Multiple sequence alignment - TraesCS2A01G220400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G220400 chr2A 100.000 4295 0 0 1 4295 208108253 208112547 0.000000e+00 7932.0
1 TraesCS2A01G220400 chr2B 91.130 2300 101 43 797 3047 250065323 250067568 0.000000e+00 3022.0
2 TraesCS2A01G220400 chr2B 90.022 461 29 10 3045 3492 250068373 250068829 8.010000e-162 580.0
3 TraesCS2A01G220400 chr2B 85.214 257 15 10 3669 3917 250069129 250069370 4.290000e-60 243.0
4 TraesCS2A01G220400 chr2B 95.270 148 7 0 3542 3689 250068961 250069108 7.180000e-58 235.0
5 TraesCS2A01G220400 chr2D 91.645 1520 66 28 2206 3686 194188843 194190340 0.000000e+00 2047.0
6 TraesCS2A01G220400 chr2D 92.488 1411 61 23 793 2181 194187383 194188770 0.000000e+00 1977.0
7 TraesCS2A01G220400 chr2D 91.684 469 30 2 108 567 194186005 194186473 3.620000e-180 641.0
8 TraesCS2A01G220400 chr2D 89.121 239 13 4 3682 3917 194190595 194190823 7.030000e-73 285.0
9 TraesCS2A01G220400 chr2D 83.333 318 38 9 808 1117 194183207 194183517 3.270000e-71 279.0
10 TraesCS2A01G220400 chr2D 96.429 56 2 0 26 81 194185947 194186002 4.570000e-15 93.5
11 TraesCS2A01G220400 chr2D 96.875 32 1 0 3926 3957 315187725 315187694 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G220400 chr2A 208108253 208112547 4294 False 7932.000000 7932 100.000000 1 4295 1 chr2A.!!$F1 4294
1 TraesCS2A01G220400 chr2B 250065323 250069370 4047 False 1020.000000 3022 90.409000 797 3917 4 chr2B.!!$F1 3120
2 TraesCS2A01G220400 chr2D 194183207 194190823 7616 False 887.083333 2047 90.783333 26 3917 6 chr2D.!!$F1 3891

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
526 3251 0.179171 ACGAATAGGCGTGTCGACAG 60.179 55.0 20.73 14.06 43.79 3.51 F
1009 4437 0.035056 CTCCCCCTTCACCATCACAC 60.035 60.0 0.00 0.00 0.00 3.82 F
2000 5433 0.534412 CCTCCAGCAGACACCACTAG 59.466 60.0 0.00 0.00 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1618 5046 0.407139 AGATTGGCAAGAACAGGGCT 59.593 50.0 5.96 0.0 0.0 5.19 R
2953 6456 0.242017 ACGTACGTGGTGAGGTAAGC 59.758 55.0 22.14 0.0 0.0 3.09 R
3643 8089 0.179067 AGGCACCGAAAGAAACGTCA 60.179 50.0 0.00 0.0 0.0 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.546428 CTTTCTCTTTCTCTTTCTCTTTCTCTT 57.454 33.333 0.00 0.00 0.00 2.85
28 29 9.898152 TTTCTCTTTCTCTTTCTCTTTCTCTTT 57.102 29.630 0.00 0.00 0.00 2.52
29 30 9.541143 TTCTCTTTCTCTTTCTCTTTCTCTTTC 57.459 33.333 0.00 0.00 0.00 2.62
30 31 8.923270 TCTCTTTCTCTTTCTCTTTCTCTTTCT 58.077 33.333 0.00 0.00 0.00 2.52
32 33 8.923270 TCTTTCTCTTTCTCTTTCTCTTTCTCT 58.077 33.333 0.00 0.00 0.00 3.10
33 34 9.546428 CTTTCTCTTTCTCTTTCTCTTTCTCTT 57.454 33.333 0.00 0.00 0.00 2.85
34 35 9.541143 TTTCTCTTTCTCTTTCTCTTTCTCTTC 57.459 33.333 0.00 0.00 0.00 2.87
76 2792 9.847224 ATTTATTCCGAGTGGTAGATAAATTGT 57.153 29.630 0.00 0.00 35.41 2.71
78 2794 9.754382 TTATTCCGAGTGGTAGATAAATTGTAC 57.246 33.333 0.00 0.00 36.30 2.90
79 2795 6.778834 TCCGAGTGGTAGATAAATTGTACA 57.221 37.500 0.00 0.00 36.30 2.90
80 2796 7.172868 TCCGAGTGGTAGATAAATTGTACAA 57.827 36.000 11.41 11.41 36.30 2.41
81 2797 7.788026 TCCGAGTGGTAGATAAATTGTACAAT 58.212 34.615 15.47 15.47 36.30 2.71
82 2798 8.262227 TCCGAGTGGTAGATAAATTGTACAATT 58.738 33.333 24.88 24.88 38.37 2.32
83 2799 8.335356 CCGAGTGGTAGATAAATTGTACAATTG 58.665 37.037 29.54 14.55 40.57 2.32
84 2800 8.335356 CGAGTGGTAGATAAATTGTACAATTGG 58.665 37.037 29.54 5.55 40.57 3.16
85 2801 8.519799 AGTGGTAGATAAATTGTACAATTGGG 57.480 34.615 29.54 0.00 40.57 4.12
86 2802 8.333235 AGTGGTAGATAAATTGTACAATTGGGA 58.667 33.333 29.54 19.62 40.57 4.37
87 2803 9.131791 GTGGTAGATAAATTGTACAATTGGGAT 57.868 33.333 29.54 22.62 40.57 3.85
88 2804 9.707957 TGGTAGATAAATTGTACAATTGGGATT 57.292 29.630 29.54 18.05 40.57 3.01
95 2811 8.947055 AAATTGTACAATTGGGATTATCTTGC 57.053 30.769 29.54 0.00 40.57 4.01
96 2812 7.658525 ATTGTACAATTGGGATTATCTTGCA 57.341 32.000 15.47 0.00 0.00 4.08
97 2813 6.698008 TGTACAATTGGGATTATCTTGCAG 57.302 37.500 10.83 0.00 0.00 4.41
98 2814 5.593909 TGTACAATTGGGATTATCTTGCAGG 59.406 40.000 10.83 0.00 0.00 4.85
123 2839 5.766150 ACCGATCACTGAAATGAACAAAA 57.234 34.783 0.00 0.00 30.82 2.44
132 2848 8.655092 TCACTGAAATGAACAAAAACACAATTC 58.345 29.630 0.00 0.00 0.00 2.17
168 2884 4.381411 GGCTAAGTAGGCGAAAATGAGAT 58.619 43.478 0.00 0.00 39.15 2.75
172 2888 3.971150 AGTAGGCGAAAATGAGATCTCG 58.029 45.455 17.76 6.82 0.00 4.04
209 2926 1.250328 TCTTGCCATTTCAGTGCCAG 58.750 50.000 0.00 0.00 0.00 4.85
217 2934 3.460103 CATTTCAGTGCCAGCTTTTTGT 58.540 40.909 0.00 0.00 0.00 2.83
295 3012 3.202906 GCATACTTCATTGACCGGCTAA 58.797 45.455 0.00 0.00 0.00 3.09
304 3021 1.291272 GACCGGCTAACGTCCAAGT 59.709 57.895 0.00 0.00 42.24 3.16
364 3081 9.579768 AATTCATGTGCGATAATACTATCTCTC 57.420 33.333 0.00 0.00 33.03 3.20
367 3084 8.454894 TCATGTGCGATAATACTATCTCTCTTC 58.545 37.037 0.00 0.00 33.03 2.87
416 3141 9.444600 GAAACAAATGGAGTACTTTATAGTGGA 57.555 33.333 0.00 0.00 35.78 4.02
448 3173 6.842163 ACTAACAATTCCAAGCGAGTAATTG 58.158 36.000 12.86 12.86 42.37 2.32
464 3189 6.037172 CGAGTAATTGTCCAAGGTATCAAAGG 59.963 42.308 0.00 0.00 0.00 3.11
476 3201 8.480501 CCAAGGTATCAAAGGATCATGAAATTT 58.519 33.333 0.00 0.00 34.89 1.82
526 3251 0.179171 ACGAATAGGCGTGTCGACAG 60.179 55.000 20.73 14.06 43.79 3.51
539 3264 4.030641 CGTGTCGACAGTTATGAACATGAG 59.969 45.833 20.73 0.00 31.53 2.90
540 3265 5.161358 GTGTCGACAGTTATGAACATGAGA 58.839 41.667 20.73 0.00 0.00 3.27
550 3275 9.712359 CAGTTATGAACATGAGATGTAATTGTG 57.288 33.333 0.00 0.00 44.07 3.33
572 3297 8.883954 TGTGTATTGAAATTCAATTTGCAAGA 57.116 26.923 23.98 4.15 44.03 3.02
573 3298 8.980610 TGTGTATTGAAATTCAATTTGCAAGAG 58.019 29.630 23.98 0.00 44.03 2.85
574 3299 8.437742 GTGTATTGAAATTCAATTTGCAAGAGG 58.562 33.333 23.98 0.00 44.03 3.69
578 3303 7.661127 TGAAATTCAATTTGCAAGAGGAATG 57.339 32.000 16.98 1.12 31.47 2.67
579 3304 6.148150 TGAAATTCAATTTGCAAGAGGAATGC 59.852 34.615 16.98 13.76 44.08 3.56
580 3305 3.598019 TCAATTTGCAAGAGGAATGCC 57.402 42.857 0.00 0.00 43.16 4.40
581 3306 2.234414 TCAATTTGCAAGAGGAATGCCC 59.766 45.455 0.00 0.00 43.16 5.36
597 3322 2.379972 TGCCCTCTAGCAAGTACTCTC 58.620 52.381 0.00 0.00 40.56 3.20
599 3324 2.621526 GCCCTCTAGCAAGTACTCTCTC 59.378 54.545 0.00 0.00 0.00 3.20
602 3327 3.315191 CCTCTAGCAAGTACTCTCTCTGC 59.685 52.174 8.18 8.18 0.00 4.26
604 3329 2.230130 AGCAAGTACTCTCTCTGCCT 57.770 50.000 11.89 0.00 0.00 4.75
605 3330 2.099405 AGCAAGTACTCTCTCTGCCTC 58.901 52.381 11.89 0.00 0.00 4.70
606 3331 1.821753 GCAAGTACTCTCTCTGCCTCA 59.178 52.381 5.35 0.00 0.00 3.86
607 3332 2.232452 GCAAGTACTCTCTCTGCCTCAA 59.768 50.000 5.35 0.00 0.00 3.02
608 3333 3.306364 GCAAGTACTCTCTCTGCCTCAAA 60.306 47.826 5.35 0.00 0.00 2.69
609 3334 4.241681 CAAGTACTCTCTCTGCCTCAAAC 58.758 47.826 0.00 0.00 0.00 2.93
611 3336 3.898123 AGTACTCTCTCTGCCTCAAACAA 59.102 43.478 0.00 0.00 0.00 2.83
613 3338 4.156455 ACTCTCTCTGCCTCAAACAAAA 57.844 40.909 0.00 0.00 0.00 2.44
614 3339 4.723309 ACTCTCTCTGCCTCAAACAAAAT 58.277 39.130 0.00 0.00 0.00 1.82
616 3341 4.464008 TCTCTCTGCCTCAAACAAAATGT 58.536 39.130 0.00 0.00 0.00 2.71
617 3342 5.620206 TCTCTCTGCCTCAAACAAAATGTA 58.380 37.500 0.00 0.00 0.00 2.29
618 3343 6.061441 TCTCTCTGCCTCAAACAAAATGTAA 58.939 36.000 0.00 0.00 0.00 2.41
620 3345 6.061441 TCTCTGCCTCAAACAAAATGTAAGA 58.939 36.000 0.00 0.00 0.00 2.10
621 3346 6.017109 TCTCTGCCTCAAACAAAATGTAAGAC 60.017 38.462 0.00 0.00 0.00 3.01
622 3347 5.827797 TCTGCCTCAAACAAAATGTAAGACT 59.172 36.000 0.00 0.00 0.00 3.24
623 3348 6.995686 TCTGCCTCAAACAAAATGTAAGACTA 59.004 34.615 0.00 0.00 0.00 2.59
624 3349 7.665559 TCTGCCTCAAACAAAATGTAAGACTAT 59.334 33.333 0.00 0.00 0.00 2.12
625 3350 8.177119 TGCCTCAAACAAAATGTAAGACTATT 57.823 30.769 0.00 0.00 0.00 1.73
626 3351 8.637986 TGCCTCAAACAAAATGTAAGACTATTT 58.362 29.630 0.00 0.00 0.00 1.40
627 3352 9.476202 GCCTCAAACAAAATGTAAGACTATTTT 57.524 29.630 0.00 0.00 37.06 1.82
660 3385 4.058124 TGTCTTTCATTTCGAGACAGTGG 58.942 43.478 1.60 0.00 43.38 4.00
