Multiple sequence alignment - TraesCS2A01G221400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G221400 chr2A 100.000 3672 0 0 1 3672 211336797 211333126 0.000000e+00 6782.0
1 TraesCS2A01G221400 chr2A 90.476 1050 77 14 931 1957 690910187 690911236 0.000000e+00 1363.0
2 TraesCS2A01G221400 chr2A 85.779 443 36 13 2357 2772 690911567 690912009 9.360000e-121 444.0
3 TraesCS2A01G221400 chr2A 95.588 68 2 1 305 372 767780423 767780489 1.390000e-19 108.0
4 TraesCS2A01G221400 chr2D 94.521 1314 48 12 670 1982 195731795 195730505 0.000000e+00 2006.0
5 TraesCS2A01G221400 chr2D 92.432 1110 36 22 1968 3076 195728787 195727725 0.000000e+00 1541.0
6 TraesCS2A01G221400 chr2D 87.520 1234 119 26 756 1957 548259588 548258358 0.000000e+00 1393.0
7 TraesCS2A01G221400 chr2D 88.983 590 36 9 3092 3672 195727741 195727172 0.000000e+00 702.0
8 TraesCS2A01G221400 chr2D 84.211 589 50 18 2357 2905 548258014 548257429 1.940000e-147 532.0
9 TraesCS2A01G221400 chr2D 95.486 288 12 1 23 310 540821229 540821515 3.340000e-125 459.0
10 TraesCS2A01G221400 chr2D 86.100 259 23 8 437 693 195738728 195738481 2.170000e-67 267.0
11 TraesCS2A01G221400 chr2B 85.662 1911 171 61 931 2774 655216414 655214540 0.000000e+00 1916.0
12 TraesCS2A01G221400 chr2B 83.955 268 33 7 3410 3672 432975095 432975357 7.870000e-62 248.0
13 TraesCS2A01G221400 chr2B 97.015 67 2 0 305 371 608940737 608940671 3.000000e-21 113.0
14 TraesCS2A01G221400 chr6D 91.429 1015 68 9 961 1956 454649448 454648434 0.000000e+00 1375.0
15 TraesCS2A01G221400 chr6D 90.700 1000 80 6 976 1965 454653854 454654850 0.000000e+00 1319.0
16 TraesCS2A01G221400 chr6D 82.982 711 82 20 2022 2711 454648408 454647716 1.130000e-169 606.0
17 TraesCS2A01G221400 chr6D 83.084 668 93 15 2049 2711 454654887 454655539 1.140000e-164 590.0
18 TraesCS2A01G221400 chr6B 91.583 998 74 3 976 1963 691338755 691337758 0.000000e+00 1369.0
19 TraesCS2A01G221400 chr6B 90.817 991 78 6 976 1956 691617326 691618313 0.000000e+00 1314.0
20 TraesCS2A01G221400 chr6B 83.258 663 69 28 2057 2711 691337697 691337069 4.110000e-159 571.0
21 TraesCS2A01G221400 chr6B 95.122 287 14 0 21 307 149443087 149443373 1.550000e-123 453.0
22 TraesCS2A01G221400 chr6B 87.611 339 33 1 2357 2695 691627346 691627675 5.750000e-103 385.0
23 TraesCS2A01G221400 chrUn 90.476 1050 77 14 931 1957 319538839 319537790 0.000000e+00 1363.0
24 TraesCS2A01G221400 chrUn 85.779 443 36 13 2357 2772 307429069 307428627 9.360000e-121 444.0
25 TraesCS2A01G221400 chr5D 90.122 982 80 10 996 1965 372566635 372567611 0.000000e+00 1260.0
26 TraesCS2A01G221400 chr5D 95.205 292 12 2 18 309 430510216 430510505 9.290000e-126 460.0
27 TraesCS2A01G221400 chr5D 87.675 357 44 0 2357 2713 372567927 372568283 2.040000e-112 416.0
28 TraesCS2A01G221400 chr6A 89.700 1000 84 6 976 1965 600884181 600885171 0.000000e+00 1258.0
29 TraesCS2A01G221400 chr6A 89.076 357 39 0 2357 2713 600885495 600885851 9.360000e-121 444.0
30 TraesCS2A01G221400 chr6A 96.970 66 2 0 305 370 373727992 373728057 1.080000e-20 111.0
31 TraesCS2A01G221400 chr6A 96.923 65 2 0 305 369 615672799 615672863 3.880000e-20 110.0
32 TraesCS2A01G221400 chr6A 91.463 82 2 5 305 384 566423898 566423820 1.390000e-19 108.0
33 TraesCS2A01G221400 chr5B 95.819 287 11 1 21 307 671039516 671039801 2.580000e-126 462.0
34 TraesCS2A01G221400 chr3B 95.804 286 12 0 23 308 17350571 17350286 2.580000e-126 462.0
35 TraesCS2A01G221400 chr3B 95.760 283 12 0 23 305 58625926 58625644 1.200000e-124 457.0
36 TraesCS2A01G221400 chr3B 94.521 292 15 1 23 314 776467923 776467633 2.010000e-122 449.0
37 TraesCS2A01G221400 chr7A 95.139 288 14 0 23 310 170685911 170685624 4.320000e-124 455.0
38 TraesCS2A01G221400 chr7A 96.970 66 2 0 305 370 124501720 124501655 1.080000e-20 111.0
39 TraesCS2A01G221400 chr1A 94.237 295 16 1 17 310 41902253 41902547 2.010000e-122 449.0
40 TraesCS2A01G221400 chr1A 86.207 87 9 3 3588 3672 302569749 302569834 1.400000e-14 91.6
41 TraesCS2A01G221400 chr7B 98.462 65 1 0 305 369 496102836 496102900 8.330000e-22 115.0
42 TraesCS2A01G221400 chr4D 96.970 66 2 0 305 370 334729529 334729594 1.080000e-20 111.0
43 TraesCS2A01G221400 chr3D 94.366 71 4 0 305 375 528951230 528951160 3.880000e-20 110.0
44 TraesCS2A01G221400 chr1B 92.537 67 4 1 3607 3672 334903372 334903306 1.090000e-15 95.3
45 TraesCS2A01G221400 chr1D 88.732 71 6 2 3603 3672 238649518 238649587 6.530000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G221400 chr2A 211333126 211336797 3671 True 6782.000000 6782 100.000000 1 3672 1 chr2A.!!$R1 3671
1 TraesCS2A01G221400 chr2A 690910187 690912009 1822 False 903.500000 1363 88.127500 931 2772 2 chr2A.!!$F2 1841
2 TraesCS2A01G221400 chr2D 195727172 195731795 4623 True 1416.333333 2006 91.978667 670 3672 3 chr2D.!!$R2 3002
3 TraesCS2A01G221400 chr2D 548257429 548259588 2159 True 962.500000 1393 85.865500 756 2905 2 chr2D.!!$R3 2149
4 TraesCS2A01G221400 chr2B 655214540 655216414 1874 True 1916.000000 1916 85.662000 931 2774 1 chr2B.!!$R2 1843
5 TraesCS2A01G221400 chr6D 454647716 454649448 1732 True 990.500000 1375 87.205500 961 2711 2 chr6D.!!$R1 1750
6 TraesCS2A01G221400 chr6D 454653854 454655539 1685 False 954.500000 1319 86.892000 976 2711 2 chr6D.!!$F1 1735
7 TraesCS2A01G221400 chr6B 691617326 691618313 987 False 1314.000000 1314 90.817000 976 1956 1 chr6B.!!$F2 980
8 TraesCS2A01G221400 chr6B 691337069 691338755 1686 True 970.000000 1369 87.420500 976 2711 2 chr6B.!!$R1 1735
9 TraesCS2A01G221400 chrUn 319537790 319538839 1049 True 1363.000000 1363 90.476000 931 1957 1 chrUn.!!$R2 1026
10 TraesCS2A01G221400 chr5D 372566635 372568283 1648 False 838.000000 1260 88.898500 996 2713 2 chr5D.!!$F2 1717
11 TraesCS2A01G221400 chr6A 600884181 600885851 1670 False 851.000000 1258 89.388000 976 2713 2 chr6A.!!$F3 1737

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
366 367 0.031616 TTTGGAACCAAACAGGCCCT 60.032 50.0 14.02 0.0 43.14 5.19 F
367 368 0.031616 TTGGAACCAAACAGGCCCTT 60.032 50.0 0.00 0.0 43.14 3.95 F
751 752 0.035152 ACGGGCAAGCAGATCAATCA 60.035 50.0 0.00 0.0 0.00 2.57 F
918 937 0.457851 ACACGCTCATGCTCTCCTAC 59.542 55.0 0.00 0.0 36.97 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2000 3808 0.586319 ACTTGTTGCCGATTGTCGTG 59.414 50.000 0.00 0.0 38.40 4.35 R
2294 4163 1.202076 GCTGATGCTTTCTACGGTTGC 60.202 52.381 0.00 0.0 36.03 4.17 R
2390 4278 0.037326 TCCTGAAAGATGCTCGCGTT 60.037 50.000 5.77 0.0 34.07 4.84 R
2713 4623 1.272369 TGCAATGCTGTAATGGGACCA 60.272 47.619 6.82 0.0 0.00 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.268720 GTTGGGTCTGTTGGGCAA 57.731 55.556 0.00 0.00 0.00 4.52
18 19 2.510664 GTTGGGTCTGTTGGGCAAA 58.489 52.632 0.00 0.00 0.00 3.68
19 20 0.827368 GTTGGGTCTGTTGGGCAAAA 59.173 50.000 0.00 0.00 0.00 2.44
20 21 1.416030 GTTGGGTCTGTTGGGCAAAAT 59.584 47.619 0.00 0.00 0.00 1.82
21 22 2.630580 GTTGGGTCTGTTGGGCAAAATA 59.369 45.455 0.00 0.00 0.00 1.40
22 23 2.964209 TGGGTCTGTTGGGCAAAATAA 58.036 42.857 0.00 0.00 0.00 1.40
23 24 2.896685 TGGGTCTGTTGGGCAAAATAAG 59.103 45.455 0.00 0.00 0.00 1.73
24 25 2.233676 GGGTCTGTTGGGCAAAATAAGG 59.766 50.000 0.00 0.00 0.00 2.69
25 26 2.353704 GGTCTGTTGGGCAAAATAAGGC 60.354 50.000 0.00 0.00 0.00 4.35
35 36 3.673902 GCAAAATAAGGCCATGTTTGGT 58.326 40.909 5.01 0.00 45.57 3.67
36 37 4.071423 GCAAAATAAGGCCATGTTTGGTT 58.929 39.130 5.01 0.00 45.57 3.67
37 38 4.154015 GCAAAATAAGGCCATGTTTGGTTC 59.846 41.667 5.01 0.00 45.57 3.62
38 39 5.303971 CAAAATAAGGCCATGTTTGGTTCA 58.696 37.500 5.01 0.00 45.57 3.18
39 40 5.760484 AAATAAGGCCATGTTTGGTTCAT 57.240 34.783 5.01 0.00 45.57 2.57
40 41 6.865834 AAATAAGGCCATGTTTGGTTCATA 57.134 33.333 5.01 0.00 45.57 2.15
41 42 6.865834 AATAAGGCCATGTTTGGTTCATAA 57.134 33.333 5.01 0.00 45.57 1.90
42 43 4.806640 AAGGCCATGTTTGGTTCATAAG 57.193 40.909 5.01 0.00 45.57 1.73
43 44 3.778265 AGGCCATGTTTGGTTCATAAGT 58.222 40.909 5.01 0.00 45.57 2.24
44 45 3.763897 AGGCCATGTTTGGTTCATAAGTC 59.236 43.478 5.01 0.00 45.57 3.01
45 46 3.119137 GGCCATGTTTGGTTCATAAGTCC 60.119 47.826 0.00 0.00 45.57 3.85
46 47 3.763897 GCCATGTTTGGTTCATAAGTCCT 59.236 43.478 0.00 0.00 45.57 3.85
47 48 4.947388 GCCATGTTTGGTTCATAAGTCCTA 59.053 41.667 0.00 0.00 45.57 2.94
48 49 5.417580 GCCATGTTTGGTTCATAAGTCCTAA 59.582 40.000 0.00 0.00 45.57 2.69
49 50 6.404734 GCCATGTTTGGTTCATAAGTCCTAAG 60.405 42.308 0.00 0.00 45.57 2.18
50 51 6.884295 CCATGTTTGGTTCATAAGTCCTAAGA 59.116 38.462 0.00 0.00 38.30 2.10
51 52 7.148239 CCATGTTTGGTTCATAAGTCCTAAGAC 60.148 40.741 0.00 0.00 39.64 3.01
81 82 9.720769 TTTTAGTCCCAACTTATAAGTCTCAAG 57.279 33.333 18.28 6.66 38.57 3.02
82 83 6.936968 AGTCCCAACTTATAAGTCTCAAGT 57.063 37.500 18.28 5.74 38.57 3.16
83 84 6.937392 AGTCCCAACTTATAAGTCTCAAGTC 58.063 40.000 18.28 6.78 38.57 3.01
84 85 6.070710 AGTCCCAACTTATAAGTCTCAAGTCC 60.071 42.308 18.28 3.21 38.57 3.85
85 86 5.189145 TCCCAACTTATAAGTCTCAAGTCCC 59.811 44.000 18.28 0.00 38.57 4.46
86 87 5.189934 CCCAACTTATAAGTCTCAAGTCCCT 59.810 44.000 18.28 0.00 38.57 4.20
87 88 6.383147 CCCAACTTATAAGTCTCAAGTCCCTA 59.617 42.308 18.28 0.00 38.57 3.53
88 89 7.093024 CCCAACTTATAAGTCTCAAGTCCCTAA 60.093 40.741 18.28 0.00 38.57 2.69
89 90 8.319146 CCAACTTATAAGTCTCAAGTCCCTAAA 58.681 37.037 18.28 0.00 38.57 1.85
90 91 9.720769 CAACTTATAAGTCTCAAGTCCCTAAAA 57.279 33.333 18.28 0.00 38.57 1.52
92 93 9.945904 ACTTATAAGTCTCAAGTCCCTAAAAAG 57.054 33.333 12.50 0.00 32.86 2.27
93 94 9.945904 CTTATAAGTCTCAAGTCCCTAAAAAGT 57.054 33.333 4.18 0.00 0.00 2.66
94 95 9.939802 TTATAAGTCTCAAGTCCCTAAAAAGTC 57.060 33.333 0.00 0.00 0.00 3.01
95 96 5.230323 AGTCTCAAGTCCCTAAAAAGTCC 57.770 43.478 0.00 0.00 0.00 3.85
96 97 4.041815 AGTCTCAAGTCCCTAAAAAGTCCC 59.958 45.833 0.00 0.00 0.00 4.46
97 98 4.041815 GTCTCAAGTCCCTAAAAAGTCCCT 59.958 45.833 0.00 0.00 0.00 4.20
98 99 5.247792 GTCTCAAGTCCCTAAAAAGTCCCTA 59.752 44.000 0.00 0.00 0.00 3.53
99 100 5.247792 TCTCAAGTCCCTAAAAAGTCCCTAC 59.752 44.000 0.00 0.00 0.00 3.18
100 101 4.287845 TCAAGTCCCTAAAAAGTCCCTACC 59.712 45.833 0.00 0.00 0.00 3.18
101 102 4.157668 AGTCCCTAAAAAGTCCCTACCT 57.842 45.455 0.00 0.00 0.00 3.08
102 103 3.844804 AGTCCCTAAAAAGTCCCTACCTG 59.155 47.826 0.00 0.00 0.00 4.00
103 104 3.586174 GTCCCTAAAAAGTCCCTACCTGT 59.414 47.826 0.00 0.00 0.00 4.00
