Multiple sequence alignment - TraesCS2A01G220000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G220000 chr2A 100.000 2896 0 0 1 2896 207580732 207583627 0.000000e+00 5349
1 TraesCS2A01G220000 chr2D 95.484 1063 36 4 930 1981 193343862 193344923 0.000000e+00 1687
2 TraesCS2A01G220000 chr2D 90.981 754 47 11 1 737 193342978 193343727 0.000000e+00 996
3 TraesCS2A01G220000 chr2D 86.494 348 40 5 2150 2491 193346051 193346397 2.720000e-100 375
4 TraesCS2A01G220000 chr2D 89.437 284 24 6 2483 2761 193390204 193390486 1.280000e-93 353
5 TraesCS2A01G220000 chr2D 87.310 197 15 6 1966 2159 193345804 193345993 1.750000e-52 217
6 TraesCS2A01G220000 chr2B 91.557 758 39 15 1 737 249464064 249464817 0.000000e+00 1022
7 TraesCS2A01G220000 chr2B 93.578 436 28 0 1350 1785 249465330 249465765 0.000000e+00 651
8 TraesCS2A01G220000 chr2B 95.601 341 12 1 930 1270 249464983 249465320 7.060000e-151 544
9 TraesCS2A01G220000 chr1D 100.000 104 0 0 2793 2896 435763813 435763710 2.940000e-45 193
10 TraesCS2A01G220000 chr5A 99.038 104 1 0 2793 2896 41983913 41984016 1.370000e-43 187
11 TraesCS2A01G220000 chr3D 99.038 104 1 0 2793 2896 84970995 84970892 1.370000e-43 187
12 TraesCS2A01G220000 chr3D 98.077 104 2 0 2793 2896 290743891 290743994 6.370000e-42 182
13 TraesCS2A01G220000 chr3D 97.059 102 3 0 2793 2894 164552228 164552329 3.840000e-39 172
14 TraesCS2A01G220000 chr7D 98.077 104 2 0 2793 2896 566569674 566569777 6.370000e-42 182
15 TraesCS2A01G220000 chr6D 99.010 101 1 0 2796 2896 316890519 316890419 6.370000e-42 182
16 TraesCS2A01G220000 chr3B 98.077 104 2 0 2793 2896 30522248 30522351 6.370000e-42 182
17 TraesCS2A01G220000 chr3B 97.115 104 3 0 2793 2896 373783585 373783688 2.970000e-40 176


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G220000 chr2A 207580732 207583627 2895 False 5349.00 5349 100.000000 1 2896 1 chr2A.!!$F1 2895
1 TraesCS2A01G220000 chr2D 193342978 193346397 3419 False 818.75 1687 90.067250 1 2491 4 chr2D.!!$F2 2490
2 TraesCS2A01G220000 chr2B 249464064 249465765 1701 False 739.00 1022 93.578667 1 1785 3 chr2B.!!$F1 1784

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
935 1017 0.036388 TAGCACTAACAGGCCAGCAC 60.036 55.0 5.01 0.0 0.0 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2013 3002 0.030235 CTGCCACGGATGCATGAATG 59.97 55.0 2.46 0.0 38.22 2.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.727798 ACGTTTACTCAATTCGACGTGG 59.272 45.455 0.00 0.00 41.49 4.94
39 40 2.125673 AATTCGACGTGGCCTCCG 60.126 61.111 3.32 9.27 0.00 4.63
40 41 4.814294 ATTCGACGTGGCCTCCGC 62.814 66.667 14.17 7.32 0.00 5.54
243 244 3.113514 TTGCAGGCGGACAAGGTGA 62.114 57.895 0.00 0.00 0.00 4.02
261 262 1.173043 GATGTTCACGCCCCAATTCA 58.827 50.000 0.00 0.00 0.00 2.57
368 369 1.243342 TGCTGGGGACGCTCAAAATG 61.243 55.000 0.00 0.00 0.00 2.32
381 382 0.677731 CAAAATGAGGGCCAGCTCGA 60.678 55.000 6.18 0.00 0.00 4.04
512 517 1.920574 CACGGCGTGTCTATCAAGAAG 59.079 52.381 30.56 0.95 32.16 2.85
527 532 3.321111 TCAAGAAGTGTGGGAGTGAGTAC 59.679 47.826 0.00 0.00 0.00 2.73
629 649 6.036735 ACGTAATTAAGCGCACTCATACAATT 59.963 34.615 11.47 5.60 0.00 2.32
635 655 6.771188 AAGCGCACTCATACAATTAGTATC 57.229 37.500 11.47 0.00 41.47 2.24
638 658 5.059832 GCGCACTCATACAATTAGTATCTCG 59.940 44.000 0.30 0.00 41.47 4.04
648 668 1.091197 TAGTATCTCGCCGCGTGTGA 61.091 55.000 13.39 8.02 0.00 3.58
700 724 9.107177 GAGAATGCAGAGAAAAATAAGAGATGA 57.893 33.333 0.00 0.00 0.00 2.92
701 725 9.629878 AGAATGCAGAGAAAAATAAGAGATGAT 57.370 29.630 0.00 0.00 0.00 2.45
702 726 9.666626 GAATGCAGAGAAAAATAAGAGATGATG 57.333 33.333 0.00 0.00 0.00 3.07
721 745 6.653526 TGATGTTCTTGACAAAATCCACAT 57.346 33.333 0.00 0.00 42.62 3.21
722 746 7.053316 TGATGTTCTTGACAAAATCCACATT 57.947 32.000 0.00 0.00 42.62 2.71
726 750 4.619973 TCTTGACAAAATCCACATTGCAC 58.380 39.130 0.00 0.00 0.00 4.57
759 833 4.374112 GCGAATCGTTCTCAAATACTAGCG 60.374 45.833 4.07 0.00 0.00 4.26
773 849 2.893637 ACTAGCGCAAATTCGAGACAT 58.106 42.857 11.47 0.00 0.00 3.06
780 856 4.650985 CGCAAATTCGAGACATCAAATCA 58.349 39.130 0.00 0.00 0.00 2.57
784 860 6.414109 GCAAATTCGAGACATCAAATCATCAG 59.586 38.462 0.00 0.00 0.00 2.90
785 861 5.670149 ATTCGAGACATCAAATCATCAGC 57.330 39.130 0.00 0.00 0.00 4.26
786 862 3.461061 TCGAGACATCAAATCATCAGCC 58.539 45.455 0.00 0.00 0.00 4.85
787 863 3.118665 TCGAGACATCAAATCATCAGCCA 60.119 43.478 0.00 0.00 0.00 4.75
789 865 4.319549 CGAGACATCAAATCATCAGCCATG 60.320 45.833 0.00 0.00 0.00 3.66
790 866 4.788679 AGACATCAAATCATCAGCCATGA 58.211 39.130 0.00 0.00 46.01 3.07
804 880 6.381481 TCAGCCATGATGTTTGATGAATAC 57.619 37.500 0.00 0.00 0.00 1.89
805 881 6.124340 TCAGCCATGATGTTTGATGAATACT 58.876 36.000 0.00 0.00 0.00 2.12
806 882 6.261603 TCAGCCATGATGTTTGATGAATACTC 59.738 38.462 0.00 0.00 0.00 2.59
807 883 5.533903 AGCCATGATGTTTGATGAATACTCC 59.466 40.000 0.00 0.00 0.00 3.85
808 884 5.533903 GCCATGATGTTTGATGAATACTCCT 59.466 40.000 0.00 0.00 0.00 3.69
809 885 6.712095 GCCATGATGTTTGATGAATACTCCTA 59.288 38.462 0.00 0.00 0.00 2.94
810 886 7.094890 GCCATGATGTTTGATGAATACTCCTAG 60.095 40.741 0.00 0.00 0.00 3.02
811 887 8.152898 CCATGATGTTTGATGAATACTCCTAGA 58.847 37.037 0.00 0.00 0.00 2.43
812 888 9.722184 CATGATGTTTGATGAATACTCCTAGAT 57.278 33.333 0.00 0.00 0.00 1.98
815 891 9.868277 GATGTTTGATGAATACTCCTAGATAGG 57.132 37.037 0.00 0.00 45.02 2.57
859 935 7.556733 AAAAGAATGCAACAATGTTCATTGT 57.443 28.000 20.87 20.87 45.75 2.71
873 949 2.147958 TCATTGTTGTGAACTACGGGC 58.852 47.619 0.00 0.00 0.00 6.13
874 950 1.876799 CATTGTTGTGAACTACGGGCA 59.123 47.619 0.00 0.00 0.00 5.36
875 951 1.301423 TTGTTGTGAACTACGGGCAC 58.699 50.000 0.00 0.00 0.00 5.01
876 952 0.178301 TGTTGTGAACTACGGGCACA 59.822 50.000 0.00 0.00 40.44 4.57
877 953 1.202710 TGTTGTGAACTACGGGCACAT 60.203 47.619 0.00 0.00 41.60 3.21
878 954 1.196808 GTTGTGAACTACGGGCACATG 59.803 52.381 0.00 0.00 41.60 3.21
879 955 0.682292 TGTGAACTACGGGCACATGA 59.318 50.000 0.00 0.00 37.60 3.07
880 956 1.337728 TGTGAACTACGGGCACATGAG 60.338 52.381 0.00 0.00 37.60 2.90
916 998 2.649816 ACCCCCACTAAGCTTCAATTCT 59.350 45.455 0.00 0.00 0.00 2.40
924 1006 6.818644 CCACTAAGCTTCAATTCTAGCACTAA 59.181 38.462 0.00 0.00 39.85 2.24
925 1007 7.201565 CCACTAAGCTTCAATTCTAGCACTAAC 60.202 40.741 0.00 0.00 39.85 2.34
926 1008 7.331934 CACTAAGCTTCAATTCTAGCACTAACA 59.668 37.037 0.00 0.00 39.85 2.41
927 1009 6.734104 AAGCTTCAATTCTAGCACTAACAG 57.266 37.500 10.13 0.00 39.85 3.16
928 1010 5.181748 AGCTTCAATTCTAGCACTAACAGG 58.818 41.667 10.13 0.00 39.85 4.00
929 1011 4.201861 GCTTCAATTCTAGCACTAACAGGC 60.202 45.833 3.94 0.00 37.35 4.85
930 1012 3.873910 TCAATTCTAGCACTAACAGGCC 58.126 45.455 0.00 0.00 0.00 5.19
931 1013 3.263170 TCAATTCTAGCACTAACAGGCCA 59.737 43.478 5.01 0.00 0.00 5.36
932 1014 3.550437 ATTCTAGCACTAACAGGCCAG 57.450 47.619 5.01 0.00 0.00 4.85
933 1015 0.537188 TCTAGCACTAACAGGCCAGC 59.463 55.000 5.01 0.00 0.00 4.85
934 1016 0.250234 CTAGCACTAACAGGCCAGCA 59.750 55.000 5.01 0.00 0.00 4.41
935 1017 0.036388 TAGCACTAACAGGCCAGCAC 60.036 55.000 5.01 0.00 0.00 4.40
936 1018 1.302832 GCACTAACAGGCCAGCACT 60.303 57.895 5.01 0.00 0.00 4.40
937 1019 0.036388 GCACTAACAGGCCAGCACTA 60.036 55.000 5.01 0.00 0.00 2.74
938 1020 1.610624 GCACTAACAGGCCAGCACTAA 60.611 52.381 5.01 0.00 0.00 2.24
946 1028 2.095853 CAGGCCAGCACTAATAACAACG 59.904 50.000 5.01 0.00 0.00 4.10
1040 1122 0.469494 TCTTCCAGACAACTGCTGCA 59.531 50.000 0.88 0.88 42.25 4.41
1253 1335 4.821589 CTTCTCCCTGGCCGTCGC 62.822 72.222 0.00 0.00 0.00 5.19
1567 1649 1.336795 CGTGCAGTGTCATCCTGTACA 60.337 52.381 10.76 0.00 43.21 2.90
1604 1686 2.267006 CTCGCACTGCACCTCCAT 59.733 61.111 1.11 0.00 0.00 3.41
1617 1699 2.047655 TCCATGGTTCGCGTCACC 60.048 61.111 19.46 19.46 34.52 4.02
1630 1712 0.376152 CGTCACCTGAATGCATGAGC 59.624 55.000 0.00 0.00 42.57 4.26
1676 1758 1.609555 CGGTGATGCCTCTAGTCTACC 59.390 57.143 0.00 0.00 34.25 3.18
1818 1908 8.902735 GTTTTGCTGTTATTTAGAGTTAACTGC 58.097 33.333 14.14 6.57 45.65 4.40
1927 2020 1.153745 CCTGTGTACTCTGGAGCGC 60.154 63.158 13.87 0.00 0.00 5.92
1997 2986 7.575414 TTTTGAAAAAGCCCCCTTTATTTTC 57.425 32.000 0.00 0.00 40.30 2.29
2039 3028 2.434884 ATCCGTGGCAGCTGAACG 60.435 61.111 26.49 26.49 37.07 3.95
2052 3041 1.870993 GCTGAACGACCGTACCTTTGT 60.871 52.381 0.00 0.00 0.00 2.83
2060 3049 3.488047 CGACCGTACCTTTGTGATACGAT 60.488 47.826 4.69 0.00 43.37 3.73
2066 3055 1.217882 CTTTGTGATACGATCCCCGC 58.782 55.000 0.00 0.00 43.32 6.13
