Multiple sequence alignment - TraesCS2A01G218700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G218700 chr2A 100.000 2720 0 0 1 2720 205909921 205912640 0.000000e+00 5024.0
1 TraesCS2A01G218700 chr2A 98.084 835 11 5 1889 2720 177895881 177896713 0.000000e+00 1448.0
2 TraesCS2A01G218700 chr3A 98.098 841 11 5 1882 2720 362552262 362553099 0.000000e+00 1459.0
3 TraesCS2A01G218700 chr3A 97.847 836 12 6 1889 2720 658802941 658803774 0.000000e+00 1439.0
4 TraesCS2A01G218700 chr3A 97.839 833 14 3 1889 2720 355269110 355268281 0.000000e+00 1435.0
5 TraesCS2A01G218700 chr3A 98.168 273 4 1 524 795 686899732 686900004 2.450000e-130 475.0
6 TraesCS2A01G218700 chr3A 98.162 272 5 0 526 797 713022081 713021810 2.450000e-130 475.0
7 TraesCS2A01G218700 chr3A 78.784 707 114 19 999 1687 107047943 107048631 2.490000e-120 442.0
8 TraesCS2A01G218700 chr3B 95.524 916 31 10 1813 2720 814438451 814437538 0.000000e+00 1456.0
9 TraesCS2A01G218700 chrUn 98.084 835 11 5 1889 2720 13810457 13811289 0.000000e+00 1448.0
10 TraesCS2A01G218700 chrUn 98.084 835 11 5 1889 2720 362508040 362508872 0.000000e+00 1448.0
11 TraesCS2A01G218700 chr6A 95.695 906 30 9 1819 2720 560646153 560645253 0.000000e+00 1448.0
12 TraesCS2A01G218700 chr6A 99.627 268 0 1 532 798 10546725 10546458 3.150000e-134 488.0
13 TraesCS2A01G218700 chr7B 97.719 833 16 3 1889 2720 282364354 282365184 0.000000e+00 1430.0
14 TraesCS2A01G218700 chr7B 88.764 89 9 1 399 487 487216236 487216323 1.030000e-19 108.0
15 TraesCS2A01G218700 chr2B 97.122 834 24 0 888 1721 248136965 248137798 0.000000e+00 1408.0
16 TraesCS2A01G218700 chr2B 98.868 265 3 0 533 797 150597010 150596746 8.810000e-130 473.0
17 TraesCS2A01G218700 chr2B 77.914 326 52 14 1003 1319 728398394 728398080 4.630000e-43 185.0
18 TraesCS2A01G218700 chr2B 84.091 132 15 3 84 210 248136714 248136844 3.680000e-24 122.0
19 TraesCS2A01G218700 chr2B 90.909 77 6 1 1 76 7914237 7914161 4.790000e-18 102.0
20 TraesCS2A01G218700 chr2D 96.875 832 16 4 910 1731 192186555 192185724 0.000000e+00 1384.0
21 TraesCS2A01G218700 chr2D 88.462 78 8 1 5 81 467085717 467085794 2.880000e-15 93.5
22 TraesCS2A01G218700 chr2D 88.312 77 8 1 1 76 493073762 493073686 1.040000e-14 91.6
23 TraesCS2A01G218700 chr2D 97.561 41 0 1 789 828 192186663 192186623 4.860000e-08 69.4
24 TraesCS2A01G218700 chr5B 100.000 263 0 0 531 793 216402368 216402106 1.130000e-133 486.0
25 TraesCS2A01G218700 chr5B 75.224 335 63 14 997 1321 17952352 17952676 1.020000e-29 141.0
26 TraesCS2A01G218700 chr4A 98.876 267 3 0 532 798 677437689 677437423 6.810000e-131 477.0
27 TraesCS2A01G218700 chr4A 73.763 667 138 29 1003 1651 5115255 5114608 7.580000e-56 228.0
28 TraesCS2A01G218700 chr4B 99.240 263 2 0 533 795 416649241 416649503 2.450000e-130 475.0
29 TraesCS2A01G218700 chr7A 98.872 266 2 1 533 798 706650673 706650937 8.810000e-130 473.0
30 TraesCS2A01G218700 chr5A 98.868 265 3 0 533 797 10553771 10553507 8.810000e-130 473.0
31 TraesCS2A01G218700 chr1B 75.079 634 125 27 1003 1623 349547301 349546688 5.770000e-67 265.0
32 TraesCS2A01G218700 chr1A 74.803 635 128 26 1003 1623 337658533 337657917 9.660000e-65 257.0
33 TraesCS2A01G218700 chr1A 81.250 256 36 8 1067 1319 337629745 337629499 2.140000e-46 196.0
34 TraesCS2A01G218700 chr4D 74.313 619 120 29 1003 1605 465357896 465358491 2.730000e-55 226.0
35 TraesCS2A01G218700 chr1D 83.071 254 35 5 1067 1319 262341552 262341798 9.800000e-55 224.0
36 TraesCS2A01G218700 chr1D 90.789 76 6 1 2 76 217642417 217642492 1.720000e-17 100.0
37 TraesCS2A01G218700 chr1D 89.610 77 7 1 1 76 491706666 491706590 2.230000e-16 97.1
38 TraesCS2A01G218700 chr7D 82.381 210 32 4 1114 1319 22624555 22624347 7.740000e-41 178.0
39 TraesCS2A01G218700 chr7D 88.312 77 8 1 1 76 621300845 621300921 1.040000e-14 91.6
40 TraesCS2A01G218700 chr5D 89.024 82 8 1 1 81 456566799 456566880 1.720000e-17 100.0
41 TraesCS2A01G218700 chr3D 90.789 76 6 1 5 79 68915007 68914932 1.720000e-17 100.0
42 TraesCS2A01G218700 chr6D 88.312 77 8 1 1 76 433693501 433693577 1.040000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G218700 chr2A 205909921 205912640 2719 False 5024.0 5024 100.0000 1 2720 1 chr2A.!!$F2 2719
1 TraesCS2A01G218700 chr2A 177895881 177896713 832 False 1448.0 1448 98.0840 1889 2720 1 chr2A.!!$F1 831
2 TraesCS2A01G218700 chr3A 362552262 362553099 837 False 1459.0 1459 98.0980 1882 2720 1 chr3A.!!$F2 838
3 TraesCS2A01G218700 chr3A 658802941 658803774 833 False 1439.0 1439 97.8470 1889 2720 1 chr3A.!!$F3 831
4 TraesCS2A01G218700 chr3A 355268281 355269110 829 True 1435.0 1435 97.8390 1889 2720 1 chr3A.!!$R1 831
5 TraesCS2A01G218700 chr3A 107047943 107048631 688 False 442.0 442 78.7840 999 1687 1 chr3A.!!$F1 688
6 TraesCS2A01G218700 chr3B 814437538 814438451 913 True 1456.0 1456 95.5240 1813 2720 1 chr3B.!!$R1 907
7 TraesCS2A01G218700 chrUn 13810457 13811289 832 False 1448.0 1448 98.0840 1889 2720 1 chrUn.!!$F1 831
8 TraesCS2A01G218700 chrUn 362508040 362508872 832 False 1448.0 1448 98.0840 1889 2720 1 chrUn.!!$F2 831
9 TraesCS2A01G218700 chr6A 560645253 560646153 900 True 1448.0 1448 95.6950 1819 2720 1 chr6A.!!$R2 901
10 TraesCS2A01G218700 chr7B 282364354 282365184 830 False 1430.0 1430 97.7190 1889 2720 1 chr7B.!!$F1 831
11 TraesCS2A01G218700 chr2B 248136714 248137798 1084 False 765.0 1408 90.6065 84 1721 2 chr2B.!!$F1 1637
12 TraesCS2A01G218700 chr2D 192185724 192186663 939 True 726.7 1384 97.2180 789 1731 2 chr2D.!!$R2 942
13 TraesCS2A01G218700 chr4A 5114608 5115255 647 True 228.0 228 73.7630 1003 1651 1 chr4A.!!$R1 648
14 TraesCS2A01G218700 chr1B 349546688 349547301 613 True 265.0 265 75.0790 1003 1623 1 chr1B.!!$R1 620
15 TraesCS2A01G218700 chr1A 337657917 337658533 616 True 257.0 257 74.8030 1003 1623 1 chr1A.!!$R2 620
16 TraesCS2A01G218700 chr4D 465357896 465358491 595 False 226.0 226 74.3130 1003 1605 1 chr4D.!!$F1 602

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
357 363 0.029035 CTCGGTCGTCTTATCCGGTG 59.971 60.0 0.0 0.0 43.75 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2114 2181 1.066303 CTGCGTGGCAAAAAGGTGTAA 59.934 47.619 0.0 0.0 38.41 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.411808 TCGACTCGATTTTCACCGG 57.588 52.632 0.00 0.00 0.00 5.28
19 20 0.734942 TCGACTCGATTTTCACCGGC 60.735 55.000 0.00 0.00 0.00 6.13
21 22 1.153353 GACTCGATTTTCACCGGCAA 58.847 50.000 0.00 0.00 0.00 4.52
22 23 0.872388 ACTCGATTTTCACCGGCAAC 59.128 50.000 0.00 0.00 0.00 4.17
25 26 2.936498 CTCGATTTTCACCGGCAACTAT 59.064 45.455 0.00 0.00 0.00 2.12
26 27 2.675844 TCGATTTTCACCGGCAACTATG 59.324 45.455 0.00 0.00 0.00 2.23
28 29 3.485216 CGATTTTCACCGGCAACTATGTC 60.485 47.826 0.00 0.00 0.00 3.06
29 30 1.816074 TTTCACCGGCAACTATGTCC 58.184 50.000 0.00 0.00 0.00 4.02
30 31 0.035820 TTCACCGGCAACTATGTCCC 60.036 55.000 0.00 0.00 0.00 4.46
31 32 1.451387 CACCGGCAACTATGTCCCC 60.451 63.158 0.00 0.00 0.00 4.81
32 33 2.192175 CCGGCAACTATGTCCCCC 59.808 66.667 0.00 0.00 0.00 5.40
33 34 2.203015 CGGCAACTATGTCCCCCG 60.203 66.667 0.00 0.00 0.00 5.73
34 35 2.192175 GGCAACTATGTCCCCCGG 59.808 66.667 0.00 0.00 0.00 5.73
35 36 2.516225 GCAACTATGTCCCCCGGC 60.516 66.667 0.00 0.00 0.00 6.13
36 37 3.043999 GCAACTATGTCCCCCGGCT 62.044 63.158 0.00 0.00 0.00 5.52
37 38 1.146263 CAACTATGTCCCCCGGCTC 59.854 63.158 0.00 0.00 0.00 4.70
38 39 2.432300 AACTATGTCCCCCGGCTCG 61.432 63.158 0.00 0.00 0.00 5.03
39 40 4.301027 CTATGTCCCCCGGCTCGC 62.301 72.222 0.00 0.00 0.00 5.03
51 52 4.577246 GCTCGCAGCCGGGACTAG 62.577 72.222 2.18 0.00 36.99 2.57
52 53 2.829003 CTCGCAGCCGGGACTAGA 60.829 66.667 2.18 0.00 36.99 2.43
53 54 2.123854 TCGCAGCCGGGACTAGAT 60.124 61.111 2.18 0.00 34.56 1.98
54 55 2.028190 CGCAGCCGGGACTAGATG 59.972 66.667 2.18 0.00 0.00 2.90
55 56 2.490148 CGCAGCCGGGACTAGATGA 61.490 63.158 2.18 0.00 0.00 2.92
