Multiple sequence alignment - TraesCS2A01G221800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G221800 chr2A 100.000 6320 0 0 1 6320 211920508 211914189 0.000000e+00 11671.0
1 TraesCS2A01G221800 chr2A 91.255 263 21 1 369 631 712727039 712726779 2.170000e-94 357.0
2 TraesCS2A01G221800 chr2A 90.602 266 25 0 369 634 102328526 102328261 2.800000e-93 353.0
3 TraesCS2A01G221800 chr2D 96.684 4734 101 11 658 5366 196363180 196358478 0.000000e+00 7821.0
4 TraesCS2A01G221800 chr2D 87.070 611 32 18 5754 6320 196357607 196357000 0.000000e+00 647.0
5 TraesCS2A01G221800 chr2D 87.776 589 13 16 5409 5968 196357957 196357399 8.940000e-178 634.0
6 TraesCS2A01G221800 chr2B 94.748 5046 143 27 630 5626 253278118 253273146 0.000000e+00 7738.0
7 TraesCS2A01G221800 chr2B 90.000 240 16 7 6084 6320 253269905 253269671 2.860000e-78 303.0
8 TraesCS2A01G221800 chr2B 88.889 63 6 1 5918 5980 110366661 110366600 6.790000e-10 76.8
9 TraesCS2A01G221800 chr5B 80.772 1529 219 46 2246 3727 440261623 440260123 0.000000e+00 1125.0
10 TraesCS2A01G221800 chr5B 80.524 878 130 26 4469 5320 440249108 440248246 2.490000e-178 636.0
11 TraesCS2A01G221800 chr5B 87.446 462 52 5 1516 1971 440262393 440261932 1.560000e-145 527.0
12 TraesCS2A01G221800 chr5B 84.758 269 22 14 913 1174 440263336 440263080 1.050000e-62 252.0
13 TraesCS2A01G221800 chr5B 91.463 82 6 1 5965 6046 642723077 642722997 1.860000e-20 111.0
14 TraesCS2A01G221800 chr5B 91.463 82 6 1 5965 6046 642747373 642747293 1.860000e-20 111.0
15 TraesCS2A01G221800 chr5D 82.055 1304 180 25 2035 3316 370941102 370939831 0.000000e+00 1062.0
16 TraesCS2A01G221800 chr5D 89.506 324 29 4 1491 1809 370941687 370941364 7.630000e-109 405.0
17 TraesCS2A01G221800 chr5D 84.543 317 18 14 913 1222 370942828 370942536 1.040000e-72 285.0
18 TraesCS2A01G221800 chr7A 98.099 263 4 1 369 631 692618866 692618605 2.080000e-124 457.0
19 TraesCS2A01G221800 chr3A 96.212 264 10 0 369 632 492738419 492738682 3.500000e-117 433.0
20 TraesCS2A01G221800 chr3D 92.395 263 18 2 369 631 597648596 597648336 2.150000e-99 374.0
21 TraesCS2A01G221800 chr1D 91.288 264 21 2 369 631 178458767 178459029 6.020000e-95 359.0
22 TraesCS2A01G221800 chr5A 90.672 268 25 0 368 635 451458143 451457876 2.170000e-94 357.0
23 TraesCS2A01G221800 chr4B 89.744 273 27 1 367 639 398126204 398126475 1.300000e-91 348.0
24 TraesCS2A01G221800 chr4B 89.744 273 27 1 367 639 398161113 398161384 1.300000e-91 348.0
25 TraesCS2A01G221800 chr7B 82.500 160 22 5 5915 6070 695360913 695361070 1.110000e-27 135.0
26 TraesCS2A01G221800 chrUn 84.211 95 15 0 5976 6070 201361506 201361600 6.750000e-15 93.5
27 TraesCS2A01G221800 chrUn 84.211 95 15 0 5976 6070 329219010 329219104 6.750000e-15 93.5
28 TraesCS2A01G221800 chrUn 84.211 95 15 0 5976 6070 400258657 400258751 6.750000e-15 93.5
29 TraesCS2A01G221800 chrUn 83.158 95 16 0 5976 6070 154526969 154527063 3.140000e-13 87.9
30 TraesCS2A01G221800 chrUn 84.270 89 14 0 5982 6070 189571273 189571185 3.140000e-13 87.9
31 TraesCS2A01G221800 chrUn 83.158 95 16 0 5976 6070 357502098 357502192 3.140000e-13 87.9
32 TraesCS2A01G221800 chr6D 81.897 116 14 6 6124 6236 336989831 336989942 2.430000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G221800 chr2A 211914189 211920508 6319 True 11671.000000 11671 100.000000 1 6320 1 chr2A.!!$R2 6319
1 TraesCS2A01G221800 chr2D 196357000 196363180 6180 True 3034.000000 7821 90.510000 658 6320 3 chr2D.!!$R1 5662
2 TraesCS2A01G221800 chr2B 253269671 253278118 8447 True 4020.500000 7738 92.374000 630 6320 2 chr2B.!!$R2 5690
3 TraesCS2A01G221800 chr5B 440248246 440249108 862 True 636.000000 636 80.524000 4469 5320 1 chr5B.!!$R1 851
4 TraesCS2A01G221800 chr5B 440260123 440263336 3213 True 634.666667 1125 84.325333 913 3727 3 chr5B.!!$R4 2814
5 TraesCS2A01G221800 chr5D 370939831 370942828 2997 True 584.000000 1062 85.368000 913 3316 3 chr5D.!!$R1 2403

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
143 144 0.029035 ATTACGACGCCTACGAGCAG 59.971 55.000 0.00 0.00 43.93 4.24 F
621 622 0.099259 TGTACACCTATTCGCGGACG 59.901 55.000 6.13 0.00 42.01 4.79 F
622 623 0.593263 GTACACCTATTCGCGGACGG 60.593 60.000 6.13 4.34 40.63 4.79 F
623 624 0.747644 TACACCTATTCGCGGACGGA 60.748 55.000 6.13 0.00 40.63 4.69 F
2242 3596 0.182775 AAGTGGACCTTCTGCGGTTT 59.817 50.000 0.00 0.00 37.42 3.27 F
3586 5046 2.230508 ACAATTGGCTGACATCTGCTTG 59.769 45.455 10.83 9.29 40.16 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1205 1235 0.037590 GGTTACCATCCACACAGCCA 59.962 55.000 0.0 0.0 0.00 4.75 R
2045 3389 0.967380 AAGAGGAAATTGCAGGCCCG 60.967 55.000 0.0 0.0 0.00 6.13 R
2056 3400 3.072476 CACTAGGGTGGTCAAAGAGGAAA 59.928 47.826 0.0 0.0 39.59 3.13 R
2278 3697 3.340814 AGAAGGGGCGATATATGCTTG 57.659 47.619 0.0 0.0 0.00 4.01 R
3629 5089 1.099879 GTCCATCCATGCTGTCCTGC 61.100 60.000 0.0 0.0 0.00 4.85 R
5380 6885 0.037590 TCAACAATGTTCCTCGGGGG 59.962 55.000 0.0 0.0 0.00 5.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.591321 ACCCCTTATCAATCACACATGT 57.409 40.909 0.00 0.00 0.00 3.21
22 23 4.272489 ACCCCTTATCAATCACACATGTG 58.728 43.478 24.25 24.25 46.91 3.21
23 24 4.263905 ACCCCTTATCAATCACACATGTGT 60.264 41.667 25.76 25.76 45.76 3.72
24 25 4.706476 CCCCTTATCAATCACACATGTGTT 59.294 41.667 28.64 15.60 45.76 3.32
25 26 5.185635 CCCCTTATCAATCACACATGTGTTT 59.814 40.000 28.64 18.46 45.76 2.83
31 32 3.624326 ATCACACATGTGTTTGAACGG 57.376 42.857 28.64 15.44 45.76 4.44
32 33 2.633488 TCACACATGTGTTTGAACGGA 58.367 42.857 28.64 17.47 45.76 4.69
33 34 3.010420 TCACACATGTGTTTGAACGGAA 58.990 40.909 28.64 3.97 45.76 4.30
34 35 3.440522 TCACACATGTGTTTGAACGGAAA 59.559 39.130 28.64 0.00 45.76 3.13
35 36 4.082733 TCACACATGTGTTTGAACGGAAAA 60.083 37.500 28.64 0.00 45.76 2.29
36 37 4.803088 CACACATGTGTTTGAACGGAAAAT 59.197 37.500 28.64 0.00 42.83 1.82
37 38 5.974158 CACACATGTGTTTGAACGGAAAATA 59.026 36.000 28.64 0.00 42.83 1.40
38 39 5.974751 ACACATGTGTTTGAACGGAAAATAC 59.025 36.000 25.76 0.00 41.83 1.89
39 40 6.183360 ACACATGTGTTTGAACGGAAAATACT 60.183 34.615 25.76 0.00 41.83 2.12
40 41 6.359617 CACATGTGTTTGAACGGAAAATACTC 59.640 38.462 18.03 0.00 31.94 2.59
41 42 6.262273 ACATGTGTTTGAACGGAAAATACTCT 59.738 34.615 0.00 0.00 31.94 3.24
42 43 6.055231 TGTGTTTGAACGGAAAATACTCTG 57.945 37.500 7.66 0.00 31.94 3.35
43 44 5.008217 TGTGTTTGAACGGAAAATACTCTGG 59.992 40.000 7.66 0.00 31.94 3.86
44 45 5.237779 GTGTTTGAACGGAAAATACTCTGGA 59.762 40.000 0.00 0.00 0.00 3.86
45 46 5.823570 TGTTTGAACGGAAAATACTCTGGAA 59.176 36.000 0.00 0.00 0.00 3.53
46 47 6.017440 TGTTTGAACGGAAAATACTCTGGAAG 60.017 38.462 0.00 0.00 0.00 3.46
47 48 5.223449 TGAACGGAAAATACTCTGGAAGT 57.777 39.130 0.00 0.00 42.33 3.01
48 49 6.349243 TGAACGGAAAATACTCTGGAAGTA 57.651 37.500 0.00 0.00 44.49 2.24
49 50 6.761312 TGAACGGAAAATACTCTGGAAGTAA 58.239 36.000 0.00 0.00 43.61 2.24
50 51 7.391620 TGAACGGAAAATACTCTGGAAGTAAT 58.608 34.615 0.00 0.00 43.61 1.89
51 52 8.533657 TGAACGGAAAATACTCTGGAAGTAATA 58.466 33.333 0.00 0.00 43.61 0.98
52 53 9.374838 GAACGGAAAATACTCTGGAAGTAATAA 57.625 33.333 0.00 0.00 43.61 1.40
53 54 9.729281 AACGGAAAATACTCTGGAAGTAATAAA 57.271 29.630 0.00 0.00 43.61 1.40
54 55 9.729281 ACGGAAAATACTCTGGAAGTAATAAAA 57.271 29.630 0.00 0.00 43.61 1.52
78 79 8.655935 AAAAATGAGGAGTTTGAGGTTATCAT 57.344 30.769 0.00 0.00 37.89 2.45
79 80 8.655935 AAAATGAGGAGTTTGAGGTTATCATT 57.344 30.769 0.00 0.00 37.89 2.57
80 81 9.753674 AAAATGAGGAGTTTGAGGTTATCATTA 57.246 29.630 0.00 0.00 37.89 1.90
81 82 8.738645 AATGAGGAGTTTGAGGTTATCATTAC 57.261 34.615 0.00 0.00 37.89 1.89
82 83 6.650120 TGAGGAGTTTGAGGTTATCATTACC 58.350 40.000 0.00 0.00 37.89 2.85
83 84 6.002653 AGGAGTTTGAGGTTATCATTACCC 57.997 41.667 0.00 0.00 37.89 3.69
84 85 5.731678 AGGAGTTTGAGGTTATCATTACCCT 59.268 40.000 0.00 0.00 37.89 4.34
85 86 6.056236 GGAGTTTGAGGTTATCATTACCCTC 58.944 44.000 0.00 0.00 43.13 4.30
91 92 6.187727 GAGGTTATCATTACCCTCAATCCA 57.812 41.667 0.00 0.00 42.51 3.41
92 93 6.590656 AGGTTATCATTACCCTCAATCCAA 57.409 37.500 0.00 0.00 36.27 3.53
93 94 7.166758 AGGTTATCATTACCCTCAATCCAAT 57.833 36.000 0.00 0.00 36.27 3.16
94 95 7.595488 AGGTTATCATTACCCTCAATCCAATT 58.405 34.615 0.00 0.00 36.27 2.32
95 96 7.506938 AGGTTATCATTACCCTCAATCCAATTG 59.493 37.037 0.00 0.00 37.72 2.32
96 97 7.287696 GGTTATCATTACCCTCAATCCAATTGT 59.712 37.037 4.43 0.00 41.02 2.71
97 98 8.695456 GTTATCATTACCCTCAATCCAATTGTT 58.305 33.333 4.43 0.00 41.02 2.83
98 99 9.928618 TTATCATTACCCTCAATCCAATTGTTA 57.071 29.630 4.43 0.00 41.02 2.41
133 134 9.910511 TTCAGATTCTTTATTAAATTACGACGC 57.089 29.630 0.00 0.00 0.00 5.19
