Multiple sequence alignment - TraesCS2A01G224100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G224100 chr2A 100.000 4458 0 0 1 4458 222190660 222195117 0.000000e+00 8233.0
1 TraesCS2A01G224100 chr2D 94.466 3343 98 45 710 4020 201092183 201095470 0.000000e+00 5068.0
2 TraesCS2A01G224100 chr2D 96.104 77 2 1 4234 4309 201095493 201095569 1.680000e-24 124.0
3 TraesCS2A01G224100 chr2D 87.879 66 7 1 16 81 201089534 201089598 4.780000e-10 76.8
4 TraesCS2A01G224100 chr2B 91.334 3531 151 54 598 4020 377334291 377337774 0.000000e+00 4682.0
5 TraesCS2A01G224100 chr2B 95.928 221 9 0 4017 4237 529109778 529109558 4.240000e-95 359.0
6 TraesCS2A01G224100 chr2B 96.154 78 1 2 4234 4309 377337797 377337874 4.680000e-25 126.0
7 TraesCS2A01G224100 chr2B 100.000 33 0 0 20 52 377321104 377321136 1.340000e-05 62.1
8 TraesCS2A01G224100 chr3A 99.095 221 0 1 4017 4237 537506943 537506725 3.230000e-106 396.0
9 TraesCS2A01G224100 chr5B 94.545 220 12 0 4017 4236 440262951 440262732 1.540000e-89 340.0
10 TraesCS2A01G224100 chr1A 94.907 216 11 0 4017 4232 530169972 530170187 5.520000e-89 339.0
11 TraesCS2A01G224100 chr1B 93.778 225 12 2 4017 4241 363099 362877 1.990000e-88 337.0
12 TraesCS2A01G224100 chr1B 92.952 227 13 2 4017 4241 363994 363769 1.200000e-85 327.0
13 TraesCS2A01G224100 chr7B 94.118 221 11 2 4017 4237 529726126 529726344 7.150000e-88 335.0
14 TraesCS2A01G224100 chr3B 93.013 229 14 2 4017 4245 16893359 16893133 2.570000e-87 333.0
15 TraesCS2A01G224100 chr3B 93.274 223 13 2 4017 4239 614193901 614194121 1.200000e-85 327.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G224100 chr2A 222190660 222195117 4457 False 8233.000000 8233 100.000000 1 4458 1 chr2A.!!$F1 4457
1 TraesCS2A01G224100 chr2D 201089534 201095569 6035 False 1756.266667 5068 92.816333 16 4309 3 chr2D.!!$F1 4293
2 TraesCS2A01G224100 chr2B 377334291 377337874 3583 False 2404.000000 4682 93.744000 598 4309 2 chr2B.!!$F2 3711
3 TraesCS2A01G224100 chr1B 362877 363994 1117 True 332.000000 337 93.365000 4017 4241 2 chr1B.!!$R1 224


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
370 2124 0.179129 CCGTTTTGGCATGCATCTCC 60.179 55.000 21.36 1.34 0.00 3.71 F
382 2136 0.179215 GCATCTCCAGCAAACGTTCG 60.179 55.000 0.00 0.00 0.00 3.95 F
526 2280 0.767998 TGGTTGTAGCACATGACCCA 59.232 50.000 0.00 0.00 29.92 4.51 F
990 3028 1.457643 CTATCCCCGACCAGGAGCA 60.458 63.158 0.00 0.00 45.00 4.26 F
991 3029 1.457643 TATCCCCGACCAGGAGCAG 60.458 63.158 0.00 0.00 45.00 4.24 F
2887 4968 0.912486 AGATGCACTACCACTTCCCC 59.088 55.000 0.00 0.00 0.00 4.81 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1587 3625 1.069513 CCGCACTTCCATATCCGGTAA 59.930 52.381 0.00 0.0 0.00 2.85 R
1692 3730 3.151022 CCGGCCTCAGTCTCCTCC 61.151 72.222 0.00 0.0 0.00 4.30 R
1872 3910 4.988716 AGCCACGTGGTCCTCGGA 62.989 66.667 33.92 0.0 37.57 4.55 R
2869 4950 0.618458 TGGGGAAGTGGTAGTGCATC 59.382 55.000 0.00 0.0 0.00 3.91 R
2958 5042 2.225491 ACCGAATCCATTGTGTGTTTCG 59.775 45.455 0.00 0.0 39.39 3.46 R
3858 5991 0.174845 CATTGTGCTTGGGGATGCAG 59.825 55.000 0.00 0.0 40.06 4.41 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 5.587388 AGTACTAGCATTTGCATTGCATT 57.413 34.783 20.40 0.18 45.16 3.56
54 55 4.196626 ACTAGCATTTGCATTGCATTGT 57.803 36.364 20.40 13.64 45.16 2.71
58 59 3.057876 AGCATTTGCATTGCATTGTTTGG 60.058 39.130 20.40 0.00 45.16 3.28
59 60 3.827625 CATTTGCATTGCATTGTTTGGG 58.172 40.909 12.95 0.00 38.76 4.12
65 66 4.001226 GCATTGTTTGGGCGGCCA 62.001 61.111 29.27 29.27 0.00 5.36
82 83 0.680618 CCACAAGGCTGGATTTGCAA 59.319 50.000 0.00 0.00 32.30 4.08
83 84 1.070445 CCACAAGGCTGGATTTGCAAA 59.930 47.619 15.44 15.44 32.30 3.68
85 86 3.204526 CACAAGGCTGGATTTGCAAAAA 58.795 40.909 17.19 4.23 0.00 1.94
155 194 0.775861 GCCGTTGCGACAACAATTTC 59.224 50.000 18.32 3.65 0.00 2.17
159 198 0.665835 TTGCGACAACAATTTCCGCT 59.334 45.000 0.00 0.00 45.28 5.52
162 201 2.239201 GCGACAACAATTTCCGCTTAC 58.761 47.619 0.00 0.00 42.24 2.34
169 208 4.640789 ACAATTTCCGCTTACAACAACA 57.359 36.364 0.00 0.00 0.00 3.33
172 211 5.461737 ACAATTTCCGCTTACAACAACATTG 59.538 36.000 0.00 0.00 0.00 2.82
178 217 5.527951 TCCGCTTACAACAACATTGTCTTTA 59.472 36.000 0.00 0.00 41.31 1.85
179 218 5.851177 CCGCTTACAACAACATTGTCTTTAG 59.149 40.000 0.00 0.00 41.31 1.85
181 220 6.293190 CGCTTACAACAACATTGTCTTTAGGA 60.293 38.462 0.00 0.00 41.31 2.94
182 221 7.573096 CGCTTACAACAACATTGTCTTTAGGAT 60.573 37.037 0.00 0.00 41.31 3.24
183 222 7.750903 GCTTACAACAACATTGTCTTTAGGATC 59.249 37.037 0.00 0.00 41.31 3.36
184 223 6.575162 ACAACAACATTGTCTTTAGGATCC 57.425 37.500 2.48 2.48 41.31 3.36
185 224 5.476945 ACAACAACATTGTCTTTAGGATCCC 59.523 40.000 8.55 0.00 41.31 3.85
186 225 5.255397 ACAACATTGTCTTTAGGATCCCA 57.745 39.130 8.55 0.00 36.50 4.37
187 226 5.640147 ACAACATTGTCTTTAGGATCCCAA 58.360 37.500 8.55 4.64 36.50 4.12
191 1932 6.735556 ACATTGTCTTTAGGATCCCAAATCT 58.264 36.000 8.55 0.00 0.00 2.40
200 1941 5.659849 AGGATCCCAAATCTCAAATAGCT 57.340 39.130 8.55 0.00 0.00 3.32
211 1952 9.559958 CAAATCTCAAATAGCTAACGAATGTTT 57.440 29.630 0.00 0.00 39.54 2.83
221 1962 4.213482 GCTAACGAATGTTTGTTGAGAGGT 59.787 41.667 8.32 0.00 39.54 3.85
239 1980 2.760092 AGGTATGCCATTTGCGAACATT 59.240 40.909 1.54 0.00 45.60 2.71
246 1987 5.233225 TGCCATTTGCGAACATTTTTATGA 58.767 33.333 0.00 0.00 45.60 2.15
264 2005 9.988350 TTTTTATGATAAATTCTTCAGAGCGAC 57.012 29.630 0.00 0.00 0.00 5.19
265 2006 8.948631 TTTATGATAAATTCTTCAGAGCGACT 57.051 30.769 0.00 0.00 0.00 4.18