2106 3095 3.381136 CCCCATGCCACCCAAACG 61.381 66.667 0.00 0.00 0.00 3.60
2108 3097 4.067913 CCATGCCACCCAAACGCC 62.068 66.667 0.00 0.00 0.00 5.68
2114 3103 1.073199 CCACCCAAACGCCTCTTCT 59.927 57.895 0.00 0.00 0.00 2.85
2118 3107 1.291877 CCCAAACGCCTCTTCTGTCG 61.292 60.000 0.00 0.00 0.00 4.35
2142 3131 0.307146 CGAGGATTACGACGTCCCTC 59.693 60.000 21.35 21.35 39.88 4.30
2147 3136 0.731417 ATTACGACGTCCCTCGACAG 59.269 55.000 10.58 0.00 42.86 3.51
2188 3247 1.613925 TCAGCTCGTGATAGGGCATAC 59.386 52.381 0.00 0.00 0.00 2.39
2191 3250 1.666311 GCTCGTGATAGGGCATACGAC 60.666 57.143 0.00 0.00 40.21 4.34
2193 3252 0.589708 CGTGATAGGGCATACGACGA 59.410 55.000 0.00 0.00 38.72 4.20
2202 3261 2.184830 CATACGACGAGCGGAGGGA 61.185 63.158 0.00 0.00 46.49 4.20
2236 3295 4.574828 CACAATACAATAAGAACCCCTCGG 59.425 45.833 0.00 0.00 0.00 4.63
2259 3318 7.026562 CGGCAACAAAATCACTACATTTGATA 58.973 34.615 4.65 0.00 37.46 2.15
2276 3335 9.912634 ACATTTGATAGTTTTGGTACTCAATTG 57.087 29.630 0.00 0.00 34.98 2.32
2294 3353 3.536158 TTGTGAGCAATTAGACAACGC 57.464 42.857 0.00 0.00 0.00 4.84
2296 3355 3.138304 TGTGAGCAATTAGACAACGCTT 58.862 40.909 0.00 0.00 31.86 4.68
2297 3356 3.563808 TGTGAGCAATTAGACAACGCTTT 59.436 39.130 0.00 0.00 31.86 3.51
2302 3361 4.216257 AGCAATTAGACAACGCTTTGACAT 59.784 37.500 10.27 0.00 36.48 3.06
2345 3405 5.545658 TTAATTTGAGCTCGTTTGCCTAG 57.454 39.130 9.64 0.00 0.00 3.02
2354 3414 4.760204 AGCTCGTTTGCCTAGTGTTTAATT 59.240 37.500 0.00 0.00 0.00 1.40
2355 3415 4.851558 GCTCGTTTGCCTAGTGTTTAATTG 59.148 41.667 0.00 0.00 0.00 2.32
2356 3416 5.562113 GCTCGTTTGCCTAGTGTTTAATTGT 60.562 40.000 0.00 0.00 0.00 2.71
2360 3420 8.231837 TCGTTTGCCTAGTGTTTAATTGTAATC 58.768 33.333 0.00 0.00 0.00 1.75
2361 3421 8.018520 CGTTTGCCTAGTGTTTAATTGTAATCA 58.981 33.333 0.00 0.00 0.00 2.57
2398 3458 7.111593 GTCGACTGTGTTAAAGCTTTGTATTTG 59.888 37.037 22.02 10.07 0.00 2.32
2399 3459 6.129457 CGACTGTGTTAAAGCTTTGTATTTGC 60.129 38.462 22.02 6.05 0.00 3.68
2400 3460 6.805713 ACTGTGTTAAAGCTTTGTATTTGCT 58.194 32.000 22.02 0.00 38.87 3.91
2401 3461 7.936584 ACTGTGTTAAAGCTTTGTATTTGCTA 58.063 30.769 22.02 0.00 35.85 3.49
2402 3462 8.076178 ACTGTGTTAAAGCTTTGTATTTGCTAG 58.924 33.333 22.02 10.06 35.85 3.42
2403 3463 7.936584 TGTGTTAAAGCTTTGTATTTGCTAGT 58.063 30.769 22.02 0.00 35.85 2.57
2414 3475 9.559958 CTTTGTATTTGCTAGTTTAACAGATGG 57.440 33.333 0.00 0.00 0.00 3.51
2416 3477 8.492673 TGTATTTGCTAGTTTAACAGATGGAG 57.507 34.615 0.00 0.00 0.00 3.86
2431 3492 1.460504 TGGAGGCAGTGAGTACTACG 58.539 55.000 0.00 0.00 34.74 3.51
2433 3494 0.100861 GAGGCAGTGAGTACTACGCC 59.899 60.000 13.72 13.72 43.08 5.68
2435 3496 1.505353 GCAGTGAGTACTACGCCGT 59.495 57.895 0.00 0.00 34.74 5.68
2442 3503 3.865745 GTGAGTACTACGCCGTAGAGTTA 59.134 47.826 29.37 9.89 38.29 2.24
2448 3509 0.109412 ACGCCGTAGAGTTAGTGCAC 60.109 55.000 9.40 9.40 0.00 4.57
2449 3510 0.170561 CGCCGTAGAGTTAGTGCACT 59.829 55.000 25.12 25.12 0.00 4.40
2450 3511 1.794437 CGCCGTAGAGTTAGTGCACTC 60.794 57.143 25.56 10.38 43.26 3.51
2454 3515 2.355132 CGTAGAGTTAGTGCACTCCGAT 59.645 50.000 25.56 8.13 43.89 4.18
2487 3552 5.179555 GGTAATGAAGCGAATGGGTCTTATC 59.820 44.000 0.00 0.00 0.00 1.75
2488 3553 4.696479 ATGAAGCGAATGGGTCTTATCT 57.304 40.909 0.00 0.00 0.00 1.98
2489 3554 3.797039 TGAAGCGAATGGGTCTTATCTG 58.203 45.455 0.00 0.00 0.00 2.90
2490 3555 3.450817 TGAAGCGAATGGGTCTTATCTGA 59.549 43.478 0.00 0.00 0.00 3.27
2491 3556 4.081142 TGAAGCGAATGGGTCTTATCTGAA 60.081 41.667 0.00 0.00 0.00 3.02
2492 3557 4.696479 AGCGAATGGGTCTTATCTGAAT 57.304 40.909 0.00 0.00 0.00 2.57
2493 3558 4.384056 AGCGAATGGGTCTTATCTGAATG 58.616 43.478 0.00 0.00 0.00 2.67
2494 3559 3.499918 GCGAATGGGTCTTATCTGAATGG 59.500 47.826 0.00 0.00 0.00 3.16
2495 3560 4.743651 GCGAATGGGTCTTATCTGAATGGA 60.744 45.833 0.00 0.00 0.00 3.41
2496 3561 5.368145 CGAATGGGTCTTATCTGAATGGAA 58.632 41.667 0.00 0.00 0.00 3.53
2497 3562 5.822519 CGAATGGGTCTTATCTGAATGGAAA 59.177 40.000 0.00 0.00 0.00 3.13
2498 3563 6.488006 CGAATGGGTCTTATCTGAATGGAAAT 59.512 38.462 0.00 0.00 0.00 2.17
2499 3564 7.661437 CGAATGGGTCTTATCTGAATGGAAATA 59.339 37.037 0.00 0.00 0.00 1.40
2500 3565 9.354673 GAATGGGTCTTATCTGAATGGAAATAA 57.645 33.333 0.00 0.00 0.00 1.40
2501 3566 9.713684 AATGGGTCTTATCTGAATGGAAATAAA 57.286 29.630 0.00 0.00 0.00 1.40
2502 3567 8.752005 TGGGTCTTATCTGAATGGAAATAAAG 57.248 34.615 0.00 0.00 0.00 1.85
2503 3568 8.336235 TGGGTCTTATCTGAATGGAAATAAAGT 58.664 33.333 0.00 0.00 0.00 2.66
2504 3569 8.841300 GGGTCTTATCTGAATGGAAATAAAGTC 58.159 37.037 0.00 0.00 0.00 3.01
2505 3570 9.620259 GGTCTTATCTGAATGGAAATAAAGTCT 57.380 33.333 0.00 0.00 0.00 3.24
2525 3590 8.976986 AAGTCTTTTATGATTTTCTGTGATGC 57.023 30.769 0.00 0.00 0.00 3.91
2526 3591 8.345724 AGTCTTTTATGATTTTCTGTGATGCT 57.654 30.769 0.00 0.00 0.00 3.79
2527 3592 9.453572 AGTCTTTTATGATTTTCTGTGATGCTA 57.546 29.630 0.00 0.00 0.00 3.49
2528 3593 9.713740 GTCTTTTATGATTTTCTGTGATGCTAG 57.286 33.333 0.00 0.00 0.00 3.42
2529 3594 8.896744 TCTTTTATGATTTTCTGTGATGCTAGG 58.103 33.333 0.00 0.00 0.00 3.02
2530 3595 7.572523 TTTATGATTTTCTGTGATGCTAGGG 57.427 36.000 0.00 0.00 0.00 3.53
2531 3596 4.842531 TGATTTTCTGTGATGCTAGGGA 57.157 40.909 0.00 0.00 0.00 4.20
2532 3597 5.178096 TGATTTTCTGTGATGCTAGGGAA 57.822 39.130 0.00 0.00 0.00 3.97
2533 3598 5.569355 TGATTTTCTGTGATGCTAGGGAAA 58.431 37.500 0.00 0.00 0.00 3.13
2534 3599 5.415701 TGATTTTCTGTGATGCTAGGGAAAC 59.584 40.000 0.00 0.00 0.00 2.78
2535 3600 4.640771 TTTCTGTGATGCTAGGGAAACT 57.359 40.909 0.00 0.00 0.00 2.66
2536 3601 4.640771 TTCTGTGATGCTAGGGAAACTT 57.359 40.909 0.00 0.00 0.00 2.66
2537 3602 4.207891 TCTGTGATGCTAGGGAAACTTC 57.792 45.455 0.00 0.00 0.00 3.01
2538 3603 3.840666 TCTGTGATGCTAGGGAAACTTCT 59.159 43.478 0.00 0.00 0.00 2.85
2539 3604 5.023452 TCTGTGATGCTAGGGAAACTTCTA 58.977 41.667 0.00 0.00 0.00 2.10
2540 3605 5.483937 TCTGTGATGCTAGGGAAACTTCTAA 59.516 40.000 0.00 0.00 0.00 2.10
2541 3606 5.734720 TGTGATGCTAGGGAAACTTCTAAG 58.265 41.667 0.00 0.00 0.00 2.18
2542 3607 5.248477 TGTGATGCTAGGGAAACTTCTAAGT 59.752 40.000 0.00 0.00 42.04 2.24
2543 3608 5.813157 GTGATGCTAGGGAAACTTCTAAGTC 59.187 44.000 0.00 0.00 38.57 3.01
2544 3609 5.483937 TGATGCTAGGGAAACTTCTAAGTCA 59.516 40.000 0.00 0.00 38.57 3.41
2545 3610 5.818678 TGCTAGGGAAACTTCTAAGTCAA 57.181 39.130 0.00 0.00 38.57 3.18
2546 3611 6.374417 TGCTAGGGAAACTTCTAAGTCAAT 57.626 37.500 0.00 0.00 38.57 2.57
2547 3612 6.173339 TGCTAGGGAAACTTCTAAGTCAATG 58.827 40.000 0.00 0.00 38.57 2.82
2548 3613 6.174049 GCTAGGGAAACTTCTAAGTCAATGT 58.826 40.000 0.00 0.00 38.57 2.71
2549 3614 6.655425 GCTAGGGAAACTTCTAAGTCAATGTT 59.345 38.462 0.00 0.00 38.57 2.71
2550 3615 6.884280 AGGGAAACTTCTAAGTCAATGTTG 57.116 37.500 0.00 0.00 38.57 3.33
2551 3616 5.770162 AGGGAAACTTCTAAGTCAATGTTGG 59.230 40.000 0.00 0.00 38.57 3.77
2552 3617 5.768164 GGGAAACTTCTAAGTCAATGTTGGA 59.232 40.000 0.00 0.00 38.57 3.53
2553 3618 6.434340 GGGAAACTTCTAAGTCAATGTTGGAT 59.566 38.462 0.00 0.00 38.57 3.41
2554 3619 7.308435 GGAAACTTCTAAGTCAATGTTGGATG 58.692 38.462 0.00 0.00 38.57 3.51
2555 3620 7.174946 GGAAACTTCTAAGTCAATGTTGGATGA 59.825 37.037 0.00 0.00 38.57 2.92
2556 3621 8.641498 AAACTTCTAAGTCAATGTTGGATGAT 57.359 30.769 0.00 0.00 38.57 2.45
2557 3622 8.641498 AACTTCTAAGTCAATGTTGGATGATT 57.359 30.769 0.00 0.00 38.57 2.57
2558 3623 8.641498 ACTTCTAAGTCAATGTTGGATGATTT 57.359 30.769 0.00 0.00 32.86 2.17
2559 3624 9.739276 ACTTCTAAGTCAATGTTGGATGATTTA 57.261 29.630 0.00 0.00 32.86 1.40
2561 3626 9.739276 TTCTAAGTCAATGTTGGATGATTTAGT 57.261 29.630 13.92 0.00 42.15 2.24
2565 3630 8.954950 AGTCAATGTTGGATGATTTAGTAGAG 57.045 34.615 0.00 0.00 0.00 2.43
2566 3631 7.989741 AGTCAATGTTGGATGATTTAGTAGAGG 59.010 37.037 0.00 0.00 0.00 3.69
2567 3632 7.987458 GTCAATGTTGGATGATTTAGTAGAGGA 59.013 37.037 0.00 0.00 0.00 3.71
2568 3633 8.717717 TCAATGTTGGATGATTTAGTAGAGGAT 58.282 33.333 0.00 0.00 0.00 3.24
2569 3634 9.347240 CAATGTTGGATGATTTAGTAGAGGATT 57.653 33.333 0.00 0.00 0.00 3.01
2572 3637 8.651389 TGTTGGATGATTTAGTAGAGGATTAGG 58.349 37.037 0.00 0.00 0.00 2.69
2573 3638 7.798710 TGGATGATTTAGTAGAGGATTAGGG 57.201 40.000 0.00 0.00 0.00 3.53
2574 3639 6.730977 TGGATGATTTAGTAGAGGATTAGGGG 59.269 42.308 0.00 0.00 0.00 4.79
2575 3640 6.731448 GGATGATTTAGTAGAGGATTAGGGGT 59.269 42.308 0.00 0.00 0.00 4.95
2576 3641 7.899709 GGATGATTTAGTAGAGGATTAGGGGTA 59.100 40.741 0.00 0.00 0.00 3.69