134 135 8.545420 TCAGATTCTTTATTAAATTACGACGCC 58.455 33.333 0.00 0.00 0.00 5.68
135 136 8.548721 CAGATTCTTTATTAAATTACGACGCCT 58.451 33.333 0.00 0.00 0.00 5.52
136 137 9.754382 AGATTCTTTATTAAATTACGACGCCTA 57.246 29.630 0.00 0.00 0.00 3.93
137 138 9.789029 GATTCTTTATTAAATTACGACGCCTAC 57.211 33.333 0.00 0.00 0.00 3.18
139 140 7.192913 TCTTTATTAAATTACGACGCCTACGA 58.807 34.615 0.00 0.00 43.93 3.43
140 141 6.974677 TTATTAAATTACGACGCCTACGAG 57.025 37.500 0.00 0.00 43.93 4.18
141 142 1.553308 AAATTACGACGCCTACGAGC 58.447 50.000 0.00 0.00 43.93 5.03
142 143 0.452987 AATTACGACGCCTACGAGCA 59.547 50.000 0.00 0.00 43.93 4.26
143 144 0.029035 ATTACGACGCCTACGAGCAG 59.971 55.000 0.00 0.00 43.93 4.24
144 145 1.020861 TTACGACGCCTACGAGCAGA 61.021 55.000 0.00 0.00 43.93 4.26
145 146 1.020861 TACGACGCCTACGAGCAGAA 61.021 55.000 0.00 0.00 43.93 3.02
146 147 1.583967 CGACGCCTACGAGCAGAAG 60.584 63.158 0.00 0.00 43.93 2.85
147 148 1.874466 GACGCCTACGAGCAGAAGC 60.874 63.158 0.00 0.00 43.93 3.86
148 149 2.181777 CGCCTACGAGCAGAAGCA 59.818 61.111 0.00 0.00 45.49 3.91
149 150 1.446099 CGCCTACGAGCAGAAGCAA 60.446 57.895 0.00 0.00 45.49 3.91
150 151 1.416813 CGCCTACGAGCAGAAGCAAG 61.417 60.000 0.00 0.00 45.49 4.01
151 152 1.700600 GCCTACGAGCAGAAGCAAGC 61.701 60.000 0.00 0.00 45.49 4.01
152 153 0.108424 CCTACGAGCAGAAGCAAGCT 60.108 55.000 0.00 0.00 45.49 3.74
153 154 0.997932 CTACGAGCAGAAGCAAGCTG 59.002 55.000 0.00 0.00 45.49 4.24
168 169 5.147767 GCAAGCTGCTTAAAATATTTGGC 57.852 39.130 15.51 6.43 40.96 4.52
169 170 4.259930 GCAAGCTGCTTAAAATATTTGGCG 60.260 41.667 15.51 0.00 40.96 5.69
170 171 4.718940 AGCTGCTTAAAATATTTGGCGT 57.281 36.364 0.39 0.00 0.00 5.68
171 172 5.072040 AGCTGCTTAAAATATTTGGCGTT 57.928 34.783 0.39 0.70 0.00 4.84
172 173 5.102313 AGCTGCTTAAAATATTTGGCGTTC 58.898 37.500 0.39 1.67 0.00 3.95
173 174 4.267690 GCTGCTTAAAATATTTGGCGTTCC 59.732 41.667 0.39 0.00 0.00 3.62
174 175 4.416620 TGCTTAAAATATTTGGCGTTCCG 58.583 39.130 0.39 0.00 34.14 4.30
175 176 4.156190 TGCTTAAAATATTTGGCGTTCCGA 59.844 37.500 0.39 0.00 34.14 4.55
176 177 5.163602 TGCTTAAAATATTTGGCGTTCCGAT 60.164 36.000 0.39 0.00 34.14 4.18
177 178 5.398416 GCTTAAAATATTTGGCGTTCCGATC 59.602 40.000 0.39 0.00 34.14 3.69
178 179 6.687081 TTAAAATATTTGGCGTTCCGATCT 57.313 33.333 0.39 0.00 34.14 2.75
179 180 4.813296 AAATATTTGGCGTTCCGATCTC 57.187 40.909 0.00 0.00 34.14 2.75
180 181 2.234300 TATTTGGCGTTCCGATCTCC 57.766 50.000 0.00 0.00 34.14 3.71
181 182 0.463833 ATTTGGCGTTCCGATCTCCC 60.464 55.000 0.00 0.00 34.14 4.30
182 183 2.530958 TTTGGCGTTCCGATCTCCCC 62.531 60.000 0.00 0.00 34.14 4.81
183 184 3.155167 GGCGTTCCGATCTCCCCT 61.155 66.667 0.00 0.00 0.00 4.79
184 185 2.417936 GCGTTCCGATCTCCCCTC 59.582 66.667 0.00 0.00 0.00 4.30
185 186 3.130227 CGTTCCGATCTCCCCTCC 58.870 66.667 0.00 0.00 0.00 4.30
186 187 1.455959 CGTTCCGATCTCCCCTCCT 60.456 63.158 0.00 0.00 0.00 3.69
187 188 1.457009 CGTTCCGATCTCCCCTCCTC 61.457 65.000 0.00 0.00 0.00 3.71
188 189 0.397254 GTTCCGATCTCCCCTCCTCA 60.397 60.000 0.00 0.00 0.00 3.86
189 190 0.105964 TTCCGATCTCCCCTCCTCAG 60.106 60.000 0.00 0.00 0.00 3.35
190 191 2.206536 CCGATCTCCCCTCCTCAGC 61.207 68.421 0.00 0.00 0.00 4.26
191 192 2.206536 CGATCTCCCCTCCTCAGCC 61.207 68.421 0.00 0.00 0.00 4.85
192 193 1.074926 GATCTCCCCTCCTCAGCCA 60.075 63.158 0.00 0.00 0.00 4.75
193 194 1.074623 ATCTCCCCTCCTCAGCCAG 60.075 63.158 0.00 0.00 0.00 4.85
194 195 1.895886 ATCTCCCCTCCTCAGCCAGT 61.896 60.000 0.00 0.00 0.00 4.00
195 196 1.614824 CTCCCCTCCTCAGCCAGTT 60.615 63.158 0.00 0.00 0.00 3.16
196 197 1.613630 TCCCCTCCTCAGCCAGTTC 60.614 63.158 0.00 0.00 0.00 3.01
197 198 1.920325 CCCCTCCTCAGCCAGTTCA 60.920 63.158 0.00 0.00 0.00 3.18
198 199 1.298014 CCCTCCTCAGCCAGTTCAC 59.702 63.158 0.00 0.00 0.00 3.18
199 200 1.298014 CCTCCTCAGCCAGTTCACC 59.702 63.158 0.00 0.00 0.00 4.02
200 201 1.298014 CTCCTCAGCCAGTTCACCC 59.702 63.158 0.00 0.00 0.00 4.61
201 202 2.046892 CCTCAGCCAGTTCACCCG 60.047 66.667 0.00 0.00 0.00 5.28
202 203 2.743718 CTCAGCCAGTTCACCCGT 59.256 61.111 0.00 0.00 0.00 5.28
203 204 1.374758 CTCAGCCAGTTCACCCGTC 60.375 63.158 0.00 0.00 0.00 4.79
204 205 2.358737 CAGCCAGTTCACCCGTCC 60.359 66.667 0.00 0.00 0.00 4.79
205 206 4.003788 AGCCAGTTCACCCGTCCG 62.004 66.667 0.00 0.00 0.00 4.79
222 223 3.508840 GCGCTGCGGCCAGTAAAT 61.509 61.111 24.61 0.00 41.26 1.40
223 224 3.051392 GCGCTGCGGCCAGTAAATT 62.051 57.895 24.61 0.00 41.26 1.82
224 225 1.506262 CGCTGCGGCCAGTAAATTT 59.494 52.632 15.40 0.00 41.26 1.82
225 226 0.523335 CGCTGCGGCCAGTAAATTTC 60.523 55.000 15.40 0.00 41.26 2.17
226 227 0.179137 GCTGCGGCCAGTAAATTTCC 60.179 55.000 6.12 0.00 41.26 3.13
227 228 1.463674 CTGCGGCCAGTAAATTTCCT 58.536 50.000 2.24 0.00 34.31 3.36
228 229 1.401905 CTGCGGCCAGTAAATTTCCTC 59.598 52.381 2.24 0.00 34.31 3.71
229 230 0.738975 GCGGCCAGTAAATTTCCTCC 59.261 55.000 2.24 0.00 0.00 4.30
230 231 1.953311 GCGGCCAGTAAATTTCCTCCA 60.953 52.381 2.24 0.00 0.00 3.86
231 232 2.017049 CGGCCAGTAAATTTCCTCCAG 58.983 52.381 2.24 0.00 0.00 3.86
232 233 2.618045 CGGCCAGTAAATTTCCTCCAGT 60.618 50.000 2.24 0.00 0.00 4.00
233 234 3.431415 GGCCAGTAAATTTCCTCCAGTT 58.569 45.455 0.00 0.00 0.00 3.16
234 235 3.832490 GGCCAGTAAATTTCCTCCAGTTT 59.168 43.478 0.00 0.00 0.00 2.66
235 236 5.014202 GGCCAGTAAATTTCCTCCAGTTTA 58.986 41.667 0.00 0.00 0.00 2.01
236 237 5.479027 GGCCAGTAAATTTCCTCCAGTTTAA 59.521 40.000 0.00 0.00 0.00 1.52
237 238 6.350194 GGCCAGTAAATTTCCTCCAGTTTAAG 60.350 42.308 0.00 0.00 0.00 1.85
238 239 6.433093 GCCAGTAAATTTCCTCCAGTTTAAGA 59.567 38.462 0.00 0.00 0.00 2.10
239 240 7.039993 GCCAGTAAATTTCCTCCAGTTTAAGAA 60.040 37.037 0.00 0.00 0.00 2.52
240 241 8.515414 CCAGTAAATTTCCTCCAGTTTAAGAAG 58.485 37.037 0.00 0.00 0.00 2.85
241 242 8.515414 CAGTAAATTTCCTCCAGTTTAAGAAGG 58.485 37.037 0.00 0.00 0.00 3.46
242 243 8.225416 AGTAAATTTCCTCCAGTTTAAGAAGGT 58.775 33.333 0.00 0.00 0.00 3.50
243 244 7.914427 AAATTTCCTCCAGTTTAAGAAGGTT 57.086 32.000 0.00 0.00 0.00 3.50
244 245 7.914427 AATTTCCTCCAGTTTAAGAAGGTTT 57.086 32.000 0.00 0.00 0.00 3.27
245 246 7.914427 ATTTCCTCCAGTTTAAGAAGGTTTT 57.086 32.000 0.00 0.00 0.00 2.43
246 247 6.954487 TTCCTCCAGTTTAAGAAGGTTTTC 57.046 37.500 0.00 0.00 0.00 2.29
247 248 6.008696 TCCTCCAGTTTAAGAAGGTTTTCA 57.991 37.500 0.00 0.00 35.70 2.69
248 249 6.428295 TCCTCCAGTTTAAGAAGGTTTTCAA 58.572 36.000 0.00 0.00 35.70 2.69
249 250 7.066781 TCCTCCAGTTTAAGAAGGTTTTCAAT 58.933 34.615 0.00 0.00 35.70 2.57
250 251 7.230712 TCCTCCAGTTTAAGAAGGTTTTCAATC 59.769 37.037 0.00 0.00 35.70 2.67
251 252 7.014230 CCTCCAGTTTAAGAAGGTTTTCAATCA 59.986 37.037 0.00 0.00 35.70 2.57
252 253 8.299990 TCCAGTTTAAGAAGGTTTTCAATCAA 57.700 30.769 0.00 0.00 35.70 2.57
253 254 8.754080 TCCAGTTTAAGAAGGTTTTCAATCAAA 58.246 29.630 0.00 0.00 35.70 2.69
254 255 9.377312 CCAGTTTAAGAAGGTTTTCAATCAAAA 57.623 29.630 0.00 0.00 35.70 2.44
258 259 9.936759 TTTAAGAAGGTTTTCAATCAAAAGTGT 57.063 25.926 0.00 0.00 34.49 3.55
259 260 7.832503 AAGAAGGTTTTCAATCAAAAGTGTG 57.167 32.000 0.00 0.00 34.49 3.82
260 261 7.169158 AGAAGGTTTTCAATCAAAAGTGTGA 57.831 32.000 0.00 0.00 34.49 3.58
261 262 7.260603 AGAAGGTTTTCAATCAAAAGTGTGAG 58.739 34.615 0.00 0.00 34.49 3.51
262 263 6.773976 AGGTTTTCAATCAAAAGTGTGAGA 57.226 33.333 0.00 0.00 34.49 3.27
263 264 7.352079 AGGTTTTCAATCAAAAGTGTGAGAT 57.648 32.000 0.00 0.00 34.49 2.75
264 265 8.463930 AGGTTTTCAATCAAAAGTGTGAGATA 57.536 30.769 0.00 0.00 34.49 1.98
265 266 8.912988 AGGTTTTCAATCAAAAGTGTGAGATAA 58.087 29.630 0.00 0.00 34.49 1.75
266 267 9.696917 GGTTTTCAATCAAAAGTGTGAGATAAT 57.303 29.630 0.00 0.00 34.49 1.28
270 271 9.695526 TTCAATCAAAAGTGTGAGATAATTTGG 57.304 29.630 0.00 0.00 0.00 3.28
271 272 7.814107 TCAATCAAAAGTGTGAGATAATTTGGC 59.186 33.333 0.00 0.00 0.00 4.52
272 273 6.899393 TCAAAAGTGTGAGATAATTTGGCT 57.101 33.333 0.00 0.00 0.00 4.75
273 274 7.288810 TCAAAAGTGTGAGATAATTTGGCTT 57.711 32.000 0.00 0.00 0.00 4.35
274 275 7.370383 TCAAAAGTGTGAGATAATTTGGCTTC 58.630 34.615 0.00 0.00 0.00 3.86
275 276 6.899393 AAAGTGTGAGATAATTTGGCTTCA 57.101 33.333 0.00 0.00 0.00 3.02
276 277 5.886960 AGTGTGAGATAATTTGGCTTCAC 57.113 39.130 0.00 0.00 0.00 3.18
277 278 4.702131 AGTGTGAGATAATTTGGCTTCACC 59.298 41.667 0.00 0.00 39.84 4.02
278 279 4.702131 GTGTGAGATAATTTGGCTTCACCT 59.298 41.667 0.00 0.00 40.22 4.00
279 280 5.183904 GTGTGAGATAATTTGGCTTCACCTT 59.816 40.000 0.00 0.00 40.22 3.50
280 281 5.774690 TGTGAGATAATTTGGCTTCACCTTT 59.225 36.000 0.00 0.00 40.22 3.11
281 282 6.095377 GTGAGATAATTTGGCTTCACCTTTG 58.905 40.000 0.00 0.00 40.22 2.77
282 283 6.009589 TGAGATAATTTGGCTTCACCTTTGA 58.990 36.000 0.00 0.00 40.22 2.69
283 284 6.664816 TGAGATAATTTGGCTTCACCTTTGAT 59.335 34.615 0.00 0.00 40.22 2.57