56 57 1.068250 GCAGCCGGGACTAGATGAC 59.932 63.158 2.18 0.00 0.00 3.06
57 58 1.360551 CAGCCGGGACTAGATGACG 59.639 63.158 2.18 0.00 0.00 4.35
58 59 1.828660 AGCCGGGACTAGATGACGG 60.829 63.158 2.18 12.95 46.78 4.79
62 63 1.898902 CGGGACTAGATGACGGATCT 58.101 55.000 0.00 4.78 44.24 2.75
63 64 1.807742 CGGGACTAGATGACGGATCTC 59.192 57.143 0.00 0.00 40.88 2.75
64 65 2.810767 CGGGACTAGATGACGGATCTCA 60.811 54.545 0.00 0.00 40.88 3.27
65 66 3.223435 GGGACTAGATGACGGATCTCAA 58.777 50.000 0.00 0.00 40.88 3.02
66 67 3.254657 GGGACTAGATGACGGATCTCAAG 59.745 52.174 0.00 0.10 40.88 3.02
67 68 4.138290 GGACTAGATGACGGATCTCAAGA 58.862 47.826 0.00 0.00 40.88 3.02
68 69 4.764823 GGACTAGATGACGGATCTCAAGAT 59.235 45.833 0.00 0.00 40.88 2.40
69 70 5.242838 GGACTAGATGACGGATCTCAAGATT 59.757 44.000 0.00 0.00 40.88 2.40
70 71 6.325919 ACTAGATGACGGATCTCAAGATTC 57.674 41.667 0.00 0.00 40.88 2.52
78 79 4.130286 GGATCTCAAGATTCGACCAACT 57.870 45.455 0.00 0.00 34.37 3.16
79 80 5.263968 GGATCTCAAGATTCGACCAACTA 57.736 43.478 0.00 0.00 34.37 2.24
80 81 5.285651 GGATCTCAAGATTCGACCAACTAG 58.714 45.833 0.00 0.00 34.37 2.57
81 82 5.067936 GGATCTCAAGATTCGACCAACTAGA 59.932 44.000 0.00 0.00 34.37 2.43
82 83 5.977489 TCTCAAGATTCGACCAACTAGAA 57.023 39.130 0.00 0.00 0.00 2.10
86 87 6.697395 TCAAGATTCGACCAACTAGAAATCA 58.303 36.000 0.00 0.00 0.00 2.57
115 116 2.352651 CGTGGTGAGAATTCGAATGCAT 59.647 45.455 18.45 4.39 0.00 3.96
117 118 2.684374 TGGTGAGAATTCGAATGCATGG 59.316 45.455 18.45 0.00 0.00 3.66
121 122 1.942657 AGAATTCGAATGCATGGACGG 59.057 47.619 18.45 0.37 0.00 4.79
122 123 1.670811 GAATTCGAATGCATGGACGGT 59.329 47.619 12.25 0.00 0.00 4.83
136 142 2.093075 TGGACGGTGGACTTTTACAACA 60.093 45.455 0.00 0.00 0.00 3.33
138 144 2.288729 GACGGTGGACTTTTACAACACC 59.711 50.000 0.00 0.00 46.14 4.16
143 149 1.331447 GGACTTTTACAACACCGCGTT 59.669 47.619 4.92 0.00 38.83 4.84
155 161 2.032030 ACACCGCGTTGAATGAAGAAAG 60.032 45.455 11.76 0.00 0.00 2.62
160 166 4.737765 CCGCGTTGAATGAAGAAAGAAAAA 59.262 37.500 4.92 0.00 0.00 1.94
175 181 3.723554 AAAAAGTTCAAACGCGCCA 57.276 42.105 5.73 0.00 0.00 5.69
180 186 2.203084 TTCAAACGCGCCAGTCCA 60.203 55.556 5.73 0.00 0.00 4.02
181 187 1.599518 TTCAAACGCGCCAGTCCAT 60.600 52.632 5.73 0.00 0.00 3.41
187 193 0.321298 ACGCGCCAGTCCATACTTTT 60.321 50.000 5.73 0.00 31.97 2.27
212 218 4.963878 CGCTTGAGGGGCTGTAAT 57.036 55.556 0.00 0.00 0.00 1.89
214 220 2.325583 CGCTTGAGGGGCTGTAATAA 57.674 50.000 0.00 0.00 0.00 1.40
215 221 2.213499 CGCTTGAGGGGCTGTAATAAG 58.787 52.381 0.00 0.00 0.00 1.73
216 222 2.420129 CGCTTGAGGGGCTGTAATAAGT 60.420 50.000 0.00 0.00 0.00 2.24
217 223 3.206964 GCTTGAGGGGCTGTAATAAGTC 58.793 50.000 0.00 0.00 0.00 3.01
218 224 3.370527 GCTTGAGGGGCTGTAATAAGTCA 60.371 47.826 0.00 0.00 0.00 3.41
219 225 4.446371 CTTGAGGGGCTGTAATAAGTCAG 58.554 47.826 0.00 0.00 35.12 3.51
233 239 9.378551 TGTAATAAGTCAGCTTAATACTTGTGG 57.621 33.333 11.48 0.00 41.08 4.17
234 240 7.865706 AATAAGTCAGCTTAATACTTGTGGG 57.134 36.000 9.62 0.00 40.22 4.61
235 241 5.499004 AAGTCAGCTTAATACTTGTGGGA 57.501 39.130 0.00 0.00 32.38 4.37
236 242 5.499004 AGTCAGCTTAATACTTGTGGGAA 57.501 39.130 0.00 0.00 0.00 3.97
237 243 5.246307 AGTCAGCTTAATACTTGTGGGAAC 58.754 41.667 0.00 0.00 0.00 3.62
238 244 5.013183 AGTCAGCTTAATACTTGTGGGAACT 59.987 40.000 0.00 0.00 0.00 3.01
239 245 5.705905 GTCAGCTTAATACTTGTGGGAACTT 59.294 40.000 0.00 0.00 0.00 2.66
240 246 5.938125 TCAGCTTAATACTTGTGGGAACTTC 59.062 40.000 0.00 0.00 0.00 3.01
241 247 5.940470 CAGCTTAATACTTGTGGGAACTTCT 59.060 40.000 0.00 0.00 0.00 2.85
242 248 6.431234 CAGCTTAATACTTGTGGGAACTTCTT 59.569 38.462 0.00 0.00 0.00 2.52
243 249 7.606456 CAGCTTAATACTTGTGGGAACTTCTTA 59.394 37.037 0.00 0.00 0.00 2.10
244 250 7.606839 AGCTTAATACTTGTGGGAACTTCTTAC 59.393 37.037 0.00 0.00 0.00 2.34
245 251 7.389607 GCTTAATACTTGTGGGAACTTCTTACA 59.610 37.037 0.00 0.00 0.00 2.41
246 252 8.611654 TTAATACTTGTGGGAACTTCTTACAC 57.388 34.615 0.00 0.00 0.00 2.90
247 253 3.816994 ACTTGTGGGAACTTCTTACACC 58.183 45.455 0.00 0.00 0.00 4.16
248 254 2.536761 TGTGGGAACTTCTTACACCG 57.463 50.000 0.00 0.00 0.00 4.94
249 255 1.154197 GTGGGAACTTCTTACACCGC 58.846 55.000 0.00 0.00 0.00 5.68
250 256 1.053424 TGGGAACTTCTTACACCGCT 58.947 50.000 0.00 0.00 0.00 5.52
251 257 1.418637 TGGGAACTTCTTACACCGCTT 59.581 47.619 0.00 0.00 0.00 4.68
252 258 2.074576 GGGAACTTCTTACACCGCTTC 58.925 52.381 0.00 0.00 0.00 3.86
253 259 1.725164 GGAACTTCTTACACCGCTTCG 59.275 52.381 0.00 0.00 0.00 3.79
254 260 1.126296 GAACTTCTTACACCGCTTCGC 59.874 52.381 0.00 0.00 0.00 4.70
255 261 0.317479 ACTTCTTACACCGCTTCGCT 59.683 50.000 0.00 0.00 0.00 4.93
256 262 1.270147 ACTTCTTACACCGCTTCGCTT 60.270 47.619 0.00 0.00 0.00 4.68
257 263 1.390463 CTTCTTACACCGCTTCGCTTC 59.610 52.381 0.00 0.00 0.00 3.86
258 264 0.315886 TCTTACACCGCTTCGCTTCA 59.684 50.000 0.00 0.00 0.00 3.02
259 265 1.144969 CTTACACCGCTTCGCTTCAA 58.855 50.000 0.00 0.00 0.00 2.69
260 266 0.863144 TTACACCGCTTCGCTTCAAC 59.137 50.000 0.00 0.00 0.00 3.18
261 267 0.249531 TACACCGCTTCGCTTCAACA 60.250 50.000 0.00 0.00 0.00 3.33
262 268 1.092921 ACACCGCTTCGCTTCAACAA 61.093 50.000 0.00 0.00 0.00 2.83
263 269 0.657368 CACCGCTTCGCTTCAACAAC 60.657 55.000 0.00 0.00 0.00 3.32
264 270 1.082104 CCGCTTCGCTTCAACAACC 60.082 57.895 0.00 0.00 0.00 3.77
265 271 1.438710 CGCTTCGCTTCAACAACCG 60.439 57.895 0.00 0.00 0.00 4.44
266 272 1.647084 GCTTCGCTTCAACAACCGT 59.353 52.632 0.00 0.00 0.00 4.83
267 273 0.384353 GCTTCGCTTCAACAACCGTC 60.384 55.000 0.00 0.00 0.00 4.79
268 274 0.234884 CTTCGCTTCAACAACCGTCC 59.765 55.000 0.00 0.00 0.00 4.79
269 275 1.492319 TTCGCTTCAACAACCGTCCG 61.492 55.000 0.00 0.00 0.00 4.79
270 276 1.952133 CGCTTCAACAACCGTCCGA 60.952 57.895 0.00 0.00 0.00 4.55
271 277 1.860078 GCTTCAACAACCGTCCGAG 59.140 57.895 0.00 0.00 0.00 4.63
272 278 0.599204 GCTTCAACAACCGTCCGAGA 60.599 55.000 0.00 0.00 0.00 4.04
273 279 1.860676 CTTCAACAACCGTCCGAGAA 58.139 50.000 0.00 0.00 0.00 2.87
274 280 2.206750 CTTCAACAACCGTCCGAGAAA 58.793 47.619 0.00 0.00 0.00 2.52
275 281 1.860676 TCAACAACCGTCCGAGAAAG 58.139 50.000 0.00 0.00 0.00 2.62
276 282 0.865769 CAACAACCGTCCGAGAAAGG 59.134 55.000 0.00 0.00 0.00 3.11
277 283 0.883370 AACAACCGTCCGAGAAAGGC 60.883 55.000 0.00 0.00 0.00 4.35
278 284 2.048503 AACCGTCCGAGAAAGGCG 60.049 61.111 0.00 0.00 0.00 5.52
279 285 2.567497 AACCGTCCGAGAAAGGCGA 61.567 57.895 0.00 0.00 34.41 5.54
280 286 1.885163 AACCGTCCGAGAAAGGCGAT 61.885 55.000 0.00 0.00 34.41 4.58
281 287 1.153628 CCGTCCGAGAAAGGCGATT 60.154 57.895 0.00 0.00 34.41 3.34
282 288 1.421410 CCGTCCGAGAAAGGCGATTG 61.421 60.000 0.00 0.00 34.41 2.67
283 289 1.421410 CGTCCGAGAAAGGCGATTGG 61.421 60.000 0.00 0.00 34.41 3.16
284 290 1.090052 GTCCGAGAAAGGCGATTGGG 61.090 60.000 0.00 0.00 0.00 4.12
285 291 1.078426 CCGAGAAAGGCGATTGGGT 60.078 57.895 0.00 0.00 0.00 4.51
286 292 0.676782 CCGAGAAAGGCGATTGGGTT 60.677 55.000 0.00 0.00 0.00 4.11
287 293 0.447801 CGAGAAAGGCGATTGGGTTG 59.552 55.000 0.00 0.00 0.00 3.77
288 294 0.811281 GAGAAAGGCGATTGGGTTGG 59.189 55.000 0.00 0.00 0.00 3.77
289 295 1.215382 GAAAGGCGATTGGGTTGGC 59.785 57.895 0.00 0.00 37.04 4.52
290 296 2.542211 GAAAGGCGATTGGGTTGGCG 62.542 60.000 0.00 0.00 41.58 5.69
291 297 3.561120 AAGGCGATTGGGTTGGCGA 62.561 57.895 0.00 0.00 41.58 5.54
292 298 3.059386 GGCGATTGGGTTGGCGAA 61.059 61.111 0.00 0.00 0.00 4.70
293 299 2.178273 GCGATTGGGTTGGCGAAC 59.822 61.111 2.51 2.51 0.00 3.95
313 319 2.125350 CTGCTCCCAGCCTTCGTC 60.125 66.667 0.00 0.00 41.51 4.20
314 320 3.672295 CTGCTCCCAGCCTTCGTCC 62.672 68.421 0.00 0.00 41.51 4.79
315 321 3.706373 GCTCCCAGCCTTCGTCCA 61.706 66.667 0.00 0.00 34.48 4.02
316 322 2.266055 CTCCCAGCCTTCGTCCAC 59.734 66.667 0.00 0.00 0.00 4.02
317 323 3.649277 CTCCCAGCCTTCGTCCACG 62.649 68.421 0.00 0.00 41.45 4.94
318 324 4.003788 CCCAGCCTTCGTCCACGT 62.004 66.667 0.00 0.00 40.80 4.49