2577 3642 9.495382 GATGATTTAGTAGAGGATTAGGGGTAT 57.505 37.037 0.00 0.00 0.00 2.73
2578 3643 8.666129 TGATTTAGTAGAGGATTAGGGGTATG 57.334 38.462 0.00 0.00 0.00 2.39
2579 3644 8.461854 TGATTTAGTAGAGGATTAGGGGTATGA 58.538 37.037 0.00 0.00 0.00 2.15
2580 3645 8.903059 ATTTAGTAGAGGATTAGGGGTATGAG 57.097 38.462 0.00 0.00 0.00 2.90
2581 3646 7.658887 TTAGTAGAGGATTAGGGGTATGAGA 57.341 40.000 0.00 0.00 0.00 3.27
2582 3647 6.547396 AGTAGAGGATTAGGGGTATGAGAA 57.453 41.667 0.00 0.00 0.00 2.87
2583 3648 6.557568 AGTAGAGGATTAGGGGTATGAGAAG 58.442 44.000 0.00 0.00 0.00 2.85
2584 3649 4.757692 AGAGGATTAGGGGTATGAGAAGG 58.242 47.826 0.00 0.00 0.00 3.46
2585 3650 3.252351 AGGATTAGGGGTATGAGAAGGC 58.748 50.000 0.00 0.00 0.00 4.35
2586 3651 2.979678 GGATTAGGGGTATGAGAAGGCA 59.020 50.000 0.00 0.00 0.00 4.75
2587 3652 3.008485 GGATTAGGGGTATGAGAAGGCAG 59.992 52.174 0.00 0.00 0.00 4.85
2588 3653 2.103153 TAGGGGTATGAGAAGGCAGG 57.897 55.000 0.00 0.00 0.00 4.85
2589 3654 0.343372 AGGGGTATGAGAAGGCAGGA 59.657 55.000 0.00 0.00 0.00 3.86
2590 3655 1.213296 GGGGTATGAGAAGGCAGGAA 58.787 55.000 0.00 0.00 0.00 3.36
2591 3656 1.141858 GGGGTATGAGAAGGCAGGAAG 59.858 57.143 0.00 0.00 0.00 3.46
2592 3657 2.119495 GGGTATGAGAAGGCAGGAAGA 58.881 52.381 0.00 0.00 0.00 2.87
2593 3658 2.505819 GGGTATGAGAAGGCAGGAAGAA 59.494 50.000 0.00 0.00 0.00 2.52
2594 3659 3.137360 GGGTATGAGAAGGCAGGAAGAAT 59.863 47.826 0.00 0.00 0.00 2.40
2595 3660 4.348168 GGGTATGAGAAGGCAGGAAGAATA 59.652 45.833 0.00 0.00 0.00 1.75
2596 3661 5.163195 GGGTATGAGAAGGCAGGAAGAATAA 60.163 44.000 0.00 0.00 0.00 1.40
2597 3662 6.357367 GGTATGAGAAGGCAGGAAGAATAAA 58.643 40.000 0.00 0.00 0.00 1.40
2598 3663 7.001073 GGTATGAGAAGGCAGGAAGAATAAAT 58.999 38.462 0.00 0.00 0.00 1.40
2599 3664 8.157476 GGTATGAGAAGGCAGGAAGAATAAATA 58.843 37.037 0.00 0.00 0.00 1.40
2600 3665 9.732130 GTATGAGAAGGCAGGAAGAATAAATAT 57.268 33.333 0.00 0.00 0.00 1.28
2601 3666 8.860780 ATGAGAAGGCAGGAAGAATAAATATC 57.139 34.615 0.00 0.00 0.00 1.63
2602 3667 7.805163 TGAGAAGGCAGGAAGAATAAATATCA 58.195 34.615 0.00 0.00 0.00 2.15
2603 3668 8.274322 TGAGAAGGCAGGAAGAATAAATATCAA 58.726 33.333 0.00 0.00 0.00 2.57
2604 3669 8.457238 AGAAGGCAGGAAGAATAAATATCAAC 57.543 34.615 0.00 0.00 0.00 3.18
2605 3670 8.277918 AGAAGGCAGGAAGAATAAATATCAACT 58.722 33.333 0.00 0.00 0.00 3.16
2606 3671 8.829373 AAGGCAGGAAGAATAAATATCAACTT 57.171 30.769 0.00 0.00 0.00 2.66
2607 3672 8.230472 AGGCAGGAAGAATAAATATCAACTTG 57.770 34.615 0.00 0.00 0.00 3.16
2608 3673 7.836183 AGGCAGGAAGAATAAATATCAACTTGT 59.164 33.333 0.00 0.00 0.00 3.16
2609 3674 8.470002 GGCAGGAAGAATAAATATCAACTTGTT 58.530 33.333 0.00 0.00 0.00 2.83
2610 3675 9.294030 GCAGGAAGAATAAATATCAACTTGTTG 57.706 33.333 7.13 7.13 0.00 3.33
2621 3686 9.524106 AAATATCAACTTGTTGATGCATGTATG 57.476 29.630 28.76 0.00 41.38 2.39
2622 3687 5.345702 ATCAACTTGTTGATGCATGTATGC 58.654 37.500 23.16 9.82 42.25 3.14
2645 3710 6.380111 CAAATCATTTTGCGTGGACTTAAG 57.620 37.500 0.00 0.00 36.13 1.85
2646 3711 3.552604 TCATTTTGCGTGGACTTAAGC 57.447 42.857 1.29 0.00 0.00 3.09
2647 3712 3.146066 TCATTTTGCGTGGACTTAAGCT 58.854 40.909 1.29 0.00 0.00 3.74
2648 3713 3.058293 TCATTTTGCGTGGACTTAAGCTG 60.058 43.478 1.29 0.00 0.00 4.24
2649 3714 2.248280 TTTGCGTGGACTTAAGCTGA 57.752 45.000 1.29 0.00 0.00 4.26
2650 3715 1.508632 TTGCGTGGACTTAAGCTGAC 58.491 50.000 1.29 0.00 0.00 3.51
2651 3716 0.679505 TGCGTGGACTTAAGCTGACT 59.320 50.000 1.29 0.00 0.00 3.41
2652 3717 1.890489 TGCGTGGACTTAAGCTGACTA 59.110 47.619 1.29 0.00 0.00 2.59
2653 3718 2.260481 GCGTGGACTTAAGCTGACTAC 58.740 52.381 1.29 0.00 0.00 2.73
2654 3719 2.352421 GCGTGGACTTAAGCTGACTACA 60.352 50.000 1.29 0.00 0.00 2.74
2655 3720 3.243336 CGTGGACTTAAGCTGACTACAC 58.757 50.000 1.29 0.00 0.00 2.90
2656 3721 3.305131 CGTGGACTTAAGCTGACTACACA 60.305 47.826 1.29 0.00 0.00 3.72
2657 3722 4.628074 GTGGACTTAAGCTGACTACACAA 58.372 43.478 1.29 0.00 0.00 3.33
2658 3723 5.054477 GTGGACTTAAGCTGACTACACAAA 58.946 41.667 1.29 0.00 0.00 2.83
2659 3724 5.177696 GTGGACTTAAGCTGACTACACAAAG 59.822 44.000 1.29 0.00 0.00 2.77
2660 3725 5.163343 TGGACTTAAGCTGACTACACAAAGT 60.163 40.000 1.29 0.00 0.00 2.66
2661 3726 6.041182 TGGACTTAAGCTGACTACACAAAGTA 59.959 38.462 1.29 0.00 0.00 2.24
2662 3727 6.927381 GGACTTAAGCTGACTACACAAAGTAA 59.073 38.462 1.29 0.00 30.92 2.24
2663 3728 7.603024 GGACTTAAGCTGACTACACAAAGTAAT 59.397 37.037 1.29 0.00 30.92 1.89
2664 3729 8.311650 ACTTAAGCTGACTACACAAAGTAATG 57.688 34.615 1.29 0.00 30.92 1.90
2665 3730 8.148351 ACTTAAGCTGACTACACAAAGTAATGA 58.852 33.333 1.29 0.00 30.92 2.57
2666 3731 6.787085 AAGCTGACTACACAAAGTAATGAC 57.213 37.500 0.00 0.00 30.92 3.06
2667 3732 5.853936 AGCTGACTACACAAAGTAATGACA 58.146 37.500 0.00 0.00 30.92 3.58
2668 3733 5.928839 AGCTGACTACACAAAGTAATGACAG 59.071 40.000 0.00 0.00 30.92 3.51
2669 3734 5.389935 GCTGACTACACAAAGTAATGACAGC 60.390 44.000 0.00 0.00 37.32 4.40
2670 3735 5.606505 TGACTACACAAAGTAATGACAGCA 58.393 37.500 0.00 0.00 30.92 4.41
2671 3736 6.052360 TGACTACACAAAGTAATGACAGCAA 58.948 36.000 0.00 0.00 30.92 3.91
2672 3737 6.018262 TGACTACACAAAGTAATGACAGCAAC 60.018 38.462 0.00 0.00 30.92 4.17
2673 3738 6.055588 ACTACACAAAGTAATGACAGCAACT 58.944 36.000 0.00 0.00 30.92 3.16
2674 3739 7.214381 ACTACACAAAGTAATGACAGCAACTA 58.786 34.615 0.00 0.00 30.92 2.24
2675 3740 6.300354 ACACAAAGTAATGACAGCAACTAC 57.700 37.500 0.00 0.00 0.00 2.73
2676 3741 5.050363 ACACAAAGTAATGACAGCAACTACG 60.050 40.000 0.00 0.00 0.00 3.51
2677 3742 5.050363 CACAAAGTAATGACAGCAACTACGT 60.050 40.000 0.00 0.00 0.00 3.57
2678 3743 5.176958 ACAAAGTAATGACAGCAACTACGTC 59.823 40.000 0.00 0.00 0.00 4.34
2679 3744 4.514781 AGTAATGACAGCAACTACGTCA 57.485 40.909 0.00 0.00 43.35 4.35
2680 3745 4.486090 AGTAATGACAGCAACTACGTCAG 58.514 43.478 0.00 0.00 42.53 3.51
2681 3746 2.370281 ATGACAGCAACTACGTCAGG 57.630 50.000 0.00 0.00 42.53 3.86
2682 3747 1.324383 TGACAGCAACTACGTCAGGA 58.676 50.000 0.00 0.00 34.83 3.86
2683 3748 1.684450 TGACAGCAACTACGTCAGGAA 59.316 47.619 0.00 0.00 34.83 3.36
2684 3749 2.101750 TGACAGCAACTACGTCAGGAAA 59.898 45.455 0.00 0.00 34.83 3.13
2685 3750 2.475487 GACAGCAACTACGTCAGGAAAC 59.525 50.000 0.00 0.00 0.00 2.78
2686 3751 2.102588 ACAGCAACTACGTCAGGAAACT 59.897 45.455 0.00 0.00 46.44 2.66
2700 3765 4.022413 AGGAAACTGGTTAAAGAGGAGC 57.978 45.455 0.00 0.00 41.13 4.70
2701 3766 3.394606 AGGAAACTGGTTAAAGAGGAGCA 59.605 43.478 0.00 0.00 41.13 4.26
2702 3767 3.502595 GGAAACTGGTTAAAGAGGAGCAC 59.497 47.826 0.00 0.00 0.00 4.40
2703 3768 3.857157 AACTGGTTAAAGAGGAGCACA 57.143 42.857 0.00 0.00 0.00 4.57
2704 3769 4.373156 AACTGGTTAAAGAGGAGCACAT 57.627 40.909 0.00 0.00 0.00 3.21
2705 3770 5.499004 AACTGGTTAAAGAGGAGCACATA 57.501 39.130 0.00 0.00 0.00 2.29
2706 3771 5.700402 ACTGGTTAAAGAGGAGCACATAT 57.300 39.130 0.00 0.00 0.00 1.78
2707 3772 6.808321 ACTGGTTAAAGAGGAGCACATATA 57.192 37.500 0.00 0.00 0.00 0.86
2708 3773 7.380423 ACTGGTTAAAGAGGAGCACATATAT 57.620 36.000 0.00 0.00 0.00 0.86
2709 3774 7.445945 ACTGGTTAAAGAGGAGCACATATATC 58.554 38.462 0.00 0.00 0.00 1.63
2710 3775 7.291182 ACTGGTTAAAGAGGAGCACATATATCT 59.709 37.037 0.00 0.00 0.00 1.98
2711 3776 8.034313 TGGTTAAAGAGGAGCACATATATCTT 57.966 34.615 0.00 0.00 0.00 2.40
2712 3777 9.154632 TGGTTAAAGAGGAGCACATATATCTTA 57.845 33.333 0.00 0.00 0.00 2.10
2717 3782 9.717942 AAAGAGGAGCACATATATCTTATGTTC 57.282 33.333 0.00 0.00 36.13 3.18
2718 3783 8.663209 AGAGGAGCACATATATCTTATGTTCT 57.337 34.615 0.00 0.00 36.13 3.01
2719 3784 9.760926 AGAGGAGCACATATATCTTATGTTCTA 57.239 33.333 0.00 0.00 36.13 2.10
2747 3812 8.690203 TTAATCATTAGACAACATGTATGGGG 57.310 34.615 0.00 0.00 0.00 4.96
2748 3813 5.966853 TCATTAGACAACATGTATGGGGA 57.033 39.130 0.00 0.00 0.00 4.81
2749 3814 5.680619 TCATTAGACAACATGTATGGGGAC 58.319 41.667 0.00 0.00 0.00 4.46
2764 3829 4.357918 TGGGGACAAGAAGAAGAAGAAG 57.642 45.455 0.00 0.00 37.44 2.85
2765 3830 3.973973 TGGGGACAAGAAGAAGAAGAAGA 59.026 43.478 0.00 0.00 37.44 2.87
2766 3831 4.412199 TGGGGACAAGAAGAAGAAGAAGAA 59.588 41.667 0.00 0.00 37.44 2.52
2767 3832 5.000591 GGGGACAAGAAGAAGAAGAAGAAG 58.999 45.833 0.00 0.00 0.00 2.85
2768 3833 5.221742 GGGGACAAGAAGAAGAAGAAGAAGA 60.222 44.000 0.00 0.00 0.00 2.87
2769 3834 6.292150 GGGACAAGAAGAAGAAGAAGAAGAA 58.708 40.000 0.00 0.00 0.00 2.52
2770 3835 6.426633 GGGACAAGAAGAAGAAGAAGAAGAAG 59.573 42.308 0.00 0.00 0.00 2.85
2771 3836 7.213678 GGACAAGAAGAAGAAGAAGAAGAAGA 58.786 38.462 0.00 0.00 0.00 2.87