284 285 7.178983 TGAGATAATTTGGCTTCACCTTTGATT 59.821 33.333 0.00 0.00 40.22 2.57
285 286 7.550712 AGATAATTTGGCTTCACCTTTGATTC 58.449 34.615 0.00 0.00 40.22 2.52
286 287 5.549742 AATTTGGCTTCACCTTTGATTCA 57.450 34.783 0.00 0.00 40.22 2.57
287 288 5.549742 ATTTGGCTTCACCTTTGATTCAA 57.450 34.783 0.00 0.00 40.22 2.69
288 289 4.320608 TTGGCTTCACCTTTGATTCAAC 57.679 40.909 0.00 0.00 40.22 3.18
289 290 2.627699 TGGCTTCACCTTTGATTCAACC 59.372 45.455 0.00 0.00 40.22 3.77
290 291 2.351738 GGCTTCACCTTTGATTCAACCG 60.352 50.000 0.00 0.00 34.51 4.44
291 292 2.293399 GCTTCACCTTTGATTCAACCGT 59.707 45.455 0.00 0.00 0.00 4.83
292 293 3.853307 GCTTCACCTTTGATTCAACCGTG 60.853 47.826 14.64 14.64 0.00 4.94
293 294 2.925724 TCACCTTTGATTCAACCGTGT 58.074 42.857 17.95 4.91 29.88 4.49
294 295 4.074627 TCACCTTTGATTCAACCGTGTA 57.925 40.909 17.95 8.07 29.88 2.90
295 296 4.647611 TCACCTTTGATTCAACCGTGTAT 58.352 39.130 17.95 0.00 29.88 2.29
296 297 5.067273 TCACCTTTGATTCAACCGTGTATT 58.933 37.500 17.95 0.00 29.88 1.89
297 298 5.180492 TCACCTTTGATTCAACCGTGTATTC 59.820 40.000 17.95 0.00 29.88 1.75
298 299 5.181245 CACCTTTGATTCAACCGTGTATTCT 59.819 40.000 13.35 0.00 0.00 2.40
299 300 5.411669 ACCTTTGATTCAACCGTGTATTCTC 59.588 40.000 0.00 0.00 0.00 2.87
300 301 5.163754 CCTTTGATTCAACCGTGTATTCTCC 60.164 44.000 0.00 0.00 0.00 3.71
301 302 4.819105 TGATTCAACCGTGTATTCTCCT 57.181 40.909 0.00 0.00 0.00 3.69
302 303 5.160607 TGATTCAACCGTGTATTCTCCTT 57.839 39.130 0.00 0.00 0.00 3.36
303 304 4.935205 TGATTCAACCGTGTATTCTCCTTG 59.065 41.667 0.00 0.00 0.00 3.61
304 305 2.695359 TCAACCGTGTATTCTCCTTGC 58.305 47.619 0.00 0.00 0.00 4.01
305 306 1.393539 CAACCGTGTATTCTCCTTGCG 59.606 52.381 0.00 0.00 0.00 4.85
306 307 0.606604 ACCGTGTATTCTCCTTGCGT 59.393 50.000 0.00 0.00 0.00 5.24
307 308 1.278238 CCGTGTATTCTCCTTGCGTC 58.722 55.000 0.00 0.00 0.00 5.19
308 309 1.403647 CCGTGTATTCTCCTTGCGTCA 60.404 52.381 0.00 0.00 0.00 4.35
309 310 2.333926 CGTGTATTCTCCTTGCGTCAA 58.666 47.619 0.00 0.00 0.00 3.18
310 311 2.092211 CGTGTATTCTCCTTGCGTCAAC 59.908 50.000 0.00 0.00 0.00 3.18
311 312 3.326747 GTGTATTCTCCTTGCGTCAACT 58.673 45.455 0.00 0.00 0.00 3.16
312 313 3.746492 GTGTATTCTCCTTGCGTCAACTT 59.254 43.478 0.00 0.00 0.00 2.66
313 314 3.994392 TGTATTCTCCTTGCGTCAACTTC 59.006 43.478 0.00 0.00 0.00 3.01
314 315 2.910688 TTCTCCTTGCGTCAACTTCT 57.089 45.000 0.00 0.00 0.00 2.85
315 316 2.440539 TCTCCTTGCGTCAACTTCTC 57.559 50.000 0.00 0.00 0.00 2.87
316 317 1.000955 TCTCCTTGCGTCAACTTCTCC 59.999 52.381 0.00 0.00 0.00 3.71
317 318 0.756294 TCCTTGCGTCAACTTCTCCA 59.244 50.000 0.00 0.00 0.00 3.86
318 319 1.151668 CCTTGCGTCAACTTCTCCAG 58.848 55.000 0.00 0.00 0.00 3.86
319 320 1.541233 CCTTGCGTCAACTTCTCCAGT 60.541 52.381 0.00 0.00 37.30 4.00
321 322 1.865865 TGCGTCAACTTCTCCAGTTC 58.134 50.000 0.00 0.00 44.60 3.01
322 323 1.412710 TGCGTCAACTTCTCCAGTTCT 59.587 47.619 0.00 0.00 44.60 3.01
323 324 2.158957 TGCGTCAACTTCTCCAGTTCTT 60.159 45.455 0.00 0.00 44.60 2.52
324 325 2.872858 GCGTCAACTTCTCCAGTTCTTT 59.127 45.455 0.00 0.00 44.60 2.52
325 326 3.312697 GCGTCAACTTCTCCAGTTCTTTT 59.687 43.478 0.00 0.00 44.60 2.27
326 327 4.201920 GCGTCAACTTCTCCAGTTCTTTTT 60.202 41.667 0.00 0.00 44.60 1.94
327 328 5.266242 CGTCAACTTCTCCAGTTCTTTTTG 58.734 41.667 0.00 0.00 44.60 2.44
328 329 5.064707 CGTCAACTTCTCCAGTTCTTTTTGA 59.935 40.000 0.00 0.00 44.60 2.69
329 330 6.490534 GTCAACTTCTCCAGTTCTTTTTGAG 58.509 40.000 0.00 0.00 44.60 3.02
330 331 5.066505 TCAACTTCTCCAGTTCTTTTTGAGC 59.933 40.000 0.00 0.00 44.60 4.26
331 332 3.885901 ACTTCTCCAGTTCTTTTTGAGCC 59.114 43.478 0.00 0.00 27.32 4.70
332 333 2.494059 TCTCCAGTTCTTTTTGAGCCG 58.506 47.619 0.00 0.00 0.00 5.52
333 334 0.951558 TCCAGTTCTTTTTGAGCCGC 59.048 50.000 0.00 0.00 0.00 6.53
334 335 0.954452 CCAGTTCTTTTTGAGCCGCT 59.046 50.000 0.00 0.00 0.00 5.52
335 336 1.068954 CCAGTTCTTTTTGAGCCGCTC 60.069 52.381 13.81 13.81 0.00 5.03
336 337 1.876156 CAGTTCTTTTTGAGCCGCTCT 59.124 47.619 20.87 0.00 0.00 4.09
337 338 2.291741 CAGTTCTTTTTGAGCCGCTCTT 59.708 45.455 20.87 0.00 0.00 2.85
338 339 3.498397 CAGTTCTTTTTGAGCCGCTCTTA 59.502 43.478 20.87 6.79 0.00 2.10
339 340 3.748568 AGTTCTTTTTGAGCCGCTCTTAG 59.251 43.478 20.87 12.12 0.00 2.18
340 341 2.699954 TCTTTTTGAGCCGCTCTTAGG 58.300 47.619 20.87 7.22 0.00 2.69
349 350 2.355244 GCTCTTAGGCGCTAGCGG 60.355 66.667 35.86 20.21 46.35 5.52
350 351 2.336809 CTCTTAGGCGCTAGCGGG 59.663 66.667 35.86 12.29 46.35 6.13
351 352 2.124024 TCTTAGGCGCTAGCGGGA 60.124 61.111 35.86 8.48 46.35 5.14
352 353 2.136196 CTCTTAGGCGCTAGCGGGAG 62.136 65.000 35.86 11.13 46.35 4.30
364 365 4.414732 CGGGAGCCTTTAGTACGC 57.585 61.111 0.00 0.00 0.00 4.42
365 366 1.814527 CGGGAGCCTTTAGTACGCT 59.185 57.895 0.00 0.00 34.97 5.07
366 367 0.248949 CGGGAGCCTTTAGTACGCTC 60.249 60.000 10.26 10.26 46.67 5.03
367 368 1.112950 GGGAGCCTTTAGTACGCTCT 58.887 55.000 16.13 0.00 46.60 4.09
368 369 1.481363 GGGAGCCTTTAGTACGCTCTT 59.519 52.381 16.13 0.00 46.60 2.85
369 370 2.692041 GGGAGCCTTTAGTACGCTCTTA 59.308 50.000 16.13 0.00 46.60 2.10
370 371 3.490590 GGGAGCCTTTAGTACGCTCTTAC 60.491 52.174 16.13 6.70 46.60 2.34
371 372 3.380954 GGAGCCTTTAGTACGCTCTTACT 59.619 47.826 16.13 0.00 46.60 2.24
372 373 4.497842 GGAGCCTTTAGTACGCTCTTACTC 60.498 50.000 16.13 6.85 46.60 2.59
373 374 3.380954 AGCCTTTAGTACGCTCTTACTCC 59.619 47.826 0.00 0.00 34.10 3.85
374 375 3.490590 GCCTTTAGTACGCTCTTACTCCC 60.491 52.174 0.00 0.00 34.10 4.30
375 376 3.952967 CCTTTAGTACGCTCTTACTCCCT 59.047 47.826 0.00 0.00 34.10 4.20
376 377 4.036616 CCTTTAGTACGCTCTTACTCCCTC 59.963 50.000 0.00 0.00 34.10 4.30
377 378 2.055684 AGTACGCTCTTACTCCCTCC 57.944 55.000 0.00 0.00 0.00 4.30
378 379 0.662085 GTACGCTCTTACTCCCTCCG 59.338 60.000 0.00 0.00 0.00 4.63
379 380 0.254178 TACGCTCTTACTCCCTCCGT 59.746 55.000 0.00 0.00 0.00 4.69
380 381 1.031029 ACGCTCTTACTCCCTCCGTC 61.031 60.000 0.00 0.00 0.00 4.79
381 382 1.726533 CGCTCTTACTCCCTCCGTCC 61.727 65.000 0.00 0.00 0.00 4.79
382 383 1.726533 GCTCTTACTCCCTCCGTCCG 61.727 65.000 0.00 0.00 0.00 4.79
383 384 1.726533 CTCTTACTCCCTCCGTCCGC 61.727 65.000 0.00 0.00 0.00 5.54
384 385 3.122250 CTTACTCCCTCCGTCCGCG 62.122 68.421 0.00 0.00 37.95 6.46
385 386 3.626996 TTACTCCCTCCGTCCGCGA 62.627 63.158 8.23 0.00 41.33 5.87
386 387 3.626996 TACTCCCTCCGTCCGCGAA 62.627 63.158 8.23 0.00 41.33 4.70
387 388 2.898920 TACTCCCTCCGTCCGCGAAT 62.899 60.000 8.23 0.00 41.33 3.34
388 389 2.124193 TCCCTCCGTCCGCGAATA 60.124 61.111 8.23 0.00 41.33 1.75
389 390 1.731433 CTCCCTCCGTCCGCGAATAA 61.731 60.000 8.23 0.00 41.33 1.40
390 391 1.299926 CCCTCCGTCCGCGAATAAG 60.300 63.158 8.23 0.00 41.33 1.73
391 392 1.436336 CCTCCGTCCGCGAATAAGT 59.564 57.895 8.23 0.00 41.33 2.24
392 393 0.870307 CCTCCGTCCGCGAATAAGTG 60.870 60.000 8.23 0.00 41.33 3.16
393 394 0.179145 CTCCGTCCGCGAATAAGTGT 60.179 55.000 8.23 0.00 41.33 3.55
394 395 1.064505 CTCCGTCCGCGAATAAGTGTA 59.935 52.381 8.23 0.00 41.33 2.90
395 396 1.194495 CCGTCCGCGAATAAGTGTAC 58.806 55.000 8.23 0.00 41.33 2.90
396 397 1.467883 CCGTCCGCGAATAAGTGTACA 60.468 52.381 8.23 0.00 41.33 2.90
397 398 2.456989 CGTCCGCGAATAAGTGTACAT 58.543 47.619 8.23 0.00 41.33 2.29
398 399 2.466571 CGTCCGCGAATAAGTGTACATC 59.533 50.000 8.23 0.00 41.33 3.06
399 400 3.703420 GTCCGCGAATAAGTGTACATCT 58.297 45.455 8.23 0.00 0.00 2.90
400 401 4.553351 CGTCCGCGAATAAGTGTACATCTA 60.553 45.833 8.23 0.00 41.33 1.98
401 402 4.910456 GTCCGCGAATAAGTGTACATCTAG 59.090 45.833 8.23 0.00 0.00 2.43
402 403 3.669122 CCGCGAATAAGTGTACATCTAGC 59.331 47.826 8.23 0.00 0.00 3.42
403 404 4.537965 CGCGAATAAGTGTACATCTAGCT 58.462 43.478 0.00 0.00 0.00 3.32
404 405 4.976731 CGCGAATAAGTGTACATCTAGCTT 59.023 41.667 0.00 0.00 0.00 3.74
405 406 5.459107 CGCGAATAAGTGTACATCTAGCTTT 59.541 40.000 0.00 0.00 0.00 3.51
406 407 6.019801 CGCGAATAAGTGTACATCTAGCTTTT 60.020 38.462 0.00 0.00 0.00 2.27
407 408 7.119997 GCGAATAAGTGTACATCTAGCTTTTG 58.880 38.462 0.00 0.00 0.00 2.44
408 409 7.201530 GCGAATAAGTGTACATCTAGCTTTTGT 60.202 37.037 0.00 0.00 0.00 2.83
409 410 8.321716 CGAATAAGTGTACATCTAGCTTTTGTC 58.678 37.037 0.00 0.00 0.00 3.18
410 411 9.372369 GAATAAGTGTACATCTAGCTTTTGTCT 57.628 33.333 0.00 0.00 0.00 3.41
411 412 9.726438 AATAAGTGTACATCTAGCTTTTGTCTT 57.274 29.630 0.00 0.00 0.00 3.01
414 415 8.764524 AGTGTACATCTAGCTTTTGTCTTAAG 57.235 34.615 0.00 0.00 0.00 1.85
415 416 8.368668 AGTGTACATCTAGCTTTTGTCTTAAGT 58.631 33.333 0.00 0.00 0.00 2.24
416 417 8.989980 GTGTACATCTAGCTTTTGTCTTAAGTT 58.010 33.333 0.00 0.00 0.00 2.66
420 421 8.709646 ACATCTAGCTTTTGTCTTAAGTTAACG 58.290 33.333 1.63 0.00 0.00 3.18