319 325 2.432628 CCAGCCTTCGTCCACGTC 60.433 66.667 0.00 0.00 40.80 4.34
320 326 2.805353 CAGCCTTCGTCCACGTCG 60.805 66.667 0.00 0.00 40.80 5.12
321 327 4.719369 AGCCTTCGTCCACGTCGC 62.719 66.667 0.00 0.00 40.80 5.19
344 350 3.462678 GTCCCTGCCTCCTCGGTC 61.463 72.222 0.00 0.00 34.25 4.79
347 353 3.827898 CCTGCCTCCTCGGTCGTC 61.828 72.222 0.00 0.00 34.25 4.20
348 354 2.752238 CTGCCTCCTCGGTCGTCT 60.752 66.667 0.00 0.00 34.25 4.18
349 355 2.282958 TGCCTCCTCGGTCGTCTT 60.283 61.111 0.00 0.00 34.25 3.01
350 356 1.001764 TGCCTCCTCGGTCGTCTTA 60.002 57.895 0.00 0.00 34.25 2.10
351 357 0.395311 TGCCTCCTCGGTCGTCTTAT 60.395 55.000 0.00 0.00 34.25 1.73
352 358 0.311477 GCCTCCTCGGTCGTCTTATC 59.689 60.000 0.00 0.00 34.25 1.75
353 359 0.953003 CCTCCTCGGTCGTCTTATCC 59.047 60.000 0.00 0.00 0.00 2.59
354 360 0.587285 CTCCTCGGTCGTCTTATCCG 59.413 60.000 0.00 0.00 44.76 4.18
355 361 0.816825 TCCTCGGTCGTCTTATCCGG 60.817 60.000 0.00 0.00 43.75 5.14
356 362 1.099879 CCTCGGTCGTCTTATCCGGT 61.100 60.000 0.00 0.00 43.75 5.28
357 363 0.029035 CTCGGTCGTCTTATCCGGTG 59.971 60.000 0.00 0.00 43.75 4.94
358 364 0.392863 TCGGTCGTCTTATCCGGTGA 60.393 55.000 0.00 0.00 43.75 4.02
359 365 0.248377 CGGTCGTCTTATCCGGTGAC 60.248 60.000 0.00 5.52 40.49 3.67
360 366 1.101331 GGTCGTCTTATCCGGTGACT 58.899 55.000 0.00 0.00 0.00 3.41
361 367 1.202268 GGTCGTCTTATCCGGTGACTG 60.202 57.143 0.00 3.85 0.00 3.51
362 368 1.100510 TCGTCTTATCCGGTGACTGG 58.899 55.000 3.42 3.42 0.00 4.00
363 369 1.100510 CGTCTTATCCGGTGACTGGA 58.899 55.000 16.70 16.70 37.42 3.86
364 370 1.065701 CGTCTTATCCGGTGACTGGAG 59.934 57.143 19.26 5.58 36.67 3.86
365 371 1.409427 GTCTTATCCGGTGACTGGAGG 59.591 57.143 19.26 11.20 36.67 4.30
366 372 0.753262 CTTATCCGGTGACTGGAGGG 59.247 60.000 19.26 7.41 36.67 4.30
367 373 0.689745 TTATCCGGTGACTGGAGGGG 60.690 60.000 19.26 0.00 36.67 4.79
368 374 2.599139 TATCCGGTGACTGGAGGGGG 62.599 65.000 19.26 0.00 36.67 5.40
370 376 3.706373 CGGTGACTGGAGGGGGTG 61.706 72.222 0.00 0.00 0.00 4.61
371 377 3.330720 GGTGACTGGAGGGGGTGG 61.331 72.222 0.00 0.00 0.00 4.61
372 378 3.330720 GTGACTGGAGGGGGTGGG 61.331 72.222 0.00 0.00 0.00 4.61
373 379 4.675303 TGACTGGAGGGGGTGGGG 62.675 72.222 0.00 0.00 0.00 4.96
374 380 4.348495 GACTGGAGGGGGTGGGGA 62.348 72.222 0.00 0.00 0.00 4.81
375 381 4.677151 ACTGGAGGGGGTGGGGAC 62.677 72.222 0.00 0.00 0.00 4.46
389 395 2.276869 GGGACCTTGGTGATTTGGC 58.723 57.895 0.00 0.00 0.00 4.52
390 396 0.251787 GGGACCTTGGTGATTTGGCT 60.252 55.000 0.00 0.00 0.00 4.75
391 397 0.890683 GGACCTTGGTGATTTGGCTG 59.109 55.000 0.00 0.00 0.00 4.85
392 398 0.890683 GACCTTGGTGATTTGGCTGG 59.109 55.000 0.00 0.00 0.00 4.85
393 399 0.188342 ACCTTGGTGATTTGGCTGGT 59.812 50.000 0.00 0.00 0.00 4.00
394 400 0.604578 CCTTGGTGATTTGGCTGGTG 59.395 55.000 0.00 0.00 0.00 4.17
395 401 1.331214 CTTGGTGATTTGGCTGGTGT 58.669 50.000 0.00 0.00 0.00 4.16
396 402 2.513753 CTTGGTGATTTGGCTGGTGTA 58.486 47.619 0.00 0.00 0.00 2.90
397 403 2.198827 TGGTGATTTGGCTGGTGTAG 57.801 50.000 0.00 0.00 0.00 2.74
398 404 1.423541 TGGTGATTTGGCTGGTGTAGT 59.576 47.619 0.00 0.00 0.00 2.73
399 405 2.640332 TGGTGATTTGGCTGGTGTAGTA 59.360 45.455 0.00 0.00 0.00 1.82
400 406 3.007635 GGTGATTTGGCTGGTGTAGTAC 58.992 50.000 0.00 0.00 0.00 2.73
401 407 3.307480 GGTGATTTGGCTGGTGTAGTACT 60.307 47.826 0.00 0.00 0.00 2.73
402 408 3.933332 GTGATTTGGCTGGTGTAGTACTC 59.067 47.826 0.00 0.00 0.00 2.59
403 409 3.055385 TGATTTGGCTGGTGTAGTACTCC 60.055 47.826 13.46 13.46 32.62 3.85
404 410 2.320681 TTGGCTGGTGTAGTACTCCT 57.679 50.000 19.46 0.00 33.16 3.69
405 411 2.320681 TGGCTGGTGTAGTACTCCTT 57.679 50.000 19.46 0.00 33.16 3.36
406 412 2.176889 TGGCTGGTGTAGTACTCCTTC 58.823 52.381 19.46 11.93 33.16 3.46
407 413 2.225293 TGGCTGGTGTAGTACTCCTTCT 60.225 50.000 19.46 0.00 33.16 2.85
408 414 2.166664 GGCTGGTGTAGTACTCCTTCTG 59.833 54.545 19.46 10.00 33.16 3.02
409 415 2.166664 GCTGGTGTAGTACTCCTTCTGG 59.833 54.545 19.46 8.09 33.16 3.86
410 416 3.432378 CTGGTGTAGTACTCCTTCTGGT 58.568 50.000 19.46 0.00 33.16 4.00
411 417 3.428532 TGGTGTAGTACTCCTTCTGGTC 58.571 50.000 19.46 0.00 33.16 4.02
412 418 2.422832 GGTGTAGTACTCCTTCTGGTCG 59.577 54.545 13.14 0.00 34.23 4.79
413 419 2.422832 GTGTAGTACTCCTTCTGGTCGG 59.577 54.545 0.00 0.00 34.23 4.79
414 420 2.040813 TGTAGTACTCCTTCTGGTCGGT 59.959 50.000 0.00 0.00 34.23 4.69
415 421 2.305858 AGTACTCCTTCTGGTCGGTT 57.694 50.000 0.00 0.00 34.23 4.44
416 422 2.169330 AGTACTCCTTCTGGTCGGTTC 58.831 52.381 0.00 0.00 34.23 3.62
417 423 1.204231 GTACTCCTTCTGGTCGGTTCC 59.796 57.143 0.00 0.00 34.23 3.62
418 424 0.471211 ACTCCTTCTGGTCGGTTCCA 60.471 55.000 0.00 0.00 36.00 3.53
419 425 0.037232 CTCCTTCTGGTCGGTTCCAC 60.037 60.000 0.00 0.00 33.55 4.02
420 426 1.374252 CCTTCTGGTCGGTTCCACG 60.374 63.158 0.00 0.00 33.55 4.94
421 427 1.366366 CTTCTGGTCGGTTCCACGT 59.634 57.895 0.00 0.00 33.55 4.49
422 428 0.944311 CTTCTGGTCGGTTCCACGTG 60.944 60.000 9.08 9.08 33.55 4.49
423 429 2.981977 TTCTGGTCGGTTCCACGTGC 62.982 60.000 10.91 0.00 33.55 5.34
424 430 3.800685 CTGGTCGGTTCCACGTGCA 62.801 63.158 10.91 0.00 33.55 4.57
425 431 2.358247 GGTCGGTTCCACGTGCAT 60.358 61.111 10.91 0.00 34.94 3.96
426 432 2.677003 GGTCGGTTCCACGTGCATG 61.677 63.158 10.91 3.82 34.94 4.06
427 433 3.047280 TCGGTTCCACGTGCATGC 61.047 61.111 11.82 11.82 34.94 4.06
428 434 3.049674 CGGTTCCACGTGCATGCT 61.050 61.111 20.33 0.00 0.00 3.79
429 435 2.616330 CGGTTCCACGTGCATGCTT 61.616 57.895 20.33 0.00 0.00 3.91
430 436 1.659794 GGTTCCACGTGCATGCTTT 59.340 52.632 20.33 0.00 0.00 3.51
431 437 0.664166 GGTTCCACGTGCATGCTTTG 60.664 55.000 20.33 12.48 0.00 2.77
432 438 0.030638 GTTCCACGTGCATGCTTTGT 59.969 50.000 20.33 11.54 0.00 2.83
433 439 1.265635 GTTCCACGTGCATGCTTTGTA 59.734 47.619 20.33 0.00 0.00 2.41
434 440 1.819928 TCCACGTGCATGCTTTGTAT 58.180 45.000 20.33 0.00 0.00 2.29
435 441 2.158559 TCCACGTGCATGCTTTGTATT 58.841 42.857 20.33 0.00 0.00 1.89
436 442 2.161410 TCCACGTGCATGCTTTGTATTC 59.839 45.455 20.33 0.00 0.00 1.75
437 443 2.162208 CCACGTGCATGCTTTGTATTCT 59.838 45.455 20.33 0.00 0.00 2.40
438 444 3.366273 CCACGTGCATGCTTTGTATTCTT 60.366 43.478 20.33 0.00 0.00 2.52
439 445 3.848019 CACGTGCATGCTTTGTATTCTTC 59.152 43.478 20.33 0.00 0.00 2.87
440 446 3.753272 ACGTGCATGCTTTGTATTCTTCT 59.247 39.130 20.33 0.00 0.00 2.85
441 447 4.216257 ACGTGCATGCTTTGTATTCTTCTT 59.784 37.500 20.33 0.00 0.00 2.52
442 448 5.411361 ACGTGCATGCTTTGTATTCTTCTTA 59.589 36.000 20.33 0.00 0.00 2.10
443 449 6.094048 ACGTGCATGCTTTGTATTCTTCTTAT 59.906 34.615 20.33 0.00 0.00 1.73
444 450 6.968904 CGTGCATGCTTTGTATTCTTCTTATT 59.031 34.615 20.33 0.00 0.00 1.40
445 451 7.485913 CGTGCATGCTTTGTATTCTTCTTATTT 59.514 33.333 20.33 0.00 0.00 1.40
446 452 8.801913 GTGCATGCTTTGTATTCTTCTTATTTC 58.198 33.333 20.33 0.00 0.00 2.17
447 453 8.742777 TGCATGCTTTGTATTCTTCTTATTTCT 58.257 29.630 20.33 0.00 0.00 2.52
448 454 9.017669 GCATGCTTTGTATTCTTCTTATTTCTG 57.982 33.333 11.37 0.00 0.00 3.02
470 476 8.812147 TCTGATTAATGATACACGTGATTACC 57.188 34.615 25.01 10.09 0.00 2.85
471 477 8.638873 TCTGATTAATGATACACGTGATTACCT 58.361 33.333 25.01 0.00 0.00 3.08
472 478 8.812147 TGATTAATGATACACGTGATTACCTC 57.188 34.615 25.01 13.79 0.00 3.85
473 479 8.417884 TGATTAATGATACACGTGATTACCTCA 58.582 33.333 25.01 15.82 0.00 3.86
474 480 9.256477 GATTAATGATACACGTGATTACCTCAA 57.744 33.333 25.01 7.32 35.07 3.02
475 481 9.607988 ATTAATGATACACGTGATTACCTCAAA 57.392 29.630 25.01 6.27 35.07 2.69
476 482 7.915293 AATGATACACGTGATTACCTCAAAA 57.085 32.000 25.01 0.00 35.07 2.44
477 483 8.506168 AATGATACACGTGATTACCTCAAAAT 57.494 30.769 25.01 0.00 35.07 1.82
478 484 9.607988 AATGATACACGTGATTACCTCAAAATA 57.392 29.630 25.01 0.00 35.07 1.40
479 485 9.607988 ATGATACACGTGATTACCTCAAAATAA 57.392 29.630 25.01 0.00 35.07 1.40
