Multiple sequence alignment - TraesCS2A01G222100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G222100 chr2A 100.000 2771 0 0 1 2771 213061266 213064036 0.000000e+00 5118
1 TraesCS2A01G222100 chr2A 90.949 453 41 0 2277 2729 144393929 144393477 6.560000e-171 610
2 TraesCS2A01G222100 chr2A 93.714 175 11 0 1 175 367190580 367190754 2.120000e-66 263
3 TraesCS2A01G222100 chr3D 95.303 2278 95 9 1 2273 595728521 595726251 0.000000e+00 3603
4 TraesCS2A01G222100 chr4B 93.443 2318 103 18 1 2300 86484793 86487079 0.000000e+00 3393
5 TraesCS2A01G222100 chr5A 86.771 703 86 6 1135 1831 301419164 301419865 0.000000e+00 776
6 TraesCS2A01G222100 chr4D 86.944 697 83 7 1141 1831 53389341 53388647 0.000000e+00 776
7 TraesCS2A01G222100 chr4A 85.938 704 92 4 1135 1831 439048352 439049055 0.000000e+00 745
8 TraesCS2A01G222100 chr4A 91.818 440 36 0 2288 2727 168415770 168415331 5.070000e-172 614
9 TraesCS2A01G222100 chr7A 85.775 703 93 4 1135 1831 492961392 492960691 0.000000e+00 737
10 TraesCS2A01G222100 chr3B 87.858 593 58 6 471 1052 413561248 413560659 0.000000e+00 684
11 TraesCS2A01G222100 chr3A 91.611 453 38 0 2277 2729 456676949 456676497 6.510000e-176 627
12 TraesCS2A01G222100 chr3A 90.308 454 43 1 2277 2729 452352049 452351596 6.610000e-166 593
13 TraesCS2A01G222100 chr2D 91.228 456 36 2 2277 2729 99773832 99773378 3.920000e-173 617
14 TraesCS2A01G222100 chr5D 90.949 453 41 0 2277 2729 2945226 2945678 6.560000e-171 610
15 TraesCS2A01G222100 chr5D 90.044 452 44 1 2277 2727 450004904 450004453 3.980000e-163 584
16 TraesCS2A01G222100 chr6A 90.508 453 42 1 2277 2729 514506223 514506674 5.110000e-167 597
17 TraesCS2A01G222100 chr1A 90.287 453 43 1 2277 2729 325799918 325799467 2.380000e-165 592
18 TraesCS2A01G222100 chr7B 86.826 167 22 0 1665 1831 353921408 353921242 1.310000e-43 187
19 TraesCS2A01G222100 chr7B 83.832 167 27 0 1665 1831 736861935 736862101 2.860000e-35 159
20 TraesCS2A01G222100 chr1D 83.028 218 23 8 1965 2178 185922610 185922817 4.710000e-43 185
21 TraesCS2A01G222100 chrUn 81.567 217 28 9 1965 2178 74002873 74002666 4.750000e-38 169


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G222100 chr2A 213061266 213064036 2770 False 5118 5118 100.000 1 2771 1 chr2A.!!$F1 2770
1 TraesCS2A01G222100 chr3D 595726251 595728521 2270 True 3603 3603 95.303 1 2273 1 chr3D.!!$R1 2272
2 TraesCS2A01G222100 chr4B 86484793 86487079 2286 False 3393 3393 93.443 1 2300 1 chr4B.!!$F1 2299
3 TraesCS2A01G222100 chr5A 301419164 301419865 701 False 776 776 86.771 1135 1831 1 chr5A.!!$F1 696
4 TraesCS2A01G222100 chr4D 53388647 53389341 694 True 776 776 86.944 1141 1831 1 chr4D.!!$R1 690
5 TraesCS2A01G222100 chr4A 439048352 439049055 703 False 745 745 85.938 1135 1831 1 chr4A.!!$F1 696
6 TraesCS2A01G222100 chr7A 492960691 492961392 701 True 737 737 85.775 1135 1831 1 chr7A.!!$R1 696
7 TraesCS2A01G222100 chr3B 413560659 413561248 589 True 684 684 87.858 471 1052 1 chr3B.!!$R1 581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
367 370 0.250793 ACGCCATGGACCAAATACGA 59.749 50.0 18.4 0.0 0.0 3.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2364 2414 0.030908 GGATGATCGAGGACGTCCAC 59.969 60.0 35.0 27.88 40.64 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 7.234371 TCAGAAAATCTGCTGCCTACTATATCT 59.766 37.037 0.00 0.00 43.95 1.98
82 84 4.900635 AGCAACACTCGTTTCAGATTTT 57.099 36.364 0.00 0.00 31.13 1.82
121 123 4.728102 CCACCGACGGTTGCGCTA 62.728 66.667 19.02 0.00 31.02 4.26
177 180 1.293179 CTCGACCTGCATGGACACA 59.707 57.895 8.91 0.00 39.71 3.72
211 214 3.499918 CGATGGAGAACAACAGAAGCTTT 59.500 43.478 0.00 0.00 0.00 3.51
214 217 5.036117 TGGAGAACAACAGAAGCTTTAGT 57.964 39.130 0.00 0.00 0.00 2.24
234 237 8.918202 TTTAGTGACAACTGAACTTTATCCAT 57.082 30.769 0.00 0.00 37.19 3.41
257 260 4.759693 TGCACGAAGTTGAACTTTATCCAT 59.240 37.500 12.37 0.00 41.61 3.41
267 270 5.547465 TGAACTTTATCCATCGACAACTGT 58.453 37.500 0.00 0.00 0.00 3.55
367 370 0.250793 ACGCCATGGACCAAATACGA 59.749 50.000 18.40 0.00 0.00 3.43
740 755 1.203523 GGTTGTGGTGCAAGTGTTCAA 59.796 47.619 0.00 0.00 37.83 2.69
751 766 3.434984 GCAAGTGTTCAAGATGAGAGGAC 59.565 47.826 0.00 0.00 0.00 3.85
782 797 4.022242 TCACAACCTCTCTGCACTAAGTAC 60.022 45.833 0.00 0.00 0.00 2.73
786 801 3.093057 CCTCTCTGCACTAAGTACCTGT 58.907 50.000 0.00 0.00 0.00 4.00
929 945 2.016704 GAGAGACGCACACCACACG 61.017 63.158 0.00 0.00 0.00 4.49
954 970 3.755628 CGTCGACCGTCCCATGGT 61.756 66.667 11.73 0.00 40.99 3.55
966 982 1.302949 CCATGGTCGTTGGGGTGAT 59.697 57.895 2.57 0.00 0.00 3.06
1025 1041 2.081585 GAAAGGGAAGCTGTGGGGGT 62.082 60.000 0.00 0.00 0.00 4.95
1060 1076 4.636249 ACCATTAGCTAGCTCTGCAATAC 58.364 43.478 23.26 0.00 0.00 1.89
1220 1236 0.395724 GACGGGGATGGCCTGAAAAT 60.396 55.000 3.32 0.00 0.00 1.82
1316 1334 8.064222 CGTTTTCCATACACTCATATTCATGTC 58.936 37.037 0.00 0.00 33.57 3.06
1411 1432 0.168128 CGAATTCCGGCCACTTGAAC 59.832 55.000 2.24 0.00 33.91 3.18
1489 1510 1.612676 GGTTTGGGTTAGTGGTCCAC 58.387 55.000 14.68 14.68 34.10 4.02
1508 1529 1.272781 CTAAGCTCAACGGAGAAGCG 58.727 55.000 0.00 0.00 44.26 4.68
1517 1538 2.410687 CGGAGAAGCGGAGAGAGCA 61.411 63.158 0.00 0.00 37.01 4.26
1676 1707 0.531974 GCACAGACGAGGTTGGACAA 60.532 55.000 0.00 0.00 0.00 3.18
1730 1761 4.091424 CGCATCTCCTTGAAAAATTCGAC 58.909 43.478 0.00 0.00 0.00 4.20
1792 1823 1.899437 CGCAAGTCTCCCTGGCCTTA 61.899 60.000 3.32 0.00 36.71 2.69
2009 2041 4.722700 GGTGACAGCGCCATGGGT 62.723 66.667 15.13 1.84 44.29 4.51
2054 2086 1.258445 GGCAAGGAGACGGAAGGAGA 61.258 60.000 0.00 0.00 0.00 3.71
2093 2125 3.311110 GGAGGTCAGGCGGTCACA 61.311 66.667 0.00 0.00 0.00 3.58
2109 2141 1.383109 ACAGGCGATGGGATCCAGA 60.383 57.895 15.23 0.00 36.75 3.86
2128 2160 2.691252 AGGTTGGGGATCGGGGAC 60.691 66.667 0.00 0.00 0.00 4.46
2147 2179 3.775654 GTGGGAGGAGGAGCGGTG 61.776 72.222 0.00 0.00 0.00 4.94
2185 2217 2.047061 GGGTGGGCTTTTTCCTTCTTT 58.953 47.619 0.00 0.00 0.00 2.52
2212 2244 5.524971 TTCTTTACAGGTTCTGAGTTCGA 57.475 39.130 1.59 0.00 35.18 3.71
2233 2267 0.611714 AACACCTCCGCGGTTTCTAT 59.388 50.000 27.15 6.20 46.37 1.98
2235 2269 1.135721 ACACCTCCGCGGTTTCTATAC 59.864 52.381 27.15 0.00 46.37 1.47
2240 2274 0.249741 CCGCGGTTTCTATACAGGGG 60.250 60.000 19.50 0.00 39.22 4.79
2245 2279 0.468648 GTTTCTATACAGGGGCCGCT 59.531 55.000 18.22 18.22 0.00 5.52
2251 2285 4.101448 ACAGGGGCCGCTGTGATC 62.101 66.667 44.26 8.81 31.95 2.92
2252 2286 3.790437 CAGGGGCCGCTGTGATCT 61.790 66.667 35.34 5.62 0.00 2.75
2317 2367 4.963318 ATATCCTGATCCTCGCAAAAGA 57.037 40.909 0.00 0.00 0.00 2.52
2318 2368 2.386661 TCCTGATCCTCGCAAAAGAC 57.613 50.000 0.00 0.00 0.00 3.01
2319 2369 1.623311 TCCTGATCCTCGCAAAAGACA 59.377 47.619 0.00 0.00 0.00 3.41
2320 2370 2.005451 CCTGATCCTCGCAAAAGACAG 58.995 52.381 0.00 0.00 0.00 3.51
2321 2371 2.005451 CTGATCCTCGCAAAAGACAGG 58.995 52.381 0.00 0.00 0.00 4.00
2322 2372 1.623311 TGATCCTCGCAAAAGACAGGA 59.377 47.619 0.00 0.00 39.42 3.86
2323 2373 2.237143 TGATCCTCGCAAAAGACAGGAT 59.763 45.455 0.00 0.00 46.59 3.24
2324 2374 2.386661 TCCTCGCAAAAGACAGGATC 57.613 50.000 0.00 0.00 29.57 3.36
2325 2375 1.902508 TCCTCGCAAAAGACAGGATCT 59.097 47.619 0.00 0.00 40.46 2.75
2333 2383 1.714794 AAGACAGGATCTTTGTCGCG 58.285 50.000 18.61 0.00 46.05 5.87
2334 2384 1.272490 AAGACAGGATCTTTGTCGCGA 59.728 47.619 3.71 3.71 46.05 5.87
2335 2385 1.927895 GACAGGATCTTTGTCGCGAT 58.072 50.000 14.06 0.00 36.01 4.58
2336 2386 2.271800 GACAGGATCTTTGTCGCGATT 58.728 47.619 14.06 0.00 36.01 3.34
2337 2387 3.444916 GACAGGATCTTTGTCGCGATTA 58.555 45.455 14.06 1.06 36.01 1.75
2338 2388 4.051922 GACAGGATCTTTGTCGCGATTAT 58.948 43.478 14.06 1.36 36.01 1.28
2339 2389 3.804325 ACAGGATCTTTGTCGCGATTATG 59.196 43.478 14.06 6.04 0.00 1.90
2340 2390 4.051237 CAGGATCTTTGTCGCGATTATGA 58.949 43.478 14.06 11.45 0.00 2.15
2341 2391 4.687948 CAGGATCTTTGTCGCGATTATGAT 59.312 41.667 14.06 15.61 0.00 2.45
2342 2392 4.926238 AGGATCTTTGTCGCGATTATGATC 59.074 41.667 24.95 24.95 0.00 2.92
2343 2393 4.092091 GGATCTTTGTCGCGATTATGATCC 59.908 45.833 30.26 30.26 40.92 3.36