104 105 4.042560 GTCCCTAAAAAGTCCCTACCTGTT 59.957 45.833 0.00 0.00 0.00 3.16
105 106 4.666431 TCCCTAAAAAGTCCCTACCTGTTT 59.334 41.667 0.00 0.00 0.00 2.83
106 107 4.765339 CCCTAAAAAGTCCCTACCTGTTTG 59.235 45.833 0.00 0.00 0.00 2.93
107 108 4.765339 CCTAAAAAGTCCCTACCTGTTTGG 59.235 45.833 0.00 0.00 42.93 3.28
118 119 2.364972 CCTGTTTGGTTTCTGGGACT 57.635 50.000 0.00 0.00 0.00 3.85
119 120 2.666317 CCTGTTTGGTTTCTGGGACTT 58.334 47.619 0.00 0.00 0.00 3.01
120 121 3.827722 CCTGTTTGGTTTCTGGGACTTA 58.172 45.455 0.00 0.00 0.00 2.24
121 122 4.407365 CCTGTTTGGTTTCTGGGACTTAT 58.593 43.478 0.00 0.00 0.00 1.73
122 123 5.566469 CCTGTTTGGTTTCTGGGACTTATA 58.434 41.667 0.00 0.00 0.00 0.98
123 124 6.007703 CCTGTTTGGTTTCTGGGACTTATAA 58.992 40.000 0.00 0.00 0.00 0.98
124 125 6.151144 CCTGTTTGGTTTCTGGGACTTATAAG 59.849 42.308 11.05 11.05 0.00 1.73
125 126 6.607019 TGTTTGGTTTCTGGGACTTATAAGT 58.393 36.000 18.05 18.05 43.16 2.24
169 170 9.102453 ACAACTATAAATCCCTATAAGTCCCTC 57.898 37.037 0.00 0.00 0.00 4.30
170 171 8.541234 CAACTATAAATCCCTATAAGTCCCTCC 58.459 40.741 0.00 0.00 0.00 4.30
171 172 8.025299 ACTATAAATCCCTATAAGTCCCTCCT 57.975 38.462 0.00 0.00 0.00 3.69
172 173 8.474268 ACTATAAATCCCTATAAGTCCCTCCTT 58.526 37.037 0.00 0.00 0.00 3.36
175 176 7.634526 AAATCCCTATAAGTCCCTCCTTAAG 57.365 40.000 0.00 0.00 31.09 1.85
176 177 6.562845 ATCCCTATAAGTCCCTCCTTAAGA 57.437 41.667 3.36 0.00 31.09 2.10
177 178 5.966684 TCCCTATAAGTCCCTCCTTAAGAG 58.033 45.833 3.36 0.00 42.83 2.85
178 179 5.439059 TCCCTATAAGTCCCTCCTTAAGAGT 59.561 44.000 3.36 0.00 41.47 3.24
179 180 5.776208 CCCTATAAGTCCCTCCTTAAGAGTC 59.224 48.000 3.36 0.00 41.47 3.36
180 181 6.412259 CCCTATAAGTCCCTCCTTAAGAGTCT 60.412 46.154 3.36 0.00 41.47 3.24
181 182 7.070629 CCTATAAGTCCCTCCTTAAGAGTCTT 58.929 42.308 10.87 10.87 41.47 3.01
182 183 8.226112 CCTATAAGTCCCTCCTTAAGAGTCTTA 58.774 40.741 8.59 8.59 41.47 2.10
183 184 9.816787 CTATAAGTCCCTCCTTAAGAGTCTTAT 57.183 37.037 13.34 10.38 41.47 1.73
185 186 7.816300 AAGTCCCTCCTTAAGAGTCTTATTT 57.184 36.000 13.34 0.00 41.47 1.40
186 187 7.426606 AGTCCCTCCTTAAGAGTCTTATTTC 57.573 40.000 13.34 0.47 41.47 2.17
187 188 6.960542 AGTCCCTCCTTAAGAGTCTTATTTCA 59.039 38.462 13.34 0.00 41.47 2.69
188 189 7.625682 AGTCCCTCCTTAAGAGTCTTATTTCAT 59.374 37.037 13.34 0.00 41.47 2.57
189 190 8.925338 GTCCCTCCTTAAGAGTCTTATTTCATA 58.075 37.037 13.34 0.00 41.47 2.15
190 191 9.502035 TCCCTCCTTAAGAGTCTTATTTCATAA 57.498 33.333 13.34 0.00 41.47 1.90
191 192 9.771534 CCCTCCTTAAGAGTCTTATTTCATAAG 57.228 37.037 13.34 7.71 41.47 1.73
195 196 9.549078 CCTTAAGAGTCTTATTTCATAAGTCCC 57.451 37.037 13.34 0.00 42.21 4.46
199 200 9.981460 AAGAGTCTTATTTCATAAGTCCCAAAT 57.019 29.630 2.75 0.00 42.21 2.32
200 201 9.401058 AGAGTCTTATTTCATAAGTCCCAAATG 57.599 33.333 3.93 0.00 42.21 2.32
201 202 8.000780 AGTCTTATTTCATAAGTCCCAAATGC 57.999 34.615 3.93 0.00 42.21 3.56
202 203 7.068716 AGTCTTATTTCATAAGTCCCAAATGCC 59.931 37.037 3.93 0.00 42.21 4.40
203 204 6.323739 TCTTATTTCATAAGTCCCAAATGCCC 59.676 38.462 3.93 0.00 42.21 5.36
204 205 3.464720 TTCATAAGTCCCAAATGCCCA 57.535 42.857 0.00 0.00 0.00 5.36
205 206 2.733956 TCATAAGTCCCAAATGCCCAC 58.266 47.619 0.00 0.00 0.00 4.61
206 207 2.311542 TCATAAGTCCCAAATGCCCACT 59.688 45.455 0.00 0.00 0.00 4.00
207 208 2.990740 TAAGTCCCAAATGCCCACTT 57.009 45.000 0.00 0.00 0.00 3.16
208 209 2.101640 AAGTCCCAAATGCCCACTTT 57.898 45.000 0.00 0.00 0.00 2.66
209 210 2.990740 AGTCCCAAATGCCCACTTTA 57.009 45.000 0.00 0.00 0.00 1.85
210 211 3.252554 AGTCCCAAATGCCCACTTTAA 57.747 42.857 0.00 0.00 0.00 1.52
211 212 3.165071 AGTCCCAAATGCCCACTTTAAG 58.835 45.455 0.00 0.00 0.00 1.85
212 213 2.897326 GTCCCAAATGCCCACTTTAAGT 59.103 45.455 0.00 0.00 0.00 2.24
213 214 3.056821 GTCCCAAATGCCCACTTTAAGTC 60.057 47.826 0.00 0.00 0.00 3.01
214 215 2.233676 CCCAAATGCCCACTTTAAGTCC 59.766 50.000 0.00 0.00 0.00 3.85
215 216 2.233676 CCAAATGCCCACTTTAAGTCCC 59.766 50.000 0.00 0.00 0.00 4.46
216 217 3.165071 CAAATGCCCACTTTAAGTCCCT 58.835 45.455 0.00 0.00 0.00 4.20
217 218 4.340617 CAAATGCCCACTTTAAGTCCCTA 58.659 43.478 0.00 0.00 0.00 3.53
218 219 4.881157 AATGCCCACTTTAAGTCCCTAT 57.119 40.909 0.00 0.00 0.00 2.57
219 220 5.987019 AATGCCCACTTTAAGTCCCTATA 57.013 39.130 0.00 0.00 0.00 1.31
220 221 5.987019 ATGCCCACTTTAAGTCCCTATAA 57.013 39.130 0.00 0.00 0.00 0.98
221 222 5.367945 TGCCCACTTTAAGTCCCTATAAG 57.632 43.478 0.00 0.00 0.00 1.73
222 223 4.786454 TGCCCACTTTAAGTCCCTATAAGT 59.214 41.667 0.00 0.00 0.00 2.24
223 224 5.104652 TGCCCACTTTAAGTCCCTATAAGTC 60.105 44.000 0.00 0.00 0.00 3.01
224 225 5.686913 GCCCACTTTAAGTCCCTATAAGTCC 60.687 48.000 0.00 0.00 0.00 3.85
225 226 5.163227 CCCACTTTAAGTCCCTATAAGTCCC 60.163 48.000 0.00 0.00 0.00 4.46
226 227 5.666265 CCACTTTAAGTCCCTATAAGTCCCT 59.334 44.000 0.00 0.00 0.00 4.20
227 228 6.183360 CCACTTTAAGTCCCTATAAGTCCCTC 60.183 46.154 0.00 0.00 0.00 4.30
228 229 6.612049 CACTTTAAGTCCCTATAAGTCCCTCT 59.388 42.308 0.00 0.00 0.00 3.69
229 230 7.125963 CACTTTAAGTCCCTATAAGTCCCTCTT 59.874 40.741 0.00 0.00 39.89 2.85
230 231 7.125963 ACTTTAAGTCCCTATAAGTCCCTCTTG 59.874 40.741 0.00 0.00 37.56 3.02
231 232 4.628661 AGTCCCTATAAGTCCCTCTTGT 57.371 45.455 0.00 0.00 37.56 3.16
232 233 4.961585 AGTCCCTATAAGTCCCTCTTGTT 58.038 43.478 0.00 0.00 37.56 2.83
233 234 5.351405 AGTCCCTATAAGTCCCTCTTGTTT 58.649 41.667 0.00 0.00 37.56 2.83
234 235 5.189934 AGTCCCTATAAGTCCCTCTTGTTTG 59.810 44.000 0.00 0.00 37.56 2.93
235 236 4.473559 TCCCTATAAGTCCCTCTTGTTTGG 59.526 45.833 0.00 0.00 37.56 3.28
236 237 4.227527 CCCTATAAGTCCCTCTTGTTTGGT 59.772 45.833 0.00 0.00 37.56 3.67
237 238 5.281037 CCCTATAAGTCCCTCTTGTTTGGTT 60.281 44.000 0.00 0.00 37.56 3.67
238 239 6.246163 CCTATAAGTCCCTCTTGTTTGGTTT 58.754 40.000 0.00 0.00 37.56 3.27
239 240 7.399634 CCTATAAGTCCCTCTTGTTTGGTTTA 58.600 38.462 0.00 0.00 37.56 2.01
240 241 7.553044 CCTATAAGTCCCTCTTGTTTGGTTTAG 59.447 40.741 0.00 0.00 37.56 1.85
241 242 5.382664 AAGTCCCTCTTGTTTGGTTTAGA 57.617 39.130 0.00 0.00 34.77 2.10
242 243 5.584551 AGTCCCTCTTGTTTGGTTTAGAT 57.415 39.130 0.00 0.00 0.00 1.98
243 244 5.316987 AGTCCCTCTTGTTTGGTTTAGATG 58.683 41.667 0.00 0.00 0.00 2.90
244 245 4.459337 GTCCCTCTTGTTTGGTTTAGATGG 59.541 45.833 0.00 0.00 0.00 3.51
245 246 3.763897 CCCTCTTGTTTGGTTTAGATGGG 59.236 47.826 0.00 0.00 0.00 4.00
246 247 4.508405 CCCTCTTGTTTGGTTTAGATGGGA 60.508 45.833 0.00 0.00 31.89 4.37
247 248 4.459337 CCTCTTGTTTGGTTTAGATGGGAC 59.541 45.833 0.00 0.00 0.00 4.46
248 249 5.316987 CTCTTGTTTGGTTTAGATGGGACT 58.683 41.667 0.00 0.00 0.00 3.85
249 250 5.701224 TCTTGTTTGGTTTAGATGGGACTT 58.299 37.500 0.00 0.00 0.00 3.01
250 251 6.843752 TCTTGTTTGGTTTAGATGGGACTTA 58.156 36.000 0.00 0.00 0.00 2.24
251 252 7.466804 TCTTGTTTGGTTTAGATGGGACTTAT 58.533 34.615 0.00 0.00 0.00 1.73
252 253 8.607713 TCTTGTTTGGTTTAGATGGGACTTATA 58.392 33.333 0.00 0.00 0.00 0.98
253 254 8.801882 TTGTTTGGTTTAGATGGGACTTATAG 57.198 34.615 0.00 0.00 0.00 1.31
254 255 7.343357 TGTTTGGTTTAGATGGGACTTATAGG 58.657 38.462 0.00 0.00 0.00 2.57
255 256 6.509523 TTGGTTTAGATGGGACTTATAGGG 57.490 41.667 0.00 0.00 0.00 3.53
256 257 5.795079 TGGTTTAGATGGGACTTATAGGGA 58.205 41.667 0.00 0.00 0.00 4.20
257 258 5.605488 TGGTTTAGATGGGACTTATAGGGAC 59.395 44.000 0.00 0.00 0.00 4.46
258 259 5.845065 GGTTTAGATGGGACTTATAGGGACT 59.155 44.000 0.00 0.00 46.37 3.85
259 260 6.329460 GGTTTAGATGGGACTTATAGGGACTT 59.671 42.308 0.00 0.00 41.75 3.01
260 261 7.147355 GGTTTAGATGGGACTTATAGGGACTTT 60.147 40.741 0.00 0.00 41.75 2.66
261 262 8.272889 GTTTAGATGGGACTTATAGGGACTTTT 58.727 37.037 0.00 0.00 41.75 2.27
262 263 6.910259 AGATGGGACTTATAGGGACTTTTT 57.090 37.500 0.00 0.00 41.75 1.94
289 290 8.561738 AAGTACATAAACCAATAAGTCACTGG 57.438 34.615 0.00 0.00 36.24 4.00
290 291 7.913789 AGTACATAAACCAATAAGTCACTGGA 58.086 34.615 0.00 0.00 34.16 3.86
291 292 8.380099 AGTACATAAACCAATAAGTCACTGGAA 58.620 33.333 0.00 0.00 34.16 3.53
292 293 9.005777 GTACATAAACCAATAAGTCACTGGAAA 57.994 33.333 0.00 0.00 34.16 3.13
293 294 7.882179 ACATAAACCAATAAGTCACTGGAAAC 58.118 34.615 0.00 0.00 34.16 2.78
294 295 7.504238 ACATAAACCAATAAGTCACTGGAAACA 59.496 33.333 0.00 0.00 39.59 2.83
295 296 6.783708 AAACCAATAAGTCACTGGAAACAA 57.216 33.333 0.00 0.00 42.06 2.83
296 297 6.783708 AACCAATAAGTCACTGGAAACAAA 57.216 33.333 0.00 0.00 42.06 2.83
297 298 6.144078 ACCAATAAGTCACTGGAAACAAAC 57.856 37.500 0.00 0.00 42.06 2.93
298 299 5.654650 ACCAATAAGTCACTGGAAACAAACA 59.345 36.000 0.00 0.00 42.06 2.83
299 300 5.977129 CCAATAAGTCACTGGAAACAAACAC 59.023 40.000 0.00 0.00 42.06 3.32
300 301 5.767816 ATAAGTCACTGGAAACAAACACC 57.232 39.130 0.00 0.00 42.06 4.16
301 302 2.375146 AGTCACTGGAAACAAACACCC 58.625 47.619 0.00 0.00 42.06 4.61
302 303 2.025321 AGTCACTGGAAACAAACACCCT 60.025 45.455 0.00 0.00 42.06 4.34
303 304 2.357952 GTCACTGGAAACAAACACCCTC 59.642 50.000 0.00 0.00 42.06 4.30
304 305 2.241176 TCACTGGAAACAAACACCCTCT 59.759 45.455 0.00 0.00 42.06 3.69
305 306 3.456644 TCACTGGAAACAAACACCCTCTA 59.543 43.478 0.00 0.00 42.06 2.43
306 307 4.080243 TCACTGGAAACAAACACCCTCTAA 60.080 41.667 0.00 0.00 42.06 2.10
307 308 4.275936 CACTGGAAACAAACACCCTCTAAG 59.724 45.833 0.00 0.00 42.06 2.18
308 309 4.079958 ACTGGAAACAAACACCCTCTAAGT 60.080 41.667 0.00 0.00 42.06 2.24
309 310 4.457466 TGGAAACAAACACCCTCTAAGTC 58.543 43.478 0.00 0.00 37.44 3.01
310 311 4.080243 TGGAAACAAACACCCTCTAAGTCA 60.080 41.667 0.00 0.00 37.44 3.41
311 312 4.275196 GGAAACAAACACCCTCTAAGTCAC 59.725 45.833 0.00 0.00 0.00 3.67
312 313 4.772886 AACAAACACCCTCTAAGTCACT 57.227 40.909 0.00 0.00 0.00 3.41
313 314 4.772886 ACAAACACCCTCTAAGTCACTT 57.227 40.909 0.00 0.00 0.00 3.16
314 315 5.112129 ACAAACACCCTCTAAGTCACTTT 57.888 39.130 0.00 0.00 0.00 2.66
315 316 5.506708 ACAAACACCCTCTAAGTCACTTTT 58.493 37.500 0.00 0.00 0.00 2.27
316 317 5.949952 ACAAACACCCTCTAAGTCACTTTTT 59.050 36.000 0.00 0.00 0.00 1.94
344 345 8.617290 ATTTTTCGACTTATAAGTTGGTGACT 57.383 30.769 25.99 10.93 39.88 3.41
355 356 5.784578 AAGTTGGTGACTTATTTGGAACC 57.215 39.130 0.00 0.00 46.61 3.62
356 357 4.798882 AGTTGGTGACTTATTTGGAACCA 58.201 39.130 0.00 0.00 33.92 3.67
357 358 5.205056 AGTTGGTGACTTATTTGGAACCAA 58.795 37.500 1.83 1.83 43.50 3.67
358 359 5.659079 AGTTGGTGACTTATTTGGAACCAAA 59.341 36.000 19.15 19.15 46.21 3.28
359 360 5.523438 TGGTGACTTATTTGGAACCAAAC 57.477 39.130 19.23 8.57 46.80 2.93
