Multiple sequence alignment - TraesCS2A01G226400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G226400 chr2A 100.000 5428 0 0 1 5428 234292336 234286909 0.000000e+00 10024.0
1 TraesCS2A01G226400 chr2A 88.938 678 69 2 1 678 426719051 426718380 0.000000e+00 832.0
2 TraesCS2A01G226400 chr2A 97.273 110 1 1 5003 5112 234287224 234287117 9.280000e-43 185.0
3 TraesCS2A01G226400 chr2A 97.273 110 1 1 5113 5220 234287334 234287225 9.280000e-43 185.0
4 TraesCS2A01G226400 chr2A 83.051 177 26 3 1521 1694 719219327 719219502 2.020000e-34 158.0
5 TraesCS2A01G226400 chr2A 87.500 104 8 4 1384 1487 3113633 3113535 1.240000e-21 115.0
6 TraesCS2A01G226400 chr2A 90.625 64 3 3 4984 5045 234287164 234287102 1.250000e-11 82.4
7 TraesCS2A01G226400 chr2A 95.918 49 1 1 5065 5112 234287353 234287305 1.620000e-10 78.7
8 TraesCS2A01G226400 chr2D 96.634 2555 55 4 2044 4586 252144190 252141655 0.000000e+00 4213.0
9 TraesCS2A01G226400 chr2D 92.828 1241 42 20 827 2048 252145428 252144216 0.000000e+00 1755.0
10 TraesCS2A01G226400 chr2D 93.182 836 53 4 1 833 252146288 252145454 0.000000e+00 1225.0
11 TraesCS2A01G226400 chr2D 90.508 295 22 5 4823 5112 459956423 459956130 8.530000e-103 385.0
12 TraesCS2A01G226400 chr2D 82.099 324 30 7 5113 5420 459956240 459955929 9.030000e-63 252.0
13 TraesCS2A01G226400 chr2D 86.239 109 9 5 1385 1492 385384023 385383920 4.440000e-21 113.0
14 TraesCS2A01G226400 chr2D 92.063 63 2 3 5174 5235 459956258 459956198 9.690000e-13 86.1
15 TraesCS2A01G226400 chr2D 97.826 46 0 1 5066 5110 459956258 459956213 1.620000e-10 78.7
16 TraesCS2A01G226400 chr2B 92.272 1294 38 10 3324 4605 278810710 278809467 0.000000e+00 1779.0
17 TraesCS2A01G226400 chr2B 96.497 885 27 3 2044 2924 278821325 278820441 0.000000e+00 1459.0
18 TraesCS2A01G226400 chr2B 89.189 1110 52 33 882 1934 278908178 278907080 0.000000e+00 1323.0
19 TraesCS2A01G226400 chr2B 92.875 407 17 2 2933 3327 278814926 278814520 1.010000e-161 580.0
20 TraesCS2A01G226400 chr2B 94.915 118 6 0 1931 2048 278821468 278821351 9.280000e-43 185.0
21 TraesCS2A01G226400 chr5A 90.347 808 76 2 26 833 649864964 649864159 0.000000e+00 1059.0
22 TraesCS2A01G226400 chr3A 89.153 295 26 6 4823 5112 734022612 734022905 4.000000e-96 363.0
23 TraesCS2A01G226400 chr3A 84.984 313 24 16 5128 5422 389136914 389137221 4.110000e-76 296.0
24 TraesCS2A01G226400 chr3A 84.091 308 36 7 5128 5422 651603421 651603728 8.900000e-73 285.0
25 TraesCS2A01G226400 chr3A 87.685 203 14 5 4915 5112 389136813 389137009 5.470000e-55 226.0
26 TraesCS2A01G226400 chr3A 82.353 221 36 3 1533 1752 32096246 32096028 7.180000e-44 189.0
27 TraesCS2A01G226400 chr3A 88.235 153 17 1 4605 4756 383358025 383357873 1.200000e-41 182.0
28 TraesCS2A01G226400 chr3A 92.437 119 6 2 5113 5228 734022795 734022913 3.360000e-37 167.0
29 TraesCS2A01G226400 chr3A 91.358 81 7 0 4984 5064 734022857 734022937 1.600000e-20 111.0
30 TraesCS2A01G226400 chr3A 94.737 57 2 1 5173 5228 734022776 734022832 2.690000e-13 87.9
31 TraesCS2A01G226400 chr3A 97.872 47 0 1 5065 5110 734022776 734022822 4.510000e-11 80.5
32 TraesCS2A01G226400 chr3A 89.474 57 6 0 4984 5040 389136961 389137017 7.540000e-09 73.1
33 TraesCS2A01G226400 chr1D 89.243 251 11 5 4830 5064 235665048 235665298 3.180000e-77 300.0
34 TraesCS2A01G226400 chr1D 87.218 266 20 3 5171 5422 235665216 235665481 1.910000e-74 291.0
35 TraesCS2A01G226400 chr1D 84.071 113 12 4 1373 1485 229310824 229310930 2.670000e-18 104.0
36 TraesCS2A01G226400 chr1D 95.161 62 1 1 5113 5172 235665237 235665298 4.480000e-16 97.1
37 TraesCS2A01G226400 chr1D 96.078 51 1 1 5063 5112 235665216 235665266 1.250000e-11 82.4
38 TraesCS2A01G226400 chr5D 84.839 310 30 5 5120 5413 501421189 501420881 4.110000e-76 296.0
39 TraesCS2A01G226400 chr5D 93.827 81 5 0 4984 5064 501421134 501421054 7.380000e-24 122.0
40 TraesCS2A01G226400 chr5D 95.161 62 1 1 5113 5172 501421115 501421054 4.480000e-16 97.1
41 TraesCS2A01G226400 chr7B 86.383 235 26 5 1531 1761 511960062 511960294 9.030000e-63 252.0
42 TraesCS2A01G226400 chr4A 91.503 153 13 0 4607 4759 320887091 320887243 1.530000e-50 211.0
43 TraesCS2A01G226400 chr4A 90.385 156 15 0 4604 4759 320839019 320839174 7.130000e-49 206.0
44 TraesCS2A01G226400 chr4A 90.385 156 14 1 4604 4759 320919011 320919165 2.560000e-48 204.0
45 TraesCS2A01G226400 chr4A 81.092 238 34 7 4605 4834 214315591 214315825 4.320000e-41 180.0
46 TraesCS2A01G226400 chr6B 90.446 157 15 0 1537 1693 352091544 352091700 1.980000e-49 207.0
47 TraesCS2A01G226400 chr6B 89.873 158 15 1 1537 1694 350016836 350016992 9.220000e-48 202.0
48 TraesCS2A01G226400 chr1B 83.111 225 35 2 4609 4830 82760563 82760787 9.220000e-48 202.0
49 TraesCS2A01G226400 chr1B 86.607 112 15 0 1537 1648 640853007 640853118 2.050000e-24 124.0
50 TraesCS2A01G226400 chr3B 88.024 167 20 0 1527 1693 493121626 493121792 1.190000e-46 198.0
51 TraesCS2A01G226400 chr3B 89.172 157 15 2 1537 1693 519399319 519399165 1.540000e-45 195.0
52 TraesCS2A01G226400 chr3B 86.905 168 20 2 1536 1701 102978558 102978391 2.580000e-43 187.0
53 TraesCS2A01G226400 chr3B 85.981 107 9 2 1379 1484 17333661 17333762 5.750000e-20 110.0
54 TraesCS2A01G226400 chr7D 84.694 196 28 2 4605 4799 604587117 604586923 1.540000e-45 195.0
55 TraesCS2A01G226400 chr7D 81.116 233 31 10 4604 4834 170002347 170002568 2.010000e-39 174.0
56 TraesCS2A01G226400 chr7D 97.561 41 1 0 5375 5415 95937265 95937305 2.710000e-08 71.3
57 TraesCS2A01G226400 chr5B 91.034 145 12 1 4605 4748 311186757 311186613 1.540000e-45 195.0
58 TraesCS2A01G226400 chr5B 87.755 98 7 1 1377 1474 383538846 383538754 5.750000e-20 110.0
59 TraesCS2A01G226400 chrUn 83.254 209 27 7 4634 4840 102753913 102753711 9.280000e-43 185.0
60 TraesCS2A01G226400 chrUn 85.897 78 10 1 1679 1756 276118792 276118716 1.250000e-11 82.4
61 TraesCS2A01G226400 chrUn 85.897 78 10 1 1679 1756 276163947 276163871 1.250000e-11 82.4
62 TraesCS2A01G226400 chr4B 84.416 154 21 2 1541 1693 593348206 593348357 1.220000e-31 148.0
63 TraesCS2A01G226400 chr4B 86.486 74 10 0 1679 1752 40078905 40078832 1.250000e-11 82.4
64 TraesCS2A01G226400 chr7A 86.207 116 9 5 1374 1487 611964849 611964739 9.550000e-23 119.0
65 TraesCS2A01G226400 chr7A 85.981 107 9 4 1379 1484 34031206 34031307 5.750000e-20 110.0
66 TraesCS2A01G226400 chr6A 85.714 105 9 4 1384 1487 135268342 135268243 7.440000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G226400 chr2A 234286909 234292336 5427 True 10024.000000 10024 100.000000 1 5428 1 chr2A.!!$R2 5427
1 TraesCS2A01G226400 chr2A 426718380 426719051 671 True 832.000000 832 88.938000 1 678 1 chr2A.!!$R3 677
2 TraesCS2A01G226400 chr2D 252141655 252146288 4633 True 2397.666667 4213 94.214667 1 4586 3 chr2D.!!$R2 4585
3 TraesCS2A01G226400 chr2B 278907080 278908178 1098 True 1323.000000 1323 89.189000 882 1934 1 chr2B.!!$R1 1052
4 TraesCS2A01G226400 chr2B 278809467 278814926 5459 True 1179.500000 1779 92.573500 2933 4605 2 chr2B.!!$R2 1672
5 TraesCS2A01G226400 chr2B 278820441 278821468 1027 True 822.000000 1459 95.706000 1931 2924 2 chr2B.!!$R3 993
6 TraesCS2A01G226400 chr5A 649864159 649864964 805 True 1059.000000 1059 90.347000 26 833 1 chr5A.!!$R1 807

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
577 579 0.332972 TGGCAGTGAGAGAGGCTCTA 59.667 55.000 18.75 0.0 41.35 2.43 F
1112 1179 0.811616 GTTGCATTCGATCCCGCTCT 60.812 55.000 0.00 0.0 35.37 4.09 F
1892 1993 1.878522 CCGTTTCTGATCCGCCTCG 60.879 63.158 0.00 0.0 0.00 4.63 F
3146 3290 0.532417 AGAGAATGATGCCAGCGCTC 60.532 55.000 7.13 0.0 35.36 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1892 1993 1.041447 TTAGACTACCAGCGGAGGGC 61.041 60.000 1.50 0.00 44.05 5.19 R
2617 2760 0.698238 CAATTCCAGTCACCCTCCCA 59.302 55.000 0.00 0.00 0.00 4.37 R
3649 7618 1.331756 CTTTCGTGAAGCAGTGCTGTT 59.668 47.619 20.55 3.04 39.62 3.16 R
4921 8902 0.035458 GAAGGAGCCCCGTATCCATG 59.965 60.000 0.00 0.00 38.12 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 3.198417 TCAATCTGTGCAGCAGGAGATAA 59.802 43.478 14.70 6.37 45.08 1.75
