Multiple sequence alignment - TraesCS2A01G214200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G214200 chr2A 100.000 5807 0 0 1 5807 199800886 199795080 0.000000e+00 10724
1 TraesCS2A01G214200 chr2B 96.605 1885 56 5 3168 5051 243082639 243080762 0.000000e+00 3120
2 TraesCS2A01G214200 chr2B 94.659 880 24 12 1765 2636 243083767 243082903 0.000000e+00 1343
3 TraesCS2A01G214200 chr2B 92.550 604 27 14 912 1503 243084902 243084305 0.000000e+00 850
4 TraesCS2A01G214200 chr2B 96.578 263 8 1 2877 3138 243082903 243082641 8.940000e-118 435
5 TraesCS2A01G214200 chr2B 93.191 235 16 0 1533 1767 243084057 243083823 4.310000e-91 346
6 TraesCS2A01G214200 chr2B 85.246 305 17 9 416 698 243085630 243085332 7.360000e-74 289
7 TraesCS2A01G214200 chr2B 95.679 162 6 1 678 838 243085320 243085159 5.770000e-65 259
8 TraesCS2A01G214200 chr2B 92.814 167 8 2 5228 5393 243080121 243079958 7.520000e-59 239
9 TraesCS2A01G214200 chr2B 87.903 124 3 3 5386 5509 243079878 243079767 1.010000e-27 135
10 TraesCS2A01G214200 chr2B 82.432 148 7 11 5052 5199 243080249 243080121 1.710000e-20 111
11 TraesCS2A01G214200 chr2D 92.287 2178 119 22 2877 5051 187128446 187126315 0.000000e+00 3046
12 TraesCS2A01G214200 chr2D 89.227 854 39 28 661 1505 187130463 187129654 0.000000e+00 1018
13 TraesCS2A01G214200 chr2D 95.413 327 14 1 5148 5473 187126165 187125839 2.400000e-143 520
14 TraesCS2A01G214200 chr2D 89.097 321 23 8 2320 2636 187128758 187128446 7.060000e-104 388
15 TraesCS2A01G214200 chr2D 80.600 500 52 26 1777 2248 187129430 187128948 1.550000e-90 344
16 TraesCS2A01G214200 chr2D 84.932 365 13 13 315 664 187131016 187130679 1.210000e-86 331
17 TraesCS2A01G214200 chr2D 95.808 167 5 2 5642 5807 187116566 187116401 9.590000e-68 268
18 TraesCS2A01G214200 chr2D 96.689 151 5 0 5493 5643 187117040 187116890 9.660000e-63 252
19 TraesCS2A01G214200 chr2D 93.382 136 9 0 4214 4349 627364870 627365005 9.870000e-48 202
20 TraesCS2A01G214200 chr2D 91.176 136 12 0 4214 4349 647189349 647189484 9.940000e-43 185
21 TraesCS2A01G214200 chr5D 96.552 261 7 2 2621 2880 306188332 306188591 1.160000e-116 431
22 TraesCS2A01G214200 chr5D 95.547 247 11 0 2636 2882 548658267 548658021 4.220000e-106 396
23 TraesCS2A01G214200 chr5D 86.207 174 22 2 32 203 302853230 302853057 2.760000e-43 187
24 TraesCS2A01G214200 chr1D 97.541 244 6 0 2634 2877 84700469 84700226 9.000000e-113 418
25 TraesCS2A01G214200 chr1D 96.721 244 8 0 2634 2877 303411874 303412117 1.950000e-109 407
26 TraesCS2A01G214200 chr1D 77.733 247 55 0 4552 4798 351257048 351257294 1.010000e-32 152
27 TraesCS2A01G214200 chr3D 96.721 244 8 0 2634 2877 371889344 371889101 1.950000e-109 407
28 TraesCS2A01G214200 chr7B 96.708 243 8 0 2636 2878 470170557 470170315 7.010000e-109 405
29 TraesCS2A01G214200 chr5A 97.059 238 7 0 2642 2879 298184871 298184634 9.060000e-108 401
30 TraesCS2A01G214200 chr6D 96.296 243 8 1 2635 2877 307857185 307857426 1.170000e-106 398