360 361 4.956700 TGGTGACTTATTTGGAACCAAACA 59.043 37.500 19.23 7.15 46.80 2.83
361 362 5.068460 TGGTGACTTATTTGGAACCAAACAG 59.932 40.000 19.23 18.64 46.80 3.16
362 363 5.508994 GGTGACTTATTTGGAACCAAACAGG 60.509 44.000 19.23 12.17 46.80 4.00
363 364 4.038642 TGACTTATTTGGAACCAAACAGGC 59.961 41.667 19.23 18.98 46.80 4.85
364 365 3.323691 ACTTATTTGGAACCAAACAGGCC 59.676 43.478 19.23 0.00 46.80 5.19
365 366 1.055849 ATTTGGAACCAAACAGGCCC 58.944 50.000 19.23 0.00 46.80 5.80
366 367 0.031616 TTTGGAACCAAACAGGCCCT 60.032 50.000 14.02 0.00 43.14 5.19
367 368 0.031616 TTGGAACCAAACAGGCCCTT 60.032 50.000 0.00 0.00 43.14 3.95
368 369 0.854218 TGGAACCAAACAGGCCCTTA 59.146 50.000 0.00 0.00 43.14 2.69
369 370 1.218196 TGGAACCAAACAGGCCCTTAA 59.782 47.619 0.00 0.00 43.14 1.85
370 371 1.616865 GGAACCAAACAGGCCCTTAAC 59.383 52.381 0.00 0.00 43.14 2.01
371 372 2.312390 GAACCAAACAGGCCCTTAACA 58.688 47.619 0.00 0.00 43.14 2.41
372 373 1.995376 ACCAAACAGGCCCTTAACAG 58.005 50.000 0.00 0.00 43.14 3.16
373 374 1.497286 ACCAAACAGGCCCTTAACAGA 59.503 47.619 0.00 0.00 43.14 3.41
374 375 2.110011 ACCAAACAGGCCCTTAACAGAT 59.890 45.455 0.00 0.00 43.14 2.90
375 376 2.755103 CCAAACAGGCCCTTAACAGATC 59.245 50.000 0.00 0.00 0.00 2.75
376 377 2.755103 CAAACAGGCCCTTAACAGATCC 59.245 50.000 0.00 0.00 0.00 3.36
377 378 1.668826 ACAGGCCCTTAACAGATCCA 58.331 50.000 0.00 0.00 0.00 3.41
378 379 1.282157 ACAGGCCCTTAACAGATCCAC 59.718 52.381 0.00 0.00 0.00 4.02
379 380 1.561542 CAGGCCCTTAACAGATCCACT 59.438 52.381 0.00 0.00 0.00 4.00
380 381 1.840635 AGGCCCTTAACAGATCCACTC 59.159 52.381 0.00 0.00 0.00 3.51
381 382 1.840635 GGCCCTTAACAGATCCACTCT 59.159 52.381 0.00 0.00 33.14 3.24
382 383 2.239907 GGCCCTTAACAGATCCACTCTT 59.760 50.000 0.00 0.00 29.16 2.85
383 384 3.308473 GGCCCTTAACAGATCCACTCTTT 60.308 47.826 0.00 0.00 29.16 2.52
384 385 3.942115 GCCCTTAACAGATCCACTCTTTC 59.058 47.826 0.00 0.00 29.16 2.62
385 386 4.518249 CCCTTAACAGATCCACTCTTTCC 58.482 47.826 0.00 0.00 29.16 3.13
386 387 4.226168 CCCTTAACAGATCCACTCTTTCCT 59.774 45.833 0.00 0.00 29.16 3.36
387 388 5.280727 CCCTTAACAGATCCACTCTTTCCTT 60.281 44.000 0.00 0.00 29.16 3.36
388 389 5.645497 CCTTAACAGATCCACTCTTTCCTTG 59.355 44.000 0.00 0.00 29.16 3.61
389 390 3.710209 ACAGATCCACTCTTTCCTTGG 57.290 47.619 0.00 0.00 29.16 3.61
390 391 2.982488 ACAGATCCACTCTTTCCTTGGT 59.018 45.455 0.00 0.00 29.16 3.67
391 392 4.168101 ACAGATCCACTCTTTCCTTGGTA 58.832 43.478 0.00 0.00 29.16 3.25
392 393 4.785376 ACAGATCCACTCTTTCCTTGGTAT 59.215 41.667 0.00 0.00 29.16 2.73
393 394 5.121811 CAGATCCACTCTTTCCTTGGTATG 58.878 45.833 0.00 0.00 29.16 2.39
394 395 3.350219 TCCACTCTTTCCTTGGTATGC 57.650 47.619 0.00 0.00 0.00 3.14
395 396 2.009774 CCACTCTTTCCTTGGTATGCG 58.990 52.381 0.00 0.00 0.00 4.73
396 397 2.615493 CCACTCTTTCCTTGGTATGCGT 60.615 50.000 0.00 0.00 0.00 5.24
397 398 2.416547 CACTCTTTCCTTGGTATGCGTG 59.583 50.000 0.00 0.00 0.00 5.34
398 399 2.038557 ACTCTTTCCTTGGTATGCGTGT 59.961 45.455 0.00 0.00 0.00 4.49
399 400 2.416547 CTCTTTCCTTGGTATGCGTGTG 59.583 50.000 0.00 0.00 0.00 3.82
400 401 2.037902 TCTTTCCTTGGTATGCGTGTGA 59.962 45.455 0.00 0.00 0.00 3.58
401 402 2.093306 TTCCTTGGTATGCGTGTGAG 57.907 50.000 0.00 0.00 0.00 3.51
402 403 1.262417 TCCTTGGTATGCGTGTGAGA 58.738 50.000 0.00 0.00 0.00 3.27
403 404 1.621317 TCCTTGGTATGCGTGTGAGAA 59.379 47.619 0.00 0.00 0.00 2.87
404 405 2.002586 CCTTGGTATGCGTGTGAGAAG 58.997 52.381 0.00 0.00 0.00 2.85
405 406 2.612972 CCTTGGTATGCGTGTGAGAAGT 60.613 50.000 0.00 0.00 0.00 3.01
406 407 2.831685 TGGTATGCGTGTGAGAAGTT 57.168 45.000 0.00 0.00 0.00 2.66
407 408 3.945981 TGGTATGCGTGTGAGAAGTTA 57.054 42.857 0.00 0.00 0.00 2.24
408 409 4.465632 TGGTATGCGTGTGAGAAGTTAT 57.534 40.909 0.00 0.00 0.00 1.89
409 410 4.180817 TGGTATGCGTGTGAGAAGTTATG 58.819 43.478 0.00 0.00 0.00 1.90
410 411 3.001330 GGTATGCGTGTGAGAAGTTATGC 59.999 47.826 0.00 0.00 0.00 3.14
411 412 2.162319 TGCGTGTGAGAAGTTATGCA 57.838 45.000 0.00 0.00 33.09 3.96
412 413 1.798223 TGCGTGTGAGAAGTTATGCAC 59.202 47.619 0.00 0.00 30.76 4.57
413 414 2.069273 GCGTGTGAGAAGTTATGCACT 58.931 47.619 0.00 0.00 37.30 4.40
414 415 2.159787 GCGTGTGAGAAGTTATGCACTG 60.160 50.000 0.00 0.00 35.12 3.66
415 416 3.317150 CGTGTGAGAAGTTATGCACTGA 58.683 45.455 0.00 0.00 35.12 3.41
416 417 3.366121 CGTGTGAGAAGTTATGCACTGAG 59.634 47.826 0.00 0.00 35.12 3.35
417 418 4.310769 GTGTGAGAAGTTATGCACTGAGT 58.689 43.478 0.00 0.00 35.12 3.41
418 419 5.470368 GTGTGAGAAGTTATGCACTGAGTA 58.530 41.667 0.00 0.00 35.12 2.59
419 420 5.926542 GTGTGAGAAGTTATGCACTGAGTAA 59.073 40.000 0.00 0.00 35.12 2.24
420 421 6.423905 GTGTGAGAAGTTATGCACTGAGTAAA 59.576 38.462 0.00 0.00 35.12 2.01
421 422 6.989759 TGTGAGAAGTTATGCACTGAGTAAAA 59.010 34.615 0.00 0.00 35.12 1.52
422 423 7.497579 TGTGAGAAGTTATGCACTGAGTAAAAA 59.502 33.333 0.00 0.00 35.12 1.94
446 447 4.181309 CTTCGGAGGAAGTATATGAGGC 57.819 50.000 0.00 0.00 43.80 4.70
447 448 2.526432 TCGGAGGAAGTATATGAGGCC 58.474 52.381 0.00 0.00 0.00 5.19
448 449 2.158370 TCGGAGGAAGTATATGAGGCCA 60.158 50.000 5.01 0.00 0.00 5.36
449 450 2.632996 CGGAGGAAGTATATGAGGCCAA 59.367 50.000 5.01 0.00 0.00 4.52
450 451 3.071023 CGGAGGAAGTATATGAGGCCAAA 59.929 47.826 5.01 0.00 0.00 3.28
451 452 4.263068 CGGAGGAAGTATATGAGGCCAAAT 60.263 45.833 5.01 0.00 0.00 2.32
452 453 5.635120 GGAGGAAGTATATGAGGCCAAATT 58.365 41.667 5.01 0.00 0.00 1.82
453 454 6.071320 GGAGGAAGTATATGAGGCCAAATTT 58.929 40.000 5.01 0.00 0.00 1.82
454 455 6.015940 GGAGGAAGTATATGAGGCCAAATTTG 60.016 42.308 11.40 11.40 0.00 2.32
455 456 6.672593 AGGAAGTATATGAGGCCAAATTTGA 58.327 36.000 19.86 0.00 0.00 2.69
456 457 6.547510 AGGAAGTATATGAGGCCAAATTTGAC 59.452 38.462 19.86 7.94 0.00 3.18
457 458 6.321181 GGAAGTATATGAGGCCAAATTTGACA 59.679 38.462 19.86 13.15 0.00 3.58
458 459 7.147915 GGAAGTATATGAGGCCAAATTTGACAA 60.148 37.037 19.86 5.46 0.00 3.18
459 460 7.100458 AGTATATGAGGCCAAATTTGACAAC 57.900 36.000 19.86 6.49 0.00 3.32
460 461 6.891908 AGTATATGAGGCCAAATTTGACAACT 59.108 34.615 19.86 10.94 0.00 3.16
461 462 8.052748 AGTATATGAGGCCAAATTTGACAACTA 58.947 33.333 19.86 4.63 0.00 2.24
462 463 7.902920 ATATGAGGCCAAATTTGACAACTAT 57.097 32.000 19.86 8.84 0.00 2.12
463 464 5.389859 TGAGGCCAAATTTGACAACTATG 57.610 39.130 19.86 1.30 0.00 2.23
464 465 5.076182 TGAGGCCAAATTTGACAACTATGA 58.924 37.500 19.86 0.00 0.00 2.15
465 466 5.716228 TGAGGCCAAATTTGACAACTATGAT 59.284 36.000 19.86 0.00 0.00 2.45
466 467 5.969423 AGGCCAAATTTGACAACTATGATG 58.031 37.500 19.86 0.00 0.00 3.07
467 468 5.716228 AGGCCAAATTTGACAACTATGATGA 59.284 36.000 19.86 0.00 0.00 2.92
468 469 6.381994 AGGCCAAATTTGACAACTATGATGAT 59.618 34.615 19.86 0.00 0.00 2.45
469 470 7.560991 AGGCCAAATTTGACAACTATGATGATA 59.439 33.333 19.86 0.00 0.00 2.15
470 471 7.864379 GGCCAAATTTGACAACTATGATGATAG 59.136 37.037 19.86 0.00 38.06 2.08
471 472 8.623903 GCCAAATTTGACAACTATGATGATAGA 58.376 33.333 19.86 0.00 35.90 1.98
475 476 9.570468 AATTTGACAACTATGATGATAGATGCT 57.430 29.630 6.17 0.00 38.11 3.79
476 477 8.599055 TTTGACAACTATGATGATAGATGCTC 57.401 34.615 6.17 5.86 38.11 4.26
477 478 6.695429 TGACAACTATGATGATAGATGCTCC 58.305 40.000 6.17 0.00 38.11 4.70
478 479 6.047511 ACAACTATGATGATAGATGCTCCC 57.952 41.667 6.17 0.00 38.11 4.30
479 480 5.545335 ACAACTATGATGATAGATGCTCCCA 59.455 40.000 6.17 0.00 38.11 4.37
480 481 5.936187 ACTATGATGATAGATGCTCCCAG 57.064 43.478 6.17 0.00 35.90 4.45
481 482 4.715792 ACTATGATGATAGATGCTCCCAGG 59.284 45.833 6.17 0.00 35.90 4.45
482 483 1.627329 TGATGATAGATGCTCCCAGGC 59.373 52.381 0.00 0.00 0.00 4.85
483 484 0.990374 ATGATAGATGCTCCCAGGCC 59.010 55.000 0.00 0.00 0.00 5.19
484 485 0.104777 TGATAGATGCTCCCAGGCCT 60.105 55.000 0.00 0.00 0.00 5.19
485 486 1.149923 TGATAGATGCTCCCAGGCCTA 59.850 52.381 3.98 0.00 0.00 3.93
486 487 2.225727 TGATAGATGCTCCCAGGCCTAT 60.226 50.000 3.98 0.00 0.00 2.57
487 488 3.012844 TGATAGATGCTCCCAGGCCTATA 59.987 47.826 3.98 0.00 0.00 1.31
488 489 2.657355 AGATGCTCCCAGGCCTATAT 57.343 50.000 3.98 0.00 0.00 0.86
489 490 3.784311 AGATGCTCCCAGGCCTATATA 57.216 47.619 3.98 0.00 0.00 0.86
490 491 4.292867 AGATGCTCCCAGGCCTATATAT 57.707 45.455 3.98 0.00 0.00 0.86
491 492 4.639731 AGATGCTCCCAGGCCTATATATT 58.360 43.478 3.98 0.00 0.00 1.28
492 493 5.042387 AGATGCTCCCAGGCCTATATATTT 58.958 41.667 3.98 0.00 0.00 1.40
493 494 4.574674 TGCTCCCAGGCCTATATATTTG 57.425 45.455 3.98 0.00 0.00 2.32
494 495 3.266772 TGCTCCCAGGCCTATATATTTGG 59.733 47.826 3.98 0.00 0.00 3.28
495 496 3.523564 GCTCCCAGGCCTATATATTTGGA 59.476 47.826 3.98 0.63 0.00 3.53
496 497 4.166919 GCTCCCAGGCCTATATATTTGGAT 59.833 45.833 3.98 0.00 0.00 3.41
497 498 5.688807 CTCCCAGGCCTATATATTTGGATG 58.311 45.833 3.98 0.00 0.00 3.51
498 499 5.358306 TCCCAGGCCTATATATTTGGATGA 58.642 41.667 3.98 0.00 0.00 2.92
499 500 5.795343 TCCCAGGCCTATATATTTGGATGAA 59.205 40.000 3.98 0.00 0.00 2.57
500 501 6.276806 TCCCAGGCCTATATATTTGGATGAAA 59.723 38.462 3.98 0.00 0.00 2.69
501 502 6.953520 CCCAGGCCTATATATTTGGATGAAAA 59.046 38.462 3.98 0.00 0.00 2.29
502 503 7.123247 CCCAGGCCTATATATTTGGATGAAAAG 59.877 40.741 3.98 0.00 0.00 2.27
503 504 7.890127 CCAGGCCTATATATTTGGATGAAAAGA 59.110 37.037 3.98 0.00 0.00 2.52
504 505 9.300681 CAGGCCTATATATTTGGATGAAAAGAA 57.699 33.333 3.98 0.00 0.00 2.52
515 516 9.927668 ATTTGGATGAAAAGAATACACGAAAAT 57.072 25.926 0.00 0.00 0.00 1.82
516 517 8.741101 TTGGATGAAAAGAATACACGAAAATG 57.259 30.769 0.00 0.00 0.00 2.32
517 518 8.105097 TGGATGAAAAGAATACACGAAAATGA 57.895 30.769 0.00 0.00 0.00 2.57
518 519 8.236586 TGGATGAAAAGAATACACGAAAATGAG 58.763 33.333 0.00 0.00 0.00 2.90
519 520 8.237267 GGATGAAAAGAATACACGAAAATGAGT 58.763 33.333 0.00 0.00 0.00 3.41
520 521 9.612620 GATGAAAAGAATACACGAAAATGAGTT 57.387 29.630 0.00 0.00 0.00 3.01
531 532 7.855545 ACACGAAAATGAGTTATGATAGATGC 58.144 34.615 0.00 0.00 0.00 3.91
532 533 7.712639 ACACGAAAATGAGTTATGATAGATGCT 59.287 33.333 0.00 0.00 0.00 3.79
533 534 8.219769 CACGAAAATGAGTTATGATAGATGCTC 58.780 37.037 0.00 0.00 0.00 4.26
534 535 7.386299 ACGAAAATGAGTTATGATAGATGCTCC 59.614 37.037 0.00 0.00 0.00 4.70
535 536 7.148507 CGAAAATGAGTTATGATAGATGCTCCC 60.149 40.741 0.00 0.00 0.00 4.30
536 537 6.692849 AATGAGTTATGATAGATGCTCCCA 57.307 37.500 0.00 0.00 0.00 4.37
537 538 5.735285 TGAGTTATGATAGATGCTCCCAG 57.265 43.478 0.00 0.00 0.00 4.45