84 85 3.374058 AGGCACGCATTACTGAATTGTAC 59.626 43.478 0.00 0.00 0.00 2.90
298 299 3.009033 TCCAAAGTCCTTCGTCAATCCAT 59.991 43.478 0.00 0.00 0.00 3.41
299 300 3.375299 CCAAAGTCCTTCGTCAATCCATC 59.625 47.826 0.00 0.00 0.00 3.51
321 322 6.554334 TCGTTTTATCAGTTCTTTTCTGGG 57.446 37.500 0.00 0.00 34.15 4.45
332 333 1.555075 CTTTTCTGGGGGACATCTCGA 59.445 52.381 0.00 0.00 0.00 4.04
352 353 4.098044 TCGACATTAACAAAGCCAAACCAA 59.902 37.500 0.00 0.00 0.00 3.67
363 364 3.565307 AGCCAAACCAAAGTCAGAATCA 58.435 40.909 0.00 0.00 0.00 2.57
437 438 2.447443 AGATCAACTCCGACACAGCTA 58.553 47.619 0.00 0.00 0.00 3.32
454 455 2.084546 GCTATTTTCAGGAACGGCAGT 58.915 47.619 0.00 0.00 0.00 4.40
462 463 4.265056 GAACGGCAGTGGTGGGGT 62.265 66.667 0.00 0.00 0.00 4.95
467 468 1.151908 GGCAGTGGTGGGGTTGTAA 59.848 57.895 0.00 0.00 0.00 2.41
534 535 7.043565 TCATGCGTCACATATAGCAATCATAT 58.956 34.615 0.00 0.00 43.19 1.78
536 537 6.397272 TGCGTCACATATAGCAATCATATGA 58.603 36.000 8.10 8.10 38.21 2.15
554 556 8.465273 TCATATGAATCCGAAGACTCTAGAAA 57.535 34.615 1.98 0.00 0.00 2.52
577 579 0.332972 TGGCAGTGAGAGAGGCTCTA 59.667 55.000 18.75 0.00 41.35 2.43
655 657 6.612247 ACAATTGTCGACAGAATACAACAA 57.388 33.333 19.11 0.00 36.06 2.83
747 749 8.997621 TGTAACATAGTTCATGAGTTAAGGAC 57.002 34.615 6.18 0.00 38.10 3.85
795 799 4.438608 CGCTAAGCATGCTTTAACATTGGA 60.439 41.667 35.99 15.14 37.47 3.53
820 824 2.398554 CCGTCATGTTTGGCTCGGG 61.399 63.158 0.00 0.00 35.25 5.14
846 882 9.740239 GCAATCTGATGATTTAATAAAGCTTGA 57.260 29.630 0.00 0.00 40.61 3.02
854 890 9.941664 ATGATTTAATAAAGCTTGACGAGATTG 57.058 29.630 0.00 0.00 33.47 2.67
856 892 9.427127 GATTTAATAAAGCTTGACGAGATTGTC 57.573 33.333 0.00 0.00 33.47 3.18
858 894 9.647797 TTTAATAAAGCTTGACGAGATTGTCTA 57.352 29.630 0.00 0.00 39.64 2.59
859 895 9.647797 TTAATAAAGCTTGACGAGATTGTCTAA 57.352 29.630 0.00 0.00 39.64 2.10
860 896 8.547967 AATAAAGCTTGACGAGATTGTCTAAA 57.452 30.769 0.00 0.00 39.64 1.85
1008 1072 2.100631 CCTTCGCTCGATGCCGTTT 61.101 57.895 0.00 0.00 38.78 3.60
1112 1179 0.811616 GTTGCATTCGATCCCGCTCT 60.812 55.000 0.00 0.00 35.37 4.09
1171 1238 3.159472 TGCCTTGCTTCTGATGATTTGT 58.841 40.909 0.00 0.00 0.00 2.83
1456 1536 5.818136 AGTCCCATGTCATTGATTTTACG 57.182 39.130 0.00 0.00 0.00 3.18
1466 1546 6.652900 TGTCATTGATTTTACGTGGAGATTCA 59.347 34.615 0.00 0.00 0.00 2.57
1511 1606 5.277974 CGTTTAAATGGGATCGAATGCTGAT 60.278 40.000 0.00 0.00 0.00 2.90
1581 1679 4.255301 TCGGATTTTAAGTATGGCAACGT 58.745 39.130 0.00 0.00 42.51 3.99
1682 1780 4.584327 AAGTTGCCATGTCTTAACAACC 57.416 40.909 0.00 0.00 41.12 3.77
1736 1834 4.555348 TGCTTAAAATCCGAACGTTTGT 57.445 36.364 14.38 0.00 0.00 2.83
1892 1993 1.878522 CCGTTTCTGATCCGCCTCG 60.879 63.158 0.00 0.00 0.00 4.63
2155 2286 9.836864 TCATTGCTCATCATATTAGTTTGTACT 57.163 29.630 0.00 0.00 38.44 2.73
2156 2287 9.874215 CATTGCTCATCATATTAGTTTGTACTG 57.126 33.333 0.00 0.00 35.78 2.74
2160 2291 8.562892 GCTCATCATATTAGTTTGTACTGCATT 58.437 33.333 0.00 0.00 35.78 3.56
2201 2332 5.997746 CGGGTGGATCAGTTCACATTTATAT 59.002 40.000 0.00 0.00 35.74 0.86
2372 2508 9.994432 CATCACATACAAAAATAGACTTTCCTC 57.006 33.333 0.00 0.00 0.00 3.71
2534 2677 5.048573 ACCGTCTAGAGTGTTTTCTCTCTTC 60.049 44.000 0.00 0.00 44.99 2.87
2617 2760 9.036980 AGGTTCTACTATTTTCAGTGTCTGTAT 57.963 33.333 0.00 0.00 32.61 2.29
2758 2901 6.591935 TGTAGATTCCCCAAGTAATGTCATC 58.408 40.000 0.00 0.00 0.00 2.92
2844 2987 5.718146 CATATAGGCTCAGGTCTGTATGTG 58.282 45.833 0.00 0.00 41.31 3.21
2931 3075 7.324616 CAGAAGAAAAATTCCTTTGTCGATGTC 59.675 37.037 0.00 0.00 34.33 3.06
2940 3084 2.014335 TTGTCGATGTCAGGCTGATG 57.986 50.000 21.84 11.15 0.00 3.07
3145 3289 0.814410 CAGAGAATGATGCCAGCGCT 60.814 55.000 2.64 2.64 35.36 5.92
3146 3290 0.532417 AGAGAATGATGCCAGCGCTC 60.532 55.000 7.13 0.00 35.36 5.03
3167 3311 1.609061 GCTGGTGGTGGATATGATCGG 60.609 57.143 0.00 0.00 0.00 4.18
3170 3314 1.336887 GGTGGTGGATATGATCGGTCG 60.337 57.143 0.00 0.00 0.00 4.79
3310 3463 3.306849 CCTCATGGCTCATATGGTCTCAG 60.307 52.174 2.13 0.00 0.00 3.35
3542 7511 7.809546 TGTTTTCACTATCAACCATACAACA 57.190 32.000 0.00 0.00 0.00 3.33
3622 7591 1.992557 TGAAGGTTTCTAGCCCATGGT 59.007 47.619 11.73 0.00 0.00 3.55
3649 7618 9.288576 CTGATGGAGCATTAGTGGAAAATAATA 57.711 33.333 0.00 0.00 0.00 0.98
3684 7653 0.952010 GAAAGCGGCGTGGAGGTAAA 60.952 55.000 9.37 0.00 0.00 2.01
3792 7761 7.784633 AGTGTTTTGTGGTTATTTTCAATGG 57.215 32.000 0.00 0.00 0.00 3.16
3896 7877 3.548745 AGTTACCGTTTATAGGCCCAC 57.451 47.619 0.00 0.00 0.00 4.61
4054 8035 1.336332 CCTGTGTCTTGAGACTGGTCG 60.336 57.143 12.00 0.00 44.99 4.79
4172 8153 8.311109 TCATTGTGGTATGTACATTATCGCTAT 58.689 33.333 14.77 9.74 0.00 2.97
4248 8229 7.179160 TCCAGACTGTCTTTTTCTCATCTCATA 59.821 37.037 7.77 0.00 0.00 2.15
4253 8234 9.593134 ACTGTCTTTTTCTCATCTCATATACAC 57.407 33.333 0.00 0.00 0.00 2.90
4450 8431 2.093973 CCTAGCTTCTCAACCGTGATGT 60.094 50.000 0.00 0.00 31.85 3.06
4462 8443 2.159282 ACCGTGATGTGAACTATCGTCC 60.159 50.000 0.00 0.00 0.00 4.79
4556 8537 7.182361 ACAAACATTCATATCGACTATGCAG 57.818 36.000 0.00 0.00 37.68 4.41
4605 8586 7.908193 AAATTTTAGTCGTGCTTTACAGTTG 57.092 32.000 0.00 0.00 0.00 3.16
4606 8587 6.613755 ATTTTAGTCGTGCTTTACAGTTGT 57.386 33.333 0.00 0.00 0.00 3.32
4607 8588 6.425577 TTTTAGTCGTGCTTTACAGTTGTT 57.574 33.333 0.00 0.00 0.00 2.83
4608 8589 3.944422 AGTCGTGCTTTACAGTTGTTG 57.056 42.857 0.00 0.00 0.00 3.33
4609 8590 3.527533 AGTCGTGCTTTACAGTTGTTGA 58.472 40.909 0.00 0.00 0.00 3.18
4610 8591 3.555956 AGTCGTGCTTTACAGTTGTTGAG 59.444 43.478 0.00 0.00 0.00 3.02
4611 8592 3.308866 GTCGTGCTTTACAGTTGTTGAGT 59.691 43.478 0.00 0.00 0.00 3.41
4612 8593 4.505191 GTCGTGCTTTACAGTTGTTGAGTA 59.495 41.667 0.00 0.00 0.00 2.59
4613 8594 5.176958 GTCGTGCTTTACAGTTGTTGAGTAT 59.823 40.000 0.00 0.00 0.00 2.12
4614 8595 6.364165 GTCGTGCTTTACAGTTGTTGAGTATA 59.636 38.462 0.00 0.00 0.00 1.47
4615 8596 7.063074 GTCGTGCTTTACAGTTGTTGAGTATAT 59.937 37.037 0.00 0.00 0.00 0.86
4616 8597 7.062956 TCGTGCTTTACAGTTGTTGAGTATATG 59.937 37.037 0.00 0.00 0.00 1.78
4617 8598 7.148639 CGTGCTTTACAGTTGTTGAGTATATGT 60.149 37.037 0.00 0.00 0.00 2.29
4618 8599 9.146984 GTGCTTTACAGTTGTTGAGTATATGTA 57.853 33.333 0.00 0.00 0.00 2.29
4619 8600 9.884636 TGCTTTACAGTTGTTGAGTATATGTAT 57.115 29.630 0.00 0.00 0.00 2.29
4627 8608 9.830975 AGTTGTTGAGTATATGTATTATGTGCA 57.169 29.630 0.00 0.00 0.00 4.57
4642 8623 9.950680 GTATTATGTGCATATTATGTATTGGGC 57.049 33.333 0.00 0.00 0.00 5.36
4643 8624 5.920193 ATGTGCATATTATGTATTGGGCC 57.080 39.130 0.00 0.00 0.00 5.80
4644 8625 4.085733 TGTGCATATTATGTATTGGGCCC 58.914 43.478 17.59 17.59 0.00 5.80
4645 8626 3.128589 GTGCATATTATGTATTGGGCCCG 59.871 47.826 19.37 0.00 0.00 6.13
4646 8627 2.099098 GCATATTATGTATTGGGCCCGC 59.901 50.000 19.37 5.38 0.00 6.13
4647 8628 2.500392 TATTATGTATTGGGCCCGCC 57.500 50.000 19.37 4.97 0.00 6.13
4648 8629 0.777446 ATTATGTATTGGGCCCGCCT 59.223 50.000 19.37 6.54 36.10 5.52
4649 8630 0.553819 TTATGTATTGGGCCCGCCTT 59.446 50.000 19.37 3.85 36.10 4.35
4650 8631 0.109723 TATGTATTGGGCCCGCCTTC 59.890 55.000 19.37 7.07 36.10 3.46
4651 8632 1.645402 ATGTATTGGGCCCGCCTTCT 61.645 55.000 19.37 0.00 36.10 2.85
4652 8633 0.983905 TGTATTGGGCCCGCCTTCTA 60.984 55.000 19.37 0.00 36.10 2.10
4653 8634 0.250338 GTATTGGGCCCGCCTTCTAG 60.250 60.000 19.37 0.00 36.10 2.43
4654 8635 0.693092 TATTGGGCCCGCCTTCTAGT 60.693 55.000 19.37 0.00 36.10 2.57
4655 8636 1.571773 ATTGGGCCCGCCTTCTAGTT 61.572 55.000 19.37 0.00 36.10 2.24
4656 8637 2.189784 GGGCCCGCCTTCTAGTTC 59.810 66.667 5.69 0.00 36.10 3.01
4657 8638 2.189784 GGCCCGCCTTCTAGTTCC 59.810 66.667 0.00 0.00 0.00 3.62
4658 8639 2.368011 GGCCCGCCTTCTAGTTCCT 61.368 63.158 0.00 0.00 0.00 3.36
4659 8640 1.602771 GCCCGCCTTCTAGTTCCTT 59.397 57.895 0.00 0.00 0.00 3.36
4660 8641 0.744771 GCCCGCCTTCTAGTTCCTTG 60.745 60.000 0.00 0.00 0.00 3.61