31 TraesCS2A01G214200 chr6D 95.885 243 9 1 2636 2877 221277038 221276796 5.450000e-105 392
32 TraesCS2A01G214200 chr3B 91.176 136 12 0 4214 4349 70845675 70845810 9.940000e-43 185
33 TraesCS2A01G214200 chr4D 90.647 139 12 1 4214 4352 340076185 340076048 3.570000e-42 183
34 TraesCS2A01G214200 chr1B 78.543 247 53 0 4552 4798 473868108 473868354 4.660000e-36 163
35 TraesCS2A01G214200 chr1A 78.138 247 54 0 4552 4798 452045943 452046189 2.170000e-34 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G214200 chr2A 199795080 199800886 5806 True 10724.000000 10724 100.000000 1 5807 1 chr2A.!!$R1 5806
1 TraesCS2A01G214200 chr2B 243079767 243085630 5863 True 712.700000 3120 91.765700 416 5509 10 chr2B.!!$R1 5093
2 TraesCS2A01G214200 chr2D 187125839 187131016 5177 True 941.166667 3046 88.592667 315 5473 6 chr2D.!!$R2 5158
3 TraesCS2A01G214200 chr2D 187116401 187117040 639 True 260.000000 268 96.248500 5493 5807 2 chr2D.!!$R1 314

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
909 1205 0.188587 TCAGTCCACACCTGTCCTCT 59.811 55.0 0.0 0.0 0.00 3.69 F
2690 3650 0.322456 GGTGTGCCTGCCATCTTGTA 60.322 55.0 0.0 0.0 0.00 2.41 F
2775 3735 0.036010 CCGCACCTCTCTCCACATTT 60.036 55.0 0.0 0.0 0.00 2.32 F
2874 3834 0.394216 AACGCATGGGCATCTTGCTA 60.394 50.0 10.1 0.0 44.28 3.49 F
2875 3835 0.816825 ACGCATGGGCATCTTGCTAG 60.817 55.0 10.1 0.0 44.28 3.42 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2756 3716 0.036010 AAATGTGGAGAGAGGTGCGG 60.036 55.000 0.0 0.0 0.00 5.69 R
3513 4475 1.298667 GCGGACCATGGTAGGTTGT 59.701 57.895 19.8 0.0 43.38 3.32 R
3639 4601 2.295629 TGCAAAAACGCTTCATCCATGA 59.704 40.909 0.0 0.0 34.44 3.07 R
4578 5542 2.741092 GGGACCAGCTTCACGTCA 59.259 61.111 0.0 0.0 0.00 4.35 R
4945 5909 9.998106 GTACAGGTGAATATGTGAGGTAATAAT 57.002 33.333 0.0 0.0 0.00 1.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 8.824159 AATATATTAGTCTGTGACTGCATGTC 57.176 34.615 10.14 8.75 43.30 3.06
43 44 4.815533 ATTAGTCTGTGACTGCATGTCT 57.184 40.909 10.14 0.50 43.30 3.41
44 45 5.921962 ATTAGTCTGTGACTGCATGTCTA 57.078 39.130 10.14 6.03 43.30 2.59
45 46 5.921962 TTAGTCTGTGACTGCATGTCTAT 57.078 39.130 10.14 1.80 43.30 1.98
46 47 4.815533 AGTCTGTGACTGCATGTCTATT 57.184 40.909 14.60 0.00 41.76 1.73
47 48 5.921962 AGTCTGTGACTGCATGTCTATTA 57.078 39.130 14.60 0.00 41.76 0.98
48 49 6.477053 AGTCTGTGACTGCATGTCTATTAT 57.523 37.500 14.60 0.00 41.76 1.28
49 50 6.882656 AGTCTGTGACTGCATGTCTATTATT 58.117 36.000 14.60 0.00 41.76 1.40
50 51 8.011844 AGTCTGTGACTGCATGTCTATTATTA 57.988 34.615 14.60 0.00 41.76 0.98
51 52 7.923344 AGTCTGTGACTGCATGTCTATTATTAC 59.077 37.037 14.60 6.05 41.76 1.89
52 53 6.918022 TCTGTGACTGCATGTCTATTATTACG 59.082 38.462 14.60 0.00 45.54 3.18
53 54 6.569780 TGTGACTGCATGTCTATTATTACGT 58.430 36.000 14.60 0.00 45.54 3.57
54 55 7.039270 TGTGACTGCATGTCTATTATTACGTT 58.961 34.615 14.60 0.00 45.54 3.99
55 56 7.010091 TGTGACTGCATGTCTATTATTACGTTG 59.990 37.037 14.60 0.00 45.54 4.10
56 57 7.222031 GTGACTGCATGTCTATTATTACGTTGA 59.778 37.037 14.60 0.00 45.54 3.18