2344 2394 4.322080 TCTTTGTCGCGATTATGATCCT 57.678 40.909 14.06 0.00 0.00 3.24
2345 2395 4.299155 TCTTTGTCGCGATTATGATCCTC 58.701 43.478 14.06 0.00 0.00 3.71
2346 2396 2.724977 TGTCGCGATTATGATCCTCC 57.275 50.000 14.06 0.00 0.00 4.30
2347 2397 1.068541 TGTCGCGATTATGATCCTCCG 60.069 52.381 14.06 0.00 0.00 4.63
2348 2398 1.199327 GTCGCGATTATGATCCTCCGA 59.801 52.381 14.06 0.00 0.00 4.55
2349 2399 1.199327 TCGCGATTATGATCCTCCGAC 59.801 52.381 3.71 0.00 0.00 4.79
2350 2400 1.200252 CGCGATTATGATCCTCCGACT 59.800 52.381 0.00 0.00 0.00 4.18
2351 2401 2.600731 GCGATTATGATCCTCCGACTG 58.399 52.381 0.00 0.00 0.00 3.51
2352 2402 2.229062 GCGATTATGATCCTCCGACTGA 59.771 50.000 0.00 0.00 0.00 3.41
2353 2403 3.305403 GCGATTATGATCCTCCGACTGAA 60.305 47.826 0.00 0.00 0.00 3.02
2354 2404 4.480541 CGATTATGATCCTCCGACTGAAG 58.519 47.826 0.00 0.00 0.00 3.02
2355 2405 4.216472 CGATTATGATCCTCCGACTGAAGA 59.784 45.833 0.00 0.00 0.00 2.87
2356 2406 5.618863 CGATTATGATCCTCCGACTGAAGAG 60.619 48.000 0.00 0.00 0.00 2.85
2357 2407 1.107114 TGATCCTCCGACTGAAGAGC 58.893 55.000 0.00 0.00 0.00 4.09
2358 2408 1.107114 GATCCTCCGACTGAAGAGCA 58.893 55.000 0.00 0.00 0.00 4.26
2359 2409 1.478510 GATCCTCCGACTGAAGAGCAA 59.521 52.381 0.00 0.00 0.00 3.91
2360 2410 0.891373 TCCTCCGACTGAAGAGCAAG 59.109 55.000 0.00 0.00 0.00 4.01
2361 2411 0.891373 CCTCCGACTGAAGAGCAAGA 59.109 55.000 0.00 0.00 0.00 3.02
2362 2412 1.403514 CCTCCGACTGAAGAGCAAGAC 60.404 57.143 0.00 0.00 0.00 3.01
2363 2413 1.270826 CTCCGACTGAAGAGCAAGACA 59.729 52.381 0.00 0.00 0.00 3.41
2364 2414 1.270826 TCCGACTGAAGAGCAAGACAG 59.729 52.381 0.00 0.00 36.58 3.51
2365 2415 1.000283 CCGACTGAAGAGCAAGACAGT 60.000 52.381 0.00 0.00 44.56 3.55
2366 2416 2.057316 CGACTGAAGAGCAAGACAGTG 58.943 52.381 0.00 0.00 42.45 3.66
2367 2417 2.411904 GACTGAAGAGCAAGACAGTGG 58.588 52.381 0.00 0.00 42.45 4.00
2368 2418 2.036475 GACTGAAGAGCAAGACAGTGGA 59.964 50.000 0.00 0.00 42.45 4.02
2369 2419 2.224161 ACTGAAGAGCAAGACAGTGGAC 60.224 50.000 0.00 0.00 41.16 4.02
2370 2420 1.269778 TGAAGAGCAAGACAGTGGACG 60.270 52.381 0.00 0.00 0.00 4.79
2371 2421 0.753262 AAGAGCAAGACAGTGGACGT 59.247 50.000 0.00 0.00 0.00 4.34
2372 2422 0.315568 AGAGCAAGACAGTGGACGTC 59.684 55.000 7.13 7.13 0.00 4.34
2373 2423 0.667792 GAGCAAGACAGTGGACGTCC 60.668 60.000 28.17 28.17 33.70 4.79
2374 2424 1.115930 AGCAAGACAGTGGACGTCCT 61.116 55.000 33.39 15.17 36.82 3.85
2375 2425 0.667792 GCAAGACAGTGGACGTCCTC 60.668 60.000 33.39 29.42 36.82 3.71
2376 2426 0.387367 CAAGACAGTGGACGTCCTCG 60.387 60.000 33.39 25.35 43.34 4.63
2377 2427 0.536687 AAGACAGTGGACGTCCTCGA 60.537 55.000 33.39 12.78 40.62 4.04
2378 2428 0.322636 AGACAGTGGACGTCCTCGAT 60.323 55.000 33.39 22.62 40.62 3.59
2379 2429 0.099082 GACAGTGGACGTCCTCGATC 59.901 60.000 33.39 25.74 40.62 3.69
2380 2430 0.608308 ACAGTGGACGTCCTCGATCA 60.608 55.000 33.39 11.17 40.62 2.92
2381 2431 0.741326 CAGTGGACGTCCTCGATCAT 59.259 55.000 33.39 12.40 40.62 2.45
2382 2432 1.025812 AGTGGACGTCCTCGATCATC 58.974 55.000 33.39 13.79 40.62 2.92
2383 2433 0.030908 GTGGACGTCCTCGATCATCC 59.969 60.000 33.39 5.88 40.62 3.51
2384 2434 0.106669 TGGACGTCCTCGATCATCCT 60.107 55.000 33.39 0.00 40.62 3.24
2385 2435 1.033574 GGACGTCCTCGATCATCCTT 58.966 55.000 27.64 0.00 40.62 3.36
2386 2436 1.001158 GGACGTCCTCGATCATCCTTC 60.001 57.143 27.64 0.00 40.62 3.46
2387 2437 1.950909 GACGTCCTCGATCATCCTTCT 59.049 52.381 3.51 0.00 40.62 2.85
2388 2438 1.950909 ACGTCCTCGATCATCCTTCTC 59.049 52.381 0.00 0.00 40.62 2.87
2389 2439 1.268352 CGTCCTCGATCATCCTTCTCC 59.732 57.143 0.00 0.00 39.71 3.71
2390 2440 2.311463 GTCCTCGATCATCCTTCTCCA 58.689 52.381 0.00 0.00 0.00 3.86
2391 2441 2.896685 GTCCTCGATCATCCTTCTCCAT 59.103 50.000 0.00 0.00 0.00 3.41
2392 2442 2.896044 TCCTCGATCATCCTTCTCCATG 59.104 50.000 0.00 0.00 0.00 3.66
2393 2443 2.896044 CCTCGATCATCCTTCTCCATGA 59.104 50.000 0.00 0.00 33.55 3.07
2394 2444 3.305950 CCTCGATCATCCTTCTCCATGAC 60.306 52.174 0.00 0.00 31.80 3.06
2395 2445 3.570540 TCGATCATCCTTCTCCATGACT 58.429 45.455 0.00 0.00 31.80 3.41
2396 2446 4.729868 TCGATCATCCTTCTCCATGACTA 58.270 43.478 0.00 0.00 31.80 2.59
2397 2447 4.764308 TCGATCATCCTTCTCCATGACTAG 59.236 45.833 0.00 0.00 31.80 2.57
2398 2448 4.522405 CGATCATCCTTCTCCATGACTAGT 59.478 45.833 0.00 0.00 31.80 2.57
2399 2449 5.010516 CGATCATCCTTCTCCATGACTAGTT 59.989 44.000 0.00 0.00 31.80 2.24
2400 2450 5.604758 TCATCCTTCTCCATGACTAGTTG 57.395 43.478 0.00 0.00 0.00 3.16
2401 2451 4.406972 TCATCCTTCTCCATGACTAGTTGG 59.593 45.833 7.21 7.21 0.00 3.77
2402 2452 3.791320 TCCTTCTCCATGACTAGTTGGT 58.209 45.455 12.38 0.00 34.48 3.67
2403 2453 3.515502 TCCTTCTCCATGACTAGTTGGTG 59.484 47.826 12.38 10.47 34.48 4.17
2404 2454 3.369892 CCTTCTCCATGACTAGTTGGTGG 60.370 52.174 12.38 12.81 34.48 4.61
2405 2455 2.902608 TCTCCATGACTAGTTGGTGGT 58.097 47.619 12.38 0.00 34.48 4.16
2406 2456 4.055710 TCTCCATGACTAGTTGGTGGTA 57.944 45.455 12.38 5.21 34.48 3.25
2407 2457 4.422057 TCTCCATGACTAGTTGGTGGTAA 58.578 43.478 12.38 4.95 34.48 2.85
2408 2458 4.222145 TCTCCATGACTAGTTGGTGGTAAC 59.778 45.833 12.38 0.00 34.48 2.50
2422 2472 5.038247 GGTGGTAACCAAAAGTACATTCG 57.962 43.478 0.00 0.00 46.75 3.34
2423 2473 4.756135 GGTGGTAACCAAAAGTACATTCGA 59.244 41.667 0.00 0.00 46.75 3.71
2424 2474 5.413523 GGTGGTAACCAAAAGTACATTCGAT 59.586 40.000 0.00 0.00 46.75 3.59
2425 2475 6.072342 GGTGGTAACCAAAAGTACATTCGATT 60.072 38.462 0.00 0.00 46.75 3.34
2426 2476 7.119553 GGTGGTAACCAAAAGTACATTCGATTA 59.880 37.037 0.00 0.00 46.75 1.75
2427 2477 8.173130 GTGGTAACCAAAAGTACATTCGATTAG 58.827 37.037 0.00 0.00 34.18 1.73
2428 2478 7.879160 TGGTAACCAAAAGTACATTCGATTAGT 59.121 33.333 0.00 0.00 0.00 2.24
2429 2479 8.173130 GGTAACCAAAAGTACATTCGATTAGTG 58.827 37.037 0.00 0.00 0.00 2.74
2430 2480 7.739498 AACCAAAAGTACATTCGATTAGTGT 57.261 32.000 0.00 0.00 0.00 3.55
2431 2481 7.739498 ACCAAAAGTACATTCGATTAGTGTT 57.261 32.000 0.00 0.00 0.00 3.32
2432 2482 8.161699 ACCAAAAGTACATTCGATTAGTGTTT 57.838 30.769 0.00 0.00 0.00 2.83
2433 2483 8.073768 ACCAAAAGTACATTCGATTAGTGTTTG 58.926 33.333 0.00 0.00 0.00 2.93
2434 2484 8.073768 CCAAAAGTACATTCGATTAGTGTTTGT 58.926 33.333 0.00 0.00 0.00 2.83
2439 2489 8.879759 AGTACATTCGATTAGTGTTTGTAATGG 58.120 33.333 0.00 0.00 0.00 3.16
2440 2490 7.915293 ACATTCGATTAGTGTTTGTAATGGA 57.085 32.000 0.00 0.00 0.00 3.41
2441 2491 7.974675 ACATTCGATTAGTGTTTGTAATGGAG 58.025 34.615 0.00 0.00 29.63 3.86
2442 2492 7.606456 ACATTCGATTAGTGTTTGTAATGGAGT 59.394 33.333 0.00 0.00 29.63 3.85
2443 2493 9.093970 CATTCGATTAGTGTTTGTAATGGAGTA 57.906 33.333 0.00 0.00 29.63 2.59
2444 2494 8.697846 TTCGATTAGTGTTTGTAATGGAGTAG 57.302 34.615 0.00 0.00 29.63 2.57
2445 2495 8.058667 TCGATTAGTGTTTGTAATGGAGTAGA 57.941 34.615 0.00 0.00 0.00 2.59
2446 2496 8.525316 TCGATTAGTGTTTGTAATGGAGTAGAA 58.475 33.333 0.00 0.00 0.00 2.10
2447 2497 9.314321 CGATTAGTGTTTGTAATGGAGTAGAAT 57.686 33.333 0.00 0.00 0.00 2.40
2451 2501 8.494016 AGTGTTTGTAATGGAGTAGAATAAGC 57.506 34.615 0.00 0.00 0.00 3.09
2452 2502 8.100791 AGTGTTTGTAATGGAGTAGAATAAGCA 58.899 33.333 0.00 0.00 0.00 3.91
2453 2503 8.175716 GTGTTTGTAATGGAGTAGAATAAGCAC 58.824 37.037 0.00 0.00 0.00 4.40
2454 2504 7.880713 TGTTTGTAATGGAGTAGAATAAGCACA 59.119 33.333 0.00 0.00 0.00 4.57
2455 2505 8.391106 GTTTGTAATGGAGTAGAATAAGCACAG 58.609 37.037 0.00 0.00 0.00 3.66
2456 2506 7.418337 TGTAATGGAGTAGAATAAGCACAGA 57.582 36.000 0.00 0.00 0.00 3.41
2457 2507 7.265673 TGTAATGGAGTAGAATAAGCACAGAC 58.734 38.462 0.00 0.00 0.00 3.51
2458 2508 4.371855 TGGAGTAGAATAAGCACAGACG 57.628 45.455 0.00 0.00 0.00 4.18
2459 2509 4.014406 TGGAGTAGAATAAGCACAGACGA 58.986 43.478 0.00 0.00 0.00 4.20
2460 2510 4.461431 TGGAGTAGAATAAGCACAGACGAA 59.539 41.667 0.00 0.00 0.00 3.85
2461 2511 5.127194 TGGAGTAGAATAAGCACAGACGAAT 59.873 40.000 0.00 0.00 0.00 3.34
2462 2512 5.688176 GGAGTAGAATAAGCACAGACGAATC 59.312 44.000 0.00 0.00 0.00 2.52
2463 2513 5.274718 AGTAGAATAAGCACAGACGAATCG 58.725 41.667 0.00 0.00 0.00 3.34
2464 2514 4.371855 AGAATAAGCACAGACGAATCGA 57.628 40.909 10.55 0.00 0.00 3.59