661 3386 3.433615 GTCTTTCATTTCGAGACAGTGGG 59.566 47.826 0.00 0.00 39.59 4.61
662 3387 2.472695 TTCATTTCGAGACAGTGGGG 57.527 50.000 0.00 0.00 0.00 4.96
663 3388 0.613260 TCATTTCGAGACAGTGGGGG 59.387 55.000 0.00 0.00 0.00 5.40
664 3389 0.324943 CATTTCGAGACAGTGGGGGT 59.675 55.000 0.00 0.00 0.00 4.95
665 3390 1.553248 CATTTCGAGACAGTGGGGGTA 59.447 52.381 0.00 0.00 0.00 3.69
666 3391 1.946984 TTTCGAGACAGTGGGGGTAT 58.053 50.000 0.00 0.00 0.00 2.73
667 3392 2.832643 TTCGAGACAGTGGGGGTATA 57.167 50.000 0.00 0.00 0.00 1.47
668 3393 3.323774 TTCGAGACAGTGGGGGTATAT 57.676 47.619 0.00 0.00 0.00 0.86
670 3395 3.759581 TCGAGACAGTGGGGGTATATAC 58.240 50.000 4.14 4.14 0.00 1.47
671 3396 3.396946 TCGAGACAGTGGGGGTATATACT 59.603 47.826 12.54 0.00 0.00 2.12
672 3397 3.757493 CGAGACAGTGGGGGTATATACTC 59.243 52.174 12.54 8.56 0.00 2.59
675 3400 4.419200 AGACAGTGGGGGTATATACTCAGA 59.581 45.833 14.70 0.00 0.00 3.27
676 3401 5.076598 AGACAGTGGGGGTATATACTCAGAT 59.923 44.000 14.70 0.00 0.00 2.90
677 3402 5.087323 ACAGTGGGGGTATATACTCAGATG 58.913 45.833 14.70 9.36 0.00 2.90
678 3403 4.467795 CAGTGGGGGTATATACTCAGATGG 59.532 50.000 14.70 0.00 0.00 3.51
681 3406 6.021030 GTGGGGGTATATACTCAGATGGTTA 58.979 44.000 14.70 0.00 0.00 2.85
683 3408 5.424573 GGGGGTATATACTCAGATGGTTACC 59.575 48.000 14.70 0.00 0.00 2.85
684 3409 6.021030 GGGGTATATACTCAGATGGTTACCA 58.979 44.000 14.70 6.53 38.19 3.25
687 3412 9.263446 GGGTATATACTCAGATGGTTACCATTA 57.737 37.037 18.78 6.76 45.26 1.90
713 3885 9.752961 ATATAACCACAACTTAACAAAACCAAC 57.247 29.630 0.00 0.00 0.00 3.77
715 3887 6.043854 ACCACAACTTAACAAAACCAACAT 57.956 33.333 0.00 0.00 0.00 2.71
716 3888 7.171630 ACCACAACTTAACAAAACCAACATA 57.828 32.000 0.00 0.00 0.00 2.29
718 3890 7.708752 ACCACAACTTAACAAAACCAACATATG 59.291 33.333 0.00 0.00 0.00 1.78
747 3919 6.256912 TCCATAATCCAAACGTTGTAAACC 57.743 37.500 0.00 0.00 46.28 3.27
749 3921 6.149807 TCCATAATCCAAACGTTGTAAACCTC 59.850 38.462 0.00 0.00 46.28 3.85
750 3922 6.150474 CCATAATCCAAACGTTGTAAACCTCT 59.850 38.462 0.00 0.00 46.28 3.69
751 3923 7.308951 CCATAATCCAAACGTTGTAAACCTCTT 60.309 37.037 0.00 0.00 46.28 2.85
752 3924 6.459670 AATCCAAACGTTGTAAACCTCTTT 57.540 33.333 0.00 0.00 46.28 2.52
753 3925 7.571080 AATCCAAACGTTGTAAACCTCTTTA 57.429 32.000 0.00 0.00 46.28 1.85
754 3926 7.754851 ATCCAAACGTTGTAAACCTCTTTAT 57.245 32.000 0.00 0.00 46.28 1.40
755 3927 7.571080 TCCAAACGTTGTAAACCTCTTTATT 57.429 32.000 0.00 0.00 46.28 1.40
757 3929 7.282675 TCCAAACGTTGTAAACCTCTTTATTGA 59.717 33.333 0.00 0.00 46.28 2.57
758 3930 8.079809 CCAAACGTTGTAAACCTCTTTATTGAT 58.920 33.333 0.00 0.00 46.28 2.57
804 3976 9.967346 ATCTTTAAAGGTCAAAACTAAAAGAGC 57.033 29.630 15.13 0.00 35.43 4.09
833 4243 9.807649 AAAACAAGAATATGCACAAGATATTCC 57.192 29.630 11.59 0.00 41.08 3.01
835 4248 8.523915 ACAAGAATATGCACAAGATATTCCAA 57.476 30.769 11.59 0.00 41.08 3.53
836 4249 8.627403 ACAAGAATATGCACAAGATATTCCAAG 58.373 33.333 11.59 6.46 41.08 3.61
844 4257 5.049129 GCACAAGATATTCCAAGACCATAGC 60.049 44.000 0.00 0.00 0.00 2.97
845 4258 5.471456 CACAAGATATTCCAAGACCATAGCC 59.529 44.000 0.00 0.00 0.00 3.93
848 4261 4.665009 AGATATTCCAAGACCATAGCCCAA 59.335 41.667 0.00 0.00 0.00 4.12
853 4267 3.075283 TCCAAGACCATAGCCCAAGAAAA 59.925 43.478 0.00 0.00 0.00 2.29
877 4296 9.719355 AAAAAGGAATAAATTAGCGGAAAACAT 57.281 25.926 0.00 0.00 0.00 2.71
878 4297 8.926715 AAAGGAATAAATTAGCGGAAAACATC 57.073 30.769 0.00 0.00 0.00 3.06
882 4301 8.807581 GGAATAAATTAGCGGAAAACATCTTTG 58.192 33.333 0.00 0.00 0.00 2.77
883 4302 7.755582 ATAAATTAGCGGAAAACATCTTTGC 57.244 32.000 0.00 0.00 0.00 3.68
884 4303 4.782019 ATTAGCGGAAAACATCTTTGCA 57.218 36.364 0.00 0.00 0.00 4.08
885 4304 4.782019 TTAGCGGAAAACATCTTTGCAT 57.218 36.364 0.00 0.00 0.00 3.96
886 4305 2.950433 AGCGGAAAACATCTTTGCATG 58.050 42.857 0.00 0.00 0.00 4.06
888 4307 3.005684 AGCGGAAAACATCTTTGCATGAA 59.994 39.130 0.00 0.00 0.00 2.57
890 4309 3.674753 CGGAAAACATCTTTGCATGAACC 59.325 43.478 0.00 0.00 0.00 3.62
893 4312 5.702209 GGAAAACATCTTTGCATGAACCAAT 59.298 36.000 0.00 0.00 0.00 3.16
894 4313 6.347888 GGAAAACATCTTTGCATGAACCAATG 60.348 38.462 0.00 0.00 0.00 2.82
895 4314 4.196626 ACATCTTTGCATGAACCAATGG 57.803 40.909 0.00 0.00 0.00 3.16
896 4315 3.579586 ACATCTTTGCATGAACCAATGGT 59.420 39.130 0.00 0.00 37.65 3.55
918 4346 3.888930 TGAAACCAGTGGTGAAAAGATCC 59.111 43.478 17.56 0.00 35.34 3.36
919 4347 2.586648 ACCAGTGGTGAAAAGATCCC 57.413 50.000 15.86 0.00 32.98 3.85
920 4348 1.780309 ACCAGTGGTGAAAAGATCCCA 59.220 47.619 15.86 0.00 32.98 4.37
921 4349 2.224867 ACCAGTGGTGAAAAGATCCCAG 60.225 50.000 15.86 0.00 32.98 4.45
922 4350 2.440409 CAGTGGTGAAAAGATCCCAGG 58.560 52.381 0.00 0.00 31.52 4.45
931 4359 2.725221 AAGATCCCAGGATGAACTGC 57.275 50.000 3.29 0.00 39.69 4.40
985 4413 4.202577 CCCCATAAATACCTTCTTCCTCCC 60.203 50.000 0.00 0.00 0.00 4.30
998 4426 2.378522 CTCCCCCATCTCCCCCTT 59.621 66.667 0.00 0.00 0.00 3.95
1009 4437 0.035056 CTCCCCCTTCACCATCACAC 60.035 60.000 0.00 0.00 0.00 3.82
1055 4483 2.108976 ATCCGCATACCACCGCAG 59.891 61.111 0.00 0.00 0.00 5.18
1096 4524 3.771160 CACTAACCGCGCCTCCCT 61.771 66.667 0.00 0.00 0.00 4.20
1198 4626 1.920835 AAGCCTGTCCACCTCCCTC 60.921 63.158 0.00 0.00 0.00 4.30
1236 4664 2.123640 CGTCCCCTCTCCCTCTCC 60.124 72.222 0.00 0.00 0.00 3.71
1621 5049 4.432741 GTGGCCTCTTGGGGAGCC 62.433 72.222 3.32 0.00 40.57 4.70
1639 5067 1.089920 CCCTGTTCTTGCCAATCTCG 58.910 55.000 0.00 0.00 0.00 4.04
1680 5108 1.082561 GTGCTGATGCGTGTGTGTG 60.083 57.895 0.00 0.00 43.34 3.82
1681 5109 1.523484 TGCTGATGCGTGTGTGTGT 60.523 52.632 0.00 0.00 43.34 3.72
1682 5110 1.094650 TGCTGATGCGTGTGTGTGTT 61.095 50.000 0.00 0.00 43.34 3.32
1685 5113 1.282570 GATGCGTGTGTGTGTTGGG 59.717 57.895 0.00 0.00 0.00 4.12
1690 5118 1.599419 GCGTGTGTGTGTTGGGATTTC 60.599 52.381 0.00 0.00 0.00 2.17
1888 5317 0.563173 TCTCCCTCCTCCCGATCATT 59.437 55.000 0.00 0.00 0.00 2.57
1952 5381 8.937271 CAACATGATTGGTGAGCAATCTGCAA 62.937 42.308 30.06 15.73 43.67 4.08
1992 5422 3.691609 CCTTGAAATTACCTCCAGCAGAC 59.308 47.826 0.00 0.00 0.00 3.51
2000 5433 0.534412 CCTCCAGCAGACACCACTAG 59.466 60.000 0.00 0.00 0.00 2.57
2024 5457 7.920738 AGATAAGAAATATCGTCACTTTTGCC 58.079 34.615 0.00 0.00 44.37 4.52
2118 5555 9.557338 CTGAGGTCTATAATTTAGCACGTATAC 57.443 37.037 0.00 0.00 0.00 1.47
2127 5564 7.529880 AATTTAGCACGTATACTGTACCAAC 57.470 36.000 0.56 0.00 0.00 3.77
2146 5583 3.885484 ACAGCTTTGTCTTTGATGTCG 57.115 42.857 0.00 0.00 0.00 4.35
2209 5694 8.837099 TGAATGTATGGGGTTTAATTCTGATT 57.163 30.769 0.00 0.00 0.00 2.57
2514 6004 5.754782 TGTCATAAGTTCATAGCCACCATT 58.245 37.500 0.00 0.00 0.00 3.16
2576 6066 9.751542 AATGAACTTTGGAGACGAACTATATAG 57.248 33.333 8.27 8.27 0.00 1.31
2577 6067 7.201145 TGAACTTTGGAGACGAACTATATAGC 58.799 38.462 9.78 0.00 0.00 2.97
2578 6068 6.710597 ACTTTGGAGACGAACTATATAGCA 57.289 37.500 9.78 0.00 0.00 3.49
2579 6069 7.291411 ACTTTGGAGACGAACTATATAGCAT 57.709 36.000 9.78 0.00 0.00 3.79
2580 6070 8.405418 ACTTTGGAGACGAACTATATAGCATA 57.595 34.615 9.78 0.00 0.00 3.14
2581 6071 8.298140 ACTTTGGAGACGAACTATATAGCATAC 58.702 37.037 9.78 0.00 0.00 2.39
2582 6072 7.754851 TTGGAGACGAACTATATAGCATACA 57.245 36.000 9.78 0.00 0.00 2.29
2583 6073 7.939784 TGGAGACGAACTATATAGCATACAT 57.060 36.000 9.78 0.00 0.00 2.29
2584 6074 7.762382 TGGAGACGAACTATATAGCATACATG 58.238 38.462 9.78 0.00 0.00 3.21
2606 6096 4.906423 GCATATAGCAGCATAGCATTCAC 58.094 43.478 0.00 0.00 44.79 3.18
2640 6134 3.803778 GGCACAAGTTCATTCACAAAAGG 59.196 43.478 0.00 0.00 0.00 3.11
2642 6136 3.803778 CACAAGTTCATTCACAAAAGGCC 59.196 43.478 0.00 0.00 0.00 5.19
2650 6144 5.540911 TCATTCACAAAAGGCCAAGATTTC 58.459 37.500 5.01 0.00 0.00 2.17
2657 6151 2.100605 AGGCCAAGATTTCGACAGTC 57.899 50.000 5.01 0.00 0.00 3.51
2682 6176 9.295825 TCTGTGTGATAATTCAGTTGGTTAATT 57.704 29.630 0.00 0.00 30.85 1.40
2688 6182 9.689976 TGATAATTCAGTTGGTTAATTTGTGTG 57.310 29.630 0.00 0.00 0.00 3.82