2772 3837 7.713073 GGACAAGAAGAAGAAGAAGAAGAAGAA 59.287 37.037 0.00 0.00 0.00 2.52
2773 3838 9.271828 GACAAGAAGAAGAAGAAGAAGAAGAAT 57.728 33.333 0.00 0.00 0.00 2.40
2774 3839 9.054922 ACAAGAAGAAGAAGAAGAAGAAGAATG 57.945 33.333 0.00 0.00 0.00 2.67
2775 3840 9.054922 CAAGAAGAAGAAGAAGAAGAAGAATGT 57.945 33.333 0.00 0.00 0.00 2.71
2776 3841 9.625747 AAGAAGAAGAAGAAGAAGAAGAATGTT 57.374 29.630 0.00 0.00 0.00 2.71
2777 3842 9.271828 AGAAGAAGAAGAAGAAGAAGAATGTTC 57.728 33.333 0.00 0.00 0.00 3.18
2778 3843 9.271828 GAAGAAGAAGAAGAAGAAGAATGTTCT 57.728 33.333 0.00 0.00 40.64 3.01
2780 3845 9.927668 AGAAGAAGAAGAAGAAGAATGTTCTAG 57.072 33.333 0.00 0.00 38.15 2.43
2781 3846 9.921637 GAAGAAGAAGAAGAAGAATGTTCTAGA 57.078 33.333 0.00 0.00 38.15 2.43
2783 3848 9.927668 AGAAGAAGAAGAAGAATGTTCTAGAAG 57.072 33.333 5.12 0.00 38.15 2.85
2784 3849 9.921637 GAAGAAGAAGAAGAATGTTCTAGAAGA 57.078 33.333 5.12 4.84 38.15 2.87
2789 3854 9.447157 AGAAGAAGAATGTTCTAGAAGATTTGG 57.553 33.333 24.15 0.00 37.40 3.28
2790 3855 9.225436 GAAGAAGAATGTTCTAGAAGATTTGGT 57.775 33.333 24.15 14.63 34.89 3.67
2791 3856 9.579932 AAGAAGAATGTTCTAGAAGATTTGGTT 57.420 29.630 24.15 18.32 34.89 3.67
2792 3857 9.007901 AGAAGAATGTTCTAGAAGATTTGGTTG 57.992 33.333 24.15 0.00 34.89 3.77
2793 3858 8.924511 AAGAATGTTCTAGAAGATTTGGTTGA 57.075 30.769 24.15 0.00 34.89 3.18
2794 3859 8.329203 AGAATGTTCTAGAAGATTTGGTTGAC 57.671 34.615 24.15 12.52 34.89 3.18
2795 3860 7.939039 AGAATGTTCTAGAAGATTTGGTTGACA 59.061 33.333 24.15 8.32 34.89 3.58
2796 3861 7.678947 ATGTTCTAGAAGATTTGGTTGACAG 57.321 36.000 9.25 0.00 0.00 3.51
2797 3862 6.826668 TGTTCTAGAAGATTTGGTTGACAGA 58.173 36.000 5.12 0.00 0.00 3.41
2798 3863 6.931281 TGTTCTAGAAGATTTGGTTGACAGAG 59.069 38.462 5.12 0.00 0.00 3.35
2799 3864 6.672266 TCTAGAAGATTTGGTTGACAGAGT 57.328 37.500 0.00 0.00 0.00 3.24
2800 3865 7.067496 TCTAGAAGATTTGGTTGACAGAGTT 57.933 36.000 0.00 0.00 0.00 3.01
2801 3866 8.190326 TCTAGAAGATTTGGTTGACAGAGTTA 57.810 34.615 0.00 0.00 0.00 2.24
2802 3867 8.647796 TCTAGAAGATTTGGTTGACAGAGTTAA 58.352 33.333 0.00 0.00 0.00 2.01
2803 3868 9.442047 CTAGAAGATTTGGTTGACAGAGTTAAT 57.558 33.333 0.00 0.00 0.00 1.40
2804 3869 8.329203 AGAAGATTTGGTTGACAGAGTTAATC 57.671 34.615 0.00 0.00 0.00 1.75
2805 3870 7.939039 AGAAGATTTGGTTGACAGAGTTAATCA 59.061 33.333 0.00 0.00 0.00 2.57
2806 3871 8.463930 AAGATTTGGTTGACAGAGTTAATCAA 57.536 30.769 0.00 0.00 31.89 2.57
2807 3872 8.463930 AGATTTGGTTGACAGAGTTAATCAAA 57.536 30.769 13.16 13.16 42.90 2.69
2808 3873 8.912988 AGATTTGGTTGACAGAGTTAATCAAAA 58.087 29.630 14.30 2.73 42.35 2.44
2809 3874 8.871686 ATTTGGTTGACAGAGTTAATCAAAAC 57.128 30.769 14.30 0.00 42.35 2.43
2810 3875 6.385649 TGGTTGACAGAGTTAATCAAAACC 57.614 37.500 0.00 0.00 34.28 3.27
2811 3876 5.888724 TGGTTGACAGAGTTAATCAAAACCA 59.111 36.000 0.00 0.00 33.06 3.67
2812 3877 6.378564 TGGTTGACAGAGTTAATCAAAACCAA 59.621 34.615 0.00 0.00 32.73 3.67
2813 3878 6.695713 GGTTGACAGAGTTAATCAAAACCAAC 59.304 38.462 0.00 0.00 34.28 3.77
2814 3879 6.385649 TGACAGAGTTAATCAAAACCAACC 57.614 37.500 0.00 0.00 0.00 3.77
2815 3880 5.008217 TGACAGAGTTAATCAAAACCAACCG 59.992 40.000 0.00 0.00 0.00 4.44
2816 3881 4.885325 ACAGAGTTAATCAAAACCAACCGT 59.115 37.500 0.00 0.00 0.00 4.83
2817 3882 5.008316 ACAGAGTTAATCAAAACCAACCGTC 59.992 40.000 0.00 0.00 0.00 4.79
2818 3883 4.517832 AGAGTTAATCAAAACCAACCGTCC 59.482 41.667 0.00 0.00 0.00 4.79
2819 3884 3.570975 AGTTAATCAAAACCAACCGTCCC 59.429 43.478 0.00 0.00 0.00 4.46
2820 3885 1.334160 AATCAAAACCAACCGTCCCC 58.666 50.000 0.00 0.00 0.00 4.81
2821 3886 0.541063 ATCAAAACCAACCGTCCCCC 60.541 55.000 0.00 0.00 0.00 5.40
2822 3887 1.455959 CAAAACCAACCGTCCCCCA 60.456 57.895 0.00 0.00 0.00 4.96
2823 3888 1.043673 CAAAACCAACCGTCCCCCAA 61.044 55.000 0.00 0.00 0.00 4.12
2824 3889 1.044231 AAAACCAACCGTCCCCCAAC 61.044 55.000 0.00 0.00 0.00 3.77
2825 3890 1.940242 AAACCAACCGTCCCCCAACT 61.940 55.000 0.00 0.00 0.00 3.16
2826 3891 2.282180 CCAACCGTCCCCCAACTG 60.282 66.667 0.00 0.00 0.00 3.16
2827 3892 2.824880 CCAACCGTCCCCCAACTGA 61.825 63.158 0.00 0.00 0.00 3.41
2828 3893 1.302511 CAACCGTCCCCCAACTGAG 60.303 63.158 0.00 0.00 0.00 3.35
2829 3894 1.460689 AACCGTCCCCCAACTGAGA 60.461 57.895 0.00 0.00 0.00 3.27
2830 3895 1.481056 AACCGTCCCCCAACTGAGAG 61.481 60.000 0.00 0.00 0.00 3.20
2831 3896 2.266055 CGTCCCCCAACTGAGAGC 59.734 66.667 0.00 0.00 0.00 4.09
2832 3897 2.583441 CGTCCCCCAACTGAGAGCA 61.583 63.158 0.00 0.00 0.00 4.26
2833 3898 1.903877 CGTCCCCCAACTGAGAGCAT 61.904 60.000 0.00 0.00 0.00 3.79
2834 3899 0.107459 GTCCCCCAACTGAGAGCATC 60.107 60.000 0.00 0.00 0.00 3.91
2849 3914 4.431661 GAGCATCTTTCCTTTCCAACTG 57.568 45.455 0.00 0.00 0.00 3.16
2850 3915 2.560105 AGCATCTTTCCTTTCCAACTGC 59.440 45.455 0.00 0.00 0.00 4.40
2851 3916 2.560105 GCATCTTTCCTTTCCAACTGCT 59.440 45.455 0.00 0.00 0.00 4.24
2852 3917 3.366781 GCATCTTTCCTTTCCAACTGCTC 60.367 47.826 0.00 0.00 0.00 4.26
2853 3918 3.576078 TCTTTCCTTTCCAACTGCTCA 57.424 42.857 0.00 0.00 0.00 4.26
2854 3919 3.897239 TCTTTCCTTTCCAACTGCTCAA 58.103 40.909 0.00 0.00 0.00 3.02
2855 3920 3.632145 TCTTTCCTTTCCAACTGCTCAAC 59.368 43.478 0.00 0.00 0.00 3.18
2856 3921 1.981256 TCCTTTCCAACTGCTCAACC 58.019 50.000 0.00 0.00 0.00 3.77
2857 3922 0.593128 CCTTTCCAACTGCTCAACCG 59.407 55.000 0.00 0.00 0.00 4.44
2858 3923 1.308998 CTTTCCAACTGCTCAACCGT 58.691 50.000 0.00 0.00 0.00 4.83
2859 3924 1.676006 CTTTCCAACTGCTCAACCGTT 59.324 47.619 0.00 0.00 0.00 4.44
2860 3925 1.757682 TTCCAACTGCTCAACCGTTT 58.242 45.000 0.00 0.00 0.00 3.60
2861 3926 1.305201 TCCAACTGCTCAACCGTTTC 58.695 50.000 0.00 0.00 0.00 2.78
2862 3927 1.134220 TCCAACTGCTCAACCGTTTCT 60.134 47.619 0.00 0.00 0.00 2.52
2863 3928 1.264288 CCAACTGCTCAACCGTTTCTC 59.736 52.381 0.00 0.00 0.00 2.87
2864 3929 2.213499 CAACTGCTCAACCGTTTCTCT 58.787 47.619 0.00 0.00 0.00 3.10
2865 3930 3.390135 CAACTGCTCAACCGTTTCTCTA 58.610 45.455 0.00 0.00 0.00 2.43
2866 3931 3.305398 ACTGCTCAACCGTTTCTCTAG 57.695 47.619 0.00 0.00 0.00 2.43
2867 3932 2.891580 ACTGCTCAACCGTTTCTCTAGA 59.108 45.455 0.00 0.00 0.00 2.43
2868 3933 3.246619 CTGCTCAACCGTTTCTCTAGAC 58.753 50.000 0.00 0.00 0.00 2.59
2869 3934 2.251893 GCTCAACCGTTTCTCTAGACG 58.748 52.381 0.00 0.00 38.90 4.18
2870 3935 2.251893 CTCAACCGTTTCTCTAGACGC 58.748 52.381 0.00 0.00 37.91 5.19
2871 3936 1.884579 TCAACCGTTTCTCTAGACGCT 59.115 47.619 0.00 0.00 37.91 5.07
2872 3937 2.095364 TCAACCGTTTCTCTAGACGCTC 60.095 50.000 0.00 0.00 37.91 5.03
2873 3938 0.810016 ACCGTTTCTCTAGACGCTCC 59.190 55.000 0.00 0.00 37.91 4.70
2874 3939 1.096416 CCGTTTCTCTAGACGCTCCT 58.904 55.000 0.00 0.00 37.91 3.69
2875 3940 1.064357 CCGTTTCTCTAGACGCTCCTC 59.936 57.143 0.00 0.00 37.91 3.71
2876 3941 2.011222 CGTTTCTCTAGACGCTCCTCT 58.989 52.381 0.00 0.00 32.11 3.69
2877 3942 3.196463 CGTTTCTCTAGACGCTCCTCTA 58.804 50.000 0.00 0.00 32.11 2.43
2878 3943 3.001533 CGTTTCTCTAGACGCTCCTCTAC 59.998 52.174 0.00 0.00 32.11 2.59
2879 3944 3.908643 TTCTCTAGACGCTCCTCTACA 57.091 47.619 0.00 0.00 0.00 2.74
2880 3945 4.425180 TTCTCTAGACGCTCCTCTACAT 57.575 45.455 0.00 0.00 0.00 2.29
2881 3946 3.734463 TCTCTAGACGCTCCTCTACATG 58.266 50.000 0.00 0.00 0.00 3.21
2882 3947 2.222886 TCTAGACGCTCCTCTACATGC 58.777 52.381 0.00 0.00 0.00 4.06
2883 3948 2.158740 TCTAGACGCTCCTCTACATGCT 60.159 50.000 0.00 0.00 0.00 3.79
2884 3949 1.479709 AGACGCTCCTCTACATGCTT 58.520 50.000 0.00 0.00 0.00 3.91
2885 3950 1.407258 AGACGCTCCTCTACATGCTTC 59.593 52.381 0.00 0.00 0.00 3.86
2886 3951 0.461961 ACGCTCCTCTACATGCTTCC 59.538 55.000 0.00 0.00 0.00 3.46
2887 3952 0.461548 CGCTCCTCTACATGCTTCCA 59.538 55.000 0.00 0.00 0.00 3.53
2888 3953 1.804372 CGCTCCTCTACATGCTTCCAC 60.804 57.143 0.00 0.00 0.00 4.02
2889 3954 1.484240 GCTCCTCTACATGCTTCCACT 59.516 52.381 0.00 0.00 0.00 4.00
2890 3955 2.482839 GCTCCTCTACATGCTTCCACTC 60.483 54.545 0.00 0.00 0.00 3.51
2891 3956 2.102252 CTCCTCTACATGCTTCCACTCC 59.898 54.545 0.00 0.00 0.00 3.85
2892 3957 1.202463 CCTCTACATGCTTCCACTCCG 60.202 57.143 0.00 0.00 0.00 4.63
2893 3958 0.175760 TCTACATGCTTCCACTCCGC 59.824 55.000 0.00 0.00 0.00 5.54
2894 3959 0.108186 CTACATGCTTCCACTCCGCA 60.108 55.000 0.00 0.00 38.14 5.69
2895 3960 0.323302 TACATGCTTCCACTCCGCAA 59.677 50.000 0.00 0.00 37.20 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 3.583882 ATGTTGACCTTGGGCGGGG 62.584 63.158 0.00 0.00 0.00 5.73
225 226 2.410322 ATCACCTTGTCCGCCTGCAA 62.410 55.000 0.00 0.00 0.00 4.08