57 58 7.926018 TGACTGCATGTCTATTATTACGTTGAT 59.074 33.333 14.60 0.00 45.54 2.57
58 59 8.076714 ACTGCATGTCTATTATTACGTTGATG 57.923 34.615 0.00 0.00 0.00 3.07
59 60 6.887368 TGCATGTCTATTATTACGTTGATGC 58.113 36.000 0.00 0.00 34.43 3.91
60 61 6.009474 GCATGTCTATTATTACGTTGATGCG 58.991 40.000 0.00 0.00 37.94 4.73
61 62 5.570262 TGTCTATTATTACGTTGATGCGC 57.430 39.130 0.00 0.00 34.88 6.09
62 63 5.286438 TGTCTATTATTACGTTGATGCGCT 58.714 37.500 9.73 0.00 34.88 5.92
63 64 6.440436 TGTCTATTATTACGTTGATGCGCTA 58.560 36.000 9.73 0.00 34.88 4.26
64 65 6.919115 TGTCTATTATTACGTTGATGCGCTAA 59.081 34.615 9.73 0.00 34.88 3.09
65 66 7.435784 TGTCTATTATTACGTTGATGCGCTAAA 59.564 33.333 9.73 0.00 34.88 1.85
66 67 8.270799 GTCTATTATTACGTTGATGCGCTAAAA 58.729 33.333 9.73 0.00 34.88 1.52
67 68 8.984764 TCTATTATTACGTTGATGCGCTAAAAT 58.015 29.630 9.73 0.00 34.88 1.82
68 69 9.250986 CTATTATTACGTTGATGCGCTAAAATC 57.749 33.333 9.73 3.38 34.88 2.17
69 70 5.734855 ATTACGTTGATGCGCTAAAATCT 57.265 34.783 9.73 0.00 34.88 2.40
70 71 5.539582 TTACGTTGATGCGCTAAAATCTT 57.460 34.783 9.73 0.00 34.88 2.40
71 72 6.650239 TTACGTTGATGCGCTAAAATCTTA 57.350 33.333 9.73 0.00 34.88 2.10
72 73 5.143916 ACGTTGATGCGCTAAAATCTTAG 57.856 39.130 9.73 1.55 38.06 2.18
92 93 8.806429 TCTTAGCAGATTTTTGTATGGAATCA 57.194 30.769 0.00 0.00 33.34 2.57
93 94 9.412460 TCTTAGCAGATTTTTGTATGGAATCAT 57.588 29.630 0.00 0.00 37.40 2.45
94 95 9.674824 CTTAGCAGATTTTTGTATGGAATCATC 57.325 33.333 0.00 0.00 34.96 2.92
95 96 7.649533 AGCAGATTTTTGTATGGAATCATCA 57.350 32.000 0.00 0.00 34.96 3.07
96 97 8.246430 AGCAGATTTTTGTATGGAATCATCAT 57.754 30.769 0.00 0.00 34.96 2.45
97 98 8.141909 AGCAGATTTTTGTATGGAATCATCATG 58.858 33.333 0.00 0.00 34.96 3.07
98 99 8.139350 GCAGATTTTTGTATGGAATCATCATGA 58.861 33.333 0.00 0.00 34.96 3.07
110 111 9.755122 ATGGAATCATCATGATTTATCTGTCAT 57.245 29.630 14.26 7.25 46.20 3.06
138 139 9.781633 TTACTGTTAAGCACTTATTTGGTAAGA 57.218 29.630 2.12 0.00 41.99 2.10
139 140 8.685838 ACTGTTAAGCACTTATTTGGTAAGAA 57.314 30.769 2.12 0.00 41.99 2.52
140 141 9.297037 ACTGTTAAGCACTTATTTGGTAAGAAT 57.703 29.630 2.12 0.00 41.99 2.40
146 147 9.643693 AAGCACTTATTTGGTAAGAATTCATTG 57.356 29.630 8.44 0.00 41.99 2.82
147 148 9.023962 AGCACTTATTTGGTAAGAATTCATTGA 57.976 29.630 8.44 0.00 41.99 2.57
148 149 9.076596 GCACTTATTTGGTAAGAATTCATTGAC 57.923 33.333 8.44 0.00 41.99 3.18
159 160 9.959749 GTAAGAATTCATTGACTTACCAAACAA 57.040 29.630 8.44 0.00 38.86 2.83
161 162 9.883142 AAGAATTCATTGACTTACCAAACAAAA 57.117 25.926 8.44 0.00 0.00 2.44
215 216 7.429636 TGTGAGTCTATTTTAAGGAAAACCG 57.570 36.000 0.00 0.00 37.37 4.44
216 217 6.428771 TGTGAGTCTATTTTAAGGAAAACCGG 59.571 38.462 0.00 0.00 37.37 5.28
217 218 6.429078 GTGAGTCTATTTTAAGGAAAACCGGT 59.571 38.462 0.00 0.00 37.37 5.28
218 219 6.428771 TGAGTCTATTTTAAGGAAAACCGGTG 59.571 38.462 8.52 0.00 37.37 4.94
219 220 5.708697 AGTCTATTTTAAGGAAAACCGGTGG 59.291 40.000 8.52 0.00 37.37 4.61
220 221 5.706833 GTCTATTTTAAGGAAAACCGGTGGA 59.293 40.000 8.52 0.00 37.37 4.02