2942 6445 1.615883 CTACTCCCAGGTGATCCATCG 59.384 57.143 0.00 0.00 35.89 3.84
2953 6456 1.202973 GATCCATCGCACACGTCTCG 61.203 60.000 0.00 0.00 41.18 4.04
2973 6476 1.468520 GCTTACCTCACCACGTACGTA 59.531 52.381 22.34 4.29 0.00 3.57
2974 6477 2.095263 GCTTACCTCACCACGTACGTAA 60.095 50.000 22.34 8.18 0.00 3.18
2975 6478 3.428045 GCTTACCTCACCACGTACGTAAT 60.428 47.826 22.34 9.29 0.00 1.89
2976 6479 2.642139 ACCTCACCACGTACGTAATG 57.358 50.000 22.34 20.80 0.00 1.90
3001 6511 4.129380 GGAAGCAAGCAAACCAGAATTTT 58.871 39.130 0.00 0.00 0.00 1.82
3047 6557 1.962807 TGTTGCAGGCAAAGCAGTAAT 59.037 42.857 8.47 0.00 43.75 1.89
3235 7575 0.536233 TTGTTCCGTGACCATGGTGG 60.536 55.000 25.52 18.03 45.02 4.61
3256 7596 4.777366 TGGTGATGATGTAGAGAGGTGAAA 59.223 41.667 0.00 0.00 0.00 2.69
3310 7650 1.290324 CCCCGATCTCCAGCATACG 59.710 63.158 0.00 0.00 0.00 3.06
3437 7780 1.596477 GATCTCTGCGATGGGTGCC 60.596 63.158 0.00 0.00 30.84 5.01
3464 7807 3.539842 CGTAGCTCCTCCTTCCCC 58.460 66.667 0.00 0.00 0.00 4.81
3505 7951 2.887152 CCTCTCTCTTGTTTGTTTGGGG 59.113 50.000 0.00 0.00 0.00 4.96
3535 7981 3.948719 TCCCCGGCTCGTTTTGCT 61.949 61.111 0.00 0.00 0.00 3.91
3550 7996 1.022451 TTGCTGAATACCCGGCGTTC 61.022 55.000 6.01 3.35 41.19 3.95
3643 8089 1.358152 TGGGTTTGGTCTTCGATCCT 58.642 50.000 0.00 0.00 0.00 3.24
3661 8107 0.234884 CTGACGTTTCTTTCGGTGCC 59.765 55.000 0.00 0.00 0.00 5.01
3758 8464 7.361542 GGAAACCTCATATCGATCCATGAAATG 60.362 40.741 0.00 0.00 46.21 2.32
3784 8493 1.757699 CTAGGGGAGTCCACTACAAGC 59.242 57.143 17.75 0.00 38.24 4.01
3788 8497 2.290960 GGGGAGTCCACTACAAGCAATT 60.291 50.000 12.30 0.00 35.00 2.32
3791 8500 3.623510 GGAGTCCACTACAAGCAATTAGC 59.376 47.826 3.60 0.00 46.19 3.09
3804 8513 2.227388 GCAATTAGCTGGATTCATCCCG 59.773 50.000 0.00 0.00 46.59 5.14
3850 8561 4.017867 TCGAAAGAGGAATGGGGGTTTAAT 60.018 41.667 0.00 0.00 34.84 1.40
3851 8562 4.709886 CGAAAGAGGAATGGGGGTTTAATT 59.290 41.667 0.00 0.00 0.00 1.40
3852 8563 5.186992 CGAAAGAGGAATGGGGGTTTAATTT 59.813 40.000 0.00 0.00 0.00 1.82
3853 8564 6.378848 CGAAAGAGGAATGGGGGTTTAATTTA 59.621 38.462 0.00 0.00 0.00 1.40
3854 8565 7.093684 CGAAAGAGGAATGGGGGTTTAATTTAA 60.094 37.037 0.00 0.00 0.00 1.52
3895 8606 4.532126 AGATGGGAATTATGTGCGAGGATA 59.468 41.667 0.00 0.00 0.00 2.59
3912 8623 6.590677 GCGAGGATAATGTAGAAACTATTCCC 59.409 42.308 0.00 0.00 36.12 3.97
3937 8648 3.627732 TTTTTATGCCGCGAAGTGAAA 57.372 38.095 8.23 0.00 43.07 2.69
3938 8649 3.627732 TTTTATGCCGCGAAGTGAAAA 57.372 38.095 8.23 4.75 43.07 2.29
3939 8650 3.840890 TTTATGCCGCGAAGTGAAAAT 57.159 38.095 8.23 0.00 43.07 1.82
3940 8651 3.398954 TTATGCCGCGAAGTGAAAATC 57.601 42.857 8.23 0.00 43.07 2.17
3941 8652 1.453155 ATGCCGCGAAGTGAAAATCT 58.547 45.000 8.23 0.00 43.07 2.40
3942 8653 0.796312 TGCCGCGAAGTGAAAATCTC 59.204 50.000 8.23 0.00 43.07 2.75
3943 8654 1.079503 GCCGCGAAGTGAAAATCTCT 58.920 50.000 8.23 0.00 43.07 3.10
3944 8655 1.061276 GCCGCGAAGTGAAAATCTCTC 59.939 52.381 8.23 0.00 43.07 3.20
3945 8656 1.661112 CCGCGAAGTGAAAATCTCTCC 59.339 52.381 8.23 0.00 43.07 3.71
3946 8657 1.661112 CGCGAAGTGAAAATCTCTCCC 59.339 52.381 0.00 0.00 43.07 4.30
3947 8658 2.699954 GCGAAGTGAAAATCTCTCCCA 58.300 47.619 0.00 0.00 0.00 4.37
3948 8659 3.274288 GCGAAGTGAAAATCTCTCCCAT 58.726 45.455 0.00 0.00 0.00 4.00
3949 8660 3.691609 GCGAAGTGAAAATCTCTCCCATT 59.308 43.478 0.00 0.00 0.00 3.16
3950 8661 4.156739 GCGAAGTGAAAATCTCTCCCATTT 59.843 41.667 0.00 0.00 0.00 2.32
3951 8662 5.335976 GCGAAGTGAAAATCTCTCCCATTTT 60.336 40.000 0.00 0.00 36.38 1.82
3952 8663 6.128007 GCGAAGTGAAAATCTCTCCCATTTTA 60.128 38.462 0.00 0.00 34.30 1.52
3953 8664 7.574967 GCGAAGTGAAAATCTCTCCCATTTTAA 60.575 37.037 0.00 0.00 34.30 1.52
3954 8665 7.965107 CGAAGTGAAAATCTCTCCCATTTTAAG 59.035 37.037 0.00 0.00 34.30 1.85
3955 8666 8.940397 AAGTGAAAATCTCTCCCATTTTAAGA 57.060 30.769 0.00 0.00 34.30 2.10
3956 8667 8.572855 AGTGAAAATCTCTCCCATTTTAAGAG 57.427 34.615 0.00 0.00 34.30 2.85
3957 8668 7.613411 AGTGAAAATCTCTCCCATTTTAAGAGG 59.387 37.037 0.00 0.00 37.67 3.69
3958 8669 7.611855 GTGAAAATCTCTCCCATTTTAAGAGGA 59.388 37.037 0.00 0.00 37.67 3.71
3959 8670 7.831193 TGAAAATCTCTCCCATTTTAAGAGGAG 59.169 37.037 0.00 0.00 46.11 3.69
3960 8671 6.899892 AATCTCTCCCATTTTAAGAGGAGT 57.100 37.500 4.91 0.00 45.16 3.85
3961 8672 5.683876 TCTCTCCCATTTTAAGAGGAGTG 57.316 43.478 4.91 3.12 45.16 3.51
3962 8673 4.471386 TCTCTCCCATTTTAAGAGGAGTGG 59.529 45.833 4.91 0.87 45.16 4.00
3963 8674 4.435137 TCTCCCATTTTAAGAGGAGTGGA 58.565 43.478 4.91 0.00 45.16 4.02
3964 8675 5.039645 TCTCCCATTTTAAGAGGAGTGGAT 58.960 41.667 4.91 0.00 45.16 3.41
3965 8676 5.104360 TCTCCCATTTTAAGAGGAGTGGATG 60.104 44.000 4.91 0.00 45.16 3.51
3966 8677 4.079787 TCCCATTTTAAGAGGAGTGGATGG 60.080 45.833 0.00 0.00 34.11 3.51
3967 8678 3.633986 CCATTTTAAGAGGAGTGGATGGC 59.366 47.826 0.00 0.00 0.00 4.40
3968 8679 2.691409 TTTAAGAGGAGTGGATGGCG 57.309 50.000 0.00 0.00 0.00 5.69
3969 8680 1.860641 TTAAGAGGAGTGGATGGCGA 58.139 50.000 0.00 0.00 0.00 5.54
3970 8681 1.112113 TAAGAGGAGTGGATGGCGAC 58.888 55.000 0.00 0.00 0.00 5.19
3971 8682 0.616111 AAGAGGAGTGGATGGCGACT 60.616 55.000 0.00 0.00 35.65 4.18
3972 8683 1.040339 AGAGGAGTGGATGGCGACTC 61.040 60.000 0.00 0.00 45.74 3.36
3998 8709 4.011517 GCCTCAACCGTCGGGGAA 62.012 66.667 17.28 0.00 39.97 3.97
3999 8710 2.047560 CCTCAACCGTCGGGGAAC 60.048 66.667 17.28 0.00 39.97 3.62
4000 8711 2.431942 CTCAACCGTCGGGGAACG 60.432 66.667 17.28 0.00 46.11 3.95
4008 8719 2.604079 TCGGGGAACGGCAGGTAA 60.604 61.111 0.00 0.00 44.45 2.85
4009 8720 2.125269 CGGGGAACGGCAGGTAAG 60.125 66.667 0.00 0.00 39.42 2.34
4010 8721 2.271173 GGGGAACGGCAGGTAAGG 59.729 66.667 0.00 0.00 0.00 2.69
4011 8722 2.271173 GGGAACGGCAGGTAAGGG 59.729 66.667 0.00 0.00 0.00 3.95
4012 8723 2.599757 GGGAACGGCAGGTAAGGGT 61.600 63.158 0.00 0.00 0.00 4.34
4013 8724 1.078637 GGAACGGCAGGTAAGGGTC 60.079 63.158 0.00 0.00 0.00 4.46
4014 8725 1.447314 GAACGGCAGGTAAGGGTCG 60.447 63.158 0.00 0.00 38.26 4.79
4015 8726 2.847435 GAACGGCAGGTAAGGGTCGG 62.847 65.000 0.00 0.00 36.23 4.79
4016 8727 3.387947 CGGCAGGTAAGGGTCGGT 61.388 66.667 0.00 0.00 0.00 4.69
4017 8728 2.951101 CGGCAGGTAAGGGTCGGTT 61.951 63.158 0.00 0.00 0.00 4.44
4018 8729 1.377612 GGCAGGTAAGGGTCGGTTT 59.622 57.895 0.00 0.00 0.00 3.27
4019 8730 0.251033 GGCAGGTAAGGGTCGGTTTT 60.251 55.000 0.00 0.00 0.00 2.43
4020 8731 0.879090 GCAGGTAAGGGTCGGTTTTG 59.121 55.000 0.00 0.00 0.00 2.44
4021 8732 1.530323 CAGGTAAGGGTCGGTTTTGG 58.470 55.000 0.00 0.00 0.00 3.28
4022 8733 0.402887 AGGTAAGGGTCGGTTTTGGG 59.597 55.000 0.00 0.00 0.00 4.12
4023 8734 1.246056 GGTAAGGGTCGGTTTTGGGC 61.246 60.000 0.00 0.00 0.00 5.36
4024 8735 1.302671 TAAGGGTCGGTTTTGGGCG 60.303 57.895 0.00 0.00 0.00 6.13
4027 8738 4.038080 GGTCGGTTTTGGGCGCTG 62.038 66.667 7.64 0.00 0.00 5.18
4028 8739 4.038080 GTCGGTTTTGGGCGCTGG 62.038 66.667 7.64 0.00 0.00 4.85
4029 8740 4.572571 TCGGTTTTGGGCGCTGGT 62.573 61.111 7.64 0.00 0.00 4.00
4030 8741 2.670251 CGGTTTTGGGCGCTGGTA 60.670 61.111 7.64 0.00 0.00 3.25
4031 8742 2.686816 CGGTTTTGGGCGCTGGTAG 61.687 63.158 7.64 0.00 0.00 3.18
4032 8743 1.302993 GGTTTTGGGCGCTGGTAGA 60.303 57.895 7.64 0.00 0.00 2.59
4033 8744 1.583495 GGTTTTGGGCGCTGGTAGAC 61.583 60.000 7.64 0.00 0.00 2.59
4034 8745 1.669760 TTTTGGGCGCTGGTAGACG 60.670 57.895 7.64 0.00 0.00 4.18
4035 8746 2.102109 TTTTGGGCGCTGGTAGACGA 62.102 55.000 7.64 0.00 0.00 4.20
4036 8747 2.775032 TTTGGGCGCTGGTAGACGAC 62.775 60.000 7.64 0.00 36.28 4.34
4037 8748 4.849329 GGGCGCTGGTAGACGACG 62.849 72.222 7.64 0.00 38.52 5.12
4041 8752 4.849329 GCTGGTAGACGACGCCGG 62.849 72.222 0.00 0.00 40.78 6.13
4042 8753 3.437795 CTGGTAGACGACGCCGGT 61.438 66.667 1.90 0.00 40.78 5.28
4043 8754 3.678717 CTGGTAGACGACGCCGGTG 62.679 68.421 14.93 14.93 40.78 4.94
4044 8755 3.434319 GGTAGACGACGCCGGTGA 61.434 66.667 24.59 0.00 40.78 4.02