243 244 1.750778 GATGAATTGGGGCGTGAACAT 59.249 47.619 0.00 0.00 0.00 2.71
276 277 1.598130 GCAGGTCGAACAGCTTGGT 60.598 57.895 11.02 0.00 0.00 3.67
282 283 0.673644 AAATCCGGCAGGTCGAACAG 60.674 55.000 1.87 0.00 39.05 3.16
285 286 0.251916 ATGAAATCCGGCAGGTCGAA 59.748 50.000 1.81 0.00 39.05 3.71
360 361 1.101331 GAGCTGGCCCTCATTTTGAG 58.899 55.000 0.00 0.00 43.91 3.02
381 382 1.071299 TGATGCTGCAAGTCACCGT 59.929 52.632 6.36 0.00 35.30 4.83
497 498 3.056821 TCCCACACTTCTTGATAGACACG 60.057 47.826 0.00 0.00 0.00 4.49
503 508 4.160329 ACTCACTCCCACACTTCTTGATA 58.840 43.478 0.00 0.00 0.00 2.15
512 517 3.487120 AAAAGGTACTCACTCCCACAC 57.513 47.619 0.00 0.00 38.49 3.82
590 602 9.499585 CGCTTAATTACGTATAGCATATACTGT 57.500 33.333 15.26 7.23 0.00 3.55
591 603 8.469902 GCGCTTAATTACGTATAGCATATACTG 58.530 37.037 0.00 2.82 0.00 2.74
603 616 5.580661 TGTATGAGTGCGCTTAATTACGTA 58.419 37.500 9.73 0.00 0.00 3.57
604 617 4.426416 TGTATGAGTGCGCTTAATTACGT 58.574 39.130 9.73 0.00 0.00 3.57
605 618 5.383984 TTGTATGAGTGCGCTTAATTACG 57.616 39.130 9.73 0.00 0.00 3.18
606 619 8.548721 ACTAATTGTATGAGTGCGCTTAATTAC 58.451 33.333 9.73 6.22 0.00 1.89
607 620 8.657074 ACTAATTGTATGAGTGCGCTTAATTA 57.343 30.769 9.73 7.58 0.00 1.40
608 621 7.553881 ACTAATTGTATGAGTGCGCTTAATT 57.446 32.000 9.73 6.88 0.00 1.40
609 622 8.833231 ATACTAATTGTATGAGTGCGCTTAAT 57.167 30.769 9.73 1.16 40.12 1.40
615 635 5.059832 GCGAGATACTAATTGTATGAGTGCG 59.940 44.000 5.59 0.00 41.55 5.34
629 649 1.091197 TCACACGCGGCGAGATACTA 61.091 55.000 30.94 4.45 0.00 1.82
635 655 3.112075 ATTGTCACACGCGGCGAG 61.112 61.111 30.94 24.15 0.00 5.03
638 658 0.996727 GAAACATTGTCACACGCGGC 60.997 55.000 12.47 0.00 0.00 6.53
648 668 4.050553 CTGCACAAATTCGGAAACATTGT 58.949 39.130 11.68 11.68 34.74 2.71
700 724 5.697633 GCAATGTGGATTTTGTCAAGAACAT 59.302 36.000 0.00 0.00 37.82 2.71
701 725 5.049167 GCAATGTGGATTTTGTCAAGAACA 58.951 37.500 0.00 0.00 35.59 3.18
702 726 5.049167 TGCAATGTGGATTTTGTCAAGAAC 58.951 37.500 0.00 0.00 0.00 3.01
708 732 5.527951 TGTAAGTGCAATGTGGATTTTGTC 58.472 37.500 0.00 0.00 0.00 3.18
713 737 5.528043 TGTTTGTAAGTGCAATGTGGATT 57.472 34.783 0.00 0.00 0.00 3.01
721 745 3.605922 CGATTCGCTGTTTGTAAGTGCAA 60.606 43.478 0.00 0.00 0.00 4.08
722 746 2.096466 CGATTCGCTGTTTGTAAGTGCA 60.096 45.455 0.00 0.00 0.00 4.57
726 750 4.149922 TGAGAACGATTCGCTGTTTGTAAG 59.850 41.667 5.86 0.00 34.02 2.34
759 833 6.260377 TGATGATTTGATGTCTCGAATTTGC 58.740 36.000 0.00 0.00 35.92 3.68
780 856 6.776116 AGTATTCATCAAACATCATGGCTGAT 59.224 34.615 0.00 0.00 43.02 2.90
784 860 5.533903 AGGAGTATTCATCAAACATCATGGC 59.466 40.000 0.00 0.00 0.00 4.40
785 861 8.152898 TCTAGGAGTATTCATCAAACATCATGG 58.847 37.037 0.00 0.00 0.00 3.66
786 862 9.722184 ATCTAGGAGTATTCATCAAACATCATG 57.278 33.333 0.00 0.00 0.00 3.07
789 865 9.868277 CCTATCTAGGAGTATTCATCAAACATC 57.132 37.037 0.00 0.00 46.63 3.06
852 928 2.550606 GCCCGTAGTTCACAACAATGAA 59.449 45.455 0.00 0.00 36.23 2.57
853 929 2.147958 GCCCGTAGTTCACAACAATGA 58.852 47.619 0.00 0.00 0.00 2.57
854 930 1.876799 TGCCCGTAGTTCACAACAATG 59.123 47.619 0.00 0.00 0.00 2.82
855 931 1.877443 GTGCCCGTAGTTCACAACAAT 59.123 47.619 0.00 0.00 0.00 2.71
856 932 1.301423 GTGCCCGTAGTTCACAACAA 58.699 50.000 0.00 0.00 0.00 2.83
857 933 0.178301 TGTGCCCGTAGTTCACAACA 59.822 50.000 0.00 0.00 37.73 3.33
858 934 1.196808 CATGTGCCCGTAGTTCACAAC 59.803 52.381 0.00 0.00 42.97 3.32
859 935 1.070914 TCATGTGCCCGTAGTTCACAA 59.929 47.619 0.00 0.00 42.97 3.33
860 936 0.682292 TCATGTGCCCGTAGTTCACA 59.318 50.000 0.00 0.00 43.72 3.58
861 937 1.359848 CTCATGTGCCCGTAGTTCAC 58.640 55.000 0.00 0.00 0.00 3.18
862 938 0.391130 GCTCATGTGCCCGTAGTTCA 60.391 55.000 8.59 0.00 0.00 3.18
863 939 0.108138 AGCTCATGTGCCCGTAGTTC 60.108 55.000 15.81 0.00 0.00 3.01
864 940 0.108138 GAGCTCATGTGCCCGTAGTT 60.108 55.000 15.81 0.00 0.00 2.24
865 941 1.517832 GAGCTCATGTGCCCGTAGT 59.482 57.895 15.81 0.00 0.00 2.73
866 942 1.589993 CGAGCTCATGTGCCCGTAG 60.590 63.158 15.40 0.41 29.67 3.51
867 943 1.391933 ATCGAGCTCATGTGCCCGTA 61.392 55.000 20.53 10.00 35.69 4.02
868 944 2.725312 ATCGAGCTCATGTGCCCGT 61.725 57.895 20.53 7.93 35.69 5.28
869 945 2.107750 ATCGAGCTCATGTGCCCG 59.892 61.111 16.30 16.30 35.52 6.13
870 946 0.104855 TACATCGAGCTCATGTGCCC 59.895 55.000 27.68 3.54 35.95 5.36
871 947 1.939974 TTACATCGAGCTCATGTGCC 58.060 50.000 27.68 7.08 35.95 5.01
872 948 4.507756 TGTTATTACATCGAGCTCATGTGC 59.492 41.667 27.68 11.79 35.95 4.57
873 949 5.050769 GGTGTTATTACATCGAGCTCATGTG 60.051 44.000 27.68 19.30 36.50 3.21
874 950 5.050490 GGTGTTATTACATCGAGCTCATGT 58.950 41.667 25.03 25.03 36.50 3.21
875 951 4.449068 GGGTGTTATTACATCGAGCTCATG 59.551 45.833 15.40 17.45 36.18 3.07
876 952 4.503296 GGGGTGTTATTACATCGAGCTCAT 60.503 45.833 15.40 3.67 36.18 2.90
877 953 3.181469 GGGGTGTTATTACATCGAGCTCA 60.181 47.826 15.40 1.08 36.18 4.26
878 954 3.391049 GGGGTGTTATTACATCGAGCTC 58.609 50.000 2.73 2.73 36.18 4.09
879 955 2.104281 GGGGGTGTTATTACATCGAGCT 59.896 50.000 0.00 0.00 36.18 4.09
880 956 2.158871 TGGGGGTGTTATTACATCGAGC 60.159 50.000 0.00 0.00 36.18 5.03
916 998 0.036388 GTGCTGGCCTGTTAGTGCTA 60.036 55.000 11.69 0.00 0.00 3.49
924 1006 3.081804 GTTGTTATTAGTGCTGGCCTGT 58.918 45.455 11.69 0.00 0.00 4.00
925 1007 2.095853 CGTTGTTATTAGTGCTGGCCTG 59.904 50.000 3.32 4.26 0.00 4.85
926 1008 2.027561 TCGTTGTTATTAGTGCTGGCCT 60.028 45.455 3.32 0.00 0.00 5.19
927 1009 2.352388 TCGTTGTTATTAGTGCTGGCC 58.648 47.619 0.00 0.00 0.00 5.36
928 1010 4.094294 TCAATCGTTGTTATTAGTGCTGGC 59.906 41.667 0.00 0.00 0.00 4.85
929 1011 5.794687 TCAATCGTTGTTATTAGTGCTGG 57.205 39.130 0.00 0.00 0.00 4.85
930 1012 7.060600 TCTTCAATCGTTGTTATTAGTGCTG 57.939 36.000 0.00 0.00 0.00 4.41
931 1013 7.667043 TTCTTCAATCGTTGTTATTAGTGCT 57.333 32.000 0.00 0.00 0.00 4.40
932 1014 7.006210 CGTTTCTTCAATCGTTGTTATTAGTGC 59.994 37.037 0.00 0.00 0.00 4.40
933 1015 7.006210 GCGTTTCTTCAATCGTTGTTATTAGTG 59.994 37.037 0.00 0.00 0.00 2.74
934 1016 7.013529 GCGTTTCTTCAATCGTTGTTATTAGT 58.986 34.615 0.00 0.00 0.00 2.24
935 1017 6.464834 GGCGTTTCTTCAATCGTTGTTATTAG 59.535 38.462 0.00 0.00 0.00 1.73
936 1018 6.073167 TGGCGTTTCTTCAATCGTTGTTATTA 60.073 34.615 0.00 0.00 0.00 0.98
937 1019 5.151389 GGCGTTTCTTCAATCGTTGTTATT 58.849 37.500 0.00 0.00 0.00 1.40
938 1020 4.214545 TGGCGTTTCTTCAATCGTTGTTAT 59.785 37.500 0.00 0.00 0.00 1.89
946 1028 1.068541 GTGGGTGGCGTTTCTTCAATC 60.069 52.381 0.00 0.00 0.00 2.67
1135 1217 0.967887 AGCAGCAGGAAGTAGAGCGA 60.968 55.000 0.00 0.00 0.00 4.93
1567 1649 4.070552 GCTCTCCCGCCTGAACGT 62.071 66.667 0.00 0.00 0.00 3.99
1604 1686 0.948623 CATTCAGGTGACGCGAACCA 60.949 55.000 28.53 15.18 40.40 3.67
1665 1747 1.944024 CTCCGTGCTGGTAGACTAGAG 59.056 57.143 0.00 0.00 39.52 2.43
1797 1887 6.371825 AGGTGCAGTTAACTCTAAATAACAGC 59.628 38.462 4.77 2.78 41.86 4.40
1806 1896 5.185249 CCTGTAGAAGGTGCAGTTAACTCTA 59.815 44.000 4.77 0.00 41.74 2.43
1818 1908 6.371825 GTGTAATTTTCTCCCTGTAGAAGGTG 59.628 42.308 0.00 0.00 45.78 4.00
1953 2046 2.046023 TGCATTGGACGCAGGAGG 60.046 61.111 0.00 0.00 33.55 4.30
1955 2048 0.608856 AATGTGCATTGGACGCAGGA 60.609 50.000 3.76 0.00 40.78 3.86
2004 2993 6.218019 CACGGATGCATGAATGGATTATTTT 58.782 36.000 2.46 0.00 39.04 1.82
2005 2994 5.279106 CCACGGATGCATGAATGGATTATTT 60.279 40.000 2.46 0.00 39.04 1.40
2006 2995 4.219070 CCACGGATGCATGAATGGATTATT 59.781 41.667 2.46 0.00 39.04 1.40
2007 2996 3.760151 CCACGGATGCATGAATGGATTAT 59.240 43.478 2.46 0.00 39.04 1.28
2008 2997 3.148412 CCACGGATGCATGAATGGATTA 58.852 45.455 2.46 0.00 39.04 1.75
2009 2998 1.958579 CCACGGATGCATGAATGGATT 59.041 47.619 2.46 0.00 39.04 3.01
2010 2999 1.612676 CCACGGATGCATGAATGGAT 58.387 50.000 2.46 0.00 41.76 3.41
2011 3000 1.102809 GCCACGGATGCATGAATGGA 61.103 55.000 19.27 0.00 0.00 3.41
2013 3002 0.030235 CTGCCACGGATGCATGAATG 59.970 55.000 2.46 0.00 38.22 2.67
2014 3003 1.731433 GCTGCCACGGATGCATGAAT 61.731 55.000 2.46 0.00 38.22 2.57
2015 3004 2.409055 GCTGCCACGGATGCATGAA 61.409 57.895 2.46 0.00 38.22 2.57
2016 3005 2.825387 GCTGCCACGGATGCATGA 60.825 61.111 2.46 0.00 38.22 3.07
2017 3006 2.827190 AGCTGCCACGGATGCATG 60.827 61.111 2.46 0.00 38.22 4.06
2018 3007 2.825075 TTCAGCTGCCACGGATGCAT 62.825 55.000 9.47 0.00 38.22 3.96
2019 3008 3.549900 TTCAGCTGCCACGGATGCA 62.550 57.895 9.47 0.00 37.17 3.96
2026 3015 2.758770 TACGGTCGTTCAGCTGCCAC 62.759 60.000 9.47 7.33 0.00 5.01