4661 8642 0.613777 CCCGCCTTCTAGTTCCTTGT 59.386 55.000 0.00 0.00 0.00 3.16
4662 8643 1.829222 CCCGCCTTCTAGTTCCTTGTA 59.171 52.381 0.00 0.00 0.00 2.41
4663 8644 2.434702 CCCGCCTTCTAGTTCCTTGTAT 59.565 50.000 0.00 0.00 0.00 2.29
4664 8645 3.640029 CCCGCCTTCTAGTTCCTTGTATA 59.360 47.826 0.00 0.00 0.00 1.47
4665 8646 4.262079 CCCGCCTTCTAGTTCCTTGTATAG 60.262 50.000 0.00 0.00 0.00 1.31
4666 8647 4.341520 CCGCCTTCTAGTTCCTTGTATAGT 59.658 45.833 0.00 0.00 0.00 2.12
4667 8648 5.163437 CCGCCTTCTAGTTCCTTGTATAGTT 60.163 44.000 0.00 0.00 0.00 2.24
4668 8649 5.749109 CGCCTTCTAGTTCCTTGTATAGTTG 59.251 44.000 0.00 0.00 0.00 3.16
4669 8650 6.405508 CGCCTTCTAGTTCCTTGTATAGTTGA 60.406 42.308 0.00 0.00 0.00 3.18
4670 8651 6.981559 GCCTTCTAGTTCCTTGTATAGTTGAG 59.018 42.308 0.00 0.00 0.00 3.02
4671 8652 7.493367 CCTTCTAGTTCCTTGTATAGTTGAGG 58.507 42.308 0.00 0.00 0.00 3.86
4672 8653 7.124448 CCTTCTAGTTCCTTGTATAGTTGAGGT 59.876 40.741 0.00 0.00 0.00 3.85
4673 8654 8.431910 TTCTAGTTCCTTGTATAGTTGAGGTT 57.568 34.615 0.00 0.00 0.00 3.50
4674 8655 8.064336 TCTAGTTCCTTGTATAGTTGAGGTTC 57.936 38.462 0.00 0.00 0.00 3.62
4675 8656 5.721232 AGTTCCTTGTATAGTTGAGGTTCG 58.279 41.667 0.00 0.00 0.00 3.95
4676 8657 5.245526 AGTTCCTTGTATAGTTGAGGTTCGT 59.754 40.000 0.00 0.00 0.00 3.85
4677 8658 6.435277 AGTTCCTTGTATAGTTGAGGTTCGTA 59.565 38.462 0.00 0.00 0.00 3.43
4678 8659 6.839124 TCCTTGTATAGTTGAGGTTCGTAA 57.161 37.500 0.00 0.00 0.00 3.18
4679 8660 6.624423 TCCTTGTATAGTTGAGGTTCGTAAC 58.376 40.000 0.00 0.00 0.00 2.50
4691 8672 4.934075 GGTTCGTAACCCATCTTTGTAC 57.066 45.455 5.71 0.00 46.12 2.90
4692 8673 4.317488 GGTTCGTAACCCATCTTTGTACA 58.683 43.478 0.00 0.00 46.12 2.90
4693 8674 4.939439 GGTTCGTAACCCATCTTTGTACAT 59.061 41.667 0.00 0.00 46.12 2.29
4694 8675 5.064325 GGTTCGTAACCCATCTTTGTACATC 59.936 44.000 0.00 0.00 46.12 3.06
4695 8676 5.408880 TCGTAACCCATCTTTGTACATCA 57.591 39.130 0.00 0.00 0.00 3.07
4696 8677 5.984725 TCGTAACCCATCTTTGTACATCAT 58.015 37.500 0.00 0.00 0.00 2.45
4697 8678 5.815222 TCGTAACCCATCTTTGTACATCATG 59.185 40.000 0.00 0.00 0.00 3.07
4698 8679 5.584649 CGTAACCCATCTTTGTACATCATGT 59.415 40.000 0.00 0.00 0.00 3.21
4699 8680 6.759356 CGTAACCCATCTTTGTACATCATGTA 59.241 38.462 0.00 0.00 0.00 2.29
4700 8681 7.441157 CGTAACCCATCTTTGTACATCATGTAT 59.559 37.037 0.00 0.00 35.05 2.29
4701 8682 9.772973 GTAACCCATCTTTGTACATCATGTATA 57.227 33.333 0.00 0.00 35.05 1.47
4702 8683 8.677148 AACCCATCTTTGTACATCATGTATAC 57.323 34.615 0.00 0.00 35.05 1.47
4703 8684 7.801104 ACCCATCTTTGTACATCATGTATACA 58.199 34.615 8.27 8.27 35.05 2.29
4704 8685 8.439971 ACCCATCTTTGTACATCATGTATACAT 58.560 33.333 12.75 12.75 35.05 2.29
4727 8708 4.306767 TGCACGAGAGCAATGCAT 57.693 50.000 8.35 0.00 44.17 3.96
4728 8709 2.092374 TGCACGAGAGCAATGCATC 58.908 52.632 8.35 4.09 44.17 3.91
4729 8710 1.011463 GCACGAGAGCAATGCATCG 60.011 57.895 24.35 24.35 42.63 3.84
4730 8711 4.919653 ACGAGAGCAATGCATCGT 57.080 50.000 25.44 25.44 44.12 3.73
4731 8712 2.377004 ACGAGAGCAATGCATCGTG 58.623 52.632 28.58 14.16 45.94 4.35
4732 8713 1.011463 CGAGAGCAATGCATCGTGC 60.011 57.895 19.92 14.31 45.29 5.34
4750 8731 8.967218 GCATCGTGCAATTTACATATTTTATGT 58.033 29.630 5.56 5.56 44.26 2.29
4752 8733 8.848948 TCGTGCAATTTACATATTTTATGTGG 57.151 30.769 9.80 0.00 33.76 4.17
4753 8734 8.462811 TCGTGCAATTTACATATTTTATGTGGT 58.537 29.630 9.80 0.00 33.76 4.16
4754 8735 9.723447 CGTGCAATTTACATATTTTATGTGGTA 57.277 29.630 9.80 0.00 33.76 3.25
4764 8745 8.836413 ACATATTTTATGTGGTATCAGTTTCCG 58.164 33.333 0.00 0.00 0.00 4.30
4765 8746 9.051679 CATATTTTATGTGGTATCAGTTTCCGA 57.948 33.333 0.00 0.00 0.00 4.55
4766 8747 7.931578 ATTTTATGTGGTATCAGTTTCCGAA 57.068 32.000 0.00 0.00 0.00 4.30
4767 8748 7.931578 TTTTATGTGGTATCAGTTTCCGAAT 57.068 32.000 0.00 0.00 0.00 3.34
4768 8749 7.931578 TTTATGTGGTATCAGTTTCCGAATT 57.068 32.000 0.00 0.00 0.00 2.17
4769 8750 7.548196 TTATGTGGTATCAGTTTCCGAATTC 57.452 36.000 0.00 0.00 0.00 2.17
4770 8751 5.160607 TGTGGTATCAGTTTCCGAATTCT 57.839 39.130 3.52 0.00 0.00 2.40
4771 8752 6.288941 TGTGGTATCAGTTTCCGAATTCTA 57.711 37.500 3.52 0.00 0.00 2.10
4772 8753 6.703319 TGTGGTATCAGTTTCCGAATTCTAA 58.297 36.000 3.52 0.00 0.00 2.10
4773 8754 7.335627 TGTGGTATCAGTTTCCGAATTCTAAT 58.664 34.615 3.52 0.00 0.00 1.73
4774 8755 7.494625 TGTGGTATCAGTTTCCGAATTCTAATC 59.505 37.037 3.52 0.00 0.00 1.75
4775 8756 6.990349 TGGTATCAGTTTCCGAATTCTAATCC 59.010 38.462 3.52 0.00 0.00 3.01
4776 8757 7.147549 TGGTATCAGTTTCCGAATTCTAATCCT 60.148 37.037 3.52 0.00 0.00 3.24
4777 8758 8.365647 GGTATCAGTTTCCGAATTCTAATCCTA 58.634 37.037 3.52 0.00 0.00 2.94
4778 8759 9.413048 GTATCAGTTTCCGAATTCTAATCCTAG 57.587 37.037 3.52 0.00 0.00 3.02
4779 8760 6.281405 TCAGTTTCCGAATTCTAATCCTAGC 58.719 40.000 3.52 0.00 0.00 3.42
4780 8761 5.467063 CAGTTTCCGAATTCTAATCCTAGCC 59.533 44.000 3.52 0.00 0.00 3.93
4781 8762 5.367060 AGTTTCCGAATTCTAATCCTAGCCT 59.633 40.000 3.52 0.00 0.00 4.58
4782 8763 5.888982 TTCCGAATTCTAATCCTAGCCTT 57.111 39.130 3.52 0.00 0.00 4.35
4783 8764 5.888982 TCCGAATTCTAATCCTAGCCTTT 57.111 39.130 3.52 0.00 0.00 3.11
4784 8765 5.855045 TCCGAATTCTAATCCTAGCCTTTC 58.145 41.667 3.52 0.00 0.00 2.62
4785 8766 4.686554 CCGAATTCTAATCCTAGCCTTTCG 59.313 45.833 3.52 0.00 34.17 3.46
4786 8767 4.686554 CGAATTCTAATCCTAGCCTTTCGG 59.313 45.833 3.52 0.00 32.63 4.30
4845 8826 4.129737 CCGCCGTCACCGTGATCT 62.130 66.667 4.13 0.00 0.00 2.75
4846 8827 2.579787 CGCCGTCACCGTGATCTC 60.580 66.667 4.13 0.00 0.00 2.75
4847 8828 2.202756 GCCGTCACCGTGATCTCC 60.203 66.667 4.13 0.00 0.00 3.71
4848 8829 2.711922 GCCGTCACCGTGATCTCCT 61.712 63.158 4.13 0.00 0.00 3.69
4849 8830 1.433879 CCGTCACCGTGATCTCCTC 59.566 63.158 4.13 0.00 0.00 3.71
4850 8831 1.433879 CGTCACCGTGATCTCCTCC 59.566 63.158 4.13 0.00 0.00 4.30
4851 8832 1.032657 CGTCACCGTGATCTCCTCCT 61.033 60.000 4.13 0.00 0.00 3.69
4852 8833 0.457851 GTCACCGTGATCTCCTCCTG 59.542 60.000 4.13 0.00 0.00 3.86
4853 8834 1.142748 CACCGTGATCTCCTCCTGC 59.857 63.158 0.00 0.00 0.00 4.85
4854 8835 2.060980 ACCGTGATCTCCTCCTGCC 61.061 63.158 0.00 0.00 0.00 4.85
4855 8836 2.801631 CCGTGATCTCCTCCTGCCC 61.802 68.421 0.00 0.00 0.00 5.36
4856 8837 2.801631 CGTGATCTCCTCCTGCCCC 61.802 68.421 0.00 0.00 0.00 5.80
4857 8838 2.444706 TGATCTCCTCCTGCCCCG 60.445 66.667 0.00 0.00 0.00 5.73
4858 8839 3.237741 GATCTCCTCCTGCCCCGG 61.238 72.222 0.00 0.00 0.00 5.73
4859 8840 3.758133 GATCTCCTCCTGCCCCGGA 62.758 68.421 0.73 0.00 0.00 5.14
4860 8841 4.779733 TCTCCTCCTGCCCCGGAC 62.780 72.222 0.73 0.00 0.00 4.79
4879 8860 4.821589 CCGCTTCGGCCTCTGACC 62.822 72.222 0.00 0.00 41.17 4.02
4880 8861 4.821589 CGCTTCGGCCTCTGACCC 62.822 72.222 0.00 0.00 37.76 4.46
4881 8862 4.475135 GCTTCGGCCTCTGACCCC 62.475 72.222 0.00 0.00 34.32 4.95
4882 8863 4.148825 CTTCGGCCTCTGACCCCG 62.149 72.222 0.00 5.20 43.21 5.73
4899 8880 4.899239 GCAGCCGCCGCTCACTAT 62.899 66.667 0.00 0.00 43.95 2.12
4900 8881 2.963854 CAGCCGCCGCTCACTATG 60.964 66.667 0.00 0.00 43.95 2.23
4901 8882 4.227134 AGCCGCCGCTCACTATGG 62.227 66.667 0.00 0.00 43.95 2.74
4907 8888 3.634072 CGCTCACTATGGCGCTGC 61.634 66.667 7.64 0.00 44.64 5.25
4926 8907 4.161295 CCTCCGCCTTCGCATGGA 62.161 66.667 0.00 0.00 34.03 3.41
4927 8908 2.109799 CTCCGCCTTCGCATGGAT 59.890 61.111 0.00 0.00 34.03 3.41
4928 8909 1.367471 CTCCGCCTTCGCATGGATA 59.633 57.895 0.00 0.00 34.03 2.59
4929 8910 0.946221 CTCCGCCTTCGCATGGATAC 60.946 60.000 0.00 0.00 34.03 2.24
4930 8911 2.310233 CCGCCTTCGCATGGATACG 61.310 63.158 0.00 0.00 34.74 3.06
4931 8912 2.310233 CGCCTTCGCATGGATACGG 61.310 63.158 0.00 0.00 34.74 4.02
4932 8913 1.961277 GCCTTCGCATGGATACGGG 60.961 63.158 0.00 0.00 34.74 5.28
4933 8914 1.301716 CCTTCGCATGGATACGGGG 60.302 63.158 0.00 0.00 42.51 5.73
4934 8915 1.961277 CTTCGCATGGATACGGGGC 60.961 63.158 0.00 0.00 42.51 5.80
4935 8916 2.383245 CTTCGCATGGATACGGGGCT 62.383 60.000 0.00 0.00 42.51 5.19
4936 8917 2.357517 CGCATGGATACGGGGCTC 60.358 66.667 0.00 0.00 42.51 4.70
4937 8918 2.032681 GCATGGATACGGGGCTCC 59.967 66.667 0.00 0.00 42.51 4.70