4045 8756 2.202401 GTAGACGACGCCGGTGAC 60.202 66.667 24.59 15.57 40.78 3.67
4046 8757 2.359107 TAGACGACGCCGGTGACT 60.359 61.111 24.59 16.31 40.78 3.41
4047 8758 2.393768 TAGACGACGCCGGTGACTC 61.394 63.158 24.59 14.34 40.78 3.36
4066 8777 4.131088 GAGGACGAGGGCGGTGAC 62.131 72.222 0.00 0.00 43.17 3.67
4067 8778 4.680537 AGGACGAGGGCGGTGACT 62.681 66.667 0.00 0.00 43.17 3.41
4068 8779 4.131088 GGACGAGGGCGGTGACTC 62.131 72.222 0.00 0.00 43.17 3.36
4072 8783 4.131088 GAGGGCGGTGACTCGGAC 62.131 72.222 0.00 0.00 0.00 4.79
4078 8789 4.477975 GGTGACTCGGACGGCGAG 62.478 72.222 16.62 2.02 39.20 5.03
4079 8790 4.477975 GTGACTCGGACGGCGAGG 62.478 72.222 16.62 1.48 37.76 4.63
4080 8791 4.710167 TGACTCGGACGGCGAGGA 62.710 66.667 16.62 6.51 37.76 3.71
4081 8792 3.437795 GACTCGGACGGCGAGGAA 61.438 66.667 16.62 0.00 37.76 3.36
4082 8793 3.680338 GACTCGGACGGCGAGGAAC 62.680 68.421 16.62 0.00 37.76 3.62
4083 8794 4.493747 CTCGGACGGCGAGGAACC 62.494 72.222 16.62 7.78 0.00 3.62
4086 8797 4.754667 GGACGGCGAGGAACCACC 62.755 72.222 16.62 0.00 39.35 4.61
4087 8798 3.998672 GACGGCGAGGAACCACCA 61.999 66.667 16.62 0.00 42.04 4.17
4088 8799 4.309950 ACGGCGAGGAACCACCAC 62.310 66.667 16.62 0.00 42.04 4.16
4092 8803 3.622826 CGAGGAACCACCACCGGT 61.623 66.667 0.00 0.00 42.71 5.28
4122 8833 3.554692 GCCGTCGGACGCAATCTG 61.555 66.667 24.26 11.00 40.91 2.90
4123 8834 3.554692 CCGTCGGACGCAATCTGC 61.555 66.667 24.26 0.00 40.91 4.26
4132 8843 2.401195 GCAATCTGCGAGGCGTTC 59.599 61.111 0.00 0.00 31.71 3.95
4133 8844 3.093278 CAATCTGCGAGGCGTTCC 58.907 61.111 0.00 0.00 0.00 3.62
4134 8845 2.509336 AATCTGCGAGGCGTTCCG 60.509 61.111 0.00 0.00 37.47 4.30
4135 8846 4.514577 ATCTGCGAGGCGTTCCGG 62.515 66.667 0.00 0.00 37.47 5.14
4150 8861 1.776662 TCCGGGTTGGATACTCTGAG 58.223 55.000 0.00 2.45 43.74 3.35
4151 8862 1.286849 TCCGGGTTGGATACTCTGAGA 59.713 52.381 12.44 0.00 43.74 3.27
4152 8863 2.108168 CCGGGTTGGATACTCTGAGAA 58.892 52.381 12.44 0.00 42.00 2.87
4153 8864 2.159085 CCGGGTTGGATACTCTGAGAAC 60.159 54.545 12.44 4.73 42.00 3.01
4154 8865 2.479730 CGGGTTGGATACTCTGAGAACG 60.480 54.545 12.44 0.00 37.61 3.95
4155 8866 2.758979 GGGTTGGATACTCTGAGAACGA 59.241 50.000 12.44 0.00 37.61 3.85
4156 8867 3.181485 GGGTTGGATACTCTGAGAACGAG 60.181 52.174 12.44 0.00 37.61 4.18
4157 8868 3.181485 GGTTGGATACTCTGAGAACGAGG 60.181 52.174 12.44 0.00 32.83 4.63
4158 8869 3.367646 TGGATACTCTGAGAACGAGGT 57.632 47.619 12.44 0.00 32.83 3.85
4159 8870 3.017442 TGGATACTCTGAGAACGAGGTG 58.983 50.000 12.44 0.00 32.83 4.00
4160 8871 2.359531 GGATACTCTGAGAACGAGGTGG 59.640 54.545 12.44 0.00 32.83 4.61
4161 8872 1.174783 TACTCTGAGAACGAGGTGGC 58.825 55.000 12.44 0.00 32.83 5.01
4162 8873 1.153939 CTCTGAGAACGAGGTGGCG 60.154 63.158 0.00 0.00 37.29 5.69
4169 8880 2.972505 ACGAGGTGGCGTTGCTTG 60.973 61.111 0.00 0.00 42.71 4.01
4170 8881 2.972505 CGAGGTGGCGTTGCTTGT 60.973 61.111 0.00 0.00 0.00 3.16
4171 8882 2.542907 CGAGGTGGCGTTGCTTGTT 61.543 57.895 0.00 0.00 0.00 2.83
4172 8883 1.008538 GAGGTGGCGTTGCTTGTTG 60.009 57.895 0.00 0.00 0.00 3.33
4173 8884 1.444119 GAGGTGGCGTTGCTTGTTGA 61.444 55.000 0.00 0.00 0.00 3.18
4174 8885 1.299089 GGTGGCGTTGCTTGTTGAC 60.299 57.895 0.00 0.00 0.00 3.18
4175 8886 1.299089 GTGGCGTTGCTTGTTGACC 60.299 57.895 0.00 0.00 0.00 4.02
4176 8887 1.453015 TGGCGTTGCTTGTTGACCT 60.453 52.632 0.00 0.00 0.00 3.85
4177 8888 1.008538 GGCGTTGCTTGTTGACCTG 60.009 57.895 0.00 0.00 0.00 4.00
4178 8889 1.008538 GCGTTGCTTGTTGACCTGG 60.009 57.895 0.00 0.00 0.00 4.45
4179 8890 1.724582 GCGTTGCTTGTTGACCTGGT 61.725 55.000 0.00 0.00 0.00 4.00
4180 8891 0.029300 CGTTGCTTGTTGACCTGGTG 59.971 55.000 2.82 0.00 0.00 4.17
4181 8892 1.388547 GTTGCTTGTTGACCTGGTGA 58.611 50.000 2.82 0.00 0.00 4.02
4182 8893 1.956477 GTTGCTTGTTGACCTGGTGAT 59.044 47.619 2.82 0.00 0.00 3.06
4183 8894 1.896220 TGCTTGTTGACCTGGTGATC 58.104 50.000 2.82 0.00 0.00 2.92
4184 8895 1.168714 GCTTGTTGACCTGGTGATCC 58.831 55.000 2.82 0.00 0.00 3.36
4185 8896 1.826385 CTTGTTGACCTGGTGATCCC 58.174 55.000 2.82 0.00 0.00 3.85
4186 8897 1.352352 CTTGTTGACCTGGTGATCCCT 59.648 52.381 2.82 0.00 0.00 4.20
4187 8898 0.984230 TGTTGACCTGGTGATCCCTC 59.016 55.000 2.82 0.00 0.00 4.30
4188 8899 0.108138 GTTGACCTGGTGATCCCTCG 60.108 60.000 2.82 0.00 0.00 4.63
4189 8900 1.899437 TTGACCTGGTGATCCCTCGC 61.899 60.000 2.82 0.00 0.00 5.03
4190 8901 3.432051 GACCTGGTGATCCCTCGCG 62.432 68.421 2.82 0.00 32.43 5.87
4191 8902 3.147595 CCTGGTGATCCCTCGCGA 61.148 66.667 9.26 9.26 32.43 5.87
4192 8903 2.105128 CTGGTGATCCCTCGCGAC 59.895 66.667 3.71 0.00 32.43 5.19
4193 8904 3.758088 CTGGTGATCCCTCGCGACG 62.758 68.421 3.71 0.04 32.43 5.12
4194 8905 3.515286 GGTGATCCCTCGCGACGA 61.515 66.667 3.71 3.75 32.43 4.20
4195 8906 2.722487 GTGATCCCTCGCGACGAT 59.278 61.111 3.71 9.39 34.61 3.73
4196 8907 1.370657 GTGATCCCTCGCGACGATC 60.371 63.158 24.65 24.65 34.61 3.69
4197 8908 2.255856 GATCCCTCGCGACGATCC 59.744 66.667 22.41 10.60 34.61 3.36
4198 8909 3.596667 GATCCCTCGCGACGATCCG 62.597 68.421 22.41 6.93 34.61 4.18
4207 8918 4.933064 GACGATCCGGCGAGGCTG 62.933 72.222 9.30 0.00 40.77 4.85
4215 8926 3.706373 GGCGAGGCTGGGACTGAA 61.706 66.667 0.00 0.00 0.00 3.02
4216 8927 2.125350 GCGAGGCTGGGACTGAAG 60.125 66.667 0.00 0.00 0.00 3.02
4217 8928 2.581354 CGAGGCTGGGACTGAAGG 59.419 66.667 0.00 0.00 0.00 3.46
4218 8929 1.984570 CGAGGCTGGGACTGAAGGA 60.985 63.158 0.00 0.00 0.00 3.36
4219 8930 1.904032 GAGGCTGGGACTGAAGGAG 59.096 63.158 0.00 0.00 0.00 3.69
4220 8931 1.614824 AGGCTGGGACTGAAGGAGG 60.615 63.158 0.00 0.00 0.00 4.30
4221 8932 1.613630 GGCTGGGACTGAAGGAGGA 60.614 63.158 0.00 0.00 0.00 3.71
4222 8933 1.621672 GGCTGGGACTGAAGGAGGAG 61.622 65.000 0.00 0.00 0.00 3.69
4223 8934 1.621672 GCTGGGACTGAAGGAGGAGG 61.622 65.000 0.00 0.00 0.00 4.30
4224 8935 0.041833 CTGGGACTGAAGGAGGAGGA 59.958 60.000 0.00 0.00 0.00 3.71
4225 8936 0.252284 TGGGACTGAAGGAGGAGGAC 60.252 60.000 0.00 0.00 0.00 3.85
4226 8937 0.252284 GGGACTGAAGGAGGAGGACA 60.252 60.000 0.00 0.00 0.00 4.02
4227 8938 1.190643 GGACTGAAGGAGGAGGACAG 58.809 60.000 0.00 0.00 35.14 3.51
4228 8939 0.534873 GACTGAAGGAGGAGGACAGC 59.465 60.000 0.00 0.00 32.67 4.40
4229 8940 1.254284 ACTGAAGGAGGAGGACAGCG 61.254 60.000 0.00 0.00 32.67 5.18
4230 8941 1.228894 TGAAGGAGGAGGACAGCGT 60.229 57.895 0.00 0.00 0.00 5.07
4231 8942 1.251527 TGAAGGAGGAGGACAGCGTC 61.252 60.000 0.79 0.79 0.00 5.19
4232 8943 2.272918 GAAGGAGGAGGACAGCGTCG 62.273 65.000 3.27 0.00 32.65 5.12
4233 8944 2.750637 GGAGGAGGACAGCGTCGA 60.751 66.667 0.00 0.00 32.65 4.20
4234 8945 2.766400 GGAGGAGGACAGCGTCGAG 61.766 68.421 0.00 0.00 32.65 4.04
4235 8946 1.745864 GAGGAGGACAGCGTCGAGA 60.746 63.158 0.00 0.00 32.65 4.04
4236 8947 1.077357 AGGAGGACAGCGTCGAGAT 60.077 57.895 0.00 0.00 32.65 2.75
4237 8948 0.180642 AGGAGGACAGCGTCGAGATA 59.819 55.000 0.00 0.00 32.65 1.98
4238 8949 0.589223 GGAGGACAGCGTCGAGATAG 59.411 60.000 0.00 0.00 32.65 2.08
4239 8950 1.301423 GAGGACAGCGTCGAGATAGT 58.699 55.000 0.00 0.00 32.65 2.12
4240 8951 1.671845 GAGGACAGCGTCGAGATAGTT 59.328 52.381 0.00 0.00 32.65 2.24
4241 8952 1.671845 AGGACAGCGTCGAGATAGTTC 59.328 52.381 0.00 0.00 32.65 3.01
4242 8953 1.595003 GGACAGCGTCGAGATAGTTCG 60.595 57.143 0.00 0.00 41.79 3.95
4243 8954 0.248134 ACAGCGTCGAGATAGTTCGC 60.248 55.000 6.24 6.24 45.82 4.70
4244 8955 0.930742 CAGCGTCGAGATAGTTCGCC 60.931 60.000 10.22 0.00 46.49 5.54
4245 8956 2.004489 GCGTCGAGATAGTTCGCCG 61.004 63.158 0.00 0.00 43.79 6.46
4246 8957 2.004489 CGTCGAGATAGTTCGCCGC 61.004 63.158 0.00 0.00 35.19 6.53
4247 8958 1.657794 GTCGAGATAGTTCGCCGCC 60.658 63.158 0.00 0.00 40.29 6.13
4248 8959 1.822613 TCGAGATAGTTCGCCGCCT 60.823 57.895 0.00 0.00 40.29 5.52
4249 8960 1.370657 CGAGATAGTTCGCCGCCTC 60.371 63.158 0.00 0.00 33.39 4.70
4250 8961 1.370657 GAGATAGTTCGCCGCCTCG 60.371 63.158 0.00 0.00 0.00 4.63
4251 8962 2.061182 GAGATAGTTCGCCGCCTCGT 62.061 60.000 0.00 0.00 0.00 4.18