267 2008 6.653273 TGATAAATTCTTCAGAGCGACTTG 57.347 37.500 0.00 0.00 0.00 3.16
269 2010 1.731720 ATTCTTCAGAGCGACTTGGC 58.268 50.000 0.00 0.00 0.00 4.52
272 2013 2.103373 TCTTCAGAGCGACTTGGCTAT 58.897 47.619 0.00 0.00 44.93 2.97
287 2039 8.394877 CGACTTGGCTATGTTGATATTTTTGTA 58.605 33.333 0.00 0.00 0.00 2.41
315 2067 8.710835 ATTTACGGTGTTCACTTGAAAATTTT 57.289 26.923 2.28 2.28 35.58 1.82
324 2076 7.550551 TGTTCACTTGAAAATTTTGCCATGTTA 59.449 29.630 8.47 0.00 35.58 2.41
339 2091 2.627863 TGTTACCGCAACATGAATGC 57.372 45.000 15.28 15.28 42.29 3.56
340 2092 2.158559 TGTTACCGCAACATGAATGCT 58.841 42.857 20.35 9.68 42.29 3.79
341 2093 2.095314 TGTTACCGCAACATGAATGCTG 60.095 45.455 20.35 17.37 42.29 4.41
342 2094 1.819928 TACCGCAACATGAATGCTGT 58.180 45.000 21.25 21.25 42.63 4.40
343 2095 0.241749 ACCGCAACATGAATGCTGTG 59.758 50.000 18.58 12.65 39.34 3.66
347 2101 3.051327 CGCAACATGAATGCTGTGAAAA 58.949 40.909 20.35 0.00 41.64 2.29
351 2105 5.389098 GCAACATGAATGCTGTGAAAACATC 60.389 40.000 17.19 0.00 40.64 3.06
370 2124 0.179129 CCGTTTTGGCATGCATCTCC 60.179 55.000 21.36 1.34 0.00 3.71
380 2134 1.200716 CATGCATCTCCAGCAAACGTT 59.799 47.619 0.00 0.00 46.27 3.99
382 2136 0.179215 GCATCTCCAGCAAACGTTCG 60.179 55.000 0.00 0.00 0.00 3.95
399 2153 3.551551 GTTCGCGGAATACCATTATTGC 58.448 45.455 6.13 0.00 33.71 3.56
406 2160 6.215845 GCGGAATACCATTATTGCATCTTTT 58.784 36.000 0.00 0.00 36.14 2.27
407 2161 6.701400 GCGGAATACCATTATTGCATCTTTTT 59.299 34.615 0.00 0.00 36.14 1.94
449 2203 2.927477 TCTTTAACGGACGCTAATGCAG 59.073 45.455 0.00 0.00 39.64 4.41
459 2213 4.570772 GGACGCTAATGCAGAGTATTTCAA 59.429 41.667 0.00 0.00 37.42 2.69
467 2221 7.919313 AATGCAGAGTATTTCAATTATTGCG 57.081 32.000 0.00 0.00 32.03 4.85
468 2222 6.435430 TGCAGAGTATTTCAATTATTGCGT 57.565 33.333 0.00 0.00 32.03 5.24
472 2226 7.484641 GCAGAGTATTTCAATTATTGCGTTTCA 59.515 33.333 0.00 0.00 0.00 2.69
485 2239 1.730064 GCGTTTCAGGTCTTGCGAATA 59.270 47.619 0.00 0.00 0.00 1.75
494 2248 2.161609 GGTCTTGCGAATAACACAAGGG 59.838 50.000 0.00 0.00 40.90 3.95
525 2279 1.165270 GTGGTTGTAGCACATGACCC 58.835 55.000 0.00 0.00 45.26 4.46
526 2280 0.767998 TGGTTGTAGCACATGACCCA 59.232 50.000 0.00 0.00 29.92 4.51
528 2282 1.544537 GGTTGTAGCACATGACCCACA 60.545 52.381 0.00 0.00 0.00 4.17
529 2283 2.436417 GTTGTAGCACATGACCCACAT 58.564 47.619 0.00 0.00 40.17 3.21
542 2296 4.671831 TGACCCACATGTGTATCCAAAAT 58.328 39.130 23.79 0.00 0.00 1.82
543 2297 5.083122 TGACCCACATGTGTATCCAAAATT 58.917 37.500 23.79 0.00 0.00 1.82
544 2298 5.541868 TGACCCACATGTGTATCCAAAATTT 59.458 36.000 23.79 0.00 0.00 1.82
545 2299 5.792741 ACCCACATGTGTATCCAAAATTTG 58.207 37.500 23.79 0.00 0.00 2.32
572 2326 7.769272 GAATTTTCTGTCAAATTCCACACAA 57.231 32.000 12.74 0.00 43.22 3.33
581 2335 8.755696 TGTCAAATTCCACACAATATTTTAGC 57.244 30.769 0.00 0.00 0.00 3.09
589 2343 8.325421 TCCACACAATATTTTAGCGAGTTTTA 57.675 30.769 0.00 0.00 0.00 1.52
591 2345 9.567848 CCACACAATATTTTAGCGAGTTTTATT 57.432 29.630 0.00 0.00 0.00 1.40
633 2653 6.759827 TGAACTTGTTTTGTGGTACTAGACTC 59.240 38.462 0.00 0.00 0.00 3.36
691 2721 6.882610 ATTGAGCAAAACTACACTGATTGA 57.117 33.333 0.00 0.00 0.00 2.57
696 2726 7.648908 TGAGCAAAACTACACTGATTGATTTTG 59.351 33.333 0.00 0.00 38.14 2.44
707 2737 8.902806 ACACTGATTGATTTTGTTTAGAACAGA 58.097 29.630 0.00 0.00 43.27 3.41
708 2738 9.173939 CACTGATTGATTTTGTTTAGAACAGAC 57.826 33.333 0.00 0.00 43.27 3.51
709 2739 9.125026 ACTGATTGATTTTGTTTAGAACAGACT 57.875 29.630 0.00 0.00 43.27 3.24
714 2744 8.958119 TGATTTTGTTTAGAACAGACTACACT 57.042 30.769 0.00 0.00 43.27 3.55
769 2799 2.525877 GGCTAGGCCCGGTCCATA 60.526 66.667 3.37 0.00 44.06 2.74
867 2897 4.640690 ACCGCTCCCCACTCCACT 62.641 66.667 0.00 0.00 0.00 4.00
868 2898 3.775654 CCGCTCCCCACTCCACTC 61.776 72.222 0.00 0.00 0.00 3.51
869 2899 3.775654 CGCTCCCCACTCCACTCC 61.776 72.222 0.00 0.00 0.00 3.85
870 2900 2.607750 GCTCCCCACTCCACTCCA 60.608 66.667 0.00 0.00 0.00 3.86
871 2901 2.960688 GCTCCCCACTCCACTCCAC 61.961 68.421 0.00 0.00 0.00 4.02
913 2943 3.686045 CGGAGGATAGCTCCCCGC 61.686 72.222 8.34 4.72 43.64 6.13
914 2944 2.524394 GGAGGATAGCTCCCCGCA 60.524 66.667 9.57 0.00 43.21 5.69
915 2945 2.737830 GAGGATAGCTCCCCGCAC 59.262 66.667 0.00 0.00 43.21 5.34
916 2946 2.844839 AGGATAGCTCCCCGCACC 60.845 66.667 0.00 0.00 43.21 5.01
990 3028 1.457643 CTATCCCCGACCAGGAGCA 60.458 63.158 0.00 0.00 45.00 4.26
991 3029 1.457643 TATCCCCGACCAGGAGCAG 60.458 63.158 0.00 0.00 45.00 4.24
992 3030 1.944896 TATCCCCGACCAGGAGCAGA 61.945 60.000 0.00 0.00 45.00 4.26
993 3031 3.465403 CCCCGACCAGGAGCAGAG 61.465 72.222 0.00 0.00 45.00 3.35
994 3032 4.154347 CCCGACCAGGAGCAGAGC 62.154 72.222 0.00 0.00 45.00 4.09
1603 3641 3.387050 GGACACTTACCGGATATGGAAGT 59.613 47.826 9.46 4.66 32.91 3.01
1692 3730 2.814336 CCACTCTTTCCTCTTTTTCGGG 59.186 50.000 0.00 0.00 0.00 5.14
1782 3820 4.794241 GTGCATGACGCGTTCGCC 62.794 66.667 15.53 0.00 46.97 5.54
2496 4534 2.739379 GTTCAGTCTACTTTGCTGCTCC 59.261 50.000 0.00 0.00 0.00 4.70
2634 4672 4.202151 GGTGAAGGAGCAATTTCAACACTT 60.202 41.667 7.11 0.00 31.83 3.16
2832 4913 3.853475 CAGGCAATTTCCAGGTTTGATC 58.147 45.455 0.00 0.00 0.00 2.92
2844 4925 3.445096 CAGGTTTGATCAATGGGGAGTTC 59.555 47.826 9.40 0.00 0.00 3.01
2852 4933 5.363868 TGATCAATGGGGAGTTCAGTAGTAG 59.636 44.000 0.00 0.00 0.00 2.57
2854 4935 5.529289 TCAATGGGGAGTTCAGTAGTAGAT 58.471 41.667 0.00 0.00 0.00 1.98
2856 4937 3.031736 TGGGGAGTTCAGTAGTAGATGC 58.968 50.000 0.00 0.00 0.00 3.91