421 422 8.709646 CATCTAGCTTTTGTCTTAAGTTAACGT 58.290 33.333 1.63 0.00 0.00 3.99
422 423 8.068893 TCTAGCTTTTGTCTTAAGTTAACGTG 57.931 34.615 4.15 0.00 0.00 4.49
423 424 6.673154 AGCTTTTGTCTTAAGTTAACGTGT 57.327 33.333 4.15 0.00 0.00 4.49
424 425 7.080353 AGCTTTTGTCTTAAGTTAACGTGTT 57.920 32.000 4.15 0.00 0.00 3.32
425 426 8.200364 AGCTTTTGTCTTAAGTTAACGTGTTA 57.800 30.769 4.15 0.00 0.00 2.41
426 427 8.667463 AGCTTTTGTCTTAAGTTAACGTGTTAA 58.333 29.630 4.15 1.18 33.10 2.01
427 428 9.276397 GCTTTTGTCTTAAGTTAACGTGTTAAA 57.724 29.630 6.76 0.00 36.86 1.52
436 437 7.897153 AAGTTAACGTGTTAAAATTTCGACC 57.103 32.000 6.76 0.00 36.86 4.79
437 438 7.014092 AGTTAACGTGTTAAAATTTCGACCA 57.986 32.000 6.76 0.00 36.86 4.02
438 439 7.470900 AGTTAACGTGTTAAAATTTCGACCAA 58.529 30.769 6.76 0.00 36.86 3.67
439 440 7.429051 AGTTAACGTGTTAAAATTTCGACCAAC 59.571 33.333 6.76 4.61 36.86 3.77
440 441 5.488645 ACGTGTTAAAATTTCGACCAACT 57.511 34.783 3.55 0.00 0.00 3.16
441 442 5.882553 ACGTGTTAAAATTTCGACCAACTT 58.117 33.333 3.55 0.00 0.00 2.66
442 443 6.324042 ACGTGTTAAAATTTCGACCAACTTT 58.676 32.000 3.55 0.00 0.00 2.66
443 444 6.469915 ACGTGTTAAAATTTCGACCAACTTTC 59.530 34.615 3.55 0.00 0.00 2.62
444 445 6.689669 CGTGTTAAAATTTCGACCAACTTTCT 59.310 34.615 0.00 0.00 0.00 2.52
445 446 7.851963 CGTGTTAAAATTTCGACCAACTTTCTA 59.148 33.333 0.00 0.00 0.00 2.10
446 447 9.505995 GTGTTAAAATTTCGACCAACTTTCTAA 57.494 29.630 0.00 0.00 0.00 2.10
447 448 9.724839 TGTTAAAATTTCGACCAACTTTCTAAG 57.275 29.630 0.00 0.00 0.00 2.18
448 449 9.940166 GTTAAAATTTCGACCAACTTTCTAAGA 57.060 29.630 0.00 0.00 0.00 2.10
451 452 9.863845 AAAATTTCGACCAACTTTCTAAGAAAA 57.136 25.926 0.00 0.00 31.47 2.29
452 453 9.863845 AAATTTCGACCAACTTTCTAAGAAAAA 57.136 25.926 0.00 0.00 31.47 1.94
453 454 9.516314 AATTTCGACCAACTTTCTAAGAAAAAG 57.484 29.630 0.00 0.00 39.20 2.27
454 455 7.619964 TTCGACCAACTTTCTAAGAAAAAGT 57.380 32.000 0.00 0.00 46.22 2.66
455 456 8.721019 TTCGACCAACTTTCTAAGAAAAAGTA 57.279 30.769 2.02 0.00 44.13 2.24
456 457 8.721019 TCGACCAACTTTCTAAGAAAAAGTAA 57.279 30.769 2.02 0.00 44.13 2.24
457 458 9.165035 TCGACCAACTTTCTAAGAAAAAGTAAA 57.835 29.630 2.02 0.00 44.13 2.01
458 459 9.777575 CGACCAACTTTCTAAGAAAAAGTAAAA 57.222 29.630 2.02 0.00 44.13 1.52
460 461 9.582431 ACCAACTTTCTAAGAAAAAGTAAAAGC 57.418 29.630 2.02 0.00 44.13 3.51
461 462 9.581099 CCAACTTTCTAAGAAAAAGTAAAAGCA 57.419 29.630 2.02 0.00 44.13 3.91
493 494 9.862371 AGCACTAAATTAATATCACTAGATCCG 57.138 33.333 0.00 0.00 35.67 4.18
494 495 9.640963 GCACTAAATTAATATCACTAGATCCGT 57.359 33.333 0.00 0.00 35.67 4.69
504 505 8.964476 ATATCACTAGATCCGTTTTGAAATGT 57.036 30.769 0.00 0.00 35.67 2.71
506 507 7.591006 TCACTAGATCCGTTTTGAAATGTAC 57.409 36.000 0.00 0.00 0.00 2.90
507 508 7.383687 TCACTAGATCCGTTTTGAAATGTACT 58.616 34.615 0.00 0.00 0.00 2.73
508 509 7.876068 TCACTAGATCCGTTTTGAAATGTACTT 59.124 33.333 0.00 0.00 0.00 2.24
509 510 8.504005 CACTAGATCCGTTTTGAAATGTACTTT 58.496 33.333 0.00 0.00 0.00 2.66
510 511 8.718734 ACTAGATCCGTTTTGAAATGTACTTTC 58.281 33.333 0.00 9.52 43.05 2.62
615 616 9.321562 ACCAAAAACTATATGTACACCTATTCG 57.678 33.333 0.00 0.00 0.00 3.34
616 617 8.280497 CCAAAAACTATATGTACACCTATTCGC 58.720 37.037 0.00 0.00 0.00 4.70
617 618 7.633361 AAAACTATATGTACACCTATTCGCG 57.367 36.000 0.00 0.00 0.00 5.87
618 619 5.306532 ACTATATGTACACCTATTCGCGG 57.693 43.478 6.13 0.00 0.00 6.46
619 620 5.005740 ACTATATGTACACCTATTCGCGGA 58.994 41.667 6.13 0.00 0.00 5.54
620 621 2.503920 ATGTACACCTATTCGCGGAC 57.496 50.000 6.13 0.00 0.00 4.79
621 622 0.099259 TGTACACCTATTCGCGGACG 59.901 55.000 6.13 0.00 42.01 4.79
622 623 0.593263 GTACACCTATTCGCGGACGG 60.593 60.000 6.13 4.34 40.63 4.79
623 624 0.747644 TACACCTATTCGCGGACGGA 60.748 55.000 6.13 0.00 40.63 4.69
624 625 1.299165 CACCTATTCGCGGACGGAG 60.299 63.158 6.13 0.00 40.63 4.63
625 626 2.335369 CCTATTCGCGGACGGAGG 59.665 66.667 6.13 1.14 40.63 4.30
626 627 2.335369 CTATTCGCGGACGGAGGG 59.665 66.667 6.13 0.00 40.63 4.30
627 628 2.124193 TATTCGCGGACGGAGGGA 60.124 61.111 6.13 0.00 40.63 4.20
628 629 2.131294 CTATTCGCGGACGGAGGGAG 62.131 65.000 6.13 0.00 40.63 4.30
643 644 6.379579 ACGGAGGGAGTATATTTCTTTAGGA 58.620 40.000 0.00 0.00 0.00 2.94
647 648 9.106977 GGAGGGAGTATATTTCTTTAGGAAGAT 57.893 37.037 0.00 0.00 41.35 2.40
667 668 6.141560 AGATACTACTAGTTAAACCACGGC 57.858 41.667 0.00 0.00 0.00 5.68
679 680 1.078708 CCACGGCGAATAGGGTTGT 60.079 57.895 16.62 0.00 0.00 3.32
743 745 3.056107 TCGGTTGTTCACTTCATCCCTAG 60.056 47.826 0.00 0.00 0.00 3.02
977 1000 0.966875 TACCTCTTCGCGCCCAGTAA 60.967 55.000 0.00 0.00 0.00 2.24
986 1009 1.495951 CGCCCAGTAACTTCGTTGC 59.504 57.895 0.00 0.00 0.00 4.17
988 1011 0.887387 GCCCAGTAACTTCGTTGCCA 60.887 55.000 0.00 0.00 0.00 4.92
1274 1319 2.944409 TTTTACGGGTGGCGCAGTGT 62.944 55.000 10.83 2.19 0.00 3.55
1275 1320 4.673298 TACGGGTGGCGCAGTGTG 62.673 66.667 10.83 0.00 0.00 3.82
1283 1328 3.058160 GCGCAGTGTGCCAGGATT 61.058 61.111 18.06 0.00 41.12 3.01
1284 1329 2.629656 GCGCAGTGTGCCAGGATTT 61.630 57.895 18.06 0.00 41.12 2.17
1285 1330 1.210931 CGCAGTGTGCCAGGATTTG 59.789 57.895 0.00 0.00 41.12 2.32
1300 1345 5.702209 CCAGGATTTGTTTGAAAATTGGGAG 59.298 40.000 0.00 0.00 29.41 4.30
1364 1409 7.010091 GGGTGGTTTTATTATTTTGCTCGAATG 59.990 37.037 0.00 0.00 0.00 2.67
1457 1819 8.445275 AACTCCTTTTCTTCTTCTTCTTCTTC 57.555 34.615 0.00 0.00 0.00 2.87
1459 1821 8.271458 ACTCCTTTTCTTCTTCTTCTTCTTCTT 58.729 33.333 0.00 0.00 0.00 2.52
1460 1822 8.669946 TCCTTTTCTTCTTCTTCTTCTTCTTC 57.330 34.615 0.00 0.00 0.00 2.87
1462 1824 9.119418 CCTTTTCTTCTTCTTCTTCTTCTTCTT 57.881 33.333 0.00 0.00 0.00 2.52
1722 2972 8.144478 CAGCTTTGTCTTAGCCTTATCTGTATA 58.856 37.037 0.00 0.00 39.47 1.47
1723 2973 8.875168 AGCTTTGTCTTAGCCTTATCTGTATAT 58.125 33.333 0.00 0.00 39.47 0.86
1833 3163 6.579666 AGCTTTCTTGCACATCTTATTTCA 57.420 33.333 0.00 0.00 34.99 2.69
1932 3276 6.364976 GTTAAAATTAACGGTGCAGAAGCAAT 59.635 34.615 0.00 0.00 41.88 3.56
2056 3400 0.823460 CCAAATTACGGGCCTGCAAT 59.177 50.000 12.89 8.07 0.00 3.56
2242 3596 0.182775 AAGTGGACCTTCTGCGGTTT 59.817 50.000 0.00 0.00 37.42 3.27
2263 3682 8.173130 CGGTTTTACCAGTCATATGTTTACTTC 58.827 37.037 1.90 0.00 38.47 3.01
2278 3697 8.816640 ATGTTTACTTCAAATGACATGAAACC 57.183 30.769 0.00 0.00 36.43 3.27
2283 3702 4.933505 TCAAATGACATGAAACCAAGCA 57.066 36.364 0.00 0.00 0.00 3.91
2284 3703 5.471556 TCAAATGACATGAAACCAAGCAT 57.528 34.783 0.00 0.00 0.00 3.79
2549 3977 4.499696 GCAGTTAGCAACATGTGGTTTCTT 60.500 41.667 0.00 0.00 44.79 2.52
2916 4350 5.133153 TCTTGGGGATGATTCTGATGATGAA 59.867 40.000 0.00 0.00 0.00 2.57
3262 4696 6.486993 GTCAGTTCCTCTTTATGAAAAGGTGT 59.513 38.462 0.00 0.00 42.09 4.16
3316 4751 7.423199 TGATTAGGTACGTCAGATATGTTCAC 58.577 38.462 0.00 0.00 0.00 3.18
3390 4826 7.178274 TGAAACTGGTGAAGTAAATTGCCATAT 59.822 33.333 0.00 0.00 38.56 1.78
3508 4956 4.284829 TGATGACATGCCAAGTTACTCA 57.715 40.909 0.00 0.00 0.00 3.41
3586 5046 2.230508 ACAATTGGCTGACATCTGCTTG 59.769 45.455 10.83 9.29 40.16 4.01
3629 5089 1.909532 GATGACGTGGTTCGAGTTACG 59.090 52.381 13.45 13.45 42.86 3.18
3830 5290 2.700897 AGGTTCACTAGTGTCAAGCTGT 59.299 45.455 21.58 5.66 0.00 4.40
3831 5291 3.134804 AGGTTCACTAGTGTCAAGCTGTT 59.865 43.478 21.58 5.10 0.00 3.16
3832 5292 3.877508 GGTTCACTAGTGTCAAGCTGTTT 59.122 43.478 21.99 0.00 0.00 2.83
3833 5293 4.260784 GGTTCACTAGTGTCAAGCTGTTTG 60.261 45.833 21.99 0.00 38.17 2.93
3834 5294 3.466836 TCACTAGTGTCAAGCTGTTTGG 58.533 45.455 21.99 0.00 37.39 3.28
3835 5295 3.133901 TCACTAGTGTCAAGCTGTTTGGA 59.866 43.478 21.99 0.00 37.39 3.53
3836 5296 3.876914 CACTAGTGTCAAGCTGTTTGGAA 59.123 43.478 15.06 0.00 37.39 3.53
3837 5297 4.516698 CACTAGTGTCAAGCTGTTTGGAAT 59.483 41.667 15.06 0.00 37.39 3.01
3838 5298 5.700832 CACTAGTGTCAAGCTGTTTGGAATA 59.299 40.000 15.06 0.00 37.39 1.75
3839 5299 5.934625 ACTAGTGTCAAGCTGTTTGGAATAG 59.065 40.000 4.39 7.10 37.39 1.73
3840 5300 3.503748 AGTGTCAAGCTGTTTGGAATAGC 59.496 43.478 4.39 1.74 44.88 2.97
3939 5399 8.272545 TCTTGTCTGATGATAATTGGAGTTTG 57.727 34.615 0.00 0.00 0.00 2.93
3944 5404 6.767902 TCTGATGATAATTGGAGTTTGTAGCC 59.232 38.462 0.00 0.00 0.00 3.93
4081 5541 6.486320 TCTTGCAATTACTTCATGTGTCTTCA 59.514 34.615 0.00 0.00 0.00 3.02
4167 5627 1.577736 AGCCAGCTACAGGTTGATCT 58.422 50.000 0.00 0.00 0.00 2.75
4438 5912 5.324409 TCCATACTTTTCTTGGCAGATGTT 58.676 37.500 0.00 0.00 0.00 2.71
4493 5967 4.685169 TGAGAAACAGAATTCCGATTGC 57.315 40.909 0.65 0.00 0.00 3.56
4770 6253 6.515272 TTCATGCCTTTTCAGGATAGAAAC 57.485 37.500 0.00 0.00 44.19 2.78
4785 6268 6.162241 AGGATAGAAACCCACCCTTTGATATT 59.838 38.462 0.00 0.00 0.00 1.28
