Multiple sequence alignment - TraesCS2A01G217700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G217700 chr2A 100.000 3497 0 0 1 3497 204928827 204932323 0.000000e+00 6458.0
1 TraesCS2A01G217700 chr2A 79.339 121 16 7 1306 1421 204993376 204993492 3.740000e-10 76.8
2 TraesCS2A01G217700 chr2D 95.610 2073 74 11 423 2494 190369046 190371102 0.000000e+00 3308.0
3 TraesCS2A01G217700 chr2D 87.777 949 73 22 2517 3426 190433622 190434566 0.000000e+00 1070.0
4 TraesCS2A01G217700 chr2D 79.167 120 17 6 1306 1421 190437363 190437478 3.740000e-10 76.8
5 TraesCS2A01G217700 chr2B 93.610 1737 92 13 918 2653 247517579 247519297 0.000000e+00 2575.0
6 TraesCS2A01G217700 chr2B 92.464 491 20 5 436 920 247516843 247517322 0.000000e+00 686.0
7 TraesCS2A01G217700 chr2B 83.763 776 70 22 2689 3426 247519625 247520382 0.000000e+00 684.0
8 TraesCS2A01G217700 chr5D 85.577 104 12 3 1284 1385 350676185 350676287 4.770000e-19 106.0
9 TraesCS2A01G217700 chr5D 85.333 75 9 2 1307 1380 505818469 505818396 3.740000e-10 76.8
10 TraesCS2A01G217700 chr5B 85.577 104 12 3 1284 1385 411621830 411621932 4.770000e-19 106.0
11 TraesCS2A01G217700 chr5B 85.333 75 9 2 1307 1380 635808601 635808528 3.740000e-10 76.8
12 TraesCS2A01G217700 chr5A 85.577 104 12 3 1284 1385 451138355 451138457 4.770000e-19 106.0
13 TraesCS2A01G217700 chr1D 87.500 64 4 1 3432 3495 174804366 174804425 1.740000e-08 71.3
14 TraesCS2A01G217700 chr1D 87.500 64 4 1 3432 3495 174806301 174806360 1.740000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G217700 chr2A 204928827 204932323 3496 False 6458.0 6458 100.000000 1 3497 1 chr2A.!!$F1 3496
1 TraesCS2A01G217700 chr2D 190369046 190371102 2056 False 3308.0 3308 95.610000 423 2494 1 chr2D.!!$F1 2071
2 TraesCS2A01G217700 chr2D 190433622 190437478 3856 False 573.4 1070 83.472000 1306 3426 2 chr2D.!!$F2 2120
3 TraesCS2A01G217700 chr2B 247516843 247520382 3539 False 1315.0 2575 89.945667 436 3426 3 chr2B.!!$F1 2990

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.036765 TGACAATCTACGGGCACACC 60.037 55.0 0.00 0.0 0.0 4.16 F
594 595 0.039074 CTCAACGCGGTTCTCTCACT 60.039 55.0 12.47 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1922 2188 3.585990 CGCGTTGGGATGGATGGC 61.586 66.667 0.0 0.0 0.0 4.40 R
2514 2781 0.485099 ATCTGGCTAGGTCGGAGGAT 59.515 55.000 0.0 0.0 0.0 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.525619 TGACAATCTACGGGCACAC 57.474 52.632 0.00 0.00 0.00 3.82
19 20 0.036765 TGACAATCTACGGGCACACC 60.037 55.000 0.00 0.00 0.00 4.16
20 21 0.249398 GACAATCTACGGGCACACCT 59.751 55.000 0.00 0.00 36.97 4.00
21 22 0.249398 ACAATCTACGGGCACACCTC 59.751 55.000 0.00 0.00 36.97 3.85
22 23 0.806102 CAATCTACGGGCACACCTCG 60.806 60.000 0.00 0.00 36.97 4.63
23 24 1.956629 AATCTACGGGCACACCTCGG 61.957 60.000 0.00 0.00 36.97 4.63
24 25 4.143333 CTACGGGCACACCTCGGG 62.143 72.222 0.00 0.00 36.97 5.14
55 56 0.966179 AAAAATGCCGACCAGAACCC 59.034 50.000 0.00 0.00 0.00 4.11
56 57 0.178975 AAAATGCCGACCAGAACCCA 60.179 50.000 0.00 0.00 0.00 4.51
57 58 0.039618 AAATGCCGACCAGAACCCAT 59.960 50.000 0.00 0.00 0.00 4.00
58 59 0.394352 AATGCCGACCAGAACCCATC 60.394 55.000 0.00 0.00 0.00 3.51
59 60 1.274703 ATGCCGACCAGAACCCATCT 61.275 55.000 0.00 0.00 39.68 2.90
60 61 1.153349 GCCGACCAGAACCCATCTC 60.153 63.158 0.00 0.00 35.73 2.75
61 62 1.522569 CCGACCAGAACCCATCTCC 59.477 63.158 0.00 0.00 35.73 3.71
62 63 1.141881 CGACCAGAACCCATCTCCG 59.858 63.158 0.00 0.00 35.73 4.63
63 64 1.320344 CGACCAGAACCCATCTCCGA 61.320 60.000 0.00 0.00 35.73 4.55
64 65 0.461961 GACCAGAACCCATCTCCGAG 59.538 60.000 0.00 0.00 35.73 4.63
65 66 1.144936 CCAGAACCCATCTCCGAGC 59.855 63.158 0.00 0.00 35.73 5.03
66 67 1.227089 CAGAACCCATCTCCGAGCG 60.227 63.158 0.00 0.00 35.73 5.03
67 68 1.379977 AGAACCCATCTCCGAGCGA 60.380 57.895 0.00 0.00 30.46 4.93
68 69 0.757188 AGAACCCATCTCCGAGCGAT 60.757 55.000 0.00 0.00 30.46 4.58
69 70 0.319125 GAACCCATCTCCGAGCGATC 60.319 60.000 0.00 0.00 0.00 3.69
70 71 1.749334 AACCCATCTCCGAGCGATCC 61.749 60.000 0.00 0.00 0.00 3.36
71 72 1.905843 CCCATCTCCGAGCGATCCT 60.906 63.158 0.00 0.00 0.00 3.24
72 73 1.467678 CCCATCTCCGAGCGATCCTT 61.468 60.000 0.00 0.00 0.00 3.36
73 74 1.248486 CCATCTCCGAGCGATCCTTA 58.752 55.000 0.00 0.00 0.00 2.69
74 75 1.201181 CCATCTCCGAGCGATCCTTAG 59.799 57.143 0.00 0.00 0.00 2.18
75 76 1.201181 CATCTCCGAGCGATCCTTAGG 59.799 57.143 0.00 0.00 0.00 2.69
76 77 0.472898 TCTCCGAGCGATCCTTAGGA 59.527 55.000 2.37 2.37 35.55 2.94
77 78 0.594110 CTCCGAGCGATCCTTAGGAC 59.406 60.000 1.74 0.00 32.98 3.85
78 79 0.106868 TCCGAGCGATCCTTAGGACA 60.107 55.000 1.74 0.00 32.98 4.02
79 80 0.962489 CCGAGCGATCCTTAGGACAT 59.038 55.000 1.74 0.00 32.98 3.06
80 81 1.336332 CCGAGCGATCCTTAGGACATG 60.336 57.143 1.74 0.00 32.98 3.21
81 82 1.609072 CGAGCGATCCTTAGGACATGA 59.391 52.381 1.74 0.00 32.98 3.07
82 83 2.605823 CGAGCGATCCTTAGGACATGAC 60.606 54.545 1.74 0.00 32.98 3.06
83 84 1.338337 AGCGATCCTTAGGACATGACG 59.662 52.381 1.74 6.23 32.98 4.35
84 85 1.337071 GCGATCCTTAGGACATGACGA 59.663 52.381 1.74 0.00 32.98 4.20
85 86 2.859032 GCGATCCTTAGGACATGACGAC 60.859 54.545 1.74 0.00 32.98 4.34
86 87 2.357952 CGATCCTTAGGACATGACGACA 59.642 50.000 1.74 0.00 32.98 4.35
87 88 3.707793 GATCCTTAGGACATGACGACAC 58.292 50.000 1.74 0.00 32.98 3.67
88 89 1.822990 TCCTTAGGACATGACGACACC 59.177 52.381 0.00 0.00 0.00 4.16
89 90 1.825474 CCTTAGGACATGACGACACCT 59.175 52.381 0.00 0.00 35.11 4.00
90 91 3.021695 CCTTAGGACATGACGACACCTA 58.978 50.000 0.00 0.00 32.90 3.08
91 92 3.181489 CCTTAGGACATGACGACACCTAC 60.181 52.174 0.00 0.00 33.71 3.18
92 93 2.217510 AGGACATGACGACACCTACT 57.782 50.000 0.00 0.00 0.00 2.57
93 94 2.093106 AGGACATGACGACACCTACTC 58.907 52.381 0.00 0.00 0.00 2.59
94 95 2.093106 GGACATGACGACACCTACTCT 58.907 52.381 0.00 0.00 0.00 3.24
95 96 2.492484 GGACATGACGACACCTACTCTT 59.508 50.000 0.00 0.00 0.00 2.85
96 97 3.693085 GGACATGACGACACCTACTCTTA 59.307 47.826 0.00 0.00 0.00 2.10
97 98 4.438472 GGACATGACGACACCTACTCTTAC 60.438 50.000 0.00 0.00 0.00 2.34
98 99 3.442977 ACATGACGACACCTACTCTTACC 59.557 47.826 0.00 0.00 0.00 2.85
99 100 2.440409 TGACGACACCTACTCTTACCC 58.560 52.381 0.00 0.00 0.00 3.69
100 101 1.399791 GACGACACCTACTCTTACCCG 59.600 57.143 0.00 0.00 0.00 5.28
101 102 0.737219 CGACACCTACTCTTACCCGG 59.263 60.000 0.00 0.00 0.00 5.73
102 103 1.679944 CGACACCTACTCTTACCCGGA 60.680 57.143 0.73 0.00 0.00 5.14
103 104 2.450476 GACACCTACTCTTACCCGGAA 58.550 52.381 0.73 0.00 0.00 4.30
104 105 2.827921 GACACCTACTCTTACCCGGAAA 59.172 50.000 0.73 0.00 0.00 3.13
105 106 2.564504 ACACCTACTCTTACCCGGAAAC 59.435 50.000 0.73 0.00 0.00 2.78
132 133 2.686235 GCAATGGCAAAGCATAACACA 58.314 42.857 9.31 0.00 40.72 3.72
133 134 2.412770 GCAATGGCAAAGCATAACACAC 59.587 45.455 9.31 0.00 40.72 3.82
134 135 3.861886 GCAATGGCAAAGCATAACACACT 60.862 43.478 9.31 0.00 40.72 3.55
135 136 4.617995 GCAATGGCAAAGCATAACACACTA 60.618 41.667 9.31 0.00 40.72 2.74
136 137 4.701956 ATGGCAAAGCATAACACACTAC 57.298 40.909 0.00 0.00 0.00 2.73
137 138 3.481453 TGGCAAAGCATAACACACTACA 58.519 40.909 0.00 0.00 0.00 2.74
138 139 3.252215 TGGCAAAGCATAACACACTACAC 59.748 43.478 0.00 0.00 0.00 2.90
139 140 3.252215 GGCAAAGCATAACACACTACACA 59.748 43.478 0.00 0.00 0.00 3.72
140 141 4.261405 GGCAAAGCATAACACACTACACAA 60.261 41.667 0.00 0.00 0.00 3.33
141 142 5.277825 GCAAAGCATAACACACTACACAAA 58.722 37.500 0.00 0.00 0.00 2.83