221 222 6.207221 GTCTATTTTAAGGAAAACCGGTGGAA 59.793 38.462 8.52 0.00 37.37 3.53
222 223 4.922471 TTTTAAGGAAAACCGGTGGAAG 57.078 40.909 8.52 0.00 29.38 3.46
223 224 3.860968 TTAAGGAAAACCGGTGGAAGA 57.139 42.857 8.52 0.00 0.00 2.87
224 225 2.740506 AAGGAAAACCGGTGGAAGAA 57.259 45.000 8.52 0.00 0.00 2.52
225 226 2.740506 AGGAAAACCGGTGGAAGAAA 57.259 45.000 8.52 0.00 0.00 2.52
226 227 3.021177 AGGAAAACCGGTGGAAGAAAA 57.979 42.857 8.52 0.00 0.00 2.29
227 228 3.367321 AGGAAAACCGGTGGAAGAAAAA 58.633 40.909 8.52 0.00 0.00 1.94
268 269 6.709018 AAAATGAAACGGAAGAAAGGAAGA 57.291 33.333 0.00 0.00 0.00 2.87
269 270 5.948992 AATGAAACGGAAGAAAGGAAGAG 57.051 39.130 0.00 0.00 0.00 2.85
270 271 4.417426 TGAAACGGAAGAAAGGAAGAGT 57.583 40.909 0.00 0.00 0.00 3.24
271 272 4.127171 TGAAACGGAAGAAAGGAAGAGTG 58.873 43.478 0.00 0.00 0.00 3.51
272 273 4.141801 TGAAACGGAAGAAAGGAAGAGTGA 60.142 41.667 0.00 0.00 0.00 3.41
273 274 4.417426 AACGGAAGAAAGGAAGAGTGAA 57.583 40.909 0.00 0.00 0.00 3.18
274 275 4.625607 ACGGAAGAAAGGAAGAGTGAAT 57.374 40.909 0.00 0.00 0.00 2.57
275 276 4.319177 ACGGAAGAAAGGAAGAGTGAATG 58.681 43.478 0.00 0.00 0.00 2.67
276 277 4.202367 ACGGAAGAAAGGAAGAGTGAATGT 60.202 41.667 0.00 0.00 0.00 2.71
277 278 5.011738 ACGGAAGAAAGGAAGAGTGAATGTA 59.988 40.000 0.00 0.00 0.00 2.29
278 279 6.109359 CGGAAGAAAGGAAGAGTGAATGTAT 58.891 40.000 0.00 0.00 0.00 2.29
279 280 7.093465 ACGGAAGAAAGGAAGAGTGAATGTATA 60.093 37.037 0.00 0.00 0.00 1.47
280 281 7.928706 CGGAAGAAAGGAAGAGTGAATGTATAT 59.071 37.037 0.00 0.00 0.00 0.86
281 282 9.050601 GGAAGAAAGGAAGAGTGAATGTATATG 57.949 37.037 0.00 0.00 0.00 1.78
282 283 8.970859 AAGAAAGGAAGAGTGAATGTATATGG 57.029 34.615 0.00 0.00 0.00 2.74
283 284 8.324191 AGAAAGGAAGAGTGAATGTATATGGA 57.676 34.615 0.00 0.00 0.00 3.41
284 285 8.428063 AGAAAGGAAGAGTGAATGTATATGGAG 58.572 37.037 0.00 0.00 0.00 3.86
285 286 7.921041 AAGGAAGAGTGAATGTATATGGAGA 57.079 36.000 0.00 0.00 0.00 3.71
286 287 7.537596 AGGAAGAGTGAATGTATATGGAGAG 57.462 40.000 0.00 0.00 0.00 3.20
287 288 6.496565 AGGAAGAGTGAATGTATATGGAGAGG 59.503 42.308 0.00 0.00 0.00 3.69
288 289 6.268847 GGAAGAGTGAATGTATATGGAGAGGT 59.731 42.308 0.00 0.00 0.00 3.85
289 290 7.202047 GGAAGAGTGAATGTATATGGAGAGGTT 60.202 40.741 0.00 0.00 0.00 3.50
290 291 7.060383 AGAGTGAATGTATATGGAGAGGTTG 57.940 40.000 0.00 0.00 0.00 3.77
291 292 6.042552 AGAGTGAATGTATATGGAGAGGTTGG 59.957 42.308 0.00 0.00 0.00 3.77
292 293 4.757149 GTGAATGTATATGGAGAGGTTGGC 59.243 45.833 0.00 0.00 0.00 4.52
293 294 4.202461 TGAATGTATATGGAGAGGTTGGCC 60.202 45.833 0.00 0.00 0.00 5.36
294 295 1.691976 TGTATATGGAGAGGTTGGCCG 59.308 52.381 0.00 0.00 40.50 6.13
295 296 1.968493 GTATATGGAGAGGTTGGCCGA 59.032 52.381 0.00 0.00 40.50 5.54
296 297 1.507140 ATATGGAGAGGTTGGCCGAA 58.493 50.000 0.00 0.00 40.50 4.30
297 298 0.830648 TATGGAGAGGTTGGCCGAAG 59.169 55.000 0.00 0.00 40.50 3.79
313 314 3.838244 CGAAGGGAAATGGATGGTAGA 57.162 47.619 0.00 0.00 0.00 2.59