2039 3028 3.492421 TCGTATCACAAAGGTACGGTC 57.508 47.619 7.91 0.00 40.97 4.79
2052 3041 0.753848 TGTCAGCGGGGATCGTATCA 60.754 55.000 0.00 0.00 41.72 2.15
2060 3049 1.570857 ATTTGGGATGTCAGCGGGGA 61.571 55.000 0.00 0.00 0.00 4.81
2066 3055 4.497006 GCTCGAATGAATTTGGGATGTCAG 60.497 45.833 0.00 0.00 0.00 3.51
2106 3095 1.137825 CGAGGACGACAGAAGAGGC 59.862 63.158 0.00 0.00 42.66 4.70
2108 3097 0.730265 CCTCGAGGACGACAGAAGAG 59.270 60.000 28.21 0.00 43.81 2.85
2129 3118 0.603707 ACTGTCGAGGGACGTCGTAA 60.604 55.000 9.92 3.73 46.49 3.18
2202 3261 2.006991 GTATTGTGGGAGGGGGCCT 61.007 63.158 0.84 0.00 36.03 5.19
2236 3295 8.970691 ACTATCAAATGTAGTGATTTTGTTGC 57.029 30.769 0.00 0.00 37.01 4.17
2276 3335 3.813529 AAGCGTTGTCTAATTGCTCAC 57.186 42.857 0.00 0.00 34.19 3.51
2311 3370 9.959749 ACGAGCTCAAATTAAACTTGAATTTTA 57.040 25.926 15.40 0.00 34.93 1.52
2312 3371 8.871686 ACGAGCTCAAATTAAACTTGAATTTT 57.128 26.923 15.40 0.00 34.93 1.82
2324 3384 4.391830 CACTAGGCAAACGAGCTCAAATTA 59.608 41.667 15.40 0.00 34.17 1.40
2329 3389 0.679505 ACACTAGGCAAACGAGCTCA 59.320 50.000 15.40 0.00 34.17 4.26
2354 3414 5.421056 AGTCGACTGAAACCCTATGATTACA 59.579 40.000 19.30 0.00 0.00 2.41
2355 3415 5.749109 CAGTCGACTGAAACCCTATGATTAC 59.251 44.000 36.73 0.00 46.59 1.89
2356 3416 5.421056 ACAGTCGACTGAAACCCTATGATTA 59.579 40.000 43.55 0.00 46.59 1.75
2360 3420 3.254060 CACAGTCGACTGAAACCCTATG 58.746 50.000 43.55 27.49 46.59 2.23
2361 3421 2.897969 ACACAGTCGACTGAAACCCTAT 59.102 45.455 43.55 21.61 46.59 2.57
2374 3434 6.129457 GCAAATACAAAGCTTTAACACAGTCG 60.129 38.462 12.25 0.00 0.00 4.18
2398 3458 3.873910 TGCCTCCATCTGTTAAACTAGC 58.126 45.455 0.00 0.00 0.00 3.42
2399 3459 4.872691 CACTGCCTCCATCTGTTAAACTAG 59.127 45.833 0.00 0.00 0.00 2.57
2400 3460 4.530553 TCACTGCCTCCATCTGTTAAACTA 59.469 41.667 0.00 0.00 0.00 2.24
2401 3461 3.327757 TCACTGCCTCCATCTGTTAAACT 59.672 43.478 0.00 0.00 0.00 2.66
2402 3462 3.674997 TCACTGCCTCCATCTGTTAAAC 58.325 45.455 0.00 0.00 0.00 2.01
2403 3463 3.327757 ACTCACTGCCTCCATCTGTTAAA 59.672 43.478 0.00 0.00 0.00 1.52
2406 3466 1.356124 ACTCACTGCCTCCATCTGTT 58.644 50.000 0.00 0.00 0.00 3.16
2407 3467 1.827969 GTACTCACTGCCTCCATCTGT 59.172 52.381 0.00 0.00 0.00 3.41
2408 3468 2.106566 AGTACTCACTGCCTCCATCTG 58.893 52.381 0.00 0.00 32.25 2.90
2414 3475 0.100861 GGCGTAGTACTCACTGCCTC 59.899 60.000 16.18 0.00 39.38 4.70
2416 3477 1.226603 CGGCGTAGTACTCACTGCC 60.227 63.158 14.36 14.36 34.16 4.85
2431 3492 1.469423 GGAGTGCACTAACTCTACGGC 60.469 57.143 21.73 2.54 44.98 5.68
2433 3494 1.736126 TCGGAGTGCACTAACTCTACG 59.264 52.381 21.73 9.79 44.98 3.51
2435 3496 5.401531 AAAATCGGAGTGCACTAACTCTA 57.598 39.130 21.73 2.74 44.98 2.43
2470 3535 4.487714 TTCAGATAAGACCCATTCGCTT 57.512 40.909 0.00 0.00 0.00 4.68
2499 3564 9.415544 GCATCACAGAAAATCATAAAAGACTTT 57.584 29.630 0.00 0.00 0.00 2.66
2500 3565 8.800332 AGCATCACAGAAAATCATAAAAGACTT 58.200 29.630 0.00 0.00 0.00 3.01
2501 3566 8.345724 AGCATCACAGAAAATCATAAAAGACT 57.654 30.769 0.00 0.00 0.00 3.24
2502 3567 9.713740 CTAGCATCACAGAAAATCATAAAAGAC 57.286 33.333 0.00 0.00 0.00 3.01
2503 3568 8.896744 CCTAGCATCACAGAAAATCATAAAAGA 58.103 33.333 0.00 0.00 0.00 2.52
2504 3569 8.133627 CCCTAGCATCACAGAAAATCATAAAAG 58.866 37.037 0.00 0.00 0.00 2.27
2505 3570 7.833682 TCCCTAGCATCACAGAAAATCATAAAA 59.166 33.333 0.00 0.00 0.00 1.52
2506 3571 7.345691 TCCCTAGCATCACAGAAAATCATAAA 58.654 34.615 0.00 0.00 0.00 1.40
2507 3572 6.899089 TCCCTAGCATCACAGAAAATCATAA 58.101 36.000 0.00 0.00 0.00 1.90
2508 3573 6.499106 TCCCTAGCATCACAGAAAATCATA 57.501 37.500 0.00 0.00 0.00 2.15
2509 3574 5.378230 TCCCTAGCATCACAGAAAATCAT 57.622 39.130 0.00 0.00 0.00 2.45
2510 3575 4.842531 TCCCTAGCATCACAGAAAATCA 57.157 40.909 0.00 0.00 0.00 2.57
2511 3576 5.649831 AGTTTCCCTAGCATCACAGAAAATC 59.350 40.000 0.00 0.00 0.00 2.17
2512 3577 5.574188 AGTTTCCCTAGCATCACAGAAAAT 58.426 37.500 0.00 0.00 0.00 1.82
2513 3578 4.985538 AGTTTCCCTAGCATCACAGAAAA 58.014 39.130 0.00 0.00 0.00 2.29
2514 3579 4.640771 AGTTTCCCTAGCATCACAGAAA 57.359 40.909 0.00 0.00 0.00 2.52
2515 3580 4.287067 AGAAGTTTCCCTAGCATCACAGAA 59.713 41.667 0.00 0.00 0.00 3.02
2516 3581 3.840666 AGAAGTTTCCCTAGCATCACAGA 59.159 43.478 0.00 0.00 0.00 3.41
2517 3582 4.213564 AGAAGTTTCCCTAGCATCACAG 57.786 45.455 0.00 0.00 0.00 3.66
2518 3583 5.248477 ACTTAGAAGTTTCCCTAGCATCACA 59.752 40.000 0.00 0.00 35.21 3.58
2519 3584 5.735766 ACTTAGAAGTTTCCCTAGCATCAC 58.264 41.667 0.00 0.00 35.21 3.06
2520 3585 5.483937 TGACTTAGAAGTTTCCCTAGCATCA 59.516 40.000 0.00 0.00 39.88 3.07
2521 3586 5.978814 TGACTTAGAAGTTTCCCTAGCATC 58.021 41.667 0.00 0.00 39.88 3.91
2522 3587 6.374417 TTGACTTAGAAGTTTCCCTAGCAT 57.626 37.500 0.00 0.00 39.88 3.79
2523 3588 5.818678 TTGACTTAGAAGTTTCCCTAGCA 57.181 39.130 0.00 0.00 39.88 3.49
2524 3589 6.174049 ACATTGACTTAGAAGTTTCCCTAGC 58.826 40.000 0.00 0.00 39.88 3.42
2525 3590 7.119846 CCAACATTGACTTAGAAGTTTCCCTAG 59.880 40.741 0.00 0.00 39.88 3.02
2526 3591 6.940298 CCAACATTGACTTAGAAGTTTCCCTA 59.060 38.462 0.00 0.00 39.88 3.53
2527 3592 5.770162 CCAACATTGACTTAGAAGTTTCCCT 59.230 40.000 0.00 0.00 39.88 4.20
2528 3593 5.768164 TCCAACATTGACTTAGAAGTTTCCC 59.232 40.000 0.00 0.00 39.88 3.97
2529 3594 6.877611 TCCAACATTGACTTAGAAGTTTCC 57.122 37.500 0.00 0.00 39.88 3.13
2530 3595 8.099364 TCATCCAACATTGACTTAGAAGTTTC 57.901 34.615 0.00 0.00 39.88 2.78
2531 3596 8.641498 ATCATCCAACATTGACTTAGAAGTTT 57.359 30.769 0.00 0.00 39.88 2.66
2532 3597 8.641498 AATCATCCAACATTGACTTAGAAGTT 57.359 30.769 0.00 0.00 39.88 2.66
2533 3598 8.641498 AAATCATCCAACATTGACTTAGAAGT 57.359 30.769 0.00 0.00 43.16 3.01
2535 3600 9.739276 ACTAAATCATCCAACATTGACTTAGAA 57.261 29.630 7.80 0.00 34.99 2.10
2539 3604 9.388506 CTCTACTAAATCATCCAACATTGACTT 57.611 33.333 0.00 0.00 0.00 3.01
2540 3605 7.989741 CCTCTACTAAATCATCCAACATTGACT 59.010 37.037 0.00 0.00 0.00 3.41
2541 3606 7.987458 TCCTCTACTAAATCATCCAACATTGAC 59.013 37.037 0.00 0.00 0.00 3.18
2542 3607 8.089625 TCCTCTACTAAATCATCCAACATTGA 57.910 34.615 0.00 0.00 0.00 2.57
2543 3608 8.915057 ATCCTCTACTAAATCATCCAACATTG 57.085 34.615 0.00 0.00 0.00 2.82
2546 3611 8.651389 CCTAATCCTCTACTAAATCATCCAACA 58.349 37.037 0.00 0.00 0.00 3.33
2547 3612 8.097662 CCCTAATCCTCTACTAAATCATCCAAC 58.902 40.741 0.00 0.00 0.00 3.77
2548 3613 7.237679 CCCCTAATCCTCTACTAAATCATCCAA 59.762 40.741 0.00 0.00 0.00 3.53
2549 3614 6.730977 CCCCTAATCCTCTACTAAATCATCCA 59.269 42.308 0.00 0.00 0.00 3.41
2550 3615 6.731448 ACCCCTAATCCTCTACTAAATCATCC 59.269 42.308 0.00 0.00 0.00 3.51
2551 3616 7.800300 ACCCCTAATCCTCTACTAAATCATC 57.200 40.000 0.00 0.00 0.00 2.92
2552 3617 9.273137 CATACCCCTAATCCTCTACTAAATCAT 57.727 37.037 0.00 0.00 0.00 2.45
2553 3618 8.461854 TCATACCCCTAATCCTCTACTAAATCA 58.538 37.037 0.00 0.00 0.00 2.57
2554 3619 8.896722 TCATACCCCTAATCCTCTACTAAATC 57.103 38.462 0.00 0.00 0.00 2.17
2555 3620 8.689054 TCTCATACCCCTAATCCTCTACTAAAT 58.311 37.037 0.00 0.00 0.00 1.40
2556 3621 8.065385 TCTCATACCCCTAATCCTCTACTAAA 57.935 38.462 0.00 0.00 0.00 1.85
2557 3622 7.658887 TCTCATACCCCTAATCCTCTACTAA 57.341 40.000 0.00 0.00 0.00 2.24
2558 3623 7.257455 CCTTCTCATACCCCTAATCCTCTACTA 60.257 44.444 0.00 0.00 0.00 1.82
2559 3624 6.469533 CCTTCTCATACCCCTAATCCTCTACT 60.470 46.154 0.00 0.00 0.00 2.57
2560 3625 5.717654 CCTTCTCATACCCCTAATCCTCTAC 59.282 48.000 0.00 0.00 0.00 2.59
2561 3626 5.755365 GCCTTCTCATACCCCTAATCCTCTA 60.755 48.000 0.00 0.00 0.00 2.43
2562 3627 4.757692 CCTTCTCATACCCCTAATCCTCT 58.242 47.826 0.00 0.00 0.00 3.69
2563 3628 3.262151 GCCTTCTCATACCCCTAATCCTC 59.738 52.174 0.00 0.00 0.00 3.71
2564 3629 3.252351 GCCTTCTCATACCCCTAATCCT 58.748 50.000 0.00 0.00 0.00 3.24
2565 3630 2.979678 TGCCTTCTCATACCCCTAATCC 59.020 50.000 0.00 0.00 0.00 3.01
2566 3631 3.008485 CCTGCCTTCTCATACCCCTAATC 59.992 52.174 0.00 0.00 0.00 1.75
2567 3632 2.982488 CCTGCCTTCTCATACCCCTAAT 59.018 50.000 0.00 0.00 0.00 1.73
2568 3633 2.022428 TCCTGCCTTCTCATACCCCTAA 60.022 50.000 0.00 0.00 0.00 2.69
2569 3634 1.578703 TCCTGCCTTCTCATACCCCTA 59.421 52.381 0.00 0.00 0.00 3.53
2570 3635 0.343372 TCCTGCCTTCTCATACCCCT 59.657 55.000 0.00 0.00 0.00 4.79
2571 3636 1.141858 CTTCCTGCCTTCTCATACCCC 59.858 57.143 0.00 0.00 0.00 4.95
2572 3637 2.119495 TCTTCCTGCCTTCTCATACCC 58.881 52.381 0.00 0.00 0.00 3.69
2573 3638 3.914426 TTCTTCCTGCCTTCTCATACC 57.086 47.619 0.00 0.00 0.00 2.73
2574 3639 9.732130 ATATTTATTCTTCCTGCCTTCTCATAC 57.268 33.333 0.00 0.00 0.00 2.39