142 143 5.399301 GCAAAGCATAACACACTACACAAAG 59.601 40.000 0.00 0.00 0.00 2.77
143 144 5.689383 AAGCATAACACACTACACAAAGG 57.311 39.130 0.00 0.00 0.00 3.11
144 145 4.072131 AGCATAACACACTACACAAAGGG 58.928 43.478 0.00 0.00 0.00 3.95
145 146 3.365969 GCATAACACACTACACAAAGGGC 60.366 47.826 0.00 0.00 0.00 5.19
146 147 1.687563 AACACACTACACAAAGGGCC 58.312 50.000 0.00 0.00 0.00 5.80
147 148 0.179001 ACACACTACACAAAGGGCCC 60.179 55.000 16.46 16.46 0.00 5.80
148 149 0.893727 CACACTACACAAAGGGCCCC 60.894 60.000 21.43 0.00 0.00 5.80
149 150 1.357272 ACACTACACAAAGGGCCCCA 61.357 55.000 21.43 0.00 0.00 4.96
150 151 0.893727 CACTACACAAAGGGCCCCAC 60.894 60.000 21.43 0.00 0.00 4.61
151 152 1.357272 ACTACACAAAGGGCCCCACA 61.357 55.000 21.43 0.00 0.00 4.17
152 153 0.178975 CTACACAAAGGGCCCCACAA 60.179 55.000 21.43 0.00 0.00 3.33
153 154 0.178975 TACACAAAGGGCCCCACAAG 60.179 55.000 21.43 9.08 0.00 3.16
154 155 2.524148 ACAAAGGGCCCCACAAGC 60.524 61.111 21.43 0.00 0.00 4.01
155 156 2.523902 CAAAGGGCCCCACAAGCA 60.524 61.111 21.43 0.00 0.00 3.91
156 157 1.914764 CAAAGGGCCCCACAAGCAT 60.915 57.895 21.43 0.00 0.00 3.79
157 158 1.610379 AAAGGGCCCCACAAGCATC 60.610 57.895 21.43 0.00 0.00 3.91
158 159 2.384933 AAAGGGCCCCACAAGCATCA 62.385 55.000 21.43 0.00 0.00 3.07
159 160 2.757099 GGGCCCCACAAGCATCAG 60.757 66.667 12.23 0.00 0.00 2.90
160 161 3.455469 GGCCCCACAAGCATCAGC 61.455 66.667 0.00 0.00 42.56 4.26
170 171 3.728474 GCATCAGCGATCCACAGG 58.272 61.111 0.00 0.00 0.00 4.00
171 172 1.153289 GCATCAGCGATCCACAGGT 60.153 57.895 0.00 0.00 0.00 4.00
172 173 1.156645 GCATCAGCGATCCACAGGTC 61.157 60.000 0.00 0.00 0.00 3.85
173 174 0.176449 CATCAGCGATCCACAGGTCA 59.824 55.000 0.00 0.00 0.00 4.02
174 175 1.126488 ATCAGCGATCCACAGGTCAT 58.874 50.000 0.00 0.00 0.00 3.06
175 176 1.775385 TCAGCGATCCACAGGTCATA 58.225 50.000 0.00 0.00 0.00 2.15
176 177 1.683385 TCAGCGATCCACAGGTCATAG 59.317 52.381 0.00 0.00 0.00 2.23
177 178 1.683385 CAGCGATCCACAGGTCATAGA 59.317 52.381 0.00 0.00 0.00 1.98
178 179 2.298446 CAGCGATCCACAGGTCATAGAT 59.702 50.000 0.00 0.00 0.00 1.98
179 180 2.560542 AGCGATCCACAGGTCATAGATC 59.439 50.000 0.00 0.00 0.00 2.75
180 181 2.353208 GCGATCCACAGGTCATAGATCC 60.353 54.545 0.00 0.00 31.61 3.36
181 182 2.232452 CGATCCACAGGTCATAGATCCC 59.768 54.545 0.00 0.00 31.61 3.85
182 183 2.103153 TCCACAGGTCATAGATCCCC 57.897 55.000 0.00 0.00 0.00 4.81
183 184 1.293763 TCCACAGGTCATAGATCCCCA 59.706 52.381 0.00 0.00 0.00 4.96
184 185 1.696336 CCACAGGTCATAGATCCCCAG 59.304 57.143 0.00 0.00 0.00 4.45
185 186 2.682594 CACAGGTCATAGATCCCCAGA 58.317 52.381 0.00 0.00 0.00 3.86
186 187 2.632028 CACAGGTCATAGATCCCCAGAG 59.368 54.545 0.00 0.00 0.00 3.35
187 188 1.622811 CAGGTCATAGATCCCCAGAGC 59.377 57.143 0.00 0.00 0.00 4.09
188 189 0.980423 GGTCATAGATCCCCAGAGCC 59.020 60.000 0.00 0.00 0.00 4.70
189 190 0.605589 GTCATAGATCCCCAGAGCCG 59.394 60.000 0.00 0.00 0.00 5.52
190 191 0.188587 TCATAGATCCCCAGAGCCGT 59.811 55.000 0.00 0.00 0.00 5.68
191 192 0.605589 CATAGATCCCCAGAGCCGTC 59.394 60.000 0.00 0.00 0.00 4.79
192 193 0.896019 ATAGATCCCCAGAGCCGTCG 60.896 60.000 0.00 0.00 0.00 5.12
193 194 2.280404 TAGATCCCCAGAGCCGTCGT 62.280 60.000 0.00 0.00 0.00 4.34
194 195 3.432051 GATCCCCAGAGCCGTCGTG 62.432 68.421 0.00 0.00 0.00 4.35
204 205 3.708734 CCGTCGTGGCGGTGAAAC 61.709 66.667 4.40 0.00 46.11 2.78
205 206 2.962786 CGTCGTGGCGGTGAAACA 60.963 61.111 0.00 0.00 39.98 2.83
206 207 2.629763 GTCGTGGCGGTGAAACAC 59.370 61.111 0.00 0.00 39.98 3.32
209 210 3.656045 GTGGCGGTGAAACACGGG 61.656 66.667 10.43 0.00 39.98 5.28
210 211 3.862991 TGGCGGTGAAACACGGGA 61.863 61.111 0.00 0.00 39.98 5.14
211 212 2.359478 GGCGGTGAAACACGGGAT 60.359 61.111 0.00 0.00 39.98 3.85
212 213 1.969589 GGCGGTGAAACACGGGATT 60.970 57.895 0.00 0.00 39.98 3.01
213 214 0.674269 GGCGGTGAAACACGGGATTA 60.674 55.000 0.00 0.00 39.98 1.75
214 215 0.445043 GCGGTGAAACACGGGATTAC 59.555 55.000 0.00 0.00 39.98 1.89
215 216 0.717224 CGGTGAAACACGGGATTACG 59.283 55.000 0.00 0.00 39.98 3.18
216 217 0.445043 GGTGAAACACGGGATTACGC 59.555 55.000 0.00 0.00 39.98 4.42
224 225 4.240049 GGGATTACGCGATCGGAC 57.760 61.111 15.93 0.00 40.69 4.79
225 226 1.361271 GGGATTACGCGATCGGACA 59.639 57.895 15.93 0.23 40.69 4.02
226 227 0.663568 GGGATTACGCGATCGGACAG 60.664 60.000 15.93 0.68 40.69 3.51
227 228 0.309922 GGATTACGCGATCGGACAGA 59.690 55.000 15.93 0.00 40.69 3.41
228 229 1.663445 GGATTACGCGATCGGACAGAG 60.663 57.143 15.93 0.00 40.69 3.35
229 230 0.311165 ATTACGCGATCGGACAGAGG 59.689 55.000 15.93 0.00 40.69 3.69
230 231 0.745486 TTACGCGATCGGACAGAGGA 60.745 55.000 15.93 0.00 40.69 3.71
231 232 1.158484 TACGCGATCGGACAGAGGAG 61.158 60.000 15.93 0.00 40.69 3.69
232 233 2.725008 GCGATCGGACAGAGGAGG 59.275 66.667 18.30 0.00 0.00 4.30
233 234 1.824329 GCGATCGGACAGAGGAGGA 60.824 63.158 18.30 0.00 0.00 3.71
234 235 1.791103 GCGATCGGACAGAGGAGGAG 61.791 65.000 18.30 0.00 0.00 3.69
235 236 1.169661 CGATCGGACAGAGGAGGAGG 61.170 65.000 7.38 0.00 0.00 4.30
236 237 0.825840 GATCGGACAGAGGAGGAGGG 60.826 65.000 0.00 0.00 0.00 4.30
237 238 2.937959 ATCGGACAGAGGAGGAGGGC 62.938 65.000 0.00 0.00 0.00 5.19
238 239 3.151022 GGACAGAGGAGGAGGGCG 61.151 72.222 0.00 0.00 0.00 6.13
239 240 3.844090 GACAGAGGAGGAGGGCGC 61.844 72.222 0.00 0.00 0.00 6.53
274 275 3.717899 GCAATGCGGCTGTATCGA 58.282 55.556 0.00 0.00 0.00 3.59
275 276 2.013807 GCAATGCGGCTGTATCGAA 58.986 52.632 0.00 0.00 0.00 3.71
276 277 0.588252 GCAATGCGGCTGTATCGAAT 59.412 50.000 0.00 0.00 0.00 3.34
277 278 1.661178 GCAATGCGGCTGTATCGAATG 60.661 52.381 0.00 0.00 0.00 2.67
278 279 1.069703 CAATGCGGCTGTATCGAATGG 60.070 52.381 0.00 0.00 0.00 3.16
279 280 1.230635 ATGCGGCTGTATCGAATGGC 61.231 55.000 0.00 0.00 0.00 4.40
280 281 3.234390 CGGCTGTATCGAATGGCG 58.766 61.111 10.52 10.52 41.56 5.69
281 282 2.939022 GGCTGTATCGAATGGCGC 59.061 61.111 0.00 0.00 40.61 6.53
282 283 2.546321 GCTGTATCGAATGGCGCG 59.454 61.111 0.00 0.00 40.61 6.86
283 284 2.943345 GCTGTATCGAATGGCGCGG 61.943 63.158 8.83 0.00 40.61 6.46
284 285 1.299850 CTGTATCGAATGGCGCGGA 60.300 57.895 8.83 0.00 40.61 5.54
285 286 1.278172 CTGTATCGAATGGCGCGGAG 61.278 60.000 8.83 0.00 40.61 4.63
306 307 4.509737 GCCCGAGGAGGTGCGTAC 62.510 72.222 0.00 0.00 38.74 3.67
307 308 2.754658 CCCGAGGAGGTGCGTACT 60.755 66.667 3.01 0.00 38.74 2.73
308 309 2.772691 CCCGAGGAGGTGCGTACTC 61.773 68.421 3.01 0.00 38.74 2.59
315 316 2.450609 GAGGTGCGTACTCCTGAAAA 57.549 50.000 3.01 0.00 39.91 2.29
316 317 2.762745 GAGGTGCGTACTCCTGAAAAA 58.237 47.619 3.01 0.00 39.91 1.94
317 318 2.737252 GAGGTGCGTACTCCTGAAAAAG 59.263 50.000 3.01 0.00 39.91 2.27
318 319 2.104281 AGGTGCGTACTCCTGAAAAAGT 59.896 45.455 3.01 0.00 38.37 2.66
319 320 2.479275 GGTGCGTACTCCTGAAAAAGTC 59.521 50.000 3.01 0.00 0.00 3.01
320 321 3.391049 GTGCGTACTCCTGAAAAAGTCT 58.609 45.455 0.00 0.00 0.00 3.24
321 322 3.184581 GTGCGTACTCCTGAAAAAGTCTG 59.815 47.826 0.00 0.00 0.00 3.51
322 323 3.069016 TGCGTACTCCTGAAAAAGTCTGA 59.931 43.478 0.00 0.00 0.00 3.27
323 324 3.675698 GCGTACTCCTGAAAAAGTCTGAG 59.324 47.826 0.00 0.00 34.11 3.35
324 325 4.238514 CGTACTCCTGAAAAAGTCTGAGG 58.761 47.826 0.00 0.00 32.94 3.86
325 326 4.022242 CGTACTCCTGAAAAAGTCTGAGGA 60.022 45.833 0.00 0.00 32.94 3.71
326 327 5.336849 CGTACTCCTGAAAAAGTCTGAGGAT 60.337 44.000 0.00 0.00 30.11 3.24
327 328 5.159273 ACTCCTGAAAAAGTCTGAGGATC 57.841 43.478 0.00 0.00 30.11 3.36
328 329 4.019771 ACTCCTGAAAAAGTCTGAGGATCC 60.020 45.833 2.48 2.48 30.11 3.36