2858 4939 3.181474 GGGGAGTTCAGTAGTAGATGCAC 60.181 52.174 0.00 0.00 0.00 4.57
2859 4940 3.702045 GGGAGTTCAGTAGTAGATGCACT 59.298 47.826 0.00 0.00 0.00 4.40
2861 4942 5.536916 GGGAGTTCAGTAGTAGATGCACTAT 59.463 44.000 0.00 0.00 33.71 2.12
2864 4945 8.630917 GGAGTTCAGTAGTAGATGCACTATTAA 58.369 37.037 0.00 0.00 33.71 1.40
2886 4967 3.180891 GTAGATGCACTACCACTTCCC 57.819 52.381 12.68 0.00 43.90 3.97
2887 4968 0.912486 AGATGCACTACCACTTCCCC 59.088 55.000 0.00 0.00 0.00 4.81
2900 4981 4.777366 ACCACTTCCCCAAATATCCTTTTG 59.223 41.667 0.00 0.00 36.55 2.44
2903 4984 4.711846 ACTTCCCCAAATATCCTTTTGCTC 59.288 41.667 0.00 0.00 35.67 4.26
2904 4985 3.642141 TCCCCAAATATCCTTTTGCTCC 58.358 45.455 0.00 0.00 35.67 4.70
2909 4990 6.239402 CCCCAAATATCCTTTTGCTCCATTAG 60.239 42.308 0.00 0.00 35.67 1.73
2934 5018 5.051173 CGTGTTCTGAAGACTATGCATCATC 60.051 44.000 14.66 1.68 0.00 2.92
2950 5034 5.163652 TGCATCATCTTGCTTCTGAAGAATG 60.164 40.000 21.06 12.67 43.18 2.67
2956 5040 6.187125 TCTTGCTTCTGAAGAATGTATTGC 57.813 37.500 21.06 3.75 33.01 3.56
2958 5042 5.808042 TGCTTCTGAAGAATGTATTGCTC 57.192 39.130 21.06 0.00 33.01 4.26
2969 5053 5.238432 AGAATGTATTGCTCGAAACACACAA 59.762 36.000 6.06 0.00 0.00 3.33
2970 5054 5.627499 ATGTATTGCTCGAAACACACAAT 57.373 34.783 6.06 0.00 35.31 2.71
2976 5060 3.058293 TGCTCGAAACACACAATGGATTC 60.058 43.478 0.00 0.00 0.00 2.52
2978 5062 2.482336 TCGAAACACACAATGGATTCGG 59.518 45.455 13.48 1.56 44.94 4.30
2982 5067 0.179192 CACACAATGGATTCGGTGCG 60.179 55.000 0.00 0.00 34.69 5.34
2984 5069 1.377202 ACAATGGATTCGGTGCGCT 60.377 52.632 9.73 0.00 0.00 5.92
2985 5070 1.063006 CAATGGATTCGGTGCGCTG 59.937 57.895 9.73 0.00 0.00 5.18
2990 5075 1.595382 GATTCGGTGCGCTGCCTAT 60.595 57.895 9.73 7.29 0.00 2.57
3026 5124 6.630444 AAGAATTAGTTGGATGCAGCTATG 57.370 37.500 11.42 0.00 0.00 2.23
3039 5137 2.896685 GCAGCTATGGACTAGAGATGGT 59.103 50.000 0.00 0.00 34.71 3.55
3051 5149 7.038302 TGGACTAGAGATGGTGTAATTCAGTTT 60.038 37.037 0.00 0.00 0.00 2.66
3055 5153 4.666512 AGATGGTGTAATTCAGTTTGGCT 58.333 39.130 0.00 0.00 0.00 4.75
3057 5155 6.245408 AGATGGTGTAATTCAGTTTGGCTAA 58.755 36.000 0.00 0.00 0.00 3.09
3058 5156 5.699097 TGGTGTAATTCAGTTTGGCTAAC 57.301 39.130 3.52 3.52 36.99 2.34
3075 5173 3.001736 GCTAACTGATGATTCTCGGTTGC 59.998 47.826 15.05 13.08 43.06 4.17
3080 5178 2.866156 TGATGATTCTCGGTTGCGATTC 59.134 45.455 0.00 0.00 0.00 2.52
3388 5502 2.353406 CGACTACACCTGGGTAAACCTG 60.353 54.545 0.00 0.00 41.11 4.00
3456 5573 1.163554 GGCAAGAGCAAAGAGACCTG 58.836 55.000 0.00 0.00 44.61 4.00
3462 5579 5.300752 CAAGAGCAAAGAGACCTGACTAAA 58.699 41.667 0.00 0.00 0.00 1.85
3471 5588 6.762702 AGAGACCTGACTAAACTAACTAGC 57.237 41.667 0.00 0.00 0.00 3.42
3475 5592 4.082354 ACCTGACTAAACTAACTAGCGGTG 60.082 45.833 0.00 0.00 0.00 4.94
3483 5600 2.688958 ACTAACTAGCGGTGTCATCCTC 59.311 50.000 0.00 0.00 0.00 3.71
3551 5672 2.088104 ATTACCGAGCATCTGGGAGA 57.912 50.000 1.86 0.00 33.49 3.71
3603 5728 0.179094 TCGTGACAAAGAACTGCGGT 60.179 50.000 0.00 0.00 0.00 5.68
3641 5766 7.064728 GCTAGTGTGGAACCTCTTATGTTTTAG 59.935 40.741 0.00 0.00 34.36 1.85
3842 5975 5.560966 ACGTCTGTTGTGTTTGAGAATTT 57.439 34.783 0.00 0.00 0.00 1.82
3886 6019 1.548081 CAAGCACAATGTGGGATCCA 58.452 50.000 15.78 0.00 33.64 3.41
3887 6020 1.475280 CAAGCACAATGTGGGATCCAG 59.525 52.381 15.78 0.00 32.34 3.86
3888 6021 0.033796 AGCACAATGTGGGATCCAGG 60.034 55.000 15.78 0.00 32.34 4.45
3889 6022 0.034186 GCACAATGTGGGATCCAGGA 60.034 55.000 15.78 0.00 32.34 3.86
3890 6023 1.410648 GCACAATGTGGGATCCAGGAT 60.411 52.381 15.78 0.00 32.34 3.24
3891 6024 2.579873 CACAATGTGGGATCCAGGATC 58.420 52.381 20.24 20.24 38.25 3.36
3973 6108 7.201767 GGATCGATGAGTTCAATGGATCTTTTT 60.202 37.037 0.54 0.00 33.87 1.94
4065 7095 3.471680 GATTAGCAGGTGAGACCCATTC 58.528 50.000 0.00 0.00 39.75 2.67
4112 7142 0.409092 TCACAAAGCATCCACCCCAT 59.591 50.000 0.00 0.00 0.00 4.00
4116 7146 1.224003 AAAGCATCCACCCCATCCCT 61.224 55.000 0.00 0.00 0.00 4.20
4119 7149 1.723128 GCATCCACCCCATCCCTCAT 61.723 60.000 0.00 0.00 0.00 2.90
4129 7159 3.498121 CCCCATCCCTCATCTGAAATCAG 60.498 52.174 3.99 3.99 45.08 2.90
4161 7191 9.661187 GAGAGATTATATGCTTTGTGATTTGTG 57.339 33.333 0.00 0.00 0.00 3.33
4168 7198 3.181468 TGCTTTGTGATTTGTGAATGCCA 60.181 39.130 0.00 0.00 0.00 4.92
4184 7214 0.666913 GCCACATGTCATCCATCAGC 59.333 55.000 0.00 0.00 0.00 4.26
4196 7226 1.593787 CATCAGCACGGGTCTCACT 59.406 57.895 0.00 0.00 0.00 3.41
4296 7328 0.743701 CAGAGAGATGGCTGGCACAC 60.744 60.000 5.88 4.03 0.00 3.82
4309 7341 0.883833 GGCACACACATTCCTTCCTG 59.116 55.000 0.00 0.00 0.00 3.86
4310 7342 1.609208 GCACACACATTCCTTCCTGT 58.391 50.000 0.00 0.00 0.00 4.00
4311 7343 1.956477 GCACACACATTCCTTCCTGTT 59.044 47.619 0.00 0.00 0.00 3.16
4312 7344 2.362077 GCACACACATTCCTTCCTGTTT 59.638 45.455 0.00 0.00 0.00 2.83
4313 7345 3.550842 GCACACACATTCCTTCCTGTTTC 60.551 47.826 0.00 0.00 0.00 2.78
4314 7346 3.631686 CACACACATTCCTTCCTGTTTCA 59.368 43.478 0.00 0.00 0.00 2.69
4315 7347 3.885297 ACACACATTCCTTCCTGTTTCAG 59.115 43.478 0.00 0.00 0.00 3.02
4316 7348 2.887152 ACACATTCCTTCCTGTTTCAGC 59.113 45.455 0.00 0.00 0.00 4.26
4317 7349 3.152341 CACATTCCTTCCTGTTTCAGCT 58.848 45.455 0.00 0.00 0.00 4.24
4318 7350 4.202461 ACACATTCCTTCCTGTTTCAGCTA 60.202 41.667 0.00 0.00 0.00 3.32
4319 7351 4.946157 CACATTCCTTCCTGTTTCAGCTAT 59.054 41.667 0.00 0.00 0.00 2.97
4320 7352 4.946157 ACATTCCTTCCTGTTTCAGCTATG 59.054 41.667 0.00 0.00 0.00 2.23
4321 7353 4.640771 TTCCTTCCTGTTTCAGCTATGT 57.359 40.909 0.00 0.00 0.00 2.29