538 539 4.529769 TGAGTTATGATAGATGCTCCCAGG 59.470 45.833 0.00 0.00 0.00 4.45
539 540 3.262915 AGTTATGATAGATGCTCCCAGGC 59.737 47.826 0.00 0.00 0.00 4.85
540 541 0.612229 ATGATAGATGCTCCCAGGCG 59.388 55.000 0.00 0.00 34.52 5.52
541 542 1.375268 GATAGATGCTCCCAGGCGC 60.375 63.158 0.00 0.00 34.52 6.53
542 543 2.794820 GATAGATGCTCCCAGGCGCC 62.795 65.000 21.89 21.89 34.52 6.53
544 545 4.496336 GATGCTCCCAGGCGCCTT 62.496 66.667 30.60 11.07 34.52 4.35
545 546 4.809496 ATGCTCCCAGGCGCCTTG 62.809 66.667 30.60 24.97 34.52 3.61
548 549 4.351054 CTCCCAGGCGCCTTGGTT 62.351 66.667 37.71 13.07 31.49 3.67
549 550 4.659172 TCCCAGGCGCCTTGGTTG 62.659 66.667 37.71 23.48 31.49 3.77
555 556 4.279043 GCGCCTTGGTTGCCGTTT 62.279 61.111 0.00 0.00 0.00 3.60
556 557 2.050442 CGCCTTGGTTGCCGTTTC 60.050 61.111 0.00 0.00 0.00 2.78
557 558 2.338620 GCCTTGGTTGCCGTTTCC 59.661 61.111 0.00 0.00 0.00 3.13
558 559 3.047735 CCTTGGTTGCCGTTTCCC 58.952 61.111 0.00 0.00 0.00 3.97
559 560 2.642700 CTTGGTTGCCGTTTCCCG 59.357 61.111 0.00 0.00 0.00 5.14
560 561 1.894756 CTTGGTTGCCGTTTCCCGA 60.895 57.895 0.00 0.00 39.56 5.14
561 562 2.125202 CTTGGTTGCCGTTTCCCGAC 62.125 60.000 0.00 0.00 39.56 4.79
562 563 3.719144 GGTTGCCGTTTCCCGACG 61.719 66.667 0.00 0.00 42.43 5.12
563 564 2.662527 GTTGCCGTTTCCCGACGA 60.663 61.111 0.00 0.00 45.47 4.20
564 565 2.356553 TTGCCGTTTCCCGACGAG 60.357 61.111 0.00 0.00 45.47 4.18
565 566 3.869473 TTGCCGTTTCCCGACGAGG 62.869 63.158 0.00 0.00 45.47 4.63
566 567 4.368543 GCCGTTTCCCGACGAGGT 62.369 66.667 0.00 0.00 45.47 3.85
567 568 2.126189 CCGTTTCCCGACGAGGTC 60.126 66.667 0.00 0.00 45.47 3.85
576 577 4.403976 GACGAGGTCGGAGCATTC 57.596 61.111 10.15 0.00 44.95 2.67
577 578 1.586564 GACGAGGTCGGAGCATTCG 60.587 63.158 14.68 14.68 44.95 3.34
578 579 2.267681 GACGAGGTCGGAGCATTCGT 62.268 60.000 19.83 19.83 45.95 3.85
579 580 1.874019 CGAGGTCGGAGCATTCGTG 60.874 63.158 10.15 0.00 39.02 4.35
580 581 1.519455 GAGGTCGGAGCATTCGTGG 60.519 63.158 10.15 0.00 39.02 4.94
581 582 2.511600 GGTCGGAGCATTCGTGGG 60.512 66.667 1.64 0.00 39.02 4.61
582 583 3.195698 GTCGGAGCATTCGTGGGC 61.196 66.667 0.00 0.00 39.02 5.36
583 584 4.812476 TCGGAGCATTCGTGGGCG 62.812 66.667 0.00 0.00 39.02 6.13
584 585 4.812476 CGGAGCATTCGTGGGCGA 62.812 66.667 0.00 0.00 46.36 5.54
592 593 3.616086 TCGTGGGCGAGATGTCAT 58.384 55.556 0.00 0.00 42.81 3.06
593 594 2.801859 TCGTGGGCGAGATGTCATA 58.198 52.632 0.00 0.00 42.81 2.15
594 595 1.328279 TCGTGGGCGAGATGTCATAT 58.672 50.000 0.00 0.00 42.81 1.78
595 596 1.686587 TCGTGGGCGAGATGTCATATT 59.313 47.619 0.00 0.00 42.81 1.28
596 597 1.794701 CGTGGGCGAGATGTCATATTG 59.205 52.381 0.00 0.00 41.33 1.90
597 598 2.146342 GTGGGCGAGATGTCATATTGG 58.854 52.381 0.00 0.00 0.00 3.16
598 599 1.160137 GGGCGAGATGTCATATTGGC 58.840 55.000 11.85 11.85 0.00 4.52
599 600 1.543208 GGGCGAGATGTCATATTGGCA 60.543 52.381 19.64 0.00 35.91 4.92
600 601 2.221169 GGCGAGATGTCATATTGGCAA 58.779 47.619 14.68 0.68 34.67 4.52
601 602 2.225019 GGCGAGATGTCATATTGGCAAG 59.775 50.000 14.68 0.00 34.67 4.01
602 603 2.225019 GCGAGATGTCATATTGGCAAGG 59.775 50.000 5.96 0.00 34.67 3.61
603 604 3.732212 CGAGATGTCATATTGGCAAGGA 58.268 45.455 5.96 0.23 34.67 3.36
604 605 3.744942 CGAGATGTCATATTGGCAAGGAG 59.255 47.826 5.96 0.00 34.67 3.69
605 606 4.502087 CGAGATGTCATATTGGCAAGGAGA 60.502 45.833 5.96 2.43 34.67 3.71
606 607 4.712476 AGATGTCATATTGGCAAGGAGAC 58.288 43.478 16.87 16.87 34.67 3.36
607 608 3.998913 TGTCATATTGGCAAGGAGACA 57.001 42.857 20.41 20.41 32.70 3.41
608 609 4.508551 TGTCATATTGGCAAGGAGACAT 57.491 40.909 20.41 0.79 33.13 3.06
609 610 4.201657 TGTCATATTGGCAAGGAGACATG 58.798 43.478 20.41 10.84 33.13 3.21
619 620 4.224715 CAAGGAGACATGCATGCTTATG 57.775 45.455 26.53 17.09 0.00 1.90
630 631 3.286404 TGCTTATGCATTGGTGGCT 57.714 47.368 3.54 0.00 45.31 4.75
631 632 0.818938 TGCTTATGCATTGGTGGCTG 59.181 50.000 3.54 0.00 45.31 4.85
632 633 0.819582 GCTTATGCATTGGTGGCTGT 59.180 50.000 3.54 0.00 39.41 4.40
633 634 1.202336 GCTTATGCATTGGTGGCTGTC 60.202 52.381 3.54 0.00 39.41 3.51
634 635 1.064505 CTTATGCATTGGTGGCTGTCG 59.935 52.381 3.54 0.00 0.00 4.35
635 636 0.747644 TATGCATTGGTGGCTGTCGG 60.748 55.000 3.54 0.00 0.00 4.79
636 637 4.120331 GCATTGGTGGCTGTCGGC 62.120 66.667 0.00 0.00 40.90 5.54
637 638 2.360350 CATTGGTGGCTGTCGGCT 60.360 61.111 3.10 0.00 41.46 5.52
638 639 2.045926 ATTGGTGGCTGTCGGCTC 60.046 61.111 3.10 0.00 41.46 4.70
639 640 2.596851 ATTGGTGGCTGTCGGCTCT 61.597 57.895 3.10 0.00 41.46 4.09
640 641 1.264749 ATTGGTGGCTGTCGGCTCTA 61.265 55.000 3.10 0.00 41.46 2.43
641 642 1.888436 TTGGTGGCTGTCGGCTCTAG 61.888 60.000 3.10 0.00 41.46 2.43
642 643 2.052690 GGTGGCTGTCGGCTCTAGA 61.053 63.158 3.10 0.00 41.46 2.43
643 644 1.435515 GTGGCTGTCGGCTCTAGAG 59.564 63.158 15.85 15.85 41.46 2.43
653 654 3.615099 GCTCTAGAGCGACAGTGAC 57.385 57.895 28.04 0.70 45.29 3.67
654 655 0.805614 GCTCTAGAGCGACAGTGACA 59.194 55.000 28.04 0.00 45.29 3.58
655 656 1.202132 GCTCTAGAGCGACAGTGACAG 60.202 57.143 28.04 0.00 45.29 3.51
656 657 2.351455 CTCTAGAGCGACAGTGACAGA 58.649 52.381 6.86 0.00 0.00 3.41
657 658 2.744741 CTCTAGAGCGACAGTGACAGAA 59.255 50.000 6.86 0.00 0.00 3.02
658 659 3.146847 TCTAGAGCGACAGTGACAGAAA 58.853 45.455 0.00 0.00 0.00 2.52
659 660 2.890808 AGAGCGACAGTGACAGAAAA 57.109 45.000 0.00 0.00 0.00 2.29
660 661 3.393089 AGAGCGACAGTGACAGAAAAT 57.607 42.857 0.00 0.00 0.00 1.82
661 662 4.521130 AGAGCGACAGTGACAGAAAATA 57.479 40.909 0.00 0.00 0.00 1.40
662 663 4.489810 AGAGCGACAGTGACAGAAAATAG 58.510 43.478 0.00 0.00 0.00 1.73
663 664 4.021894 AGAGCGACAGTGACAGAAAATAGT 60.022 41.667 0.00 0.00 0.00 2.12
664 665 5.183331 AGAGCGACAGTGACAGAAAATAGTA 59.817 40.000 0.00 0.00 0.00 1.82
665 666 5.779922 AGCGACAGTGACAGAAAATAGTAA 58.220 37.500 0.00 0.00 0.00 2.24
666 667 6.220930 AGCGACAGTGACAGAAAATAGTAAA 58.779 36.000 0.00 0.00 0.00 2.01
667 668 6.366332 AGCGACAGTGACAGAAAATAGTAAAG 59.634 38.462 0.00 0.00 0.00 1.85
668 669 6.526222 CGACAGTGACAGAAAATAGTAAAGC 58.474 40.000 0.00 0.00 0.00 3.51
680 681 9.394477 AGAAAATAGTAAAGCGACATGTTTTTC 57.606 29.630 13.38 13.38 32.80 2.29
682 683 9.744468 AAAATAGTAAAGCGACATGTTTTTCTT 57.256 25.926 0.00 0.00 32.30 2.52
685 686 6.560711 AGTAAAGCGACATGTTTTTCTTTGT 58.439 32.000 17.83 8.52 32.80 2.83
733 734 6.330278 GGGAACAAGGCTACATCAAATTTAC 58.670 40.000 0.00 0.00 0.00 2.01
734 735 6.027749 GGAACAAGGCTACATCAAATTTACG 58.972 40.000 0.00 0.00 0.00 3.18
746 747 3.128589 TCAAATTTACGGGCAAGCAGATC 59.871 43.478 0.00 0.00 0.00 2.75
749 750 2.418368 TTACGGGCAAGCAGATCAAT 57.582 45.000 0.00 0.00 0.00 2.57
750 751 1.953559 TACGGGCAAGCAGATCAATC 58.046 50.000 0.00 0.00 0.00 2.67
751 752 0.035152 ACGGGCAAGCAGATCAATCA 60.035 50.000 0.00 0.00 0.00 2.57
752 753 1.097232 CGGGCAAGCAGATCAATCAA 58.903 50.000 0.00 0.00 0.00 2.57
754 755 2.094597 CGGGCAAGCAGATCAATCAAAA 60.095 45.455 0.00 0.00 0.00 2.44
755 756 3.256558 GGGCAAGCAGATCAATCAAAAC 58.743 45.455 0.00 0.00 0.00 2.43
756 757 3.056322 GGGCAAGCAGATCAATCAAAACT 60.056 43.478 0.00 0.00 0.00 2.66
757 758 4.158394 GGGCAAGCAGATCAATCAAAACTA 59.842 41.667 0.00 0.00 0.00 2.24
758 759 5.098211 GGCAAGCAGATCAATCAAAACTAC 58.902 41.667 0.00 0.00 0.00 2.73
759 760 5.335897 GGCAAGCAGATCAATCAAAACTACA 60.336 40.000 0.00 0.00 0.00 2.74
760 761 6.327934 GCAAGCAGATCAATCAAAACTACAT 58.672 36.000 0.00 0.00 0.00 2.29
766 767 8.887717 GCAGATCAATCAAAACTACATAAGAGT 58.112 33.333 0.00 0.00 0.00 3.24
807 808 2.817423 CGAGAGGGCATTTCAGCGC 61.817 63.158 0.00 0.00 46.61 5.92
902 921 3.564225 CCAGGTTCAGGTTGAAGTAACAC 59.436 47.826 0.00 0.00 41.18 3.32
916 935 1.134965 GTAACACGCTCATGCTCTCCT 60.135 52.381 0.00 0.00 36.97 3.69
917 936 1.186200 AACACGCTCATGCTCTCCTA 58.814 50.000 0.00 0.00 36.97 2.94
918 937 0.457851 ACACGCTCATGCTCTCCTAC 59.542 55.000 0.00 0.00 36.97 3.18
919 938 0.593518 CACGCTCATGCTCTCCTACG 60.594 60.000 0.00 0.00 36.97 3.51
920 939 1.032657 ACGCTCATGCTCTCCTACGT 61.033 55.000 0.00 0.00 36.97 3.57
921 940 0.945099 CGCTCATGCTCTCCTACGTA 59.055 55.000 0.00 0.00 36.97 3.57
922 941 1.537638 CGCTCATGCTCTCCTACGTAT 59.462 52.381 0.00 0.00 36.97 3.06
923 942 2.742589 CGCTCATGCTCTCCTACGTATA 59.257 50.000 0.00 0.00 36.97 1.47
924 943 3.375610 CGCTCATGCTCTCCTACGTATAT 59.624 47.826 0.00 0.00 36.97 0.86
925 944 4.571176 CGCTCATGCTCTCCTACGTATATA 59.429 45.833 0.00 0.00 36.97 0.86
926 945 5.237561 CGCTCATGCTCTCCTACGTATATAT 59.762 44.000 0.00 0.00 36.97 0.86
927 946 6.424207 CGCTCATGCTCTCCTACGTATATATA 59.576 42.308 0.00 0.00 36.97 0.86
928 947 7.118535 CGCTCATGCTCTCCTACGTATATATAT 59.881 40.741 0.00 0.00 36.97 0.86
929 948 9.438228 GCTCATGCTCTCCTACGTATATATATA 57.562 37.037 0.00 0.00 36.03 0.86
993 1026 6.206498 TGAAGTATCATCTTAACACCGATCG 58.794 40.000 8.51 8.51 0.00 3.69
1008 1042 2.069273 CGATCGCTCCCAATGGATTAC 58.931 52.381 0.26 0.00 40.80 1.89
1083 1126 1.673665 CGCCAGAGCCAAGAAAGCT 60.674 57.895 0.00 0.00 45.23 3.74
1407 1454 1.074752 GCGCTCTTCTTGAGTTCCTG 58.925 55.000 0.00 0.00 44.41 3.86
1566 1613 2.115911 GCTCTTCGGGCTCGAGAGA 61.116 63.158 28.33 22.58 46.75 3.10
1743 1802 3.890936 GAAGCAGCTGGAGCACGGT 62.891 63.158 17.12 0.00 45.16 4.83
1957 2022 1.171308 CATGGTCCAAGGCAAGTGAG 58.829 55.000 0.00 0.00 0.00 3.51
1996 3804 6.934645 CCATTAGTATTCCACAATGTATCGGT 59.065 38.462 0.00 0.00 30.25 4.69
2000 3808 5.932303 AGTATTCCACAATGTATCGGTATGC 59.068 40.000 0.00 0.00 0.00 3.14
2032 3858 1.394266 AACAAGTGCCAACCTGCCAG 61.394 55.000 0.00 0.00 0.00 4.85
2264 4109 3.420893 CAAAAGGATGGCAGGTCACTTA 58.579 45.455 0.00 0.00 0.00 2.24
2277 4146 4.062991 AGGTCACTTACTAACTTTTGCCG 58.937 43.478 0.00 0.00 0.00 5.69
2291 4160 1.643868 TTGCCGCCTAGCACAATTCG 61.644 55.000 0.00 0.00 43.97 3.34
2294 4163 1.209128 CCGCCTAGCACAATTCGTAG 58.791 55.000 0.00 0.00 0.00 3.51
2295 4164 0.577269 CGCCTAGCACAATTCGTAGC 59.423 55.000 0.00 0.00 0.00 3.58
2296 4165 1.651987 GCCTAGCACAATTCGTAGCA 58.348 50.000 0.00 0.00 0.00 3.49
2297 4166 2.006888 GCCTAGCACAATTCGTAGCAA 58.993 47.619 0.00 0.00 0.00 3.91
2298 4167 2.223044 GCCTAGCACAATTCGTAGCAAC 60.223 50.000 0.00 0.00 0.00 4.17
2320 4189 3.189287 CCGTAGAAAGCATCAGCAACTTT 59.811 43.478 0.00 0.00 45.49 2.66
2321 4190 4.153986 CGTAGAAAGCATCAGCAACTTTG 58.846 43.478 0.00 0.00 45.49 2.77
2390 4278 1.169661 GGCAAACGTGACCCACATGA 61.170 55.000 0.00 0.00 38.72 3.07