353 354 7.726216 ACTCAACTGAAATCGATGGTCATATA 58.274 34.615 11.36 0.49 0.00 0.86
354 355 7.653713 ACTCAACTGAAATCGATGGTCATATAC 59.346 37.037 11.36 0.00 0.00 1.47
356 357 7.438160 TCAACTGAAATCGATGGTCATATACAC 59.562 37.037 11.36 0.00 0.00 2.90
357 358 6.223852 ACTGAAATCGATGGTCATATACACC 58.776 40.000 11.36 0.00 0.00 4.16
359 360 6.826668 TGAAATCGATGGTCATATACACCTT 58.173 36.000 0.00 0.00 34.66 3.50
360 361 7.958088 TGAAATCGATGGTCATATACACCTTA 58.042 34.615 0.00 0.00 34.66 2.69
379 385 6.777580 CACCTTAAAATAAGGGATGCCATACT 59.222 38.462 17.91 0.00 41.71 2.12
390 396 0.463654 TGCCATACTCCGCAACATCC 60.464 55.000 0.00 0.00 30.46 3.51
478 494 1.489649 AGGGCCATCTCACATCTGAAG 59.510 52.381 6.18 0.00 0.00 3.02
479 495 1.476471 GGGCCATCTCACATCTGAAGG 60.476 57.143 4.39 0.00 0.00 3.46
480 496 1.307097 GCCATCTCACATCTGAAGGC 58.693 55.000 0.00 0.00 33.95 4.35
481 497 1.134159 GCCATCTCACATCTGAAGGCT 60.134 52.381 0.00 0.00 36.59 4.58
482 498 2.562635 CCATCTCACATCTGAAGGCTG 58.437 52.381 0.00 0.00 0.00 4.85
483 499 1.941294 CATCTCACATCTGAAGGCTGC 59.059 52.381 0.00 0.00 0.00 5.25
484 500 0.978907 TCTCACATCTGAAGGCTGCA 59.021 50.000 0.50 0.00 0.00 4.41
485 501 1.348696 TCTCACATCTGAAGGCTGCAA 59.651 47.619 0.50 0.00 0.00 4.08
486 502 2.156917 CTCACATCTGAAGGCTGCAAA 58.843 47.619 0.50 0.00 0.00 3.68
607 651 0.597637 GTCCCTCGTATGGCATGTCG 60.598 60.000 10.98 14.53 0.00 4.35
609 653 1.068083 CCTCGTATGGCATGTCGCT 59.932 57.895 10.98 0.00 41.91 4.93
698 993 6.440647 AGTCAAAGAACAGACCCATACATAGA 59.559 38.462 0.00 0.00 35.38 1.98
701 996 8.328758 TCAAAGAACAGACCCATACATAGAAAT 58.671 33.333 0.00 0.00 0.00 2.17
702 997 8.400947 CAAAGAACAGACCCATACATAGAAATG 58.599 37.037 0.00 0.00 39.17 2.32
909 1205 0.188587 TCAGTCCACACCTGTCCTCT 59.811 55.000 0.00 0.00 0.00 3.69
1093 1572 1.990060 GCAGCCTGTCCCTGTCCTA 60.990 63.158 0.00 0.00 32.93 2.94
1096 1575 2.368011 GCCTGTCCCTGTCCTACCC 61.368 68.421 0.00 0.00 0.00 3.69
1103 1582 1.205055 CCCTGTCCTACCCTTTCTCC 58.795 60.000 0.00 0.00 0.00 3.71
1115 1603 1.691163 CCTTTCTCCCTCTCTCTCCCC 60.691 61.905 0.00 0.00 0.00 4.81
1132 1620 2.325082 CCCCGCCTCTCGTTGTTTG 61.325 63.158 0.00 0.00 36.19 2.93
1191 1679 1.091771 CGCATCTGGATTTGTCGGCT 61.092 55.000 0.00 0.00 0.00 5.52
1220 1708 1.266989 CGTCTGGGTTTTGAGCTTTCC 59.733 52.381 0.00 0.00 0.00 3.13
1221 1709 1.613925 GTCTGGGTTTTGAGCTTTCCC 59.386 52.381 0.00 0.00 38.68 3.97
1289 1780 2.384828 GGAGGGTGCGGGATTTAATTT 58.615 47.619 0.00 0.00 0.00 1.82
1322 1814 0.456312 CTGTACTCGTCTTGCCGTCC 60.456 60.000 0.00 0.00 0.00 4.79
1408 1901 8.487313 GAGGCATCGATCTCGTCTATATATAT 57.513 38.462 0.00 0.00 40.80 0.86
1416 1909 5.677567 TCTCGTCTATATATATGGTGCGGA 58.322 41.667 17.73 13.51 0.00 5.54
1496 1989 2.740714 GCCTCTGCGTTTGGCTACG 61.741 63.158 8.09 8.09 43.05 3.51
1528 2080 4.995124 TCGTATCAGGAAGAAACAGCTAC 58.005 43.478 0.00 0.00 0.00 3.58
1531 2083 6.376299 TCGTATCAGGAAGAAACAGCTACTAA 59.624 38.462 0.00 0.00 0.00 2.24
1541 2252 1.205893 ACAGCTACTAAGACTGCCTGC 59.794 52.381 0.00 0.00 33.04 4.85