4937 6425 4.813133 GCTGGTAACCCCCTTTATCTTTGT 60.813 45.833 0.00 0.00 0.00 2.83
4943 6431 3.116900 ACCCCCTTTATCTTTGTGGTTGT 60.117 43.478 0.00 0.00 0.00 3.32
4944 6432 3.258123 CCCCCTTTATCTTTGTGGTTGTG 59.742 47.826 0.00 0.00 0.00 3.33
5372 6877 9.607988 TTTTTCTCTTGTATTGTTGAGTGTCTA 57.392 29.630 0.00 0.00 0.00 2.59
5374 6879 8.818141 TTCTCTTGTATTGTTGAGTGTCTAAG 57.182 34.615 0.00 0.00 0.00 2.18
5377 6882 5.483685 TGTATTGTTGAGTGTCTAAGCCT 57.516 39.130 0.00 0.00 0.00 4.58
5378 6883 5.479306 TGTATTGTTGAGTGTCTAAGCCTC 58.521 41.667 0.00 0.00 0.00 4.70
5379 6884 3.402628 TTGTTGAGTGTCTAAGCCTCC 57.597 47.619 0.00 0.00 0.00 4.30
5380 6885 1.623811 TGTTGAGTGTCTAAGCCTCCC 59.376 52.381 0.00 0.00 0.00 4.30
5381 6886 1.066071 GTTGAGTGTCTAAGCCTCCCC 60.066 57.143 0.00 0.00 0.00 4.81
5382 6887 0.617820 TGAGTGTCTAAGCCTCCCCC 60.618 60.000 0.00 0.00 0.00 5.40
5640 7624 4.012374 AGTAGTTGGCATTTGATGACTGG 58.988 43.478 0.00 0.00 39.69 4.00
5683 7667 9.912634 CTTATTTGTTAATGGAATGACACAAGT 57.087 29.630 0.00 0.00 0.00 3.16
5685 7669 5.119931 TGTTAATGGAATGACACAAGTGC 57.880 39.130 0.00 0.00 0.00 4.40
5686 7670 4.826733 TGTTAATGGAATGACACAAGTGCT 59.173 37.500 0.00 0.00 0.00 4.40
5687 7671 6.000840 TGTTAATGGAATGACACAAGTGCTA 58.999 36.000 0.00 0.00 0.00 3.49
5688 7672 6.072728 TGTTAATGGAATGACACAAGTGCTAC 60.073 38.462 0.00 0.00 0.00 3.58
5689 7673 3.769739 TGGAATGACACAAGTGCTACT 57.230 42.857 0.00 0.00 0.00 2.57
5690 7674 4.085357 TGGAATGACACAAGTGCTACTT 57.915 40.909 0.00 0.00 39.39 2.24
5692 7676 5.616270 TGGAATGACACAAGTGCTACTTTA 58.384 37.500 0.00 0.00 36.03 1.85
5696 7680 7.308589 GGAATGACACAAGTGCTACTTTACATT 60.309 37.037 0.00 0.00 36.03 2.71
5697 7681 8.615878 AATGACACAAGTGCTACTTTACATTA 57.384 30.769 0.00 0.00 36.03 1.90
5698 7682 8.792830 ATGACACAAGTGCTACTTTACATTAT 57.207 30.769 0.00 0.00 36.03 1.28
5699 7683 8.028540 TGACACAAGTGCTACTTTACATTATG 57.971 34.615 0.00 0.00 36.03 1.90
5700 7684 7.875554 TGACACAAGTGCTACTTTACATTATGA 59.124 33.333 0.00 0.00 36.03 2.15
5765 7777 1.203038 TGATCAAACATGGGTGCCAGT 60.203 47.619 0.00 0.00 36.75 4.00
5766 7778 1.203052 GATCAAACATGGGTGCCAGTG 59.797 52.381 0.00 0.00 36.75 3.66
5773 7785 0.033796 ATGGGTGCCAGTGAATCCTG 60.034 55.000 0.00 0.00 36.75 3.86
5899 8885 6.783708 TGGTATTCCAGGCGAAAATAAATT 57.216 33.333 0.00 0.00 39.03 1.82
5931 8917 8.964533 AACACTATATACTCTCTCCATTCCAT 57.035 34.615 0.00 0.00 0.00 3.41
5952 8969 6.097981 TCCATTGAATAAGGCATGCATGTTTA 59.902 34.615 26.79 23.10 0.00 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.591321 ACATGTGTGATTGATAAGGGGT 57.409 40.909 0.00 0.00 0.00 4.95
15 16 6.205784 AGTATTTTCCGTTCAAACACATGTG 58.794 36.000 24.25 24.25 0.00 3.21
16 17 6.262273 AGAGTATTTTCCGTTCAAACACATGT 59.738 34.615 0.00 0.00 0.00 3.21
17 18 6.578545 CAGAGTATTTTCCGTTCAAACACATG 59.421 38.462 0.00 0.00 0.00 3.21
18 19 6.293955 CCAGAGTATTTTCCGTTCAAACACAT 60.294 38.462 0.00 0.00 0.00 3.21
19 20 5.008217 CCAGAGTATTTTCCGTTCAAACACA 59.992 40.000 0.00 0.00 0.00 3.72
20 21 5.237779 TCCAGAGTATTTTCCGTTCAAACAC 59.762 40.000 0.00 0.00 0.00 3.32
21 22 5.369833 TCCAGAGTATTTTCCGTTCAAACA 58.630 37.500 0.00 0.00 0.00 2.83
22 23 5.934935 TCCAGAGTATTTTCCGTTCAAAC 57.065 39.130 0.00 0.00 0.00 2.93
23 24 6.059484 ACTTCCAGAGTATTTTCCGTTCAAA 58.941 36.000 0.00 0.00 36.65 2.69
24 25 5.617252 ACTTCCAGAGTATTTTCCGTTCAA 58.383 37.500 0.00 0.00 36.65 2.69
25 26 5.223449 ACTTCCAGAGTATTTTCCGTTCA 57.777 39.130 0.00 0.00 36.65 3.18
26 27 7.845066 ATTACTTCCAGAGTATTTTCCGTTC 57.155 36.000 0.00 0.00 40.44 3.95
27 28 9.729281 TTTATTACTTCCAGAGTATTTTCCGTT 57.271 29.630 0.00 0.00 40.44 4.44
28 29 9.729281 TTTTATTACTTCCAGAGTATTTTCCGT 57.271 29.630 0.00 0.00 40.44 4.69
53 54 8.655935 ATGATAACCTCAAACTCCTCATTTTT 57.344 30.769 0.00 0.00 37.44 1.94
54 55 8.655935 AATGATAACCTCAAACTCCTCATTTT 57.344 30.769 0.00 0.00 37.44 1.82
55 56 9.178758 GTAATGATAACCTCAAACTCCTCATTT 57.821 33.333 0.00 0.00 37.44 2.32
56 57 7.775561 GGTAATGATAACCTCAAACTCCTCATT 59.224 37.037 0.00 0.00 37.44 2.57
57 58 7.283329 GGTAATGATAACCTCAAACTCCTCAT 58.717 38.462 0.00 0.00 37.44 2.90
58 59 6.352737 GGGTAATGATAACCTCAAACTCCTCA 60.353 42.308 0.00 0.00 35.84 3.86
59 60 6.056236 GGGTAATGATAACCTCAAACTCCTC 58.944 44.000 0.00 0.00 35.84 3.71
60 61 5.731678 AGGGTAATGATAACCTCAAACTCCT 59.268 40.000 0.00 0.00 46.89 3.69
61 62 6.002653 AGGGTAATGATAACCTCAAACTCC 57.997 41.667 0.00 0.00 46.89 3.85
70 71 7.287696 ACAATTGGATTGAGGGTAATGATAACC 59.712 37.037 10.83 0.00 42.83 2.85
71 72 8.237811 ACAATTGGATTGAGGGTAATGATAAC 57.762 34.615 10.83 0.00 42.83 1.89
72 73 8.837099 AACAATTGGATTGAGGGTAATGATAA 57.163 30.769 10.83 0.00 42.83 1.75
107 108 9.910511 GCGTCGTAATTTAATAAAGAATCTGAA 57.089 29.630 0.00 0.00 0.00 3.02
108 109 8.545420 GGCGTCGTAATTTAATAAAGAATCTGA 58.455 33.333 0.00 0.00 0.00 3.27
109 110 8.548721 AGGCGTCGTAATTTAATAAAGAATCTG 58.451 33.333 0.00 0.00 0.00 2.90
110 111 8.658499 AGGCGTCGTAATTTAATAAAGAATCT 57.342 30.769 0.00 0.00 0.00 2.40
111 112 9.789029 GTAGGCGTCGTAATTTAATAAAGAATC 57.211 33.333 0.00 0.00 0.00 2.52
112 113 8.482429 CGTAGGCGTCGTAATTTAATAAAGAAT 58.518 33.333 0.00 0.00 0.00 2.40
113 114 7.700234 TCGTAGGCGTCGTAATTTAATAAAGAA 59.300 33.333 0.00 0.00 39.49 2.52
114 115 7.192913 TCGTAGGCGTCGTAATTTAATAAAGA 58.807 34.615 0.00 0.00 39.49 2.52
115 116 7.380438 TCGTAGGCGTCGTAATTTAATAAAG 57.620 36.000 0.00 0.00 39.49 1.85
116 117 6.074888 GCTCGTAGGCGTCGTAATTTAATAAA 60.075 38.462 0.00 0.00 39.49 1.40
117 118 5.399301 GCTCGTAGGCGTCGTAATTTAATAA 59.601 40.000 0.00 0.00 39.49 1.40
118 119 4.911610 GCTCGTAGGCGTCGTAATTTAATA 59.088 41.667 0.00 0.00 39.49 0.98
119 120 3.732721 GCTCGTAGGCGTCGTAATTTAAT 59.267 43.478 0.00 0.00 39.49 1.40
120 121 3.108144 GCTCGTAGGCGTCGTAATTTAA 58.892 45.455 0.00 0.00 39.49 1.52
121 122 2.097304 TGCTCGTAGGCGTCGTAATTTA 59.903 45.455 0.00 0.00 39.49 1.40
122 123 1.135315 TGCTCGTAGGCGTCGTAATTT 60.135 47.619 0.00 0.00 39.49 1.82
123 124 0.452987 TGCTCGTAGGCGTCGTAATT 59.547 50.000 0.00 0.00 39.49 1.40
124 125 0.029035 CTGCTCGTAGGCGTCGTAAT 59.971 55.000 0.00 0.00 39.49 1.89
125 126 1.020861 TCTGCTCGTAGGCGTCGTAA 61.021 55.000 0.00 0.00 39.49 3.18
126 127 1.020861 TTCTGCTCGTAGGCGTCGTA 61.021 55.000 0.00 0.00 39.49 3.43
127 128 2.254703 CTTCTGCTCGTAGGCGTCGT 62.255 60.000 0.00 0.00 39.49 4.34
128 129 1.583967 CTTCTGCTCGTAGGCGTCG 60.584 63.158 0.00 0.00 39.49 5.12
129 130 1.874466 GCTTCTGCTCGTAGGCGTC 60.874 63.158 0.00 0.00 39.49 5.19
130 131 2.154798 TTGCTTCTGCTCGTAGGCGT 62.155 55.000 0.00 0.00 40.48 5.68
131 132 1.416813 CTTGCTTCTGCTCGTAGGCG 61.417 60.000 0.00 0.00 40.48 5.52
132 133 1.700600 GCTTGCTTCTGCTCGTAGGC 61.701 60.000 0.00 0.00 40.48 3.93
133 134 0.108424 AGCTTGCTTCTGCTCGTAGG 60.108 55.000 0.00 0.00 40.48 3.18
134 135 0.997932 CAGCTTGCTTCTGCTCGTAG 59.002 55.000 0.00 0.00 37.44 3.51
135 136 3.128259 CAGCTTGCTTCTGCTCGTA 57.872 52.632 0.00 0.00 37.44 3.43
136 137 3.963222 CAGCTTGCTTCTGCTCGT 58.037 55.556 0.00 0.00 37.44 4.18
146 147 4.259930 CGCCAAATATTTTAAGCAGCTTGC 60.260 41.667 18.54 7.27 45.46 4.01
147 148 4.864247 ACGCCAAATATTTTAAGCAGCTTG 59.136 37.500 18.54 0.00 0.00 4.01
148 149 5.072040 ACGCCAAATATTTTAAGCAGCTT 57.928 34.783 13.46 13.46 0.00 3.74
149 150 4.718940 ACGCCAAATATTTTAAGCAGCT 57.281 36.364 12.60 0.00 0.00 4.24
150 151 4.267690 GGAACGCCAAATATTTTAAGCAGC 59.732 41.667 12.60 0.00 0.00 5.25
151 152 5.949233 GGAACGCCAAATATTTTAAGCAG 57.051 39.130 12.60 8.84 0.00 4.24
169 170 0.397254 TGAGGAGGGGAGATCGGAAC 60.397 60.000 0.00 0.00 0.00 3.62
170 171 0.105964 CTGAGGAGGGGAGATCGGAA 60.106 60.000 0.00 0.00 0.00 4.30
171 172 1.539165 CTGAGGAGGGGAGATCGGA 59.461 63.158 0.00 0.00 0.00 4.55
172 173 2.206536 GCTGAGGAGGGGAGATCGG 61.207 68.421 0.00 0.00 0.00 4.18
173 174 2.206536 GGCTGAGGAGGGGAGATCG 61.207 68.421 0.00 0.00 0.00 3.69
174 175 1.074926 TGGCTGAGGAGGGGAGATC 60.075 63.158 0.00 0.00 0.00 2.75
175 176 1.074623 CTGGCTGAGGAGGGGAGAT 60.075 63.158 0.00 0.00 0.00 2.75
176 177 2.112072 AACTGGCTGAGGAGGGGAGA 62.112 60.000 0.00 0.00 0.00 3.71
177 178 1.614824 AACTGGCTGAGGAGGGGAG 60.615 63.158 0.00 0.00 0.00 4.30
178 179 1.613630 GAACTGGCTGAGGAGGGGA 60.614 63.158 0.00 0.00 0.00 4.81
179 180 1.920325 TGAACTGGCTGAGGAGGGG 60.920 63.158 0.00 0.00 0.00 4.79
180 181 1.298014 GTGAACTGGCTGAGGAGGG 59.702 63.158 0.00 0.00 0.00 4.30
181 182 1.298014 GGTGAACTGGCTGAGGAGG 59.702 63.158 0.00 0.00 0.00 4.30
182 183 1.298014 GGGTGAACTGGCTGAGGAG 59.702 63.158 0.00 0.00 0.00 3.69
183 184 2.583441 CGGGTGAACTGGCTGAGGA 61.583 63.158 0.00 0.00 0.00 3.71
184 185 2.046892 CGGGTGAACTGGCTGAGG 60.047 66.667 0.00 0.00 0.00 3.86
185 186 1.374758 GACGGGTGAACTGGCTGAG 60.375 63.158 0.00 0.00 0.00 3.35