2465 2515 4.744570 AGAATAAGCACAGACGAATCGAA 58.255 39.130 10.55 0.00 0.00 3.71
2466 2516 5.168569 AGAATAAGCACAGACGAATCGAAA 58.831 37.500 10.55 0.00 0.00 3.46
2467 2517 5.812642 AGAATAAGCACAGACGAATCGAAAT 59.187 36.000 10.55 0.00 0.00 2.17
2468 2518 3.999229 AAGCACAGACGAATCGAAATC 57.001 42.857 10.55 0.00 0.00 2.17
2469 2519 3.238108 AGCACAGACGAATCGAAATCT 57.762 42.857 10.55 0.00 0.00 2.40
2470 2520 3.589988 AGCACAGACGAATCGAAATCTT 58.410 40.909 10.55 0.00 0.00 2.40
2471 2521 4.744570 AGCACAGACGAATCGAAATCTTA 58.255 39.130 10.55 0.00 0.00 2.10
2472 2522 4.563184 AGCACAGACGAATCGAAATCTTAC 59.437 41.667 10.55 0.00 0.00 2.34
2473 2523 4.259850 GCACAGACGAATCGAAATCTTACC 60.260 45.833 10.55 0.00 0.00 2.85
2474 2524 4.267928 CACAGACGAATCGAAATCTTACCC 59.732 45.833 10.55 0.00 0.00 3.69
2475 2525 4.081862 ACAGACGAATCGAAATCTTACCCA 60.082 41.667 10.55 0.00 0.00 4.51
2476 2526 5.050490 CAGACGAATCGAAATCTTACCCAT 58.950 41.667 10.55 0.00 0.00 4.00
2477 2527 5.523916 CAGACGAATCGAAATCTTACCCATT 59.476 40.000 10.55 0.00 0.00 3.16
2478 2528 5.753921 AGACGAATCGAAATCTTACCCATTC 59.246 40.000 10.55 0.00 0.00 2.67
2479 2529 5.424757 ACGAATCGAAATCTTACCCATTCA 58.575 37.500 10.55 0.00 0.00 2.57
2480 2530 5.878116 ACGAATCGAAATCTTACCCATTCAA 59.122 36.000 10.55 0.00 0.00 2.69
2481 2531 6.542370 ACGAATCGAAATCTTACCCATTCAAT 59.458 34.615 10.55 0.00 0.00 2.57
2482 2532 7.713507 ACGAATCGAAATCTTACCCATTCAATA 59.286 33.333 10.55 0.00 0.00 1.90
2483 2533 8.223769 CGAATCGAAATCTTACCCATTCAATAG 58.776 37.037 0.00 0.00 0.00 1.73
2484 2534 7.986085 ATCGAAATCTTACCCATTCAATAGG 57.014 36.000 0.00 0.00 0.00 2.57
2492 2542 3.943671 CCCATTCAATAGGGGTGTACA 57.056 47.619 0.00 0.00 41.58 2.90
2493 2543 4.453480 CCCATTCAATAGGGGTGTACAT 57.547 45.455 0.00 0.00 41.58 2.29
2494 2544 4.144297 CCCATTCAATAGGGGTGTACATG 58.856 47.826 0.00 0.00 41.58 3.21
2495 2545 4.144297 CCATTCAATAGGGGTGTACATGG 58.856 47.826 0.00 0.00 0.00 3.66
2496 2546 4.141274 CCATTCAATAGGGGTGTACATGGA 60.141 45.833 0.00 0.00 31.91 3.41
2497 2547 5.445069 CATTCAATAGGGGTGTACATGGAA 58.555 41.667 0.00 0.00 0.00 3.53
2498 2548 5.725551 TTCAATAGGGGTGTACATGGAAT 57.274 39.130 0.00 0.00 0.00 3.01
2499 2549 6.833346 TTCAATAGGGGTGTACATGGAATA 57.167 37.500 0.00 0.00 0.00 1.75
2500 2550 6.433847 TCAATAGGGGTGTACATGGAATAG 57.566 41.667 0.00 0.00 0.00 1.73
2501 2551 6.147473 TCAATAGGGGTGTACATGGAATAGA 58.853 40.000 0.00 0.00 0.00 1.98
2502 2552 6.042781 TCAATAGGGGTGTACATGGAATAGAC 59.957 42.308 0.00 0.00 0.00 2.59
2503 2553 3.046374 AGGGGTGTACATGGAATAGACC 58.954 50.000 0.00 0.00 35.66 3.85
2504 2554 3.046374 GGGGTGTACATGGAATAGACCT 58.954 50.000 0.00 0.00 36.45 3.85
2505 2555 3.071167 GGGGTGTACATGGAATAGACCTC 59.929 52.174 0.00 1.30 36.45 3.85
2506 2556 3.071167 GGGTGTACATGGAATAGACCTCC 59.929 52.174 0.00 0.00 36.45 4.30
2507 2557 3.071167 GGTGTACATGGAATAGACCTCCC 59.929 52.174 0.00 0.00 34.02 4.30
2508 2558 2.963101 TGTACATGGAATAGACCTCCCG 59.037 50.000 0.00 0.00 31.32 5.14
2509 2559 2.176247 ACATGGAATAGACCTCCCGT 57.824 50.000 0.00 0.00 31.32 5.28
2510 2560 2.040178 ACATGGAATAGACCTCCCGTC 58.960 52.381 0.00 0.00 42.32 4.79
2511 2561 2.039418 CATGGAATAGACCTCCCGTCA 58.961 52.381 0.00 0.00 44.66 4.35
2512 2562 1.776662 TGGAATAGACCTCCCGTCAG 58.223 55.000 0.00 0.00 44.66 3.51
2513 2563 1.006758 TGGAATAGACCTCCCGTCAGT 59.993 52.381 0.00 0.00 44.66 3.41
2514 2564 2.108970 GGAATAGACCTCCCGTCAGTT 58.891 52.381 0.00 0.00 44.66 3.16
2515 2565 2.500504 GGAATAGACCTCCCGTCAGTTT 59.499 50.000 0.00 0.00 44.66 2.66
2516 2566 3.703052 GGAATAGACCTCCCGTCAGTTTA 59.297 47.826 0.00 0.00 44.66 2.01
2517 2567 4.161001 GGAATAGACCTCCCGTCAGTTTAA 59.839 45.833 0.00 0.00 44.66 1.52
2518 2568 4.732672 ATAGACCTCCCGTCAGTTTAAC 57.267 45.455 0.00 0.00 44.66 2.01
2519 2569 1.622312 AGACCTCCCGTCAGTTTAACC 59.378 52.381 0.00 0.00 44.66 2.85
2520 2570 0.319405 ACCTCCCGTCAGTTTAACCG 59.681 55.000 0.00 0.00 0.00 4.44
2521 2571 0.390735 CCTCCCGTCAGTTTAACCGG 60.391 60.000 0.00 0.00 40.12 5.28
2522 2572 0.604578 CTCCCGTCAGTTTAACCGGA 59.395 55.000 9.46 0.00 43.01 5.14
2523 2573 0.604578 TCCCGTCAGTTTAACCGGAG 59.395 55.000 9.46 4.01 43.01 4.63
2524 2574 0.604578 CCCGTCAGTTTAACCGGAGA 59.395 55.000 9.46 0.00 43.01 3.71
2525 2575 1.001181 CCCGTCAGTTTAACCGGAGAA 59.999 52.381 9.46 0.00 43.01 2.87
2526 2576 2.548493 CCCGTCAGTTTAACCGGAGAAA 60.548 50.000 9.46 4.74 43.01 2.52
2527 2577 2.735134 CCGTCAGTTTAACCGGAGAAAG 59.265 50.000 9.46 0.00 43.01 2.62
2528 2578 3.387397 CGTCAGTTTAACCGGAGAAAGT 58.613 45.455 9.46 7.94 0.00 2.66
2529 2579 3.427863 CGTCAGTTTAACCGGAGAAAGTC 59.572 47.826 9.46 0.00 0.00 3.01
2530 2580 4.629092 GTCAGTTTAACCGGAGAAAGTCT 58.371 43.478 9.46 0.00 0.00 3.24
2531 2581 5.055144 GTCAGTTTAACCGGAGAAAGTCTT 58.945 41.667 9.46 0.00 0.00 3.01
2532 2582 5.177142 GTCAGTTTAACCGGAGAAAGTCTTC 59.823 44.000 9.46 0.00 0.00 2.87
2533 2583 5.070047 TCAGTTTAACCGGAGAAAGTCTTCT 59.930 40.000 9.46 0.00 44.93 2.85
2534 2584 5.758784 CAGTTTAACCGGAGAAAGTCTTCTT 59.241 40.000 9.46 0.00 42.19 2.52
2535 2585 6.260271 CAGTTTAACCGGAGAAAGTCTTCTTT 59.740 38.462 9.46 0.00 42.19 2.52
2536 2586 6.827251 AGTTTAACCGGAGAAAGTCTTCTTTT 59.173 34.615 9.46 0.00 42.19 2.27
2537 2587 7.338703 AGTTTAACCGGAGAAAGTCTTCTTTTT 59.661 33.333 9.46 0.00 42.19 1.94
2538 2588 5.752892 AACCGGAGAAAGTCTTCTTTTTC 57.247 39.130 9.46 0.00 42.19 2.29
2539 2589 3.808174 ACCGGAGAAAGTCTTCTTTTTCG 59.192 43.478 9.46 0.00 42.19 3.46
2540 2590 3.364068 CCGGAGAAAGTCTTCTTTTTCGC 60.364 47.826 0.00 0.00 42.19 4.70
2541 2591 3.364068 CGGAGAAAGTCTTCTTTTTCGCC 60.364 47.826 8.94 8.94 44.65 5.54
2542 2592 3.058155 GGAGAAAGTCTTCTTTTTCGCCC 60.058 47.826 8.07 3.26 43.30 6.13
2543 2593 3.815962 GAGAAAGTCTTCTTTTTCGCCCT 59.184 43.478 0.00 0.00 42.19 5.19
2544 2594 4.207955 AGAAAGTCTTCTTTTTCGCCCTT 58.792 39.130 0.00 0.00 42.99 3.95
2545 2595 3.990318 AAGTCTTCTTTTTCGCCCTTG 57.010 42.857 0.00 0.00 0.00 3.61
2546 2596 2.932261 AGTCTTCTTTTTCGCCCTTGT 58.068 42.857 0.00 0.00 0.00 3.16
2547 2597 4.081322 AGTCTTCTTTTTCGCCCTTGTA 57.919 40.909 0.00 0.00 0.00 2.41
2548 2598 4.652822 AGTCTTCTTTTTCGCCCTTGTAT 58.347 39.130 0.00 0.00 0.00 2.29
2549 2599 5.801380 AGTCTTCTTTTTCGCCCTTGTATA 58.199 37.500 0.00 0.00 0.00 1.47
2550 2600 5.875359 AGTCTTCTTTTTCGCCCTTGTATAG 59.125 40.000 0.00 0.00 0.00 1.31
2551 2601 5.873164 GTCTTCTTTTTCGCCCTTGTATAGA 59.127 40.000 0.00 0.00 0.00 1.98
2552 2602 6.539103 GTCTTCTTTTTCGCCCTTGTATAGAT 59.461 38.462 0.00 0.00 0.00 1.98
2553 2603 6.761714 TCTTCTTTTTCGCCCTTGTATAGATC 59.238 38.462 0.00 0.00 0.00 2.75
2554 2604 5.047847 TCTTTTTCGCCCTTGTATAGATCG 58.952 41.667 0.00 0.00 0.00 3.69
2555 2605 3.380479 TTTCGCCCTTGTATAGATCGG 57.620 47.619 0.00 0.00 0.00 4.18
2556 2606 0.601558 TCGCCCTTGTATAGATCGGC 59.398 55.000 0.00 0.00 0.00 5.54
2557 2607 0.389948 CGCCCTTGTATAGATCGGCC 60.390 60.000 0.00 0.00 32.61 6.13
2558 2608 0.685097 GCCCTTGTATAGATCGGCCA 59.315 55.000 2.24 0.00 0.00 5.36
2559 2609 1.071699 GCCCTTGTATAGATCGGCCAA 59.928 52.381 2.24 0.00 0.00 4.52
2560 2610 2.486548 GCCCTTGTATAGATCGGCCAAA 60.487 50.000 2.24 0.00 0.00 3.28
2561 2611 3.815809 CCCTTGTATAGATCGGCCAAAA 58.184 45.455 2.24 0.00 0.00 2.44
2562 2612 4.398319 CCCTTGTATAGATCGGCCAAAAT 58.602 43.478 2.24 0.00 0.00 1.82
2563 2613 4.827284 CCCTTGTATAGATCGGCCAAAATT 59.173 41.667 2.24 0.00 0.00 1.82
2564 2614 5.278463 CCCTTGTATAGATCGGCCAAAATTG 60.278 44.000 2.24 0.00 0.00 2.32
2565 2615 5.530915 CCTTGTATAGATCGGCCAAAATTGA 59.469 40.000 2.24 0.00 0.00 2.57
2566 2616 6.039270 CCTTGTATAGATCGGCCAAAATTGAA 59.961 38.462 2.24 0.00 0.00 2.69
2567 2617 7.397892 TTGTATAGATCGGCCAAAATTGAAA 57.602 32.000 2.24 0.00 0.00 2.69
2568 2618 6.791303 TGTATAGATCGGCCAAAATTGAAAC 58.209 36.000 2.24 0.00 0.00 2.78
2569 2619 6.601613 TGTATAGATCGGCCAAAATTGAAACT 59.398 34.615 2.24 0.00 0.00 2.66
2570 2620 7.771361 TGTATAGATCGGCCAAAATTGAAACTA 59.229 33.333 2.24 0.27 0.00 2.24
2571 2621 5.567138 AGATCGGCCAAAATTGAAACTAG 57.433 39.130 2.24 0.00 0.00 2.57
2572 2622 5.010282 AGATCGGCCAAAATTGAAACTAGT 58.990 37.500 2.24 0.00 0.00 2.57