480 486 9.438228 TGATACACGTGATTACCTCAAAATAAA 57.562 29.630 25.01 0.00 35.07 1.40
527 533 1.066716 AGTAAACCGATGCCGCACTAA 60.067 47.619 0.00 0.00 0.00 2.24
528 534 1.326548 GTAAACCGATGCCGCACTAAG 59.673 52.381 0.00 0.00 0.00 2.18
529 535 0.036765 AAACCGATGCCGCACTAAGA 60.037 50.000 0.00 0.00 0.00 2.10
530 536 0.036765 AACCGATGCCGCACTAAGAA 60.037 50.000 0.00 0.00 0.00 2.52
532 538 1.299541 CCGATGCCGCACTAAGAAAT 58.700 50.000 0.00 0.00 0.00 2.17
533 539 2.159014 ACCGATGCCGCACTAAGAAATA 60.159 45.455 0.00 0.00 0.00 1.40
534 540 2.221055 CCGATGCCGCACTAAGAAATAC 59.779 50.000 0.00 0.00 0.00 1.89
535 541 3.123804 CGATGCCGCACTAAGAAATACT 58.876 45.455 0.00 0.00 0.00 2.12
536 542 3.182572 CGATGCCGCACTAAGAAATACTC 59.817 47.826 0.00 0.00 0.00 2.59
537 543 2.901249 TGCCGCACTAAGAAATACTCC 58.099 47.619 0.00 0.00 0.00 3.85
538 544 2.210961 GCCGCACTAAGAAATACTCCC 58.789 52.381 0.00 0.00 0.00 4.30
539 545 2.158943 GCCGCACTAAGAAATACTCCCT 60.159 50.000 0.00 0.00 0.00 4.20
540 546 3.718815 CCGCACTAAGAAATACTCCCTC 58.281 50.000 0.00 0.00 0.00 4.30
541 547 3.492829 CCGCACTAAGAAATACTCCCTCC 60.493 52.174 0.00 0.00 0.00 4.30
542 548 3.718815 GCACTAAGAAATACTCCCTCCG 58.281 50.000 0.00 0.00 0.00 4.63
543 549 3.132467 GCACTAAGAAATACTCCCTCCGT 59.868 47.826 0.00 0.00 0.00 4.69
544 550 4.382793 GCACTAAGAAATACTCCCTCCGTT 60.383 45.833 0.00 0.00 0.00 4.44
545 551 5.349809 CACTAAGAAATACTCCCTCCGTTC 58.650 45.833 0.00 0.00 0.00 3.95
546 552 3.908643 AAGAAATACTCCCTCCGTTCC 57.091 47.619 0.00 0.00 0.00 3.62
547 553 2.829023 AGAAATACTCCCTCCGTTCCA 58.171 47.619 0.00 0.00 0.00 3.53
548 554 3.385115 AGAAATACTCCCTCCGTTCCAT 58.615 45.455 0.00 0.00 0.00 3.41
549 555 4.553678 AGAAATACTCCCTCCGTTCCATA 58.446 43.478 0.00 0.00 0.00 2.74
550 556 4.966805 AGAAATACTCCCTCCGTTCCATAA 59.033 41.667 0.00 0.00 0.00 1.90
551 557 5.607171 AGAAATACTCCCTCCGTTCCATAAT 59.393 40.000 0.00 0.00 0.00 1.28
552 558 4.891992 ATACTCCCTCCGTTCCATAATG 57.108 45.455 0.00 0.00 0.00 1.90
553 559 2.478292 ACTCCCTCCGTTCCATAATGT 58.522 47.619 0.00 0.00 0.00 2.71
554 560 3.649843 ACTCCCTCCGTTCCATAATGTA 58.350 45.455 0.00 0.00 0.00 2.29
555 561 3.641906 ACTCCCTCCGTTCCATAATGTAG 59.358 47.826 0.00 0.00 0.00 2.74
556 562 2.367567 TCCCTCCGTTCCATAATGTAGC 59.632 50.000 0.00 0.00 0.00 3.58
557 563 2.404215 CCTCCGTTCCATAATGTAGCG 58.596 52.381 0.00 0.00 0.00 4.26
558 564 1.792949 CTCCGTTCCATAATGTAGCGC 59.207 52.381 0.00 0.00 0.00 5.92
559 565 1.137282 TCCGTTCCATAATGTAGCGCA 59.863 47.619 11.47 0.00 0.00 6.09
560 566 2.143122 CCGTTCCATAATGTAGCGCAT 58.857 47.619 11.47 0.00 40.03 4.73
561 567 3.006003 TCCGTTCCATAATGTAGCGCATA 59.994 43.478 11.47 0.00 36.67 3.14
562 568 3.932710 CCGTTCCATAATGTAGCGCATAT 59.067 43.478 11.47 0.00 36.67 1.78
563 569 5.105675 TCCGTTCCATAATGTAGCGCATATA 60.106 40.000 11.47 0.00 36.67 0.86
564 570 5.232202 CCGTTCCATAATGTAGCGCATATAG 59.768 44.000 11.47 0.00 36.67 1.31
565 571 6.033966 CGTTCCATAATGTAGCGCATATAGA 58.966 40.000 11.47 0.00 36.67 1.98
566 572 6.697455 CGTTCCATAATGTAGCGCATATAGAT 59.303 38.462 11.47 0.00 36.67 1.98
567 573 7.222805 CGTTCCATAATGTAGCGCATATAGATT 59.777 37.037 11.47 6.47 36.67 2.40
568 574 8.883731 GTTCCATAATGTAGCGCATATAGATTT 58.116 33.333 11.47 0.00 36.67 2.17
569 575 9.448438 TTCCATAATGTAGCGCATATAGATTTT 57.552 29.630 11.47 0.00 36.67 1.82
570 576 9.098355 TCCATAATGTAGCGCATATAGATTTTC 57.902 33.333 11.47 0.00 36.67 2.29
571 577 9.102757 CCATAATGTAGCGCATATAGATTTTCT 57.897 33.333 11.47 0.00 36.67 2.52
575 581 9.489084 AATGTAGCGCATATAGATTTTCTACAA 57.511 29.630 11.47 0.00 38.67 2.41
576 582 8.880878 TGTAGCGCATATAGATTTTCTACAAA 57.119 30.769 11.47 0.00 34.20 2.83
577 583 8.978539 TGTAGCGCATATAGATTTTCTACAAAG 58.021 33.333 11.47 0.00 34.20 2.77
578 584 8.979574 GTAGCGCATATAGATTTTCTACAAAGT 58.020 33.333 11.47 0.00 30.79 2.66
579 585 8.077836 AGCGCATATAGATTTTCTACAAAGTC 57.922 34.615 11.47 0.00 30.79 3.01
580 586 7.710907 AGCGCATATAGATTTTCTACAAAGTCA 59.289 33.333 11.47 0.00 32.03 3.41
581 587 8.335356 GCGCATATAGATTTTCTACAAAGTCAA 58.665 33.333 0.30 0.00 32.03 3.18
676 682 9.936759 TGAAAGTATGTGTTGTGATGTATCTAA 57.063 29.630 0.00 0.00 0.00 2.10
678 684 8.425577 AAGTATGTGTTGTGATGTATCTAAGC 57.574 34.615 0.00 0.00 0.00 3.09
679 685 7.555965 AGTATGTGTTGTGATGTATCTAAGCA 58.444 34.615 0.00 0.00 0.00 3.91
680 686 6.668541 ATGTGTTGTGATGTATCTAAGCAC 57.331 37.500 0.00 0.00 0.00 4.40
681 687 5.546526 TGTGTTGTGATGTATCTAAGCACA 58.453 37.500 10.51 10.51 37.66 4.57
682 688 5.408299 TGTGTTGTGATGTATCTAAGCACAC 59.592 40.000 0.00 0.00 38.98 3.82
683 689 4.625311 TGTTGTGATGTATCTAAGCACACG 59.375 41.667 0.00 0.00 38.98 4.49
684 690 4.450082 TGTGATGTATCTAAGCACACGT 57.550 40.909 0.00 0.00 34.85 4.49
685 691 5.570234 TGTGATGTATCTAAGCACACGTA 57.430 39.130 0.00 0.00 34.85 3.57
686 692 6.144078 TGTGATGTATCTAAGCACACGTAT 57.856 37.500 0.00 0.00 34.85 3.06
687 693 6.569780 TGTGATGTATCTAAGCACACGTATT 58.430 36.000 0.00 0.00 34.85 1.89
688 694 7.039270 TGTGATGTATCTAAGCACACGTATTT 58.961 34.615 0.00 0.00 34.85 1.40
689 695 7.010091 TGTGATGTATCTAAGCACACGTATTTG 59.990 37.037 0.00 0.00 34.85 2.32
690 696 6.478673 TGATGTATCTAAGCACACGTATTTGG 59.521 38.462 0.00 0.00 0.00 3.28
691 697 5.726397 TGTATCTAAGCACACGTATTTGGT 58.274 37.500 0.00 0.00 0.00 3.67
692 698 6.865411 TGTATCTAAGCACACGTATTTGGTA 58.135 36.000 0.00 0.00 0.00 3.25
693 699 7.494211 TGTATCTAAGCACACGTATTTGGTAT 58.506 34.615 0.00 0.00 0.00 2.73
694 700 7.982919 TGTATCTAAGCACACGTATTTGGTATT 59.017 33.333 0.00 0.00 0.00 1.89
695 701 6.897259 TCTAAGCACACGTATTTGGTATTC 57.103 37.500 0.00 0.00 0.00 1.75
696 702 6.636705 TCTAAGCACACGTATTTGGTATTCT 58.363 36.000 0.00 0.00 0.00 2.40
697 703 7.774134 TCTAAGCACACGTATTTGGTATTCTA 58.226 34.615 0.00 0.00 0.00 2.10
698 704 6.903883 AAGCACACGTATTTGGTATTCTAG 57.096 37.500 0.00 0.00 0.00 2.43
699 705 6.216801 AGCACACGTATTTGGTATTCTAGA 57.783 37.500 0.00 0.00 0.00 2.43
700 706 6.817184 AGCACACGTATTTGGTATTCTAGAT 58.183 36.000 0.00 0.00 0.00 1.98
701 707 6.701841 AGCACACGTATTTGGTATTCTAGATG 59.298 38.462 0.00 0.00 0.00 2.90
702 708 6.479001 GCACACGTATTTGGTATTCTAGATGT 59.521 38.462 0.00 0.00 0.00 3.06
703 709 7.650504 GCACACGTATTTGGTATTCTAGATGTA 59.349 37.037 0.00 0.00 0.00 2.29
704 710 9.692749 CACACGTATTTGGTATTCTAGATGTAT 57.307 33.333 0.00 0.00 0.00 2.29
729 735 9.739276 ATATGATTTTCTCTACAAACTTGGTCA 57.261 29.630 0.00 0.00 0.00 4.02
730 736 7.873719 TGATTTTCTCTACAAACTTGGTCAA 57.126 32.000 0.00 0.00 0.00 3.18
731 737 8.287439 TGATTTTCTCTACAAACTTGGTCAAA 57.713 30.769 0.00 0.00 0.00 2.69
732 738 8.405531 TGATTTTCTCTACAAACTTGGTCAAAG 58.594 33.333 0.00 0.00 42.07 2.77
769 775 9.716507 TTGACTTCTAGAAAAATTTATATGCGC 57.283 29.630 6.63 0.00 0.00 6.09
770 776 9.109393 TGACTTCTAGAAAAATTTATATGCGCT 57.891 29.630 9.73 0.00 0.00 5.92
778 784 9.236691 AGAAAAATTTATATGCGCTACATTGTG 57.763 29.630 9.73 0.00 40.38 3.33
779 785 7.928908 AAAATTTATATGCGCTACATTGTGG 57.071 32.000 9.73 0.00 40.38 4.17
780 786 6.875948 AATTTATATGCGCTACATTGTGGA 57.124 33.333 9.73 0.00 40.38 4.02
781 787 6.875948 ATTTATATGCGCTACATTGTGGAA 57.124 33.333 9.73 0.00 40.38 3.53
782 788 5.666969 TTATATGCGCTACATTGTGGAAC 57.333 39.130 9.73 0.00 40.38 3.62
783 789 0.726827 ATGCGCTACATTGTGGAACG 59.273 50.000 9.73 0.38 42.39 3.95
784 790 1.295357 TGCGCTACATTGTGGAACGG 61.295 55.000 9.73 0.00 42.39 4.44
785 791 1.017177 GCGCTACATTGTGGAACGGA 61.017 55.000 0.00 0.00 42.39 4.69
786 792 0.999406 CGCTACATTGTGGAACGGAG 59.001 55.000 4.11 0.00 42.39 4.63
787 793 1.369625 GCTACATTGTGGAACGGAGG 58.630 55.000 4.11 0.00 42.39 4.30
788 794 2.012051 GCTACATTGTGGAACGGAGGG 61.012 57.143 4.11 0.00 42.39 4.30
789 795 1.553248 CTACATTGTGGAACGGAGGGA 59.447 52.381 0.00 0.00 42.39 4.20
790 796 0.324943 ACATTGTGGAACGGAGGGAG 59.675 55.000 0.00 0.00 42.39 4.30
791 797 0.324943 CATTGTGGAACGGAGGGAGT 59.675 55.000 0.00 0.00 42.39 3.85
792 798 1.553248 CATTGTGGAACGGAGGGAGTA 59.447 52.381 0.00 0.00 42.39 2.59