2575 3640 9.950496 GATATTTATTCTTCCTGCCTTCTCATA 57.050 33.333 0.00 0.00 0.00 2.15
2576 3641 8.443176 TGATATTTATTCTTCCTGCCTTCTCAT 58.557 33.333 0.00 0.00 0.00 2.90
2577 3642 7.805163 TGATATTTATTCTTCCTGCCTTCTCA 58.195 34.615 0.00 0.00 0.00 3.27
2578 3643 8.563732 GTTGATATTTATTCTTCCTGCCTTCTC 58.436 37.037 0.00 0.00 0.00 2.87
2579 3644 8.277918 AGTTGATATTTATTCTTCCTGCCTTCT 58.722 33.333 0.00 0.00 0.00 2.85
2580 3645 8.457238 AGTTGATATTTATTCTTCCTGCCTTC 57.543 34.615 0.00 0.00 0.00 3.46
2581 3646 8.689972 CAAGTTGATATTTATTCTTCCTGCCTT 58.310 33.333 0.00 0.00 0.00 4.35
2582 3647 7.836183 ACAAGTTGATATTTATTCTTCCTGCCT 59.164 33.333 10.54 0.00 0.00 4.75
2583 3648 8.000780 ACAAGTTGATATTTATTCTTCCTGCC 57.999 34.615 10.54 0.00 0.00 4.85
2584 3649 9.294030 CAACAAGTTGATATTTATTCTTCCTGC 57.706 33.333 10.54 0.00 42.93 4.85
2623 3688 4.923281 GCTTAAGTCCACGCAAAATGATTT 59.077 37.500 4.02 0.00 0.00 2.17
2624 3689 4.218417 AGCTTAAGTCCACGCAAAATGATT 59.782 37.500 4.02 0.00 0.00 2.57
2625 3690 3.758554 AGCTTAAGTCCACGCAAAATGAT 59.241 39.130 4.02 0.00 0.00 2.45
2626 3691 3.058293 CAGCTTAAGTCCACGCAAAATGA 60.058 43.478 4.02 0.00 0.00 2.57
2627 3692 3.058293 TCAGCTTAAGTCCACGCAAAATG 60.058 43.478 4.02 0.00 0.00 2.32
2628 3693 3.058224 GTCAGCTTAAGTCCACGCAAAAT 60.058 43.478 4.02 0.00 0.00 1.82
2629 3694 2.289547 GTCAGCTTAAGTCCACGCAAAA 59.710 45.455 4.02 0.00 0.00 2.44
2630 3695 1.871039 GTCAGCTTAAGTCCACGCAAA 59.129 47.619 4.02 0.00 0.00 3.68
2631 3696 1.070134 AGTCAGCTTAAGTCCACGCAA 59.930 47.619 4.02 0.00 0.00 4.85
2632 3697 0.679505 AGTCAGCTTAAGTCCACGCA 59.320 50.000 4.02 0.00 0.00 5.24
2633 3698 2.260481 GTAGTCAGCTTAAGTCCACGC 58.740 52.381 4.02 0.00 0.00 5.34
2634 3699 3.243336 GTGTAGTCAGCTTAAGTCCACG 58.757 50.000 4.02 0.00 0.00 4.94
2635 3700 4.252971 TGTGTAGTCAGCTTAAGTCCAC 57.747 45.455 4.02 0.00 0.00 4.02
2636 3701 4.948341 TTGTGTAGTCAGCTTAAGTCCA 57.052 40.909 4.02 0.00 0.00 4.02
2637 3702 5.298347 ACTTTGTGTAGTCAGCTTAAGTCC 58.702 41.667 4.02 0.00 0.00 3.85
2638 3703 7.941795 TTACTTTGTGTAGTCAGCTTAAGTC 57.058 36.000 4.02 0.00 32.08 3.01
2639 3704 8.148351 TCATTACTTTGTGTAGTCAGCTTAAGT 58.852 33.333 4.02 0.00 32.08 2.24
2640 3705 8.436200 GTCATTACTTTGTGTAGTCAGCTTAAG 58.564 37.037 0.00 0.00 32.08 1.85
2641 3706 7.929245 TGTCATTACTTTGTGTAGTCAGCTTAA 59.071 33.333 0.00 0.00 32.08 1.85
2642 3707 7.438564 TGTCATTACTTTGTGTAGTCAGCTTA 58.561 34.615 0.00 0.00 32.08 3.09
2643 3708 6.288294 TGTCATTACTTTGTGTAGTCAGCTT 58.712 36.000 0.00 0.00 32.08 3.74
2644 3709 5.853936 TGTCATTACTTTGTGTAGTCAGCT 58.146 37.500 0.00 0.00 32.08 4.24
2645 3710 5.389935 GCTGTCATTACTTTGTGTAGTCAGC 60.390 44.000 0.00 0.00 36.36 4.26
2646 3711 5.696270 TGCTGTCATTACTTTGTGTAGTCAG 59.304 40.000 0.00 0.00 32.08 3.51
2647 3712 5.606505 TGCTGTCATTACTTTGTGTAGTCA 58.393 37.500 0.00 0.00 32.08 3.41
2648 3713 6.202954 AGTTGCTGTCATTACTTTGTGTAGTC 59.797 38.462 0.00 0.00 32.08 2.59
2649 3714 6.055588 AGTTGCTGTCATTACTTTGTGTAGT 58.944 36.000 0.00 0.00 32.08 2.73
2650 3715 6.545504 AGTTGCTGTCATTACTTTGTGTAG 57.454 37.500 0.00 0.00 32.08 2.74
2651 3716 6.144886 CGTAGTTGCTGTCATTACTTTGTGTA 59.855 38.462 0.00 0.00 0.00 2.90
2652 3717 5.050363 CGTAGTTGCTGTCATTACTTTGTGT 60.050 40.000 0.00 0.00 0.00 3.72
2653 3718 5.050363 ACGTAGTTGCTGTCATTACTTTGTG 60.050 40.000 0.00 0.00 37.78 3.33
2654 3719 5.054477 ACGTAGTTGCTGTCATTACTTTGT 58.946 37.500 0.00 0.00 37.78 2.83
2655 3720 5.591643 ACGTAGTTGCTGTCATTACTTTG 57.408 39.130 0.00 0.00 37.78 2.77
2672 3737 5.535333 TCTTTAACCAGTTTCCTGACGTAG 58.465 41.667 0.00 0.00 41.50 3.51
2673 3738 5.510179 CCTCTTTAACCAGTTTCCTGACGTA 60.510 44.000 0.00 0.00 41.50 3.57
2674 3739 4.377897 CTCTTTAACCAGTTTCCTGACGT 58.622 43.478 0.00 0.00 41.50 4.34
2675 3740 3.746492 CCTCTTTAACCAGTTTCCTGACG 59.254 47.826 0.00 0.00 41.50 4.35
2676 3741 4.969484 TCCTCTTTAACCAGTTTCCTGAC 58.031 43.478 0.00 0.00 41.50 3.51
2677 3742 4.505039 GCTCCTCTTTAACCAGTTTCCTGA 60.505 45.833 0.00 0.00 41.50 3.86
2678 3743 3.753797 GCTCCTCTTTAACCAGTTTCCTG 59.246 47.826 0.00 0.00 38.50 3.86
2679 3744 3.394606 TGCTCCTCTTTAACCAGTTTCCT 59.605 43.478 0.00 0.00 0.00 3.36
2680 3745 3.502595 GTGCTCCTCTTTAACCAGTTTCC 59.497 47.826 0.00 0.00 0.00 3.13
2681 3746 4.134563 TGTGCTCCTCTTTAACCAGTTTC 58.865 43.478 0.00 0.00 0.00 2.78
2682 3747 4.164843 TGTGCTCCTCTTTAACCAGTTT 57.835 40.909 0.00 0.00 0.00 2.66
2683 3748 3.857157 TGTGCTCCTCTTTAACCAGTT 57.143 42.857 0.00 0.00 0.00 3.16
2684 3749 5.700402 ATATGTGCTCCTCTTTAACCAGT 57.300 39.130 0.00 0.00 0.00 4.00
2685 3750 7.675062 AGATATATGTGCTCCTCTTTAACCAG 58.325 38.462 0.00 0.00 0.00 4.00
2686 3751 7.618019 AGATATATGTGCTCCTCTTTAACCA 57.382 36.000 0.00 0.00 0.00 3.67
2691 3756 9.717942 GAACATAAGATATATGTGCTCCTCTTT 57.282 33.333 2.14 0.00 38.10 2.52
2692 3757 9.099071 AGAACATAAGATATATGTGCTCCTCTT 57.901 33.333 3.70 0.00 39.04 2.85
2693 3758 8.663209 AGAACATAAGATATATGTGCTCCTCT 57.337 34.615 3.70 0.24 39.04 3.69
2721 3786 9.300681 CCCCATACATGTTGTCTAATGATTAAT 57.699 33.333 2.30 0.00 0.00 1.40
2722 3787 8.498575 TCCCCATACATGTTGTCTAATGATTAA 58.501 33.333 2.30 0.00 0.00 1.40
2723 3788 7.936847 GTCCCCATACATGTTGTCTAATGATTA 59.063 37.037 2.30 0.00 0.00 1.75
2724 3789 6.772716 GTCCCCATACATGTTGTCTAATGATT 59.227 38.462 2.30 0.00 0.00 2.57
2725 3790 6.126507 TGTCCCCATACATGTTGTCTAATGAT 60.127 38.462 2.30 0.00 0.00 2.45
2726 3791 5.190726 TGTCCCCATACATGTTGTCTAATGA 59.809 40.000 2.30 0.00 0.00 2.57
2727 3792 5.436175 TGTCCCCATACATGTTGTCTAATG 58.564 41.667 2.30 0.00 0.00 1.90
2728 3793 5.708736 TGTCCCCATACATGTTGTCTAAT 57.291 39.130 2.30 0.00 0.00 1.73
2729 3794 5.249622 TCTTGTCCCCATACATGTTGTCTAA 59.750 40.000 2.30 0.00 0.00 2.10
2730 3795 4.780554 TCTTGTCCCCATACATGTTGTCTA 59.219 41.667 2.30 0.00 0.00 2.59
2731 3796 3.587061 TCTTGTCCCCATACATGTTGTCT 59.413 43.478 2.30 0.00 0.00 3.41
2732 3797 3.950397 TCTTGTCCCCATACATGTTGTC 58.050 45.455 2.30 0.00 0.00 3.18
2733 3798 4.042809 TCTTCTTGTCCCCATACATGTTGT 59.957 41.667 2.30 0.00 0.00 3.32
2734 3799 4.588899 TCTTCTTGTCCCCATACATGTTG 58.411 43.478 2.30 2.25 0.00 3.33
2735 3800 4.927267 TCTTCTTGTCCCCATACATGTT 57.073 40.909 2.30 0.00 0.00 2.71
2736 3801 4.536090 TCTTCTTCTTGTCCCCATACATGT 59.464 41.667 2.69 2.69 0.00 3.21
2737 3802 5.102953 TCTTCTTCTTGTCCCCATACATG 57.897 43.478 0.00 0.00 0.00 3.21
2738 3803 5.488919 TCTTCTTCTTCTTGTCCCCATACAT 59.511 40.000 0.00 0.00 0.00 2.29
2739 3804 4.844085 TCTTCTTCTTCTTGTCCCCATACA 59.156 41.667 0.00 0.00 0.00 2.29
2740 3805 5.422214 TCTTCTTCTTCTTGTCCCCATAC 57.578 43.478 0.00 0.00 0.00 2.39
2741 3806 5.785423 TCTTCTTCTTCTTCTTGTCCCCATA 59.215 40.000 0.00 0.00 0.00 2.74
2742 3807 4.599241 TCTTCTTCTTCTTCTTGTCCCCAT 59.401 41.667 0.00 0.00 0.00 4.00
2743 3808 3.973973 TCTTCTTCTTCTTCTTGTCCCCA 59.026 43.478 0.00 0.00 0.00 4.96
2744 3809 4.625607 TCTTCTTCTTCTTCTTGTCCCC 57.374 45.455 0.00 0.00 0.00 4.81
2745 3810 5.859495 TCTTCTTCTTCTTCTTCTTGTCCC 58.141 41.667 0.00 0.00 0.00 4.46
2746 3811 7.213678 TCTTCTTCTTCTTCTTCTTCTTGTCC 58.786 38.462 0.00 0.00 0.00 4.02
2747 3812 8.655651 TTCTTCTTCTTCTTCTTCTTCTTGTC 57.344 34.615 0.00 0.00 0.00 3.18
2748 3813 9.054922 CATTCTTCTTCTTCTTCTTCTTCTTGT 57.945 33.333 0.00 0.00 0.00 3.16
2749 3814 9.054922 ACATTCTTCTTCTTCTTCTTCTTCTTG 57.945 33.333 0.00 0.00 0.00 3.02
2750 3815 9.625747 AACATTCTTCTTCTTCTTCTTCTTCTT 57.374 29.630 0.00 0.00 0.00 2.52
2751 3816 9.271828 GAACATTCTTCTTCTTCTTCTTCTTCT 57.728 33.333 0.00 0.00 0.00 2.85
2752 3817 9.271828 AGAACATTCTTCTTCTTCTTCTTCTTC 57.728 33.333 0.00 0.00 32.55 2.87
2754 3819 9.927668 CTAGAACATTCTTCTTCTTCTTCTTCT 57.072 33.333 0.00 0.00 38.70 2.85
2755 3820 9.921637 TCTAGAACATTCTTCTTCTTCTTCTTC 57.078 33.333 0.00 0.00 38.70 2.87
2757 3822 9.927668 CTTCTAGAACATTCTTCTTCTTCTTCT 57.072 33.333 0.00 0.00 38.70 2.85
2758 3823 9.921637 TCTTCTAGAACATTCTTCTTCTTCTTC 57.078 33.333 0.00 0.00 38.70 2.87
2763 3828 9.447157 CCAAATCTTCTAGAACATTCTTCTTCT 57.553 33.333 6.45 0.00 38.70 2.85
2764 3829 9.225436 ACCAAATCTTCTAGAACATTCTTCTTC 57.775 33.333 6.45 0.00 38.70 2.87
2765 3830 9.579932 AACCAAATCTTCTAGAACATTCTTCTT 57.420 29.630 6.45 0.00 38.70 2.52
2766 3831 9.007901 CAACCAAATCTTCTAGAACATTCTTCT 57.992 33.333 6.45 0.00 38.70 2.85
2767 3832 9.003658 TCAACCAAATCTTCTAGAACATTCTTC 57.996 33.333 6.45 0.00 38.70 2.87
2768 3833 8.787852 GTCAACCAAATCTTCTAGAACATTCTT 58.212 33.333 6.45 0.00 38.70 2.52
2769 3834 7.939039 TGTCAACCAAATCTTCTAGAACATTCT 59.061 33.333 6.45 0.00 41.24 2.40