1548 2259 3.142174 ACTAAGACTGCCTGCTTGTTTC 58.858 45.455 0.00 0.00 0.00 2.78
1561 2272 3.673746 CTTGTTTCAGACGACAAGCAA 57.326 42.857 11.19 0.00 44.14 3.91
1594 2305 5.355596 TCTTTGCAAAAATCGTCCATGTTT 58.644 33.333 13.84 0.00 0.00 2.83
1596 2307 5.401033 TTGCAAAAATCGTCCATGTTTTG 57.599 34.783 0.00 10.86 41.64 2.44
1625 2336 1.048601 AACGTGATCTGAGGTGGTGT 58.951 50.000 0.00 0.00 0.00 4.16
1688 2399 7.060600 TCAGATTACGAGCAGTACAAATTTG 57.939 36.000 16.67 16.67 34.56 2.32
1694 2405 3.120199 CGAGCAGTACAAATTTGACTGGG 60.120 47.826 30.40 18.59 37.09 4.45
1696 2407 4.469657 AGCAGTACAAATTTGACTGGGAA 58.530 39.130 30.40 9.73 37.09 3.97
1698 2409 4.037446 GCAGTACAAATTTGACTGGGAACA 59.963 41.667 30.40 7.80 37.09 3.18
1709 2420 1.377202 TGGGAACAGGAGATTGCGC 60.377 57.895 0.00 0.00 35.01 6.09
1711 2422 1.741770 GGAACAGGAGATTGCGCGT 60.742 57.895 8.43 0.00 0.00 6.01
1729 2440 1.153647 TAGGCGACCGTGCATCAAG 60.154 57.895 0.00 0.00 36.28 3.02
1767 2478 5.175859 CGAATTAGTGAGGTTGTGGTGTAT 58.824 41.667 0.00 0.00 0.00 2.29
1771 2482 4.706842 AGTGAGGTTGTGGTGTATTTCT 57.293 40.909 0.00 0.00 0.00 2.52
1772 2483 5.818678 AGTGAGGTTGTGGTGTATTTCTA 57.181 39.130 0.00 0.00 0.00 2.10
1773 2484 6.374417 AGTGAGGTTGTGGTGTATTTCTAT 57.626 37.500 0.00 0.00 0.00 1.98
1774 2485 7.490657 AGTGAGGTTGTGGTGTATTTCTATA 57.509 36.000 0.00 0.00 0.00 1.31
1775 2486 7.328737 AGTGAGGTTGTGGTGTATTTCTATAC 58.671 38.462 0.00 0.00 37.68 1.47
1822 2627 6.486993 TGCAGTATACAATGTTACACACCAAA 59.513 34.615 5.50 0.00 0.00 3.28
1901 2718 8.883168 CAATTTTTCTTTTCTCGAACTTACTCG 58.117 33.333 0.00 0.00 40.25 4.18
2091 2914 6.515272 TTTTTCAATAAGGAGCTCACATCC 57.485 37.500 17.19 0.00 37.07 3.51
2092 2915 3.845781 TCAATAAGGAGCTCACATCCC 57.154 47.619 17.19 0.00 37.57 3.85
2093 2916 2.439507 TCAATAAGGAGCTCACATCCCC 59.560 50.000 17.19 0.00 37.57 4.81
2094 2917 1.439543 ATAAGGAGCTCACATCCCCC 58.560 55.000 17.19 0.00 37.57 5.40
2145 2968 9.793259 TGAAACTGATAATTATATGAAGGACCC 57.207 33.333 0.00 0.00 0.00 4.46
2156 2979 2.676748 TGAAGGACCCAATTTGCAAGT 58.323 42.857 0.00 0.00 0.00 3.16
2157 2980 3.037549 TGAAGGACCCAATTTGCAAGTT 58.962 40.909 0.65 0.65 0.00 2.66
2158 2981 3.454082 TGAAGGACCCAATTTGCAAGTTT 59.546 39.130 4.19 0.00 0.00 2.66
2159 2982 3.751479 AGGACCCAATTTGCAAGTTTC 57.249 42.857 4.19 0.64 0.00 2.78
2277 3137 9.442047 CTGGAATTCAGAAGATAAAGTAACACT 57.558 33.333 7.93 0.00 46.18 3.55
2302 3162 5.983118 CGTGGTTCTAAAAATGAGCCTTTTT 59.017 36.000 7.05 7.05 40.45 1.94
2503 3459 6.352016 TCTTAATCTATGCCATCTGGAGAC 57.648 41.667 0.00 0.00 37.39 3.36
2637 3597 9.471702 AAGTTCATTTCTGTCATTTGGATATCT 57.528 29.630 2.05 0.00 0.00 1.98
2640 3600 8.908786 TCATTTCTGTCATTTGGATATCTACC 57.091 34.615 2.05 0.00 0.00 3.18
2641 3601 8.493607 TCATTTCTGTCATTTGGATATCTACCA 58.506 33.333 2.05 0.00 35.47 3.25
2642 3602 8.562892 CATTTCTGTCATTTGGATATCTACCAC 58.437 37.037 2.05 0.00 37.13 4.16
2643 3603 7.437713 TTCTGTCATTTGGATATCTACCACT 57.562 36.000 2.05 0.00 37.13 4.00