4938 8919 2.520536 GCATGGATACGGGGCTCCT 61.521 63.158 0.00 0.00 42.51 3.69
4939 8920 2.056906 GCATGGATACGGGGCTCCTT 62.057 60.000 0.00 0.00 42.51 3.36
4940 8921 0.035458 CATGGATACGGGGCTCCTTC 59.965 60.000 0.00 0.00 42.51 3.46
4941 8922 0.104934 ATGGATACGGGGCTCCTTCT 60.105 55.000 0.00 0.00 42.51 2.85
4942 8923 1.048724 TGGATACGGGGCTCCTTCTG 61.049 60.000 0.00 0.00 42.51 3.02
4943 8924 1.749033 GATACGGGGCTCCTTCTGG 59.251 63.158 0.00 0.00 0.00 3.86
4944 8925 1.003051 ATACGGGGCTCCTTCTGGT 59.997 57.895 0.00 0.00 34.23 4.00
4945 8926 0.620700 ATACGGGGCTCCTTCTGGTT 60.621 55.000 0.00 0.00 34.23 3.67
4946 8927 1.550130 TACGGGGCTCCTTCTGGTTG 61.550 60.000 0.00 0.00 34.23 3.77
4947 8928 2.356667 GGGGCTCCTTCTGGTTGG 59.643 66.667 0.00 0.00 34.23 3.77
4948 8929 2.356667 GGGCTCCTTCTGGTTGGG 59.643 66.667 0.00 0.00 34.23 4.12
4949 8930 2.356667 GGCTCCTTCTGGTTGGGG 59.643 66.667 0.00 0.00 34.23 4.96
4950 8931 2.361737 GCTCCTTCTGGTTGGGGC 60.362 66.667 0.00 0.00 43.10 5.80
4951 8932 3.170362 CTCCTTCTGGTTGGGGCA 58.830 61.111 0.00 0.00 34.23 5.36
4952 8933 1.303643 CTCCTTCTGGTTGGGGCAC 60.304 63.158 0.00 0.00 34.23 5.01
4953 8934 2.771328 CTCCTTCTGGTTGGGGCACC 62.771 65.000 0.00 0.00 40.98 5.01
4971 8952 1.813513 CCAGTCAGTGGGTCAACATC 58.186 55.000 0.00 0.00 43.63 3.06
4972 8953 1.611673 CCAGTCAGTGGGTCAACATCC 60.612 57.143 0.00 0.00 43.63 3.51
4973 8954 0.321671 AGTCAGTGGGTCAACATCCG 59.678 55.000 0.00 0.00 0.00 4.18
4974 8955 1.003839 TCAGTGGGTCAACATCCGC 60.004 57.895 0.00 0.00 0.00 5.54
4975 8956 2.040544 CAGTGGGTCAACATCCGCC 61.041 63.158 0.00 0.00 34.29 6.13
4976 8957 2.750237 GTGGGTCAACATCCGCCC 60.750 66.667 0.00 0.00 41.42 6.13
4978 8959 2.275418 GGGTCAACATCCGCCCAT 59.725 61.111 0.00 0.00 40.76 4.00
4979 8960 2.120909 GGGTCAACATCCGCCCATG 61.121 63.158 0.00 0.00 40.76 3.66
4980 8961 2.120909 GGTCAACATCCGCCCATGG 61.121 63.158 4.14 4.14 0.00 3.66
4981 8962 1.077787 GTCAACATCCGCCCATGGA 60.078 57.895 15.22 0.00 43.58 3.41
4982 8963 1.097547 GTCAACATCCGCCCATGGAG 61.098 60.000 15.22 6.77 42.45 3.86
4983 8964 2.124151 AACATCCGCCCATGGAGC 60.124 61.111 15.22 14.17 42.45 4.70
4984 8965 2.982643 AACATCCGCCCATGGAGCA 61.983 57.895 15.22 0.34 42.45 4.26
4985 8966 2.593725 CATCCGCCCATGGAGCAG 60.594 66.667 15.22 7.71 42.45 4.24
4986 8967 4.575973 ATCCGCCCATGGAGCAGC 62.576 66.667 15.22 7.01 42.45 5.25
5003 8984 4.974721 CCAACCGGCCAGCCTTGT 62.975 66.667 0.00 0.88 0.00 3.16
5004 8985 2.912025 CAACCGGCCAGCCTTGTT 60.912 61.111 0.00 7.31 31.76 2.83
5005 8986 2.123468 AACCGGCCAGCCTTGTTT 60.123 55.556 0.00 0.00 0.00 2.83
5006 8987 1.760480 AACCGGCCAGCCTTGTTTT 60.760 52.632 0.00 0.00 0.00 2.43
5007 8988 2.026945 AACCGGCCAGCCTTGTTTTG 62.027 55.000 0.00 0.00 0.00 2.44
5008 8989 2.356194 CGGCCAGCCTTGTTTTGC 60.356 61.111 2.24 0.00 0.00 3.68
5009 8990 2.031012 GGCCAGCCTTGTTTTGCC 59.969 61.111 0.00 0.00 0.00 4.52
5010 8991 2.510551 GGCCAGCCTTGTTTTGCCT 61.511 57.895 0.00 0.00 35.99 4.75
5011 8992 1.005748 GCCAGCCTTGTTTTGCCTC 60.006 57.895 0.00 0.00 0.00 4.70
5012 8993 1.286880 CCAGCCTTGTTTTGCCTCG 59.713 57.895 0.00 0.00 0.00 4.63
5013 8994 1.372128 CAGCCTTGTTTTGCCTCGC 60.372 57.895 0.00 0.00 0.00 5.03
5014 8995 1.529244 AGCCTTGTTTTGCCTCGCT 60.529 52.632 0.00 0.00 0.00 4.93
5015 8996 1.372128 GCCTTGTTTTGCCTCGCTG 60.372 57.895 0.00 0.00 0.00 5.18
5016 8997 1.372128 CCTTGTTTTGCCTCGCTGC 60.372 57.895 0.00 0.00 0.00 5.25
5017 8998 1.372128 CTTGTTTTGCCTCGCTGCC 60.372 57.895 0.00 0.00 0.00 4.85
5018 8999 2.753931 CTTGTTTTGCCTCGCTGCCC 62.754 60.000 0.00 0.00 0.00 5.36
5019 9000 2.985847 GTTTTGCCTCGCTGCCCT 60.986 61.111 0.00 0.00 0.00 5.19
5020 9001 2.203480 TTTTGCCTCGCTGCCCTT 60.203 55.556 0.00 0.00 0.00 3.95
5021 9002 2.563798 TTTTGCCTCGCTGCCCTTG 61.564 57.895 0.00 0.00 0.00 3.61
5034 9015 3.271250 CCCTTGCAAGGCTATGTGT 57.729 52.632 35.85 0.00 45.10 3.72
5035 9016 2.418368 CCCTTGCAAGGCTATGTGTA 57.582 50.000 35.85 0.00 45.10 2.90
5036 9017 2.017049 CCCTTGCAAGGCTATGTGTAC 58.983 52.381 35.85 0.00 45.10 2.90
5037 9018 1.665679 CCTTGCAAGGCTATGTGTACG 59.334 52.381 31.70 4.57 39.76 3.67
5038 9019 1.665679 CTTGCAAGGCTATGTGTACGG 59.334 52.381 19.14 0.00 0.00 4.02
5039 9020 0.742990 TGCAAGGCTATGTGTACGGC 60.743 55.000 0.00 0.00 0.00 5.68
5040 9021 1.436983 GCAAGGCTATGTGTACGGCC 61.437 60.000 0.00 0.00 44.38 6.13
5041 9022 0.107897 CAAGGCTATGTGTACGGCCA 60.108 55.000 2.24 0.50 46.23 5.36
5042 9023 0.837272 AAGGCTATGTGTACGGCCAT 59.163 50.000 2.24 0.00 46.23 4.40
5043 9024 0.106708 AGGCTATGTGTACGGCCATG 59.893 55.000 2.24 0.00 46.23 3.66
5044 9025 1.507141 GGCTATGTGTACGGCCATGC 61.507 60.000 2.24 0.00 43.59 4.06
5045 9026 1.831389 GCTATGTGTACGGCCATGCG 61.831 60.000 2.24 0.00 0.00 4.73
5046 9027 0.529773 CTATGTGTACGGCCATGCGT 60.530 55.000 2.24 3.86 0.00 5.24
5047 9028 0.745468 TATGTGTACGGCCATGCGTA 59.255 50.000 2.24 1.99 0.00 4.42
5048 9029 0.808453 ATGTGTACGGCCATGCGTAC 60.808 55.000 21.80 21.80 38.22 3.67
5049 9030 2.202636 TGTACGGCCATGCGTACG 60.203 61.111 22.51 11.84 39.43 3.67
5050 9031 2.958016 GTACGGCCATGCGTACGG 60.958 66.667 18.39 0.63 32.64 4.02
5070 9051 2.998480 CCATGCAAGGCCAGCCAA 60.998 61.111 16.44 0.57 38.92 4.52
5071 9052 2.263540 CATGCAAGGCCAGCCAAC 59.736 61.111 16.44 0.00 38.92 3.77
5072 9053 3.376078 ATGCAAGGCCAGCCAACG 61.376 61.111 16.44 0.00 38.92 4.10
5084 9065 2.912025 CCAACGGGCAGCCTTGTT 60.912 61.111 12.43 13.76 0.00 2.83
5085 9066 2.498056 CCAACGGGCAGCCTTGTTT 61.498 57.895 12.43 0.00 0.00 2.83
5086 9067 1.441311 CAACGGGCAGCCTTGTTTT 59.559 52.632 12.43 0.00 0.00 2.43
5087 9068 0.875474 CAACGGGCAGCCTTGTTTTG 60.875 55.000 12.43 3.23 0.00 2.44
5088 9069 2.356194 CGGGCAGCCTTGTTTTGC 60.356 61.111 12.43 0.00 37.11 3.68
5091 9072 4.661461 GCAGCCTTGTTTTGCCTC 57.339 55.556 0.00 0.00 31.79 4.70
5092 9073 1.372128 GCAGCCTTGTTTTGCCTCG 60.372 57.895 0.00 0.00 31.79 4.63
5093 9074 1.372128 CAGCCTTGTTTTGCCTCGC 60.372 57.895 0.00 0.00 0.00 5.03
5094 9075 1.529244 AGCCTTGTTTTGCCTCGCT 60.529 52.632 0.00 0.00 0.00 4.93
5095 9076 1.372128 GCCTTGTTTTGCCTCGCTG 60.372 57.895 0.00 0.00 0.00 5.18
5096 9077 1.372128 CCTTGTTTTGCCTCGCTGC 60.372 57.895 0.00 0.00 0.00 5.25
5097 9078 1.372128 CTTGTTTTGCCTCGCTGCC 60.372 57.895 0.00 0.00 0.00 4.85
5098 9079 2.753931 CTTGTTTTGCCTCGCTGCCC 62.754 60.000 0.00 0.00 0.00 5.36
5099 9080 2.985847 GTTTTGCCTCGCTGCCCT 60.986 61.111 0.00 0.00 0.00 5.19
5100 9081 2.203480 TTTTGCCTCGCTGCCCTT 60.203 55.556 0.00 0.00 0.00 3.95
5101 9082 2.563798 TTTTGCCTCGCTGCCCTTG 61.564 57.895 0.00 0.00 0.00 3.61
5114 9095 3.288099 CCCTTGCAAGGCTATGGTT 57.712 52.632 35.85 0.00 45.10 3.67
5115 9096 1.560505 CCCTTGCAAGGCTATGGTTT 58.439 50.000 35.85 0.00 45.10 3.27
5116 9097 1.901833 CCCTTGCAAGGCTATGGTTTT 59.098 47.619 35.85 0.00 45.10 2.43
5117 9098 2.354003 CCCTTGCAAGGCTATGGTTTTG 60.354 50.000 35.85 16.80 45.10 2.44
5118 9099 2.340337 CTTGCAAGGCTATGGTTTTGC 58.660 47.619 19.14 11.01 44.56 3.68
5119 9100 0.607620 TGCAAGGCTATGGTTTTGCC 59.392 50.000 13.91 0.00 43.89 4.52
5123 9104 1.433471 GGCTATGGTTTTGCCTCGC 59.567 57.895 0.00 0.00 43.05 5.03
5124 9105 1.032114 GGCTATGGTTTTGCCTCGCT 61.032 55.000 0.00 0.00 43.05 4.93
5125 9106 0.099436 GCTATGGTTTTGCCTCGCTG 59.901 55.000 0.00 0.00 38.35 5.18
5126 9107 0.099436 CTATGGTTTTGCCTCGCTGC 59.901 55.000 0.00 0.00 38.35 5.25
5127 9108 1.312371 TATGGTTTTGCCTCGCTGCC 61.312 55.000 0.00 0.00 38.35 4.85
5128 9109 4.056125 GGTTTTGCCTCGCTGCCC 62.056 66.667 0.00 0.00 0.00 5.36
5129 9110 2.985847 GTTTTGCCTCGCTGCCCT 60.986 61.111 0.00 0.00 0.00 5.19
5130 9111 2.203480 TTTTGCCTCGCTGCCCTT 60.203 55.556 0.00 0.00 0.00 3.95
5131 9112 2.563798 TTTTGCCTCGCTGCCCTTG 61.564 57.895 0.00 0.00 0.00 3.61
5145 9126 1.299541 CCCTTGCAAGGCTATGTACG 58.700 55.000 35.85 18.19 45.10 3.67
5146 9127 1.299541 CCTTGCAAGGCTATGTACGG 58.700 55.000 31.70 6.09 39.76 4.02
5147 9128 0.657840 CTTGCAAGGCTATGTACGGC 59.342 55.000 19.14 0.00 0.00 5.68