844 870 5.464389 TGCATGACGAATCACTTGATCATAG 59.536 40.000 0.00 0.00 37.79 2.23
867 893 2.477375 GCACGTGATCGAAAACCAACTA 59.523 45.455 22.23 0.00 40.62 2.24
868 894 3.124636 GCACGTGATCGAAAACCAACTAT 59.875 43.478 22.23 0.00 40.62 2.12
869 895 4.327898 GCACGTGATCGAAAACCAACTATA 59.672 41.667 22.23 0.00 40.62 1.31
870 896 5.006358 GCACGTGATCGAAAACCAACTATAT 59.994 40.000 22.23 0.00 40.62 0.86
871 897 6.199531 GCACGTGATCGAAAACCAACTATATA 59.800 38.462 22.23 0.00 40.62 0.86
872 898 7.567048 GCACGTGATCGAAAACCAACTATATAG 60.567 40.741 22.23 8.27 40.62 1.31
873 899 7.434307 CACGTGATCGAAAACCAACTATATAGT 59.566 37.037 10.90 9.71 40.62 2.12
874 900 8.623903 ACGTGATCGAAAACCAACTATATAGTA 58.376 33.333 15.74 0.00 40.62 1.82
875 901 8.899776 CGTGATCGAAAACCAACTATATAGTAC 58.100 37.037 15.74 4.95 39.71 2.73
876 902 9.962783 GTGATCGAAAACCAACTATATAGTACT 57.037 33.333 15.74 0.00 34.99 2.73
877 903 9.961265 TGATCGAAAACCAACTATATAGTACTG 57.039 33.333 15.74 11.05 34.99 2.74
878 904 9.962783 GATCGAAAACCAACTATATAGTACTGT 57.037 33.333 15.74 10.21 34.99 3.55
906 932 6.751514 AAATTAGCACGTGATCATAAACCA 57.248 33.333 22.23 0.00 0.00 3.67
907 933 6.751514 AATTAGCACGTGATCATAAACCAA 57.248 33.333 22.23 1.12 0.00 3.67
908 934 5.539582 TTAGCACGTGATCATAAACCAAC 57.460 39.130 22.23 0.00 0.00 3.77
909 935 3.674997 AGCACGTGATCATAAACCAACT 58.325 40.909 22.23 0.00 0.00 3.16
945 980 6.094061 CAGTAGTACTGTGAAAAGTCTAGCC 58.906 44.000 20.29 0.00 41.19 3.93
1047 1089 3.569049 CTGGTCGAGCCCGTTCGTT 62.569 63.158 12.85 0.00 41.22 3.85
1225 1279 1.424493 GCAGCTCATCGTGCAGTACC 61.424 60.000 0.00 0.00 39.62 3.34
1458 1521 0.115152 CCAAGGGGAAGGGCTTCTTT 59.885 55.000 0.00 0.00 39.45 2.52
1985 2052 5.700832 GCCATCCATAAGTAACATGATTCGA 59.299 40.000 0.00 0.00 0.00 3.71
2023 2090 4.569162 CACCGCGGATTTATTTCTTACAGA 59.431 41.667 35.90 0.00 0.00 3.41
2025 2092 4.809426 CCGCGGATTTATTTCTTACAGAGT 59.191 41.667 24.07 0.00 0.00 3.24
2097 2164 1.228769 TACCACGCAGGAGACCAGT 60.229 57.895 0.93 0.00 41.22 4.00
2101 2168 0.532862 CACGCAGGAGACCAGTGTTT 60.533 55.000 0.00 0.00 0.00 2.83
2114 2181 2.224867 CCAGTGTTTGATCCCTGGTTCT 60.225 50.000 0.00 0.00 39.70 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.734942 GCCGGTGAAAATCGAGTCGA 60.735 55.000 19.06 19.06 41.13 4.20
1 2 1.011968 TGCCGGTGAAAATCGAGTCG 61.012 55.000 6.09 6.09 0.00 4.18
4 5 1.156736 AGTTGCCGGTGAAAATCGAG 58.843 50.000 1.90 0.00 0.00 4.04
5 6 2.459060 TAGTTGCCGGTGAAAATCGA 57.541 45.000 1.90 0.00 0.00 3.59
6 7 2.418628 ACATAGTTGCCGGTGAAAATCG 59.581 45.455 1.90 0.00 0.00 3.34
7 8 3.181500 GGACATAGTTGCCGGTGAAAATC 60.181 47.826 1.90 0.00 0.00 2.17
9 10 2.156098 GGACATAGTTGCCGGTGAAAA 58.844 47.619 1.90 0.00 0.00 2.29
10 11 1.612199 GGGACATAGTTGCCGGTGAAA 60.612 52.381 1.90 0.00 0.00 2.69
12 13 1.600107 GGGACATAGTTGCCGGTGA 59.400 57.895 1.90 0.00 0.00 4.02
13 14 1.451387 GGGGACATAGTTGCCGGTG 60.451 63.158 1.90 0.00 0.00 4.94
16 17 2.203015 CGGGGGACATAGTTGCCG 60.203 66.667 0.00 0.00 0.00 5.69
17 18 2.192175 CCGGGGGACATAGTTGCC 59.808 66.667 0.00 0.00 0.00 4.52
18 19 2.516225 GCCGGGGGACATAGTTGC 60.516 66.667 2.18 0.00 0.00 4.17
19 20 1.146263 GAGCCGGGGGACATAGTTG 59.854 63.158 2.18 0.00 0.00 3.16
21 22 2.838225 CGAGCCGGGGGACATAGT 60.838 66.667 2.18 0.00 0.00 2.12
22 23 4.301027 GCGAGCCGGGGGACATAG 62.301 72.222 2.18 0.00 0.00 2.23
34 35 4.577246 CTAGTCCCGGCTGCGAGC 62.577 72.222 0.00 0.11 41.46 5.03
35 36 2.196925 ATCTAGTCCCGGCTGCGAG 61.197 63.158 0.00 0.00 0.00 5.03
36 37 2.123854 ATCTAGTCCCGGCTGCGA 60.124 61.111 0.00 0.00 0.00 5.10
37 38 2.028190 CATCTAGTCCCGGCTGCG 59.972 66.667 0.00 0.00 0.00 5.18
38 39 1.068250 GTCATCTAGTCCCGGCTGC 59.932 63.158 0.00 0.00 0.00 5.25
39 40 1.360551 CGTCATCTAGTCCCGGCTG 59.639 63.158 0.00 0.00 0.00 4.85
40 41 1.828660 CCGTCATCTAGTCCCGGCT 60.829 63.158 0.00 0.00 0.00 5.52
41 42 1.179814 ATCCGTCATCTAGTCCCGGC 61.180 60.000 0.00 0.00 38.54 6.13
42 43 0.882474 GATCCGTCATCTAGTCCCGG 59.118 60.000 0.00 0.00 39.98 5.73
43 44 1.807742 GAGATCCGTCATCTAGTCCCG 59.192 57.143 0.00 0.00 42.48 5.14
44 45 2.865079 TGAGATCCGTCATCTAGTCCC 58.135 52.381 0.00 0.00 42.48 4.46
45 46 4.138290 TCTTGAGATCCGTCATCTAGTCC 58.862 47.826 0.00 0.00 42.48 3.85
46 47 5.957842 ATCTTGAGATCCGTCATCTAGTC 57.042 43.478 0.00 0.00 42.48 2.59
47 48 5.049060 CGAATCTTGAGATCCGTCATCTAGT 60.049 44.000 0.00 0.00 42.48 2.57
48 49 5.180304 TCGAATCTTGAGATCCGTCATCTAG 59.820 44.000 0.00 0.00 42.48 2.43
49 50 5.049336 GTCGAATCTTGAGATCCGTCATCTA 60.049 44.000 0.00 0.00 42.48 1.98
50 51 3.885901 TCGAATCTTGAGATCCGTCATCT 59.114 43.478 0.00 0.00 45.41 2.90
51 52 3.978217 GTCGAATCTTGAGATCCGTCATC 59.022 47.826 0.00 0.00 33.86 2.92
52 53 3.243569 GGTCGAATCTTGAGATCCGTCAT 60.244 47.826 0.00 0.00 33.86 3.06
53 54 2.099263 GGTCGAATCTTGAGATCCGTCA 59.901 50.000 0.00 0.00 33.86 4.35
54 55 2.099263 TGGTCGAATCTTGAGATCCGTC 59.901 50.000 0.00 0.00 33.86 4.79
55 56 2.100197 TGGTCGAATCTTGAGATCCGT 58.900 47.619 0.00 0.00 33.86 4.69
56 57 2.860735 GTTGGTCGAATCTTGAGATCCG 59.139 50.000 0.00 0.00 33.42 4.18
57 58 4.130286 AGTTGGTCGAATCTTGAGATCC 57.870 45.455 0.00 0.00 32.75 3.36
58 59 6.137794 TCTAGTTGGTCGAATCTTGAGATC 57.862 41.667 0.00 0.00 32.75 2.75
59 60 6.531503 TTCTAGTTGGTCGAATCTTGAGAT 57.468 37.500 0.00 0.00 36.07 2.75
60 61 5.977489 TTCTAGTTGGTCGAATCTTGAGA 57.023 39.130 0.00 0.00 0.00 3.27
61 62 6.813649 TGATTTCTAGTTGGTCGAATCTTGAG 59.186 38.462 0.00 0.00 0.00 3.02
62 63 6.697395 TGATTTCTAGTTGGTCGAATCTTGA 58.303 36.000 0.00 0.00 0.00 3.02
63 64 6.591834 ACTGATTTCTAGTTGGTCGAATCTTG 59.408 38.462 0.00 0.00 0.00 3.02
64 65 6.702329 ACTGATTTCTAGTTGGTCGAATCTT 58.298 36.000 0.00 0.00 0.00 2.40
65 66 6.287589 ACTGATTTCTAGTTGGTCGAATCT 57.712 37.500 0.00 0.00 0.00 2.40
66 67 6.969828 AACTGATTTCTAGTTGGTCGAATC 57.030 37.500 0.00 0.00 37.03 2.52
67 68 6.348540 GCAAACTGATTTCTAGTTGGTCGAAT 60.349 38.462 0.00 0.00 38.32 3.34
68 69 5.049680 GCAAACTGATTTCTAGTTGGTCGAA 60.050 40.000 0.00 0.00 38.32 3.71
69 70 4.451096 GCAAACTGATTTCTAGTTGGTCGA 59.549 41.667 0.00 0.00 38.32 4.20
70 71 4.213270 TGCAAACTGATTTCTAGTTGGTCG 59.787 41.667 0.00 0.00 38.32 4.79
71 72 5.452777 GTGCAAACTGATTTCTAGTTGGTC 58.547 41.667 0.00 0.00 38.32 4.02
72 73 4.024048 CGTGCAAACTGATTTCTAGTTGGT 60.024 41.667 0.00 0.00 38.32 3.67
73 74 4.024048 ACGTGCAAACTGATTTCTAGTTGG 60.024 41.667 0.00 0.00 38.32 3.77
74 75 4.905866 CACGTGCAAACTGATTTCTAGTTG 59.094 41.667 0.82 0.00 38.32 3.16
75 76 4.024048 CCACGTGCAAACTGATTTCTAGTT 60.024 41.667 10.91 0.00 39.92 2.24
76 77 3.498397 CCACGTGCAAACTGATTTCTAGT 59.502 43.478 10.91 0.00 0.00 2.57
77 78 3.498397 ACCACGTGCAAACTGATTTCTAG 59.502 43.478 10.91 0.00 0.00 2.43
78 79 3.249799 CACCACGTGCAAACTGATTTCTA 59.750 43.478 10.91 0.00 0.00 2.10
79 80 2.033299 CACCACGTGCAAACTGATTTCT 59.967 45.455 10.91 0.00 0.00 2.52
80 81 2.032799 TCACCACGTGCAAACTGATTTC 59.967 45.455 10.91 0.00 32.98 2.17
81 82 2.020720 TCACCACGTGCAAACTGATTT 58.979 42.857 10.91 0.00 32.98 2.17
82 83 1.603802 CTCACCACGTGCAAACTGATT 59.396 47.619 10.91 0.00 32.98 2.57
86 87 1.967319 ATTCTCACCACGTGCAAACT 58.033 45.000 10.91 0.00 32.98 2.66
115 116 2.093075 TGTTGTAAAAGTCCACCGTCCA 60.093 45.455 0.00 0.00 0.00 4.02
117 118 2.288729 GGTGTTGTAAAAGTCCACCGTC 59.711 50.000 0.00 0.00 36.55 4.79
121 122 1.333435 CGCGGTGTTGTAAAAGTCCAC 60.333 52.381 0.00 0.00 0.00 4.02
122 123 0.938713 CGCGGTGTTGTAAAAGTCCA 59.061 50.000 0.00 0.00 0.00 4.02
136 142 2.489971 TCTTTCTTCATTCAACGCGGT 58.510 42.857 12.47 0.00 0.00 5.68
138 144 5.864830 TTTTTCTTTCTTCATTCAACGCG 57.135 34.783 3.53 3.53 0.00 6.01
160 166 1.647084 GACTGGCGCGTTTGAACTT 59.353 52.632 8.43 0.00 0.00 2.66
161 167 2.251642 GGACTGGCGCGTTTGAACT 61.252 57.895 8.43 0.00 0.00 3.01
162 168 1.852067 ATGGACTGGCGCGTTTGAAC 61.852 55.000 8.43 0.00 0.00 3.18
164 170 1.017177 GTATGGACTGGCGCGTTTGA 61.017 55.000 8.43 0.00 0.00 2.69