186 187 2.741092 GACGGGTGAACTGGCTGA 59.259 61.111 0.00 0.00 0.00 4.26
187 188 2.358737 GGACGGGTGAACTGGCTG 60.359 66.667 0.00 0.00 32.37 4.85
188 189 4.003788 CGGACGGGTGAACTGGCT 62.004 66.667 0.00 0.00 32.37 4.75
205 206 2.542211 AAATTTACTGGCCGCAGCGC 62.542 55.000 10.07 0.00 41.24 5.92
206 207 0.523335 GAAATTTACTGGCCGCAGCG 60.523 55.000 8.18 8.18 41.24 5.18
207 208 0.179137 GGAAATTTACTGGCCGCAGC 60.179 55.000 0.00 0.00 38.76 5.25
208 209 1.401905 GAGGAAATTTACTGGCCGCAG 59.598 52.381 7.92 0.00 0.00 5.18
209 210 1.459450 GAGGAAATTTACTGGCCGCA 58.541 50.000 7.92 0.00 0.00 5.69
210 211 0.738975 GGAGGAAATTTACTGGCCGC 59.261 55.000 7.92 0.00 0.00 6.53
211 212 2.017049 CTGGAGGAAATTTACTGGCCG 58.983 52.381 7.92 0.00 0.00 6.13
212 213 3.087370 ACTGGAGGAAATTTACTGGCC 57.913 47.619 7.92 4.34 0.00 5.36
213 214 6.433093 TCTTAAACTGGAGGAAATTTACTGGC 59.567 38.462 7.92 0.00 0.00 4.85
214 215 7.996098 TCTTAAACTGGAGGAAATTTACTGG 57.004 36.000 7.92 0.53 0.00 4.00
215 216 8.515414 CCTTCTTAAACTGGAGGAAATTTACTG 58.485 37.037 7.92 0.00 0.00 2.74
216 217 8.225416 ACCTTCTTAAACTGGAGGAAATTTACT 58.775 33.333 1.41 1.41 0.00 2.24
217 218 8.405418 ACCTTCTTAAACTGGAGGAAATTTAC 57.595 34.615 0.00 0.00 0.00 2.01
218 219 9.429109 AAACCTTCTTAAACTGGAGGAAATTTA 57.571 29.630 0.00 0.00 0.00 1.40
219 220 7.914427 AACCTTCTTAAACTGGAGGAAATTT 57.086 32.000 0.00 0.00 0.00 1.82
220 221 7.914427 AAACCTTCTTAAACTGGAGGAAATT 57.086 32.000 0.00 0.00 0.00 1.82
221 222 7.563556 TGAAAACCTTCTTAAACTGGAGGAAAT 59.436 33.333 0.00 0.00 32.33 2.17
222 223 6.893005 TGAAAACCTTCTTAAACTGGAGGAAA 59.107 34.615 0.00 0.00 32.33 3.13
223 224 6.428295 TGAAAACCTTCTTAAACTGGAGGAA 58.572 36.000 0.00 0.00 32.33 3.36
224 225 6.008696 TGAAAACCTTCTTAAACTGGAGGA 57.991 37.500 0.00 0.00 32.33 3.71
225 226 6.709018 TTGAAAACCTTCTTAAACTGGAGG 57.291 37.500 0.00 0.00 32.33 4.30
226 227 7.940850 TGATTGAAAACCTTCTTAAACTGGAG 58.059 34.615 0.00 0.00 32.33 3.86
227 228 7.889873 TGATTGAAAACCTTCTTAAACTGGA 57.110 32.000 0.00 0.00 32.33 3.86
228 229 8.940768 TTTGATTGAAAACCTTCTTAAACTGG 57.059 30.769 0.00 0.00 32.33 4.00
232 233 9.936759 ACACTTTTGATTGAAAACCTTCTTAAA 57.063 25.926 0.00 0.00 32.33 1.52
233 234 9.364989 CACACTTTTGATTGAAAACCTTCTTAA 57.635 29.630 0.00 0.00 32.33 1.85
234 235 8.744652 TCACACTTTTGATTGAAAACCTTCTTA 58.255 29.630 0.00 0.00 32.33 2.10
235 236 7.610865 TCACACTTTTGATTGAAAACCTTCTT 58.389 30.769 0.00 0.00 32.33 2.52
236 237 7.122650 TCTCACACTTTTGATTGAAAACCTTCT 59.877 33.333 0.00 0.00 32.33 2.85
237 238 7.257722 TCTCACACTTTTGATTGAAAACCTTC 58.742 34.615 0.00 0.00 30.13 3.46
238 239 7.169158 TCTCACACTTTTGATTGAAAACCTT 57.831 32.000 0.00 0.00 30.13 3.50
239 240 6.773976 TCTCACACTTTTGATTGAAAACCT 57.226 33.333 0.00 0.00 30.13 3.50
240 241 9.696917 ATTATCTCACACTTTTGATTGAAAACC 57.303 29.630 0.00 0.00 30.13 3.27
244 245 9.695526 CCAAATTATCTCACACTTTTGATTGAA 57.304 29.630 0.00 0.00 0.00 2.69
245 246 7.814107 GCCAAATTATCTCACACTTTTGATTGA 59.186 33.333 0.00 0.00 0.00 2.57
246 247 7.816031 AGCCAAATTATCTCACACTTTTGATTG 59.184 33.333 0.00 0.00 0.00 2.67
247 248 7.899973 AGCCAAATTATCTCACACTTTTGATT 58.100 30.769 0.00 0.00 0.00 2.57
248 249 7.472334 AGCCAAATTATCTCACACTTTTGAT 57.528 32.000 0.00 0.00 0.00 2.57
249 250 6.899393 AGCCAAATTATCTCACACTTTTGA 57.101 33.333 0.00 0.00 0.00 2.69
250 251 7.115378 GTGAAGCCAAATTATCTCACACTTTTG 59.885 37.037 0.00 0.00 0.00 2.44
251 252 7.147976 GTGAAGCCAAATTATCTCACACTTTT 58.852 34.615 0.00 0.00 0.00 2.27
252 253 6.294731 GGTGAAGCCAAATTATCTCACACTTT 60.295 38.462 0.00 0.00 37.17 2.66
253 254 5.183904 GGTGAAGCCAAATTATCTCACACTT 59.816 40.000 0.00 0.00 37.17 3.16
254 255 4.702131 GGTGAAGCCAAATTATCTCACACT 59.298 41.667 0.00 0.00 37.17 3.55
255 256 4.702131 AGGTGAAGCCAAATTATCTCACAC 59.298 41.667 0.00 0.00 40.61 3.82
256 257 4.922206 AGGTGAAGCCAAATTATCTCACA 58.078 39.130 0.00 0.00 40.61 3.58
257 258 5.904362 AAGGTGAAGCCAAATTATCTCAC 57.096 39.130 0.00 0.00 40.61 3.51
258 259 6.009589 TCAAAGGTGAAGCCAAATTATCTCA 58.990 36.000 0.00 0.00 40.61 3.27
259 260 6.515272 TCAAAGGTGAAGCCAAATTATCTC 57.485 37.500 0.00 0.00 40.61 2.75
260 261 7.178983 TGAATCAAAGGTGAAGCCAAATTATCT 59.821 33.333 0.00 0.00 40.61 1.98
261 262 7.322664 TGAATCAAAGGTGAAGCCAAATTATC 58.677 34.615 0.00 0.00 40.61 1.75
262 263 7.243604 TGAATCAAAGGTGAAGCCAAATTAT 57.756 32.000 0.00 0.00 40.61 1.28
263 264 6.662865 TGAATCAAAGGTGAAGCCAAATTA 57.337 33.333 0.00 0.00 40.61 1.40
264 265 5.549742 TGAATCAAAGGTGAAGCCAAATT 57.450 34.783 0.00 0.00 40.61 1.82
265 266 5.299949 GTTGAATCAAAGGTGAAGCCAAAT 58.700 37.500 0.00 0.00 40.61 2.32
266 267 4.442753 GGTTGAATCAAAGGTGAAGCCAAA 60.443 41.667 0.00 0.00 40.61 3.28
267 268 3.069443 GGTTGAATCAAAGGTGAAGCCAA 59.931 43.478 0.00 0.00 40.61 4.52
268 269 2.627699 GGTTGAATCAAAGGTGAAGCCA 59.372 45.455 0.00 0.00 40.61 4.75
269 270 2.351738 CGGTTGAATCAAAGGTGAAGCC 60.352 50.000 0.00 0.00 37.30 4.35
270 271 2.293399 ACGGTTGAATCAAAGGTGAAGC 59.707 45.455 0.00 0.00 37.30 3.86
271 272 3.315191 ACACGGTTGAATCAAAGGTGAAG 59.685 43.478 24.78 7.78 37.30 3.02
272 273 3.283751 ACACGGTTGAATCAAAGGTGAA 58.716 40.909 24.78 0.00 37.30 3.18
273 274 2.925724 ACACGGTTGAATCAAAGGTGA 58.074 42.857 24.78 0.00 38.41 4.02
274 275 5.181245 AGAATACACGGTTGAATCAAAGGTG 59.819 40.000 19.52 19.52 35.98 4.00
275 276 5.313712 AGAATACACGGTTGAATCAAAGGT 58.686 37.500 0.00 0.00 0.00 3.50
276 277 5.163754 GGAGAATACACGGTTGAATCAAAGG 60.164 44.000 0.00 0.00 0.00 3.11
277 278 5.643777 AGGAGAATACACGGTTGAATCAAAG 59.356 40.000 0.00 0.00 0.00 2.77
278 279 5.556915 AGGAGAATACACGGTTGAATCAAA 58.443 37.500 0.00 0.00 0.00 2.69
279 280 5.160607 AGGAGAATACACGGTTGAATCAA 57.839 39.130 0.00 0.00 0.00 2.57
280 281 4.819105 AGGAGAATACACGGTTGAATCA 57.181 40.909 0.00 0.00 0.00 2.57
281 282 4.201822 GCAAGGAGAATACACGGTTGAATC 60.202 45.833 0.00 0.00 0.00 2.52
282 283 3.689649 GCAAGGAGAATACACGGTTGAAT 59.310 43.478 0.00 0.00 0.00 2.57
283 284 3.071479 GCAAGGAGAATACACGGTTGAA 58.929 45.455 0.00 0.00 0.00 2.69
284 285 2.695359 GCAAGGAGAATACACGGTTGA 58.305 47.619 0.00 0.00 0.00 3.18
285 286 1.393539 CGCAAGGAGAATACACGGTTG 59.606 52.381 0.00 0.00 0.00 3.77
286 287 1.001633 ACGCAAGGAGAATACACGGTT 59.998 47.619 0.00 0.00 46.39 4.44
287 288 0.606604 ACGCAAGGAGAATACACGGT 59.393 50.000 0.00 0.00 46.39 4.83
288 289 1.278238 GACGCAAGGAGAATACACGG 58.722 55.000 0.00 0.00 46.39 4.94
289 290 1.990799 TGACGCAAGGAGAATACACG 58.009 50.000 0.00 0.00 46.39 4.49
290 291 3.326747 AGTTGACGCAAGGAGAATACAC 58.673 45.455 0.00 0.00 46.39 2.90
291 292 3.678056 AGTTGACGCAAGGAGAATACA 57.322 42.857 0.00 0.00 46.39 2.29
292 293 4.246458 AGAAGTTGACGCAAGGAGAATAC 58.754 43.478 0.00 0.00 46.39 1.89
293 294 4.495422 GAGAAGTTGACGCAAGGAGAATA 58.505 43.478 0.00 0.00 46.39 1.75
294 295 3.330267 GAGAAGTTGACGCAAGGAGAAT 58.670 45.455 0.00 0.00 46.39 2.40
295 296 2.548067 GGAGAAGTTGACGCAAGGAGAA 60.548 50.000 0.00 0.00 46.39 2.87
296 297 1.000955 GGAGAAGTTGACGCAAGGAGA 59.999 52.381 0.00 0.00 46.39 3.71
297 298 1.270305 TGGAGAAGTTGACGCAAGGAG 60.270 52.381 0.00 0.00 46.39 3.69
298 299 0.756294 TGGAGAAGTTGACGCAAGGA 59.244 50.000 0.00 0.00 46.39 3.36
299 300 1.151668 CTGGAGAAGTTGACGCAAGG 58.848 55.000 0.00 0.00 46.39 3.61
300 301 1.871080 ACTGGAGAAGTTGACGCAAG 58.129 50.000 0.00 0.00 34.57 4.01
309 310 3.885901 GGCTCAAAAAGAACTGGAGAAGT 59.114 43.478 0.00 0.00 42.60 3.01
310 311 3.058639 CGGCTCAAAAAGAACTGGAGAAG 60.059 47.826 0.00 0.00 0.00 2.85
311 312 2.878406 CGGCTCAAAAAGAACTGGAGAA 59.122 45.455 0.00 0.00 0.00 2.87
312 313 2.494059 CGGCTCAAAAAGAACTGGAGA 58.506 47.619 0.00 0.00 0.00 3.71
313 314 1.068954 GCGGCTCAAAAAGAACTGGAG 60.069 52.381 0.00 0.00 0.00 3.86
314 315 0.951558 GCGGCTCAAAAAGAACTGGA 59.048 50.000 0.00 0.00 0.00 3.86
315 316 0.954452 AGCGGCTCAAAAAGAACTGG 59.046 50.000 0.00 0.00 0.00 4.00
316 317 1.876156 AGAGCGGCTCAAAAAGAACTG 59.124 47.619 29.88 0.00 32.06 3.16
317 318 2.262423 AGAGCGGCTCAAAAAGAACT 57.738 45.000 29.88 4.79 32.06 3.01
318 319 3.120165 CCTAAGAGCGGCTCAAAAAGAAC 60.120 47.826 29.88 2.04 32.06 3.01
319 320 3.074412 CCTAAGAGCGGCTCAAAAAGAA 58.926 45.455 29.88 7.56 32.06 2.52
320 321 2.699954 CCTAAGAGCGGCTCAAAAAGA 58.300 47.619 29.88 8.66 32.06 2.52
321 322 1.131315 GCCTAAGAGCGGCTCAAAAAG 59.869 52.381 29.88 19.48 44.17 2.27
322 323 1.165270 GCCTAAGAGCGGCTCAAAAA 58.835 50.000 29.88 12.10 44.17 1.94
323 324 2.854522 GCCTAAGAGCGGCTCAAAA 58.145 52.632 29.88 14.43 44.17 2.44
324 325 4.617875 GCCTAAGAGCGGCTCAAA 57.382 55.556 29.88 16.80 44.17 2.69
332 333 2.355244 CCGCTAGCGCCTAAGAGC 60.355 66.667 31.35 4.70 39.42 4.09
333 334 2.136196 CTCCCGCTAGCGCCTAAGAG 62.136 65.000 31.35 23.35 38.24 2.85