4322 7354 5.755409 TTCCTTCCTGTTTCAGCTATGTA 57.245 39.130 0.00 0.00 0.00 2.29
4323 7355 5.086104 TCCTTCCTGTTTCAGCTATGTAC 57.914 43.478 0.00 0.00 0.00 2.90
4324 7356 4.530553 TCCTTCCTGTTTCAGCTATGTACA 59.469 41.667 0.00 0.00 0.00 2.90
4325 7357 5.012664 TCCTTCCTGTTTCAGCTATGTACAA 59.987 40.000 0.00 0.00 0.00 2.41
4326 7358 5.705441 CCTTCCTGTTTCAGCTATGTACAAA 59.295 40.000 0.00 0.00 0.00 2.83
4327 7359 6.348540 CCTTCCTGTTTCAGCTATGTACAAAC 60.349 42.308 0.00 0.00 0.00 2.93
4328 7360 4.688879 TCCTGTTTCAGCTATGTACAAACG 59.311 41.667 0.00 0.00 30.92 3.60
4329 7361 4.688879 CCTGTTTCAGCTATGTACAAACGA 59.311 41.667 0.00 0.00 30.92 3.85
4330 7362 5.163953 CCTGTTTCAGCTATGTACAAACGAG 60.164 44.000 0.00 0.00 30.92 4.18
4331 7363 4.688879 TGTTTCAGCTATGTACAAACGAGG 59.311 41.667 0.00 0.00 30.92 4.63
4332 7364 4.794278 TTCAGCTATGTACAAACGAGGA 57.206 40.909 0.00 0.00 0.00 3.71
4333 7365 4.794278 TCAGCTATGTACAAACGAGGAA 57.206 40.909 0.00 0.00 0.00 3.36
4334 7366 5.142061 TCAGCTATGTACAAACGAGGAAA 57.858 39.130 0.00 0.00 0.00 3.13
4335 7367 5.730550 TCAGCTATGTACAAACGAGGAAAT 58.269 37.500 0.00 0.00 0.00 2.17
4336 7368 6.869695 TCAGCTATGTACAAACGAGGAAATA 58.130 36.000 0.00 0.00 0.00 1.40
4337 7369 7.497595 TCAGCTATGTACAAACGAGGAAATAT 58.502 34.615 0.00 0.00 0.00 1.28
4338 7370 8.635328 TCAGCTATGTACAAACGAGGAAATATA 58.365 33.333 0.00 0.00 0.00 0.86
4339 7371 9.256477 CAGCTATGTACAAACGAGGAAATATAA 57.744 33.333 0.00 0.00 0.00 0.98
4340 7372 9.477484 AGCTATGTACAAACGAGGAAATATAAG 57.523 33.333 0.00 0.00 0.00 1.73
4341 7373 8.709646 GCTATGTACAAACGAGGAAATATAAGG 58.290 37.037 0.00 0.00 0.00 2.69
4342 7374 9.760077 CTATGTACAAACGAGGAAATATAAGGT 57.240 33.333 0.00 0.00 0.00 3.50
4344 7376 8.931385 TGTACAAACGAGGAAATATAAGGTAC 57.069 34.615 0.00 0.00 0.00 3.34
4345 7377 8.530311 TGTACAAACGAGGAAATATAAGGTACA 58.470 33.333 0.00 0.00 35.30 2.90
4346 7378 9.369904 GTACAAACGAGGAAATATAAGGTACAA 57.630 33.333 0.00 0.00 0.00 2.41
4348 7380 8.889717 ACAAACGAGGAAATATAAGGTACAATG 58.110 33.333 0.00 0.00 0.00 2.82
4349 7381 7.492352 AACGAGGAAATATAAGGTACAATGC 57.508 36.000 0.00 0.00 0.00 3.56
4350 7382 6.588204 ACGAGGAAATATAAGGTACAATGCA 58.412 36.000 0.00 0.00 0.00 3.96
4351 7383 7.224297 ACGAGGAAATATAAGGTACAATGCAT 58.776 34.615 0.00 0.00 0.00 3.96
4352 7384 7.173218 ACGAGGAAATATAAGGTACAATGCATG 59.827 37.037 0.00 0.00 0.00 4.06
4353 7385 7.219484 AGGAAATATAAGGTACAATGCATGC 57.781 36.000 11.82 11.82 0.00 4.06
4354 7386 7.006509 AGGAAATATAAGGTACAATGCATGCT 58.993 34.615 20.33 0.00 0.00 3.79
4355 7387 7.175641 AGGAAATATAAGGTACAATGCATGCTC 59.824 37.037 20.33 1.07 0.00 4.26
4356 7388 6.824305 AATATAAGGTACAATGCATGCTCC 57.176 37.500 20.33 11.08 0.00 4.70
4357 7389 2.512692 AAGGTACAATGCATGCTCCA 57.487 45.000 20.33 0.00 0.00 3.86
4358 7390 2.512692 AGGTACAATGCATGCTCCAA 57.487 45.000 20.33 0.00 0.00 3.53
4359 7391 2.094675 AGGTACAATGCATGCTCCAAC 58.905 47.619 20.33 10.31 0.00 3.77
4360 7392 2.094675 GGTACAATGCATGCTCCAACT 58.905 47.619 20.33 0.00 0.00 3.16
4361 7393 2.493278 GGTACAATGCATGCTCCAACTT 59.507 45.455 20.33 0.14 0.00 2.66
4362 7394 3.056607 GGTACAATGCATGCTCCAACTTT 60.057 43.478 20.33 0.00 0.00 2.66
4363 7395 3.034721 ACAATGCATGCTCCAACTTTG 57.965 42.857 20.33 12.46 0.00 2.77
4364 7396 2.629137 ACAATGCATGCTCCAACTTTGA 59.371 40.909 20.33 0.00 0.00 2.69
4365 7397 3.259876 ACAATGCATGCTCCAACTTTGAT 59.740 39.130 20.33 0.00 0.00 2.57
4366 7398 4.463539 ACAATGCATGCTCCAACTTTGATA 59.536 37.500 20.33 0.00 0.00 2.15
4367 7399 5.047164 ACAATGCATGCTCCAACTTTGATAA 60.047 36.000 20.33 0.00 0.00 1.75
4368 7400 5.664294 ATGCATGCTCCAACTTTGATAAA 57.336 34.783 20.33 0.00 0.00 1.40
4369 7401 5.465532 TGCATGCTCCAACTTTGATAAAA 57.534 34.783 20.33 0.00 0.00 1.52
4370 7402 5.229423 TGCATGCTCCAACTTTGATAAAAC 58.771 37.500 20.33 0.00 0.00 2.43
4371 7403 5.221402 TGCATGCTCCAACTTTGATAAAACA 60.221 36.000 20.33 0.00 0.00 2.83
4372 7404 5.695816 GCATGCTCCAACTTTGATAAAACAA 59.304 36.000 11.37 0.00 0.00 2.83
4373 7405 6.202570 GCATGCTCCAACTTTGATAAAACAAA 59.797 34.615 11.37 0.00 37.98 2.83
4374 7406 7.095102 GCATGCTCCAACTTTGATAAAACAAAT 60.095 33.333 11.37 0.00 38.73 2.32
4375 7407 8.776470 CATGCTCCAACTTTGATAAAACAAATT 58.224 29.630 0.00 0.00 38.73 1.82
4376 7408 8.140677 TGCTCCAACTTTGATAAAACAAATTG 57.859 30.769 0.00 0.00 38.73 2.32
4377 7409 7.768120 TGCTCCAACTTTGATAAAACAAATTGT 59.232 29.630 0.00 0.00 38.73 2.71
4378 7410 9.255304 GCTCCAACTTTGATAAAACAAATTGTA 57.745 29.630 0.00 0.00 38.73 2.41
4381 7413 9.842444 CCAACTTTGATAAAACAAATTGTAACG 57.158 29.630 0.00 0.00 38.73 3.18
4392 7424 9.800299 AAAACAAATTGTAACGTTTCAAGAAAC 57.200 25.926 22.11 14.13 45.25 2.78
4393 7425 7.514573 ACAAATTGTAACGTTTCAAGAAACC 57.485 32.000 22.11 6.45 45.78 3.27
4394 7426 6.251801 ACAAATTGTAACGTTTCAAGAAACCG 59.748 34.615 22.11 14.64 45.78 4.44
4395 7427 3.322230 TGTAACGTTTCAAGAAACCGC 57.678 42.857 17.32 7.82 45.78 5.68
4396 7428 2.676839 TGTAACGTTTCAAGAAACCGCA 59.323 40.909 17.32 9.77 45.78 5.69
4397 7429 2.182904 AACGTTTCAAGAAACCGCAC 57.817 45.000 17.32 0.00 45.78 5.34
4398 7430 1.375551 ACGTTTCAAGAAACCGCACT 58.624 45.000 17.32 0.00 45.78 4.40
4399 7431 2.553086 ACGTTTCAAGAAACCGCACTA 58.447 42.857 17.32 0.00 45.78 2.74
4400 7432 3.135994 ACGTTTCAAGAAACCGCACTAT 58.864 40.909 17.32 0.00 45.78 2.12
4401 7433 3.562557 ACGTTTCAAGAAACCGCACTATT 59.437 39.130 17.32 0.00 45.78 1.73
4402 7434 4.148891 CGTTTCAAGAAACCGCACTATTC 58.851 43.478 17.32 0.00 45.78 1.75