4252 8963 1.657794 GATAGTTCGCCGCCTCGTC 60.658 63.158 0.00 0.00 0.00 4.20
4253 8964 3.135056 ATAGTTCGCCGCCTCGTCC 62.135 63.158 0.00 0.00 0.00 4.79
4255 8966 4.814294 GTTCGCCGCCTCGTCCAT 62.814 66.667 0.00 0.00 0.00 3.41
4256 8967 4.077184 TTCGCCGCCTCGTCCATT 62.077 61.111 0.00 0.00 0.00 3.16
4257 8968 4.812476 TCGCCGCCTCGTCCATTG 62.812 66.667 0.00 0.00 0.00 2.82
4259 8970 3.195698 GCCGCCTCGTCCATTGTC 61.196 66.667 0.00 0.00 0.00 3.18
4260 8971 2.885644 CCGCCTCGTCCATTGTCG 60.886 66.667 0.00 0.00 0.00 4.35
4261 8972 3.554692 CGCCTCGTCCATTGTCGC 61.555 66.667 0.00 0.00 0.00 5.19
4262 8973 2.434185 GCCTCGTCCATTGTCGCA 60.434 61.111 0.00 0.00 0.00 5.10
4263 8974 2.740714 GCCTCGTCCATTGTCGCAC 61.741 63.158 0.00 0.00 0.00 5.34
4264 8975 2.444624 CCTCGTCCATTGTCGCACG 61.445 63.158 0.00 0.00 0.00 5.34
4265 8976 2.431771 TCGTCCATTGTCGCACGG 60.432 61.111 0.00 0.00 33.02 4.94
4266 8977 4.147322 CGTCCATTGTCGCACGGC 62.147 66.667 0.00 0.00 0.00 5.68
4291 9002 4.962836 GGGATCCGGCCTGGCATG 62.963 72.222 22.05 12.10 37.80 4.06
4292 9003 4.962836 GGATCCGGCCTGGCATGG 62.963 72.222 22.05 20.81 37.80 3.66
4293 9004 4.195334 GATCCGGCCTGGCATGGT 62.195 66.667 22.05 6.58 37.80 3.55
4294 9005 4.195334 ATCCGGCCTGGCATGGTC 62.195 66.667 22.05 0.93 37.80 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.923270 AGAGAAAGAGAAAGAGAAAGAGAAAGA 58.077 33.333 0.00 0.00 0.00 2.52
1 2 9.546428 AAGAGAAAGAGAAAGAGAAAGAGAAAG 57.454 33.333 0.00 0.00 0.00 2.62
2 3 9.898152 AAAGAGAAAGAGAAAGAGAAAGAGAAA 57.102 29.630 0.00 0.00 0.00 2.52
3 4 9.541143 GAAAGAGAAAGAGAAAGAGAAAGAGAA 57.459 33.333 0.00 0.00 0.00 2.87
5 6 9.196552 GAGAAAGAGAAAGAGAAAGAGAAAGAG 57.803 37.037 0.00 0.00 0.00 2.85
6 7 8.923270 AGAGAAAGAGAAAGAGAAAGAGAAAGA 58.077 33.333 0.00 0.00 0.00 2.52
7 8 9.546428 AAGAGAAAGAGAAAGAGAAAGAGAAAG 57.454 33.333 0.00 0.00 0.00 2.62
8 9 9.541143 GAAGAGAAAGAGAAAGAGAAAGAGAAA 57.459 33.333 0.00 0.00 0.00 2.52
9 10 8.147704 GGAAGAGAAAGAGAAAGAGAAAGAGAA 58.852 37.037 0.00 0.00 0.00 2.87
11 12 7.670364 AGGAAGAGAAAGAGAAAGAGAAAGAG 58.330 38.462 0.00 0.00 0.00 2.85
13 14 9.423061 CTTAGGAAGAGAAAGAGAAAGAGAAAG 57.577 37.037 0.00 0.00 0.00 2.62
14 15 9.148879 TCTTAGGAAGAGAAAGAGAAAGAGAAA 57.851 33.333 0.00 0.00 32.71 2.52
15 16 8.713708 TCTTAGGAAGAGAAAGAGAAAGAGAA 57.286 34.615 0.00 0.00 32.71 2.87
16 17 8.713708 TTCTTAGGAAGAGAAAGAGAAAGAGA 57.286 34.615 0.00 0.00 39.03 3.10
17 18 9.942850 ATTTCTTAGGAAGAGAAAGAGAAAGAG 57.057 33.333 5.65 0.00 43.89 2.85
18 19 9.717942 CATTTCTTAGGAAGAGAAAGAGAAAGA 57.282 33.333 5.65 0.00 43.89 2.52
19 20 9.500785 ACATTTCTTAGGAAGAGAAAGAGAAAG 57.499 33.333 5.65 0.00 43.89 2.62
75 2791 5.010012 CCCTGCAAGATAATCCCAATTGTAC 59.990 44.000 4.43 0.00 34.07 2.90
76 2792 5.139727 CCCTGCAAGATAATCCCAATTGTA 58.860 41.667 4.43 0.00 34.07 2.41
77 2793 3.962718 CCCTGCAAGATAATCCCAATTGT 59.037 43.478 4.43 0.00 34.07 2.71
78 2794 3.962718 ACCCTGCAAGATAATCCCAATTG 59.037 43.478 0.00 0.00 34.07 2.32
79 2795 4.270317 ACCCTGCAAGATAATCCCAATT 57.730 40.909 0.00 0.00 34.07 2.32
80 2796 3.979501 ACCCTGCAAGATAATCCCAAT 57.020 42.857 0.00 0.00 34.07 3.16
81 2797 3.117663 GGTACCCTGCAAGATAATCCCAA 60.118 47.826 0.00 0.00 34.07 4.12
82 2798 2.441750 GGTACCCTGCAAGATAATCCCA 59.558 50.000 0.00 0.00 34.07 4.37
83 2799 2.550208 CGGTACCCTGCAAGATAATCCC 60.550 54.545 6.25 0.00 34.07 3.85
84 2800 2.367567 TCGGTACCCTGCAAGATAATCC 59.632 50.000 6.25 0.00 34.07 3.01
85 2801 3.746045 TCGGTACCCTGCAAGATAATC 57.254 47.619 6.25 0.00 34.07 1.75
86 2802 3.646162 TGATCGGTACCCTGCAAGATAAT 59.354 43.478 6.25 0.00 34.07 1.28
87 2803 3.035363 TGATCGGTACCCTGCAAGATAA 58.965 45.455 6.25 0.00 34.07 1.75
88 2804 2.364324 GTGATCGGTACCCTGCAAGATA 59.636 50.000 6.25 0.00 34.07 1.98
89 2805 1.139058 GTGATCGGTACCCTGCAAGAT 59.861 52.381 6.25 1.55 34.07 2.40
90 2806 0.535335 GTGATCGGTACCCTGCAAGA 59.465 55.000 6.25 0.00 34.07 3.02
91 2807 0.537188 AGTGATCGGTACCCTGCAAG 59.463 55.000 6.25 0.00 0.00 4.01
92 2808 0.249120 CAGTGATCGGTACCCTGCAA 59.751 55.000 6.25 0.00 0.00 4.08
93 2809 0.613572 TCAGTGATCGGTACCCTGCA 60.614 55.000 6.25 0.00 0.00 4.41
94 2810 0.535335 TTCAGTGATCGGTACCCTGC 59.465 55.000 6.25 0.00 0.00 4.85
95 2811 3.118775 TCATTTCAGTGATCGGTACCCTG 60.119 47.826 6.25 7.54 0.00 4.45
96 2812 3.104512 TCATTTCAGTGATCGGTACCCT 58.895 45.455 6.25 0.00 0.00 4.34
97 2813 3.536956 TCATTTCAGTGATCGGTACCC 57.463 47.619 6.25 0.00 0.00 3.69
98 2814 4.250464 TGTTCATTTCAGTGATCGGTACC 58.750 43.478 0.16 0.16 0.00 3.34
103 2819 6.471841 TGTGTTTTTGTTCATTTCAGTGATCG 59.528 34.615 0.00 0.00 0.00 3.69
104 2820 7.754069 TGTGTTTTTGTTCATTTCAGTGATC 57.246 32.000 0.00 0.00 0.00 2.92
106 2822 8.545229 AATTGTGTTTTTGTTCATTTCAGTGA 57.455 26.923 0.00 0.00 0.00 3.41
123 2839 6.650390 GCCATTTGAATAGGTTGAATTGTGTT 59.350 34.615 0.00 0.00 0.00 3.32
132 2848 6.238759 GCCTACTTAGCCATTTGAATAGGTTG 60.239 42.308 0.00 0.00 32.21 3.77
194 2911 0.319405 AAAGCTGGCACTGAAATGGC 59.681 50.000 0.00 0.00 45.14 4.40
196 2913 3.246699 CACAAAAAGCTGGCACTGAAATG 59.753 43.478 0.00 0.00 0.00 2.32
209 2926 8.659491 AGAAACAAATTTTCTCTCACAAAAAGC 58.341 29.630 0.00 0.00 33.86 3.51
257 2974 5.610398 AGTATGCAACGGTTCATCATGATA 58.390 37.500 8.15 0.00 0.00 2.15
326 3043 4.328983 CGCACATGAATTACTCCGTACTTT 59.671 41.667 0.00 0.00 0.00 2.66
333 3050 7.891183 AGTATTATCGCACATGAATTACTCC 57.109 36.000 0.00 0.00 0.00 3.85
416 3141 5.354234 CGCTTGGAATTGTTAGTATGGACTT 59.646 40.000 0.00 0.00 37.10 3.01
431 3156 3.950397 TGGACAATTACTCGCTTGGAAT 58.050 40.909 0.00 0.00 0.00 3.01
448 3173 5.684704 TCATGATCCTTTGATACCTTGGAC 58.315 41.667 0.00 0.00 0.00 4.02
494 3219 4.915085 CGCCTATTCGTGTGTCAAATTTTT 59.085 37.500 0.00 0.00 0.00 1.94
508 3233 0.179171 ACTGTCGACACGCCTATTCG 60.179 55.000 15.76 4.02 0.00 3.34
520 3245 5.965922 ACATCTCATGTTCATAACTGTCGA 58.034 37.500 0.00 0.00 41.63 4.20
550 3275 8.761575 TCCTCTTGCAAATTGAATTTCAATAC 57.238 30.769 21.68 15.38 45.57 1.89
553 3278 7.308109 GCATTCCTCTTGCAAATTGAATTTCAA 60.308 33.333 13.88 13.88 39.14 2.69
573 3298 2.436173 AGTACTTGCTAGAGGGCATTCC 59.564 50.000 1.04 0.00 42.09 3.01
574 3299 3.386402 AGAGTACTTGCTAGAGGGCATTC 59.614 47.826 1.04 0.00 42.09 2.67
578 3303 2.621526 GAGAGAGTACTTGCTAGAGGGC 59.378 54.545 1.04 0.00 0.00 5.19
579 3304 3.882888 CAGAGAGAGTACTTGCTAGAGGG 59.117 52.174 1.04 0.00 0.00 4.30
580 3305 3.315191 GCAGAGAGAGTACTTGCTAGAGG 59.685 52.174 8.86 0.00 0.00 3.69
581 3306 3.315191 GGCAGAGAGAGTACTTGCTAGAG 59.685 52.174 14.43 3.19 0.00 2.43
582 3307 3.053991 AGGCAGAGAGAGTACTTGCTAGA 60.054 47.826 14.43 0.00 0.00 2.43
583 3308 3.287222 AGGCAGAGAGAGTACTTGCTAG 58.713 50.000 14.43 0.00 0.00 3.42
584 3309 3.283751 GAGGCAGAGAGAGTACTTGCTA 58.716 50.000 14.43 0.00 0.00 3.49
585 3310 2.099405 GAGGCAGAGAGAGTACTTGCT 58.901 52.381 14.43 7.20 0.00 3.91
586 3311 1.821753 TGAGGCAGAGAGAGTACTTGC 59.178 52.381 7.79 7.79 0.00 4.01
588 3313 3.898123 TGTTTGAGGCAGAGAGAGTACTT 59.102 43.478 0.00 0.00 0.00 2.24
590 3315 3.944055 TGTTTGAGGCAGAGAGAGTAC 57.056 47.619 0.00 0.00 0.00 2.73
592 3317 3.845781 TTTGTTTGAGGCAGAGAGAGT 57.154 42.857 0.00 0.00 0.00 3.24
595 3320 4.843220 ACATTTTGTTTGAGGCAGAGAG 57.157 40.909 0.00 0.00 0.00 3.20
597 3322 6.016777 AGTCTTACATTTTGTTTGAGGCAGAG 60.017 38.462 0.00 0.00 0.00 3.35
599 3324 6.076981 AGTCTTACATTTTGTTTGAGGCAG 57.923 37.500 0.00 0.00 0.00 4.85
637 3362 4.692625 CCACTGTCTCGAAATGAAAGACAT 59.307 41.667 5.03 0.00 45.99 3.06
639 3364 3.433615 CCCACTGTCTCGAAATGAAAGAC 59.566 47.826 0.00 0.00 39.87 3.01
640 3365 3.557054 CCCCACTGTCTCGAAATGAAAGA 60.557 47.826 0.00 0.00 0.00 2.52
641 3366 2.744202 CCCCACTGTCTCGAAATGAAAG 59.256 50.000 0.00 0.00 0.00 2.62
644 3369 0.613260 CCCCCACTGTCTCGAAATGA 59.387 55.000 0.00 0.00 0.00 2.57
646 3371 1.946984 TACCCCCACTGTCTCGAAAT 58.053 50.000 0.00 0.00 0.00 2.17
647 3372 1.946984 ATACCCCCACTGTCTCGAAA 58.053 50.000 0.00 0.00 0.00 3.46
648 3373 2.832643 TATACCCCCACTGTCTCGAA 57.167 50.000 0.00 0.00 0.00 3.71