334 335 2.124024 TCCCGCTAGCGCCTAAGA 60.124 61.111 31.35 17.82 38.24 2.10
335 336 2.336809 CTCCCGCTAGCGCCTAAG 59.663 66.667 31.35 19.29 38.24 2.18
336 337 3.912907 GCTCCCGCTAGCGCCTAA 61.913 66.667 31.35 14.23 38.24 2.69
340 341 3.441011 TAAAGGCTCCCGCTAGCGC 62.441 63.158 31.35 17.29 43.74 5.92
341 342 1.300233 CTAAAGGCTCCCGCTAGCG 60.300 63.158 29.93 29.93 43.74 4.26
342 343 1.038280 TACTAAAGGCTCCCGCTAGC 58.962 55.000 4.06 4.06 41.99 3.42
343 344 1.001597 CGTACTAAAGGCTCCCGCTAG 60.002 57.143 0.00 0.00 36.09 3.42
344 345 1.027357 CGTACTAAAGGCTCCCGCTA 58.973 55.000 0.00 0.00 36.09 4.26
345 346 1.814527 CGTACTAAAGGCTCCCGCT 59.185 57.895 0.00 0.00 36.09 5.52
346 347 1.881709 GCGTACTAAAGGCTCCCGC 60.882 63.158 0.00 0.00 36.05 6.13
347 348 1.814527 AGCGTACTAAAGGCTCCCG 59.185 57.895 0.00 0.00 46.14 5.14
352 353 3.490590 GGGAGTAAGAGCGTACTAAAGGC 60.491 52.174 0.00 0.00 34.40 4.35
353 354 3.952967 AGGGAGTAAGAGCGTACTAAAGG 59.047 47.826 0.00 0.00 34.40 3.11
354 355 4.036616 GGAGGGAGTAAGAGCGTACTAAAG 59.963 50.000 0.00 0.00 34.40 1.85
355 356 3.950395 GGAGGGAGTAAGAGCGTACTAAA 59.050 47.826 0.00 0.00 34.40 1.85
356 357 3.549794 GGAGGGAGTAAGAGCGTACTAA 58.450 50.000 0.00 0.00 34.40 2.24
357 358 2.484417 CGGAGGGAGTAAGAGCGTACTA 60.484 54.545 0.00 0.00 34.40 1.82
358 359 1.746516 CGGAGGGAGTAAGAGCGTACT 60.747 57.143 0.00 0.00 37.02 2.73
359 360 0.662085 CGGAGGGAGTAAGAGCGTAC 59.338 60.000 0.00 0.00 0.00 3.67
360 361 0.254178 ACGGAGGGAGTAAGAGCGTA 59.746 55.000 0.00 0.00 0.00 4.42
361 362 1.001145 ACGGAGGGAGTAAGAGCGT 60.001 57.895 0.00 0.00 0.00 5.07
362 363 1.726533 GGACGGAGGGAGTAAGAGCG 61.727 65.000 0.00 0.00 0.00 5.03
363 364 1.726533 CGGACGGAGGGAGTAAGAGC 61.727 65.000 0.00 0.00 0.00 4.09
364 365 1.726533 GCGGACGGAGGGAGTAAGAG 61.727 65.000 0.00 0.00 0.00 2.85
365 366 1.751927 GCGGACGGAGGGAGTAAGA 60.752 63.158 0.00 0.00 0.00 2.10
366 367 2.806237 GCGGACGGAGGGAGTAAG 59.194 66.667 0.00 0.00 0.00 2.34
367 368 3.136123 CGCGGACGGAGGGAGTAA 61.136 66.667 0.00 0.00 34.97 2.24
368 369 2.898920 ATTCGCGGACGGAGGGAGTA 62.899 60.000 6.13 0.00 40.63 2.59
369 370 2.898920 TATTCGCGGACGGAGGGAGT 62.899 60.000 6.13 0.00 40.63 3.85
370 371 1.731433 TTATTCGCGGACGGAGGGAG 61.731 60.000 6.13 0.00 40.63 4.30
371 372 1.731433 CTTATTCGCGGACGGAGGGA 61.731 60.000 6.13 0.00 40.63 4.20
372 373 1.299926 CTTATTCGCGGACGGAGGG 60.300 63.158 6.13 0.00 40.63 4.30
373 374 0.870307 CACTTATTCGCGGACGGAGG 60.870 60.000 6.13 0.00 40.63 4.30
374 375 0.179145 ACACTTATTCGCGGACGGAG 60.179 55.000 6.13 0.00 40.63 4.63
375 376 1.093972 TACACTTATTCGCGGACGGA 58.906 50.000 6.13 0.00 40.63 4.69
376 377 1.194495 GTACACTTATTCGCGGACGG 58.806 55.000 6.13 0.00 40.63 4.79
377 378 1.898938 TGTACACTTATTCGCGGACG 58.101 50.000 6.13 0.00 42.01 4.79
378 379 3.703420 AGATGTACACTTATTCGCGGAC 58.297 45.455 6.13 0.00 0.00 4.79
379 380 4.556104 GCTAGATGTACACTTATTCGCGGA 60.556 45.833 6.13 0.00 0.00 5.54
380 381 3.669122 GCTAGATGTACACTTATTCGCGG 59.331 47.826 6.13 0.00 0.00 6.46
381 382 4.537965 AGCTAGATGTACACTTATTCGCG 58.462 43.478 0.00 0.00 0.00 5.87
382 383 6.830114 AAAGCTAGATGTACACTTATTCGC 57.170 37.500 0.00 0.00 0.00 4.70
383 384 8.186178 ACAAAAGCTAGATGTACACTTATTCG 57.814 34.615 0.00 0.00 0.00 3.34
384 385 9.372369 AGACAAAAGCTAGATGTACACTTATTC 57.628 33.333 0.00 0.00 0.00 1.75
385 386 9.726438 AAGACAAAAGCTAGATGTACACTTATT 57.274 29.630 0.00 0.00 0.00 1.40
388 389 9.209175 CTTAAGACAAAAGCTAGATGTACACTT 57.791 33.333 0.00 0.00 0.00 3.16
389 390 8.368668 ACTTAAGACAAAAGCTAGATGTACACT 58.631 33.333 10.09 0.13 0.00 3.55
390 391 8.535690 ACTTAAGACAAAAGCTAGATGTACAC 57.464 34.615 10.09 0.00 0.00 2.90
394 395 8.709646 CGTTAACTTAAGACAAAAGCTAGATGT 58.290 33.333 10.09 0.00 0.00 3.06
395 396 8.709646 ACGTTAACTTAAGACAAAAGCTAGATG 58.290 33.333 10.09 0.00 0.00 2.90
396 397 8.709646 CACGTTAACTTAAGACAAAAGCTAGAT 58.290 33.333 10.09 0.00 0.00 1.98
397 398 7.707893 ACACGTTAACTTAAGACAAAAGCTAGA 59.292 33.333 10.09 0.00 0.00 2.43
398 399 7.848491 ACACGTTAACTTAAGACAAAAGCTAG 58.152 34.615 10.09 0.00 0.00 3.42
399 400 7.775397 ACACGTTAACTTAAGACAAAAGCTA 57.225 32.000 10.09 0.00 0.00 3.32
400 401 6.673154 ACACGTTAACTTAAGACAAAAGCT 57.327 33.333 10.09 0.00 0.00 3.74
401 402 8.825064 TTAACACGTTAACTTAAGACAAAAGC 57.175 30.769 10.09 0.00 30.78 3.51
410 411 9.432077 GGTCGAAATTTTAACACGTTAACTTAA 57.568 29.630 3.71 0.00 35.05 1.85
411 412 8.607459 TGGTCGAAATTTTAACACGTTAACTTA 58.393 29.630 3.71 0.00 35.05 2.24
412 413 7.470900 TGGTCGAAATTTTAACACGTTAACTT 58.529 30.769 3.71 0.00 35.05 2.66
413 414 7.014092 TGGTCGAAATTTTAACACGTTAACT 57.986 32.000 3.71 0.00 35.05 2.24
414 415 7.429051 AGTTGGTCGAAATTTTAACACGTTAAC 59.571 33.333 1.89 0.00 35.05 2.01
415 416 7.470900 AGTTGGTCGAAATTTTAACACGTTAA 58.529 30.769 0.00 0.00 33.63 2.01
416 417 7.014092 AGTTGGTCGAAATTTTAACACGTTA 57.986 32.000 0.00 0.00 0.00 3.18
417 418 5.882553 AGTTGGTCGAAATTTTAACACGTT 58.117 33.333 0.00 0.00 0.00 3.99
418 419 5.488645 AGTTGGTCGAAATTTTAACACGT 57.511 34.783 0.00 0.00 0.00 4.49
419 420 6.689669 AGAAAGTTGGTCGAAATTTTAACACG 59.310 34.615 0.00 0.00 32.09 4.49
420 421 7.980742 AGAAAGTTGGTCGAAATTTTAACAC 57.019 32.000 0.00 0.00 32.09 3.32
421 422 9.724839 CTTAGAAAGTTGGTCGAAATTTTAACA 57.275 29.630 0.00 0.00 32.09 2.41
422 423 9.940166 TCTTAGAAAGTTGGTCGAAATTTTAAC 57.060 29.630 0.00 0.00 32.09 2.01
425 426 9.863845 TTTTCTTAGAAAGTTGGTCGAAATTTT 57.136 25.926 7.49 0.00 32.09 1.82
426 427 9.863845 TTTTTCTTAGAAAGTTGGTCGAAATTT 57.136 25.926 7.49 0.00 34.59 1.82
427 428 9.516314 CTTTTTCTTAGAAAGTTGGTCGAAATT 57.484 29.630 7.49 0.00 31.17 1.82
428 429 8.683615 ACTTTTTCTTAGAAAGTTGGTCGAAAT 58.316 29.630 7.49 0.00 42.90 2.17
429 430 8.047413 ACTTTTTCTTAGAAAGTTGGTCGAAA 57.953 30.769 7.49 0.00 42.90 3.46
430 431 7.619964 ACTTTTTCTTAGAAAGTTGGTCGAA 57.380 32.000 7.49 0.00 42.90 3.71
431 432 8.721019 TTACTTTTTCTTAGAAAGTTGGTCGA 57.279 30.769 7.49 0.00 42.90 4.20
432 433 9.777575 TTTTACTTTTTCTTAGAAAGTTGGTCG 57.222 29.630 7.49 0.00 42.90 4.79
434 435 9.582431 GCTTTTACTTTTTCTTAGAAAGTTGGT 57.418 29.630 7.49 7.91 42.90 3.67
435 436 9.581099 TGCTTTTACTTTTTCTTAGAAAGTTGG 57.419 29.630 7.49 3.01 42.90 3.77
467 468 9.862371 CGGATCTAGTGATATTAATTTAGTGCT 57.138 33.333 0.00 0.00 32.19 4.40
468 469 9.640963 ACGGATCTAGTGATATTAATTTAGTGC 57.359 33.333 0.00 0.00 32.19 4.40
478 479 9.396022 ACATTTCAAAACGGATCTAGTGATATT 57.604 29.630 0.00 0.00 32.19 1.28
479 480 8.964476 ACATTTCAAAACGGATCTAGTGATAT 57.036 30.769 0.00 0.00 32.19 1.63
480 481 9.309516 GTACATTTCAAAACGGATCTAGTGATA 57.690 33.333 0.00 0.00 32.19 2.15
481 482 8.041323 AGTACATTTCAAAACGGATCTAGTGAT 58.959 33.333 0.00 0.00 35.26 3.06
482 483 7.383687 AGTACATTTCAAAACGGATCTAGTGA 58.616 34.615 0.00 0.00 0.00 3.41
483 484 7.596749 AGTACATTTCAAAACGGATCTAGTG 57.403 36.000 0.00 0.00 0.00 2.74
484 485 8.617290 AAAGTACATTTCAAAACGGATCTAGT 57.383 30.769 0.00 0.00 0.00 2.57
589 590 9.321562 CGAATAGGTGTACATATAGTTTTTGGT 57.678 33.333 0.00 0.00 0.00 3.67
590 591 8.280497 GCGAATAGGTGTACATATAGTTTTTGG 58.720 37.037 0.00 0.00 0.00 3.28
591 592 8.002107 CGCGAATAGGTGTACATATAGTTTTTG 58.998 37.037 0.00 0.00 0.00 2.44
592 593 7.170320 CCGCGAATAGGTGTACATATAGTTTTT 59.830 37.037 8.23 0.00 0.00 1.94
593 594 6.643770 CCGCGAATAGGTGTACATATAGTTTT 59.356 38.462 8.23 0.00 0.00 2.43
594 595 6.016024 TCCGCGAATAGGTGTACATATAGTTT 60.016 38.462 8.23 0.00 0.00 2.66
595 596 5.474532 TCCGCGAATAGGTGTACATATAGTT 59.525 40.000 8.23 0.00 0.00 2.24
596 597 5.005740 TCCGCGAATAGGTGTACATATAGT 58.994 41.667 8.23 0.00 0.00 2.12
597 598 5.330295 GTCCGCGAATAGGTGTACATATAG 58.670 45.833 8.23 0.00 0.00 1.31
598 599 4.142838 CGTCCGCGAATAGGTGTACATATA 60.143 45.833 8.23 0.00 41.33 0.86
599 600 3.365666 CGTCCGCGAATAGGTGTACATAT 60.366 47.826 8.23 0.00 41.33 1.78
600 601 2.031769 CGTCCGCGAATAGGTGTACATA 60.032 50.000 8.23 0.00 41.33 2.29
601 602 1.268896 CGTCCGCGAATAGGTGTACAT 60.269 52.381 8.23 0.00 41.33 2.29
602 603 0.099259 CGTCCGCGAATAGGTGTACA 59.901 55.000 8.23 0.00 41.33 2.90
603 604 0.593263 CCGTCCGCGAATAGGTGTAC 60.593 60.000 8.23 0.00 41.33 2.90
604 605 0.747644 TCCGTCCGCGAATAGGTGTA 60.748 55.000 8.23 0.00 41.33 2.90
605 606 2.001361 CTCCGTCCGCGAATAGGTGT 62.001 60.000 8.23 0.00 41.33 4.16
606 607 1.299165 CTCCGTCCGCGAATAGGTG 60.299 63.158 8.23 2.51 41.33 4.00
607 608 2.487532 CCTCCGTCCGCGAATAGGT 61.488 63.158 8.23 0.00 41.33 3.08
608 609 2.335369 CCTCCGTCCGCGAATAGG 59.665 66.667 8.23 5.52 41.33 2.57
609 610 2.131294 CTCCCTCCGTCCGCGAATAG 62.131 65.000 8.23 0.00 41.33 1.73
610 611 2.124193 TCCCTCCGTCCGCGAATA 60.124 61.111 8.23 0.00 41.33 1.75
611 612 2.898920 TACTCCCTCCGTCCGCGAAT 62.899 60.000 8.23 0.00 41.33 3.34