329 330 4.171234 TCCTGAAAAAGTCTGAGGATCCT 58.829 43.478 16.13 16.13 0.00 3.24
330 331 4.019860 TCCTGAAAAAGTCTGAGGATCCTG 60.020 45.833 22.02 5.77 0.00 3.86
331 332 4.019860 CCTGAAAAAGTCTGAGGATCCTGA 60.020 45.833 22.02 10.64 0.00 3.86
332 333 5.513788 CCTGAAAAAGTCTGAGGATCCTGAA 60.514 44.000 22.02 6.25 0.00 3.02
333 334 5.940617 TGAAAAAGTCTGAGGATCCTGAAA 58.059 37.500 22.02 0.00 0.00 2.69
334 335 6.364701 TGAAAAAGTCTGAGGATCCTGAAAA 58.635 36.000 22.02 0.00 0.00 2.29
335 336 6.833416 TGAAAAAGTCTGAGGATCCTGAAAAA 59.167 34.615 22.02 0.00 0.00 1.94
336 337 6.890979 AAAAGTCTGAGGATCCTGAAAAAG 57.109 37.500 22.02 8.69 0.00 2.27
337 338 5.574970 AAGTCTGAGGATCCTGAAAAAGT 57.425 39.130 22.02 0.00 0.00 2.66
338 339 5.574970 AGTCTGAGGATCCTGAAAAAGTT 57.425 39.130 22.02 0.00 0.00 2.66
339 340 5.946486 AGTCTGAGGATCCTGAAAAAGTTT 58.054 37.500 22.02 0.00 0.00 2.66
340 341 7.079451 AGTCTGAGGATCCTGAAAAAGTTTA 57.921 36.000 22.02 0.00 0.00 2.01
341 342 7.518188 AGTCTGAGGATCCTGAAAAAGTTTAA 58.482 34.615 22.02 0.00 0.00 1.52
342 343 7.663493 AGTCTGAGGATCCTGAAAAAGTTTAAG 59.337 37.037 22.02 0.00 0.00 1.85
343 344 7.445707 GTCTGAGGATCCTGAAAAAGTTTAAGT 59.554 37.037 22.02 0.00 0.00 2.24
344 345 7.445402 TCTGAGGATCCTGAAAAAGTTTAAGTG 59.555 37.037 22.02 0.00 0.00 3.16
345 346 7.287061 TGAGGATCCTGAAAAAGTTTAAGTGA 58.713 34.615 22.02 0.00 0.00 3.41
346 347 7.228706 TGAGGATCCTGAAAAAGTTTAAGTGAC 59.771 37.037 22.02 0.00 0.00 3.67
347 348 7.060421 AGGATCCTGAAAAAGTTTAAGTGACA 58.940 34.615 15.29 0.00 0.00 3.58
348 349 7.725844 AGGATCCTGAAAAAGTTTAAGTGACAT 59.274 33.333 15.29 0.00 0.00 3.06
349 350 7.809806 GGATCCTGAAAAAGTTTAAGTGACATG 59.190 37.037 3.84 0.00 0.00 3.21
350 351 7.639113 TCCTGAAAAAGTTTAAGTGACATGT 57.361 32.000 0.00 0.00 0.00 3.21
351 352 7.479980 TCCTGAAAAAGTTTAAGTGACATGTG 58.520 34.615 1.15 0.00 0.00 3.21
352 353 7.122055 TCCTGAAAAAGTTTAAGTGACATGTGT 59.878 33.333 1.15 0.00 0.00 3.72
353 354 7.759433 CCTGAAAAAGTTTAAGTGACATGTGTT 59.241 33.333 1.15 0.00 0.00 3.32
354 355 8.459521 TGAAAAAGTTTAAGTGACATGTGTTG 57.540 30.769 1.15 0.00 0.00 3.33
355 356 8.085296 TGAAAAAGTTTAAGTGACATGTGTTGT 58.915 29.630 1.15 0.00 42.79 3.32
356 357 8.825667 AAAAAGTTTAAGTGACATGTGTTGTT 57.174 26.923 1.15 0.00 39.18 2.83
357 358 8.825667 AAAAGTTTAAGTGACATGTGTTGTTT 57.174 26.923 1.15 0.00 39.18 2.83
358 359 8.460831 AAAGTTTAAGTGACATGTGTTGTTTC 57.539 30.769 1.15 0.00 39.18 2.78
359 360 7.391148 AGTTTAAGTGACATGTGTTGTTTCT 57.609 32.000 1.15 0.00 39.18 2.52
360 361 7.250569 AGTTTAAGTGACATGTGTTGTTTCTG 58.749 34.615 1.15 0.00 39.18 3.02
361 362 4.637483 AAGTGACATGTGTTGTTTCTGG 57.363 40.909 1.15 0.00 39.18 3.86
362 363 3.620488 AGTGACATGTGTTGTTTCTGGT 58.380 40.909 1.15 0.00 39.18 4.00
363 364 4.016444 AGTGACATGTGTTGTTTCTGGTT 58.984 39.130 1.15 0.00 39.18 3.67
364 365 4.104776 GTGACATGTGTTGTTTCTGGTTG 58.895 43.478 1.15 0.00 39.18 3.77
365 366 3.130164 TGACATGTGTTGTTTCTGGTTGG 59.870 43.478 1.15 0.00 39.18 3.77
366 367 3.096092 ACATGTGTTGTTTCTGGTTGGT 58.904 40.909 0.00 0.00 33.74 3.67
367 368 3.513515 ACATGTGTTGTTTCTGGTTGGTT 59.486 39.130 0.00 0.00 33.74 3.67
368 369 3.859411 TGTGTTGTTTCTGGTTGGTTC 57.141 42.857 0.00 0.00 0.00 3.62
369 370 2.162608 TGTGTTGTTTCTGGTTGGTTCG 59.837 45.455 0.00 0.00 0.00 3.95
370 371 2.420722 GTGTTGTTTCTGGTTGGTTCGA 59.579 45.455 0.00 0.00 0.00 3.71
371 372 3.066203 GTGTTGTTTCTGGTTGGTTCGAT 59.934 43.478 0.00 0.00 0.00 3.59
372 373 3.066064 TGTTGTTTCTGGTTGGTTCGATG 59.934 43.478 0.00 0.00 0.00 3.84
373 374 2.226330 TGTTTCTGGTTGGTTCGATGG 58.774 47.619 0.00 0.00 0.00 3.51
374 375 2.158740 TGTTTCTGGTTGGTTCGATGGA 60.159 45.455 0.00 0.00 0.00 3.41
375 376 3.081804 GTTTCTGGTTGGTTCGATGGAT 58.918 45.455 0.00 0.00 0.00 3.41
376 377 4.258543 GTTTCTGGTTGGTTCGATGGATA 58.741 43.478 0.00 0.00 0.00 2.59
377 378 4.561500 TTCTGGTTGGTTCGATGGATAA 57.438 40.909 0.00 0.00 0.00 1.75
378 379 3.869065 TCTGGTTGGTTCGATGGATAAC 58.131 45.455 0.00 0.00 0.00 1.89
379 380 2.607635 CTGGTTGGTTCGATGGATAACG 59.392 50.000 0.00 0.00 0.00 3.18
380 381 1.937899 GGTTGGTTCGATGGATAACGG 59.062 52.381 0.00 0.00 0.00 4.44
381 382 1.937899 GTTGGTTCGATGGATAACGGG 59.062 52.381 0.00 0.00 0.00 5.28
382 383 1.196911 TGGTTCGATGGATAACGGGT 58.803 50.000 0.00 0.00 0.00 5.28
383 384 1.137479 TGGTTCGATGGATAACGGGTC 59.863 52.381 0.00 0.00 0.00 4.46
384 385 1.137479 GGTTCGATGGATAACGGGTCA 59.863 52.381 0.00 0.00 0.00 4.02
385 386 2.199236 GTTCGATGGATAACGGGTCAC 58.801 52.381 0.00 0.00 0.00 3.67
395 396 3.027292 CGGGTCACGTTTGGGTTG 58.973 61.111 0.00 0.00 37.93 3.77
396 397 2.548295 CGGGTCACGTTTGGGTTGG 61.548 63.158 0.00 0.00 37.93 3.77
397 398 2.197605 GGGTCACGTTTGGGTTGGG 61.198 63.158 0.00 0.00 0.00 4.12
398 399 1.454295 GGTCACGTTTGGGTTGGGT 60.454 57.895 0.00 0.00 0.00 4.51
399 400 1.730451 GGTCACGTTTGGGTTGGGTG 61.730 60.000 0.00 0.00 0.00 4.61
400 401 1.033202 GTCACGTTTGGGTTGGGTGT 61.033 55.000 0.00 0.00 0.00 4.16
401 402 1.032657 TCACGTTTGGGTTGGGTGTG 61.033 55.000 0.00 0.00 0.00 3.82
402 403 2.415426 CGTTTGGGTTGGGTGTGC 59.585 61.111 0.00 0.00 0.00 4.57
403 404 2.418910 CGTTTGGGTTGGGTGTGCA 61.419 57.895 0.00 0.00 0.00 4.57
404 405 1.142965 GTTTGGGTTGGGTGTGCAC 59.857 57.895 10.75 10.75 0.00 4.57
405 406 1.305297 TTTGGGTTGGGTGTGCACA 60.305 52.632 17.42 17.42 0.00 4.57
406 407 0.689080 TTTGGGTTGGGTGTGCACAT 60.689 50.000 24.69 0.00 0.00 3.21
407 408 0.689080 TTGGGTTGGGTGTGCACATT 60.689 50.000 24.69 0.00 0.00 2.71
408 409 0.186143 TGGGTTGGGTGTGCACATTA 59.814 50.000 24.69 9.67 0.00 1.90
409 410 1.333177 GGGTTGGGTGTGCACATTAA 58.667 50.000 24.69 15.20 0.00 1.40
410 411 1.899142 GGGTTGGGTGTGCACATTAAT 59.101 47.619 24.69 0.00 0.00 1.40
411 412 3.093057 GGGTTGGGTGTGCACATTAATA 58.907 45.455 24.69 5.49 0.00 0.98
412 413 3.704061 GGGTTGGGTGTGCACATTAATAT 59.296 43.478 24.69 0.00 0.00 1.28
413 414 4.441356 GGGTTGGGTGTGCACATTAATATG 60.441 45.833 24.69 0.00 37.79 1.78
414 415 4.441356 GGTTGGGTGTGCACATTAATATGG 60.441 45.833 24.69 0.00 36.01 2.74
415 416 3.974719 TGGGTGTGCACATTAATATGGT 58.025 40.909 24.69 0.00 36.01 3.55
416 417 4.348486 TGGGTGTGCACATTAATATGGTT 58.652 39.130 24.69 0.00 36.01 3.67
417 418 4.774726 TGGGTGTGCACATTAATATGGTTT 59.225 37.500 24.69 0.00 36.01 3.27
418 419 5.952347 TGGGTGTGCACATTAATATGGTTTA 59.048 36.000 24.69 0.00 36.01 2.01
419 420 6.096141 TGGGTGTGCACATTAATATGGTTTAG 59.904 38.462 24.69 0.00 36.01 1.85
420 421 6.460953 GGGTGTGCACATTAATATGGTTTAGG 60.461 42.308 24.69 0.00 36.01 2.69
421 422 6.320164 GGTGTGCACATTAATATGGTTTAGGA 59.680 38.462 24.69 0.00 36.01 2.94
462 463 7.813645 ACAACCGAAATATTTGAGTACCTTTC 58.186 34.615 5.17 0.00 0.00 2.62
463 464 7.446013 ACAACCGAAATATTTGAGTACCTTTCA 59.554 33.333 5.17 0.00 0.00 2.69
464 465 8.458843 CAACCGAAATATTTGAGTACCTTTCAT 58.541 33.333 5.17 0.00 0.00 2.57
541 542 6.535150 TCATTTTATCTCTGGTTGACGATGAC 59.465 38.462 0.00 0.00 0.00 3.06
543 544 0.109272 TCTCTGGTTGACGATGACGC 60.109 55.000 0.00 0.00 43.96 5.19
545 546 0.246360 TCTGGTTGACGATGACGCAT 59.754 50.000 0.00 0.00 43.96 4.73
548 549 0.521242 GGTTGACGATGACGCATTGC 60.521 55.000 0.00 0.00 43.96 3.56
555 556 0.804364 GATGACGCATTGCAACAGGA 59.196 50.000 0.00 0.00 0.00 3.86
560 561 1.269206 ACGCATTGCAACAGGAGTTTG 60.269 47.619 0.00 0.00 35.28 2.93
592 593 1.289066 CCTCAACGCGGTTCTCTCA 59.711 57.895 12.47 0.00 0.00 3.27
593 594 1.009389 CCTCAACGCGGTTCTCTCAC 61.009 60.000 12.47 0.00 0.00 3.51
594 595 0.039074 CTCAACGCGGTTCTCTCACT 60.039 55.000 12.47 0.00 0.00 3.41