4403 7435 4.319190 CGTTTCAAGAAACCGCACTATTCA 60.319 41.667 17.32 0.00 45.78 2.57
4404 7436 5.616866 CGTTTCAAGAAACCGCACTATTCAT 60.617 40.000 17.32 0.00 45.78 2.57
4405 7437 6.401688 CGTTTCAAGAAACCGCACTATTCATA 60.402 38.462 17.32 0.00 45.78 2.15
4406 7438 7.472543 GTTTCAAGAAACCGCACTATTCATAT 58.527 34.615 13.34 0.00 43.52 1.78
4407 7439 6.844696 TCAAGAAACCGCACTATTCATATC 57.155 37.500 0.00 0.00 0.00 1.63
4408 7440 6.582636 TCAAGAAACCGCACTATTCATATCT 58.417 36.000 0.00 0.00 0.00 1.98
4409 7441 7.722363 TCAAGAAACCGCACTATTCATATCTA 58.278 34.615 0.00 0.00 0.00 1.98
4410 7442 7.867909 TCAAGAAACCGCACTATTCATATCTAG 59.132 37.037 0.00 0.00 0.00 2.43
4411 7443 7.526142 AGAAACCGCACTATTCATATCTAGA 57.474 36.000 0.00 0.00 0.00 2.43
4412 7444 8.128322 AGAAACCGCACTATTCATATCTAGAT 57.872 34.615 10.73 10.73 0.00 1.98
4413 7445 8.589338 AGAAACCGCACTATTCATATCTAGATT 58.411 33.333 11.25 0.00 0.00 2.40
4414 7446 9.209175 GAAACCGCACTATTCATATCTAGATTT 57.791 33.333 11.25 0.00 0.00 2.17
4415 7447 9.561069 AAACCGCACTATTCATATCTAGATTTT 57.439 29.630 11.25 0.00 0.00 1.82
4416 7448 9.561069 AACCGCACTATTCATATCTAGATTTTT 57.439 29.630 11.25 0.00 0.00 1.94
4442 7474 7.985634 TTCTCCATCGCTATTTTAAATTTGC 57.014 32.000 0.00 6.49 0.00 3.68
4443 7475 7.094508 TCTCCATCGCTATTTTAAATTTGCA 57.905 32.000 13.99 0.00 0.00 4.08
4444 7476 7.715657 TCTCCATCGCTATTTTAAATTTGCAT 58.284 30.769 13.99 6.53 0.00 3.96
4445 7477 7.648908 TCTCCATCGCTATTTTAAATTTGCATG 59.351 33.333 13.99 14.16 0.00 4.06
4446 7478 7.487484 TCCATCGCTATTTTAAATTTGCATGA 58.513 30.769 18.36 10.54 0.00 3.07
4447 7479 7.648908 TCCATCGCTATTTTAAATTTGCATGAG 59.351 33.333 18.36 13.20 0.00 2.90
4448 7480 7.436080 CCATCGCTATTTTAAATTTGCATGAGT 59.564 33.333 18.36 0.00 0.00 3.41
4449 7481 8.810427 CATCGCTATTTTAAATTTGCATGAGTT 58.190 29.630 13.99 0.00 0.00 3.01
4450 7482 8.755696 TCGCTATTTTAAATTTGCATGAGTTT 57.244 26.923 13.99 0.00 0.00 2.66
4451 7483 9.202273 TCGCTATTTTAAATTTGCATGAGTTTT 57.798 25.926 13.99 0.00 0.00 2.43
4452 7484 9.810231 CGCTATTTTAAATTTGCATGAGTTTTT 57.190 25.926 13.99 0.00 0.00 1.94
4457 7489 9.838339 TTTTAAATTTGCATGAGTTTTTAGGGA 57.162 25.926 0.00 0.00 0.00 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 3.222855 CTTGTGGCCGCCCAAACA 61.223 61.111 15.15 1.44 44.33 2.83
65 66 3.557228 TTTTTGCAAATCCAGCCTTGT 57.443 38.095 13.65 0.00 0.00 3.16
85 86 7.148407 CGCTTCCATACACACTTCTTCTTTATT 60.148 37.037 0.00 0.00 0.00 1.40
88 89 4.452455 CGCTTCCATACACACTTCTTCTTT 59.548 41.667 0.00 0.00 0.00 2.52
90 91 3.589988 CGCTTCCATACACACTTCTTCT 58.410 45.455 0.00 0.00 0.00 2.85
92 93 2.076863 GCGCTTCCATACACACTTCTT 58.923 47.619 0.00 0.00 0.00 2.52
93 94 1.001974 TGCGCTTCCATACACACTTCT 59.998 47.619 9.73 0.00 0.00 2.85
94 95 1.394917 CTGCGCTTCCATACACACTTC 59.605 52.381 9.73 0.00 0.00 3.01
99 138 1.756375 CGAGCTGCGCTTCCATACAC 61.756 60.000 9.73 0.00 39.88 2.90
144 183 4.602995 TGTTGTAAGCGGAAATTGTTGTC 58.397 39.130 0.00 0.00 0.00 3.18
155 194 3.896648 AGACAATGTTGTTGTAAGCGG 57.103 42.857 0.00 0.00 42.43 5.52
159 198 7.175990 GGGATCCTAAAGACAATGTTGTTGTAA 59.824 37.037 12.58 0.00 42.43 2.41
162 201 5.476599 TGGGATCCTAAAGACAATGTTGTTG 59.523 40.000 12.58 0.00 42.43 3.33
169 208 6.973642 TGAGATTTGGGATCCTAAAGACAAT 58.026 36.000 25.21 10.82 0.00 2.71
172 211 7.888250 ATTTGAGATTTGGGATCCTAAAGAC 57.112 36.000 25.21 20.60 0.00 3.01
178 217 5.659849 AGCTATTTGAGATTTGGGATCCT 57.340 39.130 12.58 0.00 0.00 3.24
179 218 6.073003 CGTTAGCTATTTGAGATTTGGGATCC 60.073 42.308 1.92 1.92 0.00 3.36
181 220 6.591935 TCGTTAGCTATTTGAGATTTGGGAT 58.408 36.000 0.00 0.00 0.00 3.85
182 221 5.984725 TCGTTAGCTATTTGAGATTTGGGA 58.015 37.500 0.00 0.00 0.00 4.37
183 222 6.677781 TTCGTTAGCTATTTGAGATTTGGG 57.322 37.500 0.00 0.00 0.00 4.12
184 223 7.697691 ACATTCGTTAGCTATTTGAGATTTGG 58.302 34.615 0.00 0.00 0.00 3.28
185 224 9.559958 AAACATTCGTTAGCTATTTGAGATTTG 57.440 29.630 0.00 0.00 33.99 2.32
186 225 9.559958 CAAACATTCGTTAGCTATTTGAGATTT 57.440 29.630 7.62 0.00 33.99 2.17
187 226 8.730680 ACAAACATTCGTTAGCTATTTGAGATT 58.269 29.630 16.65 0.00 33.99 2.40
191 1932 7.866729 TCAACAAACATTCGTTAGCTATTTGA 58.133 30.769 16.65 3.95 33.99 2.69
200 1941 6.128391 GCATACCTCTCAACAAACATTCGTTA 60.128 38.462 0.00 0.00 33.99 3.18
211 1952 2.754552 GCAAATGGCATACCTCTCAACA 59.245 45.455 0.00 0.00 43.97 3.33
221 1962 7.038048 TCATAAAAATGTTCGCAAATGGCATA 58.962 30.769 0.00 0.00 45.17 3.14
239 1980 9.383519 AGTCGCTCTGAAGAATTTATCATAAAA 57.616 29.630 0.00 0.00 0.00 1.52
246 1987 4.333926 GCCAAGTCGCTCTGAAGAATTTAT 59.666 41.667 0.00 0.00 0.00 1.40
257 1998 1.550524 TCAACATAGCCAAGTCGCTCT 59.449 47.619 0.00 0.00 40.39 4.09
287 2039 8.710835 ATTTTCAAGTGAACACCGTAAATTTT 57.289 26.923 0.00 0.00 33.13 1.82
293 2045 5.517054 GCAAAATTTTCAAGTGAACACCGTA 59.483 36.000 0.00 0.00 33.13 4.02
294 2046 4.328712 GCAAAATTTTCAAGTGAACACCGT 59.671 37.500 0.00 0.00 33.13 4.83
296 2048 4.633565 TGGCAAAATTTTCAAGTGAACACC 59.366 37.500 0.00 0.00 33.13 4.16
300 2052 6.998968 AACATGGCAAAATTTTCAAGTGAA 57.001 29.167 0.00 0.00 0.00 3.18
315 2067 4.483090 TGTTGCGGTAACATGGCA 57.517 50.000 7.59 0.00 44.07 4.92
324 2076 0.241749 CACAGCATTCATGTTGCGGT 59.758 50.000 17.89 17.89 46.98 5.68
347 2101 0.896923 ATGCATGCCAAAACGGATGT 59.103 45.000 16.68 0.00 36.56 3.06
351 2105 0.179129 GGAGATGCATGCCAAAACGG 60.179 55.000 16.68 0.00 38.11 4.44
359 2113 0.524816 CGTTTGCTGGAGATGCATGC 60.525 55.000 11.82 11.82 40.34 4.06
370 2124 0.440758 TATTCCGCGAACGTTTGCTG 59.559 50.000 31.98 27.07 37.70 4.41