2644 3604 7.055667 TCTGTCATTTGGATATCTACCACTC 57.944 40.000 2.05 0.00 37.13 3.51
2645 3605 6.841229 TCTGTCATTTGGATATCTACCACTCT 59.159 38.462 2.05 0.00 37.13 3.24
2646 3606 7.345653 TCTGTCATTTGGATATCTACCACTCTT 59.654 37.037 2.05 0.00 37.13 2.85
2647 3607 8.547481 TGTCATTTGGATATCTACCACTCTTA 57.453 34.615 2.05 0.00 37.13 2.10
2648 3608 9.159254 TGTCATTTGGATATCTACCACTCTTAT 57.841 33.333 2.05 0.00 37.13 1.73
2673 3633 3.861341 CCGAGTTGGTGATGATGGT 57.139 52.632 0.00 0.00 0.00 3.55
2674 3634 1.372582 CCGAGTTGGTGATGATGGTG 58.627 55.000 0.00 0.00 0.00 4.17
2675 3635 1.339055 CCGAGTTGGTGATGATGGTGT 60.339 52.381 0.00 0.00 0.00 4.16
2676 3636 1.733912 CGAGTTGGTGATGATGGTGTG 59.266 52.381 0.00 0.00 0.00 3.82
2677 3637 1.470098 GAGTTGGTGATGATGGTGTGC 59.530 52.381 0.00 0.00 0.00 4.57
2678 3638 0.527565 GTTGGTGATGATGGTGTGCC 59.472 55.000 0.00 0.00 0.00 5.01
2679 3639 0.405198 TTGGTGATGATGGTGTGCCT 59.595 50.000 0.00 0.00 35.27 4.75
2680 3640 0.322726 TGGTGATGATGGTGTGCCTG 60.323 55.000 0.00 0.00 35.27 4.85
2681 3641 1.660560 GGTGATGATGGTGTGCCTGC 61.661 60.000 0.00 0.00 35.27 4.85
2682 3642 1.378911 TGATGATGGTGTGCCTGCC 60.379 57.895 0.00 0.00 35.27 4.85
2683 3643 1.378911 GATGATGGTGTGCCTGCCA 60.379 57.895 0.00 0.00 39.33 4.92
2686 3646 3.093555 ATGGTGTGCCTGCCATCT 58.906 55.556 0.00 0.00 41.24 2.90
2687 3647 1.385368 ATGGTGTGCCTGCCATCTT 59.615 52.632 0.00 0.00 41.24 2.40
2688 3648 0.968901 ATGGTGTGCCTGCCATCTTG 60.969 55.000 0.00 0.00 41.24 3.02
2689 3649 1.604593 GGTGTGCCTGCCATCTTGT 60.605 57.895 0.00 0.00 0.00 3.16
2690 3650 0.322456 GGTGTGCCTGCCATCTTGTA 60.322 55.000 0.00 0.00 0.00 2.41
2691 3651 1.533625 GTGTGCCTGCCATCTTGTAA 58.466 50.000 0.00 0.00 0.00 2.41
2692 3652 2.094675 GTGTGCCTGCCATCTTGTAAT 58.905 47.619 0.00 0.00 0.00 1.89
2693 3653 3.278574 GTGTGCCTGCCATCTTGTAATA 58.721 45.455 0.00 0.00 0.00 0.98
2694 3654 3.885297 GTGTGCCTGCCATCTTGTAATAT 59.115 43.478 0.00 0.00 0.00 1.28
2695 3655 5.063204 GTGTGCCTGCCATCTTGTAATATA 58.937 41.667 0.00 0.00 0.00 0.86
2696 3656 5.180117 GTGTGCCTGCCATCTTGTAATATAG 59.820 44.000 0.00 0.00 0.00 1.31
2697 3657 5.071653 TGTGCCTGCCATCTTGTAATATAGA 59.928 40.000 0.00 0.00 0.00 1.98
2698 3658 5.409826 GTGCCTGCCATCTTGTAATATAGAC 59.590 44.000 0.00 0.00 0.00 2.59
2699 3659 4.938226 GCCTGCCATCTTGTAATATAGACC 59.062 45.833 0.00 0.00 0.00 3.85
2700 3660 5.171476 CCTGCCATCTTGTAATATAGACCG 58.829 45.833 0.00 0.00 0.00 4.79
2701 3661 5.279506 CCTGCCATCTTGTAATATAGACCGT 60.280 44.000 0.00 0.00 0.00 4.83
2702 3662 5.779922 TGCCATCTTGTAATATAGACCGTC 58.220 41.667 0.00 0.00 0.00 4.79
2703 3663 5.169295 GCCATCTTGTAATATAGACCGTCC 58.831 45.833 0.00 0.00 0.00 4.79
2704 3664 5.399858 CCATCTTGTAATATAGACCGTCCG 58.600 45.833 0.00 0.00 0.00 4.79
2705 3665 5.182570 CCATCTTGTAATATAGACCGTCCGA 59.817 44.000 0.00 0.00 0.00 4.55
2706 3666 6.127703 CCATCTTGTAATATAGACCGTCCGAT 60.128 42.308 0.00 0.00 0.00 4.18
2707 3667 6.492007 TCTTGTAATATAGACCGTCCGATC 57.508 41.667 0.00 0.00 0.00 3.69
2708 3668 6.236409 TCTTGTAATATAGACCGTCCGATCT 58.764 40.000 0.00 0.00 0.00 2.75