595 596 0.387929 TCAACGCGGTTCTCTCACTT 59.612 50.000 12.47 0.00 0.00 3.16
596 597 1.610038 TCAACGCGGTTCTCTCACTTA 59.390 47.619 12.47 0.00 0.00 2.24
597 598 2.034939 TCAACGCGGTTCTCTCACTTAA 59.965 45.455 12.47 0.00 0.00 1.85
606 607 6.641723 GCGGTTCTCTCACTTAATTAGTATCC 59.358 42.308 0.00 0.00 34.56 2.59
784 785 1.069596 CAAACTTTGGCCTGCACCC 59.930 57.895 3.32 0.00 0.00 4.61
814 815 1.863454 CGTATGCATCACTCTCTTGGC 59.137 52.381 0.19 0.00 0.00 4.52
951 1217 2.752939 CGGCTCATCGCATGCACAA 61.753 57.895 19.57 2.32 41.67 3.33
973 1239 8.300286 CACAACACAGGATCTCTCGTATATAAT 58.700 37.037 0.00 0.00 0.00 1.28
981 1247 8.962679 AGGATCTCTCGTATATAATCCTGAAAC 58.037 37.037 9.63 0.00 41.05 2.78
989 1255 9.268268 TCGTATATAATCCTGAAACCATTTCAC 57.732 33.333 0.00 0.00 44.21 3.18
1015 1281 6.785191 ACATATTCCATTCTTGTTTACTGCG 58.215 36.000 0.00 0.00 0.00 5.18
1048 1314 2.772189 GAGACATCGTGTGCGCAC 59.228 61.111 33.11 33.11 41.97 5.34
1162 1428 4.530857 CCCGATGTCTCCGCCACC 62.531 72.222 0.00 0.00 0.00 4.61
1333 1599 2.683933 CCGCCACTGTCCTACCCT 60.684 66.667 0.00 0.00 0.00 4.34
1777 2043 3.357079 CAGGACGCCAACAGCACC 61.357 66.667 0.00 0.00 44.04 5.01
1904 2170 0.387929 GAACCTGACGGGCATATCGA 59.612 55.000 0.00 0.00 39.10 3.59
2191 2457 4.722700 ATGGTGCTGCCGGTGGAC 62.723 66.667 1.90 8.05 41.21 4.02
2209 2475 3.054434 TGGACAACTACATGATCTTGGGG 60.054 47.826 12.76 7.35 0.00 4.96
2374 2640 6.955963 CGCTCTGAAGACAAATGTACAAATAC 59.044 38.462 0.00 0.00 0.00 1.89
2394 2660 2.288763 ACGTGTGTACATGCATGTCTGA 60.289 45.455 34.54 16.11 41.97 3.27
2474 2741 5.978934 TCGGTTGAGTTCAGAAAGTAAAC 57.021 39.130 0.00 0.00 30.84 2.01
2517 2784 6.679327 AAATTTAGAACCTTCAGCGTATCC 57.321 37.500 0.00 0.00 0.00 2.59
2518 2785 5.615925 ATTTAGAACCTTCAGCGTATCCT 57.384 39.130 0.00 0.00 0.00 3.24
2552 2819 6.605119 CCAGATATTAATCCCACTCACCTTT 58.395 40.000 0.00 0.00 31.98 3.11
2575 2842 5.948992 ATGCCTCTTACAAAACAGAACTC 57.051 39.130 0.00 0.00 0.00 3.01
2577 2844 3.364068 GCCTCTTACAAAACAGAACTCGC 60.364 47.826 0.00 0.00 0.00 5.03
2578 2845 3.186613 CCTCTTACAAAACAGAACTCGCC 59.813 47.826 0.00 0.00 0.00 5.54
2658 2925 9.891828 GATACTAATCTCAGTCAGTAGTCAATG 57.108 37.037 0.00 0.00 0.00 2.82
2672 2939 6.595716 CAGTAGTCAATGGGGACTTTAGAAAG 59.404 42.308 0.72 0.37 45.59 2.62
2723 3298 9.237846 GTTTTCTCAACCATTTTAGCTATATGC 57.762 33.333 0.00 0.00 43.29 3.14
2742 3317 9.447040 CTATATGCAAGTCACATGATTTTCAAG 57.553 33.333 0.00 0.00 0.00 3.02
2755 3330 8.650490 ACATGATTTTCAAGTTTGGGTAAATCT 58.350 29.630 0.00 9.20 35.05 2.40
2764 3339 7.829211 TCAAGTTTGGGTAAATCTATTCTCTGG 59.171 37.037 0.00 0.00 0.00 3.86
2775 3350 2.044123 ATTCTCTGGCGGTTGATTCC 57.956 50.000 0.00 0.00 0.00 3.01
2828 3404 7.148641 TCTTGTGTTGTTTCACAGCTTTTTAA 58.851 30.769 0.00 0.00 46.66 1.52
2851 3428 1.879380 TGATTTTGACTTGCTCGGGTG 59.121 47.619 0.00 0.00 0.00 4.61
2855 3432 0.249868 TTGACTTGCTCGGGTGAGTG 60.250 55.000 0.00 0.00 44.48 3.51
2873 3450 8.029522 GGGTGAGTGAAATTTTCCTTAGAATTC 58.970 37.037 6.68 0.00 0.00 2.17
2903 3480 3.806949 TGCCCCTGTTTTGATAAGTCT 57.193 42.857 0.00 0.00 0.00 3.24
2975 3573 5.922544 AGCTTGTTACTCATTGCATGTTTTC 59.077 36.000 0.00 0.00 0.00 2.29
2978 3576 7.594758 GCTTGTTACTCATTGCATGTTTTCTTA 59.405 33.333 0.00 0.00 0.00 2.10
2985 3583 9.630098 ACTCATTGCATGTTTTCTTATTTGTAG 57.370 29.630 0.00 0.00 0.00 2.74
2992 3590 8.699749 GCATGTTTTCTTATTTGTAGGTGTTTC 58.300 33.333 0.00 0.00 0.00 2.78
3059 3657 4.283363 ACATTGGTATTTTTGCCATGCA 57.717 36.364 0.00 0.00 36.47 3.96
3060 3658 4.002316 ACATTGGTATTTTTGCCATGCAC 58.998 39.130 0.00 0.00 38.71 4.57
3075 3673 3.331150 CATGCACATTTTTGGCATCACT 58.669 40.909 0.00 0.00 45.81 3.41
3083 3681 6.308766 CACATTTTTGGCATCACTTTAGCTAC 59.691 38.462 0.00 0.00 0.00 3.58
3084 3682 5.385509 TTTTTGGCATCACTTTAGCTACC 57.614 39.130 0.00 0.00 0.00 3.18
3088 3690 2.939103 GGCATCACTTTAGCTACCAGTG 59.061 50.000 19.94 19.94 39.51 3.66
3112 3714 6.090783 GGCCTAAAAAGTTATTTTCGGACAG 58.909 40.000 0.00 0.00 37.65 3.51
3145 3752 6.908870 TCCGTTGATTTCTGTTATGAGATG 57.091 37.500 0.00 0.00 0.00 2.90
3147 3754 6.878923 TCCGTTGATTTCTGTTATGAGATGTT 59.121 34.615 0.00 0.00 0.00 2.71
3221 3829 8.887264 TTAATGACCACATATTTGGGTTAGTT 57.113 30.769 12.50 3.08 41.49 2.24
3236 3845 3.373130 GGTTAGTTAATTCCTGTGCGACC 59.627 47.826 0.00 0.00 0.00 4.79
3239 3848 3.482436 AGTTAATTCCTGTGCGACCAAA 58.518 40.909 0.00 0.00 0.00 3.28
3242 3851 0.893727 ATTCCTGTGCGACCAAACCC 60.894 55.000 0.00 0.00 0.00 4.11
3272 3881 2.288213 CCCCTTTGCTCTTTTCGGTTTC 60.288 50.000 0.00 0.00 0.00 2.78
3273 3882 2.360801 CCCTTTGCTCTTTTCGGTTTCA 59.639 45.455 0.00 0.00 0.00 2.69
3274 3883 3.550842 CCCTTTGCTCTTTTCGGTTTCAG 60.551 47.826 0.00 0.00 0.00 3.02
3275 3884 2.774439 TTGCTCTTTTCGGTTTCAGC 57.226 45.000 0.00 0.00 0.00 4.26
3279 3894 3.130340 TGCTCTTTTCGGTTTCAGCTTTT 59.870 39.130 0.00 0.00 0.00 2.27
3354 3971 8.774586 GGATGTTGGATGAGTGTAAATGTATAC 58.225 37.037 0.00 0.00 0.00 1.47
3433 4050 4.846779 TCTTTGGATACTTTGTTGTGGC 57.153 40.909 0.00 0.00 37.61 5.01
3434 4051 4.211125 TCTTTGGATACTTTGTTGTGGCA 58.789 39.130 0.00 0.00 37.61 4.92
3435 4052 4.832266 TCTTTGGATACTTTGTTGTGGCAT 59.168 37.500 0.00 0.00 37.61 4.40
3436 4053 4.517952 TTGGATACTTTGTTGTGGCATG 57.482 40.909 0.00 0.00 37.61 4.06
3437 4054 2.230992 TGGATACTTTGTTGTGGCATGC 59.769 45.455 9.90 9.90 37.61 4.06
3438 4055 2.417243 GGATACTTTGTTGTGGCATGCC 60.417 50.000 30.54 30.54 0.00 4.40
3439 4056 0.965439 TACTTTGTTGTGGCATGCCC 59.035 50.000 33.44 23.83 34.56 5.36
3440 4057 0.760189 ACTTTGTTGTGGCATGCCCT 60.760 50.000 33.44 4.80 34.56 5.19
3442 4059 0.965439 TTTGTTGTGGCATGCCCTAC 59.035 50.000 33.44 27.10 34.56 3.18
3444 4061 2.045438 TTGTGGCATGCCCTACCG 60.045 61.111 33.44 0.00 34.56 4.02
3445 4062 4.794648 TGTGGCATGCCCTACCGC 62.795 66.667 33.44 15.32 34.56 5.68
3448 4065 2.753849 GGCATGCCCTACCGCAAA 60.754 61.111 27.24 0.00 43.24 3.68
3450 4067 0.821711 GGCATGCCCTACCGCAAATA 60.822 55.000 27.24 0.00 43.24 1.40
3453 4070 2.503331 CATGCCCTACCGCAAATATGA 58.497 47.619 0.00 0.00 43.24 2.15
3454 4071 1.961793 TGCCCTACCGCAAATATGAC 58.038 50.000 0.00 0.00 35.32 3.06
3455 4072 1.488812 TGCCCTACCGCAAATATGACT 59.511 47.619 0.00 0.00 35.32 3.41
3457 4074 3.244078 TGCCCTACCGCAAATATGACTAG 60.244 47.826 0.00 0.00 35.32 2.57
3458 4075 3.244112 GCCCTACCGCAAATATGACTAGT 60.244 47.826 0.00 0.00 0.00 2.57
3459 4076 4.021719 GCCCTACCGCAAATATGACTAGTA 60.022 45.833 0.00 0.00 0.00 1.82
3460 4077 5.467705 CCCTACCGCAAATATGACTAGTAC 58.532 45.833 0.00 0.00 0.00 2.73
3461 4078 5.010314 CCCTACCGCAAATATGACTAGTACA 59.990 44.000 0.00 0.00 0.00 2.90
3462 4079 5.919141 CCTACCGCAAATATGACTAGTACAC 59.081 44.000 0.00 0.00 0.00 2.90
3464 4081 6.704289 ACCGCAAATATGACTAGTACACTA 57.296 37.500 0.00 0.00 0.00 2.74
3476 4344 3.759815 AGTACACTAGGAGGTCATGGT 57.240 47.619 0.00 0.00 0.00 3.55
3477 4345 3.366396 AGTACACTAGGAGGTCATGGTG 58.634 50.000 6.59 6.59 43.25 4.17
3479 4347 2.461695 ACACTAGGAGGTCATGGTGAG 58.538 52.381 14.06 0.00 40.75 3.51
3482 4350 3.381908 CACTAGGAGGTCATGGTGAGTAC 59.618 52.174 2.29 0.00 40.75 2.73
3483 4351 1.475403 AGGAGGTCATGGTGAGTACG 58.525 55.000 0.00 0.00 0.00 3.67
3491 4359 1.068125 CATGGTGAGTACGTCGGTCAA 60.068 52.381 0.00 0.00 0.00 3.18
3493 4361 1.068125 TGGTGAGTACGTCGGTCAATG 60.068 52.381 0.00 0.00 0.00 2.82
3494 4362 1.200716 GGTGAGTACGTCGGTCAATGA 59.799 52.381 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.036765 GGTGTGCCCGTAGATTGTCA 60.037 55.000 0.00 0.00 0.00 3.58