374 2128 1.729284 ATGGTATTCCGCGAACGTTT 58.271 45.000 8.23 0.00 37.70 3.60
380 2134 2.839975 TGCAATAATGGTATTCCGCGA 58.160 42.857 8.23 0.00 36.30 5.87
382 2136 5.376854 AAGATGCAATAATGGTATTCCGC 57.623 39.130 0.00 0.00 36.30 5.54
415 2169 9.778993 GCGTCCGTTAAAGATATAGTAATGATA 57.221 33.333 0.00 0.00 0.00 2.15
416 2170 8.521176 AGCGTCCGTTAAAGATATAGTAATGAT 58.479 33.333 0.00 0.00 0.00 2.45
417 2171 7.879070 AGCGTCCGTTAAAGATATAGTAATGA 58.121 34.615 0.00 0.00 0.00 2.57
418 2172 9.616634 TTAGCGTCCGTTAAAGATATAGTAATG 57.383 33.333 0.00 0.00 0.00 1.90
420 2174 9.616634 CATTAGCGTCCGTTAAAGATATAGTAA 57.383 33.333 0.27 0.00 0.00 2.24
421 2175 7.752239 GCATTAGCGTCCGTTAAAGATATAGTA 59.248 37.037 0.27 0.00 0.00 1.82
422 2176 6.585322 GCATTAGCGTCCGTTAAAGATATAGT 59.415 38.462 0.27 0.00 0.00 2.12
423 2177 6.584942 TGCATTAGCGTCCGTTAAAGATATAG 59.415 38.462 0.27 0.00 46.23 1.31
424 2178 6.448852 TGCATTAGCGTCCGTTAAAGATATA 58.551 36.000 0.27 0.00 46.23 0.86
425 2179 5.294356 TGCATTAGCGTCCGTTAAAGATAT 58.706 37.500 0.27 0.00 46.23 1.63
426 2180 4.684877 TGCATTAGCGTCCGTTAAAGATA 58.315 39.130 0.27 0.00 46.23 1.98
427 2181 3.527533 TGCATTAGCGTCCGTTAAAGAT 58.472 40.909 0.27 0.00 46.23 2.40
428 2182 2.927477 CTGCATTAGCGTCCGTTAAAGA 59.073 45.455 0.27 0.00 46.23 2.52
429 2183 2.927477 TCTGCATTAGCGTCCGTTAAAG 59.073 45.455 0.27 0.00 46.23 1.85
430 2184 2.927477 CTCTGCATTAGCGTCCGTTAAA 59.073 45.455 0.27 0.00 46.23 1.52
431 2185 2.094390 ACTCTGCATTAGCGTCCGTTAA 60.094 45.455 0.00 0.00 46.23 2.01
432 2186 1.475280 ACTCTGCATTAGCGTCCGTTA 59.525 47.619 0.00 0.00 46.23 3.18
433 2187 0.246635 ACTCTGCATTAGCGTCCGTT 59.753 50.000 0.00 0.00 46.23 4.44
434 2188 1.100510 TACTCTGCATTAGCGTCCGT 58.899 50.000 0.00 0.00 46.23 4.69
435 2189 2.423926 ATACTCTGCATTAGCGTCCG 57.576 50.000 0.00 0.00 46.23 4.79
436 2190 4.119862 TGAAATACTCTGCATTAGCGTCC 58.880 43.478 0.00 0.00 46.23 4.79
437 2191 5.718649 TTGAAATACTCTGCATTAGCGTC 57.281 39.130 0.00 0.00 46.23 5.19
438 2192 6.683974 AATTGAAATACTCTGCATTAGCGT 57.316 33.333 0.00 0.00 46.23 5.07
439 2193 9.110617 CAATAATTGAAATACTCTGCATTAGCG 57.889 33.333 0.00 0.00 46.23 4.26
440 2194 8.909671 GCAATAATTGAAATACTCTGCATTAGC 58.090 33.333 0.00 0.00 42.57 3.09
449 2203 7.968405 ACCTGAAACGCAATAATTGAAATACTC 59.032 33.333 0.00 0.00 0.00 2.59
459 2213 3.426159 CGCAAGACCTGAAACGCAATAAT 60.426 43.478 0.00 0.00 43.02 1.28
485 2239 4.827284 CACTCTCCAAATAACCCTTGTGTT 59.173 41.667 0.00 0.00 0.00 3.32
494 2248 5.001232 TGCTACAACCACTCTCCAAATAAC 58.999 41.667 0.00 0.00 0.00 1.89
551 2305 9.829507 AAATATTGTGTGGAATTTGACAGAAAA 57.170 25.926 4.99 0.00 30.10 2.29
552 2306 9.829507 AAAATATTGTGTGGAATTTGACAGAAA 57.170 25.926 4.99 0.00 30.10 2.52
555 2309 8.863049 GCTAAAATATTGTGTGGAATTTGACAG 58.137 33.333 0.00 0.00 0.00 3.51
560 2314 7.826690 ACTCGCTAAAATATTGTGTGGAATTT 58.173 30.769 0.00 0.00 0.00 1.82
565 2319 9.567848 AATAAAACTCGCTAAAATATTGTGTGG 57.432 29.630 0.00 0.00 0.00 4.17
611 2631 6.229936 TGAGTCTAGTACCACAAAACAAGT 57.770 37.500 0.00 0.00 0.00 3.16
612 2632 7.226720 ACAATGAGTCTAGTACCACAAAACAAG 59.773 37.037 0.00 0.00 0.00 3.16
664 2685 8.819974 CAATCAGTGTAGTTTTGCTCAATTTTT 58.180 29.630 0.00 0.00 0.00 1.94
665 2686 8.196771 TCAATCAGTGTAGTTTTGCTCAATTTT 58.803 29.630 0.00 0.00 0.00 1.82
666 2687 7.715657 TCAATCAGTGTAGTTTTGCTCAATTT 58.284 30.769 0.00 0.00 0.00 1.82
671 2692 7.649306 ACAAAATCAATCAGTGTAGTTTTGCTC 59.351 33.333 15.11 0.00 37.93 4.26
672 2693 7.491682 ACAAAATCAATCAGTGTAGTTTTGCT 58.508 30.769 15.11 0.00 37.93 3.91
700 2730 8.753133 TCATCATCAATTAGTGTAGTCTGTTCT 58.247 33.333 0.00 0.00 0.00 3.01
701 2731 8.932945 TCATCATCAATTAGTGTAGTCTGTTC 57.067 34.615 0.00 0.00 0.00 3.18
702 2732 9.322773 CATCATCATCAATTAGTGTAGTCTGTT 57.677 33.333 0.00 0.00 0.00 3.16
704 2734 7.930325 ACCATCATCATCAATTAGTGTAGTCTG 59.070 37.037 0.00 0.00 0.00 3.51
705 2735 8.027524 ACCATCATCATCAATTAGTGTAGTCT 57.972 34.615 0.00 0.00 0.00 3.24
706 2736 9.416794 CTACCATCATCATCAATTAGTGTAGTC 57.583 37.037 0.00 0.00 0.00 2.59
707 2737 8.928448 ACTACCATCATCATCAATTAGTGTAGT 58.072 33.333 0.00 0.00 0.00 2.73
712 2742 9.716531 CATGTACTACCATCATCATCAATTAGT 57.283 33.333 0.00 0.00 0.00 2.24
713 2743 9.933723 TCATGTACTACCATCATCATCAATTAG 57.066 33.333 0.00 0.00 0.00 1.73
716 2746 8.654094 TCTTCATGTACTACCATCATCATCAAT 58.346 33.333 0.00 0.00 0.00 2.57
718 2748 7.069826 TGTCTTCATGTACTACCATCATCATCA 59.930 37.037 0.00 0.00 0.00 3.07
719 2749 7.436933 TGTCTTCATGTACTACCATCATCATC 58.563 38.462 0.00 0.00 0.00 2.92
720 2750 7.365497 TGTCTTCATGTACTACCATCATCAT 57.635 36.000 0.00 0.00 0.00 2.45
721 2751 6.790232 TGTCTTCATGTACTACCATCATCA 57.210 37.500 0.00 0.00 0.00 3.07
722 2752 7.649370 CATGTCTTCATGTACTACCATCATC 57.351 40.000 0.00 0.00 44.37 2.92
769 2799 1.141053 GGTGTCGAGGATGGGCTAAAT 59.859 52.381 0.00 0.00 0.00 1.40
867 2897 3.458163 GCGTGGGGATCGAGTGGA 61.458 66.667 0.00 0.00 0.00 4.02
868 2898 3.770040 TGCGTGGGGATCGAGTGG 61.770 66.667 0.00 0.00 0.00 4.00
869 2899 2.509336 GTGCGTGGGGATCGAGTG 60.509 66.667 0.00 0.00 0.00 3.51
870 2900 4.129737 CGTGCGTGGGGATCGAGT 62.130 66.667 0.00 0.00 0.00 4.18
926 2956 1.258445 TGGGTTCTCTTCCTCGGCTC 61.258 60.000 0.00 0.00 0.00 4.70
990 3028 2.564553 GAACTGACATCGCCCGCTCT 62.565 60.000 0.00 0.00 0.00 4.09
991 3029 2.125512 AACTGACATCGCCCGCTC 60.126 61.111 0.00 0.00 0.00 5.03
992 3030 2.125512 GAACTGACATCGCCCGCT 60.126 61.111 0.00 0.00 0.00 5.52
993 3031 2.434185 TGAACTGACATCGCCCGC 60.434 61.111 0.00 0.00 0.00 6.13
994 3032 1.811266 CCTGAACTGACATCGCCCG 60.811 63.158 0.00 0.00 0.00 6.13