650 3375 3.757493 GAGTATATACCCCCACTGTCTCG 59.243 52.174 9.32 0.00 0.00 4.04
651 3376 4.737578 TGAGTATATACCCCCACTGTCTC 58.262 47.826 9.32 0.00 0.00 3.36
652 3377 4.419200 TCTGAGTATATACCCCCACTGTCT 59.581 45.833 9.32 0.00 0.00 3.41
653 3378 4.737578 TCTGAGTATATACCCCCACTGTC 58.262 47.826 9.32 0.00 0.00 3.51
655 3380 4.467795 CCATCTGAGTATATACCCCCACTG 59.532 50.000 9.32 1.55 0.00 3.66
657 3382 4.426704 ACCATCTGAGTATATACCCCCAC 58.573 47.826 9.32 0.00 0.00 4.61
658 3383 4.777877 ACCATCTGAGTATATACCCCCA 57.222 45.455 9.32 4.94 0.00 4.96
659 3384 5.424573 GGTAACCATCTGAGTATATACCCCC 59.575 48.000 9.32 0.56 0.00 5.40
660 3385 6.021030 TGGTAACCATCTGAGTATATACCCC 58.979 44.000 9.32 2.95 32.46 4.95
661 3386 7.735326 ATGGTAACCATCTGAGTATATACCC 57.265 40.000 9.32 0.00 40.74 3.69
687 3412 9.752961 GTTGGTTTTGTTAAGTTGTGGTTATAT 57.247 29.630 0.00 0.00 0.00 0.86
688 3413 8.746530 TGTTGGTTTTGTTAAGTTGTGGTTATA 58.253 29.630 0.00 0.00 0.00 0.98
692 3417 5.470047 TGTTGGTTTTGTTAAGTTGTGGT 57.530 34.783 0.00 0.00 0.00 4.16
696 3868 9.487790 AATCCATATGTTGGTTTTGTTAAGTTG 57.512 29.630 1.24 0.00 46.52 3.16
701 3873 9.480861 TGGATAATCCATATGTTGGTTTTGTTA 57.519 29.630 1.24 0.00 42.67 2.41
726 3898 7.141100 AGAGGTTTACAACGTTTGGATTATG 57.859 36.000 0.00 0.00 34.12 1.90
728 3900 7.571080 AAAGAGGTTTACAACGTTTGGATTA 57.429 32.000 0.00 0.00 34.12 1.75
730 3902 7.754851 ATAAAGAGGTTTACAACGTTTGGAT 57.245 32.000 0.00 0.00 30.79 3.41
731 3903 7.282675 TCAATAAAGAGGTTTACAACGTTTGGA 59.717 33.333 0.00 0.00 30.79 3.53
732 3904 7.419204 TCAATAAAGAGGTTTACAACGTTTGG 58.581 34.615 0.00 0.00 30.79 3.28
778 3950 9.967346 GCTCTTTTAGTTTTGACCTTTAAAGAT 57.033 29.630 16.98 0.00 32.06 2.40
785 3957 9.529325 GTTTTATGCTCTTTTAGTTTTGACCTT 57.471 29.630 0.00 0.00 0.00 3.50
786 3958 8.691797 TGTTTTATGCTCTTTTAGTTTTGACCT 58.308 29.630 0.00 0.00 0.00 3.85
787 3959 8.865590 TGTTTTATGCTCTTTTAGTTTTGACC 57.134 30.769 0.00 0.00 0.00 4.02
797 3969 9.143631 GTGCATATTCTTGTTTTATGCTCTTTT 57.856 29.630 13.42 0.00 45.33 2.27
798 3970 8.306038 TGTGCATATTCTTGTTTTATGCTCTTT 58.694 29.630 13.42 0.00 45.33 2.52
801 3973 7.970061 TCTTGTGCATATTCTTGTTTTATGCTC 59.030 33.333 13.42 10.88 45.33 4.26
802 3974 7.829725 TCTTGTGCATATTCTTGTTTTATGCT 58.170 30.769 13.42 0.00 45.33 3.79
803 3975 8.638685 ATCTTGTGCATATTCTTGTTTTATGC 57.361 30.769 7.09 7.09 45.33 3.14
820 4230 5.049129 GCTATGGTCTTGGAATATCTTGTGC 60.049 44.000 0.00 0.00 0.00 4.57
853 4267 8.749354 AGATGTTTTCCGCTAATTTATTCCTTT 58.251 29.630 0.00 0.00 0.00 3.11
855 4269 7.881775 AGATGTTTTCCGCTAATTTATTCCT 57.118 32.000 0.00 0.00 0.00 3.36
867 4286 2.945278 TCATGCAAAGATGTTTTCCGC 58.055 42.857 0.00 0.00 0.00 5.54
870 4289 6.347888 CCATTGGTTCATGCAAAGATGTTTTC 60.348 38.462 0.00 0.00 0.00 2.29
872 4291 4.998672 CCATTGGTTCATGCAAAGATGTTT 59.001 37.500 0.00 0.00 0.00 2.83
875 4294 3.930229 CACCATTGGTTCATGCAAAGATG 59.070 43.478 5.34 0.00 31.02 2.90
876 4295 3.833650 TCACCATTGGTTCATGCAAAGAT 59.166 39.130 5.34 0.00 31.02 2.40
877 4296 3.229293 TCACCATTGGTTCATGCAAAGA 58.771 40.909 5.34 0.00 31.02 2.52
878 4297 3.663995 TCACCATTGGTTCATGCAAAG 57.336 42.857 5.34 0.00 31.02 2.77
882 4301 2.036992 TGGTTTCACCATTGGTTCATGC 59.963 45.455 5.34 0.00 44.79 4.06
894 4313 3.020984 TCTTTTCACCACTGGTTTCACC 58.979 45.455 0.00 0.00 39.22 4.02
895 4314 4.261614 GGATCTTTTCACCACTGGTTTCAC 60.262 45.833 0.00 0.00 31.02 3.18
896 4315 3.888930 GGATCTTTTCACCACTGGTTTCA 59.111 43.478 0.00 0.00 31.02 2.69
908 4336 4.592942 CAGTTCATCCTGGGATCTTTTCA 58.407 43.478 0.00 0.00 31.62 2.69
918 4346 0.890683 GTTTGGGCAGTTCATCCTGG 59.109 55.000 0.00 0.00 32.92 4.45
919 4347 0.890683 GGTTTGGGCAGTTCATCCTG 59.109 55.000 0.00 0.00 35.49 3.86
920 4348 0.609131 CGGTTTGGGCAGTTCATCCT 60.609 55.000 0.00 0.00 0.00 3.24
921 4349 1.883021 CGGTTTGGGCAGTTCATCC 59.117 57.895 0.00 0.00 0.00 3.51
922 4350 1.212751 GCGGTTTGGGCAGTTCATC 59.787 57.895 0.00 0.00 0.00 2.92
944 4372 1.349973 GAATGCGCGAAGGAGAAGC 59.650 57.895 12.10 0.00 0.00 3.86
985 4413 0.995675 ATGGTGAAGGGGGAGATGGG 60.996 60.000 0.00 0.00 0.00 4.00
998 4426 0.686789 CCTCTGGTGTGTGATGGTGA 59.313 55.000 0.00 0.00 0.00 4.02
1009 4437 2.348998 GGGTCTGTGCCTCTGGTG 59.651 66.667 0.00 0.00 0.00 4.17
1055 4483 0.385390 CTTGGGGTTTGTCTGTGTGC 59.615 55.000 0.00 0.00 0.00 4.57
1128 4556 2.434359 GACGCCGGGGAGAACTTG 60.434 66.667 27.23 0.00 0.00 3.16
1154 4582 0.951558 CAACTTGGTGGTGGTACTGC 59.048 55.000 0.00 0.00 0.00 4.40
1616 5044 0.613012 ATTGGCAAGAACAGGGCTCC 60.613 55.000 5.96 0.00 0.00 4.70
1618 5046 0.407139 AGATTGGCAAGAACAGGGCT 59.593 50.000 5.96 0.00 0.00 5.19
1621 5049 0.449388 GCGAGATTGGCAAGAACAGG 59.551 55.000 5.96 0.00 0.00 4.00
1645 5073 0.633733 CACATCGAGAACACGTACGC 59.366 55.000 16.72 0.00 34.70 4.42
1680 5108 7.095816 CGGACACAAAAATAAAGAAATCCCAAC 60.096 37.037 0.00 0.00 0.00 3.77
1681 5109 6.926272 CGGACACAAAAATAAAGAAATCCCAA 59.074 34.615 0.00 0.00 0.00 4.12
1682 5110 6.451393 CGGACACAAAAATAAAGAAATCCCA 58.549 36.000 0.00 0.00 0.00 4.37
1685 5113 5.347635 GCCCGGACACAAAAATAAAGAAATC 59.652 40.000 0.73 0.00 0.00 2.17
1690 5118 3.574614 CTGCCCGGACACAAAAATAAAG 58.425 45.455 0.73 0.00 0.00 1.85
1952 5381 4.714308 TCAAGGTTCAACAAAATGGGAGTT 59.286 37.500 0.00 0.00 0.00 3.01
1992 5422 8.353684 AGTGACGATATTTCTTATCTAGTGGTG 58.646 37.037 0.00 0.00 35.49 4.17
2000 5433 7.693952 TGGCAAAAGTGACGATATTTCTTATC 58.306 34.615 0.00 0.00 34.30 1.75
2053 5488 5.244402 TCAGGTTCTTCGTAAATGGAGTACA 59.756 40.000 0.00 0.00 0.00 2.90
2054 5489 5.717119 TCAGGTTCTTCGTAAATGGAGTAC 58.283 41.667 0.00 0.00 0.00 2.73
2055 5490 5.988310 TCAGGTTCTTCGTAAATGGAGTA 57.012 39.130 0.00 0.00 0.00 2.59
2056 5491 4.884668 TCAGGTTCTTCGTAAATGGAGT 57.115 40.909 0.00 0.00 0.00 3.85
2127 5564 4.472691 TTCGACATCAAAGACAAAGCTG 57.527 40.909 0.00 0.00 0.00 4.24
2146 5583 6.020201 CCAAAAGTACAACGTTGTCCAATTTC 60.020 38.462 35.40 17.47 42.35 2.17
2188 5635 5.954752 TGCAATCAGAATTAAACCCCATACA 59.045 36.000 0.00 0.00 0.00 2.29
2194 5641 7.935338 CATATGTGCAATCAGAATTAAACCC 57.065 36.000 0.00 0.00 0.00 4.11
2433 5918 0.530744 CGAAGTTGGGACCGATCTCA 59.469 55.000 0.00 0.00 31.55 3.27
2514 6004 3.882288 TGCTAAGCATCAACACAACTGAA 59.118 39.130 0.00 0.00 31.71 3.02
2584 6074 4.393990 TGTGAATGCTATGCTGCTATATGC 59.606 41.667 0.00 0.00 43.25 3.14
2585 6075 5.642491 AGTGTGAATGCTATGCTGCTATATG 59.358 40.000 0.00 0.00 0.00 1.78
2586 6076 5.802465 AGTGTGAATGCTATGCTGCTATAT 58.198 37.500 0.00 0.00 0.00 0.86
2587 6077 5.219343 AGTGTGAATGCTATGCTGCTATA 57.781 39.130 0.00 0.00 0.00 1.31
2595 6085 6.263344 CCAATTCTGAAGTGTGAATGCTATG 58.737 40.000 15.63 0.00 33.72 2.23
2606 6096 3.996150 ACTTGTGCCAATTCTGAAGTG 57.004 42.857 10.66 10.66 0.00 3.16
2640 6134 2.158449 CACAGACTGTCGAAATCTTGGC 59.842 50.000 4.74 0.00 0.00 4.52
2642 6136 4.051237 TCACACAGACTGTCGAAATCTTG 58.949 43.478 4.74 0.00 0.00 3.02
2650 6144 5.164233 ACTGAATTATCACACAGACTGTCG 58.836 41.667 4.74 4.40 34.88 4.35
2657 6151 9.912634 AAATTAACCAACTGAATTATCACACAG 57.087 29.630 0.00 0.00 36.58 3.66
2682 6176 4.074259 CACAGAGGAATCCATTCACACAA 58.926 43.478 0.61 0.00 38.53 3.33
2688 6182 3.441572 CCAACACACAGAGGAATCCATTC 59.558 47.826 0.61 0.00 36.08 2.67
2942 6445 1.071567 GAGGTAAGCGAGACGTGTGC 61.072 60.000 0.00 0.00 0.00 4.57
2953 6456 0.242017 ACGTACGTGGTGAGGTAAGC 59.758 55.000 22.14 0.00 0.00 3.09
2973 6476 2.699846 TGGTTTGCTTGCTTCCTTCATT 59.300 40.909 0.00 0.00 0.00 2.57
2974 6477 2.298163 CTGGTTTGCTTGCTTCCTTCAT 59.702 45.455 0.00 0.00 0.00 2.57
2975 6478 1.682854 CTGGTTTGCTTGCTTCCTTCA 59.317 47.619 0.00 0.00 0.00 3.02
2976 6479 1.956477 TCTGGTTTGCTTGCTTCCTTC 59.044 47.619 0.00 0.00 0.00 3.46
3001 6511 6.402766 CGAGGTCAACAAAAGTTTCAGTGTTA 60.403 38.462 4.30 0.00 33.04 2.41
3186 7526 3.196469 AGAATTCAGAGACATCCGAGCAA 59.804 43.478 8.44 0.00 0.00 3.91
3235 7575 6.214191 TCTTTCACCTCTCTACATCATCAC 57.786 41.667 0.00 0.00 0.00 3.06
3256 7596 5.721000 TGGCAACTTTATTTGGATGGATTCT 59.279 36.000 0.00 0.00 37.61 2.40