1 2 0.249398 AGGTGTGCCCGTAGATTGTC 59.751 55.000 0.00 0.00 38.74 3.18
4 5 1.515954 CGAGGTGTGCCCGTAGATT 59.484 57.895 0.00 0.00 38.74 2.40
5 6 2.423898 CCGAGGTGTGCCCGTAGAT 61.424 63.158 0.00 0.00 38.74 1.98
6 7 3.066190 CCGAGGTGTGCCCGTAGA 61.066 66.667 0.00 0.00 38.74 2.59
7 8 4.143333 CCCGAGGTGTGCCCGTAG 62.143 72.222 0.00 0.00 38.74 3.51
22 23 2.522193 TTTTTGGGTCCGGTGCCC 60.522 61.111 23.84 23.84 46.26 5.36
36 37 0.966179 GGGTTCTGGTCGGCATTTTT 59.034 50.000 0.00 0.00 0.00 1.94
37 38 0.178975 TGGGTTCTGGTCGGCATTTT 60.179 50.000 0.00 0.00 0.00 1.82
38 39 0.039618 ATGGGTTCTGGTCGGCATTT 59.960 50.000 0.00 0.00 0.00 2.32
39 40 0.394352 GATGGGTTCTGGTCGGCATT 60.394 55.000 0.00 0.00 0.00 3.56
40 41 1.224592 GATGGGTTCTGGTCGGCAT 59.775 57.895 0.00 0.00 0.00 4.40
41 42 1.899437 GAGATGGGTTCTGGTCGGCA 61.899 60.000 0.00 0.00 33.74 5.69
42 43 1.153349 GAGATGGGTTCTGGTCGGC 60.153 63.158 0.00 0.00 33.74 5.54
43 44 1.522569 GGAGATGGGTTCTGGTCGG 59.477 63.158 0.00 0.00 33.74 4.79
44 45 1.141881 CGGAGATGGGTTCTGGTCG 59.858 63.158 0.00 0.00 33.74 4.79
45 46 0.461961 CTCGGAGATGGGTTCTGGTC 59.538 60.000 0.00 0.00 33.74 4.02
46 47 1.617947 GCTCGGAGATGGGTTCTGGT 61.618 60.000 9.69 0.00 33.74 4.00
47 48 1.144936 GCTCGGAGATGGGTTCTGG 59.855 63.158 9.69 0.00 33.74 3.86
48 49 1.227089 CGCTCGGAGATGGGTTCTG 60.227 63.158 9.69 0.00 33.74 3.02
49 50 0.757188 ATCGCTCGGAGATGGGTTCT 60.757 55.000 9.69 0.00 37.41 3.01
50 51 0.319125 GATCGCTCGGAGATGGGTTC 60.319 60.000 9.69 0.00 33.89 3.62
51 52 1.742768 GATCGCTCGGAGATGGGTT 59.257 57.895 9.69 0.00 33.89 4.11
52 53 2.203771 GGATCGCTCGGAGATGGGT 61.204 63.158 9.69 0.00 33.89 4.51
53 54 1.467678 AAGGATCGCTCGGAGATGGG 61.468 60.000 9.69 0.00 33.89 4.00
54 55 1.201181 CTAAGGATCGCTCGGAGATGG 59.799 57.143 9.69 0.00 33.89 3.51
55 56 1.201181 CCTAAGGATCGCTCGGAGATG 59.799 57.143 9.69 0.00 33.89 2.90
56 57 1.074084 TCCTAAGGATCGCTCGGAGAT 59.926 52.381 9.69 0.00 33.89 2.75
57 58 0.472898 TCCTAAGGATCGCTCGGAGA 59.527 55.000 9.69 0.00 0.00 3.71
58 59 0.594110 GTCCTAAGGATCGCTCGGAG 59.406 60.000 0.00 0.00 32.73 4.63
59 60 0.106868 TGTCCTAAGGATCGCTCGGA 60.107 55.000 0.00 0.00 32.73 4.55
60 61 0.962489 ATGTCCTAAGGATCGCTCGG 59.038 55.000 0.00 0.00 32.73 4.63
61 62 1.609072 TCATGTCCTAAGGATCGCTCG 59.391 52.381 0.00 0.00 32.73 5.03
62 63 2.605823 CGTCATGTCCTAAGGATCGCTC 60.606 54.545 0.00 0.00 32.73 5.03
63 64 1.338337 CGTCATGTCCTAAGGATCGCT 59.662 52.381 0.00 0.00 32.73 4.93
64 65 1.337071 TCGTCATGTCCTAAGGATCGC 59.663 52.381 0.00 0.00 32.73 4.58
65 66 2.357952 TGTCGTCATGTCCTAAGGATCG 59.642 50.000 0.00 0.00 32.73 3.69
66 67 3.491104 GGTGTCGTCATGTCCTAAGGATC 60.491 52.174 0.00 0.00 32.73 3.36
67 68 2.431057 GGTGTCGTCATGTCCTAAGGAT 59.569 50.000 0.00 0.00 32.73 3.24
68 69 1.822990 GGTGTCGTCATGTCCTAAGGA 59.177 52.381 0.00 0.00 0.00 3.36
69 70 1.825474 AGGTGTCGTCATGTCCTAAGG 59.175 52.381 0.00 0.00 0.00 2.69
70 71 3.695060 AGTAGGTGTCGTCATGTCCTAAG 59.305 47.826 0.00 0.00 33.41 2.18
71 72 3.693085 GAGTAGGTGTCGTCATGTCCTAA 59.307 47.826 0.00 0.00 33.41 2.69
72 73 3.054582 AGAGTAGGTGTCGTCATGTCCTA 60.055 47.826 0.00 0.00 0.00 2.94
73 74 2.093106 GAGTAGGTGTCGTCATGTCCT 58.907 52.381 0.00 0.00 0.00 3.85
74 75 2.093106 AGAGTAGGTGTCGTCATGTCC 58.907 52.381 0.00 0.00 0.00 4.02
75 76 3.851976 AAGAGTAGGTGTCGTCATGTC 57.148 47.619 0.00 0.00 0.00 3.06
76 77 3.442977 GGTAAGAGTAGGTGTCGTCATGT 59.557 47.826 0.00 0.00 0.00 3.21
77 78 3.181489 GGGTAAGAGTAGGTGTCGTCATG 60.181 52.174 0.00 0.00 0.00 3.07
78 79 3.022406 GGGTAAGAGTAGGTGTCGTCAT 58.978 50.000 0.00 0.00 0.00 3.06
79 80 2.440409 GGGTAAGAGTAGGTGTCGTCA 58.560 52.381 0.00 0.00 0.00 4.35
80 81 1.399791 CGGGTAAGAGTAGGTGTCGTC 59.600 57.143 0.00 0.00 0.00 4.20
81 82 1.457346 CGGGTAAGAGTAGGTGTCGT 58.543 55.000 0.00 0.00 0.00 4.34
82 83 0.737219 CCGGGTAAGAGTAGGTGTCG 59.263 60.000 0.00 0.00 0.00 4.35
83 84 2.134789 TCCGGGTAAGAGTAGGTGTC 57.865 55.000 0.00 0.00 0.00 3.67
84 85 2.564504 GTTTCCGGGTAAGAGTAGGTGT 59.435 50.000 0.00 0.00 0.00 4.16
85 86 2.416431 CGTTTCCGGGTAAGAGTAGGTG 60.416 54.545 0.00 0.00 0.00 4.00
86 87 1.821136 CGTTTCCGGGTAAGAGTAGGT 59.179 52.381 0.00 0.00 0.00 3.08
87 88 1.470458 GCGTTTCCGGGTAAGAGTAGG 60.470 57.143 0.00 0.00 33.68 3.18
88 89 1.203052 TGCGTTTCCGGGTAAGAGTAG 59.797 52.381 0.00 0.00 33.68 2.57
89 90 1.067635 GTGCGTTTCCGGGTAAGAGTA 60.068 52.381 0.00 0.00 33.68 2.59
90 91 0.320160 GTGCGTTTCCGGGTAAGAGT 60.320 55.000 0.00 0.00 33.68 3.24
91 92 0.320073 TGTGCGTTTCCGGGTAAGAG 60.320 55.000 0.00 0.00 33.68 2.85
92 93 0.322322 ATGTGCGTTTCCGGGTAAGA 59.678 50.000 0.00 0.00 33.68 2.10
93 94 0.446222 CATGTGCGTTTCCGGGTAAG 59.554 55.000 0.00 0.00 33.68 2.34
94 95 1.579084 GCATGTGCGTTTCCGGGTAA 61.579 55.000 0.00 0.00 33.68 2.85
95 96 2.036006 GCATGTGCGTTTCCGGGTA 61.036 57.895 0.00 0.00 33.68 3.69
96 97 3.361977 GCATGTGCGTTTCCGGGT 61.362 61.111 0.00 0.00 33.68 5.28
97 98 2.211619 ATTGCATGTGCGTTTCCGGG 62.212 55.000 0.00 0.00 45.83 5.73
98 99 1.072116 CATTGCATGTGCGTTTCCGG 61.072 55.000 0.00 0.00 45.83 5.14
99 100 1.072116 CCATTGCATGTGCGTTTCCG 61.072 55.000 0.01 0.00 45.83 4.30
100 101 1.353609 GCCATTGCATGTGCGTTTCC 61.354 55.000 0.01 0.00 45.83 3.13
101 102 0.666880 TGCCATTGCATGTGCGTTTC 60.667 50.000 0.01 0.00 44.23 2.78
102 103 1.366734 TGCCATTGCATGTGCGTTT 59.633 47.368 0.01 0.00 44.23 3.60
103 104 3.049470 TGCCATTGCATGTGCGTT 58.951 50.000 0.01 0.00 44.23 4.84
112 113 2.412770 GTGTGTTATGCTTTGCCATTGC 59.587 45.455 0.00 0.00 38.26 3.56
113 114 3.916761 AGTGTGTTATGCTTTGCCATTG 58.083 40.909 0.00 0.00 0.00 2.82
114 115 4.522405 TGTAGTGTGTTATGCTTTGCCATT 59.478 37.500 0.00 0.00 0.00 3.16
115 116 4.078537 TGTAGTGTGTTATGCTTTGCCAT 58.921 39.130 0.00 0.00 0.00 4.40
116 117 3.252215 GTGTAGTGTGTTATGCTTTGCCA 59.748 43.478 0.00 0.00 0.00 4.92
117 118 3.252215 TGTGTAGTGTGTTATGCTTTGCC 59.748 43.478 0.00 0.00 0.00 4.52
118 119 4.481930 TGTGTAGTGTGTTATGCTTTGC 57.518 40.909 0.00 0.00 0.00 3.68
119 120 5.914635 CCTTTGTGTAGTGTGTTATGCTTTG 59.085 40.000 0.00 0.00 0.00 2.77
120 121 5.009610 CCCTTTGTGTAGTGTGTTATGCTTT 59.990 40.000 0.00 0.00 0.00 3.51
121 122 4.518970 CCCTTTGTGTAGTGTGTTATGCTT 59.481 41.667 0.00 0.00 0.00 3.91
122 123 4.072131 CCCTTTGTGTAGTGTGTTATGCT 58.928 43.478 0.00 0.00 0.00 3.79
123 124 3.365969 GCCCTTTGTGTAGTGTGTTATGC 60.366 47.826 0.00 0.00 0.00 3.14
124 125 3.190535 GGCCCTTTGTGTAGTGTGTTATG 59.809 47.826 0.00 0.00 0.00 1.90
125 126 3.418047 GGCCCTTTGTGTAGTGTGTTAT 58.582 45.455 0.00 0.00 0.00 1.89
126 127 2.487625 GGGCCCTTTGTGTAGTGTGTTA 60.488 50.000 17.04 0.00 0.00 2.41
127 128 1.687563 GGCCCTTTGTGTAGTGTGTT 58.312 50.000 0.00 0.00 0.00 3.32
128 129 0.179001 GGGCCCTTTGTGTAGTGTGT 60.179 55.000 17.04 0.00 0.00 3.72
129 130 0.893727 GGGGCCCTTTGTGTAGTGTG 60.894 60.000 24.38 0.00 0.00 3.82
130 131 1.357272 TGGGGCCCTTTGTGTAGTGT 61.357 55.000 25.93 0.00 0.00 3.55
131 132 0.893727 GTGGGGCCCTTTGTGTAGTG 60.894 60.000 25.93 0.00 0.00 2.74
132 133 1.357272 TGTGGGGCCCTTTGTGTAGT 61.357 55.000 25.93 0.00 0.00 2.73
133 134 0.178975 TTGTGGGGCCCTTTGTGTAG 60.179 55.000 25.93 0.00 0.00 2.74
134 135 0.178975 CTTGTGGGGCCCTTTGTGTA 60.179 55.000 25.93 0.00 0.00 2.90
135 136 1.457455 CTTGTGGGGCCCTTTGTGT 60.457 57.895 25.93 0.00 0.00 3.72
136 137 2.871253 GCTTGTGGGGCCCTTTGTG 61.871 63.158 25.93 10.91 0.00 3.33
137 138 2.524148 GCTTGTGGGGCCCTTTGT 60.524 61.111 25.93 0.00 0.00 2.83