2404 4292 1.129251 CACATGAACGCGAGCATCTTT 59.871 47.619 15.93 0.00 0.00 2.52
2663 4560 1.716172 GAAATCGAGCGCAGAACCC 59.284 57.895 11.47 0.00 0.00 4.11
2713 4623 4.566004 CAATATCCGTATCATGGTCGGTT 58.434 43.478 18.10 14.25 43.94 4.44
2820 4767 2.936202 ACCACACAATTGCAGAGTTCT 58.064 42.857 5.05 0.00 0.00 3.01
2835 4782 5.448360 GCAGAGTTCTGTATCATGGCTTTTC 60.448 44.000 10.57 0.00 45.45 2.29
2836 4783 5.645067 CAGAGTTCTGTATCATGGCTTTTCA 59.355 40.000 0.91 0.00 39.09 2.69
2840 4788 6.094603 AGTTCTGTATCATGGCTTTTCATGTC 59.905 38.462 0.00 0.00 43.52 3.06
2913 4864 9.683069 GAATAAAATAGGCAACAACAGATATGG 57.317 33.333 0.00 0.00 41.41 2.74
2963 4914 1.599542 GGCATTCGTAGAGGCAACATC 59.400 52.381 0.00 0.00 39.81 3.06
2964 4915 2.555199 GCATTCGTAGAGGCAACATCT 58.445 47.619 0.00 0.00 38.43 2.90
2994 4945 4.380843 AGACTGGAGATACGAGATCCAT 57.619 45.455 0.00 0.00 42.10 3.41
3030 4981 3.325135 CACTCACTGGGAAGTAAACCTCT 59.675 47.826 0.00 0.00 0.00 3.69
3072 5023 8.496707 TCTTGTACACGTAGAATATCAGTACA 57.503 34.615 0.00 5.84 38.69 2.90
3073 5024 8.949177 TCTTGTACACGTAGAATATCAGTACAA 58.051 33.333 16.60 16.60 44.10 2.41
3075 5026 8.272545 TGTACACGTAGAATATCAGTACAAGT 57.727 34.615 7.12 0.00 37.85 3.16
3076 5027 9.382275 TGTACACGTAGAATATCAGTACAAGTA 57.618 33.333 7.12 0.00 37.85 2.24
3079 5030 8.281194 ACACGTAGAATATCAGTACAAGTATCG 58.719 37.037 0.00 0.00 0.00 2.92
3080 5031 8.281194 CACGTAGAATATCAGTACAAGTATCGT 58.719 37.037 0.00 0.00 0.00 3.73
3081 5032 8.494347 ACGTAGAATATCAGTACAAGTATCGTC 58.506 37.037 0.00 0.00 0.00 4.20
3082 5033 8.493547 CGTAGAATATCAGTACAAGTATCGTCA 58.506 37.037 0.00 0.00 0.00 4.35
3144 5095 3.728845 ACACAAAGAGAGCATGTAACGT 58.271 40.909 0.00 0.00 0.00 3.99
3145 5096 4.127171 ACACAAAGAGAGCATGTAACGTT 58.873 39.130 5.88 5.88 0.00 3.99
3146 5097 5.294356 ACACAAAGAGAGCATGTAACGTTA 58.706 37.500 3.29 3.29 0.00 3.18
3147 5098 5.176958 ACACAAAGAGAGCATGTAACGTTAC 59.823 40.000 27.65 27.65 0.00 2.50
3148 5099 4.384846 ACAAAGAGAGCATGTAACGTTACG 59.615 41.667 28.13 18.31 36.45 3.18
3149 5100 3.844577 AGAGAGCATGTAACGTTACGT 57.155 42.857 28.13 26.21 43.97 3.57
3172 5123 5.366829 TGACGACGAGAAATGTTCTAAGA 57.633 39.130 0.00 0.00 40.87 2.10
3173 5124 5.950883 TGACGACGAGAAATGTTCTAAGAT 58.049 37.500 0.00 0.00 40.87 2.40
3246 5197 0.110486 GGTTTGCTCCTGGTCCAGAA 59.890 55.000 21.23 0.00 32.44 3.02
3252 5203 2.224621 TGCTCCTGGTCCAGAAAAAGAG 60.225 50.000 21.23 17.25 32.44 2.85
3269 5220 9.750125 AGAAAAAGAGGTGCATTTAAAAAGTAG 57.250 29.630 0.00 0.00 0.00 2.57
3290 5241 5.582689 AGCCCCTAAAAAGAATCAATTCG 57.417 39.130 0.00 0.00 41.56 3.34
3336 5287 3.129852 CGCACTCGCAATTTATTTGGA 57.870 42.857 0.00 0.00 38.40 3.53
3364 5315 6.713762 TTATGTCCATTGGCATCCTTTTAG 57.286 37.500 13.60 0.00 0.00 1.85
3371 5322 5.653769 CCATTGGCATCCTTTTAGAAAGAGA 59.346 40.000 2.15 0.00 0.00 3.10
3372 5323 6.153340 CCATTGGCATCCTTTTAGAAAGAGAA 59.847 38.462 2.15 0.00 0.00 2.87
3426 5385 1.183549 ACGACACGGATTAGGAGCTT 58.816 50.000 0.00 0.00 0.00 3.74
3513 5472 7.552458 AATCTGAAATTTTTGGGTGTCAAAC 57.448 32.000 0.00 0.00 44.20 2.93
3535 5494 3.455910 CCTGATCAACCATTCTACTCCCA 59.544 47.826 0.00 0.00 0.00 4.37
3536 5495 4.103785 CCTGATCAACCATTCTACTCCCAT 59.896 45.833 0.00 0.00 0.00 4.00
3537 5496 5.039920 TGATCAACCATTCTACTCCCATG 57.960 43.478 0.00 0.00 0.00 3.66
3547 5506 4.188247 TCTACTCCCATGTGAAGTTTCG 57.812 45.455 0.00 0.00 0.00 3.46
3552 5511 3.138304 TCCCATGTGAAGTTTCGTGAAG 58.862 45.455 0.00 0.00 0.00 3.02
3572 5531 5.943416 TGAAGAAATGACGTCCATGGTATTT 59.057 36.000 14.12 10.81 35.24 1.40
3574 5533 6.436843 AGAAATGACGTCCATGGTATTTTC 57.563 37.500 14.12 12.76 35.24 2.29
3580 5539 3.823873 ACGTCCATGGTATTTTCAGCAAA 59.176 39.130 12.58 0.00 0.00 3.68
3627 5586 9.965824 AAAAGAAACTGTTTGAATGAATCGTAT 57.034 25.926 11.03 0.00 0.00 3.06
3631 5590 6.094739 ACTGTTTGAATGAATCGTATGTCG 57.905 37.500 0.00 0.00 41.41 4.35
3634 5593 5.062934 TGTTTGAATGAATCGTATGTCGGAC 59.937 40.000 0.00 0.00 40.32 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.827368 TTTTGCCCAACAGACCCAAC 59.173 50.000 0.00 0.00 0.00 3.77
2 3 2.685106 TATTTTGCCCAACAGACCCA 57.315 45.000 0.00 0.00 0.00 4.51
3 4 2.233676 CCTTATTTTGCCCAACAGACCC 59.766 50.000 0.00 0.00 0.00 4.46
4 5 2.353704 GCCTTATTTTGCCCAACAGACC 60.354 50.000 0.00 0.00 0.00 3.85
5 6 2.353704 GGCCTTATTTTGCCCAACAGAC 60.354 50.000 0.00 0.00 41.97 3.51
6 7 1.899142 GGCCTTATTTTGCCCAACAGA 59.101 47.619 0.00 0.00 41.97 3.41
7 8 2.385013 GGCCTTATTTTGCCCAACAG 57.615 50.000 0.00 0.00 41.97 3.16
14 15 3.673902 ACCAAACATGGCCTTATTTTGC 58.326 40.909 3.32 0.00 0.00 3.68
15 16 5.303971 TGAACCAAACATGGCCTTATTTTG 58.696 37.500 3.32 10.61 0.00 2.44
16 17 5.559148 TGAACCAAACATGGCCTTATTTT 57.441 34.783 3.32 0.00 0.00 1.82
17 18 5.760484 ATGAACCAAACATGGCCTTATTT 57.240 34.783 3.32 0.00 0.00 1.40
18 19 6.440328 ACTTATGAACCAAACATGGCCTTATT 59.560 34.615 3.32 0.00 0.00 1.40
19 20 5.957774 ACTTATGAACCAAACATGGCCTTAT 59.042 36.000 3.32 0.00 0.00 1.73
20 21 5.329399 ACTTATGAACCAAACATGGCCTTA 58.671 37.500 3.32 0.00 0.00 2.69
21 22 4.159557 ACTTATGAACCAAACATGGCCTT 58.840 39.130 3.32 0.00 0.00 4.35
22 23 3.763897 GACTTATGAACCAAACATGGCCT 59.236 43.478 3.32 0.00 0.00 5.19
23 24 3.119137 GGACTTATGAACCAAACATGGCC 60.119 47.826 0.00 0.00 0.00 5.36
24 25 3.763897 AGGACTTATGAACCAAACATGGC 59.236 43.478 0.00 0.00 0.00 4.40
25 26 6.884295 TCTTAGGACTTATGAACCAAACATGG 59.116 38.462 0.00 0.00 0.00 3.66
26 27 7.752695 GTCTTAGGACTTATGAACCAAACATG 58.247 38.462 0.00 0.00 39.24 3.21
27 28 7.923414 GTCTTAGGACTTATGAACCAAACAT 57.077 36.000 0.00 0.00 39.24 2.71
55 56 9.720769 CTTGAGACTTATAAGTTGGGACTAAAA 57.279 33.333 18.96 8.46 39.88 1.52
56 57 8.877195 ACTTGAGACTTATAAGTTGGGACTAAA 58.123 33.333 18.96 9.53 39.88 1.85
57 58 8.431910 ACTTGAGACTTATAAGTTGGGACTAA 57.568 34.615 18.96 2.28 39.88 2.24
58 59 7.123847 GGACTTGAGACTTATAAGTTGGGACTA 59.876 40.741 18.96 6.16 39.88 2.59
59 60 6.070710 GGACTTGAGACTTATAAGTTGGGACT 60.071 42.308 18.96 10.98 39.88 3.85
60 61 6.107343 GGACTTGAGACTTATAAGTTGGGAC 58.893 44.000 18.96 6.39 39.88 4.46
61 62 5.189145 GGGACTTGAGACTTATAAGTTGGGA 59.811 44.000 18.96 6.15 39.88 4.37
62 63 5.189934 AGGGACTTGAGACTTATAAGTTGGG 59.810 44.000 18.96 10.37 34.84 4.12
63 64 6.301169 AGGGACTTGAGACTTATAAGTTGG 57.699 41.667 18.96 10.07 34.84 3.77
64 65 9.720769 TTTTAGGGACTTGAGACTTATAAGTTG 57.279 33.333 18.96 9.81 38.78 3.16
66 67 9.945904 CTTTTTAGGGACTTGAGACTTATAAGT 57.054 33.333 18.05 18.05 40.66 2.24
67 68 9.945904 ACTTTTTAGGGACTTGAGACTTATAAG 57.054 33.333 11.05 11.05 41.75 1.73
68 69 9.939802 GACTTTTTAGGGACTTGAGACTTATAA 57.060 33.333 0.00 0.00 41.75 0.98
69 70 8.537858 GGACTTTTTAGGGACTTGAGACTTATA 58.462 37.037 0.00 0.00 41.75 0.98
70 71 7.395617 GGACTTTTTAGGGACTTGAGACTTAT 58.604 38.462 0.00 0.00 41.75 1.73
71 72 6.239800 GGGACTTTTTAGGGACTTGAGACTTA 60.240 42.308 0.00 0.00 41.75 2.24
72 73 5.456330 GGGACTTTTTAGGGACTTGAGACTT 60.456 44.000 0.00 0.00 41.75 3.01
73 74 4.041815 GGGACTTTTTAGGGACTTGAGACT 59.958 45.833 0.00 0.00 41.75 3.24
74 75 4.041815 AGGGACTTTTTAGGGACTTGAGAC 59.958 45.833 0.00 0.00 34.75 3.36
75 76 4.240323 AGGGACTTTTTAGGGACTTGAGA 58.760 43.478 0.00 0.00 34.75 3.27
76 77 4.642466 AGGGACTTTTTAGGGACTTGAG 57.358 45.455 0.00 0.00 34.75 3.02
77 78 4.287845 GGTAGGGACTTTTTAGGGACTTGA 59.712 45.833 0.00 0.00 39.49 3.02
78 79 4.288887 AGGTAGGGACTTTTTAGGGACTTG 59.711 45.833 0.00 0.00 39.49 3.16
79 80 4.288887 CAGGTAGGGACTTTTTAGGGACTT 59.711 45.833 0.00 0.00 39.49 3.01
80 81 3.844804 CAGGTAGGGACTTTTTAGGGACT 59.155 47.826 0.00 0.00 41.75 3.85
81 82 3.586174 ACAGGTAGGGACTTTTTAGGGAC 59.414 47.826 0.00 0.00 41.75 4.46
82 83 3.878086 ACAGGTAGGGACTTTTTAGGGA 58.122 45.455 0.00 0.00 41.75 4.20
83 84 4.652679 AACAGGTAGGGACTTTTTAGGG 57.347 45.455 0.00 0.00 41.75 3.53
84 85 4.765339 CCAAACAGGTAGGGACTTTTTAGG 59.235 45.833 0.00 0.00 41.75 2.69
85 86 5.959618 CCAAACAGGTAGGGACTTTTTAG 57.040 43.478 0.00 0.00 41.75 1.85
99 100 2.364972 AGTCCCAGAAACCAAACAGG 57.635 50.000 0.00 0.00 45.67 4.00
100 101 6.715264 ACTTATAAGTCCCAGAAACCAAACAG 59.285 38.462 12.50 0.00 32.86 3.16
101 102 6.607019 ACTTATAAGTCCCAGAAACCAAACA 58.393 36.000 12.50 0.00 32.86 2.83
143 144 9.102453 GAGGGACTTATAGGGATTTATAGTTGT 57.898 37.037 0.00 0.00 41.55 3.32
144 145 8.541234 GGAGGGACTTATAGGGATTTATAGTTG 58.459 40.741 0.00 0.00 41.55 3.16
145 146 8.474268 AGGAGGGACTTATAGGGATTTATAGTT 58.526 37.037 0.00 0.00 41.55 2.24
146 147 8.025299 AGGAGGGACTTATAGGGATTTATAGT 57.975 38.462 0.00 0.00 41.55 2.12
147 148 8.919018 AAGGAGGGACTTATAGGGATTTATAG 57.081 38.462 0.00 0.00 41.55 1.31
149 150 9.340223 CTTAAGGAGGGACTTATAGGGATTTAT 57.660 37.037 0.00 0.00 41.55 1.40
150 151 8.525577 TCTTAAGGAGGGACTTATAGGGATTTA 58.474 37.037 1.85 0.00 41.55 1.40
151 152 7.379139 TCTTAAGGAGGGACTTATAGGGATTT 58.621 38.462 1.85 0.00 41.55 2.17
152 153 6.946526 TCTTAAGGAGGGACTTATAGGGATT 58.053 40.000 1.85 0.00 41.55 3.01
153 154 6.106494 ACTCTTAAGGAGGGACTTATAGGGAT 59.894 42.308 1.85 0.00 45.83 3.85
154 155 5.439059 ACTCTTAAGGAGGGACTTATAGGGA 59.561 44.000 1.85 0.00 45.83 4.20
155 156 5.718039 ACTCTTAAGGAGGGACTTATAGGG 58.282 45.833 1.85 0.00 45.83 3.53
156 157 6.616577 AGACTCTTAAGGAGGGACTTATAGG 58.383 44.000 1.85 0.00 45.83 2.57
157 158 9.816787 ATAAGACTCTTAAGGAGGGACTTATAG 57.183 37.037 1.85 0.00 45.83 1.31
159 160 9.508721 AAATAAGACTCTTAAGGAGGGACTTAT 57.491 33.333 1.85 11.48 45.83 1.73
160 161 8.912614 AAATAAGACTCTTAAGGAGGGACTTA 57.087 34.615 1.85 10.13 45.83 2.24
161 162 7.458170 TGAAATAAGACTCTTAAGGAGGGACTT 59.542 37.037 1.85 8.68 45.83 3.01
162 163 6.960542 TGAAATAAGACTCTTAAGGAGGGACT 59.039 38.462 1.85 0.00 45.83 3.85
163 164 7.184067 TGAAATAAGACTCTTAAGGAGGGAC 57.816 40.000 1.85 0.00 45.83 4.46
164 165 7.996758 ATGAAATAAGACTCTTAAGGAGGGA 57.003 36.000 1.85 0.00 45.83 4.20
180 181 5.960811 TGGGCATTTGGGACTTATGAAATAA 59.039 36.000 0.00 0.00 36.20 1.40
181 182 5.362430 GTGGGCATTTGGGACTTATGAAATA 59.638 40.000 0.00 0.00 0.00 1.40
182 183 4.162131 GTGGGCATTTGGGACTTATGAAAT 59.838 41.667 0.00 0.00 0.00 2.17
183 184 3.513515 GTGGGCATTTGGGACTTATGAAA 59.486 43.478 0.00 0.00 0.00 2.69
184 185 3.096092 GTGGGCATTTGGGACTTATGAA 58.904 45.455 0.00 0.00 0.00 2.57
185 186 2.311542 AGTGGGCATTTGGGACTTATGA 59.688 45.455 0.00 0.00 0.00 2.15
186 187 2.738743 AGTGGGCATTTGGGACTTATG 58.261 47.619 0.00 0.00 0.00 1.90