2573 2623 5.476945 AGATCGGCCAAAATTGAAACTAGTT 59.523 36.000 2.24 1.12 0.00 2.24
2574 2624 5.116069 TCGGCCAAAATTGAAACTAGTTC 57.884 39.130 8.95 3.51 36.70 3.01
2575 2625 3.911964 CGGCCAAAATTGAAACTAGTTCG 59.088 43.478 8.95 0.00 39.30 3.95
2576 2626 4.234574 GGCCAAAATTGAAACTAGTTCGG 58.765 43.478 8.95 1.48 39.30 4.30
2577 2627 4.261867 GGCCAAAATTGAAACTAGTTCGGT 60.262 41.667 8.95 0.00 39.30 4.69
2578 2628 5.286438 GCCAAAATTGAAACTAGTTCGGTT 58.714 37.500 8.95 0.00 39.30 4.44
2579 2629 5.174943 GCCAAAATTGAAACTAGTTCGGTTG 59.825 40.000 8.95 7.75 39.30 3.77
2580 2630 5.689961 CCAAAATTGAAACTAGTTCGGTTGG 59.310 40.000 8.95 12.35 39.30 3.77
2581 2631 5.447624 AAATTGAAACTAGTTCGGTTGGG 57.552 39.130 8.95 0.00 39.30 4.12
2582 2632 2.554370 TGAAACTAGTTCGGTTGGGG 57.446 50.000 8.95 0.00 39.30 4.96
2583 2633 1.770061 TGAAACTAGTTCGGTTGGGGT 59.230 47.619 8.95 0.00 39.30 4.95
2584 2634 2.971330 TGAAACTAGTTCGGTTGGGGTA 59.029 45.455 8.95 0.00 39.30 3.69
2585 2635 3.583966 TGAAACTAGTTCGGTTGGGGTAT 59.416 43.478 8.95 0.00 39.30 2.73
2586 2636 3.900966 AACTAGTTCGGTTGGGGTATC 57.099 47.619 1.12 0.00 0.00 2.24
2587 2637 2.113807 ACTAGTTCGGTTGGGGTATCC 58.886 52.381 0.00 0.00 0.00 2.59
2588 2638 1.068127 CTAGTTCGGTTGGGGTATCCG 59.932 57.143 0.00 0.00 44.76 4.18
2589 2639 1.153309 GTTCGGTTGGGGTATCCGG 60.153 63.158 0.00 0.00 43.75 5.14
2590 2640 1.305971 TTCGGTTGGGGTATCCGGA 60.306 57.895 6.61 6.61 43.75 5.14
2591 2641 1.616091 TTCGGTTGGGGTATCCGGAC 61.616 60.000 6.12 0.00 43.75 4.79
2592 2642 2.913501 GGTTGGGGTATCCGGACC 59.086 66.667 6.12 4.64 38.76 4.46
2604 2654 3.066190 CGGACCCTGCCGTCTGTA 61.066 66.667 0.00 0.00 46.07 2.74
2605 2655 2.642254 CGGACCCTGCCGTCTGTAA 61.642 63.158 0.00 0.00 46.07 2.41
2606 2656 1.079336 GGACCCTGCCGTCTGTAAC 60.079 63.158 0.00 0.00 33.07 2.50
2615 2665 4.904466 GTCTGTAACGGGATGCGT 57.096 55.556 0.00 0.00 0.00 5.24
2616 2666 2.662150 GTCTGTAACGGGATGCGTC 58.338 57.895 0.00 0.00 0.00 5.19
2617 2667 1.138036 TCTGTAACGGGATGCGTCG 59.862 57.895 0.00 0.00 0.00 5.12
2618 2668 1.153901 CTGTAACGGGATGCGTCGT 60.154 57.895 0.00 0.00 41.71 4.34
2619 2669 1.138047 CTGTAACGGGATGCGTCGTC 61.138 60.000 0.00 0.00 38.78 4.20
2620 2670 1.138247 GTAACGGGATGCGTCGTCT 59.862 57.895 0.00 0.00 38.78 4.18
2621 2671 0.457337 GTAACGGGATGCGTCGTCTT 60.457 55.000 0.00 0.00 38.78 3.01
2622 2672 0.179156 TAACGGGATGCGTCGTCTTC 60.179 55.000 0.00 0.00 38.78 2.87
2623 2673 1.874345 AACGGGATGCGTCGTCTTCT 61.874 55.000 0.00 0.00 38.78 2.85
2624 2674 1.586564 CGGGATGCGTCGTCTTCTC 60.587 63.158 0.00 0.00 0.00 2.87
2625 2675 1.227002 GGGATGCGTCGTCTTCTCC 60.227 63.158 0.00 0.00 0.00 3.71
2626 2676 1.511305 GGATGCGTCGTCTTCTCCA 59.489 57.895 0.00 0.00 0.00 3.86
2627 2677 0.103208 GGATGCGTCGTCTTCTCCAT 59.897 55.000 0.00 0.00 0.00 3.41
2628 2678 1.471676 GGATGCGTCGTCTTCTCCATT 60.472 52.381 0.00 0.00 0.00 3.16
2629 2679 2.223735 GGATGCGTCGTCTTCTCCATTA 60.224 50.000 0.00 0.00 0.00 1.90
2630 2680 3.553096 GGATGCGTCGTCTTCTCCATTAT 60.553 47.826 0.00 0.00 0.00 1.28
2631 2681 4.321008 GGATGCGTCGTCTTCTCCATTATA 60.321 45.833 0.00 0.00 0.00 0.98
2632 2682 4.642445 TGCGTCGTCTTCTCCATTATAA 57.358 40.909 0.00 0.00 0.00 0.98
2633 2683 4.357142 TGCGTCGTCTTCTCCATTATAAC 58.643 43.478 0.00 0.00 0.00 1.89
2634 2684 4.142337 TGCGTCGTCTTCTCCATTATAACA 60.142 41.667 0.00 0.00 0.00 2.41
2635 2685 4.206609 GCGTCGTCTTCTCCATTATAACAC 59.793 45.833 0.00 0.00 0.00 3.32
2636 2686 5.337554 CGTCGTCTTCTCCATTATAACACA 58.662 41.667 0.00 0.00 0.00 3.72
2637 2687 5.803461 CGTCGTCTTCTCCATTATAACACAA 59.197 40.000 0.00 0.00 0.00 3.33
2638 2688 6.475727 CGTCGTCTTCTCCATTATAACACAAT 59.524 38.462 0.00 0.00 0.00 2.71
2639 2689 7.646526 CGTCGTCTTCTCCATTATAACACAATA 59.353 37.037 0.00 0.00 0.00 1.90
2640 2690 9.309516 GTCGTCTTCTCCATTATAACACAATAA 57.690 33.333 0.00 0.00 0.00 1.40
2641 2691 9.878667 TCGTCTTCTCCATTATAACACAATAAA 57.121 29.630 0.00 0.00 0.00 1.40
2657 2707 9.574516 AACACAATAAAGAAGTTACTCTGGATT 57.425 29.630 0.00 0.00 0.00 3.01
2658 2708 9.003658 ACACAATAAAGAAGTTACTCTGGATTG 57.996 33.333 12.10 12.10 35.93 2.67
2659 2709 9.219603 CACAATAAAGAAGTTACTCTGGATTGA 57.780 33.333 16.28 0.00 34.71 2.57
2660 2710 9.793259 ACAATAAAGAAGTTACTCTGGATTGAA 57.207 29.630 16.28 0.00 34.71 2.69
2663 2713 9.883142 ATAAAGAAGTTACTCTGGATTGAAGAG 57.117 33.333 0.00 0.00 45.57 2.85
2664 2714 6.293004 AGAAGTTACTCTGGATTGAAGAGG 57.707 41.667 5.51 0.00 44.58 3.69
2665 2715 4.479786 AGTTACTCTGGATTGAAGAGGC 57.520 45.455 5.51 0.00 44.58 4.70
2666 2716 4.100373 AGTTACTCTGGATTGAAGAGGCT 58.900 43.478 5.51 0.00 44.58 4.58
2667 2717 4.081198 AGTTACTCTGGATTGAAGAGGCTG 60.081 45.833 0.00 0.00 44.58 4.85
2668 2718 1.065564 ACTCTGGATTGAAGAGGCTGC 60.066 52.381 0.00 0.00 44.58 5.25
2669 2719 0.986527 TCTGGATTGAAGAGGCTGCA 59.013 50.000 0.50 0.00 0.00 4.41
2670 2720 1.093159 CTGGATTGAAGAGGCTGCAC 58.907 55.000 0.50 0.00 0.00 4.57
2671 2721 0.674581 TGGATTGAAGAGGCTGCACG 60.675 55.000 0.50 0.00 0.00 5.34
2672 2722 1.427020 GATTGAAGAGGCTGCACGC 59.573 57.895 0.50 0.11 38.13 5.34
2673 2723 1.300971 GATTGAAGAGGCTGCACGCA 61.301 55.000 0.50 0.00 41.67 5.24
2674 2724 0.679002 ATTGAAGAGGCTGCACGCAT 60.679 50.000 0.50 3.10 41.67 4.73
2678 2728 2.186384 GAGGCTGCACGCATCTCT 59.814 61.111 13.22 3.05 45.51 3.10
2679 2729 1.449246 GAGGCTGCACGCATCTCTT 60.449 57.895 13.22 0.00 45.51 2.85
2680 2730 1.002868 AGGCTGCACGCATCTCTTT 60.003 52.632 0.50 0.00 41.67 2.52
2681 2731 0.250234 AGGCTGCACGCATCTCTTTA 59.750 50.000 0.50 0.00 41.67 1.85
2682 2732 1.134280 AGGCTGCACGCATCTCTTTAT 60.134 47.619 0.50 0.00 41.67 1.40
2683 2733 1.672881 GGCTGCACGCATCTCTTTATT 59.327 47.619 0.50 0.00 41.67 1.40
2684 2734 2.540361 GGCTGCACGCATCTCTTTATTG 60.540 50.000 0.50 0.00 41.67 1.90
2685 2735 2.713011 CTGCACGCATCTCTTTATTGC 58.287 47.619 0.00 0.00 0.00 3.56
2691 2741 2.832306 GCATCTCTTTATTGCGATCGC 58.168 47.619 32.48 32.48 42.35 4.58
2692 2742 2.412065 GCATCTCTTTATTGCGATCGCC 60.412 50.000 35.12 18.76 41.09 5.54
2693 2743 2.595124 TCTCTTTATTGCGATCGCCA 57.405 45.000 35.12 26.58 41.09 5.69
2694 2744 3.111853 TCTCTTTATTGCGATCGCCAT 57.888 42.857 35.12 30.84 41.09 4.40
2695 2745 2.802247 TCTCTTTATTGCGATCGCCATG 59.198 45.455 35.12 18.61 41.09 3.66
2696 2746 2.802247 CTCTTTATTGCGATCGCCATGA 59.198 45.455 35.12 24.16 41.09 3.07
2697 2747 2.543848 TCTTTATTGCGATCGCCATGAC 59.456 45.455 35.12 9.42 41.09 3.06
2698 2748 2.238942 TTATTGCGATCGCCATGACT 57.761 45.000 35.12 14.64 41.09 3.41
2699 2749 2.238942 TATTGCGATCGCCATGACTT 57.761 45.000 35.12 13.14 41.09 3.01
2700 2750 0.940126 ATTGCGATCGCCATGACTTC 59.060 50.000 35.12 7.13 41.09 3.01
2701 2751 0.108186 TTGCGATCGCCATGACTTCT 60.108 50.000 35.12 0.00 41.09 2.85
2702 2752 0.744281 TGCGATCGCCATGACTTCTA 59.256 50.000 35.12 11.48 41.09 2.10
2703 2753 1.132588 GCGATCGCCATGACTTCTAC 58.867 55.000 29.48 0.00 34.56 2.59
2704 2754 1.269309 GCGATCGCCATGACTTCTACT 60.269 52.381 29.48 0.00 34.56 2.57
2705 2755 2.031069 GCGATCGCCATGACTTCTACTA 60.031 50.000 29.48 0.00 34.56 1.82
2706 2756 3.366476 GCGATCGCCATGACTTCTACTAT 60.366 47.826 29.48 0.00 34.56 2.12
2707 2757 4.799678 CGATCGCCATGACTTCTACTATT 58.200 43.478 0.26 0.00 0.00 1.73
2708 2758 4.618912 CGATCGCCATGACTTCTACTATTG 59.381 45.833 0.26 0.00 0.00 1.90
2709 2759 5.562890 CGATCGCCATGACTTCTACTATTGA 60.563 44.000 0.26 0.00 0.00 2.57
2710 2760 5.188327 TCGCCATGACTTCTACTATTGAG 57.812 43.478 0.00 0.00 0.00 3.02
2711 2761 4.887655 TCGCCATGACTTCTACTATTGAGA 59.112 41.667 0.00 0.00 0.00 3.27
2712 2762 5.009110 TCGCCATGACTTCTACTATTGAGAG 59.991 44.000 0.00 0.00 0.00 3.20
2713 2763 5.221145 CGCCATGACTTCTACTATTGAGAGT 60.221 44.000 0.00 0.00 0.00 3.24
2714 2764 6.578023 GCCATGACTTCTACTATTGAGAGTT 58.422 40.000 0.00 0.00 0.00 3.01
2715 2765 6.699642 GCCATGACTTCTACTATTGAGAGTTC 59.300 42.308 0.00 0.00 0.00 3.01
2716 2766 7.631594 GCCATGACTTCTACTATTGAGAGTTCA 60.632 40.741 0.00 0.00 0.00 3.18
2717 2767 7.920151 CCATGACTTCTACTATTGAGAGTTCAG 59.080 40.741 0.00 0.00 34.15 3.02
2718 2768 8.681806 CATGACTTCTACTATTGAGAGTTCAGA 58.318 37.037 0.00 0.00 34.15 3.27
2719 2769 8.637196 TGACTTCTACTATTGAGAGTTCAGAA 57.363 34.615 0.00 0.00 34.15 3.02