138 139 1.891722 GATGCTTGTGGGGCCCTTTG 61.892 60.000 25.93 12.27 0.00 2.77
139 140 1.610379 GATGCTTGTGGGGCCCTTT 60.610 57.895 25.93 0.00 0.00 3.11
140 141 2.037847 GATGCTTGTGGGGCCCTT 59.962 61.111 25.93 0.00 0.00 3.95
141 142 3.267233 TGATGCTTGTGGGGCCCT 61.267 61.111 25.93 0.00 0.00 5.19
142 143 2.757099 CTGATGCTTGTGGGGCCC 60.757 66.667 18.17 18.17 0.00 5.80
143 144 3.455469 GCTGATGCTTGTGGGGCC 61.455 66.667 0.00 0.00 36.03 5.80
144 145 3.818787 CGCTGATGCTTGTGGGGC 61.819 66.667 0.00 0.00 36.97 5.80
145 146 1.442526 GATCGCTGATGCTTGTGGGG 61.443 60.000 0.00 0.00 36.97 4.96
146 147 1.442526 GGATCGCTGATGCTTGTGGG 61.443 60.000 3.53 0.00 36.97 4.61
147 148 0.745486 TGGATCGCTGATGCTTGTGG 60.745 55.000 10.30 0.00 36.97 4.17
148 149 0.376152 GTGGATCGCTGATGCTTGTG 59.624 55.000 10.30 0.00 36.97 3.33
149 150 0.036105 TGTGGATCGCTGATGCTTGT 60.036 50.000 10.30 0.00 36.97 3.16
150 151 0.656259 CTGTGGATCGCTGATGCTTG 59.344 55.000 10.30 0.18 36.97 4.01
151 152 0.463295 CCTGTGGATCGCTGATGCTT 60.463 55.000 10.30 0.00 36.97 3.91
152 153 1.145598 CCTGTGGATCGCTGATGCT 59.854 57.895 10.30 0.00 36.97 3.79
153 154 1.153289 ACCTGTGGATCGCTGATGC 60.153 57.895 3.75 3.75 0.00 3.91
154 155 0.176449 TGACCTGTGGATCGCTGATG 59.824 55.000 0.00 0.00 0.00 3.07
155 156 1.126488 ATGACCTGTGGATCGCTGAT 58.874 50.000 0.00 0.00 0.00 2.90
156 157 1.683385 CTATGACCTGTGGATCGCTGA 59.317 52.381 0.00 0.00 0.00 4.26
157 158 1.683385 TCTATGACCTGTGGATCGCTG 59.317 52.381 0.00 0.00 0.00 5.18
158 159 2.073252 TCTATGACCTGTGGATCGCT 57.927 50.000 0.00 0.00 0.00 4.93
159 160 2.353208 GGATCTATGACCTGTGGATCGC 60.353 54.545 0.00 0.00 35.14 4.58
160 161 2.232452 GGGATCTATGACCTGTGGATCG 59.768 54.545 0.00 0.00 35.14 3.69
161 162 2.569404 GGGGATCTATGACCTGTGGATC 59.431 54.545 0.00 0.00 34.00 3.36
162 163 2.089982 TGGGGATCTATGACCTGTGGAT 60.090 50.000 0.00 0.00 0.00 3.41
163 164 1.293763 TGGGGATCTATGACCTGTGGA 59.706 52.381 0.00 0.00 0.00 4.02
164 165 1.696336 CTGGGGATCTATGACCTGTGG 59.304 57.143 0.00 0.00 0.00 4.17
165 166 2.632028 CTCTGGGGATCTATGACCTGTG 59.368 54.545 0.00 0.00 0.00 3.66
166 167 2.969628 CTCTGGGGATCTATGACCTGT 58.030 52.381 0.00 0.00 0.00 4.00
167 168 1.622811 GCTCTGGGGATCTATGACCTG 59.377 57.143 0.00 0.00 0.00 4.00
168 169 1.484065 GGCTCTGGGGATCTATGACCT 60.484 57.143 0.00 0.00 0.00 3.85
169 170 0.980423 GGCTCTGGGGATCTATGACC 59.020 60.000 0.00 0.00 0.00 4.02
170 171 0.605589 CGGCTCTGGGGATCTATGAC 59.394 60.000 0.00 0.00 0.00 3.06
171 172 0.188587 ACGGCTCTGGGGATCTATGA 59.811 55.000 0.00 0.00 0.00 2.15
172 173 0.605589 GACGGCTCTGGGGATCTATG 59.394 60.000 0.00 0.00 0.00 2.23
173 174 0.896019 CGACGGCTCTGGGGATCTAT 60.896 60.000 0.00 0.00 0.00 1.98
174 175 1.528542 CGACGGCTCTGGGGATCTA 60.529 63.158 0.00 0.00 0.00 1.98
175 176 2.835431 CGACGGCTCTGGGGATCT 60.835 66.667 0.00 0.00 0.00 2.75
176 177 3.148279 ACGACGGCTCTGGGGATC 61.148 66.667 0.00 0.00 0.00 3.36
177 178 3.461773 CACGACGGCTCTGGGGAT 61.462 66.667 0.00 0.00 0.00 3.85
188 189 2.962786 TGTTTCACCGCCACGACG 60.963 61.111 0.00 0.00 0.00 5.12
189 190 2.629763 GTGTTTCACCGCCACGAC 59.370 61.111 0.00 0.00 0.00 4.34
192 193 3.656045 CCCGTGTTTCACCGCCAC 61.656 66.667 0.00 0.00 0.00 5.01
193 194 2.684192 AATCCCGTGTTTCACCGCCA 62.684 55.000 0.00 0.00 0.00 5.69
194 195 0.674269 TAATCCCGTGTTTCACCGCC 60.674 55.000 0.00 0.00 0.00 6.13
195 196 0.445043 GTAATCCCGTGTTTCACCGC 59.555 55.000 0.00 0.00 0.00 5.68
196 197 0.717224 CGTAATCCCGTGTTTCACCG 59.283 55.000 0.00 0.00 0.00 4.94
197 198 0.445043 GCGTAATCCCGTGTTTCACC 59.555 55.000 0.00 0.00 0.00 4.02
198 199 0.094046 CGCGTAATCCCGTGTTTCAC 59.906 55.000 0.00 0.00 33.84 3.18
199 200 0.038435 TCGCGTAATCCCGTGTTTCA 60.038 50.000 5.77 0.00 39.28 2.69
200 201 1.257155 GATCGCGTAATCCCGTGTTTC 59.743 52.381 5.77 0.00 39.28 2.78
201 202 1.283736 GATCGCGTAATCCCGTGTTT 58.716 50.000 5.77 0.00 39.28 2.83
202 203 0.868602 CGATCGCGTAATCCCGTGTT 60.869 55.000 5.77 0.00 39.28 3.32
203 204 1.298863 CGATCGCGTAATCCCGTGT 60.299 57.895 5.77 0.00 39.28 4.49
204 205 2.014554 CCGATCGCGTAATCCCGTG 61.015 63.158 10.32 0.00 39.59 4.94
205 206 2.188829 TCCGATCGCGTAATCCCGT 61.189 57.895 10.32 0.00 35.23 5.28
206 207 1.728426 GTCCGATCGCGTAATCCCG 60.728 63.158 10.32 1.91 35.23 5.14
207 208 0.663568 CTGTCCGATCGCGTAATCCC 60.664 60.000 10.32 0.00 35.23 3.85
208 209 0.309922 TCTGTCCGATCGCGTAATCC 59.690 55.000 10.32 0.00 35.23 3.01
209 210 1.663445 CCTCTGTCCGATCGCGTAATC 60.663 57.143 10.32 1.16 35.23 1.75
210 211 0.311165 CCTCTGTCCGATCGCGTAAT 59.689 55.000 10.32 0.00 35.23 1.89
211 212 0.745486 TCCTCTGTCCGATCGCGTAA 60.745 55.000 10.32 0.00 35.23 3.18
212 213 1.153309 TCCTCTGTCCGATCGCGTA 60.153 57.895 10.32 0.00 35.23 4.42
213 214 2.437895 TCCTCTGTCCGATCGCGT 60.438 61.111 10.32 0.00 35.23 6.01
214 215 2.329690 CTCCTCTGTCCGATCGCG 59.670 66.667 10.32 0.00 37.24 5.87
215 216 1.791103 CTCCTCCTCTGTCCGATCGC 61.791 65.000 10.32 0.00 0.00 4.58
216 217 1.169661 CCTCCTCCTCTGTCCGATCG 61.170 65.000 8.51 8.51 0.00 3.69
217 218 0.825840 CCCTCCTCCTCTGTCCGATC 60.826 65.000 0.00 0.00 0.00 3.69
218 219 1.231641 CCCTCCTCCTCTGTCCGAT 59.768 63.158 0.00 0.00 0.00 4.18
219 220 2.684104 CCCTCCTCCTCTGTCCGA 59.316 66.667 0.00 0.00 0.00 4.55
220 221 3.151022 GCCCTCCTCCTCTGTCCG 61.151 72.222 0.00 0.00 0.00 4.79
221 222 3.151022 CGCCCTCCTCCTCTGTCC 61.151 72.222 0.00 0.00 0.00 4.02
222 223 3.844090 GCGCCCTCCTCCTCTGTC 61.844 72.222 0.00 0.00 0.00 3.51
257 258 0.588252 ATTCGATACAGCCGCATTGC 59.412 50.000 0.00 0.00 0.00 3.56
258 259 1.069703 CCATTCGATACAGCCGCATTG 60.070 52.381 0.00 0.00 0.00 2.82
259 260 1.229428 CCATTCGATACAGCCGCATT 58.771 50.000 0.00 0.00 0.00 3.56
260 261 1.230635 GCCATTCGATACAGCCGCAT 61.231 55.000 0.00 0.00 0.00 4.73
261 262 1.887242 GCCATTCGATACAGCCGCA 60.887 57.895 0.00 0.00 0.00 5.69
262 263 2.939022 GCCATTCGATACAGCCGC 59.061 61.111 0.00 0.00 0.00 6.53
263 264 2.943345 GCGCCATTCGATACAGCCG 61.943 63.158 0.00 0.00 41.67 5.52
264 265 2.939022 GCGCCATTCGATACAGCC 59.061 61.111 0.00 0.00 41.67 4.85
265 266 2.546321 CGCGCCATTCGATACAGC 59.454 61.111 0.00 0.00 41.67 4.40
266 267 1.278172 CTCCGCGCCATTCGATACAG 61.278 60.000 0.00 0.00 41.67 2.74
267 268 1.299850 CTCCGCGCCATTCGATACA 60.300 57.895 0.00 0.00 41.67 2.29
268 269 2.658707 GCTCCGCGCCATTCGATAC 61.659 63.158 0.00 0.00 41.67 2.24
269 270 2.355837 GCTCCGCGCCATTCGATA 60.356 61.111 0.00 0.00 41.67 2.92
289 290 4.509737 GTACGCACCTCCTCGGGC 62.510 72.222 0.00 0.00 36.97 6.13
290 291 2.754658 AGTACGCACCTCCTCGGG 60.755 66.667 0.00 0.00 36.97 5.14
291 292 2.772691 GGAGTACGCACCTCCTCGG 61.773 68.421 8.04 0.00 44.29 4.63
292 293 2.799371 GGAGTACGCACCTCCTCG 59.201 66.667 8.04 0.00 44.29 4.63
296 297 2.450609 TTTTCAGGAGTACGCACCTC 57.549 50.000 0.00 0.00 33.29 3.85
297 298 2.104281 ACTTTTTCAGGAGTACGCACCT 59.896 45.455 0.00 1.30 36.07 4.00
298 299 2.479275 GACTTTTTCAGGAGTACGCACC 59.521 50.000 0.00 0.00 0.00 5.01
299 300 3.184581 CAGACTTTTTCAGGAGTACGCAC 59.815 47.826 0.00 0.00 0.00 5.34
300 301 3.069016 TCAGACTTTTTCAGGAGTACGCA 59.931 43.478 0.00 0.00 0.00 5.24
301 302 3.650139 TCAGACTTTTTCAGGAGTACGC 58.350 45.455 0.00 0.00 0.00 4.42
302 303 4.022242 TCCTCAGACTTTTTCAGGAGTACG 60.022 45.833 0.00 0.00 0.00 3.67
303 304 5.470047 TCCTCAGACTTTTTCAGGAGTAC 57.530 43.478 0.00 0.00 0.00 2.73
304 305 5.187967 GGATCCTCAGACTTTTTCAGGAGTA 59.812 44.000 3.84 0.00 36.69 2.59
305 306 4.019771 GGATCCTCAGACTTTTTCAGGAGT 60.020 45.833 3.84 0.00 36.69 3.85