165 171 1.019278 AGTATGGACTGGCGCGTTTG 61.019 55.000 8.43 0.00 33.41 2.93
166 172 0.321298 AAGTATGGACTGGCGCGTTT 60.321 50.000 8.43 0.00 35.52 3.60
173 179 1.094785 CCCGCAAAAGTATGGACTGG 58.905 55.000 0.00 0.00 35.52 4.00
175 181 1.679032 GCTCCCGCAAAAGTATGGACT 60.679 52.381 0.00 0.00 34.79 3.85
197 203 4.446371 CTGACTTATTACAGCCCCTCAAG 58.554 47.826 0.00 0.00 0.00 3.02
210 216 7.630082 TCCCACAAGTATTAAGCTGACTTATT 58.370 34.615 0.00 0.00 38.18 1.40
211 217 7.195374 TCCCACAAGTATTAAGCTGACTTAT 57.805 36.000 0.00 0.00 38.18 1.73
212 218 6.614694 TCCCACAAGTATTAAGCTGACTTA 57.385 37.500 0.00 0.00 37.33 2.24
213 219 5.499004 TCCCACAAGTATTAAGCTGACTT 57.501 39.130 0.00 0.00 40.07 3.01
214 220 5.013183 AGTTCCCACAAGTATTAAGCTGACT 59.987 40.000 0.00 0.00 0.00 3.41
215 221 5.246307 AGTTCCCACAAGTATTAAGCTGAC 58.754 41.667 0.00 0.00 0.00 3.51
216 222 5.499004 AGTTCCCACAAGTATTAAGCTGA 57.501 39.130 0.00 0.00 0.00 4.26
217 223 5.940470 AGAAGTTCCCACAAGTATTAAGCTG 59.060 40.000 0.00 0.00 0.00 4.24
218 224 6.128138 AGAAGTTCCCACAAGTATTAAGCT 57.872 37.500 0.00 0.00 0.00 3.74
219 225 6.819397 AAGAAGTTCCCACAAGTATTAAGC 57.181 37.500 0.00 0.00 0.00 3.09
220 226 8.718734 GTGTAAGAAGTTCCCACAAGTATTAAG 58.281 37.037 8.33 0.00 0.00 1.85
221 227 7.662669 GGTGTAAGAAGTTCCCACAAGTATTAA 59.337 37.037 15.65 0.00 0.00 1.40
222 228 7.163441 GGTGTAAGAAGTTCCCACAAGTATTA 58.837 38.462 15.65 0.00 0.00 0.98
223 229 6.002082 GGTGTAAGAAGTTCCCACAAGTATT 58.998 40.000 15.65 0.00 0.00 1.89
224 230 5.557866 GGTGTAAGAAGTTCCCACAAGTAT 58.442 41.667 15.65 0.00 0.00 2.12
225 231 4.501915 CGGTGTAAGAAGTTCCCACAAGTA 60.502 45.833 15.65 0.00 0.00 2.24
226 232 3.743269 CGGTGTAAGAAGTTCCCACAAGT 60.743 47.826 15.65 0.00 0.00 3.16
227 233 2.806244 CGGTGTAAGAAGTTCCCACAAG 59.194 50.000 15.65 7.88 0.00 3.16
228 234 2.841215 CGGTGTAAGAAGTTCCCACAA 58.159 47.619 15.65 0.00 0.00 3.33
229 235 1.541670 GCGGTGTAAGAAGTTCCCACA 60.542 52.381 15.65 10.35 0.00 4.17
230 236 1.154197 GCGGTGTAAGAAGTTCCCAC 58.846 55.000 0.00 4.50 0.00 4.61
231 237 1.053424 AGCGGTGTAAGAAGTTCCCA 58.947 50.000 0.00 0.00 0.00 4.37
232 238 2.074576 GAAGCGGTGTAAGAAGTTCCC 58.925 52.381 0.00 0.00 0.00 3.97
233 239 1.725164 CGAAGCGGTGTAAGAAGTTCC 59.275 52.381 0.00 0.00 0.00 3.62
253 259 0.599204 TCTCGGACGGTTGTTGAAGC 60.599 55.000 0.00 0.00 0.00 3.86
254 260 1.860676 TTCTCGGACGGTTGTTGAAG 58.139 50.000 0.00 0.00 0.00 3.02
255 261 2.206750 CTTTCTCGGACGGTTGTTGAA 58.793 47.619 0.00 0.00 0.00 2.69
256 262 1.539496 CCTTTCTCGGACGGTTGTTGA 60.539 52.381 0.00 0.00 0.00 3.18
257 263 0.865769 CCTTTCTCGGACGGTTGTTG 59.134 55.000 0.00 0.00 0.00 3.33
258 264 0.883370 GCCTTTCTCGGACGGTTGTT 60.883 55.000 0.00 0.00 0.00 2.83
259 265 1.301479 GCCTTTCTCGGACGGTTGT 60.301 57.895 0.00 0.00 0.00 3.32
260 266 2.380410 CGCCTTTCTCGGACGGTTG 61.380 63.158 0.00 0.00 0.00 3.77
261 267 1.885163 ATCGCCTTTCTCGGACGGTT 61.885 55.000 0.00 0.00 0.00 4.44
262 268 1.885163 AATCGCCTTTCTCGGACGGT 61.885 55.000 0.00 0.00 0.00 4.83
263 269 1.153628 AATCGCCTTTCTCGGACGG 60.154 57.895 0.00 0.00 0.00 4.79
264 270 1.421410 CCAATCGCCTTTCTCGGACG 61.421 60.000 0.00 0.00 0.00 4.79
265 271 1.090052 CCCAATCGCCTTTCTCGGAC 61.090 60.000 0.00 0.00 0.00 4.79
266 272 1.220749 CCCAATCGCCTTTCTCGGA 59.779 57.895 0.00 0.00 0.00 4.55
267 273 0.676782 AACCCAATCGCCTTTCTCGG 60.677 55.000 0.00 0.00 0.00 4.63
268 274 0.447801 CAACCCAATCGCCTTTCTCG 59.552 55.000 0.00 0.00 0.00 4.04
269 275 0.811281 CCAACCCAATCGCCTTTCTC 59.189 55.000 0.00 0.00 0.00 2.87
270 276 1.250840 GCCAACCCAATCGCCTTTCT 61.251 55.000 0.00 0.00 0.00 2.52
271 277 1.215382 GCCAACCCAATCGCCTTTC 59.785 57.895 0.00 0.00 0.00 2.62
272 278 2.635443 CGCCAACCCAATCGCCTTT 61.635 57.895 0.00 0.00 0.00 3.11
273 279 3.061848 CGCCAACCCAATCGCCTT 61.062 61.111 0.00 0.00 0.00 4.35
274 280 3.561120 TTCGCCAACCCAATCGCCT 62.561 57.895 0.00 0.00 0.00 5.52
275 281 3.059386 TTCGCCAACCCAATCGCC 61.059 61.111 0.00 0.00 0.00 5.54
276 282 2.178273 GTTCGCCAACCCAATCGC 59.822 61.111 0.00 0.00 0.00 4.58
277 283 2.874751 GGTTCGCCAACCCAATCG 59.125 61.111 1.07 0.00 46.01 3.34
295 301 4.400961 ACGAAGGCTGGGAGCAGC 62.401 66.667 0.00 0.00 44.75 5.25
296 302 2.125350 GACGAAGGCTGGGAGCAG 60.125 66.667 0.00 0.00 44.75 4.24
297 303 3.706373 GGACGAAGGCTGGGAGCA 61.706 66.667 0.00 0.00 44.75 4.26
298 304 3.706373 TGGACGAAGGCTGGGAGC 61.706 66.667 0.00 0.00 41.46 4.70
299 305 2.266055 GTGGACGAAGGCTGGGAG 59.734 66.667 0.00 0.00 0.00 4.30
300 306 3.691342 CGTGGACGAAGGCTGGGA 61.691 66.667 0.00 0.00 43.02 4.37
301 307 3.934391 GACGTGGACGAAGGCTGGG 62.934 68.421 6.12 0.00 43.02 4.45
302 308 2.432628 GACGTGGACGAAGGCTGG 60.433 66.667 6.12 0.00 43.02 4.85
303 309 2.805353 CGACGTGGACGAAGGCTG 60.805 66.667 6.12 0.00 43.02 4.85
304 310 4.719369 GCGACGTGGACGAAGGCT 62.719 66.667 6.12 0.00 43.02 4.58
327 333 3.462678 GACCGAGGAGGCAGGGAC 61.463 72.222 0.00 0.00 46.52 4.46
330 336 3.827898 GACGACCGAGGAGGCAGG 61.828 72.222 0.00 0.00 46.52 4.85
331 337 1.030488 TAAGACGACCGAGGAGGCAG 61.030 60.000 0.00 0.00 46.52 4.85
332 338 0.395311 ATAAGACGACCGAGGAGGCA 60.395 55.000 0.00 0.00 46.52 4.75
333 339 0.311477 GATAAGACGACCGAGGAGGC 59.689 60.000 0.00 0.00 46.52 4.70
340 346 0.248377 GTCACCGGATAAGACGACCG 60.248 60.000 9.46 0.00 45.24 4.79
341 347 1.101331 AGTCACCGGATAAGACGACC 58.899 55.000 9.46 0.00 37.36 4.79
342 348 1.202268 CCAGTCACCGGATAAGACGAC 60.202 57.143 9.46 2.75 37.36 4.34
343 349 1.100510 CCAGTCACCGGATAAGACGA 58.899 55.000 9.46 0.00 37.36 4.20
344 350 1.065701 CTCCAGTCACCGGATAAGACG 59.934 57.143 9.46 7.12 37.36 4.18
345 351 1.409427 CCTCCAGTCACCGGATAAGAC 59.591 57.143 9.46 10.70 0.00 3.01
346 352 1.688311 CCCTCCAGTCACCGGATAAGA 60.688 57.143 9.46 0.00 0.00 2.10
347 353 0.753262 CCCTCCAGTCACCGGATAAG 59.247 60.000 9.46 0.00 0.00 1.73
348 354 0.689745 CCCCTCCAGTCACCGGATAA 60.690 60.000 9.46 0.00 0.00 1.75
349 355 1.075525 CCCCTCCAGTCACCGGATA 60.076 63.158 9.46 0.00 0.00 2.59
350 356 2.365635 CCCCTCCAGTCACCGGAT 60.366 66.667 9.46 0.00 0.00 4.18
351 357 4.715130 CCCCCTCCAGTCACCGGA 62.715 72.222 9.46 0.00 0.00 5.14
353 359 3.706373 CACCCCCTCCAGTCACCG 61.706 72.222 0.00 0.00 0.00 4.94
354 360 3.330720 CCACCCCCTCCAGTCACC 61.331 72.222 0.00 0.00 0.00 4.02
355 361 3.330720 CCCACCCCCTCCAGTCAC 61.331 72.222 0.00 0.00 0.00 3.67
356 362 4.675303 CCCCACCCCCTCCAGTCA 62.675 72.222 0.00 0.00 0.00 3.41
357 363 4.348495 TCCCCACCCCCTCCAGTC 62.348 72.222 0.00 0.00 0.00 3.51
358 364 4.677151 GTCCCCACCCCCTCCAGT 62.677 72.222 0.00 0.00 0.00 4.00
361 367 4.695791 AAGGTCCCCACCCCCTCC 62.696 72.222 0.00 0.00 45.12 4.30
362 368 3.339093 CAAGGTCCCCACCCCCTC 61.339 72.222 0.00 0.00 45.12 4.30
365 371 3.979497 CACCAAGGTCCCCACCCC 61.979 72.222 0.00 0.00 45.12 4.95
366 372 1.800229 AATCACCAAGGTCCCCACCC 61.800 60.000 0.00 0.00 45.12 4.61
367 373 0.114364 AAATCACCAAGGTCCCCACC 59.886 55.000 0.00 0.00 44.19 4.61
368 374 1.256812 CAAATCACCAAGGTCCCCAC 58.743 55.000 0.00 0.00 0.00 4.61
369 375 0.114168 CCAAATCACCAAGGTCCCCA 59.886 55.000 0.00 0.00 0.00 4.96
370 376 1.257750 GCCAAATCACCAAGGTCCCC 61.258 60.000 0.00 0.00 0.00 4.81
371 377 0.251787 AGCCAAATCACCAAGGTCCC 60.252 55.000 0.00 0.00 0.00 4.46
372 378 0.890683 CAGCCAAATCACCAAGGTCC 59.109 55.000 0.00 0.00 0.00 4.46
373 379 0.890683 CCAGCCAAATCACCAAGGTC 59.109 55.000 0.00 0.00 0.00 3.85
374 380 0.188342 ACCAGCCAAATCACCAAGGT 59.812 50.000 0.00 0.00 0.00 3.50
375 381 0.604578 CACCAGCCAAATCACCAAGG 59.395 55.000 0.00 0.00 0.00 3.61
376 382 1.331214 ACACCAGCCAAATCACCAAG 58.669 50.000 0.00 0.00 0.00 3.61
377 383 2.158534 ACTACACCAGCCAAATCACCAA 60.159 45.455 0.00 0.00 0.00 3.67
378 384 1.423541 ACTACACCAGCCAAATCACCA 59.576 47.619 0.00 0.00 0.00 4.17
379 385 2.200373 ACTACACCAGCCAAATCACC 57.800 50.000 0.00 0.00 0.00 4.02
380 386 3.933332 GAGTACTACACCAGCCAAATCAC 59.067 47.826 0.00 0.00 0.00 3.06