612 613 2.898920 ATACTCCCTCCGTCCGCGAA 62.899 60.000 8.23 0.00 41.33 4.70
613 614 2.043604 TATACTCCCTCCGTCCGCGA 62.044 60.000 8.23 0.00 41.33 5.87
614 615 0.959372 ATATACTCCCTCCGTCCGCG 60.959 60.000 0.00 0.00 37.95 6.46
615 616 1.254954 AATATACTCCCTCCGTCCGC 58.745 55.000 0.00 0.00 0.00 5.54
616 617 3.155501 AGAAATATACTCCCTCCGTCCG 58.844 50.000 0.00 0.00 0.00 4.79
617 618 5.548181 AAAGAAATATACTCCCTCCGTCC 57.452 43.478 0.00 0.00 0.00 4.79
618 619 6.492772 TCCTAAAGAAATATACTCCCTCCGTC 59.507 42.308 0.00 0.00 0.00 4.79
619 620 6.379579 TCCTAAAGAAATATACTCCCTCCGT 58.620 40.000 0.00 0.00 0.00 4.69
620 621 6.912951 TCCTAAAGAAATATACTCCCTCCG 57.087 41.667 0.00 0.00 0.00 4.63
621 622 8.493787 TCTTCCTAAAGAAATATACTCCCTCC 57.506 38.462 0.00 0.00 38.58 4.30
643 644 6.567959 GCCGTGGTTTAACTAGTAGTATCTT 58.432 40.000 2.50 0.00 0.00 2.40
647 648 4.006989 TCGCCGTGGTTTAACTAGTAGTA 58.993 43.478 2.50 0.00 0.00 1.82
649 650 3.492421 TCGCCGTGGTTTAACTAGTAG 57.508 47.619 0.00 0.00 0.00 2.57
662 663 0.390603 TGACAACCCTATTCGCCGTG 60.391 55.000 0.00 0.00 0.00 4.94
667 668 3.159353 TCGTGATGACAACCCTATTCG 57.841 47.619 0.00 0.00 0.00 3.34
679 680 2.927477 GGTTTTCGCACTATCGTGATGA 59.073 45.455 0.75 0.00 43.97 2.92
709 710 1.225368 CAACCGATGTTTCGCGACG 60.225 57.895 9.15 8.98 44.12 5.12
735 737 6.109359 CAGTTTTGGAAGTAGTCTAGGGATG 58.891 44.000 0.00 0.00 0.00 3.51
743 745 4.524749 GTTTCGCAGTTTTGGAAGTAGTC 58.475 43.478 0.00 0.00 0.00 2.59
986 1009 1.003442 TCCATGACTCCCCCTCTGG 59.997 63.158 0.00 0.00 0.00 3.86
988 1011 1.231751 TCCTCCATGACTCCCCCTCT 61.232 60.000 0.00 0.00 0.00 3.69
1032 1062 4.135153 CTCGTGCTCCCCTCACCG 62.135 72.222 0.00 0.00 0.00 4.94
1033 1063 4.459089 GCTCGTGCTCCCCTCACC 62.459 72.222 1.41 0.00 36.03 4.02
1205 1235 0.037590 GGTTACCATCCACACAGCCA 59.962 55.000 0.00 0.00 0.00 4.75
1274 1319 4.820716 CCAATTTTCAAACAAATCCTGGCA 59.179 37.500 0.00 0.00 0.00 4.92
1275 1320 4.216042 CCCAATTTTCAAACAAATCCTGGC 59.784 41.667 0.00 0.00 28.44 4.85
1276 1321 5.619220 TCCCAATTTTCAAACAAATCCTGG 58.381 37.500 0.00 0.00 0.00 4.45
1277 1322 5.702209 CCTCCCAATTTTCAAACAAATCCTG 59.298 40.000 0.00 0.00 0.00 3.86
1278 1323 5.221904 CCCTCCCAATTTTCAAACAAATCCT 60.222 40.000 0.00 0.00 0.00 3.24
1279 1324 5.003160 CCCTCCCAATTTTCAAACAAATCC 58.997 41.667 0.00 0.00 0.00 3.01
1280 1325 5.620206 ACCCTCCCAATTTTCAAACAAATC 58.380 37.500 0.00 0.00 0.00 2.17
1281 1326 5.645056 ACCCTCCCAATTTTCAAACAAAT 57.355 34.783 0.00 0.00 0.00 2.32
1282 1327 5.900123 TCTACCCTCCCAATTTTCAAACAAA 59.100 36.000 0.00 0.00 0.00 2.83
1283 1328 5.459505 TCTACCCTCCCAATTTTCAAACAA 58.540 37.500 0.00 0.00 0.00 2.83
1284 1329 5.068215 TCTACCCTCCCAATTTTCAAACA 57.932 39.130 0.00 0.00 0.00 2.83
1285 1330 6.266786 TCTTTCTACCCTCCCAATTTTCAAAC 59.733 38.462 0.00 0.00 0.00 2.93
1300 1345 9.682465 AAATTCCAACTATTAGTCTTTCTACCC 57.318 33.333 0.00 0.00 0.00 3.69
1364 1409 6.469139 AAAGAAGCTACTTCGTTAAAGCTC 57.531 37.500 6.71 0.00 44.30 4.09
1462 1824 2.146342 CTCAAGAAGCCTTCGCAAAGA 58.854 47.619 0.00 0.00 37.52 2.52
1722 2972 2.355513 CCAAGTCTCAGCAAGGTAGCAT 60.356 50.000 0.00 0.00 36.85 3.79
1723 2973 1.002430 CCAAGTCTCAGCAAGGTAGCA 59.998 52.381 0.00 0.00 36.85 3.49
1833 3163 4.256920 GTTAACCTGACATGTCATGCTCT 58.743 43.478 28.00 15.33 39.13 4.09
1932 3276 6.821665 GGTTTATATCTAGCAGACACCAACAA 59.178 38.462 0.00 0.00 0.00 2.83
1934 3278 5.758784 GGGTTTATATCTAGCAGACACCAAC 59.241 44.000 0.00 0.00 0.00 3.77
2045 3389 0.967380 AAGAGGAAATTGCAGGCCCG 60.967 55.000 0.00 0.00 0.00 6.13
2056 3400 3.072476 CACTAGGGTGGTCAAAGAGGAAA 59.928 47.826 0.00 0.00 39.59 3.13
2263 3682 9.188588 GATATATGCTTGGTTTCATGTCATTTG 57.811 33.333 0.00 0.00 0.00 2.32
2278 3697 3.340814 AGAAGGGGCGATATATGCTTG 57.659 47.619 0.00 0.00 0.00 4.01
2283 3702 5.193679 GGCAATTTAGAAGGGGCGATATAT 58.806 41.667 0.00 0.00 0.00 0.86
2284 3703 4.042311 TGGCAATTTAGAAGGGGCGATATA 59.958 41.667 0.00 0.00 0.00 0.86
2430 3851 6.491403 GCAGGATTACCAAATATGAATCCAGT 59.509 38.462 13.45 0.00 46.60 4.00
3262 4696 6.047870 AGCACATTTTTGTAACAATGCTGAA 58.952 32.000 4.54 0.00 40.51 3.02
3316 4751 2.873472 TGGGTTGCAACAAGTTACTACG 59.127 45.455 29.55 0.00 0.00 3.51
3390 4826 6.813293 TGTCATCCTTCAAATCTCCAGATA 57.187 37.500 0.00 0.00 33.73 1.98
3586 5046 8.642885 CATCATCAATCTAAACAGACGTATAGC 58.357 37.037 0.00 0.00 0.00 2.97
3629 5089 1.099879 GTCCATCCATGCTGTCCTGC 61.100 60.000 0.00 0.00 0.00 4.85
3830 5290 4.574828 GCTATTCCGAACAGCTATTCCAAA 59.425 41.667 4.06 0.00 32.46 3.28
3831 5291 4.127171 GCTATTCCGAACAGCTATTCCAA 58.873 43.478 4.06 0.00 32.46 3.53
3832 5292 3.133901 TGCTATTCCGAACAGCTATTCCA 59.866 43.478 12.47 0.00 36.26 3.53
3833 5293 3.728845 TGCTATTCCGAACAGCTATTCC 58.271 45.455 12.47 0.00 36.26 3.01
3834 5294 4.752101 ACATGCTATTCCGAACAGCTATTC 59.248 41.667 12.47 0.00 36.26 1.75
3835 5295 4.708177 ACATGCTATTCCGAACAGCTATT 58.292 39.130 12.47 0.00 36.26 1.73
3836 5296 4.342862 ACATGCTATTCCGAACAGCTAT 57.657 40.909 12.47 2.46 36.26 2.97
3837 5297 3.819564 ACATGCTATTCCGAACAGCTA 57.180 42.857 12.47 0.23 36.26 3.32
3838 5298 2.698855 ACATGCTATTCCGAACAGCT 57.301 45.000 12.47 0.00 36.26 4.24
3839 5299 5.120830 CCTATAACATGCTATTCCGAACAGC 59.879 44.000 4.35 4.35 35.82 4.40
3840 5300 5.639506 CCCTATAACATGCTATTCCGAACAG 59.360 44.000 0.00 0.00 0.00 3.16
3841 5301 5.512404 CCCCTATAACATGCTATTCCGAACA 60.512 44.000 0.00 0.00 0.00 3.18
3842 5302 4.935808 CCCCTATAACATGCTATTCCGAAC 59.064 45.833 0.00 0.00 0.00 3.95
3920 5380 6.543465 TGGCTACAAACTCCAATTATCATCAG 59.457 38.462 0.00 0.00 0.00 2.90
3939 5399 7.934457 ACACATCATTCAAGAATATTGGCTAC 58.066 34.615 0.00 0.00 0.00 3.58
4081 5541 7.442656 CCTTAACACCCGAATATATGAGAAGT 58.557 38.462 0.00 0.00 0.00 3.01
4167 5627 5.970317 AGCAATTCATTGAATCTGTGACA 57.030 34.783 12.15 0.00 40.14 3.58
4200 5660 4.768448 TCAGAACAAATCAGCCATCACAAT 59.232 37.500 0.00 0.00 0.00 2.71
4419 5893 5.129634 TGACAACATCTGCCAAGAAAAGTA 58.870 37.500 0.00 0.00 35.59 2.24
4438 5912 8.715191 ATTTTGAAAAGTATTGTGCTTTGACA 57.285 26.923 0.00 0.00 36.43 3.58
4493 5967 6.109359 ACACAATCCAAAAGTAGCTAGCTAG 58.891 40.000 24.78 16.84 0.00 3.42
4770 6253 7.039082 CCATATAAACCAATATCAAAGGGTGGG 60.039 40.741 0.00 0.00 33.00 4.61
4785 6268 5.158141 AGGATCTGCTCTCCATATAAACCA 58.842 41.667 0.00 0.00 35.08 3.67
4937 6425 1.429825 CCGCGTCAAAACACAACCA 59.570 52.632 4.92 0.00 0.00 3.67
4943 6431 2.824489 TGGTGCCGCGTCAAAACA 60.824 55.556 4.92 0.00 0.00 2.83
4944 6432 2.051345 CTGGTGCCGCGTCAAAAC 60.051 61.111 4.92 0.00 0.00 2.43
5380 6885 0.037590 TCAACAATGTTCCTCGGGGG 59.962 55.000 0.00 0.00 0.00 5.40
5381 6886 2.128771 ATCAACAATGTTCCTCGGGG 57.871 50.000 0.00 0.00 0.00 5.73
5382 6887 2.819608 ACAATCAACAATGTTCCTCGGG 59.180 45.455 0.00 0.00 0.00 5.14
5383 6888 3.753272 AGACAATCAACAATGTTCCTCGG 59.247 43.478 0.00 0.00 0.00 4.63
5392 6897 4.337555 GCCATCAGCTAGACAATCAACAAT 59.662 41.667 0.00 0.00 38.99 2.71
5640 7624 8.910351 ACAAATAAGAATAGACCTTATGAGCC 57.090 34.615 0.00 0.00 37.04 4.70
5671 7655 6.539649 TGTAAAGTAGCACTTGTGTCATTC 57.460 37.500 2.61 0.00 38.66 2.67
5677 7661 9.494479 CAATCATAATGTAAAGTAGCACTTGTG 57.506 33.333 2.88 0.00 38.66 3.33
5678 7662 9.448438 TCAATCATAATGTAAAGTAGCACTTGT 57.552 29.630 2.88 0.00 38.66 3.16
5692 7676 9.491675 TGTTTCAGCAAATTTCAATCATAATGT 57.508 25.926 0.00 0.00 0.00 2.71
5696 7680 7.599621 CACCTGTTTCAGCAAATTTCAATCATA 59.400 33.333 0.00 0.00 0.00 2.15
5697 7681 6.425721 CACCTGTTTCAGCAAATTTCAATCAT 59.574 34.615 0.00 0.00 0.00 2.45
5698 7682 5.754406 CACCTGTTTCAGCAAATTTCAATCA 59.246 36.000 0.00 0.00 0.00 2.57
5699 7683 5.333568 GCACCTGTTTCAGCAAATTTCAATC 60.334 40.000 0.00 0.00 0.00 2.67
5700 7684 4.512571 GCACCTGTTTCAGCAAATTTCAAT 59.487 37.500 0.00 0.00 0.00 2.57
5931 8917 5.186603 TGGTAAACATGCATGCCTTATTCAA 59.813 36.000 26.53 4.97 0.00 2.69
5952 8969 2.676748 TGGTCAAAGCTGGATTTTGGT 58.323 42.857 0.00 0.00 36.44 3.67
6065 10828 4.195416 TGCACGCACCTCAATAATTATGA 58.805 39.130 0.00 0.00 0.00 2.15
6070 10833 3.312421 GTGTATGCACGCACCTCAATAAT 59.688 43.478 10.41 0.00 35.75 1.28
6071 10834 2.675844 GTGTATGCACGCACCTCAATAA 59.324 45.455 10.41 0.00 35.75 1.40
6072 10835 2.276201 GTGTATGCACGCACCTCAATA 58.724 47.619 10.41 0.00 35.75 1.90
6073 10836 1.086696 GTGTATGCACGCACCTCAAT 58.913 50.000 10.41 0.00 35.75 2.57
6074 10837 2.539003 GTGTATGCACGCACCTCAA 58.461 52.632 10.41 0.00 35.75 3.02
6075 10838 4.277239 GTGTATGCACGCACCTCA 57.723 55.556 10.41 0.00 35.75 3.86
6186 10985 9.988350 CCCTATATGCGCAAAATAATTTAGTAG 57.012 33.333 17.11 2.93 0.00 2.57
6269 11069 2.422597 ACCGACTTGCGATTTCAATGA 58.577 42.857 0.00 0.00 44.57 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.