2770 3835 8.099364 TGTCAACCAAATCTTCTAGAACATTC 57.901 34.615 6.45 0.00 0.00 2.67
2771 3836 7.939039 TCTGTCAACCAAATCTTCTAGAACATT 59.061 33.333 0.00 0.10 0.00 2.71
2772 3837 7.453393 TCTGTCAACCAAATCTTCTAGAACAT 58.547 34.615 0.00 0.00 0.00 2.71
2773 3838 6.826668 TCTGTCAACCAAATCTTCTAGAACA 58.173 36.000 0.00 0.00 0.00 3.18
2774 3839 6.931840 ACTCTGTCAACCAAATCTTCTAGAAC 59.068 38.462 0.00 0.00 0.00 3.01
2775 3840 7.067496 ACTCTGTCAACCAAATCTTCTAGAA 57.933 36.000 4.81 4.81 0.00 2.10
2776 3841 6.672266 ACTCTGTCAACCAAATCTTCTAGA 57.328 37.500 0.00 0.00 0.00 2.43
2777 3842 8.833231 TTAACTCTGTCAACCAAATCTTCTAG 57.167 34.615 0.00 0.00 0.00 2.43
2778 3843 9.436957 GATTAACTCTGTCAACCAAATCTTCTA 57.563 33.333 0.00 0.00 0.00 2.10
2779 3844 7.939039 TGATTAACTCTGTCAACCAAATCTTCT 59.061 33.333 0.00 0.00 0.00 2.85
2780 3845 8.099364 TGATTAACTCTGTCAACCAAATCTTC 57.901 34.615 0.00 0.00 0.00 2.87
2781 3846 8.463930 TTGATTAACTCTGTCAACCAAATCTT 57.536 30.769 0.00 0.00 0.00 2.40
2782 3847 8.463930 TTTGATTAACTCTGTCAACCAAATCT 57.536 30.769 0.00 0.00 32.10 2.40
2783 3848 8.968242 GTTTTGATTAACTCTGTCAACCAAATC 58.032 33.333 0.00 0.00 32.10 2.17
2784 3849 7.926018 GGTTTTGATTAACTCTGTCAACCAAAT 59.074 33.333 0.00 0.00 32.10 2.32
2785 3850 7.093727 TGGTTTTGATTAACTCTGTCAACCAAA 60.094 33.333 0.00 0.00 32.63 3.28
2786 3851 6.378564 TGGTTTTGATTAACTCTGTCAACCAA 59.621 34.615 0.00 0.00 32.63 3.67
2787 3852 5.888724 TGGTTTTGATTAACTCTGTCAACCA 59.111 36.000 0.00 0.00 32.94 3.67
2788 3853 6.385649 TGGTTTTGATTAACTCTGTCAACC 57.614 37.500 0.00 0.00 32.10 3.77
2789 3854 6.695713 GGTTGGTTTTGATTAACTCTGTCAAC 59.304 38.462 0.00 0.00 32.10 3.18
2790 3855 6.459024 CGGTTGGTTTTGATTAACTCTGTCAA 60.459 38.462 0.00 0.00 0.00 3.18
2791 3856 5.008217 CGGTTGGTTTTGATTAACTCTGTCA 59.992 40.000 0.00 0.00 0.00 3.58
2792 3857 5.008316 ACGGTTGGTTTTGATTAACTCTGTC 59.992 40.000 0.00 0.00 0.00 3.51
2793 3858 4.885325 ACGGTTGGTTTTGATTAACTCTGT 59.115 37.500 0.00 0.00 0.00 3.41
2794 3859 5.432885 ACGGTTGGTTTTGATTAACTCTG 57.567 39.130 0.00 0.00 0.00 3.35
2795 3860 4.517832 GGACGGTTGGTTTTGATTAACTCT 59.482 41.667 0.00 0.00 0.00 3.24
2796 3861 4.320714 GGGACGGTTGGTTTTGATTAACTC 60.321 45.833 0.00 0.00 0.00 3.01
2797 3862 3.570975 GGGACGGTTGGTTTTGATTAACT 59.429 43.478 0.00 0.00 0.00 2.24
2798 3863 3.305539 GGGGACGGTTGGTTTTGATTAAC 60.306 47.826 0.00 0.00 0.00 2.01
2799 3864 2.892215 GGGGACGGTTGGTTTTGATTAA 59.108 45.455 0.00 0.00 0.00 1.40
2800 3865 2.516906 GGGGACGGTTGGTTTTGATTA 58.483 47.619 0.00 0.00 0.00 1.75
2801 3866 1.334160 GGGGACGGTTGGTTTTGATT 58.666 50.000 0.00 0.00 0.00 2.57
2802 3867 0.541063 GGGGGACGGTTGGTTTTGAT 60.541 55.000 0.00 0.00 0.00 2.57
2803 3868 1.152715 GGGGGACGGTTGGTTTTGA 60.153 57.895 0.00 0.00 0.00 2.69
2804 3869 1.043673 TTGGGGGACGGTTGGTTTTG 61.044 55.000 0.00 0.00 0.00 2.44
2805 3870 1.044231 GTTGGGGGACGGTTGGTTTT 61.044 55.000 0.00 0.00 0.00 2.43
2806 3871 1.456145 GTTGGGGGACGGTTGGTTT 60.456 57.895 0.00 0.00 0.00 3.27
2807 3872 2.196502 GTTGGGGGACGGTTGGTT 59.803 61.111 0.00 0.00 0.00 3.67
2808 3873 2.775219 AGTTGGGGGACGGTTGGT 60.775 61.111 0.00 0.00 0.00 3.67
2809 3874 2.282180 CAGTTGGGGGACGGTTGG 60.282 66.667 0.00 0.00 0.00 3.77
2810 3875 1.302511 CTCAGTTGGGGGACGGTTG 60.303 63.158 0.00 0.00 0.00 3.77
2811 3876 1.460689 TCTCAGTTGGGGGACGGTT 60.461 57.895 0.00 0.00 0.00 4.44
2812 3877 1.913762 CTCTCAGTTGGGGGACGGT 60.914 63.158 0.00 0.00 0.00 4.83
2813 3878 2.982130 CTCTCAGTTGGGGGACGG 59.018 66.667 0.00 0.00 0.00 4.79
2814 3879 1.903877 ATGCTCTCAGTTGGGGGACG 61.904 60.000 0.00 0.00 0.00 4.79
2815 3880 0.107459 GATGCTCTCAGTTGGGGGAC 60.107 60.000 0.00 0.00 0.00 4.46
2816 3881 0.252881 AGATGCTCTCAGTTGGGGGA 60.253 55.000 0.00 0.00 0.00 4.81
2817 3882 0.622665 AAGATGCTCTCAGTTGGGGG 59.377 55.000 0.00 0.00 0.00 5.40
2818 3883 2.363683 GAAAGATGCTCTCAGTTGGGG 58.636 52.381 0.00 0.00 0.00 4.96
2819 3884 2.026449 AGGAAAGATGCTCTCAGTTGGG 60.026 50.000 0.00 0.00 0.00 4.12
2820 3885 3.347077 AGGAAAGATGCTCTCAGTTGG 57.653 47.619 0.00 0.00 0.00 3.77
2821 3886 4.155644 GGAAAGGAAAGATGCTCTCAGTTG 59.844 45.833 0.00 0.00 0.00 3.16
2822 3887 4.202503 TGGAAAGGAAAGATGCTCTCAGTT 60.203 41.667 0.00 0.00 0.00 3.16
2823 3888 3.328931 TGGAAAGGAAAGATGCTCTCAGT 59.671 43.478 0.00 0.00 0.00 3.41
2824 3889 3.947868 TGGAAAGGAAAGATGCTCTCAG 58.052 45.455 0.00 0.00 0.00 3.35
2825 3890 4.074970 GTTGGAAAGGAAAGATGCTCTCA 58.925 43.478 0.00 0.00 0.00 3.27
2826 3891 4.155644 CAGTTGGAAAGGAAAGATGCTCTC 59.844 45.833 0.00 0.00 0.00 3.20
2827 3892 4.077822 CAGTTGGAAAGGAAAGATGCTCT 58.922 43.478 0.00 0.00 0.00 4.09
2828 3893 3.366781 GCAGTTGGAAAGGAAAGATGCTC 60.367 47.826 0.00 0.00 0.00 4.26
2829 3894 2.560105 GCAGTTGGAAAGGAAAGATGCT 59.440 45.455 0.00 0.00 0.00 3.79
2830 3895 2.560105 AGCAGTTGGAAAGGAAAGATGC 59.440 45.455 0.00 0.00 0.00 3.91
2831 3896 3.822735 TGAGCAGTTGGAAAGGAAAGATG 59.177 43.478 0.00 0.00 0.00 2.90
2832 3897 4.104383 TGAGCAGTTGGAAAGGAAAGAT 57.896 40.909 0.00 0.00 0.00 2.40
2833 3898 3.576078 TGAGCAGTTGGAAAGGAAAGA 57.424 42.857 0.00 0.00 0.00 2.52
2834 3899 3.243535 GGTTGAGCAGTTGGAAAGGAAAG 60.244 47.826 0.00 0.00 0.00 2.62
2835 3900 2.693074 GGTTGAGCAGTTGGAAAGGAAA 59.307 45.455 0.00 0.00 0.00 3.13
2836 3901 2.306847 GGTTGAGCAGTTGGAAAGGAA 58.693 47.619 0.00 0.00 0.00 3.36
2837 3902 1.813862 CGGTTGAGCAGTTGGAAAGGA 60.814 52.381 0.00 0.00 0.00 3.36
2838 3903 0.593128 CGGTTGAGCAGTTGGAAAGG 59.407 55.000 0.00 0.00 0.00 3.11
2839 3904 1.308998 ACGGTTGAGCAGTTGGAAAG 58.691 50.000 0.00 0.00 0.00 2.62
2840 3905 1.757682 AACGGTTGAGCAGTTGGAAA 58.242 45.000 0.00 0.00 34.32 3.13
2841 3906 1.673920 GAAACGGTTGAGCAGTTGGAA 59.326 47.619 0.00 0.00 35.73 3.53
2842 3907 1.134220 AGAAACGGTTGAGCAGTTGGA 60.134 47.619 0.00 0.00 35.73 3.53
2843 3908 1.264288 GAGAAACGGTTGAGCAGTTGG 59.736 52.381 0.00 0.00 35.73 3.77
2844 3909 2.213499 AGAGAAACGGTTGAGCAGTTG 58.787 47.619 0.00 0.00 35.73 3.16
2845 3910 2.622064 AGAGAAACGGTTGAGCAGTT 57.378 45.000 0.00 0.00 37.09 3.16
2846 3911 2.891580 TCTAGAGAAACGGTTGAGCAGT 59.108 45.455 0.00 0.00 0.00 4.40
2847 3912 3.246619 GTCTAGAGAAACGGTTGAGCAG 58.753 50.000 0.00 0.00 0.00 4.24
2848 3913 2.351447 CGTCTAGAGAAACGGTTGAGCA 60.351 50.000 0.00 0.00 35.32 4.26
2849 3914 2.251893 CGTCTAGAGAAACGGTTGAGC 58.748 52.381 0.00 0.00 35.32 4.26
2850 3915 2.095161 AGCGTCTAGAGAAACGGTTGAG 60.095 50.000 0.00 0.00 46.28 3.02
2851 3916 1.884579 AGCGTCTAGAGAAACGGTTGA 59.115 47.619 0.00 0.00 46.28 3.18
2852 3917 2.349297 AGCGTCTAGAGAAACGGTTG 57.651 50.000 0.00 0.00 46.28 3.77
2855 3920 1.064357 GAGGAGCGTCTAGAGAAACGG 59.936 57.143 0.00 0.00 39.24 4.44
2856 3921 2.011222 AGAGGAGCGTCTAGAGAAACG 58.989 52.381 0.00 0.00 41.68 3.60
2857 3922 3.940221 TGTAGAGGAGCGTCTAGAGAAAC 59.060 47.826 0.00 0.00 29.38 2.78
2858 3923 4.217836 TGTAGAGGAGCGTCTAGAGAAA 57.782 45.455 0.00 0.00 29.38 2.52
2859 3924 3.908643 TGTAGAGGAGCGTCTAGAGAA 57.091 47.619 0.00 0.00 29.38 2.87
2860 3925 3.734463 CATGTAGAGGAGCGTCTAGAGA 58.266 50.000 0.00 0.00 29.38 3.10
2861 3926 2.225491 GCATGTAGAGGAGCGTCTAGAG 59.775 54.545 0.00 0.00 29.38 2.43
2862 3927 2.158740 AGCATGTAGAGGAGCGTCTAGA 60.159 50.000 0.00 0.00 29.38 2.43
2863 3928 2.226330 AGCATGTAGAGGAGCGTCTAG 58.774 52.381 0.00 0.00 29.38 2.43
2864 3929 2.350057 AGCATGTAGAGGAGCGTCTA 57.650 50.000 0.00 0.00 0.00 2.59
2865 3930 1.407258 GAAGCATGTAGAGGAGCGTCT 59.593 52.381 0.00 0.00 33.65 4.18
2866 3931 1.537135 GGAAGCATGTAGAGGAGCGTC 60.537 57.143 0.00 0.00 35.28 5.19
2867 3932 0.461961 GGAAGCATGTAGAGGAGCGT 59.538 55.000 0.00 0.00 0.00 5.07
2868 3933 0.461548 TGGAAGCATGTAGAGGAGCG 59.538 55.000 0.00 0.00 0.00 5.03
2869 3934 1.484240 AGTGGAAGCATGTAGAGGAGC 59.516 52.381 0.00 0.00 0.00 4.70
2870 3935 2.102252 GGAGTGGAAGCATGTAGAGGAG 59.898 54.545 0.00 0.00 0.00 3.69
2871 3936 2.111384 GGAGTGGAAGCATGTAGAGGA 58.889 52.381 0.00 0.00 0.00 3.71
2872 3937 1.202463 CGGAGTGGAAGCATGTAGAGG 60.202 57.143 0.00 0.00 0.00 3.69
2873 3938 1.804372 GCGGAGTGGAAGCATGTAGAG 60.804 57.143 0.00 0.00 0.00 2.43
2874 3939 0.175760 GCGGAGTGGAAGCATGTAGA 59.824 55.000 0.00 0.00 0.00 2.59
2875 3940 0.108186 TGCGGAGTGGAAGCATGTAG 60.108 55.000 0.00 0.00 35.81 2.74
2876 3941 0.323302 TTGCGGAGTGGAAGCATGTA 59.677 50.000 0.00 0.00 40.83 2.29
2877 3942 1.073025 TTGCGGAGTGGAAGCATGT 59.927 52.632 0.00 0.00 40.83 3.21
2878 3943 3.985877 TTGCGGAGTGGAAGCATG 58.014 55.556 0.00 0.00 40.83 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.