2720 2770 9.249053 TGACTTCTACTATTGAGAGTTCAGAAT 57.751 33.333 0.00 0.00 34.15 2.40
2721 2771 9.515020 GACTTCTACTATTGAGAGTTCAGAATG 57.485 37.037 0.00 0.00 34.15 2.67
2722 2772 8.474025 ACTTCTACTATTGAGAGTTCAGAATGG 58.526 37.037 0.00 0.00 36.16 3.16
2723 2773 7.353414 TCTACTATTGAGAGTTCAGAATGGG 57.647 40.000 0.00 0.00 36.16 4.00
2724 2774 4.775236 ACTATTGAGAGTTCAGAATGGGC 58.225 43.478 0.00 0.00 36.16 5.36
2725 2775 2.496899 TTGAGAGTTCAGAATGGGCC 57.503 50.000 0.00 0.00 36.16 5.80
2726 2776 1.361204 TGAGAGTTCAGAATGGGCCA 58.639 50.000 9.61 9.61 36.16 5.36
2727 2777 1.280133 TGAGAGTTCAGAATGGGCCAG 59.720 52.381 13.78 0.00 36.16 4.85
2728 2778 0.034670 AGAGTTCAGAATGGGCCAGC 60.035 55.000 13.78 6.73 36.16 4.85
2729 2779 0.034670 GAGTTCAGAATGGGCCAGCT 60.035 55.000 13.78 9.31 36.16 4.24
2730 2780 0.323178 AGTTCAGAATGGGCCAGCTG 60.323 55.000 25.28 25.28 36.16 4.24
2731 2781 0.610232 GTTCAGAATGGGCCAGCTGT 60.610 55.000 28.02 10.00 36.16 4.40
2732 2782 0.112995 TTCAGAATGGGCCAGCTGTT 59.887 50.000 28.02 13.34 36.16 3.16
2733 2783 0.609957 TCAGAATGGGCCAGCTGTTG 60.610 55.000 28.02 15.93 36.16 3.33
2734 2784 3.953826 TCAGAATGGGCCAGCTGTTGG 62.954 57.143 28.02 6.13 43.60 3.77
2741 2791 4.141144 CCAGCTGTTGGTGAACGT 57.859 55.556 13.81 0.00 43.76 3.99
2742 2792 3.299050 CCAGCTGTTGGTGAACGTA 57.701 52.632 13.81 0.00 43.76 3.57
2743 2793 1.148310 CCAGCTGTTGGTGAACGTAG 58.852 55.000 13.81 0.00 43.76 3.51
2744 2794 1.540363 CCAGCTGTTGGTGAACGTAGT 60.540 52.381 13.81 0.00 43.05 2.73
2745 2795 2.288579 CCAGCTGTTGGTGAACGTAGTA 60.289 50.000 13.81 0.00 40.99 1.82
2746 2796 3.386486 CAGCTGTTGGTGAACGTAGTAA 58.614 45.455 5.25 0.00 41.38 2.24
2747 2797 3.805422 CAGCTGTTGGTGAACGTAGTAAA 59.195 43.478 5.25 0.00 41.38 2.01
2748 2798 4.451096 CAGCTGTTGGTGAACGTAGTAAAT 59.549 41.667 5.25 0.00 41.38 1.40
2749 2799 5.049680 CAGCTGTTGGTGAACGTAGTAAATT 60.050 40.000 5.25 0.00 41.38 1.82
2750 2800 5.178809 AGCTGTTGGTGAACGTAGTAAATTC 59.821 40.000 0.00 0.00 45.00 2.17
2751 2801 5.049954 GCTGTTGGTGAACGTAGTAAATTCA 60.050 40.000 0.00 0.00 45.00 2.57
2752 2802 6.512091 GCTGTTGGTGAACGTAGTAAATTCAA 60.512 38.462 0.00 0.00 45.00 2.69
2753 2803 7.317842 TGTTGGTGAACGTAGTAAATTCAAA 57.682 32.000 0.00 0.00 45.00 2.69
2754 2804 7.759465 TGTTGGTGAACGTAGTAAATTCAAAA 58.241 30.769 0.00 0.00 45.00 2.44
2755 2805 8.242053 TGTTGGTGAACGTAGTAAATTCAAAAA 58.758 29.630 0.00 0.00 45.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 6.704493 ACTAAAATCTGAAACGAGTGTTGCTA 59.296 34.615 0.00 0.00 38.62 3.49
82 84 4.573201 GGCTATAATGCGTGGTGAAAACTA 59.427 41.667 0.00 0.00 0.00 2.24
177 180 4.873129 CCATCGCGCGCCTGTAGT 62.873 66.667 27.95 1.78 0.00 2.73
211 214 6.371548 GCATGGATAAAGTTCAGTTGTCACTA 59.628 38.462 0.00 0.00 0.00 2.74
214 217 5.048782 GTGCATGGATAAAGTTCAGTTGTCA 60.049 40.000 0.00 0.00 0.00 3.58
234 237 4.130857 TGGATAAAGTTCAACTTCGTGCA 58.869 39.130 2.45 4.24 37.47 4.57
257 260 1.199327 CGAGGAAGCTACAGTTGTCGA 59.801 52.381 0.00 0.00 0.00 4.20
267 270 1.079127 GCACAAGCCGAGGAAGCTA 60.079 57.895 0.00 0.00 40.49 3.32
354 357 3.006940 GCATGAACTCGTATTTGGTCCA 58.993 45.455 0.00 0.00 0.00 4.02
578 592 6.265577 AGAAACTACATTTGACACAAAGCAC 58.734 36.000 0.00 0.00 0.00 4.40
740 755 2.350863 ACCTTTGGGTCCTCTCATCT 57.649 50.000 0.00 0.00 43.38 2.90
782 797 5.895636 TTGTGATATTTTGGCTACACAGG 57.104 39.130 0.00 0.00 38.96 4.00
786 801 6.753180 TGCTTTTTGTGATATTTTGGCTACA 58.247 32.000 0.00 0.00 0.00 2.74
954 970 2.359850 GCAGCATCACCCCAACGA 60.360 61.111 0.00 0.00 0.00 3.85
1025 1041 7.048512 GCTAGCTAATGGTTCTTCTTTTCCTA 58.951 38.462 7.70 0.00 0.00 2.94
1060 1076 2.064762 CTTGTCAAGCTCGAGAACCTG 58.935 52.381 18.75 6.87 0.00 4.00
1316 1334 2.739913 CAATTTTTCCATGTGCAGCAGG 59.260 45.455 0.00 0.00 0.00 4.85
1381 1402 0.110238 CGGAATTCGTGCTTGTGTGG 60.110 55.000 0.00 0.00 0.00 4.17
1479 1500 2.230508 CGTTGAGCTTAGTGGACCACTA 59.769 50.000 27.31 27.31 43.46 2.74
1489 1510 1.272781 CGCTTCTCCGTTGAGCTTAG 58.727 55.000 0.00 0.00 38.58 2.18
1508 1529 1.305718 ACTCAGGGGTGCTCTCTCC 60.306 63.158 0.00 0.00 0.00 3.71
1517 1538 1.203025 ACGTCTAGTTCACTCAGGGGT 60.203 52.381 0.00 0.00 0.00 4.95
1575 1597 1.817099 CCTCATGTGCTCCTTCCGC 60.817 63.158 0.00 0.00 0.00 5.54
1676 1707 3.049674 CAACTGCGACCATGGCGT 61.050 61.111 23.32 2.60 0.00 5.68
1776 1807 1.512735 GGATAAGGCCAGGGAGACTT 58.487 55.000 5.01 0.00 0.00 3.01
1777 1808 0.400670 GGGATAAGGCCAGGGAGACT 60.401 60.000 5.01 0.00 0.00 3.24
1792 1823 2.363276 TCACCGGCTACGTGGGAT 60.363 61.111 0.00 0.00 38.78 3.85
1994 2026 4.720902 CCACCCATGGCGCTGTCA 62.721 66.667 6.09 0.00 39.82 3.58
2093 2125 0.831288 CTCTCTGGATCCCATCGCCT 60.831 60.000 9.90 0.00 30.82 5.52
2109 2141 2.366972 CCCCGATCCCCAACCTCT 60.367 66.667 0.00 0.00 0.00 3.69
2147 2179 4.712425 CACGACCGACGACCACCC 62.712 72.222 0.00 0.00 45.77 4.61
2227 2259 0.468226 CAGCGGCCCCTGTATAGAAA 59.532 55.000 9.41 0.00 0.00 2.52
2233 2267 2.687200 ATCACAGCGGCCCCTGTA 60.687 61.111 22.46 11.59 43.85 2.74
2235 2269 1.971505 TTAGATCACAGCGGCCCCTG 61.972 60.000 16.10 16.10 38.78 4.45
2240 2274 6.647067 AGAATAGTTATTTAGATCACAGCGGC 59.353 38.462 0.00 0.00 0.00 6.53
2291 2341 9.421399 TCTTTTGCGAGGATCAGGATATATATA 57.579 33.333 0.00 0.00 33.17 0.86
2292 2342 8.200792 GTCTTTTGCGAGGATCAGGATATATAT 58.799 37.037 0.00 0.00 33.17 0.86
2293 2343 7.178451 TGTCTTTTGCGAGGATCAGGATATATA 59.822 37.037 0.00 0.00 33.17 0.86
2294 2344 6.014242 TGTCTTTTGCGAGGATCAGGATATAT 60.014 38.462 0.00 0.00 33.17 0.86
2295 2345 5.304357 TGTCTTTTGCGAGGATCAGGATATA 59.696 40.000 0.00 0.00 33.17 0.86
2296 2346 4.101585 TGTCTTTTGCGAGGATCAGGATAT 59.898 41.667 0.00 0.00 33.17 1.63
2297 2347 3.450817 TGTCTTTTGCGAGGATCAGGATA 59.549 43.478 0.00 0.00 33.17 2.59
2298 2348 2.237143 TGTCTTTTGCGAGGATCAGGAT 59.763 45.455 0.00 0.00 33.17 3.24
2299 2349 1.623311 TGTCTTTTGCGAGGATCAGGA 59.377 47.619 0.00 0.00 33.17 3.86
2300 2350 2.005451 CTGTCTTTTGCGAGGATCAGG 58.995 52.381 0.00 0.00 33.17 3.86
2301 2351 2.005451 CCTGTCTTTTGCGAGGATCAG 58.995 52.381 0.00 0.00 33.17 2.90
2302 2352 1.623311 TCCTGTCTTTTGCGAGGATCA 59.377 47.619 0.00 0.00 33.17 2.92
2303 2353 2.386661 TCCTGTCTTTTGCGAGGATC 57.613 50.000 0.00 0.00 29.25 3.36
2304 2354 2.503356 AGATCCTGTCTTTTGCGAGGAT 59.497 45.455 0.00 0.00 46.11 3.24
2305 2355 1.902508 AGATCCTGTCTTTTGCGAGGA 59.097 47.619 0.00 0.00 38.97 3.71
2306 2356 2.393271 AGATCCTGTCTTTTGCGAGG 57.607 50.000 0.00 0.00 31.47 4.63
2315 2365 0.888619 TCGCGACAAAGATCCTGTCT 59.111 50.000 18.50 0.00 40.90 3.41
2316 2366 1.927895 ATCGCGACAAAGATCCTGTC 58.072 50.000 12.93 13.25 39.89 3.51
2317 2367 2.386661 AATCGCGACAAAGATCCTGT 57.613 45.000 12.93 0.00 0.00 4.00
2318 2368 4.051237 TCATAATCGCGACAAAGATCCTG 58.949 43.478 12.93 0.00 0.00 3.86
2319 2369 4.322080 TCATAATCGCGACAAAGATCCT 57.678 40.909 12.93 0.00 0.00 3.24
2320 2370 4.092091 GGATCATAATCGCGACAAAGATCC 59.908 45.833 30.02 30.02 42.21 3.36
2321 2371 4.926238 AGGATCATAATCGCGACAAAGATC 59.074 41.667 23.95 23.95 32.24 2.75
2322 2372 4.887748 AGGATCATAATCGCGACAAAGAT 58.112 39.130 12.93 13.35 32.24 2.40
2323 2373 4.299155 GAGGATCATAATCGCGACAAAGA 58.701 43.478 12.93 8.41 32.24 2.52
2324 2374 3.430218 GGAGGATCATAATCGCGACAAAG 59.570 47.826 12.93 1.96 36.25 2.77
2325 2375 3.390135 GGAGGATCATAATCGCGACAAA 58.610 45.455 12.93 0.00 36.25 2.83
2326 2376 2.607038 CGGAGGATCATAATCGCGACAA 60.607 50.000 12.93 1.86 36.25 3.18
2327 2377 1.068541 CGGAGGATCATAATCGCGACA 60.069 52.381 12.93 1.85 36.25 4.35
2328 2378 1.199327 TCGGAGGATCATAATCGCGAC 59.801 52.381 12.93 0.00 36.25 5.19
2329 2379 1.199327 GTCGGAGGATCATAATCGCGA 59.801 52.381 13.09 13.09 36.25 5.87
2330 2380 1.200252 AGTCGGAGGATCATAATCGCG 59.800 52.381 0.00 0.00 36.25 5.87
2331 2381 2.229062 TCAGTCGGAGGATCATAATCGC 59.771 50.000 0.00 0.00 36.25 4.58
2332 2382 4.216472 TCTTCAGTCGGAGGATCATAATCG 59.784 45.833 0.00 0.00 36.25 3.34
2333 2383 5.708948 CTCTTCAGTCGGAGGATCATAATC 58.291 45.833 0.00 0.00 36.25 1.75
2334 2384 4.021544 GCTCTTCAGTCGGAGGATCATAAT 60.022 45.833 0.00 0.00 36.25 1.28
2335 2385 3.319405 GCTCTTCAGTCGGAGGATCATAA 59.681 47.826 0.00 0.00 36.25 1.90