5152 9133 3.655481 GGCTATGTACGGCCATGC 58.345 61.111 16.14 0.00 46.84 4.06
5153 9134 2.317609 GGCTATGTACGGCCATGCG 61.318 63.158 16.14 0.00 46.84 4.73
5154 9135 1.594293 GCTATGTACGGCCATGCGT 60.594 57.895 2.24 0.00 0.00 5.24
5155 9136 0.319211 GCTATGTACGGCCATGCGTA 60.319 55.000 2.24 0.00 0.00 4.42
5156 9137 1.415374 CTATGTACGGCCATGCGTAC 58.585 55.000 21.80 21.80 38.22 3.67
5157 9138 0.318022 TATGTACGGCCATGCGTACG 60.318 55.000 22.51 11.84 39.43 3.67
5158 9139 2.958016 GTACGGCCATGCGTACGG 60.958 66.667 18.39 0.63 32.64 4.02
5178 9159 2.998480 CCATGCAAGGCCAGCCAA 60.998 61.111 16.44 0.57 38.92 4.52
5179 9160 2.263540 CATGCAAGGCCAGCCAAC 59.736 61.111 16.44 0.00 38.92 3.77
5180 9161 3.376078 ATGCAAGGCCAGCCAACG 61.376 61.111 16.44 0.00 38.92 4.10
5192 9173 2.912025 CCAACGGGCAGCCTTGTT 60.912 61.111 12.43 13.76 0.00 2.83
5193 9174 2.498056 CCAACGGGCAGCCTTGTTT 61.498 57.895 12.43 0.00 0.00 2.83
5194 9175 1.441311 CAACGGGCAGCCTTGTTTT 59.559 52.632 12.43 0.00 0.00 2.43
5195 9176 0.875474 CAACGGGCAGCCTTGTTTTG 60.875 55.000 12.43 3.23 0.00 2.44
5196 9177 2.356194 CGGGCAGCCTTGTTTTGC 60.356 61.111 12.43 0.00 37.11 3.68
5199 9180 4.661461 GCAGCCTTGTTTTGCCTC 57.339 55.556 0.00 0.00 31.79 4.70
5200 9181 1.372128 GCAGCCTTGTTTTGCCTCG 60.372 57.895 0.00 0.00 31.79 4.63
5201 9182 1.372128 CAGCCTTGTTTTGCCTCGC 60.372 57.895 0.00 0.00 0.00 5.03
5202 9183 1.529244 AGCCTTGTTTTGCCTCGCT 60.529 52.632 0.00 0.00 0.00 4.93
5203 9184 1.372128 GCCTTGTTTTGCCTCGCTG 60.372 57.895 0.00 0.00 0.00 5.18
5204 9185 1.372128 CCTTGTTTTGCCTCGCTGC 60.372 57.895 0.00 0.00 0.00 5.25
5205 9186 1.372128 CTTGTTTTGCCTCGCTGCC 60.372 57.895 0.00 0.00 0.00 4.85
5206 9187 2.753931 CTTGTTTTGCCTCGCTGCCC 62.754 60.000 0.00 0.00 0.00 5.36
5207 9188 2.985847 GTTTTGCCTCGCTGCCCT 60.986 61.111 0.00 0.00 0.00 5.19
5208 9189 2.203480 TTTTGCCTCGCTGCCCTT 60.203 55.556 0.00 0.00 0.00 3.95
5209 9190 2.563798 TTTTGCCTCGCTGCCCTTG 61.564 57.895 0.00 0.00 0.00 3.61
5227 9208 3.244105 CATGGCTATGCGTACGGC 58.756 61.111 18.39 11.51 43.96 5.68
5260 9241 2.886610 TCGACCGCGATGCCTTTA 59.113 55.556 8.23 0.00 42.51 1.85
5261 9242 1.226859 TCGACCGCGATGCCTTTAG 60.227 57.895 8.23 0.00 42.51 1.85
5262 9243 2.237751 CGACCGCGATGCCTTTAGG 61.238 63.158 8.23 0.00 40.82 2.69
5288 9269 4.873129 CCGATCCACTCGCCCGTG 62.873 72.222 0.00 0.00 46.25 4.94
5308 9289 2.046796 TGCCAACCGCATCGCTAA 60.047 55.556 0.00 0.00 44.64 3.09
5309 9290 2.395360 TGCCAACCGCATCGCTAAC 61.395 57.895 0.00 0.00 44.64 2.34
5310 9291 2.106683 GCCAACCGCATCGCTAACT 61.107 57.895 0.00 0.00 37.47 2.24
5311 9292 0.808453 GCCAACCGCATCGCTAACTA 60.808 55.000 0.00 0.00 37.47 2.24
5312 9293 0.928229 CCAACCGCATCGCTAACTAC 59.072 55.000 0.00 0.00 0.00 2.73
5313 9294 1.635844 CAACCGCATCGCTAACTACA 58.364 50.000 0.00 0.00 0.00 2.74
5314 9295 2.201732 CAACCGCATCGCTAACTACAT 58.798 47.619 0.00 0.00 0.00 2.29
5315 9296 2.596904 ACCGCATCGCTAACTACATT 57.403 45.000 0.00 0.00 0.00 2.71
5316 9297 2.201732 ACCGCATCGCTAACTACATTG 58.798 47.619 0.00 0.00 0.00 2.82
5317 9298 1.070577 CCGCATCGCTAACTACATTGC 60.071 52.381 0.00 0.00 0.00 3.56
5318 9299 1.860950 CGCATCGCTAACTACATTGCT 59.139 47.619 0.00 0.00 0.00 3.91
5319 9300 2.347939 CGCATCGCTAACTACATTGCTG 60.348 50.000 0.00 0.00 0.00 4.41
5320 9301 2.600792 GCATCGCTAACTACATTGCTGC 60.601 50.000 0.00 0.00 0.00 5.25
5321 9302 2.672961 TCGCTAACTACATTGCTGCT 57.327 45.000 0.00 0.00 0.00 4.24
5322 9303 2.270923 TCGCTAACTACATTGCTGCTG 58.729 47.619 0.00 0.00 0.00 4.41
5323 9304 1.267732 CGCTAACTACATTGCTGCTGC 60.268 52.381 8.89 8.89 40.20 5.25
5324 9305 1.064654 GCTAACTACATTGCTGCTGCC 59.935 52.381 13.47 0.00 38.71 4.85
5325 9306 1.328680 CTAACTACATTGCTGCTGCCG 59.671 52.381 13.47 4.28 38.71 5.69
5326 9307 1.926511 AACTACATTGCTGCTGCCGC 61.927 55.000 13.47 9.23 38.71 6.53
5327 9308 3.117175 CTACATTGCTGCTGCCGCC 62.117 63.158 13.49 0.00 38.71 6.13
5393 9374 4.070552 GTCCGCCTTCGCCTCTGT 62.071 66.667 0.00 0.00 0.00 3.41
5394 9375 3.311110 TCCGCCTTCGCCTCTGTT 61.311 61.111 0.00 0.00 0.00 3.16
5395 9376 3.121030 CCGCCTTCGCCTCTGTTG 61.121 66.667 0.00 0.00 0.00 3.33
5396 9377 2.357517 CGCCTTCGCCTCTGTTGT 60.358 61.111 0.00 0.00 0.00 3.32
5397 9378 2.383527 CGCCTTCGCCTCTGTTGTC 61.384 63.158 0.00 0.00 0.00 3.18
5398 9379 2.035442 GCCTTCGCCTCTGTTGTCC 61.035 63.158 0.00 0.00 0.00 4.02
5399 9380 1.376037 CCTTCGCCTCTGTTGTCCC 60.376 63.158 0.00 0.00 0.00 4.46
5400 9381 1.738099 CTTCGCCTCTGTTGTCCCG 60.738 63.158 0.00 0.00 0.00 5.14
5401 9382 3.876589 TTCGCCTCTGTTGTCCCGC 62.877 63.158 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 0.391661 CAGTAATGCGTGCCTCCAGT 60.392 55.000 0.00 0.00 0.00 4.00
84 85 5.182950 AGAGATCATACACTTCTAGCCATCG 59.817 44.000 0.00 0.00 0.00 3.84
288 289 5.718649 ACTGATAAAACGATGGATTGACG 57.281 39.130 0.00 0.00 0.00 4.35
298 299 5.472137 CCCCAGAAAAGAACTGATAAAACGA 59.528 40.000 0.00 0.00 37.54 3.85
299 300 5.335661 CCCCCAGAAAAGAACTGATAAAACG 60.336 44.000 0.00 0.00 37.54 3.60
321 322 4.201822 GCTTTGTTAATGTCGAGATGTCCC 60.202 45.833 0.00 0.00 0.00 4.46
332 333 5.739959 ACTTTGGTTTGGCTTTGTTAATGT 58.260 33.333 0.00 0.00 0.00 2.71
352 353 4.037446 GCTATCGAGGAGTGATTCTGACTT 59.963 45.833 0.00 0.00 0.00 3.01
437 438 1.247567 CCACTGCCGTTCCTGAAAAT 58.752 50.000 0.00 0.00 0.00 1.82
454 455 0.179004 CAGCAGTTACAACCCCACCA 60.179 55.000 0.00 0.00 0.00 4.17
462 463 6.521162 TCATCTCTACAAACAGCAGTTACAA 58.479 36.000 0.00 0.00 36.84 2.41
467 468 3.834813 TCCTCATCTCTACAAACAGCAGT 59.165 43.478 0.00 0.00 0.00 4.40
534 535 5.977489 TGTTTCTAGAGTCTTCGGATTCA 57.023 39.130 0.00 0.00 33.80 2.57
536 537 6.109359 CCATTGTTTCTAGAGTCTTCGGATT 58.891 40.000 0.00 0.00 0.00 3.01
554 556 0.035630 GCCTCTCTCACTGCCATTGT 60.036 55.000 0.00 0.00 0.00 2.71
577 579 4.161942 ACATAGAGATCTTCTGCAAGCACT 59.838 41.667 0.00 0.00 36.61 4.40
655 657 5.064441 GTTCATAAATTGCTGCTGAACCT 57.936 39.130 15.33 0.00 39.68 3.50
698 700 7.713942 ACAAGAAGTAAAAGTATGAGAACGGTT 59.286 33.333 0.00 0.00 0.00 4.44
795 799 1.234615 CCAAACATGACGGCCGAACT 61.235 55.000 35.90 10.08 0.00 3.01
820 824 9.740239 TCAAGCTTTATTAAATCATCAGATTGC 57.260 29.630 0.00 0.00 43.52 3.56
860 896 2.031674 GCTGCTGCCACCTGGTTTTT 62.032 55.000 3.85 0.00 37.57 1.94
865 901 0.966875 TTTATGCTGCTGCCACCTGG 60.967 55.000 13.47 0.00 38.71 4.45
1000 1064 0.698818 AGGGGAGAGAAAAACGGCAT 59.301 50.000 0.00 0.00 0.00 4.40
1008 1072 1.612442 CGGGTGGAGGGGAGAGAAA 60.612 63.158 0.00 0.00 0.00 2.52
1112 1179 1.764134 ACCGACACCAGAACCTAAACA 59.236 47.619 0.00 0.00 0.00 2.83
1171 1238 4.002906 CTGGACAGCACCAAACTAGTAA 57.997 45.455 0.00 0.00 39.59 2.24
1456 1536 1.463674 AAACCCGCATGAATCTCCAC 58.536 50.000 0.00 0.00 0.00 4.02
1480 1560 5.726397 TCGATCCCATTTAAACGAAGAAGA 58.274 37.500 0.00 0.00 0.00 2.87
1481 1561 6.417191 TTCGATCCCATTTAAACGAAGAAG 57.583 37.500 5.32 0.00 35.44 2.85
1490 1585 5.624159 AGATCAGCATTCGATCCCATTTAA 58.376 37.500 0.00 0.00 40.17 1.52
1556 1654 5.391097 CGTTGCCATACTTAAAATCCGAACA 60.391 40.000 0.00 0.00 0.00 3.18
1599 1697 3.821841 CCAACCTCACGTGAATTAAAGC 58.178 45.455 20.49 0.00 0.00 3.51
1849 1948 4.985538 AGCCTCAAAATTTCTACAGGTGA 58.014 39.130 0.00 0.00 0.00 4.02
1892 1993 1.041447 TTAGACTACCAGCGGAGGGC 61.041 60.000 1.50 0.00 44.05 5.19
2062 2193 7.979537 ACAGTGAAATAGCACGACATATAAGAA 59.020 33.333 0.00 0.00 43.42 2.52
2063 2194 7.489160 ACAGTGAAATAGCACGACATATAAGA 58.511 34.615 0.00 0.00 43.42 2.10
2534 2677 4.869297 CAGCATGACAAGTTTCCTCTCTAG 59.131 45.833 0.00 0.00 39.69 2.43
2617 2760 0.698238 CAATTCCAGTCACCCTCCCA 59.302 55.000 0.00 0.00 0.00 4.37
2758 2901 6.764308 ATGTTGACCTATTTTCCATCAGTG 57.236 37.500 0.00 0.00 0.00 3.66
2844 2987 3.931578 AGAGCAAGACCAGTATGTTGTC 58.068 45.455 0.00 0.00 0.00 3.18
2931 3075 8.668510 ACTAAGTTATATCAAACATCAGCCTG 57.331 34.615 0.00 0.00 0.00 4.85
3145 3289 1.344438 GATCATATCCACCACCAGCGA 59.656 52.381 0.00 0.00 0.00 4.93
3146 3290 1.800805 GATCATATCCACCACCAGCG 58.199 55.000 0.00 0.00 0.00 5.18
3167 3311 3.048501 GCTACCGTAAAATAGAGGCGAC 58.951 50.000 0.00 0.00 0.00 5.19