381 387 3.055385 GGAGTACTACACCAGCCAAATCA 60.055 47.826 0.00 0.00 0.00 2.57
382 388 3.197983 AGGAGTACTACACCAGCCAAATC 59.802 47.826 8.10 0.00 30.76 2.17
383 389 3.182152 AGGAGTACTACACCAGCCAAAT 58.818 45.455 8.10 0.00 30.76 2.32
384 390 2.616524 AGGAGTACTACACCAGCCAAA 58.383 47.619 8.10 0.00 30.76 3.28
385 391 2.320681 AGGAGTACTACACCAGCCAA 57.679 50.000 8.10 0.00 30.76 4.52
386 392 2.176889 GAAGGAGTACTACACCAGCCA 58.823 52.381 8.10 0.00 30.76 4.75
387 393 2.166664 CAGAAGGAGTACTACACCAGCC 59.833 54.545 8.10 0.00 30.76 4.85
388 394 2.166664 CCAGAAGGAGTACTACACCAGC 59.833 54.545 8.10 0.00 36.89 4.85
389 395 3.432378 ACCAGAAGGAGTACTACACCAG 58.568 50.000 8.10 0.00 38.69 4.00
390 396 3.428532 GACCAGAAGGAGTACTACACCA 58.571 50.000 8.10 0.00 38.69 4.17
391 397 2.422832 CGACCAGAAGGAGTACTACACC 59.577 54.545 8.10 0.00 38.69 4.16
392 398 2.422832 CCGACCAGAAGGAGTACTACAC 59.577 54.545 8.10 0.85 38.69 2.90
393 399 2.040813 ACCGACCAGAAGGAGTACTACA 59.959 50.000 8.10 0.00 38.69 2.74
394 400 2.720915 ACCGACCAGAAGGAGTACTAC 58.279 52.381 0.00 0.00 38.69 2.73
395 401 3.350833 GAACCGACCAGAAGGAGTACTA 58.649 50.000 0.00 0.00 38.69 1.82
396 402 2.169330 GAACCGACCAGAAGGAGTACT 58.831 52.381 0.00 0.00 38.69 2.73
397 403 1.204231 GGAACCGACCAGAAGGAGTAC 59.796 57.143 0.00 0.00 38.69 2.73
398 404 1.203087 TGGAACCGACCAGAAGGAGTA 60.203 52.381 0.00 0.00 38.69 2.59
399 405 0.471211 TGGAACCGACCAGAAGGAGT 60.471 55.000 0.00 0.00 38.69 3.85
400 406 0.037232 GTGGAACCGACCAGAAGGAG 60.037 60.000 0.00 0.00 40.85 3.69
401 407 1.812686 CGTGGAACCGACCAGAAGGA 61.813 60.000 0.00 0.00 40.85 3.36
402 408 1.374252 CGTGGAACCGACCAGAAGG 60.374 63.158 0.00 0.00 40.85 3.46
403 409 0.944311 CACGTGGAACCGACCAGAAG 60.944 60.000 7.95 0.00 40.85 2.85
404 410 1.068417 CACGTGGAACCGACCAGAA 59.932 57.895 7.95 0.00 40.85 3.02
405 411 2.732016 CACGTGGAACCGACCAGA 59.268 61.111 7.95 0.00 40.85 3.86
406 412 3.041940 GCACGTGGAACCGACCAG 61.042 66.667 18.88 0.00 40.85 4.00
407 413 3.171828 ATGCACGTGGAACCGACCA 62.172 57.895 15.51 1.83 37.63 4.02
408 414 2.358247 ATGCACGTGGAACCGACC 60.358 61.111 15.51 0.00 0.00 4.79
409 415 2.860293 CATGCACGTGGAACCGAC 59.140 61.111 15.51 0.00 0.00 4.79
410 416 3.047280 GCATGCACGTGGAACCGA 61.047 61.111 15.51 0.00 0.00 4.69
411 417 2.128853 AAAGCATGCACGTGGAACCG 62.129 55.000 21.98 7.00 0.00 4.44
412 418 0.664166 CAAAGCATGCACGTGGAACC 60.664 55.000 21.98 8.06 0.00 3.62
413 419 0.030638 ACAAAGCATGCACGTGGAAC 59.969 50.000 21.98 9.71 0.00 3.62
414 420 1.598882 TACAAAGCATGCACGTGGAA 58.401 45.000 21.98 4.69 0.00 3.53
415 421 1.819928 ATACAAAGCATGCACGTGGA 58.180 45.000 21.98 16.39 0.00 4.02
416 422 2.162208 AGAATACAAAGCATGCACGTGG 59.838 45.455 21.98 4.61 0.00 4.94
417 423 3.476295 AGAATACAAAGCATGCACGTG 57.524 42.857 21.98 12.28 0.00 4.49
418 424 3.753272 AGAAGAATACAAAGCATGCACGT 59.247 39.130 21.98 15.52 0.00 4.49
419 425 4.346734 AGAAGAATACAAAGCATGCACG 57.653 40.909 21.98 9.99 0.00 5.34
420 426 8.693542 AAATAAGAAGAATACAAAGCATGCAC 57.306 30.769 21.98 0.67 0.00 4.57
421 427 8.742777 AGAAATAAGAAGAATACAAAGCATGCA 58.257 29.630 21.98 0.00 0.00 3.96
422 428 9.017669 CAGAAATAAGAAGAATACAAAGCATGC 57.982 33.333 10.51 10.51 0.00 4.06
444 450 9.256477 GGTAATCACGTGTATCATTAATCAGAA 57.744 33.333 16.51 0.00 0.00 3.02
445 451 8.638873 AGGTAATCACGTGTATCATTAATCAGA 58.361 33.333 16.51 0.00 0.00 3.27
446 452 8.818141 AGGTAATCACGTGTATCATTAATCAG 57.182 34.615 16.51 0.00 0.00 2.90
447 453 8.417884 TGAGGTAATCACGTGTATCATTAATCA 58.582 33.333 16.51 14.78 31.12 2.57
448 454 8.812147 TGAGGTAATCACGTGTATCATTAATC 57.188 34.615 16.51 12.77 31.12 1.75
449 455 9.607988 TTTGAGGTAATCACGTGTATCATTAAT 57.392 29.630 16.51 4.72 37.77 1.40
450 456 9.438228 TTTTGAGGTAATCACGTGTATCATTAA 57.562 29.630 16.51 3.50 37.77 1.40
451 457 9.607988 ATTTTGAGGTAATCACGTGTATCATTA 57.392 29.630 16.51 9.23 37.77 1.90
452 458 7.915293 TTTTGAGGTAATCACGTGTATCATT 57.085 32.000 16.51 10.26 37.77 2.57
453 459 9.607988 TTATTTTGAGGTAATCACGTGTATCAT 57.392 29.630 16.51 0.00 37.77 2.45
454 460 9.438228 TTTATTTTGAGGTAATCACGTGTATCA 57.562 29.630 16.51 8.87 37.77 2.15
458 464 8.626526 ACTTTTTATTTTGAGGTAATCACGTGT 58.373 29.630 16.51 0.00 37.77 4.49
459 465 9.113876 GACTTTTTATTTTGAGGTAATCACGTG 57.886 33.333 9.94 9.94 37.77 4.49
460 466 9.063615 AGACTTTTTATTTTGAGGTAATCACGT 57.936 29.630 0.00 0.00 37.77 4.49
461 467 9.329913 CAGACTTTTTATTTTGAGGTAATCACG 57.670 33.333 0.00 0.00 37.77 4.35
462 468 9.129209 GCAGACTTTTTATTTTGAGGTAATCAC 57.871 33.333 0.00 0.00 37.77 3.06
463 469 9.077885 AGCAGACTTTTTATTTTGAGGTAATCA 57.922 29.630 0.00 0.00 35.62 2.57
464 470 9.914131 AAGCAGACTTTTTATTTTGAGGTAATC 57.086 29.630 0.00 0.00 29.41 1.75
477 483 9.862371 CTCTCTCTGTATTAAGCAGACTTTTTA 57.138 33.333 8.04 0.00 37.98 1.52
478 484 7.333174 GCTCTCTCTGTATTAAGCAGACTTTTT 59.667 37.037 8.04 0.00 37.98 1.94
479 485 6.816140 GCTCTCTCTGTATTAAGCAGACTTTT 59.184 38.462 8.04 0.00 37.98 2.27
480 486 6.071108 TGCTCTCTCTGTATTAAGCAGACTTT 60.071 38.462 8.04 0.00 37.98 2.66
481 487 5.420421 TGCTCTCTCTGTATTAAGCAGACTT 59.580 40.000 8.04 0.00 37.98 3.01
482 488 4.952957 TGCTCTCTCTGTATTAAGCAGACT 59.047 41.667 8.04 0.00 37.98 3.24
493 499 3.690139 CGGTTTACTCTGCTCTCTCTGTA 59.310 47.826 0.00 0.00 0.00 2.74
501 507 1.291132 GGCATCGGTTTACTCTGCTC 58.709 55.000 0.00 0.00 33.43 4.26
527 533 2.829023 TGGAACGGAGGGAGTATTTCT 58.171 47.619 0.00 0.00 0.00 2.52
528 534 3.840124 ATGGAACGGAGGGAGTATTTC 57.160 47.619 0.00 0.00 0.00 2.17
529 535 5.132144 ACATTATGGAACGGAGGGAGTATTT 59.868 40.000 0.00 0.00 0.00 1.40
530 536 4.658901 ACATTATGGAACGGAGGGAGTATT 59.341 41.667 0.00 0.00 0.00 1.89
532 538 3.649843 ACATTATGGAACGGAGGGAGTA 58.350 45.455 0.00 0.00 0.00 2.59
533 539 2.478292 ACATTATGGAACGGAGGGAGT 58.522 47.619 0.00 0.00 0.00 3.85
534 540 3.555168 GCTACATTATGGAACGGAGGGAG 60.555 52.174 0.00 0.00 0.00 4.30
535 541 2.367567 GCTACATTATGGAACGGAGGGA 59.632 50.000 0.00 0.00 0.00 4.20
536 542 2.767505 GCTACATTATGGAACGGAGGG 58.232 52.381 0.00 0.00 0.00 4.30
537 543 2.404215 CGCTACATTATGGAACGGAGG 58.596 52.381 0.00 0.00 0.00 4.30
538 544 1.792949 GCGCTACATTATGGAACGGAG 59.207 52.381 0.00 0.00 0.00 4.63
539 545 1.137282 TGCGCTACATTATGGAACGGA 59.863 47.619 9.73 0.00 0.00 4.69
540 546 1.577468 TGCGCTACATTATGGAACGG 58.423 50.000 9.73 0.00 0.00 4.44
541 547 6.033966 TCTATATGCGCTACATTATGGAACG 58.966 40.000 9.73 0.00 40.38 3.95
542 548 8.425577 AATCTATATGCGCTACATTATGGAAC 57.574 34.615 9.73 0.00 40.38 3.62
543 549 9.448438 AAAATCTATATGCGCTACATTATGGAA 57.552 29.630 9.73 0.00 40.38 3.53
544 550 9.098355 GAAAATCTATATGCGCTACATTATGGA 57.902 33.333 9.73 6.23 40.38 3.41
545 551 9.102757 AGAAAATCTATATGCGCTACATTATGG 57.897 33.333 9.73 0.89 40.38 2.74
549 555 9.489084 TTGTAGAAAATCTATATGCGCTACATT 57.511 29.630 9.73 0.00 40.38 2.71
550 556 9.489084 TTTGTAGAAAATCTATATGCGCTACAT 57.511 29.630 9.73 1.21 43.18 2.29
551 557 8.880878 TTTGTAGAAAATCTATATGCGCTACA 57.119 30.769 9.73 0.63 36.25 2.74
552 558 8.979574 ACTTTGTAGAAAATCTATATGCGCTAC 58.020 33.333 9.73 0.00 30.76 3.58
553 559 9.193133 GACTTTGTAGAAAATCTATATGCGCTA 57.807 33.333 9.73 0.00 30.76 4.26
554 560 7.710907 TGACTTTGTAGAAAATCTATATGCGCT 59.289 33.333 9.73 0.00 30.76 5.92
555 561 7.851508 TGACTTTGTAGAAAATCTATATGCGC 58.148 34.615 0.00 0.00 30.76 6.09
650 656 9.936759 TTAGATACATCACAACACATACTTTCA 57.063 29.630 0.00 0.00 0.00 2.69
652 658 8.883731 GCTTAGATACATCACAACACATACTTT 58.116 33.333 0.00 0.00 0.00 2.66
653 659 8.040727 TGCTTAGATACATCACAACACATACTT 58.959 33.333 0.00 0.00 0.00 2.24
654 660 7.492669 GTGCTTAGATACATCACAACACATACT 59.507 37.037 0.00 0.00 0.00 2.12
655 661 7.277760 TGTGCTTAGATACATCACAACACATAC 59.722 37.037 0.00 0.00 35.08 2.39
656 662 7.277760 GTGTGCTTAGATACATCACAACACATA 59.722 37.037 0.00 0.00 39.07 2.29
657 663 6.092670 GTGTGCTTAGATACATCACAACACAT 59.907 38.462 0.00 0.00 39.07 3.21