2336 2386 2.887783 GCTCTTCAGTCGGAGGATCATA 59.112 50.000 0.00 0.00 36.25 2.15
2337 2387 1.686052 GCTCTTCAGTCGGAGGATCAT 59.314 52.381 0.00 0.00 36.25 2.45
2338 2388 1.107114 GCTCTTCAGTCGGAGGATCA 58.893 55.000 0.00 0.00 36.25 2.92
2339 2389 1.107114 TGCTCTTCAGTCGGAGGATC 58.893 55.000 0.00 0.00 30.39 3.36
2340 2390 1.480137 CTTGCTCTTCAGTCGGAGGAT 59.520 52.381 0.00 0.00 30.39 3.24
2341 2391 0.891373 CTTGCTCTTCAGTCGGAGGA 59.109 55.000 0.00 0.00 0.00 3.71
2342 2392 0.891373 TCTTGCTCTTCAGTCGGAGG 59.109 55.000 0.00 0.00 0.00 4.30
2343 2393 1.270826 TGTCTTGCTCTTCAGTCGGAG 59.729 52.381 0.00 0.00 0.00 4.63
2344 2394 1.270826 CTGTCTTGCTCTTCAGTCGGA 59.729 52.381 0.00 0.00 0.00 4.55
2345 2395 1.000283 ACTGTCTTGCTCTTCAGTCGG 60.000 52.381 0.00 0.00 36.59 4.79
2346 2396 2.057316 CACTGTCTTGCTCTTCAGTCG 58.943 52.381 0.00 0.00 38.79 4.18
2347 2397 2.036475 TCCACTGTCTTGCTCTTCAGTC 59.964 50.000 0.00 0.00 38.79 3.51
2348 2398 2.042464 TCCACTGTCTTGCTCTTCAGT 58.958 47.619 0.00 0.00 41.02 3.41
2349 2399 2.411904 GTCCACTGTCTTGCTCTTCAG 58.588 52.381 0.00 0.00 0.00 3.02
2350 2400 1.269778 CGTCCACTGTCTTGCTCTTCA 60.270 52.381 0.00 0.00 0.00 3.02
2351 2401 1.269831 ACGTCCACTGTCTTGCTCTTC 60.270 52.381 0.00 0.00 0.00 2.87
2352 2402 0.753262 ACGTCCACTGTCTTGCTCTT 59.247 50.000 0.00 0.00 0.00 2.85
2353 2403 0.315568 GACGTCCACTGTCTTGCTCT 59.684 55.000 3.51 0.00 33.54 4.09
2354 2404 0.667792 GGACGTCCACTGTCTTGCTC 60.668 60.000 29.75 0.00 36.58 4.26
2355 2405 1.115930 AGGACGTCCACTGTCTTGCT 61.116 55.000 35.00 8.65 38.89 3.91
2356 2406 0.667792 GAGGACGTCCACTGTCTTGC 60.668 60.000 35.00 9.54 38.89 4.01
2357 2407 0.387367 CGAGGACGTCCACTGTCTTG 60.387 60.000 35.00 14.23 38.89 3.02
2358 2408 0.536687 TCGAGGACGTCCACTGTCTT 60.537 55.000 35.00 13.86 40.69 3.01
2359 2409 0.322636 ATCGAGGACGTCCACTGTCT 60.323 55.000 35.00 14.66 40.69 3.41
2360 2410 0.099082 GATCGAGGACGTCCACTGTC 59.901 60.000 35.00 23.15 40.69 3.51
2361 2411 0.608308 TGATCGAGGACGTCCACTGT 60.608 55.000 35.00 19.63 40.69 3.55
2362 2412 0.741326 ATGATCGAGGACGTCCACTG 59.259 55.000 35.00 23.19 40.69 3.66
2363 2413 1.025812 GATGATCGAGGACGTCCACT 58.974 55.000 35.00 17.11 40.69 4.00
2364 2414 0.030908 GGATGATCGAGGACGTCCAC 59.969 60.000 35.00 27.88 40.64 4.02
2365 2415 0.106669 AGGATGATCGAGGACGTCCA 60.107 55.000 35.00 16.57 42.62 4.02
2366 2416 1.001158 GAAGGATGATCGAGGACGTCC 60.001 57.143 27.67 27.67 41.08 4.79
2367 2417 1.950909 AGAAGGATGATCGAGGACGTC 59.049 52.381 7.13 7.13 40.69 4.34
2368 2418 1.950909 GAGAAGGATGATCGAGGACGT 59.049 52.381 0.00 0.00 40.69 4.34
2369 2419 1.268352 GGAGAAGGATGATCGAGGACG 59.732 57.143 0.00 0.00 41.26 4.79
2370 2420 2.311463 TGGAGAAGGATGATCGAGGAC 58.689 52.381 0.00 0.00 0.00 3.85
2371 2421 2.755952 TGGAGAAGGATGATCGAGGA 57.244 50.000 0.00 0.00 0.00 3.71
2372 2422 2.896044 TCATGGAGAAGGATGATCGAGG 59.104 50.000 0.00 0.00 0.00 4.63
2373 2423 3.573538 AGTCATGGAGAAGGATGATCGAG 59.426 47.826 0.00 0.00 31.40 4.04
2374 2424 3.570540 AGTCATGGAGAAGGATGATCGA 58.429 45.455 0.00 0.00 31.40 3.59
2375 2425 4.522405 ACTAGTCATGGAGAAGGATGATCG 59.478 45.833 0.00 0.00 31.40 3.69
2376 2426 6.222389 CAACTAGTCATGGAGAAGGATGATC 58.778 44.000 0.00 0.00 31.40 2.92
2377 2427 5.071519 CCAACTAGTCATGGAGAAGGATGAT 59.928 44.000 7.73 0.00 39.12 2.45
2378 2428 4.406972 CCAACTAGTCATGGAGAAGGATGA 59.593 45.833 7.73 0.00 39.12 2.92
2379 2429 4.163078 ACCAACTAGTCATGGAGAAGGATG 59.837 45.833 18.59 0.00 39.12 3.51
2380 2430 4.163078 CACCAACTAGTCATGGAGAAGGAT 59.837 45.833 18.59 0.00 39.12 3.24
2381 2431 3.515502 CACCAACTAGTCATGGAGAAGGA 59.484 47.826 18.59 0.00 39.12 3.36
2382 2432 3.369892 CCACCAACTAGTCATGGAGAAGG 60.370 52.174 18.59 11.02 39.12 3.46
2383 2433 3.261897 ACCACCAACTAGTCATGGAGAAG 59.738 47.826 18.59 7.64 39.12 2.85
2384 2434 3.248024 ACCACCAACTAGTCATGGAGAA 58.752 45.455 18.59 0.00 39.12 2.87
2385 2435 2.902608 ACCACCAACTAGTCATGGAGA 58.097 47.619 18.59 0.00 39.12 3.71
2386 2436 4.504858 GTTACCACCAACTAGTCATGGAG 58.495 47.826 18.59 11.40 39.12 3.86
2387 2437 3.262405 GGTTACCACCAACTAGTCATGGA 59.738 47.826 18.59 4.89 43.61 3.41
2388 2438 3.606687 GGTTACCACCAACTAGTCATGG 58.393 50.000 11.41 11.41 43.61 3.66
2400 2450 4.756135 TCGAATGTACTTTTGGTTACCACC 59.244 41.667 2.39 0.00 44.56 4.61
2401 2451 5.927954 TCGAATGTACTTTTGGTTACCAC 57.072 39.130 2.39 0.00 30.78 4.16
2402 2452 7.879160 ACTAATCGAATGTACTTTTGGTTACCA 59.121 33.333 0.00 0.00 0.00 3.25
2403 2453 8.173130 CACTAATCGAATGTACTTTTGGTTACC 58.827 37.037 9.38 0.00 0.00 2.85
2404 2454 8.715088 ACACTAATCGAATGTACTTTTGGTTAC 58.285 33.333 9.38 0.00 0.00 2.50
2405 2455 8.836268 ACACTAATCGAATGTACTTTTGGTTA 57.164 30.769 11.86 11.86 0.00 2.85
2406 2456 7.739498 ACACTAATCGAATGTACTTTTGGTT 57.261 32.000 11.01 11.01 0.00 3.67
2407 2457 7.739498 AACACTAATCGAATGTACTTTTGGT 57.261 32.000 8.47 0.00 0.00 3.67
2408 2458 8.073768 ACAAACACTAATCGAATGTACTTTTGG 58.926 33.333 8.47 0.00 0.00 3.28
2413 2463 8.879759 CCATTACAAACACTAATCGAATGTACT 58.120 33.333 0.00 0.00 0.00 2.73
2414 2464 8.875803 TCCATTACAAACACTAATCGAATGTAC 58.124 33.333 0.00 0.00 0.00 2.90
2415 2465 9.093970 CTCCATTACAAACACTAATCGAATGTA 57.906 33.333 0.00 0.00 0.00 2.29
2416 2466 7.606456 ACTCCATTACAAACACTAATCGAATGT 59.394 33.333 0.00 0.00 0.00 2.71
2417 2467 7.974675 ACTCCATTACAAACACTAATCGAATG 58.025 34.615 0.00 0.00 0.00 2.67
2418 2468 9.314321 CTACTCCATTACAAACACTAATCGAAT 57.686 33.333 0.00 0.00 0.00 3.34
2419 2469 8.525316 TCTACTCCATTACAAACACTAATCGAA 58.475 33.333 0.00 0.00 0.00 3.71
2420 2470 8.058667 TCTACTCCATTACAAACACTAATCGA 57.941 34.615 0.00 0.00 0.00 3.59
2421 2471 8.697846 TTCTACTCCATTACAAACACTAATCG 57.302 34.615 0.00 0.00 0.00 3.34
2425 2475 9.595823 GCTTATTCTACTCCATTACAAACACTA 57.404 33.333 0.00 0.00 0.00 2.74
2426 2476 8.100791 TGCTTATTCTACTCCATTACAAACACT 58.899 33.333 0.00 0.00 0.00 3.55
2427 2477 8.175716 GTGCTTATTCTACTCCATTACAAACAC 58.824 37.037 0.00 0.00 0.00 3.32
2428 2478 7.880713 TGTGCTTATTCTACTCCATTACAAACA 59.119 33.333 0.00 0.00 0.00 2.83
2429 2479 8.263940 TGTGCTTATTCTACTCCATTACAAAC 57.736 34.615 0.00 0.00 0.00 2.93
2430 2480 8.318412 TCTGTGCTTATTCTACTCCATTACAAA 58.682 33.333 0.00 0.00 0.00 2.83
2431 2481 7.764443 GTCTGTGCTTATTCTACTCCATTACAA 59.236 37.037 0.00 0.00 0.00 2.41
2432 2482 7.265673 GTCTGTGCTTATTCTACTCCATTACA 58.734 38.462 0.00 0.00 0.00 2.41
2433 2483 6.418226 CGTCTGTGCTTATTCTACTCCATTAC 59.582 42.308 0.00 0.00 0.00 1.89
2434 2484 6.320418 TCGTCTGTGCTTATTCTACTCCATTA 59.680 38.462 0.00 0.00 0.00 1.90
2435 2485 5.127194 TCGTCTGTGCTTATTCTACTCCATT 59.873 40.000 0.00 0.00 0.00 3.16
2436 2486 4.645136 TCGTCTGTGCTTATTCTACTCCAT 59.355 41.667 0.00 0.00 0.00 3.41
2437 2487 4.014406 TCGTCTGTGCTTATTCTACTCCA 58.986 43.478 0.00 0.00 0.00 3.86
2438 2488 4.634184 TCGTCTGTGCTTATTCTACTCC 57.366 45.455 0.00 0.00 0.00 3.85
2439 2489 5.396947 CGATTCGTCTGTGCTTATTCTACTC 59.603 44.000 0.00 0.00 0.00 2.59
2440 2490 5.066117 TCGATTCGTCTGTGCTTATTCTACT 59.934 40.000 5.89 0.00 0.00 2.57
2441 2491 5.271625 TCGATTCGTCTGTGCTTATTCTAC 58.728 41.667 5.89 0.00 0.00 2.59
2442 2492 5.494632 TCGATTCGTCTGTGCTTATTCTA 57.505 39.130 5.89 0.00 0.00 2.10
2443 2493 4.371855 TCGATTCGTCTGTGCTTATTCT 57.628 40.909 5.89 0.00 0.00 2.40
2444 2494 5.450376 TTTCGATTCGTCTGTGCTTATTC 57.550 39.130 5.89 0.00 0.00 1.75
2445 2495 5.812642 AGATTTCGATTCGTCTGTGCTTATT 59.187 36.000 5.89 0.00 0.00 1.40
2446 2496 5.352284 AGATTTCGATTCGTCTGTGCTTAT 58.648 37.500 5.89 0.00 0.00 1.73
2447 2497 4.744570 AGATTTCGATTCGTCTGTGCTTA 58.255 39.130 5.89 0.00 0.00 3.09
2448 2498 3.589988 AGATTTCGATTCGTCTGTGCTT 58.410 40.909 5.89 0.00 0.00 3.91
2449 2499 3.238108 AGATTTCGATTCGTCTGTGCT 57.762 42.857 5.89 0.00 0.00 4.40
2450 2500 3.999229 AAGATTTCGATTCGTCTGTGC 57.001 42.857 5.89 0.00 0.00 4.57
2451 2501 4.267928 GGGTAAGATTTCGATTCGTCTGTG 59.732 45.833 5.89 0.00 0.00 3.66
2452 2502 4.081862 TGGGTAAGATTTCGATTCGTCTGT 60.082 41.667 5.89 0.00 0.00 3.41
2453 2503 4.430007 TGGGTAAGATTTCGATTCGTCTG 58.570 43.478 5.89 0.00 0.00 3.51
2454 2504 4.730949 TGGGTAAGATTTCGATTCGTCT 57.269 40.909 5.89 0.00 0.00 4.18