3170 3314 3.802685 CAGTGCTACCGTAAAATAGAGGC 59.197 47.826 0.00 0.00 0.00 4.70
3310 3463 2.092323 GACCAGGTTGGCCATAAGAAC 58.908 52.381 6.09 0.00 42.67 3.01
3542 7511 8.046708 TCAGAACCAGTATACAAAGCATAACAT 58.953 33.333 5.50 0.00 0.00 2.71
3622 7591 4.842531 TTTCCACTAATGCTCCATCAGA 57.157 40.909 0.00 0.00 0.00 3.27
3649 7618 1.331756 CTTTCGTGAAGCAGTGCTGTT 59.668 47.619 20.55 3.04 39.62 3.16
3792 7761 7.647907 ACAAATCAGTCAAATTCAGAAATGC 57.352 32.000 0.00 0.00 0.00 3.56
3896 7877 1.066573 GTCACCCTCAGACAGTCCATG 60.067 57.143 0.00 0.00 36.06 3.66
4054 8035 9.434559 GATGGTTAGAAAAATAGCGTCATTTAC 57.565 33.333 0.00 0.00 0.00 2.01
4248 8229 5.144100 CAGGAGGAGGATGAGTTAGTGTAT 58.856 45.833 0.00 0.00 0.00 2.29
4253 8234 2.364970 CTGCAGGAGGAGGATGAGTTAG 59.635 54.545 5.57 0.00 0.00 2.34
4296 8277 3.596214 GGGTATCTTTGTCTTTGCGAGA 58.404 45.455 0.00 0.00 0.00 4.04
4462 8443 3.347216 AGCTAGGGTACAACAATGCTTG 58.653 45.455 0.00 0.00 0.00 4.01
4536 8517 5.144692 AGCTGCATAGTCGATATGAATGT 57.855 39.130 14.95 0.00 43.54 2.71
4556 8537 4.440663 GCAGGTCAATATTTTCCTGGAAGC 60.441 45.833 24.90 14.17 45.11 3.86
4616 8597 9.950680 GCCCAATACATAATATGCACATAATAC 57.049 33.333 0.00 0.00 0.00 1.89
4617 8598 9.130661 GGCCCAATACATAATATGCACATAATA 57.869 33.333 0.00 0.00 0.00 0.98
4618 8599 7.069826 GGGCCCAATACATAATATGCACATAAT 59.930 37.037 19.95 0.00 0.00 1.28
4619 8600 6.379703 GGGCCCAATACATAATATGCACATAA 59.620 38.462 19.95 0.00 0.00 1.90
4620 8601 5.890985 GGGCCCAATACATAATATGCACATA 59.109 40.000 19.95 0.00 0.00 2.29
4621 8602 4.711355 GGGCCCAATACATAATATGCACAT 59.289 41.667 19.95 0.00 0.00 3.21
4622 8603 4.085733 GGGCCCAATACATAATATGCACA 58.914 43.478 19.95 0.00 0.00 4.57
4623 8604 3.128589 CGGGCCCAATACATAATATGCAC 59.871 47.826 24.92 0.00 0.00 4.57
4624 8605 3.351740 CGGGCCCAATACATAATATGCA 58.648 45.455 24.92 0.00 0.00 3.96
4625 8606 2.099098 GCGGGCCCAATACATAATATGC 59.901 50.000 24.92 8.27 0.00 3.14
4626 8607 2.687935 GGCGGGCCCAATACATAATATG 59.312 50.000 24.92 0.60 0.00 1.78
4627 8608 2.580783 AGGCGGGCCCAATACATAATAT 59.419 45.455 24.92 0.00 36.58 1.28
4628 8609 1.989586 AGGCGGGCCCAATACATAATA 59.010 47.619 24.92 0.00 36.58 0.98
4629 8610 0.777446 AGGCGGGCCCAATACATAAT 59.223 50.000 24.92 0.00 36.58 1.28
4630 8611 0.553819 AAGGCGGGCCCAATACATAA 59.446 50.000 24.92 0.00 36.58 1.90
4631 8612 0.109723 GAAGGCGGGCCCAATACATA 59.890 55.000 24.92 0.00 36.58 2.29
4632 8613 1.152756 GAAGGCGGGCCCAATACAT 60.153 57.895 24.92 1.90 36.58 2.29
4633 8614 0.983905 TAGAAGGCGGGCCCAATACA 60.984 55.000 24.92 0.00 36.58 2.29
4634 8615 0.250338 CTAGAAGGCGGGCCCAATAC 60.250 60.000 24.92 8.35 36.58 1.89
4635 8616 0.693092 ACTAGAAGGCGGGCCCAATA 60.693 55.000 24.92 3.53 36.58 1.90
4636 8617 1.571773 AACTAGAAGGCGGGCCCAAT 61.572 55.000 24.92 2.97 36.58 3.16
4637 8618 2.193087 GAACTAGAAGGCGGGCCCAA 62.193 60.000 24.92 0.00 36.58 4.12
4638 8619 2.609610 AACTAGAAGGCGGGCCCA 60.610 61.111 24.92 0.00 36.58 5.36
4639 8620 2.189784 GAACTAGAAGGCGGGCCC 59.810 66.667 13.57 13.57 36.58 5.80
4640 8621 1.911702 AAGGAACTAGAAGGCGGGCC 61.912 60.000 0.18 0.18 38.49 5.80
4641 8622 0.744771 CAAGGAACTAGAAGGCGGGC 60.745 60.000 0.00 0.00 38.49 6.13
4642 8623 0.613777 ACAAGGAACTAGAAGGCGGG 59.386 55.000 0.00 0.00 38.49 6.13
4643 8624 3.821421 ATACAAGGAACTAGAAGGCGG 57.179 47.619 0.00 0.00 38.49 6.13
4644 8625 5.517322 ACTATACAAGGAACTAGAAGGCG 57.483 43.478 0.00 0.00 38.49 5.52
4645 8626 6.875076 TCAACTATACAAGGAACTAGAAGGC 58.125 40.000 0.00 0.00 38.49 4.35
4646 8627 7.124448 ACCTCAACTATACAAGGAACTAGAAGG 59.876 40.741 0.00 0.00 38.49 3.46
4647 8628 8.068892 ACCTCAACTATACAAGGAACTAGAAG 57.931 38.462 0.00 0.00 38.49 2.85
4648 8629 8.431910 AACCTCAACTATACAAGGAACTAGAA 57.568 34.615 0.00 0.00 38.49 2.10
4649 8630 7.148120 CGAACCTCAACTATACAAGGAACTAGA 60.148 40.741 0.00 0.00 38.49 2.43
4650 8631 6.973474 CGAACCTCAACTATACAAGGAACTAG 59.027 42.308 0.00 0.00 38.49 2.57
4651 8632 6.435277 ACGAACCTCAACTATACAAGGAACTA 59.565 38.462 0.00 0.00 38.49 2.24
4653 8634 5.476614 ACGAACCTCAACTATACAAGGAAC 58.523 41.667 0.00 0.00 32.99 3.62
4654 8635 5.733620 ACGAACCTCAACTATACAAGGAA 57.266 39.130 0.00 0.00 32.99 3.36
4655 8636 6.624423 GTTACGAACCTCAACTATACAAGGA 58.376 40.000 0.00 0.00 32.99 3.36
4656 8637 6.882458 GTTACGAACCTCAACTATACAAGG 57.118 41.667 0.00 0.00 34.94 3.61
4671 8652 5.640357 TGATGTACAAAGATGGGTTACGAAC 59.360 40.000 0.00 0.00 0.00 3.95
4672 8653 5.795972 TGATGTACAAAGATGGGTTACGAA 58.204 37.500 0.00 0.00 0.00 3.85
4673 8654 5.408880 TGATGTACAAAGATGGGTTACGA 57.591 39.130 0.00 0.00 0.00 3.43
4674 8655 5.584649 ACATGATGTACAAAGATGGGTTACG 59.415 40.000 0.00 0.00 0.00 3.18
4675 8656 8.677148 ATACATGATGTACAAAGATGGGTTAC 57.323 34.615 7.55 0.00 35.42 2.50
4676 8657 9.772973 GTATACATGATGTACAAAGATGGGTTA 57.227 33.333 7.55 0.00 35.42 2.85
4677 8658 8.271458 TGTATACATGATGTACAAAGATGGGTT 58.729 33.333 7.55 0.00 35.42 4.11
4678 8659 7.801104 TGTATACATGATGTACAAAGATGGGT 58.199 34.615 7.55 0.00 35.42 4.51
4679 8660 8.853077 ATGTATACATGATGTACAAAGATGGG 57.147 34.615 17.60 0.00 38.28 4.00
4705 8686 0.585357 CATTGCTCTCGTGCATAGGC 59.415 55.000 0.00 0.00 42.96 3.93
4706 8687 0.585357 GCATTGCTCTCGTGCATAGG 59.415 55.000 0.16 0.00 42.96 2.57
4707 8688 1.292992 TGCATTGCTCTCGTGCATAG 58.707 50.000 10.49 0.00 43.30 2.23
4708 8689 3.457099 TGCATTGCTCTCGTGCATA 57.543 47.368 10.49 0.00 43.30 3.14
4709 8690 4.306767 TGCATTGCTCTCGTGCAT 57.693 50.000 10.49 0.00 43.30 3.96
4711 8692 1.011463 CGATGCATTGCTCTCGTGC 60.011 57.895 19.38 0.00 39.26 5.34
4712 8693 2.377004 ACGATGCATTGCTCTCGTG 58.623 52.632 27.17 10.29 42.38 4.35
4713 8694 1.699656 GCACGATGCATTGCTCTCGT 61.700 55.000 24.33 24.33 44.26 4.18
4714 8695 1.011463 GCACGATGCATTGCTCTCG 60.011 57.895 23.36 23.36 44.26 4.04
4715 8696 4.991760 GCACGATGCATTGCTCTC 57.008 55.556 14.18 6.02 44.26 3.20
4724 8705 8.967218 ACATAAAATATGTAAATTGCACGATGC 58.033 29.630 1.29 0.00 45.29 3.91
4726 8707 9.462174 CCACATAAAATATGTAAATTGCACGAT 57.538 29.630 2.90 0.00 0.00 3.73
4727 8708 8.462811 ACCACATAAAATATGTAAATTGCACGA 58.537 29.630 2.90 0.00 0.00 4.35
4728 8709 8.627487 ACCACATAAAATATGTAAATTGCACG 57.373 30.769 2.90 0.00 0.00 5.34
4738 8719 8.836413 CGGAAACTGATACCACATAAAATATGT 58.164 33.333 0.00 0.00 0.00 2.29
4739 8720 9.051679 TCGGAAACTGATACCACATAAAATATG 57.948 33.333 0.00 0.00 0.00 1.78
4740 8721 9.621629 TTCGGAAACTGATACCACATAAAATAT 57.378 29.630 0.00 0.00 0.00 1.28
4741 8722 9.621629 ATTCGGAAACTGATACCACATAAAATA 57.378 29.630 0.00 0.00 0.00 1.40
4742 8723 7.931578 TTCGGAAACTGATACCACATAAAAT 57.068 32.000 0.00 0.00 0.00 1.82
4743 8724 7.931578 ATTCGGAAACTGATACCACATAAAA 57.068 32.000 0.00 0.00 0.00 1.52
4744 8725 7.827236 AGAATTCGGAAACTGATACCACATAAA 59.173 33.333 0.00 0.00 0.00 1.40
4745 8726 7.335627 AGAATTCGGAAACTGATACCACATAA 58.664 34.615 0.00 0.00 0.00 1.90
4746 8727 6.884832 AGAATTCGGAAACTGATACCACATA 58.115 36.000 0.00 0.00 0.00 2.29
4747 8728 5.745227 AGAATTCGGAAACTGATACCACAT 58.255 37.500 0.00 0.00 0.00 3.21
4748 8729 5.160607 AGAATTCGGAAACTGATACCACA 57.839 39.130 0.00 0.00 0.00 4.17
4749 8730 7.041984 GGATTAGAATTCGGAAACTGATACCAC 60.042 40.741 0.00 0.00 0.00 4.16
4750 8731 6.990349 GGATTAGAATTCGGAAACTGATACCA 59.010 38.462 0.00 0.00 0.00 3.25
4751 8732 7.217906 AGGATTAGAATTCGGAAACTGATACC 58.782 38.462 0.00 4.70 0.00 2.73
4752 8733 9.413048 CTAGGATTAGAATTCGGAAACTGATAC 57.587 37.037 0.00 1.50 0.00 2.24
4753 8734 8.088981 GCTAGGATTAGAATTCGGAAACTGATA 58.911 37.037 0.00 0.00 0.00 2.15
4754 8735 6.931840 GCTAGGATTAGAATTCGGAAACTGAT 59.068 38.462 0.00 0.37 0.00 2.90
4755 8736 6.281405 GCTAGGATTAGAATTCGGAAACTGA 58.719 40.000 0.00 0.00 0.00 3.41
4756 8737 5.467063 GGCTAGGATTAGAATTCGGAAACTG 59.533 44.000 0.00 0.00 0.00 3.16
4757 8738 5.367060 AGGCTAGGATTAGAATTCGGAAACT 59.633 40.000 0.00 0.47 0.00 2.66
4758 8739 5.612351 AGGCTAGGATTAGAATTCGGAAAC 58.388 41.667 0.00 0.00 0.00 2.78
4759 8740 5.888982 AGGCTAGGATTAGAATTCGGAAA 57.111 39.130 0.00 0.00 0.00 3.13
