGGATCATGA 57.583 42.857 0.00 0.00 0.00 3.07
2696 3087 3.501828 TGAACAAACAACTCGGGATCATG 59.498 43.478 0.00 0.00 0.00 3.07
2697 3088 3.502211 GTGAACAAACAACTCGGGATCAT 59.498 43.478 0.00 0.00 0.00 2.45
2698 3089 2.875933 GTGAACAAACAACTCGGGATCA 59.124 45.455 0.00 0.00 0.00 2.92
2699 3090 2.875933 TGTGAACAAACAACTCGGGATC 59.124 45.455 0.00 0.00 0.00 3.36
2700 3091 2.616842 GTGTGAACAAACAACTCGGGAT 59.383 45.455 0.00 0.00 0.00 3.85
2701 3092 2.011222 GTGTGAACAAACAACTCGGGA 58.989 47.619 0.00 0.00 0.00 5.14
2702 3093 1.267832 CGTGTGAACAAACAACTCGGG 60.268 52.381 0.00 0.00 0.00 5.14
2703 3094 1.395608 ACGTGTGAACAAACAACTCGG 59.604 47.619 0.00 0.00 0.00 4.63
2704 3095 2.347452 AGACGTGTGAACAAACAACTCG 59.653 45.455 0.00 0.00 0.00 4.18
2705 3096 3.242316 GGAGACGTGTGAACAAACAACTC 60.242 47.826 0.00 0.00 0.00 3.01
2706 3097 2.676342 GGAGACGTGTGAACAAACAACT 59.324 45.455 0.00 0.00 0.00 3.16
2707 3098 2.676342 AGGAGACGTGTGAACAAACAAC 59.324 45.455 0.00 0.00 0.00 3.32
2708 3099 2.933906 GAGGAGACGTGTGAACAAACAA 59.066 45.455 0.00 0.00 0.00 2.83
2709 3100 2.546778 GAGGAGACGTGTGAACAAACA 58.453 47.619 0.00 0.00 0.00 2.83
2710 3101 1.521423 CGAGGAGACGTGTGAACAAAC 59.479 52.381 0.00 0.00 0.00 2.93
2711 3102 1.135527 ACGAGGAGACGTGTGAACAAA 59.864 47.619 0.00 0.00 44.84 2.83
2712 3103 0.742505 ACGAGGAGACGTGTGAACAA 59.257 50.000 0.00 0.00 44.84 2.83
2713 3104 2.411535 ACGAGGAGACGTGTGAACA 58.588 52.632 0.00 0.00 44.84 3.18
2721 3112 2.745100 TCCGACCACGAGGAGACG 60.745 66.667 5.68 8.23 42.66 4.18
2722 3113 1.646624 GAGTCCGACCACGAGGAGAC 61.647 65.000 5.68 9.35 42.66 3.36
2723 3114 1.376942 GAGTCCGACCACGAGGAGA 60.377 63.158 5.68 0.00 42.66 3.71
2724 3115 0.961358 AAGAGTCCGACCACGAGGAG 60.961 60.000 5.68 0.00 42.66 3.69
2725 3116 0.959372 GAAGAGTCCGACCACGAGGA 60.959 60.000 5.68 0.00 42.66 3.71
2726 3117 0.961358 AGAAGAGTCCGACCACGAGG 60.961 60.000 0.00 0.00 42.66 4.63
2727 3118 0.448593 GAGAAGAGTCCGACCACGAG 59.551 60.000 0.00 0.00 42.66 4.18
2728 3119 0.959372 GGAGAAGAGTCCGACCACGA 60.959 60.000 0.00 0.00 42.66 4.35
2729 3120 0.961358 AGGAGAAGAGTCCGACCACG 60.961 60.000 0.00 0.00 42.05 4.94
2730 3121 0.812549 GAGGAGAAGAGTCCGACCAC 59.187 60.000 0.00 0.00 42.05 4.16
2731 3122 0.323542 GGAGGAGAAGAGTCCGACCA 60.324 60.000 0.00 0.00 42.05 4.02
2732 3123 0.033894 AGGAGGAGAAGAGTCCGACC 60.034 60.000 0.00 0.00 42.05 4.79
2733 3124 1.064979 AGAGGAGGAGAAGAGTCCGAC 60.065 57.143 0.00 0.00 42.05 4.79
2734 3125 1.291109 AGAGGAGGAGAAGAGTCCGA 58.709 55.000 0.00 0.00 42.05 4.55
2735 3126 3.146066 CATAGAGGAGGAGAAGAGTCCG 58.854 54.545 0.00 0.00 42.05 4.79
2736 3127 4.178956 ACATAGAGGAGGAGAAGAGTCC 57.821 50.000 0.00 0.00 36.79 3.85
2737 3128 5.197451 TCAACATAGAGGAGGAGAAGAGTC 58.803 45.833 0.00 0.00 0.00 3.36
2738 3129 5.199982 TCAACATAGAGGAGGAGAAGAGT 57.800 43.478 0.00 0.00 0.00 3.24
2739 3130 5.832595 TCATCAACATAGAGGAGGAGAAGAG 59.167 44.000 0.00 0.00 0.00 2.85
2740 3131 5.596361 GTCATCAACATAGAGGAGGAGAAGA 59.404 44.000 0.00 0.00 0.00 2.87
2741 3132 5.362143 TGTCATCAACATAGAGGAGGAGAAG 59.638 44.000 0.00 0.00 31.20 2.85
2742 3133 5.272402 TGTCATCAACATAGAGGAGGAGAA 58.728 41.667 0.00 0.00 31.20 2.87
2743 3134 4.871822 TGTCATCAACATAGAGGAGGAGA 58.128 43.478 0.00 0.00 31.20 3.71
2744 3135 5.804944 ATGTCATCAACATAGAGGAGGAG 57.195 43.478 0.00 0.00 46.95 3.69
2761 3152 3.865446 GTCACCAGTGATGATCATGTCA 58.135 45.455 14.30 3.59 42.18 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.