187 188 3.473113 AAGTGGGCATTTGGGACTTAT 57.527 42.857 0.00 0.00 0.00 1.73
188 189 2.990740 AAGTGGGCATTTGGGACTTA 57.009 45.000 0.00 0.00 0.00 2.24
189 190 2.101640 AAAGTGGGCATTTGGGACTT 57.898 45.000 0.00 0.00 0.00 3.01
190 191 2.990740 TAAAGTGGGCATTTGGGACT 57.009 45.000 0.00 0.00 0.00 3.85
191 192 2.897326 ACTTAAAGTGGGCATTTGGGAC 59.103 45.455 0.00 0.00 0.00 4.46
192 193 3.161866 GACTTAAAGTGGGCATTTGGGA 58.838 45.455 0.00 0.00 0.00 4.37
193 194 2.233676 GGACTTAAAGTGGGCATTTGGG 59.766 50.000 0.00 0.00 0.00 4.12
194 195 2.233676 GGGACTTAAAGTGGGCATTTGG 59.766 50.000 0.00 0.00 0.00 3.28
195 196 3.165071 AGGGACTTAAAGTGGGCATTTG 58.835 45.455 0.00 0.00 27.25 2.32
196 197 3.542969 AGGGACTTAAAGTGGGCATTT 57.457 42.857 0.00 0.00 27.25 2.32
197 198 4.881157 ATAGGGACTTAAAGTGGGCATT 57.119 40.909 0.00 0.00 41.75 3.56
198 199 5.432060 ACTTATAGGGACTTAAAGTGGGCAT 59.568 40.000 0.00 0.00 39.58 4.40
199 200 4.786454 ACTTATAGGGACTTAAAGTGGGCA 59.214 41.667 0.00 0.00 39.58 5.36
200 201 5.366460 GACTTATAGGGACTTAAAGTGGGC 58.634 45.833 0.00 0.00 40.60 5.36
201 202 5.163227 GGGACTTATAGGGACTTAAAGTGGG 60.163 48.000 0.00 0.00 40.60 4.61
202 203 5.666265 AGGGACTTATAGGGACTTAAAGTGG 59.334 44.000 0.00 0.00 40.60 4.00
203 204 6.612049 AGAGGGACTTATAGGGACTTAAAGTG 59.388 42.308 0.00 0.00 40.60 3.16
204 205 6.754178 AGAGGGACTTATAGGGACTTAAAGT 58.246 40.000 0.00 0.00 42.31 2.66
205 206 7.125963 ACAAGAGGGACTTATAGGGACTTAAAG 59.874 40.741 0.00 0.00 41.55 1.85
206 207 6.964086 ACAAGAGGGACTTATAGGGACTTAAA 59.036 38.462 0.00 0.00 41.55 1.52
207 208 6.509386 ACAAGAGGGACTTATAGGGACTTAA 58.491 40.000 0.00 0.00 41.55 1.85
208 209 6.101274 ACAAGAGGGACTTATAGGGACTTA 57.899 41.667 0.00 0.00 41.55 2.24
209 210 4.961585 ACAAGAGGGACTTATAGGGACTT 58.038 43.478 0.00 0.00 41.55 3.01
210 211 4.628661 ACAAGAGGGACTTATAGGGACT 57.371 45.455 0.00 0.00 41.55 3.85
211 212 5.429130 CAAACAAGAGGGACTTATAGGGAC 58.571 45.833 0.00 0.00 41.55 4.46
212 213 4.473559 CCAAACAAGAGGGACTTATAGGGA 59.526 45.833 0.00 0.00 41.55 4.20
213 214 4.227527 ACCAAACAAGAGGGACTTATAGGG 59.772 45.833 0.00 0.00 41.55 3.53
214 215 5.437191 ACCAAACAAGAGGGACTTATAGG 57.563 43.478 0.00 0.00 41.55 2.57
215 216 8.319146 TCTAAACCAAACAAGAGGGACTTATAG 58.681 37.037 0.00 0.00 41.55 1.31
216 217 8.209802 TCTAAACCAAACAAGAGGGACTTATA 57.790 34.615 0.00 0.00 41.55 0.98
217 218 7.086685 TCTAAACCAAACAAGAGGGACTTAT 57.913 36.000 0.00 0.00 41.55 1.73
218 219 6.503560 TCTAAACCAAACAAGAGGGACTTA 57.496 37.500 0.00 0.00 41.55 2.24
219 220 5.382664 TCTAAACCAAACAAGAGGGACTT 57.617 39.130 0.00 0.00 41.55 3.01
220 221 5.749032 CCATCTAAACCAAACAAGAGGGACT 60.749 44.000 0.00 0.00 41.34 3.85
221 222 4.459337 CCATCTAAACCAAACAAGAGGGAC 59.541 45.833 0.00 0.00 41.34 4.46
222 223 4.508405 CCCATCTAAACCAAACAAGAGGGA 60.508 45.833 3.60 0.00 41.34 4.20
223 224 3.763897 CCCATCTAAACCAAACAAGAGGG 59.236 47.826 0.00 0.00 39.15 4.30
224 225 4.459337 GTCCCATCTAAACCAAACAAGAGG 59.541 45.833 0.00 0.00 0.00 3.69
225 226 5.316987 AGTCCCATCTAAACCAAACAAGAG 58.683 41.667 0.00 0.00 0.00 2.85
226 227 5.319043 AGTCCCATCTAAACCAAACAAGA 57.681 39.130 0.00 0.00 0.00 3.02
227 228 7.703058 ATAAGTCCCATCTAAACCAAACAAG 57.297 36.000 0.00 0.00 0.00 3.16
228 229 7.832187 CCTATAAGTCCCATCTAAACCAAACAA 59.168 37.037 0.00 0.00 0.00 2.83
229 230 7.343357 CCTATAAGTCCCATCTAAACCAAACA 58.657 38.462 0.00 0.00 0.00 2.83
230 231 6.771267 CCCTATAAGTCCCATCTAAACCAAAC 59.229 42.308 0.00 0.00 0.00 2.93
231 232 6.679303 TCCCTATAAGTCCCATCTAAACCAAA 59.321 38.462 0.00 0.00 0.00 3.28
232 233 6.100714 GTCCCTATAAGTCCCATCTAAACCAA 59.899 42.308 0.00 0.00 0.00 3.67
233 234 5.605488 GTCCCTATAAGTCCCATCTAAACCA 59.395 44.000 0.00 0.00 0.00 3.67
234 235 5.845065 AGTCCCTATAAGTCCCATCTAAACC 59.155 44.000 0.00 0.00 0.00 3.27
235 236 6.997942 AGTCCCTATAAGTCCCATCTAAAC 57.002 41.667 0.00 0.00 0.00 2.01
236 237 8.401955 AAAAGTCCCTATAAGTCCCATCTAAA 57.598 34.615 0.00 0.00 0.00 1.85
237 238 8.401955 AAAAAGTCCCTATAAGTCCCATCTAA 57.598 34.615 0.00 0.00 0.00 2.10
239 240 6.910259 AAAAAGTCCCTATAAGTCCCATCT 57.090 37.500 0.00 0.00 0.00 2.90
263 264 9.661563 CCAGTGACTTATTGGTTTATGTACTTA 57.338 33.333 0.00 0.00 31.82 2.24
264 265 8.380099 TCCAGTGACTTATTGGTTTATGTACTT 58.620 33.333 0.00 0.00 37.44 2.24
265 266 7.913789 TCCAGTGACTTATTGGTTTATGTACT 58.086 34.615 0.00 0.00 37.44 2.73
266 267 8.556213 TTCCAGTGACTTATTGGTTTATGTAC 57.444 34.615 0.00 0.00 37.44 2.90
267 268 9.005777 GTTTCCAGTGACTTATTGGTTTATGTA 57.994 33.333 0.00 0.00 37.44 2.29
268 269 7.504238 TGTTTCCAGTGACTTATTGGTTTATGT 59.496 33.333 0.00 0.00 37.44 2.29
269 270 7.881142 TGTTTCCAGTGACTTATTGGTTTATG 58.119 34.615 0.00 0.00 37.44 1.90
270 271 8.472007 TTGTTTCCAGTGACTTATTGGTTTAT 57.528 30.769 0.00 0.00 37.44 1.40
271 272 7.883391 TTGTTTCCAGTGACTTATTGGTTTA 57.117 32.000 0.00 0.00 37.44 2.01
272 273 6.783708 TTGTTTCCAGTGACTTATTGGTTT 57.216 33.333 0.00 0.00 37.44 3.27
273 274 6.153680 TGTTTGTTTCCAGTGACTTATTGGTT 59.846 34.615 0.00 0.00 37.44 3.67
274 275 5.654650 TGTTTGTTTCCAGTGACTTATTGGT 59.345 36.000 0.00 0.00 37.44 3.67
275 276 5.977129 GTGTTTGTTTCCAGTGACTTATTGG 59.023 40.000 0.00 0.00 37.51 3.16
276 277 5.977129 GGTGTTTGTTTCCAGTGACTTATTG 59.023 40.000 0.00 0.00 0.00 1.90
277 278 5.068591 GGGTGTTTGTTTCCAGTGACTTATT 59.931 40.000 0.00 0.00 0.00 1.40
278 279 4.583073 GGGTGTTTGTTTCCAGTGACTTAT 59.417 41.667 0.00 0.00 0.00 1.73
279 280 3.949113 GGGTGTTTGTTTCCAGTGACTTA 59.051 43.478 0.00 0.00 0.00 2.24
280 281 2.758423 GGGTGTTTGTTTCCAGTGACTT 59.242 45.455 0.00 0.00 0.00 3.01
281 282 2.025321 AGGGTGTTTGTTTCCAGTGACT 60.025 45.455 0.00 0.00 0.00 3.41
282 283 2.357952 GAGGGTGTTTGTTTCCAGTGAC 59.642 50.000 0.00 0.00 0.00 3.67
283 284 2.241176 AGAGGGTGTTTGTTTCCAGTGA 59.759 45.455 0.00 0.00 0.00 3.41
284 285 2.654863 AGAGGGTGTTTGTTTCCAGTG 58.345 47.619 0.00 0.00 0.00 3.66
285 286 4.079958 ACTTAGAGGGTGTTTGTTTCCAGT 60.080 41.667 0.00 0.00 0.00 4.00
286 287 4.461198 ACTTAGAGGGTGTTTGTTTCCAG 58.539 43.478 0.00 0.00 0.00 3.86
287 288 4.080243 TGACTTAGAGGGTGTTTGTTTCCA 60.080 41.667 0.00 0.00 0.00 3.53
288 289 4.275196 GTGACTTAGAGGGTGTTTGTTTCC 59.725 45.833 0.00 0.00 0.00 3.13
289 290 5.123936 AGTGACTTAGAGGGTGTTTGTTTC 58.876 41.667 0.00 0.00 0.00 2.78
290 291 5.112129 AGTGACTTAGAGGGTGTTTGTTT 57.888 39.130 0.00 0.00 0.00 2.83
291 292 4.772886 AGTGACTTAGAGGGTGTTTGTT 57.227 40.909 0.00 0.00 0.00 2.83
292 293 4.772886 AAGTGACTTAGAGGGTGTTTGT 57.227 40.909 0.00 0.00 0.00 2.83
293 294 6.451064 AAAAAGTGACTTAGAGGGTGTTTG 57.549 37.500 0.00 0.00 0.00 2.93
318 319 9.715121 AGTCACCAACTTATAAGTCGAAAAATA 57.285 29.630 18.28 0.00 38.57 1.40
319 320 8.617290 AGTCACCAACTTATAAGTCGAAAAAT 57.383 30.769 18.28 0.00 38.57 1.82
320 321 8.441312 AAGTCACCAACTTATAAGTCGAAAAA 57.559 30.769 18.28 1.23 46.55 1.94
333 334 6.155393 TTTGGTTCCAAATAAGTCACCAACTT 59.845 34.615 12.29 0.00 42.59 2.66
334 335 4.798882 TGGTTCCAAATAAGTCACCAACT 58.201 39.130 0.00 0.00 41.10 3.16
335 336 5.523438 TTGGTTCCAAATAAGTCACCAAC 57.477 39.130 1.42 0.00 38.97 3.77
336 337 5.422331 TGTTTGGTTCCAAATAAGTCACCAA 59.578 36.000 18.11 0.00 41.48 3.67
337 338 4.956700 TGTTTGGTTCCAAATAAGTCACCA 59.043 37.500 18.11 7.77 38.07 4.17
338 339 5.508994 CCTGTTTGGTTCCAAATAAGTCACC 60.509 44.000 18.11 5.59 38.07 4.02
339 340 5.528870 CCTGTTTGGTTCCAAATAAGTCAC 58.471 41.667 18.11 6.79 38.07 3.67
340 341 4.038642 GCCTGTTTGGTTCCAAATAAGTCA 59.961 41.667 18.11 10.94 38.07 3.41
341 342 4.556233 GCCTGTTTGGTTCCAAATAAGTC 58.444 43.478 18.11 7.50 38.07 3.01
342 343 3.323691 GGCCTGTTTGGTTCCAAATAAGT 59.676 43.478 18.11 0.00 38.07 2.24
343 344 3.306710 GGGCCTGTTTGGTTCCAAATAAG 60.307 47.826 18.11 17.05 38.07 1.73
344 345 2.635427 GGGCCTGTTTGGTTCCAAATAA 59.365 45.455 18.11 10.23 38.07 1.40
345 346 2.158234 AGGGCCTGTTTGGTTCCAAATA 60.158 45.455 18.11 14.87 38.07 1.40
346 347 1.055849 GGGCCTGTTTGGTTCCAAAT 58.944 50.000 18.11 0.00 38.07 2.32
347 348 0.031616 AGGGCCTGTTTGGTTCCAAA 60.032 50.000 4.50 12.29 38.35 3.28
348 349 0.031616 AAGGGCCTGTTTGGTTCCAA 60.032 50.000 6.92 0.00 38.35 3.53
349 350 0.854218 TAAGGGCCTGTTTGGTTCCA 59.146 50.000 6.92 0.00 38.35 3.53
350 351 1.616865 GTTAAGGGCCTGTTTGGTTCC 59.383 52.381 6.92 0.00 38.35 3.62
351 352 2.296190 CTGTTAAGGGCCTGTTTGGTTC 59.704 50.000 6.92 0.00 38.35 3.62
352 353 2.091555 TCTGTTAAGGGCCTGTTTGGTT 60.092 45.455 6.92 0.00 38.35 3.67
353 354 1.497286 TCTGTTAAGGGCCTGTTTGGT 59.503 47.619 6.92 0.00 38.35 3.67
354 355 2.286365 TCTGTTAAGGGCCTGTTTGG 57.714 50.000 6.92 0.00 39.35 3.28
355 356 2.755103 GGATCTGTTAAGGGCCTGTTTG 59.245 50.000 6.92 0.00 0.00 2.93
356 357 2.378547 TGGATCTGTTAAGGGCCTGTTT 59.621 45.455 6.92 0.00 0.00 2.83
357 358 1.992557 TGGATCTGTTAAGGGCCTGTT 59.007 47.619 6.92 0.00 0.00 3.16
358 359 1.282157 GTGGATCTGTTAAGGGCCTGT 59.718 52.381 6.92 0.00 0.00 4.00
359 360 1.561542 AGTGGATCTGTTAAGGGCCTG 59.438 52.381 6.92 0.00 0.00 4.85
360 361 1.840635 GAGTGGATCTGTTAAGGGCCT 59.159 52.381 0.00 0.00 0.00 5.19
361 362 1.840635 AGAGTGGATCTGTTAAGGGCC 59.159 52.381 0.00 0.00 36.69 5.80
362 363 3.636153 AAGAGTGGATCTGTTAAGGGC 57.364 47.619 0.00 0.00 38.67 5.19
363 364 4.226168 AGGAAAGAGTGGATCTGTTAAGGG 59.774 45.833 0.00 0.00 38.67 3.95
364 365 5.428184 AGGAAAGAGTGGATCTGTTAAGG 57.572 43.478 0.00 0.00 38.67 2.69
365 366 5.645497 CCAAGGAAAGAGTGGATCTGTTAAG 59.355 44.000 0.00 0.00 38.67 1.85
366 367 5.073144 ACCAAGGAAAGAGTGGATCTGTTAA 59.927 40.000 0.00 0.00 38.67 2.01
367 368 4.597507 ACCAAGGAAAGAGTGGATCTGTTA 59.402 41.667 0.00 0.00 38.67 2.41
368 369 3.395941 ACCAAGGAAAGAGTGGATCTGTT 59.604 43.478 0.00 0.00 38.67 3.16
369 370 2.982488 ACCAAGGAAAGAGTGGATCTGT 59.018 45.455 0.00 0.00 38.67 3.41
370 371 3.710209 ACCAAGGAAAGAGTGGATCTG 57.290 47.619 0.00 0.00 38.67 2.90
371 372 4.384647 GCATACCAAGGAAAGAGTGGATCT 60.385 45.833 0.00 0.00 41.27 2.75
372 373 3.879892 GCATACCAAGGAAAGAGTGGATC 59.120 47.826 0.00 0.00 36.23 3.36
373 374 3.682718 CGCATACCAAGGAAAGAGTGGAT 60.683 47.826 0.00 0.00 36.23 3.41
374 375 2.354704 CGCATACCAAGGAAAGAGTGGA 60.355 50.000 0.00 0.00 36.23 4.02
375 376 2.009774 CGCATACCAAGGAAAGAGTGG 58.990 52.381 0.00 0.00 38.46 4.00
376 377 2.416547 CACGCATACCAAGGAAAGAGTG 59.583 50.000 0.00 0.00 0.00 3.51
377 378 2.038557 ACACGCATACCAAGGAAAGAGT 59.961 45.455 0.00 0.00 0.00 3.24