4760 8741 5.888982 AAGGCTAGGATTAGAATTCGGAA 57.111 39.130 0.00 0.00 0.00 4.30
4761 8742 5.509163 CGAAAGGCTAGGATTAGAATTCGGA 60.509 44.000 0.00 0.00 35.93 4.55
4762 8743 4.686554 CGAAAGGCTAGGATTAGAATTCGG 59.313 45.833 0.00 0.00 35.93 4.30
4763 8744 5.830900 CGAAAGGCTAGGATTAGAATTCG 57.169 43.478 0.00 0.00 34.56 3.34
4833 8814 0.457851 CAGGAGGAGATCACGGTGAC 59.542 60.000 13.92 7.71 0.00 3.67
4834 8815 1.323271 GCAGGAGGAGATCACGGTGA 61.323 60.000 14.01 14.01 0.00 4.02
4835 8816 1.142748 GCAGGAGGAGATCACGGTG 59.857 63.158 0.56 0.56 0.00 4.94
4836 8817 2.060980 GGCAGGAGGAGATCACGGT 61.061 63.158 0.00 0.00 0.00 4.83
4837 8818 2.801631 GGGCAGGAGGAGATCACGG 61.802 68.421 0.00 0.00 0.00 4.94
4838 8819 2.801631 GGGGCAGGAGGAGATCACG 61.802 68.421 0.00 0.00 0.00 4.35
4839 8820 2.801631 CGGGGCAGGAGGAGATCAC 61.802 68.421 0.00 0.00 0.00 3.06
4840 8821 2.444706 CGGGGCAGGAGGAGATCA 60.445 66.667 0.00 0.00 0.00 2.92
4841 8822 3.237741 CCGGGGCAGGAGGAGATC 61.238 72.222 0.00 0.00 0.00 2.75
4842 8823 3.767268 TCCGGGGCAGGAGGAGAT 61.767 66.667 0.00 0.00 34.92 2.75
4843 8824 4.779733 GTCCGGGGCAGGAGGAGA 62.780 72.222 0.00 0.00 41.68 3.71
4863 8844 4.821589 GGGTCAGAGGCCGAAGCG 62.822 72.222 0.00 0.00 41.24 4.68
4864 8845 4.475135 GGGGTCAGAGGCCGAAGC 62.475 72.222 0.00 0.00 38.76 3.86
4865 8846 4.148825 CGGGGTCAGAGGCCGAAG 62.149 72.222 0.00 0.00 0.00 3.79
4909 8890 2.099652 TATCCATGCGAAGGCGGAGG 62.100 60.000 0.00 0.00 42.41 4.30
4910 8891 0.946221 GTATCCATGCGAAGGCGGAG 60.946 60.000 0.00 0.00 42.41 4.63
4911 8892 1.069090 GTATCCATGCGAAGGCGGA 59.931 57.895 0.00 0.00 44.10 5.54
4912 8893 2.310233 CGTATCCATGCGAAGGCGG 61.310 63.158 0.00 0.00 44.10 6.13
4913 8894 2.310233 CCGTATCCATGCGAAGGCG 61.310 63.158 0.00 0.00 44.10 5.52
4914 8895 1.961277 CCCGTATCCATGCGAAGGC 60.961 63.158 0.00 0.00 38.16 4.35
4915 8896 1.301716 CCCCGTATCCATGCGAAGG 60.302 63.158 0.00 0.00 38.16 3.46
4916 8897 1.961277 GCCCCGTATCCATGCGAAG 60.961 63.158 0.00 0.00 38.16 3.79
4917 8898 2.110213 GCCCCGTATCCATGCGAA 59.890 61.111 0.00 0.00 38.16 4.70
4918 8899 2.842462 AGCCCCGTATCCATGCGA 60.842 61.111 0.00 0.00 38.16 5.10
4919 8900 2.357517 GAGCCCCGTATCCATGCG 60.358 66.667 0.00 0.00 35.63 4.73
4920 8901 2.032681 GGAGCCCCGTATCCATGC 59.967 66.667 0.00 0.00 35.54 4.06
4921 8902 0.035458 GAAGGAGCCCCGTATCCATG 59.965 60.000 0.00 0.00 38.12 3.66
4922 8903 0.104934 AGAAGGAGCCCCGTATCCAT 60.105 55.000 0.00 0.00 38.12 3.41
4923 8904 1.048724 CAGAAGGAGCCCCGTATCCA 61.049 60.000 0.00 0.00 38.12 3.41
4924 8905 1.749033 CAGAAGGAGCCCCGTATCC 59.251 63.158 0.00 0.00 37.58 2.59
4925 8906 1.049289 ACCAGAAGGAGCCCCGTATC 61.049 60.000 0.00 0.00 38.69 2.24
4926 8907 0.620700 AACCAGAAGGAGCCCCGTAT 60.621 55.000 0.00 0.00 38.69 3.06
4927 8908 1.229400 AACCAGAAGGAGCCCCGTA 60.229 57.895 0.00 0.00 38.69 4.02
4928 8909 2.529389 AACCAGAAGGAGCCCCGT 60.529 61.111 0.00 0.00 38.69 5.28
4929 8910 2.045926 CAACCAGAAGGAGCCCCG 60.046 66.667 0.00 0.00 38.69 5.73
4930 8911 2.356667 CCAACCAGAAGGAGCCCC 59.643 66.667 0.00 0.00 38.69 5.80
4931 8912 2.356667 CCCAACCAGAAGGAGCCC 59.643 66.667 0.00 0.00 38.69 5.19
4932 8913 2.356667 CCCCAACCAGAAGGAGCC 59.643 66.667 0.00 0.00 38.69 4.70
4933 8914 2.361737 GCCCCAACCAGAAGGAGC 60.362 66.667 0.00 0.00 38.69 4.70
4934 8915 1.303643 GTGCCCCAACCAGAAGGAG 60.304 63.158 0.00 0.00 38.69 3.69
4935 8916 2.840753 GGTGCCCCAACCAGAAGGA 61.841 63.158 0.00 0.00 40.22 3.36
4936 8917 2.283173 GGTGCCCCAACCAGAAGG 60.283 66.667 0.00 0.00 40.22 3.46
4937 8918 2.520458 TGGTGCCCCAACCAGAAG 59.480 61.111 0.00 0.00 45.43 2.85
4942 8923 2.282462 CTGACTGGTGCCCCAACC 60.282 66.667 0.00 0.00 41.27 3.77
4943 8924 1.898574 CACTGACTGGTGCCCCAAC 60.899 63.158 0.00 0.00 41.27 3.77
4944 8925 2.515398 CACTGACTGGTGCCCCAA 59.485 61.111 0.00 0.00 41.27 4.12
4945 8926 3.569210 CCACTGACTGGTGCCCCA 61.569 66.667 0.00 0.00 38.87 4.96
4946 8927 4.351054 CCCACTGACTGGTGCCCC 62.351 72.222 0.00 0.00 38.60 5.80
4947 8928 3.553095 GACCCACTGACTGGTGCCC 62.553 68.421 0.00 0.00 38.60 5.36
4948 8929 2.032681 GACCCACTGACTGGTGCC 59.967 66.667 0.00 0.00 38.60 5.01
4949 8930 1.148273 TTGACCCACTGACTGGTGC 59.852 57.895 0.00 0.00 38.60 5.01
4950 8931 0.180171 TGTTGACCCACTGACTGGTG 59.820 55.000 0.00 0.00 38.60 4.17
4951 8932 1.072331 GATGTTGACCCACTGACTGGT 59.928 52.381 0.00 0.00 38.60 4.00
4952 8933 1.611673 GGATGTTGACCCACTGACTGG 60.612 57.143 0.00 0.00 40.26 4.00
4953 8934 1.813513 GGATGTTGACCCACTGACTG 58.186 55.000 0.00 0.00 0.00 3.51
4954 8935 0.321671 CGGATGTTGACCCACTGACT 59.678 55.000 0.00 0.00 0.00 3.41
4955 8936 1.298859 GCGGATGTTGACCCACTGAC 61.299 60.000 0.00 0.00 0.00 3.51
4956 8937 1.003839 GCGGATGTTGACCCACTGA 60.004 57.895 0.00 0.00 0.00 3.41
4957 8938 2.040544 GGCGGATGTTGACCCACTG 61.041 63.158 0.00 0.00 0.00 3.66
4958 8939 2.351276 GGCGGATGTTGACCCACT 59.649 61.111 0.00 0.00 0.00 4.00
4959 8940 2.750237 GGGCGGATGTTGACCCAC 60.750 66.667 0.00 0.00 42.33 4.61
4961 8942 2.120909 CATGGGCGGATGTTGACCC 61.121 63.158 0.00 0.00 43.14 4.46
4962 8943 2.120909 CCATGGGCGGATGTTGACC 61.121 63.158 2.85 0.00 0.00 4.02
4963 8944 1.077787 TCCATGGGCGGATGTTGAC 60.078 57.895 13.02 0.00 0.00 3.18
4964 8945 1.224315 CTCCATGGGCGGATGTTGA 59.776 57.895 13.02 0.00 33.56 3.18
4965 8946 2.484062 GCTCCATGGGCGGATGTTG 61.484 63.158 13.02 0.00 33.56 3.33
4966 8947 2.124151 GCTCCATGGGCGGATGTT 60.124 61.111 13.02 0.00 33.56 2.71
4967 8948 3.410628 TGCTCCATGGGCGGATGT 61.411 61.111 13.02 0.00 33.56 3.06
4968 8949 2.593725 CTGCTCCATGGGCGGATG 60.594 66.667 22.71 9.40 38.23 3.51
4969 8950 4.575973 GCTGCTCCATGGGCGGAT 62.576 66.667 28.27 0.00 38.23 4.18
4973 8954 3.455469 GTTGGCTGCTCCATGGGC 61.455 66.667 13.02 14.76 46.04 5.36
4974 8955 2.757099 GGTTGGCTGCTCCATGGG 60.757 66.667 13.02 3.69 46.04 4.00
4975 8956 3.136123 CGGTTGGCTGCTCCATGG 61.136 66.667 4.97 4.97 46.04 3.66
4976 8957 3.136123 CCGGTTGGCTGCTCCATG 61.136 66.667 0.00 0.00 46.04 3.66
4986 8967 4.974721 ACAAGGCTGGCCGGTTGG 62.975 66.667 14.55 2.04 41.95 3.77
4987 8968 2.026945 AAAACAAGGCTGGCCGGTTG 62.027 55.000 14.55 13.23 41.95 3.77
4988 8969 1.760480 AAAACAAGGCTGGCCGGTT 60.760 52.632 14.55 15.26 41.95 4.44
4989 8970 2.123468 AAAACAAGGCTGGCCGGT 60.123 55.556 14.55 6.10 41.95 5.28
4990 8971 2.339712 CAAAACAAGGCTGGCCGG 59.660 61.111 7.41 7.41 41.95 6.13
4991 8972 2.356194 GCAAAACAAGGCTGGCCG 60.356 61.111 5.93 0.00 41.95 6.13
4992 8973 2.031012 GGCAAAACAAGGCTGGCC 59.969 61.111 3.00 3.00 0.00 5.36
4993 8974 1.005748 GAGGCAAAACAAGGCTGGC 60.006 57.895 0.00 0.00 42.47 4.85
4994 8975 1.286880 CGAGGCAAAACAAGGCTGG 59.713 57.895 0.00 0.00 42.47 4.85
4995 8976 1.372128 GCGAGGCAAAACAAGGCTG 60.372 57.895 0.00 0.00 42.47 4.85
4996 8977 1.529244 AGCGAGGCAAAACAAGGCT 60.529 52.632 0.00 0.00 45.38 4.58
4997 8978 1.372128 CAGCGAGGCAAAACAAGGC 60.372 57.895 0.00 0.00 0.00 4.35
4998 8979 1.372128 GCAGCGAGGCAAAACAAGG 60.372 57.895 0.00 0.00 0.00 3.61
4999 8980 1.372128 GGCAGCGAGGCAAAACAAG 60.372 57.895 1.18 0.00 43.51 3.16
5000 8981 2.727544 GGCAGCGAGGCAAAACAA 59.272 55.556 1.18 0.00 43.51 2.83
5001 8982 3.294493 GGGCAGCGAGGCAAAACA 61.294 61.111 7.94 0.00 46.44 2.83
5002 8983 2.564721 AAGGGCAGCGAGGCAAAAC 61.565 57.895 7.94 0.00 46.44 2.43
5003 8984 2.203480 AAGGGCAGCGAGGCAAAA 60.203 55.556 7.94 0.00 46.44 2.44
5004 8985 2.985282 CAAGGGCAGCGAGGCAAA 60.985 61.111 7.94 0.00 46.44 3.68
5015 8996 0.967380 ACACATAGCCTTGCAAGGGC 60.967 55.000 39.51 31.26 46.56 5.19
5016 8997 2.017049 GTACACATAGCCTTGCAAGGG 58.983 52.381 39.51 27.39 46.56 3.95
5018 8999 1.665679 CCGTACACATAGCCTTGCAAG 59.334 52.381 19.93 19.93 0.00 4.01
5019 9000 1.732941 CCGTACACATAGCCTTGCAA 58.267 50.000 0.00 0.00 0.00 4.08
5020 9001 0.742990 GCCGTACACATAGCCTTGCA 60.743 55.000 0.00 0.00 0.00 4.08
5021 9002 1.436983 GGCCGTACACATAGCCTTGC 61.437 60.000 0.00 0.00 42.34 4.01
5022 9003 0.107897 TGGCCGTACACATAGCCTTG 60.108 55.000 0.00 0.00 45.94 3.61
5023 9004 0.837272 ATGGCCGTACACATAGCCTT 59.163 50.000 0.00 0.00 45.94 4.35