3306 7646 3.383620 TGTTTTGGACCACGTACGTAT 57.616 42.857 22.34 12.55 0.00 3.06
3310 7650 2.033492 CGACTTGTTTTGGACCACGTAC 60.033 50.000 0.00 0.00 0.00 3.67
3457 7800 1.667722 GCAACAAGCAAGGGGAAGG 59.332 57.895 0.00 0.00 44.79 3.46
3492 7835 1.065854 CACAAGCCCCCAAACAAACAA 60.066 47.619 0.00 0.00 0.00 2.83
3493 7836 0.539051 CACAAGCCCCCAAACAAACA 59.461 50.000 0.00 0.00 0.00 2.83
3494 7837 0.813610 GCACAAGCCCCCAAACAAAC 60.814 55.000 0.00 0.00 33.58 2.93
3495 7838 0.980231 AGCACAAGCCCCCAAACAAA 60.980 50.000 0.00 0.00 43.56 2.83
3643 8089 0.179067 AGGCACCGAAAGAAACGTCA 60.179 50.000 0.00 0.00 0.00 4.35
3661 8107 3.687125 GGAGGTTTCCTACTCCCAAAAG 58.313 50.000 0.00 0.00 46.01 2.27
3724 8430 5.419542 TCGATATGAGGTTTCCAACTCTTG 58.580 41.667 0.00 0.00 34.84 3.02
3731 8437 4.592778 TCATGGATCGATATGAGGTTTCCA 59.407 41.667 6.75 4.17 36.32 3.53
3750 8456 3.887716 CTCCCCTAGAAAGCCATTTCATG 59.112 47.826 3.78 0.00 46.10 3.07
3758 8464 0.542333 GTGGACTCCCCTAGAAAGCC 59.458 60.000 0.00 0.00 35.38 4.35
3804 8513 4.012895 CGCCAACCGTGCTGTCAC 62.013 66.667 0.00 0.00 39.78 3.67
3851 8562 8.956426 CCATCTTAATACAACTTCCTGCTTTAA 58.044 33.333 0.00 0.00 0.00 1.52
3852 8563 7.556275 CCCATCTTAATACAACTTCCTGCTTTA 59.444 37.037 0.00 0.00 0.00 1.85
3853 8564 6.378280 CCCATCTTAATACAACTTCCTGCTTT 59.622 38.462 0.00 0.00 0.00 3.51
3854 8565 5.888161 CCCATCTTAATACAACTTCCTGCTT 59.112 40.000 0.00 0.00 0.00 3.91
3917 8628 3.627732 TTTCACTTCGCGGCATAAAAA 57.372 38.095 6.13 0.00 0.00 1.94
3918 8629 3.627732 TTTTCACTTCGCGGCATAAAA 57.372 38.095 6.13 4.81 0.00 1.52
3919 8630 3.438781 AGATTTTCACTTCGCGGCATAAA 59.561 39.130 6.13 0.34 0.00 1.40
3920 8631 3.006940 AGATTTTCACTTCGCGGCATAA 58.993 40.909 6.13 0.00 0.00 1.90
3921 8632 2.607635 GAGATTTTCACTTCGCGGCATA 59.392 45.455 6.13 0.00 0.00 3.14
3922 8633 1.398390 GAGATTTTCACTTCGCGGCAT 59.602 47.619 6.13 0.00 0.00 4.40
3923 8634 0.796312 GAGATTTTCACTTCGCGGCA 59.204 50.000 6.13 0.00 0.00 5.69
3924 8635 1.061276 GAGAGATTTTCACTTCGCGGC 59.939 52.381 6.13 0.00 0.00 6.53
3925 8636 1.661112 GGAGAGATTTTCACTTCGCGG 59.339 52.381 6.13 0.00 0.00 6.46
3926 8637 1.661112 GGGAGAGATTTTCACTTCGCG 59.339 52.381 0.00 0.00 0.00 5.87
3927 8638 2.699954 TGGGAGAGATTTTCACTTCGC 58.300 47.619 0.00 0.00 0.00 4.70
3928 8639 5.886960 AAATGGGAGAGATTTTCACTTCG 57.113 39.130 0.00 0.00 0.00 3.79
3929 8640 9.014297 TCTTAAAATGGGAGAGATTTTCACTTC 57.986 33.333 0.00 0.00 35.25 3.01
3930 8641 8.940397 TCTTAAAATGGGAGAGATTTTCACTT 57.060 30.769 0.00 0.00 35.25 3.16
3931 8642 7.613411 CCTCTTAAAATGGGAGAGATTTTCACT 59.387 37.037 1.40 0.00 39.36 3.41
3932 8643 7.611855 TCCTCTTAAAATGGGAGAGATTTTCAC 59.388 37.037 1.40 0.00 39.36 3.18
3933 8644 7.698912 TCCTCTTAAAATGGGAGAGATTTTCA 58.301 34.615 1.40 0.00 39.36 2.69
3934 8645 7.831690 ACTCCTCTTAAAATGGGAGAGATTTTC 59.168 37.037 13.78 0.00 45.79 2.29
3935 8646 7.613411 CACTCCTCTTAAAATGGGAGAGATTTT 59.387 37.037 13.78 0.00 45.79 1.82
3936 8647 7.115414 CACTCCTCTTAAAATGGGAGAGATTT 58.885 38.462 13.78 0.00 45.79 2.17
3937 8648 6.353429 CCACTCCTCTTAAAATGGGAGAGATT 60.353 42.308 13.78 0.00 45.79 2.40
3938 8649 5.131809 CCACTCCTCTTAAAATGGGAGAGAT 59.868 44.000 13.78 0.00 45.79 2.75
3939 8650 4.471386 CCACTCCTCTTAAAATGGGAGAGA 59.529 45.833 13.78 1.89 45.79 3.10
3940 8651 4.471386 TCCACTCCTCTTAAAATGGGAGAG 59.529 45.833 13.78 6.58 45.79 3.20
3941 8652 4.435137 TCCACTCCTCTTAAAATGGGAGA 58.565 43.478 13.78 0.00 45.79 3.71
3943 8654 4.079787 CCATCCACTCCTCTTAAAATGGGA 60.080 45.833 0.00 0.00 30.95 4.37
3944 8655 4.210331 CCATCCACTCCTCTTAAAATGGG 58.790 47.826 0.00 0.00 30.95 4.00
3945 8656 3.633986 GCCATCCACTCCTCTTAAAATGG 59.366 47.826 0.00 0.00 36.37 3.16
3946 8657 3.313526 CGCCATCCACTCCTCTTAAAATG 59.686 47.826 0.00 0.00 0.00 2.32
3947 8658 3.199946 TCGCCATCCACTCCTCTTAAAAT 59.800 43.478 0.00 0.00 0.00 1.82
3948 8659 2.569853 TCGCCATCCACTCCTCTTAAAA 59.430 45.455 0.00 0.00 0.00 1.52
3949 8660 2.093658 GTCGCCATCCACTCCTCTTAAA 60.094 50.000 0.00 0.00 0.00 1.52
3950 8661 1.480954 GTCGCCATCCACTCCTCTTAA 59.519 52.381 0.00 0.00 0.00 1.85
3951 8662 1.112113 GTCGCCATCCACTCCTCTTA 58.888 55.000 0.00 0.00 0.00 2.10
3952 8663 0.616111 AGTCGCCATCCACTCCTCTT 60.616 55.000 0.00 0.00 0.00 2.85
3953 8664 1.000993 AGTCGCCATCCACTCCTCT 59.999 57.895 0.00 0.00 0.00 3.69
3954 8665 1.439644 GAGTCGCCATCCACTCCTC 59.560 63.158 0.00 0.00 34.09 3.71
3955 8666 3.622514 GAGTCGCCATCCACTCCT 58.377 61.111 0.00 0.00 34.09 3.69
3957 8668 3.298958 TGGAGTCGCCATCCACTC 58.701 61.111 0.00 0.00 43.33 3.51
3981 8692 4.011517 TTCCCCGACGGTTGAGGC 62.012 66.667 13.94 0.00 0.00 4.70
3982 8693 2.047560 GTTCCCCGACGGTTGAGG 60.048 66.667 13.94 6.86 0.00 3.86
3983 8694 2.431942 CGTTCCCCGACGGTTGAG 60.432 66.667 13.94 0.00 39.27 3.02
3990 8701 2.847435 CTTACCTGCCGTTCCCCGAC 62.847 65.000 0.00 0.00 39.56 4.79
3991 8702 2.604079 TTACCTGCCGTTCCCCGA 60.604 61.111 0.00 0.00 39.56 5.14
3992 8703 2.125269 CTTACCTGCCGTTCCCCG 60.125 66.667 0.00 0.00 0.00 5.73
3993 8704 2.271173 CCTTACCTGCCGTTCCCC 59.729 66.667 0.00 0.00 0.00 4.81
3994 8705 2.271173 CCCTTACCTGCCGTTCCC 59.729 66.667 0.00 0.00 0.00 3.97
3995 8706 1.078637 GACCCTTACCTGCCGTTCC 60.079 63.158 0.00 0.00 0.00 3.62
3996 8707 1.447314 CGACCCTTACCTGCCGTTC 60.447 63.158 0.00 0.00 0.00 3.95
3997 8708 2.660802 CGACCCTTACCTGCCGTT 59.339 61.111 0.00 0.00 0.00 4.44
3998 8709 3.387947 CCGACCCTTACCTGCCGT 61.388 66.667 0.00 0.00 0.00 5.68
3999 8710 2.459202 AAACCGACCCTTACCTGCCG 62.459 60.000 0.00 0.00 0.00 5.69
4000 8711 0.251033 AAAACCGACCCTTACCTGCC 60.251 55.000 0.00 0.00 0.00 4.85
4001 8712 0.879090 CAAAACCGACCCTTACCTGC 59.121 55.000 0.00 0.00 0.00 4.85
4002 8713 1.530323 CCAAAACCGACCCTTACCTG 58.470 55.000 0.00 0.00 0.00 4.00
4003 8714 0.402887 CCCAAAACCGACCCTTACCT 59.597 55.000 0.00 0.00 0.00 3.08
4004 8715 1.246056 GCCCAAAACCGACCCTTACC 61.246 60.000 0.00 0.00 0.00 2.85
4005 8716 1.579964 CGCCCAAAACCGACCCTTAC 61.580 60.000 0.00 0.00 0.00 2.34
4006 8717 1.302671 CGCCCAAAACCGACCCTTA 60.303 57.895 0.00 0.00 0.00 2.69
4007 8718 2.596338 CGCCCAAAACCGACCCTT 60.596 61.111 0.00 0.00 0.00 3.95
4010 8721 4.038080 CAGCGCCCAAAACCGACC 62.038 66.667 2.29 0.00 0.00 4.79
4011 8722 4.038080 CCAGCGCCCAAAACCGAC 62.038 66.667 2.29 0.00 0.00 4.79
4012 8723 3.179888 TACCAGCGCCCAAAACCGA 62.180 57.895 2.29 0.00 0.00 4.69
4013 8724 2.670251 TACCAGCGCCCAAAACCG 60.670 61.111 2.29 0.00 0.00 4.44
4014 8725 1.302993 TCTACCAGCGCCCAAAACC 60.303 57.895 2.29 0.00 0.00 3.27
4015 8726 1.873863 GTCTACCAGCGCCCAAAAC 59.126 57.895 2.29 0.00 0.00 2.43
4016 8727 1.669760 CGTCTACCAGCGCCCAAAA 60.670 57.895 2.29 0.00 0.00 2.44
4017 8728 2.047655 CGTCTACCAGCGCCCAAA 60.048 61.111 2.29 0.00 0.00 3.28
4018 8729 2.992689 TCGTCTACCAGCGCCCAA 60.993 61.111 2.29 0.00 0.00 4.12
4019 8730 3.755628 GTCGTCTACCAGCGCCCA 61.756 66.667 2.29 0.00 0.00 5.36
4020 8731 4.849329 CGTCGTCTACCAGCGCCC 62.849 72.222 2.29 0.00 0.00 6.13
4024 8735 4.849329 CCGGCGTCGTCTACCAGC 62.849 72.222 9.28 0.00 33.95 4.85
4025 8736 3.437795 ACCGGCGTCGTCTACCAG 61.438 66.667 9.28 0.00 33.95 4.00
4026 8737 3.740397 CACCGGCGTCGTCTACCA 61.740 66.667 9.28 0.00 33.95 3.25
4027 8738 3.434319 TCACCGGCGTCGTCTACC 61.434 66.667 9.28 0.00 33.95 3.18
4028 8739 2.202401 GTCACCGGCGTCGTCTAC 60.202 66.667 9.28 0.00 33.95 2.59
4029 8740 2.359107 AGTCACCGGCGTCGTCTA 60.359 61.111 9.28 0.00 33.95 2.59
4030 8741 3.735029 GAGTCACCGGCGTCGTCT 61.735 66.667 9.28 0.56 33.95 4.18
4039 8750 2.745100 TCGTCCTCCGAGTCACCG 60.745 66.667 0.00 0.00 41.60 4.94
4049 8760 4.131088 GTCACCGCCCTCGTCCTC 62.131 72.222 0.00 0.00 0.00 3.71
4050 8761 4.680537 AGTCACCGCCCTCGTCCT 62.681 66.667 0.00 0.00 0.00 3.85
4051 8762 4.131088 GAGTCACCGCCCTCGTCC 62.131 72.222 0.00 0.00 0.00 4.79
4052 8763 4.477975 CGAGTCACCGCCCTCGTC 62.478 72.222 0.00 0.00 44.14 4.20
4055 8766 4.131088 GTCCGAGTCACCGCCCTC 62.131 72.222 0.00 0.00 0.00 4.30
4069 8780 4.754667 GGTGGTTCCTCGCCGTCC 62.755 72.222 0.00 0.00 0.00 4.79