378 379 2.416547 CACACGCATACCAAGGAAAGAG 59.583 50.000 0.00 0.00 0.00 2.85
379 380 2.037902 TCACACGCATACCAAGGAAAGA 59.962 45.455 0.00 0.00 0.00 2.52
380 381 2.416547 CTCACACGCATACCAAGGAAAG 59.583 50.000 0.00 0.00 0.00 2.62
381 382 2.037902 TCTCACACGCATACCAAGGAAA 59.962 45.455 0.00 0.00 0.00 3.13
382 383 1.621317 TCTCACACGCATACCAAGGAA 59.379 47.619 0.00 0.00 0.00 3.36
383 384 1.262417 TCTCACACGCATACCAAGGA 58.738 50.000 0.00 0.00 0.00 3.36
384 385 2.002586 CTTCTCACACGCATACCAAGG 58.997 52.381 0.00 0.00 0.00 3.61
385 386 2.688507 ACTTCTCACACGCATACCAAG 58.311 47.619 0.00 0.00 0.00 3.61
386 387 2.831685 ACTTCTCACACGCATACCAA 57.168 45.000 0.00 0.00 0.00 3.67
387 388 2.831685 AACTTCTCACACGCATACCA 57.168 45.000 0.00 0.00 0.00 3.25
388 389 3.001330 GCATAACTTCTCACACGCATACC 59.999 47.826 0.00 0.00 0.00 2.73
389 390 3.616821 TGCATAACTTCTCACACGCATAC 59.383 43.478 0.00 0.00 0.00 2.39
390 391 3.616821 GTGCATAACTTCTCACACGCATA 59.383 43.478 0.00 0.00 0.00 3.14
391 392 2.416547 GTGCATAACTTCTCACACGCAT 59.583 45.455 0.00 0.00 0.00 4.73
392 393 1.798223 GTGCATAACTTCTCACACGCA 59.202 47.619 0.00 0.00 0.00 5.24
393 394 2.069273 AGTGCATAACTTCTCACACGC 58.931 47.619 0.00 0.00 34.57 5.34
394 395 3.317150 TCAGTGCATAACTTCTCACACG 58.683 45.455 0.00 0.00 36.83 4.49
395 396 4.310769 ACTCAGTGCATAACTTCTCACAC 58.689 43.478 0.00 0.00 36.83 3.82
396 397 4.607293 ACTCAGTGCATAACTTCTCACA 57.393 40.909 0.00 0.00 36.83 3.58
397 398 7.421530 TTTTACTCAGTGCATAACTTCTCAC 57.578 36.000 0.00 0.00 36.83 3.51
426 427 2.897969 GGCCTCATATACTTCCTCCGAA 59.102 50.000 0.00 0.00 0.00 4.30
427 428 2.158370 TGGCCTCATATACTTCCTCCGA 60.158 50.000 3.32 0.00 0.00 4.55
428 429 2.248248 TGGCCTCATATACTTCCTCCG 58.752 52.381 3.32 0.00 0.00 4.63
429 430 4.706842 TTTGGCCTCATATACTTCCTCC 57.293 45.455 3.32 0.00 0.00 4.30
430 431 6.772716 TCAAATTTGGCCTCATATACTTCCTC 59.227 38.462 17.90 0.00 0.00 3.71
431 432 6.547510 GTCAAATTTGGCCTCATATACTTCCT 59.452 38.462 17.90 0.00 0.00 3.36
432 433 6.321181 TGTCAAATTTGGCCTCATATACTTCC 59.679 38.462 19.63 0.00 30.03 3.46
433 434 7.333528 TGTCAAATTTGGCCTCATATACTTC 57.666 36.000 19.63 0.00 30.03 3.01
434 435 7.397192 AGTTGTCAAATTTGGCCTCATATACTT 59.603 33.333 19.63 0.00 30.03 2.24
435 436 6.891908 AGTTGTCAAATTTGGCCTCATATACT 59.108 34.615 19.63 8.64 30.03 2.12
436 437 7.100458 AGTTGTCAAATTTGGCCTCATATAC 57.900 36.000 19.63 7.06 30.03 1.47
437 438 8.849168 CATAGTTGTCAAATTTGGCCTCATATA 58.151 33.333 19.63 5.28 30.03 0.86
438 439 7.560991 TCATAGTTGTCAAATTTGGCCTCATAT 59.439 33.333 19.63 9.89 30.03 1.78
439 440 6.889177 TCATAGTTGTCAAATTTGGCCTCATA 59.111 34.615 19.63 8.15 30.03 2.15
440 441 5.716228 TCATAGTTGTCAAATTTGGCCTCAT 59.284 36.000 19.63 6.27 30.03 2.90
441 442 5.076182 TCATAGTTGTCAAATTTGGCCTCA 58.924 37.500 19.63 10.33 30.03 3.86
442 443 5.643379 TCATAGTTGTCAAATTTGGCCTC 57.357 39.130 19.63 12.24 30.03 4.70
443 444 5.716228 TCATCATAGTTGTCAAATTTGGCCT 59.284 36.000 19.63 12.63 30.03 5.19
444 445 5.964758 TCATCATAGTTGTCAAATTTGGCC 58.035 37.500 19.63 10.45 30.03 5.36
445 446 8.623903 TCTATCATCATAGTTGTCAAATTTGGC 58.376 33.333 15.92 15.92 34.54 4.52
449 450 9.570468 AGCATCTATCATCATAGTTGTCAAATT 57.430 29.630 0.00 0.00 35.76 1.82
450 451 9.217278 GAGCATCTATCATCATAGTTGTCAAAT 57.783 33.333 0.00 0.00 35.76 2.32
451 452 7.658982 GGAGCATCTATCATCATAGTTGTCAAA 59.341 37.037 0.00 0.00 35.76 2.69
452 453 7.157347 GGAGCATCTATCATCATAGTTGTCAA 58.843 38.462 0.00 0.00 35.76 3.18
453 454 6.295518 GGGAGCATCTATCATCATAGTTGTCA 60.296 42.308 0.00 0.00 35.76 3.58
454 455 6.105333 GGGAGCATCTATCATCATAGTTGTC 58.895 44.000 0.00 0.00 35.76 3.18
455 456 5.545335 TGGGAGCATCTATCATCATAGTTGT 59.455 40.000 0.00 0.00 35.76 3.32
456 457 6.046290 TGGGAGCATCTATCATCATAGTTG 57.954 41.667 0.00 0.00 36.17 3.16
457 458 5.189342 CCTGGGAGCATCTATCATCATAGTT 59.811 44.000 0.00 0.00 34.54 2.24
458 459 4.715792 CCTGGGAGCATCTATCATCATAGT 59.284 45.833 0.00 0.00 34.54 2.12
459 460 4.443175 GCCTGGGAGCATCTATCATCATAG 60.443 50.000 0.00 0.00 34.24 2.23
460 461 3.453717 GCCTGGGAGCATCTATCATCATA 59.546 47.826 0.00 0.00 33.73 2.15
461 462 2.239150 GCCTGGGAGCATCTATCATCAT 59.761 50.000 0.00 0.00 33.73 2.45
462 463 1.627329 GCCTGGGAGCATCTATCATCA 59.373 52.381 0.00 0.00 33.73 3.07
463 464 1.065564 GGCCTGGGAGCATCTATCATC 60.066 57.143 0.00 0.00 33.73 2.92
464 465 0.990374 GGCCTGGGAGCATCTATCAT 59.010 55.000 0.00 0.00 33.73 2.45
465 466 0.104777 AGGCCTGGGAGCATCTATCA 60.105 55.000 3.11 0.00 33.73 2.15
466 467 1.944177 TAGGCCTGGGAGCATCTATC 58.056 55.000 17.99 0.00 33.73 2.08
467 468 2.657355 ATAGGCCTGGGAGCATCTAT 57.343 50.000 17.99 0.00 33.73 1.98
468 469 3.784311 ATATAGGCCTGGGAGCATCTA 57.216 47.619 17.99 0.00 33.73 1.98
469 470 2.657355 ATATAGGCCTGGGAGCATCT 57.343 50.000 17.99 0.00 33.73 2.90
470 471 5.128919 CAAATATATAGGCCTGGGAGCATC 58.871 45.833 17.99 0.00 0.00 3.91
471 472 4.079558 CCAAATATATAGGCCTGGGAGCAT 60.080 45.833 17.99 1.30 0.00 3.79
472 473 3.266772 CCAAATATATAGGCCTGGGAGCA 59.733 47.826 17.99 0.00 0.00 4.26
473 474 3.523564 TCCAAATATATAGGCCTGGGAGC 59.476 47.826 17.99 0.00 0.00 4.70
474 475 5.429762 TCATCCAAATATATAGGCCTGGGAG 59.570 44.000 17.99 2.76 0.00 4.30
475 476 5.358306 TCATCCAAATATATAGGCCTGGGA 58.642 41.667 17.99 9.38 0.00 4.37
476 477 5.715439 TCATCCAAATATATAGGCCTGGG 57.285 43.478 17.99 3.94 0.00 4.45
477 478 7.890127 TCTTTTCATCCAAATATATAGGCCTGG 59.110 37.037 17.99 6.24 0.00 4.45
478 479 8.868522 TCTTTTCATCCAAATATATAGGCCTG 57.131 34.615 17.99 0.00 0.00 4.85
489 490 9.927668 ATTTTCGTGTATTCTTTTCATCCAAAT 57.072 25.926 0.00 0.00 0.00 2.32
490 491 9.190858 CATTTTCGTGTATTCTTTTCATCCAAA 57.809 29.630 0.00 0.00 0.00 3.28
491 492 8.572185 TCATTTTCGTGTATTCTTTTCATCCAA 58.428 29.630 0.00 0.00 0.00 3.53
492 493 8.105097 TCATTTTCGTGTATTCTTTTCATCCA 57.895 30.769 0.00 0.00 0.00 3.41
493 494 8.237267 ACTCATTTTCGTGTATTCTTTTCATCC 58.763 33.333 0.00 0.00 0.00 3.51
494 495 9.612620 AACTCATTTTCGTGTATTCTTTTCATC 57.387 29.630 0.00 0.00 0.00 2.92
505 506 8.978539 GCATCTATCATAACTCATTTTCGTGTA 58.021 33.333 0.00 0.00 0.00 2.90
506 507 7.712639 AGCATCTATCATAACTCATTTTCGTGT 59.287 33.333 0.00 0.00 0.00 4.49
507 508 8.081208 AGCATCTATCATAACTCATTTTCGTG 57.919 34.615 0.00 0.00 0.00 4.35
508 509 7.386299 GGAGCATCTATCATAACTCATTTTCGT 59.614 37.037 0.00 0.00 33.73 3.85
509 510 7.148507 GGGAGCATCTATCATAACTCATTTTCG 60.149 40.741 0.00 0.00 33.73 3.46
510 511 7.663081 TGGGAGCATCTATCATAACTCATTTTC 59.337 37.037 0.00 0.00 33.73 2.29
511 512 7.520798 TGGGAGCATCTATCATAACTCATTTT 58.479 34.615 0.00 0.00 33.73 1.82
512 513 7.083062 TGGGAGCATCTATCATAACTCATTT 57.917 36.000 0.00 0.00 33.73 2.32
513 514 6.296317 CCTGGGAGCATCTATCATAACTCATT 60.296 42.308 0.00 0.00 33.73 2.57
514 515 5.189342 CCTGGGAGCATCTATCATAACTCAT 59.811 44.000 0.00 0.00 33.73 2.90
515 516 4.529769 CCTGGGAGCATCTATCATAACTCA 59.470 45.833 0.00 0.00 33.73 3.41
516 517 4.622695 GCCTGGGAGCATCTATCATAACTC 60.623 50.000 0.00 0.00 33.73 3.01
517 518 3.262915 GCCTGGGAGCATCTATCATAACT 59.737 47.826 0.00 0.00 33.73 2.24
518 519 3.604582 GCCTGGGAGCATCTATCATAAC 58.395 50.000 0.00 0.00 33.73 1.89
519 520 2.234661 CGCCTGGGAGCATCTATCATAA 59.765 50.000 0.00 0.00 33.73 1.90
520 521 1.827344 CGCCTGGGAGCATCTATCATA 59.173 52.381 0.00 0.00 33.73 2.15
521 522 0.612229 CGCCTGGGAGCATCTATCAT 59.388 55.000 0.00 0.00 33.73 2.45
522 523 2.052779 CGCCTGGGAGCATCTATCA 58.947 57.895 0.00 0.00 33.73 2.15
523 524 1.375268 GCGCCTGGGAGCATCTATC 60.375 63.158 10.33 0.00 40.60 2.08
524 525 2.746359 GCGCCTGGGAGCATCTAT 59.254 61.111 10.33 0.00 40.60 1.98
525 526 3.550431 GGCGCCTGGGAGCATCTA 61.550 66.667 22.15 0.00 42.66 1.98
527 528 4.496336 AAGGCGCCTGGGAGCATC 62.496 66.667 33.60 0.00 42.66 3.91
528 529 4.809496 CAAGGCGCCTGGGAGCAT 62.809 66.667 33.60 9.77 42.66 3.79
540 541 2.338620 GGAAACGGCAACCAAGGC 59.661 61.111 0.00 0.00 0.00 4.35
541 542 2.914908 CGGGAAACGGCAACCAAGG 61.915 63.158 0.00 0.00 39.42 3.61
542 543 1.894756 TCGGGAAACGGCAACCAAG 60.895 57.895 0.00 0.00 44.45 3.61
543 544 2.192443 TCGGGAAACGGCAACCAA 59.808 55.556 0.00 0.00 44.45 3.67
549 550 4.368543 ACCTCGTCGGGAAACGGC 62.369 66.667 0.00 0.00 45.50 5.68
550 551 2.126189 GACCTCGTCGGGAAACGG 60.126 66.667 0.00 0.00 42.80 4.44
559 560 1.586564 CGAATGCTCCGACCTCGTC 60.587 63.158 0.00 0.00 37.74 4.20
560 561 2.341101 ACGAATGCTCCGACCTCGT 61.341 57.895 0.00 0.00 37.88 4.18
561 562 1.874019 CACGAATGCTCCGACCTCG 60.874 63.158 0.00 0.00 39.44 4.63
562 563 1.519455 CCACGAATGCTCCGACCTC 60.519 63.158 0.00 0.00 0.00 3.85
563 564 2.579201 CCACGAATGCTCCGACCT 59.421 61.111 0.00 0.00 0.00 3.85
564 565 2.511600 CCCACGAATGCTCCGACC 60.512 66.667 0.00 0.00 0.00 4.79
565 566 3.195698 GCCCACGAATGCTCCGAC 61.196 66.667 0.00 0.00 0.00 4.79
566 567 4.812476 CGCCCACGAATGCTCCGA 62.812 66.667 0.00 0.00 43.93 4.55
576 577 1.794701 CAATATGACATCTCGCCCACG 59.205 52.381 0.00 0.00 42.01 4.94
577 578 2.146342 CCAATATGACATCTCGCCCAC 58.854 52.381 0.00 0.00 0.00 4.61
578 579 1.543208 GCCAATATGACATCTCGCCCA 60.543 52.381 0.00 0.00 0.00 5.36
579 580 1.160137 GCCAATATGACATCTCGCCC 58.840 55.000 0.00 0.00 0.00 6.13
580 581 1.882912 TGCCAATATGACATCTCGCC 58.117 50.000 0.00 0.00 0.00 5.54
581 582 2.225019 CCTTGCCAATATGACATCTCGC 59.775 50.000 0.00 0.00 0.00 5.03
582 583 3.732212 TCCTTGCCAATATGACATCTCG 58.268 45.455 0.00 0.00 0.00 4.04
583 584 4.754114 GTCTCCTTGCCAATATGACATCTC 59.246 45.833 0.00 0.00 0.00 2.75
584 585 4.164796 TGTCTCCTTGCCAATATGACATCT 59.835 41.667 0.00 0.00 0.00 2.90
585 586 4.454678 TGTCTCCTTGCCAATATGACATC 58.545 43.478 0.00 0.00 0.00 3.06
586 587 4.508551 TGTCTCCTTGCCAATATGACAT 57.491 40.909 0.00 0.00 0.00 3.06
587 588 3.998913 TGTCTCCTTGCCAATATGACA 57.001 42.857 0.00 0.00 0.00 3.58
588 589 3.004106 GCATGTCTCCTTGCCAATATGAC 59.996 47.826 0.00 0.00 36.12 3.06
589 590 3.216800 GCATGTCTCCTTGCCAATATGA 58.783 45.455 0.00 0.00 36.12 2.15
590 591 2.953648 TGCATGTCTCCTTGCCAATATG 59.046 45.455 0.00 0.00 40.15 1.78
591 592 3.301794 TGCATGTCTCCTTGCCAATAT 57.698 42.857 0.00 0.00 40.15 1.28
592 593 2.804986 TGCATGTCTCCTTGCCAATA 57.195 45.000 0.00 0.00 40.15 1.90
593 594 1.754803 CATGCATGTCTCCTTGCCAAT 59.245 47.619 18.91 0.00 40.15 3.16
594 595 1.179152 CATGCATGTCTCCTTGCCAA 58.821 50.000 18.91 0.00 40.15 4.52
595 596 1.317431 GCATGCATGTCTCCTTGCCA 61.317 55.000 26.79 0.00 40.15 4.92