2455 2505 5.522460 TGAATGGGTAAGATTTCGATTCGTC 59.478 40.000 5.89 0.00 0.00 4.20
2456 2506 5.424757 TGAATGGGTAAGATTTCGATTCGT 58.575 37.500 5.89 0.00 0.00 3.85
2457 2507 5.984233 TGAATGGGTAAGATTTCGATTCG 57.016 39.130 0.00 0.00 0.00 3.34
2458 2508 8.507249 CCTATTGAATGGGTAAGATTTCGATTC 58.493 37.037 0.00 0.00 0.00 2.52
2459 2509 7.448469 CCCTATTGAATGGGTAAGATTTCGATT 59.552 37.037 6.82 0.00 38.65 3.34
2460 2510 6.942576 CCCTATTGAATGGGTAAGATTTCGAT 59.057 38.462 6.82 0.00 38.65 3.59
2461 2511 6.296026 CCCTATTGAATGGGTAAGATTTCGA 58.704 40.000 6.82 0.00 38.65 3.71
2462 2512 5.473504 CCCCTATTGAATGGGTAAGATTTCG 59.526 44.000 6.82 0.00 41.82 3.46
2463 2513 6.901081 CCCCTATTGAATGGGTAAGATTTC 57.099 41.667 6.82 0.00 41.82 2.17
2472 2522 3.943671 TGTACACCCCTATTGAATGGG 57.056 47.619 0.00 0.00 45.34 4.00
2473 2523 4.141274 TCCATGTACACCCCTATTGAATGG 60.141 45.833 0.00 0.00 34.62 3.16
2474 2524 5.047566 TCCATGTACACCCCTATTGAATG 57.952 43.478 0.00 0.00 0.00 2.67
2475 2525 5.725551 TTCCATGTACACCCCTATTGAAT 57.274 39.130 0.00 0.00 0.00 2.57
2476 2526 5.725551 ATTCCATGTACACCCCTATTGAA 57.274 39.130 0.00 0.00 0.00 2.69
2477 2527 6.042781 GTCTATTCCATGTACACCCCTATTGA 59.957 42.308 0.00 0.00 0.00 2.57
2478 2528 6.231211 GTCTATTCCATGTACACCCCTATTG 58.769 44.000 0.00 0.00 0.00 1.90
2479 2529 5.309806 GGTCTATTCCATGTACACCCCTATT 59.690 44.000 0.00 0.00 0.00 1.73
2480 2530 4.844655 GGTCTATTCCATGTACACCCCTAT 59.155 45.833 0.00 0.00 0.00 2.57
2481 2531 4.078219 AGGTCTATTCCATGTACACCCCTA 60.078 45.833 0.00 0.00 0.00 3.53
2482 2532 3.046374 GGTCTATTCCATGTACACCCCT 58.954 50.000 0.00 0.00 0.00 4.79
2483 2533 3.046374 AGGTCTATTCCATGTACACCCC 58.954 50.000 0.00 0.00 0.00 4.95
2484 2534 3.071167 GGAGGTCTATTCCATGTACACCC 59.929 52.174 0.00 0.00 34.74 4.61
2485 2535 3.071167 GGGAGGTCTATTCCATGTACACC 59.929 52.174 0.00 0.00 36.40 4.16
2486 2536 3.243771 CGGGAGGTCTATTCCATGTACAC 60.244 52.174 0.00 0.00 36.40 2.90
2487 2537 2.963101 CGGGAGGTCTATTCCATGTACA 59.037 50.000 0.00 0.00 36.40 2.90
2488 2538 2.963782 ACGGGAGGTCTATTCCATGTAC 59.036 50.000 0.00 0.00 36.40 2.90
2489 2539 3.228453 GACGGGAGGTCTATTCCATGTA 58.772 50.000 0.00 0.00 42.62 2.29
2490 2540 2.040178 GACGGGAGGTCTATTCCATGT 58.960 52.381 0.00 0.00 42.62 3.21
2491 2541 2.036475 CTGACGGGAGGTCTATTCCATG 59.964 54.545 0.00 0.00 46.24 3.66
2492 2542 2.320781 CTGACGGGAGGTCTATTCCAT 58.679 52.381 0.00 0.00 46.24 3.41
2493 2543 1.006758 ACTGACGGGAGGTCTATTCCA 59.993 52.381 0.00 0.00 46.24 3.53
2494 2544 1.777941 ACTGACGGGAGGTCTATTCC 58.222 55.000 0.00 0.00 46.24 3.01
2495 2545 3.889520 AAACTGACGGGAGGTCTATTC 57.110 47.619 0.00 0.00 46.24 1.75
2496 2546 4.081254 GGTTAAACTGACGGGAGGTCTATT 60.081 45.833 0.00 0.00 46.24 1.73
2497 2547 3.450096 GGTTAAACTGACGGGAGGTCTAT 59.550 47.826 0.00 0.00 46.24 1.98
2498 2548 2.827921 GGTTAAACTGACGGGAGGTCTA 59.172 50.000 0.00 0.00 46.24 2.59
2499 2549 1.622312 GGTTAAACTGACGGGAGGTCT 59.378 52.381 0.00 0.00 46.24 3.85
2500 2550 1.670967 CGGTTAAACTGACGGGAGGTC 60.671 57.143 0.00 0.00 46.27 3.85
2501 2551 0.319405 CGGTTAAACTGACGGGAGGT 59.681 55.000 0.00 0.00 0.00 3.85
2502 2552 0.390735 CCGGTTAAACTGACGGGAGG 60.391 60.000 0.00 0.00 42.48 4.30
2503 2553 0.604578 TCCGGTTAAACTGACGGGAG 59.395 55.000 0.00 0.00 45.97 4.30
2504 2554 0.604578 CTCCGGTTAAACTGACGGGA 59.395 55.000 0.00 1.88 45.97 5.14
2505 2555 0.604578 TCTCCGGTTAAACTGACGGG 59.395 55.000 0.00 0.00 45.97 5.28
2507 2557 3.387397 ACTTTCTCCGGTTAAACTGACG 58.613 45.455 0.00 0.00 0.00 4.35
2508 2558 4.629092 AGACTTTCTCCGGTTAAACTGAC 58.371 43.478 0.00 0.00 0.00 3.51
2509 2559 4.950205 AGACTTTCTCCGGTTAAACTGA 57.050 40.909 0.00 0.00 0.00 3.41
2510 2560 5.298347 AGAAGACTTTCTCCGGTTAAACTG 58.702 41.667 0.00 0.00 39.46 3.16
2511 2561 5.548181 AGAAGACTTTCTCCGGTTAAACT 57.452 39.130 0.00 0.00 39.46 2.66
2512 2562 6.615264 AAAGAAGACTTTCTCCGGTTAAAC 57.385 37.500 0.00 0.00 42.80 2.01
2513 2563 7.466320 CGAAAAAGAAGACTTTCTCCGGTTAAA 60.466 37.037 0.00 2.40 44.32 1.52
2514 2564 6.018507 CGAAAAAGAAGACTTTCTCCGGTTAA 60.019 38.462 0.00 0.00 44.32 2.01
2515 2565 5.464389 CGAAAAAGAAGACTTTCTCCGGTTA 59.536 40.000 0.00 0.00 44.32 2.85
2516 2566 4.272748 CGAAAAAGAAGACTTTCTCCGGTT 59.727 41.667 0.00 0.00 44.32 4.44
2517 2567 3.808174 CGAAAAAGAAGACTTTCTCCGGT 59.192 43.478 0.00 0.00 44.32 5.28
2518 2568 3.364068 GCGAAAAAGAAGACTTTCTCCGG 60.364 47.826 0.00 0.00 44.32 5.14
2519 2569 3.364068 GGCGAAAAAGAAGACTTTCTCCG 60.364 47.826 0.00 0.00 44.32 4.63
2520 2570 3.058155 GGGCGAAAAAGAAGACTTTCTCC 60.058 47.826 0.00 0.00 44.32 3.71
2521 2571 3.815962 AGGGCGAAAAAGAAGACTTTCTC 59.184 43.478 0.00 0.00 44.32 2.87
2522 2572 3.821748 AGGGCGAAAAAGAAGACTTTCT 58.178 40.909 0.00 0.00 44.32 2.52
2523 2573 4.202020 ACAAGGGCGAAAAAGAAGACTTTC 60.202 41.667 0.00 0.00 44.32 2.62
2524 2574 3.699538 ACAAGGGCGAAAAAGAAGACTTT 59.300 39.130 0.00 0.00 46.64 2.66
2525 2575 3.288092 ACAAGGGCGAAAAAGAAGACTT 58.712 40.909 0.00 0.00 38.05 3.01
2526 2576 2.932261 ACAAGGGCGAAAAAGAAGACT 58.068 42.857 0.00 0.00 0.00 3.24
2527 2577 5.873164 TCTATACAAGGGCGAAAAAGAAGAC 59.127 40.000 0.00 0.00 0.00 3.01
2528 2578 6.045072 TCTATACAAGGGCGAAAAAGAAGA 57.955 37.500 0.00 0.00 0.00 2.87
2529 2579 6.292381 CGATCTATACAAGGGCGAAAAAGAAG 60.292 42.308 0.00 0.00 0.00 2.85
2530 2580 5.522460 CGATCTATACAAGGGCGAAAAAGAA 59.478 40.000 0.00 0.00 0.00 2.52
2531 2581 5.047847 CGATCTATACAAGGGCGAAAAAGA 58.952 41.667 0.00 0.00 0.00 2.52
2532 2582 4.211374 CCGATCTATACAAGGGCGAAAAAG 59.789 45.833 0.00 0.00 0.00 2.27
2533 2583 4.124238 CCGATCTATACAAGGGCGAAAAA 58.876 43.478 0.00 0.00 0.00 1.94
2534 2584 3.724374 CCGATCTATACAAGGGCGAAAA 58.276 45.455 0.00 0.00 0.00 2.29
2535 2585 2.547218 GCCGATCTATACAAGGGCGAAA 60.547 50.000 0.00 0.00 0.00 3.46
2536 2586 1.000506 GCCGATCTATACAAGGGCGAA 59.999 52.381 0.00 0.00 0.00 4.70
2537 2587 0.601558 GCCGATCTATACAAGGGCGA 59.398 55.000 0.00 0.00 0.00 5.54
2538 2588 0.389948 GGCCGATCTATACAAGGGCG 60.390 60.000 0.00 0.00 41.40 6.13
2539 2589 0.685097 TGGCCGATCTATACAAGGGC 59.315 55.000 0.00 0.00 46.21 5.19
2540 2590 3.485463 TTTGGCCGATCTATACAAGGG 57.515 47.619 0.00 0.00 0.00 3.95
2541 2591 5.530915 TCAATTTTGGCCGATCTATACAAGG 59.469 40.000 0.00 0.00 0.00 3.61
2542 2592 6.618287 TCAATTTTGGCCGATCTATACAAG 57.382 37.500 0.00 0.00 0.00 3.16
2543 2593 7.122055 AGTTTCAATTTTGGCCGATCTATACAA 59.878 33.333 0.00 0.00 0.00 2.41
2544 2594 6.601613 AGTTTCAATTTTGGCCGATCTATACA 59.398 34.615 0.00 0.00 0.00 2.29
2545 2595 7.027778 AGTTTCAATTTTGGCCGATCTATAC 57.972 36.000 0.00 0.00 0.00 1.47
2546 2596 7.990886 ACTAGTTTCAATTTTGGCCGATCTATA 59.009 33.333 0.00 0.00 0.00 1.31
2547 2597 6.828785 ACTAGTTTCAATTTTGGCCGATCTAT 59.171 34.615 0.00 0.00 0.00 1.98
2548 2598 6.177610 ACTAGTTTCAATTTTGGCCGATCTA 58.822 36.000 0.00 0.00 0.00 1.98
2549 2599 5.010282 ACTAGTTTCAATTTTGGCCGATCT 58.990 37.500 0.00 0.00 0.00 2.75
2550 2600 5.310720 ACTAGTTTCAATTTTGGCCGATC 57.689 39.130 0.00 0.00 0.00 3.69
2551 2601 5.619086 CGAACTAGTTTCAATTTTGGCCGAT 60.619 40.000 10.02 0.00 33.24 4.18
2552 2602 4.319911 CGAACTAGTTTCAATTTTGGCCGA 60.320 41.667 10.02 0.00 33.24 5.54
2553 2603 3.911964 CGAACTAGTTTCAATTTTGGCCG 59.088 43.478 10.02 0.10 33.24 6.13
2554 2604 4.234574 CCGAACTAGTTTCAATTTTGGCC 58.765 43.478 10.02 0.00 33.24 5.36
2555 2605 4.866921 ACCGAACTAGTTTCAATTTTGGC 58.133 39.130 10.02 0.00 33.24 4.52
2556 2606 5.689961 CCAACCGAACTAGTTTCAATTTTGG 59.310 40.000 10.02 12.25 33.24 3.28
2557 2607 5.689961 CCCAACCGAACTAGTTTCAATTTTG 59.310 40.000 10.02 7.70 33.24 2.44
2558 2608 5.221362 CCCCAACCGAACTAGTTTCAATTTT 60.221 40.000 10.02 0.00 33.24 1.82
2559 2609 4.279922 CCCCAACCGAACTAGTTTCAATTT 59.720 41.667 10.02 0.00 33.24 1.82
2560 2610 3.824443 CCCCAACCGAACTAGTTTCAATT 59.176 43.478 10.02 0.00 33.24 2.32
2561 2611 3.181437 ACCCCAACCGAACTAGTTTCAAT 60.181 43.478 10.02 0.00 33.24 2.57
2562 2612 2.173143 ACCCCAACCGAACTAGTTTCAA 59.827 45.455 10.02 0.00 33.24 2.69
2563 2613 1.770061 ACCCCAACCGAACTAGTTTCA 59.230 47.619 10.02 0.00 33.24 2.69
2564 2614 2.556144 ACCCCAACCGAACTAGTTTC 57.444 50.000 10.02 2.52 0.00 2.78