4070 8781 3.998672 TGGTGGTTCCTCGCCGTC 61.999 66.667 0.00 0.00 40.02 4.79
4071 8782 4.309950 GTGGTGGTTCCTCGCCGT 62.310 66.667 0.00 0.00 40.02 5.68
4075 8786 3.622826 ACCGGTGGTGGTTCCTCG 61.623 66.667 6.12 0.00 39.99 4.63
4105 8816 3.554692 CAGATTGCGTCCGACGGC 61.555 66.667 21.84 14.26 42.82 5.68
4106 8817 3.554692 GCAGATTGCGTCCGACGG 61.555 66.667 21.84 7.84 42.82 4.79
4115 8826 2.401195 GAACGCCTCGCAGATTGC 59.599 61.111 0.00 0.00 40.69 3.56
4116 8827 3.093278 GGAACGCCTCGCAGATTG 58.907 61.111 0.00 0.00 33.89 2.67
4132 8843 1.776662 TCTCAGAGTATCCAACCCGG 58.223 55.000 0.00 0.00 33.66 5.73
4133 8844 2.479730 CGTTCTCAGAGTATCCAACCCG 60.480 54.545 0.00 0.00 33.66 5.28
4134 8845 2.758979 TCGTTCTCAGAGTATCCAACCC 59.241 50.000 0.00 0.00 33.66 4.11
4135 8846 3.181485 CCTCGTTCTCAGAGTATCCAACC 60.181 52.174 0.00 0.00 33.66 3.77
4136 8847 3.444388 ACCTCGTTCTCAGAGTATCCAAC 59.556 47.826 0.00 0.00 33.66 3.77
4137 8848 3.444034 CACCTCGTTCTCAGAGTATCCAA 59.556 47.826 0.00 0.00 33.66 3.53
4138 8849 3.017442 CACCTCGTTCTCAGAGTATCCA 58.983 50.000 0.00 0.00 33.66 3.41
4139 8850 2.359531 CCACCTCGTTCTCAGAGTATCC 59.640 54.545 0.00 0.00 33.66 2.59
4140 8851 2.223618 GCCACCTCGTTCTCAGAGTATC 60.224 54.545 0.00 0.00 34.08 2.24
4141 8852 1.751924 GCCACCTCGTTCTCAGAGTAT 59.248 52.381 0.00 0.00 34.08 2.12
4142 8853 1.174783 GCCACCTCGTTCTCAGAGTA 58.825 55.000 0.00 0.00 34.08 2.59
4143 8854 1.867919 CGCCACCTCGTTCTCAGAGT 61.868 60.000 0.00 0.00 34.08 3.24
4144 8855 1.153939 CGCCACCTCGTTCTCAGAG 60.154 63.158 0.00 0.00 35.60 3.35
4145 8856 1.901948 ACGCCACCTCGTTCTCAGA 60.902 57.895 0.00 0.00 40.07 3.27
4146 8857 2.651361 ACGCCACCTCGTTCTCAG 59.349 61.111 0.00 0.00 40.07 3.35
4152 8863 2.972505 CAAGCAACGCCACCTCGT 60.973 61.111 0.00 0.00 45.58 4.18
4153 8864 2.542907 AACAAGCAACGCCACCTCG 61.543 57.895 0.00 0.00 0.00 4.63
4154 8865 1.008538 CAACAAGCAACGCCACCTC 60.009 57.895 0.00 0.00 0.00 3.85
4155 8866 1.453015 TCAACAAGCAACGCCACCT 60.453 52.632 0.00 0.00 0.00 4.00
4156 8867 1.299089 GTCAACAAGCAACGCCACC 60.299 57.895 0.00 0.00 0.00 4.61
4157 8868 1.299089 GGTCAACAAGCAACGCCAC 60.299 57.895 0.00 0.00 0.00 5.01
4158 8869 1.453015 AGGTCAACAAGCAACGCCA 60.453 52.632 0.00 0.00 0.00 5.69
4159 8870 1.008538 CAGGTCAACAAGCAACGCC 60.009 57.895 0.00 0.00 0.00 5.68
4160 8871 1.008538 CCAGGTCAACAAGCAACGC 60.009 57.895 0.00 0.00 0.00 4.84
4161 8872 0.029300 CACCAGGTCAACAAGCAACG 59.971 55.000 0.00 0.00 0.00 4.10
4162 8873 1.388547 TCACCAGGTCAACAAGCAAC 58.611 50.000 0.00 0.00 0.00 4.17
4163 8874 2.229792 GATCACCAGGTCAACAAGCAA 58.770 47.619 0.00 0.00 0.00 3.91
4164 8875 1.545428 GGATCACCAGGTCAACAAGCA 60.545 52.381 0.00 0.00 35.97 3.91
4165 8876 1.168714 GGATCACCAGGTCAACAAGC 58.831 55.000 0.00 0.00 35.97 4.01
4166 8877 1.352352 AGGGATCACCAGGTCAACAAG 59.648 52.381 0.00 0.00 43.89 3.16
4167 8878 1.351017 GAGGGATCACCAGGTCAACAA 59.649 52.381 0.00 0.00 43.89 2.83
4168 8879 0.984230 GAGGGATCACCAGGTCAACA 59.016 55.000 0.00 0.00 43.89 3.33
4169 8880 0.108138 CGAGGGATCACCAGGTCAAC 60.108 60.000 0.00 0.00 43.89 3.18
4170 8881 1.899437 GCGAGGGATCACCAGGTCAA 61.899 60.000 0.00 0.00 43.89 3.18
4171 8882 2.359169 GCGAGGGATCACCAGGTCA 61.359 63.158 0.00 0.00 43.89 4.02
4172 8883 2.501610 GCGAGGGATCACCAGGTC 59.498 66.667 0.00 0.00 43.89 3.85
4173 8884 3.461773 CGCGAGGGATCACCAGGT 61.462 66.667 0.00 0.00 43.89 4.00
4174 8885 3.147595 TCGCGAGGGATCACCAGG 61.148 66.667 3.71 0.00 43.89 4.45
4175 8886 2.105128 GTCGCGAGGGATCACCAG 59.895 66.667 10.24 0.00 43.89 4.00
4176 8887 3.822192 CGTCGCGAGGGATCACCA 61.822 66.667 20.58 0.00 43.89 4.17
4177 8888 2.734756 GATCGTCGCGAGGGATCACC 62.735 65.000 30.46 14.62 39.91 4.02
4178 8889 1.370657 GATCGTCGCGAGGGATCAC 60.371 63.158 30.46 15.15 39.91 3.06
4179 8890 2.552819 GGATCGTCGCGAGGGATCA 61.553 63.158 33.38 17.65 39.91 2.92
4180 8891 2.255856 GGATCGTCGCGAGGGATC 59.744 66.667 28.84 28.84 39.91 3.36
4181 8892 3.661131 CGGATCGTCGCGAGGGAT 61.661 66.667 26.64 22.75 39.91 3.85
4190 8901 4.933064 CAGCCTCGCCGGATCGTC 62.933 72.222 5.05 0.00 33.16 4.20
4198 8909 3.672295 CTTCAGTCCCAGCCTCGCC 62.672 68.421 0.00 0.00 0.00 5.54
4199 8910 2.125350 CTTCAGTCCCAGCCTCGC 60.125 66.667 0.00 0.00 0.00 5.03
4200 8911 1.954362 CTCCTTCAGTCCCAGCCTCG 61.954 65.000 0.00 0.00 0.00 4.63
4201 8912 1.621672 CCTCCTTCAGTCCCAGCCTC 61.622 65.000 0.00 0.00 0.00 4.70
4202 8913 1.614824 CCTCCTTCAGTCCCAGCCT 60.615 63.158 0.00 0.00 0.00 4.58
4203 8914 1.613630 TCCTCCTTCAGTCCCAGCC 60.614 63.158 0.00 0.00 0.00 4.85
4204 8915 1.621672 CCTCCTCCTTCAGTCCCAGC 61.622 65.000 0.00 0.00 0.00 4.85
4205 8916 0.041833 TCCTCCTCCTTCAGTCCCAG 59.958 60.000 0.00 0.00 0.00 4.45
4206 8917 0.252284 GTCCTCCTCCTTCAGTCCCA 60.252 60.000 0.00 0.00 0.00 4.37
4207 8918 0.252284 TGTCCTCCTCCTTCAGTCCC 60.252 60.000 0.00 0.00 0.00 4.46
4208 8919 1.190643 CTGTCCTCCTCCTTCAGTCC 58.809 60.000 0.00 0.00 0.00 3.85
4209 8920 0.534873 GCTGTCCTCCTCCTTCAGTC 59.465 60.000 0.00 0.00 0.00 3.51
4210 8921 1.254284 CGCTGTCCTCCTCCTTCAGT 61.254 60.000 0.00 0.00 0.00 3.41
4211 8922 1.254284 ACGCTGTCCTCCTCCTTCAG 61.254 60.000 0.00 0.00 0.00 3.02
4212 8923 1.228894 ACGCTGTCCTCCTCCTTCA 60.229 57.895 0.00 0.00 0.00 3.02
4213 8924 1.513622 GACGCTGTCCTCCTCCTTC 59.486 63.158 0.00 0.00 0.00 3.46
4214 8925 2.344203 CGACGCTGTCCTCCTCCTT 61.344 63.158 3.65 0.00 0.00 3.36
4215 8926 2.752238 CGACGCTGTCCTCCTCCT 60.752 66.667 3.65 0.00 0.00 3.69
4216 8927 2.750637 TCGACGCTGTCCTCCTCC 60.751 66.667 0.00 0.00 0.00 4.30
4217 8928 1.098712 ATCTCGACGCTGTCCTCCTC 61.099 60.000 0.00 0.00 0.00 3.71
4218 8929 0.180642 TATCTCGACGCTGTCCTCCT 59.819 55.000 0.00 0.00 0.00 3.69
4219 8930 0.589223 CTATCTCGACGCTGTCCTCC 59.411 60.000 0.00 0.00 0.00 4.30
4220 8931 1.301423 ACTATCTCGACGCTGTCCTC 58.699 55.000 0.00 0.00 0.00 3.71
4221 8932 1.671845 GAACTATCTCGACGCTGTCCT 59.328 52.381 0.00 0.00 0.00 3.85
4222 8933 1.595003 CGAACTATCTCGACGCTGTCC 60.595 57.143 0.00 0.00 41.44 4.02
4223 8934 1.732528 CGAACTATCTCGACGCTGTC 58.267 55.000 0.00 0.00 41.44 3.51
4224 8935 0.248134 GCGAACTATCTCGACGCTGT 60.248 55.000 7.02 0.00 44.67 4.40
4225 8936 0.930742 GGCGAACTATCTCGACGCTG 60.931 60.000 12.97 0.00 46.71 5.18
4226 8937 1.355916 GGCGAACTATCTCGACGCT 59.644 57.895 12.97 0.00 46.71 5.07
4227 8938 3.905060 GGCGAACTATCTCGACGC 58.095 61.111 5.84 5.84 46.79 5.19
4229 8940 1.657794 GGCGGCGAACTATCTCGAC 60.658 63.158 12.98 0.00 43.71 4.20
4230 8941 1.783031 GAGGCGGCGAACTATCTCGA 61.783 60.000 12.98 0.00 41.44 4.04
4231 8942 1.370657 GAGGCGGCGAACTATCTCG 60.371 63.158 12.98 0.00 41.84 4.04
4232 8943 1.370657 CGAGGCGGCGAACTATCTC 60.371 63.158 12.98 5.95 0.00 2.75
4233 8944 2.061182 GACGAGGCGGCGAACTATCT 62.061 60.000 12.98 0.00 34.83 1.98
4234 8945 1.657794 GACGAGGCGGCGAACTATC 60.658 63.158 12.98 5.60 34.83 2.08
4235 8946 2.412112 GACGAGGCGGCGAACTAT 59.588 61.111 12.98 0.00 34.83 2.12
4236 8947 3.818787 GGACGAGGCGGCGAACTA 61.819 66.667 12.98 0.00 34.63 2.24
4238 8949 4.814294 ATGGACGAGGCGGCGAAC 62.814 66.667 12.98 1.56 34.63 3.95
4239 8950 4.077184 AATGGACGAGGCGGCGAA 62.077 61.111 12.98 0.00 34.63 4.70
4240 8951 4.812476 CAATGGACGAGGCGGCGA 62.812 66.667 12.98 0.00 34.63 5.54
4242 8953 3.195698 GACAATGGACGAGGCGGC 61.196 66.667 0.00 0.00 0.00 6.53
4243 8954 2.885644 CGACAATGGACGAGGCGG 60.886 66.667 0.00 0.00 34.07 6.13
4244 8955 3.554692 GCGACAATGGACGAGGCG 61.555 66.667 0.00 0.00 34.07 5.52
4245 8956 2.434185 TGCGACAATGGACGAGGC 60.434 61.111 0.00 0.00 34.07 4.70
4246 8957 3.474806 GTGCGACAATGGACGAGG 58.525 61.111 0.00 0.00 34.07 4.63
4274 8985 4.962836 CATGCCAGGCCGGATCCC 62.963 72.222 16.53 0.00 36.56 3.85
4275 8986 4.962836 CCATGCCAGGCCGGATCC 62.963 72.222 16.53 0.00 36.56 3.36
4276 8987 4.195334 ACCATGCCAGGCCGGATC 62.195 66.667 21.43 0.00 36.56 3.36
4277 8988 4.195334 GACCATGCCAGGCCGGAT 62.195 66.667 21.43 7.67 36.56 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.