5024 9005 0.106708 CATGGCCGTACACATAGCCT 59.893 55.000 0.00 0.00 45.94 4.58
5025 9006 1.507141 GCATGGCCGTACACATAGCC 61.507 60.000 0.00 0.00 45.96 3.93
5026 9007 1.831389 CGCATGGCCGTACACATAGC 61.831 60.000 0.00 0.00 0.00 2.97
5027 9008 0.529773 ACGCATGGCCGTACACATAG 60.530 55.000 0.00 0.00 40.08 2.23
5028 9009 0.745468 TACGCATGGCCGTACACATA 59.255 50.000 0.00 0.00 42.20 2.29
5029 9010 1.518302 TACGCATGGCCGTACACAT 59.482 52.632 0.00 0.00 42.20 3.21
5030 9011 2.971452 TACGCATGGCCGTACACA 59.029 55.556 0.00 0.00 42.20 3.72
5045 9026 3.876198 CCTTGCATGGCGCCGTAC 61.876 66.667 23.37 17.51 41.33 3.67
5053 9034 2.998480 TTGGCTGGCCTTGCATGG 60.998 61.111 19.81 14.22 36.94 3.66
5054 9035 2.263540 GTTGGCTGGCCTTGCATG 59.736 61.111 19.81 0.00 36.94 4.06
5055 9036 3.376078 CGTTGGCTGGCCTTGCAT 61.376 61.111 19.81 0.00 36.94 3.96
5067 9048 2.026945 AAAACAAGGCTGCCCGTTGG 62.027 55.000 20.83 7.74 35.76 3.77
5068 9049 0.875474 CAAAACAAGGCTGCCCGTTG 60.875 55.000 20.83 18.69 35.76 4.10
5069 9050 1.441311 CAAAACAAGGCTGCCCGTT 59.559 52.632 16.57 16.27 35.76 4.44
5070 9051 3.128375 CAAAACAAGGCTGCCCGT 58.872 55.556 16.57 10.51 35.76 5.28
5071 9052 2.356194 GCAAAACAAGGCTGCCCG 60.356 61.111 16.57 9.78 35.76 6.13
5074 9055 1.372128 CGAGGCAAAACAAGGCTGC 60.372 57.895 0.00 0.00 42.47 5.25
5075 9056 1.372128 GCGAGGCAAAACAAGGCTG 60.372 57.895 0.00 0.00 42.47 4.85
5076 9057 1.529244 AGCGAGGCAAAACAAGGCT 60.529 52.632 0.00 0.00 45.38 4.58
5077 9058 1.372128 CAGCGAGGCAAAACAAGGC 60.372 57.895 0.00 0.00 0.00 4.35
5078 9059 1.372128 GCAGCGAGGCAAAACAAGG 60.372 57.895 0.00 0.00 0.00 3.61
5079 9060 1.372128 GGCAGCGAGGCAAAACAAG 60.372 57.895 1.18 0.00 43.51 3.16
5080 9061 2.727544 GGCAGCGAGGCAAAACAA 59.272 55.556 1.18 0.00 43.51 2.83
5081 9062 3.294493 GGGCAGCGAGGCAAAACA 61.294 61.111 7.94 0.00 46.44 2.83
5082 9063 2.564721 AAGGGCAGCGAGGCAAAAC 61.565 57.895 7.94 0.00 46.44 2.43
5083 9064 2.203480 AAGGGCAGCGAGGCAAAA 60.203 55.556 7.94 0.00 46.44 2.44
5084 9065 2.985282 CAAGGGCAGCGAGGCAAA 60.985 61.111 7.94 0.00 46.44 3.68
5095 9076 0.972471 AACCATAGCCTTGCAAGGGC 60.972 55.000 39.51 31.26 46.56 5.19
5096 9077 1.560505 AAACCATAGCCTTGCAAGGG 58.439 50.000 39.51 27.06 46.56 3.95
5098 9079 2.340337 GCAAAACCATAGCCTTGCAAG 58.660 47.619 19.93 19.93 42.91 4.01
5099 9080 1.001860 GGCAAAACCATAGCCTTGCAA 59.998 47.619 0.00 0.00 44.72 4.08
5100 9081 0.607620 GGCAAAACCATAGCCTTGCA 59.392 50.000 7.81 0.00 44.72 4.08
5101 9082 3.441244 GGCAAAACCATAGCCTTGC 57.559 52.632 0.00 0.00 44.92 4.01
5106 9087 0.099436 CAGCGAGGCAAAACCATAGC 59.901 55.000 0.00 0.00 43.14 2.97
5107 9088 0.099436 GCAGCGAGGCAAAACCATAG 59.901 55.000 0.00 0.00 43.14 2.23
5108 9089 1.312371 GGCAGCGAGGCAAAACCATA 61.312 55.000 1.18 0.00 43.14 2.74
5109 9090 2.639327 GGCAGCGAGGCAAAACCAT 61.639 57.895 1.18 0.00 43.14 3.55
5110 9091 3.294493 GGCAGCGAGGCAAAACCA 61.294 61.111 1.18 0.00 43.14 3.67
5111 9092 4.056125 GGGCAGCGAGGCAAAACC 62.056 66.667 7.94 0.00 46.44 3.27
5112 9093 2.564721 AAGGGCAGCGAGGCAAAAC 61.565 57.895 7.94 0.00 46.44 2.43
5113 9094 2.203480 AAGGGCAGCGAGGCAAAA 60.203 55.556 7.94 0.00 46.44 2.44
5114 9095 2.985282 CAAGGGCAGCGAGGCAAA 60.985 61.111 7.94 0.00 46.44 3.68
5125 9106 1.025041 GTACATAGCCTTGCAAGGGC 58.975 55.000 39.51 31.26 46.56 5.19
5126 9107 1.299541 CGTACATAGCCTTGCAAGGG 58.700 55.000 39.51 27.39 46.56 3.95
5128 9109 0.657840 GCCGTACATAGCCTTGCAAG 59.342 55.000 19.93 19.93 0.00 4.01
5129 9110 0.746563 GGCCGTACATAGCCTTGCAA 60.747 55.000 10.53 0.00 46.14 4.08
5130 9111 1.153249 GGCCGTACATAGCCTTGCA 60.153 57.895 10.53 0.00 46.14 4.08
5131 9112 3.732470 GGCCGTACATAGCCTTGC 58.268 61.111 10.53 0.00 46.14 4.01
5136 9117 0.319211 TACGCATGGCCGTACATAGC 60.319 55.000 0.00 0.00 42.20 2.97
5137 9118 3.877874 TACGCATGGCCGTACATAG 57.122 52.632 0.00 0.00 42.20 2.23
5153 9134 3.876198 CCTTGCATGGCGCCGTAC 61.876 66.667 23.37 17.51 41.33 3.67
5161 9142 2.998480 TTGGCTGGCCTTGCATGG 60.998 61.111 19.81 14.22 36.94 3.66
5162 9143 2.263540 GTTGGCTGGCCTTGCATG 59.736 61.111 19.81 0.00 36.94 4.06
5163 9144 3.376078 CGTTGGCTGGCCTTGCAT 61.376 61.111 19.81 0.00 36.94 3.96
5175 9156 2.026945 AAAACAAGGCTGCCCGTTGG 62.027 55.000 20.83 7.74 35.76 3.77
5176 9157 0.875474 CAAAACAAGGCTGCCCGTTG 60.875 55.000 20.83 18.69 35.76 4.10
5177 9158 1.441311 CAAAACAAGGCTGCCCGTT 59.559 52.632 16.57 16.27 35.76 4.44
5178 9159 3.128375 CAAAACAAGGCTGCCCGT 58.872 55.556 16.57 10.51 35.76 5.28
5179 9160 2.356194 GCAAAACAAGGCTGCCCG 60.356 61.111 16.57 9.78 35.76 6.13
5182 9163 1.372128 CGAGGCAAAACAAGGCTGC 60.372 57.895 0.00 0.00 42.47 5.25
5183 9164 1.372128 GCGAGGCAAAACAAGGCTG 60.372 57.895 0.00 0.00 42.47 4.85
5184 9165 1.529244 AGCGAGGCAAAACAAGGCT 60.529 52.632 0.00 0.00 45.38 4.58
5185 9166 1.372128 CAGCGAGGCAAAACAAGGC 60.372 57.895 0.00 0.00 0.00 4.35
5186 9167 1.372128 GCAGCGAGGCAAAACAAGG 60.372 57.895 0.00 0.00 0.00 3.61
5187 9168 1.372128 GGCAGCGAGGCAAAACAAG 60.372 57.895 1.18 0.00 43.51 3.16
5188 9169 2.727544 GGCAGCGAGGCAAAACAA 59.272 55.556 1.18 0.00 43.51 2.83
5189 9170 3.294493 GGGCAGCGAGGCAAAACA 61.294 61.111 7.94 0.00 46.44 2.83
5190 9171 2.564721 AAGGGCAGCGAGGCAAAAC 61.565 57.895 7.94 0.00 46.44 2.43
5191 9172 2.203480 AAGGGCAGCGAGGCAAAA 60.203 55.556 7.94 0.00 46.44 2.44
5192 9173 2.985282 CAAGGGCAGCGAGGCAAA 60.985 61.111 7.94 0.00 46.44 3.68
5210 9191 2.657757 CGCCGTACGCATAGCCATG 61.658 63.158 10.49 0.00 37.30 3.66
5211 9192 2.355837 CGCCGTACGCATAGCCAT 60.356 61.111 10.49 0.00 37.30 4.40
5221 9202 3.876198 CCTTGCATGGCGCCGTAC 61.876 66.667 23.37 17.51 41.33 3.67
5222 9203 4.402528 ACCTTGCATGGCGCCGTA 62.403 61.111 23.37 4.40 41.33 4.02
5228 9209 4.465512 CGACGCACCTTGCATGGC 62.466 66.667 18.17 4.78 45.36 4.40
5229 9210 2.741985 TCGACGCACCTTGCATGG 60.742 61.111 16.76 16.76 45.36 3.66
5230 9211 2.476051 GTCGACGCACCTTGCATG 59.524 61.111 0.00 0.00 45.36 4.06
5231 9212 2.742372 GGTCGACGCACCTTGCAT 60.742 61.111 9.92 0.00 45.36 3.96
5244 9225 2.237751 CCTAAAGGCATCGCGGTCG 61.238 63.158 6.13 0.00 0.00 4.79
5245 9226 3.719214 CCTAAAGGCATCGCGGTC 58.281 61.111 6.13 0.00 0.00 4.79
5292 9273 0.808453 TAGTTAGCGATGCGGTTGGC 60.808 55.000 0.00 0.00 38.83 4.52
5293 9274 0.928229 GTAGTTAGCGATGCGGTTGG 59.072 55.000 0.00 0.00 38.83 3.77
5294 9275 1.635844 TGTAGTTAGCGATGCGGTTG 58.364 50.000 0.00 0.00 38.83 3.77
5295 9276 2.596904 ATGTAGTTAGCGATGCGGTT 57.403 45.000 0.00 0.00 38.83 4.44
5296 9277 2.201732 CAATGTAGTTAGCGATGCGGT 58.798 47.619 0.00 0.00 41.50 5.68
5297 9278 1.070577 GCAATGTAGTTAGCGATGCGG 60.071 52.381 0.00 0.00 0.00 5.69
5298 9279 1.860950 AGCAATGTAGTTAGCGATGCG 59.139 47.619 0.00 0.00 37.40 4.73
5299 9280 2.600792 GCAGCAATGTAGTTAGCGATGC 60.601 50.000 0.00 0.00 0.00 3.91
5300 9281 2.868583 AGCAGCAATGTAGTTAGCGATG 59.131 45.455 0.00 0.00 0.00 3.84
5301 9282 2.868583 CAGCAGCAATGTAGTTAGCGAT 59.131 45.455 0.00 0.00 0.00 4.58
5302 9283 2.270923 CAGCAGCAATGTAGTTAGCGA 58.729 47.619 0.00 0.00 0.00 4.93
5303 9284 1.267732 GCAGCAGCAATGTAGTTAGCG 60.268 52.381 0.00 0.00 41.58 4.26
5304 9285 1.064654 GGCAGCAGCAATGTAGTTAGC 59.935 52.381 2.65 0.00 44.61 3.09
5305 9286 1.328680 CGGCAGCAGCAATGTAGTTAG 59.671 52.381 2.65 0.00 44.61 2.34
5306 9287 1.368641 CGGCAGCAGCAATGTAGTTA 58.631 50.000 2.65 0.00 44.61 2.24
5307 9288 1.926511 GCGGCAGCAGCAATGTAGTT 61.927 55.000 13.20 0.00 44.61 2.24
5308 9289 2.401766 GCGGCAGCAGCAATGTAGT 61.402 57.895 13.20 0.00 44.61 2.73
5309 9290 2.406401 GCGGCAGCAGCAATGTAG 59.594 61.111 13.20 0.00 44.61 2.74
5347 9328 3.186047 GCCATCGTTGGTCCGACG 61.186 66.667 23.63 23.63 45.57 5.12
5348 9329 3.186047 CGCCATCGTTGGTCCGAC 61.186 66.667 13.90 0.00 45.57 4.79
5381 9362 1.376037 GGGACAACAGAGGCGAAGG 60.376 63.158 0.00 0.00 0.00 3.46
5382 9363 1.738099 CGGGACAACAGAGGCGAAG 60.738 63.158 0.00 0.00 0.00 3.79
5383 9364 2.342279 CGGGACAACAGAGGCGAA 59.658 61.111 0.00 0.00 0.00 4.70
5384 9365 4.373116 GCGGGACAACAGAGGCGA 62.373 66.667 0.00 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.