999 3037 2.420687 GGATGGGTCCTGAACTGACATC 60.421 54.545 0.00 0.00 41.60 3.06
1587 3625 1.069513 CCGCACTTCCATATCCGGTAA 59.930 52.381 0.00 0.00 0.00 2.85
1692 3730 3.151022 CCGGCCTCAGTCTCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
1872 3910 4.988716 AGCCACGTGGTCCTCGGA 62.989 66.667 33.92 0.00 37.57 4.55
2556 4594 4.991153 TGTCAAATTTGCACAACCAGTA 57.009 36.364 13.54 0.00 0.00 2.74
2671 4709 5.656416 AGCTAGATAGTCCCAATAGCAGATC 59.344 44.000 0.00 0.00 41.01 2.75
2821 4902 2.291800 ACTCCCCATTGATCAAACCTGG 60.292 50.000 13.09 15.17 0.00 4.45
2832 4913 5.605534 CATCTACTACTGAACTCCCCATTG 58.394 45.833 0.00 0.00 0.00 2.82
2852 4933 7.721286 AGTGCATCTACTTTAATAGTGCATC 57.279 36.000 12.38 8.84 39.32 3.91
2854 4935 6.984474 GGTAGTGCATCTACTTTAATAGTGCA 59.016 38.462 19.22 0.00 45.86 4.57
2856 4937 8.198109 AGTGGTAGTGCATCTACTTTAATAGTG 58.802 37.037 19.22 0.00 45.86 2.74
2858 4939 9.250624 GAAGTGGTAGTGCATCTACTTTAATAG 57.749 37.037 19.22 0.00 45.86 1.73
2859 4940 8.202137 GGAAGTGGTAGTGCATCTACTTTAATA 58.798 37.037 19.22 4.53 45.86 0.98
2861 4942 6.403878 GGAAGTGGTAGTGCATCTACTTTAA 58.596 40.000 19.22 6.85 45.86 1.52
2864 4945 3.197983 GGGAAGTGGTAGTGCATCTACTT 59.802 47.826 19.22 16.83 45.86 2.24
2865 4946 2.766828 GGGAAGTGGTAGTGCATCTACT 59.233 50.000 19.22 11.15 45.86 2.57
2866 4947 2.158943 GGGGAAGTGGTAGTGCATCTAC 60.159 54.545 14.44 14.44 45.87 2.59
2868 4949 0.912486 GGGGAAGTGGTAGTGCATCT 59.088 55.000 0.00 0.00 0.00 2.90
2869 4950 0.618458 TGGGGAAGTGGTAGTGCATC 59.382 55.000 0.00 0.00 0.00 3.91
2878 4959 4.383010 GCAAAAGGATATTTGGGGAAGTGG 60.383 45.833 2.39 0.00 39.99 4.00
2884 4965 3.373830 TGGAGCAAAAGGATATTTGGGG 58.626 45.455 2.39 0.00 39.99 4.96
2903 4984 3.589988 AGTCTTCAGAACACGCTAATGG 58.410 45.455 0.00 0.00 0.00 3.16
2904 4985 5.276584 GCATAGTCTTCAGAACACGCTAATG 60.277 44.000 0.00 0.00 0.00 1.90
2909 4990 2.337583 TGCATAGTCTTCAGAACACGC 58.662 47.619 0.00 0.00 0.00 5.34
2910 4991 4.176271 TGATGCATAGTCTTCAGAACACG 58.824 43.478 0.00 0.00 0.00 4.49
2911 4992 6.047870 AGATGATGCATAGTCTTCAGAACAC 58.952 40.000 0.00 0.00 0.00 3.32
2934 5018 6.192234 AGCAATACATTCTTCAGAAGCAAG 57.808 37.500 5.15 0.00 37.48 4.01
2950 5034 4.083537 TCCATTGTGTGTTTCGAGCAATAC 60.084 41.667 0.00 0.00 0.00 1.89
2956 5040 3.424829 CCGAATCCATTGTGTGTTTCGAG 60.425 47.826 4.60 0.00 40.82 4.04
2958 5042 2.225491 ACCGAATCCATTGTGTGTTTCG 59.775 45.455 0.00 0.00 39.39 3.46
2969 5053 3.204827 GCAGCGCACCGAATCCAT 61.205 61.111 11.47 0.00 0.00 3.41
2990 5075 8.271458 TCCAACTAATTCTTATGACTATTGCCA 58.729 33.333 0.00 0.00 0.00 4.92
2995 5090 9.499479 CTGCATCCAACTAATTCTTATGACTAT 57.501 33.333 0.00 0.00 0.00 2.12
2998 5093 6.261826 AGCTGCATCCAACTAATTCTTATGAC 59.738 38.462 1.02 0.00 0.00 3.06
3026 5124 6.472686 ACTGAATTACACCATCTCTAGTCC 57.527 41.667 0.00 0.00 0.00 3.85
3051 5149 2.766263 ACCGAGAATCATCAGTTAGCCA 59.234 45.455 0.00 0.00 33.17 4.75
3055 5153 3.119280 TCGCAACCGAGAATCATCAGTTA 60.119 43.478 0.00 0.00 38.82 2.24
3057 5155 1.204704 TCGCAACCGAGAATCATCAGT 59.795 47.619 0.00 0.00 38.82 3.41
3058 5156 1.926561 TCGCAACCGAGAATCATCAG 58.073 50.000 0.00 0.00 38.82 2.90
3075 5173 5.752472 AGAGTCATGAATTAGCACTGAATCG 59.248 40.000 0.00 0.00 36.40 3.34
3080 5178 5.410746 ACAACAGAGTCATGAATTAGCACTG 59.589 40.000 0.00 1.89 0.00 3.66
3456 5573 5.051891 TGACACCGCTAGTTAGTTTAGTC 57.948 43.478 0.00 0.00 0.00 2.59
3462 5579 2.688958 GAGGATGACACCGCTAGTTAGT 59.311 50.000 0.00 0.00 34.73 2.24
3471 5588 0.457851 GAGACCAGAGGATGACACCG 59.542 60.000 0.00 0.00 34.73 4.94
3475 5592 3.810310 AAATCGAGACCAGAGGATGAC 57.190 47.619 0.00 0.00 0.00 3.06
3483 5600 2.101582 CTCCCCACTAAATCGAGACCAG 59.898 54.545 0.00 0.00 0.00 4.00
3572 5693 5.175859 TCTTTGTCACGACCCTAAATCATC 58.824 41.667 0.00 0.00 0.00 2.92
3573 5694 5.160607 TCTTTGTCACGACCCTAAATCAT 57.839 39.130 0.00 0.00 0.00 2.45
3574 5695 4.610605 TCTTTGTCACGACCCTAAATCA 57.389 40.909 0.00 0.00 0.00 2.57
3603 5728 3.072330 TCCACACTAGCTGTTTCCAATCA 59.928 43.478 0.00 0.00 0.00 2.57
3641 5766 2.808543 AGAACGGTCAATCAACAAGAGC 59.191 45.455 1.87 0.00 0.00 4.09
3858 5991 0.174845 CATTGTGCTTGGGGATGCAG 59.825 55.000 0.00 0.00 40.06 4.41
3886 6019 2.074922 TTCCAGGGGAAAAGGATCCT 57.925 50.000 9.02 9.02 38.93 3.24
3897 6030 2.093341 CCATCATTTTGCTTTCCAGGGG 60.093 50.000 0.00 0.00 0.00 4.79
3973 6108 1.623311 TCATCCGCACCAGAAAGAGAA 59.377 47.619 0.00 0.00 0.00 2.87
3974 6109 1.266178 TCATCCGCACCAGAAAGAGA 58.734 50.000 0.00 0.00 0.00 3.10
4042 6177 1.204146 GGGTCTCACCTGCTAATCCA 58.796 55.000 0.00 0.00 38.64 3.41
4112 7142 2.130193 CCCCTGATTTCAGATGAGGGA 58.870 52.381 11.52 0.00 46.59 4.20
4144 7174 5.170021 GGCATTCACAAATCACAAAGCATA 58.830 37.500 0.00 0.00 0.00 3.14
4161 7191 2.953648 TGATGGATGACATGTGGCATTC 59.046 45.455 1.15 1.06 45.42 2.67
4168 7198 1.660167 CGTGCTGATGGATGACATGT 58.340 50.000 0.00 0.00 40.72 3.21
4184 7214 2.536761 TAAACCAAGTGAGACCCGTG 57.463 50.000 0.00 0.00 0.00 4.94
4232 7262 2.033448 TGCCCTACAAAGCACGGG 59.967 61.111 0.00 0.00 39.76 5.28
4296 7328 3.152341 AGCTGAAACAGGAAGGAATGTG 58.848 45.455 0.00 0.00 31.21 3.21
4309 7341 4.927425 TCCTCGTTTGTACATAGCTGAAAC 59.073 41.667 0.00 0.00 0.00 2.78
4310 7342 5.142061 TCCTCGTTTGTACATAGCTGAAA 57.858 39.130 0.00 0.00 0.00 2.69
4311 7343 4.794278 TCCTCGTTTGTACATAGCTGAA 57.206 40.909 0.00 0.00 0.00 3.02
4312 7344 4.794278 TTCCTCGTTTGTACATAGCTGA 57.206 40.909 0.00 0.00 0.00 4.26
4313 7345 7.715265 ATATTTCCTCGTTTGTACATAGCTG 57.285 36.000 0.00 0.00 0.00 4.24