658 664 5.408299 GTGTGCTTAGATACATCACAACACA 59.592 40.000 0.00 0.00 39.07 3.72
659 665 5.444613 CGTGTGCTTAGATACATCACAACAC 60.445 44.000 0.00 0.00 39.07 3.32
660 666 4.625311 CGTGTGCTTAGATACATCACAACA 59.375 41.667 0.00 0.00 39.07 3.33
661 667 4.625742 ACGTGTGCTTAGATACATCACAAC 59.374 41.667 0.00 0.00 39.07 3.32
662 668 4.816392 ACGTGTGCTTAGATACATCACAA 58.184 39.130 0.00 0.00 39.07 3.33
663 669 4.450082 ACGTGTGCTTAGATACATCACA 57.550 40.909 0.00 0.00 35.57 3.58
664 670 7.337718 CAAATACGTGTGCTTAGATACATCAC 58.662 38.462 0.00 0.00 0.00 3.06
665 671 6.478673 CCAAATACGTGTGCTTAGATACATCA 59.521 38.462 0.00 0.00 0.00 3.07
666 672 6.479001 ACCAAATACGTGTGCTTAGATACATC 59.521 38.462 0.00 0.00 0.00 3.06
667 673 6.346096 ACCAAATACGTGTGCTTAGATACAT 58.654 36.000 0.00 0.00 0.00 2.29
668 674 5.726397 ACCAAATACGTGTGCTTAGATACA 58.274 37.500 0.00 0.00 0.00 2.29
669 675 7.941795 ATACCAAATACGTGTGCTTAGATAC 57.058 36.000 0.00 0.00 0.00 2.24
670 676 8.418662 AGAATACCAAATACGTGTGCTTAGATA 58.581 33.333 0.00 0.00 0.00 1.98
671 677 7.272978 AGAATACCAAATACGTGTGCTTAGAT 58.727 34.615 0.00 0.00 0.00 1.98
672 678 6.636705 AGAATACCAAATACGTGTGCTTAGA 58.363 36.000 0.00 0.00 0.00 2.10
673 679 6.903883 AGAATACCAAATACGTGTGCTTAG 57.096 37.500 0.00 0.00 0.00 2.18
674 680 7.774134 TCTAGAATACCAAATACGTGTGCTTA 58.226 34.615 0.00 0.00 0.00 3.09
675 681 6.636705 TCTAGAATACCAAATACGTGTGCTT 58.363 36.000 0.00 0.00 0.00 3.91
676 682 6.216801 TCTAGAATACCAAATACGTGTGCT 57.783 37.500 0.00 0.00 0.00 4.40
677 683 6.479001 ACATCTAGAATACCAAATACGTGTGC 59.521 38.462 0.00 0.00 0.00 4.57
678 684 9.692749 ATACATCTAGAATACCAAATACGTGTG 57.307 33.333 0.00 0.00 0.00 3.82
703 709 9.739276 TGACCAAGTTTGTAGAGAAAATCATAT 57.261 29.630 0.00 0.00 0.00 1.78
704 710 9.567776 TTGACCAAGTTTGTAGAGAAAATCATA 57.432 29.630 0.00 0.00 0.00 2.15
705 711 8.463930 TTGACCAAGTTTGTAGAGAAAATCAT 57.536 30.769 0.00 0.00 0.00 2.45
706 712 7.873719 TTGACCAAGTTTGTAGAGAAAATCA 57.126 32.000 0.00 0.00 0.00 2.57
707 713 8.406297 ACTTTGACCAAGTTTGTAGAGAAAATC 58.594 33.333 0.00 0.00 43.89 2.17
708 714 8.293699 ACTTTGACCAAGTTTGTAGAGAAAAT 57.706 30.769 0.00 0.00 43.89 1.82
709 715 7.696992 ACTTTGACCAAGTTTGTAGAGAAAA 57.303 32.000 0.00 0.00 43.89 2.29
743 749 9.716507 GCGCATATAAATTTTTCTAGAAGTCAA 57.283 29.630 0.30 1.17 0.00 3.18
744 750 9.109393 AGCGCATATAAATTTTTCTAGAAGTCA 57.891 29.630 11.47 0.00 0.00 3.41
752 758 9.236691 CACAATGTAGCGCATATAAATTTTTCT 57.763 29.630 11.47 0.00 36.67 2.52
753 759 8.479280 CCACAATGTAGCGCATATAAATTTTTC 58.521 33.333 11.47 0.00 36.67 2.29
754 760 8.194104 TCCACAATGTAGCGCATATAAATTTTT 58.806 29.630 11.47 0.00 36.67 1.94
755 761 7.711846 TCCACAATGTAGCGCATATAAATTTT 58.288 30.769 11.47 0.00 36.67 1.82
756 762 7.270757 TCCACAATGTAGCGCATATAAATTT 57.729 32.000 11.47 0.00 36.67 1.82
757 763 6.875948 TCCACAATGTAGCGCATATAAATT 57.124 33.333 11.47 0.00 36.67 1.82
758 764 6.565811 CGTTCCACAATGTAGCGCATATAAAT 60.566 38.462 11.47 0.00 36.67 1.40
759 765 5.277106 CGTTCCACAATGTAGCGCATATAAA 60.277 40.000 11.47 0.00 36.67 1.40
760 766 4.210328 CGTTCCACAATGTAGCGCATATAA 59.790 41.667 11.47 0.00 36.67 0.98
761 767 3.738791 CGTTCCACAATGTAGCGCATATA 59.261 43.478 11.47 0.00 36.67 0.86
762 768 2.543848 CGTTCCACAATGTAGCGCATAT 59.456 45.455 11.47 0.00 36.67 1.78
763 769 1.930503 CGTTCCACAATGTAGCGCATA 59.069 47.619 11.47 0.00 36.67 3.14
764 770 0.726827 CGTTCCACAATGTAGCGCAT 59.273 50.000 11.47 0.00 40.03 4.73
765 771 1.295357 CCGTTCCACAATGTAGCGCA 61.295 55.000 11.47 0.00 0.00 6.09
766 772 1.017177 TCCGTTCCACAATGTAGCGC 61.017 55.000 0.00 0.00 0.00 5.92
767 773 0.999406 CTCCGTTCCACAATGTAGCG 59.001 55.000 0.00 0.00 0.00 4.26
768 774 1.369625 CCTCCGTTCCACAATGTAGC 58.630 55.000 0.00 0.00 0.00 3.58
769 775 1.553248 TCCCTCCGTTCCACAATGTAG 59.447 52.381 0.00 0.00 0.00 2.74
770 776 1.553248 CTCCCTCCGTTCCACAATGTA 59.447 52.381 0.00 0.00 0.00 2.29
771 777 0.324943 CTCCCTCCGTTCCACAATGT 59.675 55.000 0.00 0.00 0.00 2.71
772 778 0.324943 ACTCCCTCCGTTCCACAATG 59.675 55.000 0.00 0.00 0.00 2.82
773 779 1.553704 GTACTCCCTCCGTTCCACAAT 59.446 52.381 0.00 0.00 0.00 2.71
774 780 0.971386 GTACTCCCTCCGTTCCACAA 59.029 55.000 0.00 0.00 0.00 3.33
775 781 0.113776 AGTACTCCCTCCGTTCCACA 59.886 55.000 0.00 0.00 0.00 4.17
776 782 0.531200 CAGTACTCCCTCCGTTCCAC 59.469 60.000 0.00 0.00 0.00 4.02
777 783 0.406750 TCAGTACTCCCTCCGTTCCA 59.593 55.000 0.00 0.00 0.00 3.53
778 784 1.777941 ATCAGTACTCCCTCCGTTCC 58.222 55.000 0.00 0.00 0.00 3.62
779 785 2.293955 GCTATCAGTACTCCCTCCGTTC 59.706 54.545 0.00 0.00 0.00 3.95
780 786 2.308690 GCTATCAGTACTCCCTCCGTT 58.691 52.381 0.00 0.00 0.00 4.44
781 787 1.214673 TGCTATCAGTACTCCCTCCGT 59.785 52.381 0.00 0.00 0.00 4.69
782 788 1.982660 TGCTATCAGTACTCCCTCCG 58.017 55.000 0.00 0.00 0.00 4.63
783 789 3.707102 ACTTTGCTATCAGTACTCCCTCC 59.293 47.826 0.00 0.00 0.00 4.30
784 790 4.647399 AGACTTTGCTATCAGTACTCCCTC 59.353 45.833 0.00 0.00 0.00 4.30
785 791 4.404073 CAGACTTTGCTATCAGTACTCCCT 59.596 45.833 0.00 0.00 0.00 4.20
786 792 4.442192 CCAGACTTTGCTATCAGTACTCCC 60.442 50.000 0.00 0.00 0.00 4.30
787 793 4.688021 CCAGACTTTGCTATCAGTACTCC 58.312 47.826 0.00 0.00 0.00 3.85
788 794 4.116238 GCCAGACTTTGCTATCAGTACTC 58.884 47.826 0.00 0.00 0.00 2.59
789 795 3.772025 AGCCAGACTTTGCTATCAGTACT 59.228 43.478 0.00 0.00 35.69 2.73
790 796 4.116238 GAGCCAGACTTTGCTATCAGTAC 58.884 47.826 0.00 0.00 38.11 2.73
791 797 3.769300 TGAGCCAGACTTTGCTATCAGTA 59.231 43.478 0.00 0.00 38.11 2.74
792 798 2.568956 TGAGCCAGACTTTGCTATCAGT 59.431 45.455 0.00 0.00 38.11 3.41
835 854 3.315191 TCGATCACGTGCTCTATGATCAA 59.685 43.478 16.60 7.94 46.01 2.57
844 870 1.144969 TGGTTTTCGATCACGTGCTC 58.855 50.000 11.67 10.38 40.69 4.26
881 907 7.598278 TGGTTTATGATCACGTGCTAATTTTT 58.402 30.769 11.67 0.00 0.00 1.94
882 908 7.151999 TGGTTTATGATCACGTGCTAATTTT 57.848 32.000 11.67 0.00 0.00 1.82
883 909 6.751514 TGGTTTATGATCACGTGCTAATTT 57.248 33.333 11.67 0.00 0.00 1.82
884 910 6.374333 AGTTGGTTTATGATCACGTGCTAATT 59.626 34.615 11.67 0.00 0.00 1.40
885 911 5.880332 AGTTGGTTTATGATCACGTGCTAAT 59.120 36.000 11.67 1.95 0.00 1.73
886 912 5.242434 AGTTGGTTTATGATCACGTGCTAA 58.758 37.500 11.67 0.00 0.00 3.09
887 913 4.827692 AGTTGGTTTATGATCACGTGCTA 58.172 39.130 11.67 0.00 0.00 3.49
888 914 3.674997 AGTTGGTTTATGATCACGTGCT 58.325 40.909 11.67 0.00 0.00 4.40
889 915 5.734855 ATAGTTGGTTTATGATCACGTGC 57.265 39.130 11.67 0.00 0.00 5.34
890 916 9.692749 ACTATATAGTTGGTTTATGATCACGTG 57.307 33.333 9.94 9.94 31.13 4.49
896 922 9.624037 TGGGGTACTATATAGTTGGTTTATGAT 57.376 33.333 20.21 0.00 37.73 2.45
897 923 9.096823 CTGGGGTACTATATAGTTGGTTTATGA 57.903 37.037 20.21 0.00 37.73 2.15
898 924 8.877195 ACTGGGGTACTATATAGTTGGTTTATG 58.123 37.037 20.21 7.54 37.73 1.90
900 926 9.592196 CTACTGGGGTACTATATAGTTGGTTTA 57.408 37.037 20.21 0.00 37.73 2.01
901 927 8.069979 ACTACTGGGGTACTATATAGTTGGTTT 58.930 37.037 20.21 3.23 37.73 3.27
902 928 7.599170 ACTACTGGGGTACTATATAGTTGGTT 58.401 38.462 20.21 0.00 37.73 3.67
903 929 7.171822 ACTACTGGGGTACTATATAGTTGGT 57.828 40.000 20.21 6.24 37.73 3.67
904 930 8.389366 AGTACTACTGGGGTACTATATAGTTGG 58.611 40.741 20.21 5.64 45.22 3.77
905 931 9.228949 CAGTACTACTGGGGTACTATATAGTTG 57.771 40.741 20.21 4.20 45.27 3.16
945 980 1.670811 GGTGACCACTGATAAATGGCG 59.329 52.381 0.00 0.00 39.84 5.69
1225 1279 2.202623 CGGGAAAGCCTCGTCGAG 60.203 66.667 15.53 15.53 0.00 4.04
1896 1963 3.428452 CGGACGACCAGAAGCACTATTTA 60.428 47.826 4.48 0.00 35.59 1.40
1985 2052 5.715070 TCCGCGGTGATTTTGAAATAAATT 58.285 33.333 27.15 0.00 0.00 1.82
2097 2164 4.394729 GTGTAAGAACCAGGGATCAAACA 58.605 43.478 0.00 0.00 0.00 2.83
2101 2168 2.915869 AGGTGTAAGAACCAGGGATCA 58.084 47.619 0.00 0.00 43.20 2.92
2114 2181 1.066303 CTGCGTGGCAAAAAGGTGTAA 59.934 47.619 0.00 0.00 38.41 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.