306 307 4.224818 AGGATCCTCAGACTTTTTCAGGAG 59.775 45.833 9.02 0.00 36.69 3.69
307 308 4.019860 CAGGATCCTCAGACTTTTTCAGGA 60.020 45.833 12.69 0.00 37.66 3.86
308 309 4.019860 TCAGGATCCTCAGACTTTTTCAGG 60.020 45.833 12.69 0.00 0.00 3.86
309 310 5.157940 TCAGGATCCTCAGACTTTTTCAG 57.842 43.478 12.69 0.00 0.00 3.02
310 311 5.567037 TTCAGGATCCTCAGACTTTTTCA 57.433 39.130 12.69 0.00 0.00 2.69
311 312 6.884280 TTTTCAGGATCCTCAGACTTTTTC 57.116 37.500 12.69 0.00 0.00 2.29
312 313 6.836007 ACTTTTTCAGGATCCTCAGACTTTTT 59.164 34.615 12.69 0.00 0.00 1.94
313 314 6.368805 ACTTTTTCAGGATCCTCAGACTTTT 58.631 36.000 12.69 0.00 0.00 2.27
314 315 5.946486 ACTTTTTCAGGATCCTCAGACTTT 58.054 37.500 12.69 0.00 0.00 2.66
315 316 5.574970 ACTTTTTCAGGATCCTCAGACTT 57.425 39.130 12.69 0.00 0.00 3.01
316 317 5.574970 AACTTTTTCAGGATCCTCAGACT 57.425 39.130 12.69 0.00 0.00 3.24
317 318 7.445707 ACTTAAACTTTTTCAGGATCCTCAGAC 59.554 37.037 12.69 0.00 0.00 3.51
318 319 7.445402 CACTTAAACTTTTTCAGGATCCTCAGA 59.555 37.037 12.69 4.19 0.00 3.27
319 320 7.445402 TCACTTAAACTTTTTCAGGATCCTCAG 59.555 37.037 12.69 1.24 0.00 3.35
320 321 7.228706 GTCACTTAAACTTTTTCAGGATCCTCA 59.771 37.037 12.69 0.00 0.00 3.86
321 322 7.228706 TGTCACTTAAACTTTTTCAGGATCCTC 59.771 37.037 12.69 0.00 0.00 3.71
322 323 7.060421 TGTCACTTAAACTTTTTCAGGATCCT 58.940 34.615 9.02 9.02 0.00 3.24
323 324 7.272037 TGTCACTTAAACTTTTTCAGGATCC 57.728 36.000 2.48 2.48 0.00 3.36
324 325 8.352942 ACATGTCACTTAAACTTTTTCAGGATC 58.647 33.333 0.00 0.00 0.00 3.36
325 326 8.137437 CACATGTCACTTAAACTTTTTCAGGAT 58.863 33.333 0.00 0.00 0.00 3.24
326 327 7.122055 ACACATGTCACTTAAACTTTTTCAGGA 59.878 33.333 0.00 0.00 0.00 3.86
327 328 7.257722 ACACATGTCACTTAAACTTTTTCAGG 58.742 34.615 0.00 0.00 0.00 3.86
328 329 8.586273 CAACACATGTCACTTAAACTTTTTCAG 58.414 33.333 0.00 0.00 0.00 3.02
329 330 8.085296 ACAACACATGTCACTTAAACTTTTTCA 58.915 29.630 0.00 0.00 37.96 2.69
330 331 8.460831 ACAACACATGTCACTTAAACTTTTTC 57.539 30.769 0.00 0.00 37.96 2.29
331 332 8.825667 AACAACACATGTCACTTAAACTTTTT 57.174 26.923 0.00 0.00 42.99 1.94
332 333 8.825667 AAACAACACATGTCACTTAAACTTTT 57.174 26.923 0.00 0.00 42.99 2.27
333 334 8.303876 AGAAACAACACATGTCACTTAAACTTT 58.696 29.630 0.00 0.00 42.99 2.66
334 335 7.754924 CAGAAACAACACATGTCACTTAAACTT 59.245 33.333 0.00 0.00 42.99 2.66
335 336 7.250569 CAGAAACAACACATGTCACTTAAACT 58.749 34.615 0.00 0.00 42.99 2.66
336 337 6.472163 CCAGAAACAACACATGTCACTTAAAC 59.528 38.462 0.00 0.00 42.99 2.01
337 338 6.151985 ACCAGAAACAACACATGTCACTTAAA 59.848 34.615 0.00 0.00 42.99 1.52
338 339 5.650266 ACCAGAAACAACACATGTCACTTAA 59.350 36.000 0.00 0.00 42.99 1.85
339 340 5.189928 ACCAGAAACAACACATGTCACTTA 58.810 37.500 0.00 0.00 42.99 2.24
340 341 4.016444 ACCAGAAACAACACATGTCACTT 58.984 39.130 0.00 0.00 42.99 3.16
341 342 3.620488 ACCAGAAACAACACATGTCACT 58.380 40.909 0.00 0.00 42.99 3.41
342 343 4.104776 CAACCAGAAACAACACATGTCAC 58.895 43.478 0.00 0.00 42.99 3.67
343 344 3.130164 CCAACCAGAAACAACACATGTCA 59.870 43.478 0.00 0.00 42.99 3.58
344 345 3.130340 ACCAACCAGAAACAACACATGTC 59.870 43.478 0.00 0.00 42.99 3.06
345 346 3.096092 ACCAACCAGAAACAACACATGT 58.904 40.909 0.00 0.00 46.82 3.21
346 347 3.799281 ACCAACCAGAAACAACACATG 57.201 42.857 0.00 0.00 0.00 3.21
347 348 3.181491 CGAACCAACCAGAAACAACACAT 60.181 43.478 0.00 0.00 0.00 3.21
348 349 2.162608 CGAACCAACCAGAAACAACACA 59.837 45.455 0.00 0.00 0.00 3.72
349 350 2.420722 TCGAACCAACCAGAAACAACAC 59.579 45.455 0.00 0.00 0.00 3.32
350 351 2.712709 TCGAACCAACCAGAAACAACA 58.287 42.857 0.00 0.00 0.00 3.33
351 352 3.550030 CCATCGAACCAACCAGAAACAAC 60.550 47.826 0.00 0.00 0.00 3.32
352 353 2.621055 CCATCGAACCAACCAGAAACAA 59.379 45.455 0.00 0.00 0.00 2.83
353 354 2.158740 TCCATCGAACCAACCAGAAACA 60.159 45.455 0.00 0.00 0.00 2.83
354 355 2.500229 TCCATCGAACCAACCAGAAAC 58.500 47.619 0.00 0.00 0.00 2.78
355 356 2.940994 TCCATCGAACCAACCAGAAA 57.059 45.000 0.00 0.00 0.00 2.52
356 357 4.258543 GTTATCCATCGAACCAACCAGAA 58.741 43.478 0.00 0.00 0.00 3.02
357 358 3.677700 CGTTATCCATCGAACCAACCAGA 60.678 47.826 0.00 0.00 0.00 3.86
358 359 2.607635 CGTTATCCATCGAACCAACCAG 59.392 50.000 0.00 0.00 0.00 4.00
359 360 2.623535 CGTTATCCATCGAACCAACCA 58.376 47.619 0.00 0.00 0.00 3.67
360 361 1.937899 CCGTTATCCATCGAACCAACC 59.062 52.381 0.00 0.00 0.00 3.77
361 362 1.937899 CCCGTTATCCATCGAACCAAC 59.062 52.381 0.00 0.00 0.00 3.77
362 363 1.555992 ACCCGTTATCCATCGAACCAA 59.444 47.619 0.00 0.00 0.00 3.67
363 364 1.137479 GACCCGTTATCCATCGAACCA 59.863 52.381 0.00 0.00 0.00 3.67
364 365 1.137479 TGACCCGTTATCCATCGAACC 59.863 52.381 0.00 0.00 0.00 3.62
365 366 2.199236 GTGACCCGTTATCCATCGAAC 58.801 52.381 0.00 0.00 0.00 3.95
366 367 1.202325 CGTGACCCGTTATCCATCGAA 60.202 52.381 0.00 0.00 0.00 3.71
367 368 0.382873 CGTGACCCGTTATCCATCGA 59.617 55.000 0.00 0.00 0.00 3.59
368 369 2.881441 CGTGACCCGTTATCCATCG 58.119 57.895 0.00 0.00 0.00 3.84
378 379 2.548295 CCAACCCAAACGTGACCCG 61.548 63.158 0.00 0.00 44.03 5.28
379 380 2.197605 CCCAACCCAAACGTGACCC 61.198 63.158 0.00 0.00 0.00 4.46
380 381 1.454295 ACCCAACCCAAACGTGACC 60.454 57.895 0.00 0.00 0.00 4.02
381 382 1.033202 ACACCCAACCCAAACGTGAC 61.033 55.000 0.00 0.00 0.00 3.67
382 383 1.032657 CACACCCAACCCAAACGTGA 61.033 55.000 0.00 0.00 0.00 4.35
383 384 1.435515 CACACCCAACCCAAACGTG 59.564 57.895 0.00 0.00 0.00 4.49
384 385 2.419739 GCACACCCAACCCAAACGT 61.420 57.895 0.00 0.00 0.00 3.99
385 386 2.415426 GCACACCCAACCCAAACG 59.585 61.111 0.00 0.00 0.00 3.60
386 387 1.142965 GTGCACACCCAACCCAAAC 59.857 57.895 13.17 0.00 0.00 2.93
387 388 0.689080 ATGTGCACACCCAACCCAAA 60.689 50.000 24.37 0.00 0.00 3.28
388 389 0.689080 AATGTGCACACCCAACCCAA 60.689 50.000 24.37 0.00 0.00 4.12
389 390 0.186143 TAATGTGCACACCCAACCCA 59.814 50.000 24.37 0.00 0.00 4.51
390 391 1.333177 TTAATGTGCACACCCAACCC 58.667 50.000 24.37 0.00 0.00 4.11
391 392 4.441356 CCATATTAATGTGCACACCCAACC 60.441 45.833 24.37 0.00 0.00 3.77
392 393 4.159506 ACCATATTAATGTGCACACCCAAC 59.840 41.667 24.37 0.00 0.00 3.77
393 394 4.348486 ACCATATTAATGTGCACACCCAA 58.652 39.130 24.37 16.25 0.00 4.12
394 395 3.974719 ACCATATTAATGTGCACACCCA 58.025 40.909 24.37 9.03 0.00 4.51
395 396 5.337578 AAACCATATTAATGTGCACACCC 57.662 39.130 24.37 0.00 0.00 4.61
396 397 6.320164 TCCTAAACCATATTAATGTGCACACC 59.680 38.462 24.37 0.00 0.00 4.16
397 398 7.328277 TCCTAAACCATATTAATGTGCACAC 57.672 36.000 24.37 0.00 0.00 3.82
398 399 9.806448 ATATCCTAAACCATATTAATGTGCACA 57.194 29.630 24.08 24.08 0.00 4.57
462 463 1.531149 ACGACCGTTTCTTTGCTGATG 59.469 47.619 0.00 0.00 0.00 3.07
463 464 1.878953 ACGACCGTTTCTTTGCTGAT 58.121 45.000 0.00 0.00 0.00 2.90
464 465 1.658994 AACGACCGTTTCTTTGCTGA 58.341 45.000 1.53 0.00 34.22 4.26
519 520 4.862574 CGTCATCGTCAACCAGAGATAAAA 59.137 41.667 0.00 0.00 0.00 1.52
525 526 0.388520 TGCGTCATCGTCAACCAGAG 60.389 55.000 0.00 0.00 39.49 3.35
541 542 1.411394 CAAACTCCTGTTGCAATGCG 58.589 50.000 0.59 0.00 36.39 4.73
543 544 2.400399 CTGCAAACTCCTGTTGCAATG 58.600 47.619 12.39 0.00 38.59 2.82
545 546 0.746063 CCTGCAAACTCCTGTTGCAA 59.254 50.000 12.39 0.00 38.59 4.08
548 549 1.283793 CGCCTGCAAACTCCTGTTG 59.716 57.895 0.00 0.00 36.39 3.33
573 574 1.446272 GAGAGAACCGCGTTGAGGG 60.446 63.158 4.92 0.00 0.00 4.30
951 1217 7.406916 AGGATTATATACGAGAGATCCTGTGT 58.593 38.462 9.63 0.00 41.24 3.72
980 1246 8.906867 CAAGAATGGAATATGTAGTGAAATGGT 58.093 33.333 0.00 0.00 0.00 3.55