4314 7346 9.477484 CTTATATTTCCTCGTTTGTACATAGCT 57.523 33.333 0.00 0.00 0.00 3.32
4315 7347 8.709646 CCTTATATTTCCTCGTTTGTACATAGC 58.290 37.037 0.00 0.00 0.00 2.97
4316 7348 9.760077 ACCTTATATTTCCTCGTTTGTACATAG 57.240 33.333 0.00 0.00 0.00 2.23
4318 7350 9.538508 GTACCTTATATTTCCTCGTTTGTACAT 57.461 33.333 0.00 0.00 0.00 2.29
4319 7351 8.530311 TGTACCTTATATTTCCTCGTTTGTACA 58.470 33.333 0.00 0.00 33.41 2.90
4320 7352 8.931385 TGTACCTTATATTTCCTCGTTTGTAC 57.069 34.615 0.00 0.00 0.00 2.90
4322 7354 8.889717 CATTGTACCTTATATTTCCTCGTTTGT 58.110 33.333 0.00 0.00 0.00 2.83
4323 7355 7.855904 GCATTGTACCTTATATTTCCTCGTTTG 59.144 37.037 0.00 0.00 0.00 2.93
4324 7356 7.554835 TGCATTGTACCTTATATTTCCTCGTTT 59.445 33.333 0.00 0.00 0.00 3.60
4325 7357 7.051623 TGCATTGTACCTTATATTTCCTCGTT 58.948 34.615 0.00 0.00 0.00 3.85
4326 7358 6.588204 TGCATTGTACCTTATATTTCCTCGT 58.412 36.000 0.00 0.00 0.00 4.18
4327 7359 7.521529 CATGCATTGTACCTTATATTTCCTCG 58.478 38.462 0.00 0.00 0.00 4.63
4328 7360 7.175641 AGCATGCATTGTACCTTATATTTCCTC 59.824 37.037 21.98 0.00 0.00 3.71
4329 7361 7.006509 AGCATGCATTGTACCTTATATTTCCT 58.993 34.615 21.98 0.00 0.00 3.36
4330 7362 7.219484 AGCATGCATTGTACCTTATATTTCC 57.781 36.000 21.98 0.00 0.00 3.13
4331 7363 7.040478 TGGAGCATGCATTGTACCTTATATTTC 60.040 37.037 21.98 1.64 0.00 2.17
4332 7364 6.777091 TGGAGCATGCATTGTACCTTATATTT 59.223 34.615 21.98 0.00 0.00 1.40
4333 7365 6.306199 TGGAGCATGCATTGTACCTTATATT 58.694 36.000 21.98 0.00 0.00 1.28
4334 7366 5.879763 TGGAGCATGCATTGTACCTTATAT 58.120 37.500 21.98 0.00 0.00 0.86
4335 7367 5.303259 TGGAGCATGCATTGTACCTTATA 57.697 39.130 21.98 0.00 0.00 0.98
4336 7368 4.169059 TGGAGCATGCATTGTACCTTAT 57.831 40.909 21.98 0.00 0.00 1.73
4337 7369 3.643199 TGGAGCATGCATTGTACCTTA 57.357 42.857 21.98 0.00 0.00 2.69
4338 7370 2.493278 GTTGGAGCATGCATTGTACCTT 59.507 45.455 21.98 0.00 35.22 3.50
4339 7371 2.094675 GTTGGAGCATGCATTGTACCT 58.905 47.619 21.98 0.00 35.22 3.08
4340 7372 2.094675 AGTTGGAGCATGCATTGTACC 58.905 47.619 21.98 12.79 35.22 3.34
4341 7373 3.855689 AAGTTGGAGCATGCATTGTAC 57.144 42.857 21.98 10.80 35.22 2.90
4342 7374 3.825585 TCAAAGTTGGAGCATGCATTGTA 59.174 39.130 21.98 0.00 35.22 2.41
4343 7375 2.629137 TCAAAGTTGGAGCATGCATTGT 59.371 40.909 21.98 0.00 35.22 2.71
4344 7376 3.306917 TCAAAGTTGGAGCATGCATTG 57.693 42.857 21.98 12.20 35.22 2.82
4345 7377 5.664294 TTATCAAAGTTGGAGCATGCATT 57.336 34.783 21.98 0.00 35.22 3.56
4346 7378 5.664294 TTTATCAAAGTTGGAGCATGCAT 57.336 34.783 21.98 4.75 35.22 3.96
4347 7379 5.221402 TGTTTTATCAAAGTTGGAGCATGCA 60.221 36.000 21.98 0.00 30.91 3.96
4348 7380 5.229423 TGTTTTATCAAAGTTGGAGCATGC 58.771 37.500 10.51 10.51 0.00 4.06
4349 7381 7.712264 TTTGTTTTATCAAAGTTGGAGCATG 57.288 32.000 0.00 0.00 34.02 4.06
4350 7382 8.776470 CAATTTGTTTTATCAAAGTTGGAGCAT 58.224 29.630 0.00 0.00 40.00 3.79
4351 7383 7.768120 ACAATTTGTTTTATCAAAGTTGGAGCA 59.232 29.630 0.00 0.00 40.00 4.26
4352 7384 8.141835 ACAATTTGTTTTATCAAAGTTGGAGC 57.858 30.769 0.00 0.00 40.00 4.70
4355 7387 9.842444 CGTTACAATTTGTTTTATCAAAGTTGG 57.158 29.630 7.45 0.00 40.00 3.77
4366 7398 9.800299 GTTTCTTGAAACGTTACAATTTGTTTT 57.200 25.926 7.45 2.13 34.89 2.43
4367 7399 8.436970 GGTTTCTTGAAACGTTACAATTTGTTT 58.563 29.630 16.79 0.00 37.25 2.83
4368 7400 7.201367 CGGTTTCTTGAAACGTTACAATTTGTT 60.201 33.333 16.79 0.00 43.38 2.83
4369 7401 6.251801 CGGTTTCTTGAAACGTTACAATTTGT 59.748 34.615 16.79 7.30 43.38 2.83
4370 7402 6.623633 CGGTTTCTTGAAACGTTACAATTTG 58.376 36.000 16.79 0.00 43.38 2.32
4371 7403 6.799786 CGGTTTCTTGAAACGTTACAATTT 57.200 33.333 16.79 0.00 43.38 1.82
4381 7413 5.103290 TGAATAGTGCGGTTTCTTGAAAC 57.897 39.130 15.53 15.53 0.00 2.78
4382 7414 5.957842 ATGAATAGTGCGGTTTCTTGAAA 57.042 34.783 0.00 0.00 0.00 2.69
4383 7415 7.047891 AGATATGAATAGTGCGGTTTCTTGAA 58.952 34.615 0.00 0.00 0.00 2.69
4384 7416 6.582636 AGATATGAATAGTGCGGTTTCTTGA 58.417 36.000 0.00 0.00 0.00 3.02
4385 7417 6.851222 AGATATGAATAGTGCGGTTTCTTG 57.149 37.500 0.00 0.00 0.00 3.02
4386 7418 7.952671 TCTAGATATGAATAGTGCGGTTTCTT 58.047 34.615 0.00 0.00 0.00 2.52
4387 7419 7.526142 TCTAGATATGAATAGTGCGGTTTCT 57.474 36.000 0.00 0.00 0.00 2.52
4388 7420 8.764524 AATCTAGATATGAATAGTGCGGTTTC 57.235 34.615 5.46 0.00 0.00 2.78
4389 7421 9.561069 AAAATCTAGATATGAATAGTGCGGTTT 57.439 29.630 5.46 0.00 0.00 3.27
4390 7422 9.561069 AAAAATCTAGATATGAATAGTGCGGTT 57.439 29.630 5.46 0.00 0.00 4.44
4416 7448 8.868916 GCAAATTTAAAATAGCGATGGAGAAAA 58.131 29.630 0.00 0.00 0.00 2.29
4417 7449 8.031864 TGCAAATTTAAAATAGCGATGGAGAAA 58.968 29.630 0.00 0.00 0.00 2.52
4418 7450 7.542890 TGCAAATTTAAAATAGCGATGGAGAA 58.457 30.769 0.00 0.00 0.00 2.87
4419 7451 7.094508 TGCAAATTTAAAATAGCGATGGAGA 57.905 32.000 0.00 0.00 0.00 3.71
4420 7452 7.648908 TCATGCAAATTTAAAATAGCGATGGAG 59.351 33.333 0.00 0.00 0.00 3.86
4421 7453 7.487484 TCATGCAAATTTAAAATAGCGATGGA 58.513 30.769 0.00 0.00 0.00 3.41
4422 7454 7.436080 ACTCATGCAAATTTAAAATAGCGATGG 59.564 33.333 0.00 2.27 0.00 3.51
4423 7455 8.343974 ACTCATGCAAATTTAAAATAGCGATG 57.656 30.769 0.00 4.29 0.00 3.84
4424 7456 8.931385 AACTCATGCAAATTTAAAATAGCGAT 57.069 26.923 0.00 0.00 0.00 4.58
4425 7457 8.755696 AAACTCATGCAAATTTAAAATAGCGA 57.244 26.923 0.00 0.00 0.00 4.93
4426 7458 9.810231 AAAAACTCATGCAAATTTAAAATAGCG 57.190 25.926 0.00 0.00 0.00 4.26
4431 7463 9.838339 TCCCTAAAAACTCATGCAAATTTAAAA 57.162 25.926 0.00 0.00 0.00 1.52



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.