2565 2615 3.054875 GGATACCCCAACCGAACTAGTTT 60.055 47.826 10.02 0.00 34.14 2.66
2566 2616 2.502947 GGATACCCCAACCGAACTAGTT 59.497 50.000 8.13 8.13 34.14 2.24
2567 2617 2.113807 GGATACCCCAACCGAACTAGT 58.886 52.381 0.00 0.00 34.14 2.57
2568 2618 2.904697 GGATACCCCAACCGAACTAG 57.095 55.000 0.00 0.00 34.14 2.57
2574 2624 2.502577 GTCCGGATACCCCAACCG 59.497 66.667 7.81 0.00 45.24 4.44
2575 2625 2.913501 GGTCCGGATACCCCAACC 59.086 66.667 7.81 0.00 34.44 3.77
2581 2631 3.925090 CGGCAGGGTCCGGATACC 61.925 72.222 17.80 17.80 45.38 2.73
2588 2638 1.079336 GTTACAGACGGCAGGGTCC 60.079 63.158 0.00 0.00 37.66 4.46
2589 2639 4.592426 GTTACAGACGGCAGGGTC 57.408 61.111 0.00 0.00 37.19 4.46
2606 2656 1.586564 GAGAAGACGACGCATCCCG 60.587 63.158 0.00 0.00 44.21 5.14
2607 2657 1.227002 GGAGAAGACGACGCATCCC 60.227 63.158 0.00 0.00 0.00 3.85
2608 2658 0.103208 ATGGAGAAGACGACGCATCC 59.897 55.000 0.00 0.00 0.00 3.51
2609 2659 1.927895 AATGGAGAAGACGACGCATC 58.072 50.000 0.00 0.00 0.00 3.91
2610 2660 3.735237 ATAATGGAGAAGACGACGCAT 57.265 42.857 0.00 0.00 0.00 4.73
2611 2661 4.142337 TGTTATAATGGAGAAGACGACGCA 60.142 41.667 0.00 0.00 0.00 5.24
2612 2662 4.206609 GTGTTATAATGGAGAAGACGACGC 59.793 45.833 0.00 0.00 0.00 5.19
2613 2663 5.337554 TGTGTTATAATGGAGAAGACGACG 58.662 41.667 0.00 0.00 0.00 5.12
2614 2664 7.772332 ATTGTGTTATAATGGAGAAGACGAC 57.228 36.000 0.00 0.00 0.00 4.34
2615 2665 9.878667 TTTATTGTGTTATAATGGAGAAGACGA 57.121 29.630 0.00 0.00 0.00 4.20
2631 2681 9.574516 AATCCAGAGTAACTTCTTTATTGTGTT 57.425 29.630 0.00 0.00 0.00 3.32
2632 2682 9.003658 CAATCCAGAGTAACTTCTTTATTGTGT 57.996 33.333 0.00 0.00 29.95 3.72
2633 2683 9.219603 TCAATCCAGAGTAACTTCTTTATTGTG 57.780 33.333 0.00 0.00 33.07 3.33
2634 2684 9.793259 TTCAATCCAGAGTAACTTCTTTATTGT 57.207 29.630 0.00 0.00 33.07 2.71
2637 2687 9.883142 CTCTTCAATCCAGAGTAACTTCTTTAT 57.117 33.333 0.00 0.00 34.18 1.40
2638 2688 8.314751 CCTCTTCAATCCAGAGTAACTTCTTTA 58.685 37.037 0.00 0.00 36.75 1.85
2639 2689 7.164803 CCTCTTCAATCCAGAGTAACTTCTTT 58.835 38.462 0.00 0.00 36.75 2.52
2640 2690 6.706295 CCTCTTCAATCCAGAGTAACTTCTT 58.294 40.000 0.00 0.00 36.75 2.52
2641 2691 5.337975 GCCTCTTCAATCCAGAGTAACTTCT 60.338 44.000 0.00 0.00 36.75 2.85
2642 2692 4.873259 GCCTCTTCAATCCAGAGTAACTTC 59.127 45.833 0.00 0.00 36.75 3.01
2643 2693 4.534103 AGCCTCTTCAATCCAGAGTAACTT 59.466 41.667 0.00 0.00 36.75 2.66
2644 2694 4.081198 CAGCCTCTTCAATCCAGAGTAACT 60.081 45.833 0.00 0.00 36.75 2.24
2645 2695 4.187694 CAGCCTCTTCAATCCAGAGTAAC 58.812 47.826 0.00 0.00 36.75 2.50
2646 2696 3.369892 GCAGCCTCTTCAATCCAGAGTAA 60.370 47.826 0.00 0.00 36.75 2.24
2647 2697 2.169352 GCAGCCTCTTCAATCCAGAGTA 59.831 50.000 0.00 0.00 36.75 2.59
2648 2698 1.065564 GCAGCCTCTTCAATCCAGAGT 60.066 52.381 0.00 0.00 36.75 3.24
2649 2699 1.065636 TGCAGCCTCTTCAATCCAGAG 60.066 52.381 0.00 0.00 38.03 3.35
2650 2700 0.986527 TGCAGCCTCTTCAATCCAGA 59.013 50.000 0.00 0.00 0.00 3.86
2651 2701 1.093159 GTGCAGCCTCTTCAATCCAG 58.907 55.000 0.00 0.00 0.00 3.86
2652 2702 0.674581 CGTGCAGCCTCTTCAATCCA 60.675 55.000 0.00 0.00 0.00 3.41
2653 2703 1.986575 GCGTGCAGCCTCTTCAATCC 61.987 60.000 0.00 0.00 40.81 3.01
2654 2704 1.427020 GCGTGCAGCCTCTTCAATC 59.573 57.895 0.00 0.00 40.81 2.67
2655 2705 3.583383 GCGTGCAGCCTCTTCAAT 58.417 55.556 0.00 0.00 40.81 2.57
2656 2706 3.650726 AGATGCGTGCAGCCTCTTCAA 62.651 52.381 6.46 0.00 46.44 2.69
2657 2707 2.176314 AGATGCGTGCAGCCTCTTCA 62.176 55.000 6.46 0.00 46.44 3.02
2658 2708 1.449246 AGATGCGTGCAGCCTCTTC 60.449 57.895 6.46 0.00 46.44 2.87
2659 2709 2.667418 AGATGCGTGCAGCCTCTT 59.333 55.556 6.46 0.00 46.44 2.85
2665 2715 2.713011 GCAATAAAGAGATGCGTGCAG 58.287 47.619 0.00 0.00 0.00 4.41
2666 2716 2.830772 GCAATAAAGAGATGCGTGCA 57.169 45.000 0.00 0.00 0.00 4.57
2671 2721 2.412065 GGCGATCGCAATAAAGAGATGC 60.412 50.000 38.00 14.69 44.11 3.91
2672 2722 2.802247 TGGCGATCGCAATAAAGAGATG 59.198 45.455 38.00 0.00 44.11 2.90
2673 2723 3.111853 TGGCGATCGCAATAAAGAGAT 57.888 42.857 38.00 0.00 44.11 2.75
2674 2724 2.595124 TGGCGATCGCAATAAAGAGA 57.405 45.000 38.00 9.71 44.11 3.10
2675 2725 2.802247 TCATGGCGATCGCAATAAAGAG 59.198 45.455 38.00 21.53 44.11 2.85
2676 2726 2.543848 GTCATGGCGATCGCAATAAAGA 59.456 45.455 38.00 24.04 44.11 2.52
2677 2727 2.545526 AGTCATGGCGATCGCAATAAAG 59.454 45.455 38.00 22.23 44.11 1.85
2678 2728 2.560504 AGTCATGGCGATCGCAATAAA 58.439 42.857 38.00 22.33 44.11 1.40
2679 2729 2.238942 AGTCATGGCGATCGCAATAA 57.761 45.000 38.00 20.00 44.11 1.40
2680 2730 2.135139 GAAGTCATGGCGATCGCAATA 58.865 47.619 38.00 24.77 44.11 1.90
2681 2731 0.940126 GAAGTCATGGCGATCGCAAT 59.060 50.000 38.00 31.63 44.11 3.56
2682 2732 0.108186 AGAAGTCATGGCGATCGCAA 60.108 50.000 38.00 30.81 44.11 4.85
2683 2733 0.744281 TAGAAGTCATGGCGATCGCA 59.256 50.000 38.00 25.19 44.11 5.10
2684 2734 1.132588 GTAGAAGTCATGGCGATCGC 58.867 55.000 31.52 31.52 41.06 4.58
2685 2735 2.783828 AGTAGAAGTCATGGCGATCG 57.216 50.000 11.69 11.69 0.00 3.69
2686 2736 5.773575 TCAATAGTAGAAGTCATGGCGATC 58.226 41.667 0.00 0.00 0.00 3.69
2687 2737 5.536538 TCTCAATAGTAGAAGTCATGGCGAT 59.463 40.000 0.00 0.00 0.00 4.58
2688 2738 4.887655 TCTCAATAGTAGAAGTCATGGCGA 59.112 41.667 0.00 0.00 0.00 5.54
2689 2739 5.188327 TCTCAATAGTAGAAGTCATGGCG 57.812 43.478 0.00 0.00 0.00 5.69
2690 2740 6.155475 ACTCTCAATAGTAGAAGTCATGGC 57.845 41.667 0.00 0.00 0.00 4.40
2691 2741 7.776107 TGAACTCTCAATAGTAGAAGTCATGG 58.224 38.462 0.00 0.00 0.00 3.66
2692 2742 8.681806 TCTGAACTCTCAATAGTAGAAGTCATG 58.318 37.037 0.00 0.00 0.00 3.07
2693 2743 8.815565 TCTGAACTCTCAATAGTAGAAGTCAT 57.184 34.615 0.00 0.00 0.00 3.06
2694 2744 8.637196 TTCTGAACTCTCAATAGTAGAAGTCA 57.363 34.615 0.00 0.00 0.00 3.41
2695 2745 9.515020 CATTCTGAACTCTCAATAGTAGAAGTC 57.485 37.037 0.00 0.00 31.12 3.01
2696 2746 8.474025 CCATTCTGAACTCTCAATAGTAGAAGT 58.526 37.037 0.00 0.00 31.12 3.01
2697 2747 7.925483 CCCATTCTGAACTCTCAATAGTAGAAG 59.075 40.741 0.00 0.00 31.12 2.85
2698 2748 7.633772 GCCCATTCTGAACTCTCAATAGTAGAA 60.634 40.741 0.00 0.00 31.78 2.10
2699 2749 6.183360 GCCCATTCTGAACTCTCAATAGTAGA 60.183 42.308 0.00 0.00 0.00 2.59
2700 2750 5.988561 GCCCATTCTGAACTCTCAATAGTAG 59.011 44.000 0.00 0.00 0.00 2.57
2701 2751 5.163301 GGCCCATTCTGAACTCTCAATAGTA 60.163 44.000 0.00 0.00 0.00 1.82
2702 2752 4.384647 GGCCCATTCTGAACTCTCAATAGT 60.385 45.833 0.00 0.00 0.00 2.12
2703 2753 4.133078 GGCCCATTCTGAACTCTCAATAG 58.867 47.826 0.00 0.00 0.00 1.73
2704 2754 3.523157 TGGCCCATTCTGAACTCTCAATA 59.477 43.478 0.00 0.00 0.00 1.90
2705 2755 2.309755 TGGCCCATTCTGAACTCTCAAT 59.690 45.455 0.00 0.00 0.00 2.57
2706 2756 1.704628 TGGCCCATTCTGAACTCTCAA 59.295 47.619 0.00 0.00 0.00 3.02
2707 2757 1.280133 CTGGCCCATTCTGAACTCTCA 59.720 52.381 0.00 0.00 0.00 3.27
2708 2758 2.016096 GCTGGCCCATTCTGAACTCTC 61.016 57.143 0.00 0.00 0.00 3.20
2709 2759 0.034670 GCTGGCCCATTCTGAACTCT 60.035 55.000 0.00 0.00 0.00 3.24
2710 2760 0.034670 AGCTGGCCCATTCTGAACTC 60.035 55.000 0.00 0.00 0.00 3.01
2711 2761 0.323178 CAGCTGGCCCATTCTGAACT 60.323 55.000 5.57 0.00 0.00 3.01
2712 2762 0.610232 ACAGCTGGCCCATTCTGAAC 60.610 55.000 19.93 0.00 0.00 3.18
2713 2763 0.112995 AACAGCTGGCCCATTCTGAA 59.887 50.000 19.93 0.00 0.00 3.02
2714 2764 0.609957 CAACAGCTGGCCCATTCTGA 60.610 55.000 19.93 0.00 0.00 3.27
2715 2765 1.601419 CCAACAGCTGGCCCATTCTG 61.601 60.000 19.93 10.53 38.76 3.02
2716 2766 1.304713 CCAACAGCTGGCCCATTCT 60.305 57.895 19.93 0.00 38.76 2.40
2717 2767 3.291611 CCAACAGCTGGCCCATTC 58.708 61.111 19.93 0.00 38.76 2.67
2725 2775 1.865865 ACTACGTTCACCAACAGCTG 58.134 50.000 13.48 13.48 32.14 4.24
2726 2776 3.738830 TTACTACGTTCACCAACAGCT 57.261 42.857 0.00 0.00 32.14 4.24
2727 2777 5.049954 TGAATTTACTACGTTCACCAACAGC 60.050 40.000 0.00 0.00 32.14 4.40
2728 2778 6.533819 TGAATTTACTACGTTCACCAACAG 57.466 37.500 0.00 0.00 32.14 3.16
2729 2779 6.922247 TTGAATTTACTACGTTCACCAACA 57.078 33.333 0.00 0.00 32.10 3.33
2730 2780 8.617761 TTTTTGAATTTACTACGTTCACCAAC 57.382 30.769 0.00 0.00 32.10 3.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.