981 1247 8.906867 ACAAGAATGGAATATGTAGTGAAATGG 58.093 33.333 0.00 0.00 0.00 3.16
989 1255 8.064222 CGCAGTAAACAAGAATGGAATATGTAG 58.936 37.037 0.00 0.00 0.00 2.74
1777 2043 4.504916 CCGAGGAGGAGCGTGCTG 62.505 72.222 0.00 0.00 45.00 4.41
1922 2188 3.585990 CGCGTTGGGATGGATGGC 61.586 66.667 0.00 0.00 0.00 4.40
2032 2298 3.133767 TAGGGACTCAATCGCGGCG 62.134 63.158 17.70 17.70 44.92 6.46
2191 2457 3.545703 GGACCCCAAGATCATGTAGTTG 58.454 50.000 0.00 0.00 0.00 3.16
2254 2520 2.815211 TTGCCGAGCGTGCTCATC 60.815 61.111 20.75 11.93 42.86 2.92
2374 2640 2.092681 GTCAGACATGCATGTACACACG 59.907 50.000 31.45 15.78 41.95 4.49
2451 2718 6.036735 CAGTTTACTTTCTGAACTCAACCGAA 59.963 38.462 0.00 0.00 31.63 4.30
2452 2719 5.522460 CAGTTTACTTTCTGAACTCAACCGA 59.478 40.000 0.00 0.00 31.63 4.69
2494 2761 6.415573 AGGATACGCTGAAGGTTCTAAATTT 58.584 36.000 0.00 0.00 46.39 1.82
2495 2762 5.990668 AGGATACGCTGAAGGTTCTAAATT 58.009 37.500 0.00 0.00 46.39 1.82
2496 2763 5.453480 GGAGGATACGCTGAAGGTTCTAAAT 60.453 44.000 0.00 0.00 46.39 1.40
2497 2764 4.142004 GGAGGATACGCTGAAGGTTCTAAA 60.142 45.833 0.00 0.00 46.39 1.85
2498 2765 3.383825 GGAGGATACGCTGAAGGTTCTAA 59.616 47.826 0.00 0.00 46.39 2.10
2499 2766 2.957006 GGAGGATACGCTGAAGGTTCTA 59.043 50.000 0.00 0.00 46.39 2.10
2500 2767 1.757699 GGAGGATACGCTGAAGGTTCT 59.242 52.381 0.00 0.00 46.39 3.01
2501 2768 2.226602 GGAGGATACGCTGAAGGTTC 57.773 55.000 0.00 0.00 46.39 3.62
2509 2776 0.890090 GCTAGGTCGGAGGATACGCT 60.890 60.000 0.00 0.00 46.39 5.07
2510 2777 1.580437 GCTAGGTCGGAGGATACGC 59.420 63.158 0.00 0.00 46.39 4.42
2511 2778 0.536687 TGGCTAGGTCGGAGGATACG 60.537 60.000 0.00 0.00 46.39 3.06
2512 2779 1.202903 TCTGGCTAGGTCGGAGGATAC 60.203 57.143 0.00 0.00 0.00 2.24
2513 2780 1.146452 TCTGGCTAGGTCGGAGGATA 58.854 55.000 0.00 0.00 0.00 2.59
2514 2781 0.485099 ATCTGGCTAGGTCGGAGGAT 59.515 55.000 0.00 0.00 0.00 3.24
2515 2782 1.146452 TATCTGGCTAGGTCGGAGGA 58.854 55.000 0.00 0.00 0.00 3.71
2517 2784 5.163499 GGATTAATATCTGGCTAGGTCGGAG 60.163 48.000 0.00 0.00 0.00 4.63
2518 2785 4.710375 GGATTAATATCTGGCTAGGTCGGA 59.290 45.833 0.00 0.00 0.00 4.55
2552 2819 5.637810 CGAGTTCTGTTTTGTAAGAGGCATA 59.362 40.000 0.00 0.00 0.00 3.14
2577 2844 9.396938 GATTTTGAATTAGCAAAACCATTTTGG 57.603 29.630 14.16 0.00 46.74 3.28
2578 2845 9.105206 CGATTTTGAATTAGCAAAACCATTTTG 57.895 29.630 9.22 9.22 46.74 2.44
2630 2897 8.669946 TGACTACTGACTGAGATTAGTATCAG 57.330 38.462 8.20 8.20 46.58 2.90
2672 2939 8.947115 ACCAGCTATTTCTATGTTTACTGAAAC 58.053 33.333 0.00 0.00 44.48 2.78
2723 3298 6.201425 CCCAAACTTGAAAATCATGTGACTTG 59.799 38.462 0.00 0.00 35.34 3.16
2742 3317 5.007724 CGCCAGAGAATAGATTTACCCAAAC 59.992 44.000 0.00 0.00 0.00 2.93
2755 3330 2.771943 AGGAATCAACCGCCAGAGAATA 59.228 45.455 0.00 0.00 34.73 1.75
2759 3334 1.470098 CAAAGGAATCAACCGCCAGAG 59.530 52.381 0.00 0.00 34.73 3.35
2764 3339 2.552315 TCTTGACAAAGGAATCAACCGC 59.448 45.455 0.00 0.00 33.90 5.68
2775 3350 7.795859 ACAAAACAACACAAATCTTGACAAAG 58.204 30.769 0.00 0.00 34.45 2.77
2828 3404 1.808945 CCGAGCAAGTCAAAATCAGCT 59.191 47.619 0.00 0.00 34.61 4.24
2873 3450 3.405823 AAACAGGGGCATGTCAAAATG 57.594 42.857 0.00 0.00 31.50 2.32
2931 3509 3.119029 GCTTCAAGCCCAATAGAAATGCA 60.119 43.478 0.00 0.00 34.48 3.96
2975 3573 7.096065 GCAAAAGCAGAAACACCTACAAATAAG 60.096 37.037 0.00 0.00 0.00 1.73
2978 3576 5.049828 GCAAAAGCAGAAACACCTACAAAT 58.950 37.500 0.00 0.00 0.00 2.32
2985 3583 3.000222 CGAAAAGCAAAAGCAGAAACACC 60.000 43.478 0.00 0.00 0.00 4.16
3034 3632 6.370994 TGCATGGCAAAAATACCAATGTAAAG 59.629 34.615 0.00 0.00 39.96 1.85
3059 3657 5.473066 AGCTAAAGTGATGCCAAAAATGT 57.527 34.783 0.00 0.00 0.00 2.71
3060 3658 5.807011 GGTAGCTAAAGTGATGCCAAAAATG 59.193 40.000 0.00 0.00 0.00 2.32
3075 3673 4.644163 TTTTAGGCCACTGGTAGCTAAA 57.356 40.909 5.01 0.00 0.00 1.85
3083 3681 5.861787 CGAAAATAACTTTTTAGGCCACTGG 59.138 40.000 5.01 0.00 34.73 4.00
3084 3682 5.861787 CCGAAAATAACTTTTTAGGCCACTG 59.138 40.000 5.01 0.00 34.73 3.66
3088 3690 6.016213 TGTCCGAAAATAACTTTTTAGGCC 57.984 37.500 0.00 0.00 34.73 5.19
3169 3777 2.559668 CTCAGCCCAAAACACATCACAT 59.440 45.455 0.00 0.00 0.00 3.21
3199 3807 9.487442 AATTAACTAACCCAAATATGTGGTCAT 57.513 29.630 11.17 0.00 36.90 3.06
3221 3829 2.156098 GGTTTGGTCGCACAGGAATTA 58.844 47.619 0.00 0.00 0.00 1.40
3236 3845 2.309504 GGGGGAGAGGGAGGGTTTG 61.310 68.421 0.00 0.00 0.00 2.93
3239 3848 2.511458 AAAGGGGGAGAGGGAGGGT 61.511 63.158 0.00 0.00 0.00 4.34
3242 3851 1.617839 AGCAAAGGGGGAGAGGGAG 60.618 63.158 0.00 0.00 0.00 4.30
3416 4033 2.230992 GCATGCCACAACAAAGTATCCA 59.769 45.455 6.36 0.00 0.00 3.41
3417 4034 2.417243 GGCATGCCACAACAAAGTATCC 60.417 50.000 32.08 0.00 35.81 2.59
3418 4035 2.417243 GGGCATGCCACAACAAAGTATC 60.417 50.000 36.56 11.88 37.98 2.24
3426 4043 2.406616 CGGTAGGGCATGCCACAAC 61.407 63.158 36.56 27.83 37.98 3.32
3427 4044 2.045438 CGGTAGGGCATGCCACAA 60.045 61.111 36.56 19.09 37.98 3.33
3428 4045 4.794648 GCGGTAGGGCATGCCACA 62.795 66.667 36.56 21.41 37.98 4.17
3429 4046 4.794648 TGCGGTAGGGCATGCCAC 62.795 66.667 36.56 26.39 38.17 5.01
3430 4047 2.852563 ATTTGCGGTAGGGCATGCCA 62.853 55.000 36.56 16.33 43.52 4.92
3432 4049 1.068333 CATATTTGCGGTAGGGCATGC 60.068 52.381 9.90 9.90 43.52 4.06
3433 4050 2.226437 GTCATATTTGCGGTAGGGCATG 59.774 50.000 0.00 0.00 43.52 4.06
3434 4051 2.106511 AGTCATATTTGCGGTAGGGCAT 59.893 45.455 0.00 0.00 43.52 4.40
3435 4052 1.488812 AGTCATATTTGCGGTAGGGCA 59.511 47.619 0.00 0.00 42.12 5.36
3436 4053 2.256117 AGTCATATTTGCGGTAGGGC 57.744 50.000 0.00 0.00 0.00 5.19
3437 4054 4.602340 ACTAGTCATATTTGCGGTAGGG 57.398 45.455 0.00 0.00 0.00 3.53
3438 4055 5.919141 GTGTACTAGTCATATTTGCGGTAGG 59.081 44.000 0.00 0.00 0.00 3.18
3439 4056 6.736123 AGTGTACTAGTCATATTTGCGGTAG 58.264 40.000 0.00 0.00 0.00 3.18
3440 4057 6.704289 AGTGTACTAGTCATATTTGCGGTA 57.296 37.500 0.00 0.00 0.00 4.02
3442 4059 6.016527 TCCTAGTGTACTAGTCATATTTGCGG 60.017 42.308 15.72 0.34 43.34 5.69
3444 4061 7.014422 ACCTCCTAGTGTACTAGTCATATTTGC 59.986 40.741 15.72 0.00 43.34 3.68
3445 4062 8.466617 ACCTCCTAGTGTACTAGTCATATTTG 57.533 38.462 15.72 1.31 43.34 2.32
3448 4065 7.390013 TGACCTCCTAGTGTACTAGTCATAT 57.610 40.000 15.72 0.69 43.34 1.78
3450 4067 5.712084 TGACCTCCTAGTGTACTAGTCAT 57.288 43.478 15.72 1.56 43.34 3.06
3453 4070 4.230041 ACCATGACCTCCTAGTGTACTAGT 59.770 45.833 15.72 0.00 43.34 2.57
3454 4071 4.580995 CACCATGACCTCCTAGTGTACTAG 59.419 50.000 11.27 11.27 44.22 2.57
3455 4072 4.228895 TCACCATGACCTCCTAGTGTACTA 59.771 45.833 0.00 0.00 0.00 1.82
3457 4074 3.362706 TCACCATGACCTCCTAGTGTAC 58.637 50.000 0.00 0.00 0.00 2.90
3458 4075 3.011369 ACTCACCATGACCTCCTAGTGTA 59.989 47.826 0.00 0.00 0.00 2.90
3459 4076 2.225394 ACTCACCATGACCTCCTAGTGT 60.225 50.000 0.00 0.00 0.00 3.55
3460 4077 2.461695 ACTCACCATGACCTCCTAGTG 58.538 52.381 0.00 0.00 0.00 2.74
3461 4078 2.930109 ACTCACCATGACCTCCTAGT 57.070 50.000 0.00 0.00 0.00 2.57
3462 4079 2.619177 CGTACTCACCATGACCTCCTAG 59.381 54.545 0.00 0.00 0.00 3.02
3464 4081 1.272536 ACGTACTCACCATGACCTCCT 60.273 52.381 0.00 0.00 0.00 3.69
3465 4082 1.134560 GACGTACTCACCATGACCTCC 59.865 57.143 0.00 0.00 0.00 4.30
3466 4083 1.202154 CGACGTACTCACCATGACCTC 60.202 57.143 0.00 0.00 0.00 3.85
3472 4340 1.250328 TTGACCGACGTACTCACCAT 58.750 50.000 0.00 0.00 0.00 3.55
3475 4343 2.624316 TCATTGACCGACGTACTCAC 57.376 50.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.