596 597 1.035932 AGCATGCATGTCTCCTTGCC 61.036 55.000 26.79 7.72 40.15 4.52
597 598 0.815734 AAGCATGCATGTCTCCTTGC 59.184 50.000 26.79 12.38 41.00 4.01
598 599 4.224715 CATAAGCATGCATGTCTCCTTG 57.775 45.455 26.79 16.61 0.00 3.61
613 614 0.819582 ACAGCCACCAATGCATAAGC 59.180 50.000 0.00 0.00 42.57 3.09
614 615 1.064505 CGACAGCCACCAATGCATAAG 59.935 52.381 0.00 0.00 0.00 1.73
615 616 1.093972 CGACAGCCACCAATGCATAA 58.906 50.000 0.00 0.00 0.00 1.90
616 617 0.747644 CCGACAGCCACCAATGCATA 60.748 55.000 0.00 0.00 0.00 3.14
617 618 2.048023 CCGACAGCCACCAATGCAT 61.048 57.895 0.00 0.00 0.00 3.96
618 619 2.672651 CCGACAGCCACCAATGCA 60.673 61.111 0.00 0.00 0.00 3.96
619 620 4.120331 GCCGACAGCCACCAATGC 62.120 66.667 0.00 0.00 34.35 3.56
620 621 2.360350 AGCCGACAGCCACCAATG 60.360 61.111 0.00 0.00 45.47 2.82
621 622 1.264749 TAGAGCCGACAGCCACCAAT 61.265 55.000 0.00 0.00 45.47 3.16
622 623 1.888436 CTAGAGCCGACAGCCACCAA 61.888 60.000 0.00 0.00 45.47 3.67
623 624 2.283604 TAGAGCCGACAGCCACCA 60.284 61.111 0.00 0.00 45.47 4.17
624 625 2.010582 CTCTAGAGCCGACAGCCACC 62.011 65.000 6.86 0.00 45.47 4.61
625 626 1.435515 CTCTAGAGCCGACAGCCAC 59.564 63.158 6.86 0.00 45.47 5.01
626 627 3.926003 CTCTAGAGCCGACAGCCA 58.074 61.111 6.86 0.00 45.47 4.75
636 637 2.351455 TCTGTCACTGTCGCTCTAGAG 58.649 52.381 15.85 15.85 0.00 2.43
637 638 2.474410 TCTGTCACTGTCGCTCTAGA 57.526 50.000 0.00 0.00 0.00 2.43
638 639 3.560902 TTTCTGTCACTGTCGCTCTAG 57.439 47.619 0.00 0.00 0.00 2.43
639 640 4.521130 ATTTTCTGTCACTGTCGCTCTA 57.479 40.909 0.00 0.00 0.00 2.43
640 641 2.890808 TTTTCTGTCACTGTCGCTCT 57.109 45.000 0.00 0.00 0.00 4.09
641 642 4.238514 ACTATTTTCTGTCACTGTCGCTC 58.761 43.478 0.00 0.00 0.00 5.03
642 643 4.258702 ACTATTTTCTGTCACTGTCGCT 57.741 40.909 0.00 0.00 0.00 4.93
643 644 6.462073 TTTACTATTTTCTGTCACTGTCGC 57.538 37.500 0.00 0.00 0.00 5.19
644 645 6.526222 GCTTTACTATTTTCTGTCACTGTCG 58.474 40.000 0.00 0.00 0.00 4.35
645 646 6.365247 TCGCTTTACTATTTTCTGTCACTGTC 59.635 38.462 0.00 0.00 0.00 3.51
646 647 6.145696 GTCGCTTTACTATTTTCTGTCACTGT 59.854 38.462 0.00 0.00 0.00 3.55
647 648 6.145534 TGTCGCTTTACTATTTTCTGTCACTG 59.854 38.462 0.00 0.00 0.00 3.66
648 649 6.220930 TGTCGCTTTACTATTTTCTGTCACT 58.779 36.000 0.00 0.00 0.00 3.41
649 650 6.462073 TGTCGCTTTACTATTTTCTGTCAC 57.538 37.500 0.00 0.00 0.00 3.67
650 651 6.649141 ACATGTCGCTTTACTATTTTCTGTCA 59.351 34.615 0.00 0.00 0.00 3.58
651 652 7.061752 ACATGTCGCTTTACTATTTTCTGTC 57.938 36.000 0.00 0.00 0.00 3.51
652 653 7.435068 AACATGTCGCTTTACTATTTTCTGT 57.565 32.000 0.00 0.00 0.00 3.41
653 654 8.728088 AAAACATGTCGCTTTACTATTTTCTG 57.272 30.769 0.00 0.00 0.00 3.02
654 655 9.394477 GAAAAACATGTCGCTTTACTATTTTCT 57.606 29.630 13.75 0.00 32.92 2.52
655 656 9.394477 AGAAAAACATGTCGCTTTACTATTTTC 57.606 29.630 13.38 13.38 34.78 2.29
656 657 9.744468 AAGAAAAACATGTCGCTTTACTATTTT 57.256 25.926 0.00 0.00 0.00 1.82
657 658 9.744468 AAAGAAAAACATGTCGCTTTACTATTT 57.256 25.926 0.00 0.00 0.00 1.40
658 659 9.180678 CAAAGAAAAACATGTCGCTTTACTATT 57.819 29.630 0.00 0.00 0.00 1.73
659 660 8.349983 ACAAAGAAAAACATGTCGCTTTACTAT 58.650 29.630 0.00 0.00 0.00 2.12
660 661 7.699566 ACAAAGAAAAACATGTCGCTTTACTA 58.300 30.769 0.00 0.00 0.00 1.82
661 662 6.560711 ACAAAGAAAAACATGTCGCTTTACT 58.439 32.000 0.00 0.00 0.00 2.24
662 663 6.806120 ACAAAGAAAAACATGTCGCTTTAC 57.194 33.333 0.00 0.00 0.00 2.01
663 664 7.820044 AAACAAAGAAAAACATGTCGCTTTA 57.180 28.000 0.00 0.00 0.00 1.85
664 665 6.720012 AAACAAAGAAAAACATGTCGCTTT 57.280 29.167 0.00 4.24 0.00 3.51
665 666 6.720012 AAAACAAAGAAAAACATGTCGCTT 57.280 29.167 0.00 0.00 0.00 4.68
666 667 6.720012 AAAAACAAAGAAAAACATGTCGCT 57.280 29.167 0.00 0.00 0.00 4.93
691 692 0.393673 CCGCCCATATTCCACACACA 60.394 55.000 0.00 0.00 0.00 3.72
696 697 0.106918 TGTTCCCGCCCATATTCCAC 60.107 55.000 0.00 0.00 0.00 4.02
733 734 1.097232 TTGATTGATCTGCTTGCCCG 58.903 50.000 0.00 0.00 0.00 6.13
734 735 3.056322 AGTTTTGATTGATCTGCTTGCCC 60.056 43.478 0.00 0.00 0.00 5.36
754 755 9.798994 CGAAAAAGGTATGTACTCTTATGTAGT 57.201 33.333 0.00 0.00 0.00 2.73
755 756 9.798994 ACGAAAAAGGTATGTACTCTTATGTAG 57.201 33.333 0.00 0.00 0.00 2.74
756 757 9.793252 GACGAAAAAGGTATGTACTCTTATGTA 57.207 33.333 0.00 0.00 0.00 2.29
757 758 8.529476 AGACGAAAAAGGTATGTACTCTTATGT 58.471 33.333 0.00 0.00 0.00 2.29
758 759 8.928270 AGACGAAAAAGGTATGTACTCTTATG 57.072 34.615 0.00 0.00 0.00 1.90
759 760 9.583765 GAAGACGAAAAAGGTATGTACTCTTAT 57.416 33.333 0.00 0.00 0.00 1.73
760 761 8.800332 AGAAGACGAAAAAGGTATGTACTCTTA 58.200 33.333 0.00 0.00 0.00 2.10
766 767 6.150976 TCGGTAGAAGACGAAAAAGGTATGTA 59.849 38.462 0.00 0.00 36.01 2.29
768 769 5.404946 TCGGTAGAAGACGAAAAAGGTATG 58.595 41.667 0.00 0.00 36.01 2.39
774 775 3.057033 CCCTCTCGGTAGAAGACGAAAAA 60.057 47.826 0.00 0.00 38.79 1.94
807 808 2.322161 CATTGCCAACGAGCTTCAAAG 58.678 47.619 0.00 0.00 0.00 2.77
926 945 7.966753 GCAGACGAACTTCGGAACATATATATA 59.033 37.037 15.42 0.00 45.59 0.86
927 946 6.807230 GCAGACGAACTTCGGAACATATATAT 59.193 38.462 15.42 0.00 45.59 0.86
928 947 6.147581 GCAGACGAACTTCGGAACATATATA 58.852 40.000 15.42 0.00 45.59 0.86
929 948 4.982916 GCAGACGAACTTCGGAACATATAT 59.017 41.667 15.42 0.00 45.59 0.86
935 954 0.784778 CTGCAGACGAACTTCGGAAC 59.215 55.000 8.42 6.65 45.59 3.62
1008 1042 2.813908 GCCACGACTACGGCCAAG 60.814 66.667 2.24 1.22 42.82 3.61
1044 1084 0.186873 GGAGGTGGATGGCAATGGAT 59.813 55.000 0.00 0.00 0.00 3.41
1191 1238 0.820891 GCCCGTACCTGTCGATCCTA 60.821 60.000 0.00 0.00 0.00 2.94
1407 1454 1.817099 CTTGAGCATGTCCGGCCTC 60.817 63.158 0.00 0.00 0.00 4.70
1957 2022 3.412386 ACTAATGGTTCTGGTTCACTGC 58.588 45.455 0.00 0.00 0.00 4.40
1996 3804 0.724549 GTTGCCGATTGTCGTGCATA 59.275 50.000 13.37 5.56 42.37 3.14
2000 3808 0.586319 ACTTGTTGCCGATTGTCGTG 59.414 50.000 0.00 0.00 38.40 4.35
2032 3858 2.196776 CATCATGACCCTGGGCCC 59.803 66.667 17.59 17.59 0.00 5.80
2264 4109 1.271163 TGCTAGGCGGCAAAAGTTAGT 60.271 47.619 13.08 0.00 39.43 2.24
2277 4146 1.651987 TGCTACGAATTGTGCTAGGC 58.348 50.000 0.00 0.00 0.00 3.93
2291 4160 3.259064 TGATGCTTTCTACGGTTGCTAC 58.741 45.455 0.00 0.00 0.00 3.58
2294 4163 1.202076 GCTGATGCTTTCTACGGTTGC 60.202 52.381 0.00 0.00 36.03 4.17
2295 4164 2.076100 TGCTGATGCTTTCTACGGTTG 58.924 47.619 0.00 0.00 40.48 3.77
2296 4165 2.472695 TGCTGATGCTTTCTACGGTT 57.527 45.000 0.00 0.00 40.48 4.44
2297 4166 2.076863 GTTGCTGATGCTTTCTACGGT 58.923 47.619 0.00 0.00 40.48 4.83
2298 4167 2.350522 AGTTGCTGATGCTTTCTACGG 58.649 47.619 0.00 0.00 40.48 4.02
2320 4189 2.025981 ACATCAGGTTTATGAGCAGGCA 60.026 45.455 0.00 0.00 31.44 4.75
2321 4190 2.648059 ACATCAGGTTTATGAGCAGGC 58.352 47.619 0.00 0.00 31.44 4.85
2322 4191 7.716998 ACTTATTACATCAGGTTTATGAGCAGG 59.283 37.037 0.00 0.00 31.44 4.85
2323 4192 8.668510 ACTTATTACATCAGGTTTATGAGCAG 57.331 34.615 0.00 0.00 31.44 4.24
2383 4271 1.086067 AGATGCTCGCGTTCATGTGG 61.086 55.000 17.53 0.00 0.00 4.17
2390 4278 0.037326 TCCTGAAAGATGCTCGCGTT 60.037 50.000 5.77 0.00 34.07 4.84
2404 4292 1.671742 GAACTTGGTCGGCTCCTGA 59.328 57.895 0.00 0.00 0.00 3.86
2663 4560 3.019564 GGTTTGGTCATGATCAAGGAGG 58.980 50.000 20.21 0.00 32.35 4.30
2713 4623 1.272369 TGCAATGCTGTAATGGGACCA 60.272 47.619 6.82 0.00 0.00 4.02
2820 4767 4.096833 GCTGACATGAAAAGCCATGATACA 59.903 41.667 10.42 6.85 44.98 2.29
2835 4782 7.118825 CCTGAAACATAGTATATGGCTGACATG 59.881 40.741 6.18 0.00 40.82 3.21
2836 4783 7.016563 TCCTGAAACATAGTATATGGCTGACAT 59.983 37.037 0.00 0.00 43.68 3.06
2913 4864 6.149633 CCCAAATAGTAACTGTGAAGCAAAC 58.850 40.000 0.00 0.00 0.00 2.93
2953 4904 3.055819 TCTTCTGGTGTAGATGTTGCCTC 60.056 47.826 0.00 0.00 34.80 4.70
2994 4945 2.601666 AGTGCCGAGTGAGCCTGA 60.602 61.111 0.00 0.00 0.00 3.86
3030 4981 4.331968 ACAAGATATCAAACGGAGGCAAA 58.668 39.130 5.32 0.00 0.00 3.68
3087 5038 8.396272 AGTGCACTTGTACTGATATTCTTTTT 57.604 30.769 15.25 0.00 39.51 1.94
3088 5039 7.986085 AGTGCACTTGTACTGATATTCTTTT 57.014 32.000 15.25 0.00 39.51 2.27
3099 5050 2.752354 TGTTTTGCAGTGCACTTGTACT 59.248 40.909 19.58 0.00 41.69 2.73
3100 5051 3.143807 TGTTTTGCAGTGCACTTGTAC 57.856 42.857 19.58 11.47 38.71 2.90
3101 5052 3.857549 TTGTTTTGCAGTGCACTTGTA 57.142 38.095 19.58 9.73 38.71 2.41
3102 5053 2.739885 TTGTTTTGCAGTGCACTTGT 57.260 40.000 19.58 0.00 38.71 3.16
3148 5099 5.628193 TCTTAGAACATTTCTCGTCGTCAAC 59.372 40.000 0.00 0.00 41.14 3.18
3149 5100 5.765176 TCTTAGAACATTTCTCGTCGTCAA 58.235 37.500 0.00 0.00 41.14 3.18
3172 5123 1.428912 TCTTGCCTTTTGGTCCCTGAT 59.571 47.619 0.00 0.00 42.99 2.90
3173 5124 0.850100 TCTTGCCTTTTGGTCCCTGA 59.150 50.000 0.00 0.00 42.99 3.86
3237 5188 1.214175 TGCACCTCTTTTTCTGGACCA 59.786 47.619 0.00 0.00 0.00 4.02
3246 5197 6.929049 GGCTACTTTTTAAATGCACCTCTTTT 59.071 34.615 0.00 0.00 0.00 2.27
3252 5203 3.513912 AGGGGCTACTTTTTAAATGCACC 59.486 43.478 0.00 0.00 43.65 5.01
3269 5220 4.112634 GCGAATTGATTCTTTTTAGGGGC 58.887 43.478 2.58 0.00 34.69 5.80
3284 5235 3.303066 CCCACATGTACGTATGCGAATTG 60.303 47.826 11.07 4.59 42.00 2.32
3290 5241 4.628074 AGTATTCCCACATGTACGTATGC 58.372 43.478 0.00 0.00 0.00 3.14
3336 5287 6.564557 AGGATGCCAATGGACATAATTTTT 57.435 33.333 2.05 0.00 0.00 1.94
3506 5465 4.728772 AGAATGGTTGATCAGGTTTGACA 58.271 39.130 0.00 0.00 35.83 3.58
3507 5466 5.940470 AGTAGAATGGTTGATCAGGTTTGAC 59.060 40.000 0.00 0.00 35.83 3.18
3513 5472 3.455910 TGGGAGTAGAATGGTTGATCAGG 59.544 47.826 0.00 0.00 0.00 3.86
3520 5479 4.289672 ACTTCACATGGGAGTAGAATGGTT 59.710 41.667 3.62 0.00 0.00 3.67
3523 5482 5.063944 CGAAACTTCACATGGGAGTAGAATG 59.936 44.000 3.62 0.00 0.00 2.67
3535 5494 6.430451 GTCATTTCTTCACGAAACTTCACAT 58.570 36.000 0.00 0.00 43.90 3.21
3536 5495 5.501736 CGTCATTTCTTCACGAAACTTCACA 60.502 40.000 0.00 0.00 43.90 3.58
3537 5496 4.898488 CGTCATTTCTTCACGAAACTTCAC 59.102 41.667 0.00 0.00 43.90 3.18
3547 5506 3.074412 ACCATGGACGTCATTTCTTCAC 58.926 45.455 21.47 0.00 32.92 3.18
3552 5511 6.189677 TGAAAATACCATGGACGTCATTTC 57.810 37.500 21.47 17.79 32.92 2.17
3599 5558 9.965824 ACGATTCATTCAAACAGTTTCTTTTAT 57.034 25.926 0.00 0.00 0.00 1.40
3601 5560 9.965824 ATACGATTCATTCAAACAGTTTCTTTT 57.034 25.926 0.00 0.00 0.00 2.27
3605 5564 7.214449 CGACATACGATTCATTCAAACAGTTTC 59.786 37.037 0.00 0.00 45.77 2.78
3627 5586 5.209818 AGTGAAGAAAATACAGTCCGACA 57.790 39.130 0.40 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.