2709 3669 7.389232 TCTTGTAATATAGACCGTCCGATCTA 58.611 38.462 0.00 0.00 32.11 1.98
2710 3670 8.045507 TCTTGTAATATAGACCGTCCGATCTAT 58.954 37.037 8.53 8.53 40.47 1.98
2711 3671 9.322773 CTTGTAATATAGACCGTCCGATCTATA 57.677 37.037 12.02 12.02 42.05 1.31
2712 3672 9.842775 TTGTAATATAGACCGTCCGATCTATAT 57.157 33.333 14.93 14.93 46.24 0.86
2713 3673 9.486497 TGTAATATAGACCGTCCGATCTATATC 57.514 37.037 19.07 11.25 44.71 1.63
2714 3674 9.709495 GTAATATAGACCGTCCGATCTATATCT 57.291 37.037 19.07 13.40 44.71 1.98
2717 3677 9.709495 ATATAGACCGTCCGATCTATATCTAAC 57.291 37.037 14.93 0.00 43.17 2.34
2718 3678 4.869297 AGACCGTCCGATCTATATCTAACG 59.131 45.833 0.00 5.63 37.40 3.18
2719 3679 4.533225 CCGTCCGATCTATATCTAACGG 57.467 50.000 13.15 13.15 44.34 4.44
2727 3687 9.327628 TCCGATCTATATCTAACGGATAGAAAG 57.672 37.037 0.00 0.00 43.73 2.62
2728 3688 8.071368 CCGATCTATATCTAACGGATAGAAAGC 58.929 40.741 0.00 0.00 43.73 3.51
2729 3689 8.613482 CGATCTATATCTAACGGATAGAAAGCA 58.387 37.037 0.00 0.00 43.73 3.91
2732 3692 9.909644 TCTATATCTAACGGATAGAAAGCAAAC 57.090 33.333 0.00 0.00 43.73 2.93
2733 3693 9.915629 CTATATCTAACGGATAGAAAGCAAACT 57.084 33.333 0.00 0.00 43.73 2.66
2736 3696 8.594881 ATCTAACGGATAGAAAGCAAACTATG 57.405 34.615 0.00 0.00 43.73 2.23
2737 3697 7.778083 TCTAACGGATAGAAAGCAAACTATGA 58.222 34.615 0.00 0.00 37.70 2.15
2738 3698 6.663944 AACGGATAGAAAGCAAACTATGAC 57.336 37.500 0.00 0.00 30.74 3.06
2739 3699 5.730550 ACGGATAGAAAGCAAACTATGACA 58.269 37.500 0.00 0.00 30.74 3.58
2740 3700 6.170506 ACGGATAGAAAGCAAACTATGACAA 58.829 36.000 0.00 0.00 30.74 3.18
2741 3701 6.823689 ACGGATAGAAAGCAAACTATGACAAT 59.176 34.615 0.00 0.00 30.74 2.71
2742 3702 7.336931 ACGGATAGAAAGCAAACTATGACAATT 59.663 33.333 0.00 0.00 30.74 2.32
2743 3703 8.184192 CGGATAGAAAGCAAACTATGACAATTT 58.816 33.333 0.00 0.00 30.74 1.82
2744 3704 9.860898 GGATAGAAAGCAAACTATGACAATTTT 57.139 29.630 0.00 0.00 30.74 1.82
2758 3718 9.716507 CTATGACAATTTTACAAAAGATACCCG 57.283 33.333 0.00 0.00 0.00 5.28
2759 3719 6.383415 TGACAATTTTACAAAAGATACCCGC 58.617 36.000 0.00 0.00 0.00 6.13
2760 3720 6.016192 TGACAATTTTACAAAAGATACCCGCA 60.016 34.615 0.00 0.00 0.00 5.69
2761 3721 6.153756 ACAATTTTACAAAAGATACCCGCAC 58.846 36.000 0.00 0.00 0.00 5.34
2762 3722 4.769859 TTTTACAAAAGATACCCGCACC 57.230 40.909 0.00 0.00 0.00 5.01
2763 3723 3.706600 TTACAAAAGATACCCGCACCT 57.293 42.857 0.00 0.00 0.00 4.00
2764 3724 2.109425 ACAAAAGATACCCGCACCTC 57.891 50.000 0.00 0.00 0.00 3.85
2765 3725 1.628846 ACAAAAGATACCCGCACCTCT 59.371 47.619 0.00 0.00 0.00 3.69
2766 3726 2.280628 CAAAAGATACCCGCACCTCTC 58.719 52.381 0.00 0.00 0.00 3.20
2767 3727 1.867363 AAAGATACCCGCACCTCTCT 58.133 50.000 0.00 0.00 0.00 3.10
2768 3728 1.404843 AAGATACCCGCACCTCTCTC 58.595 55.000 0.00 0.00 0.00 3.20
2769 3729 0.468400 AGATACCCGCACCTCTCTCC 60.468 60.000 0.00 0.00 0.00 3.71
2770 3730 0.755698 GATACCCGCACCTCTCTCCA 60.756 60.000 0.00 0.00 0.00 3.86
2771 3731 1.043673 ATACCCGCACCTCTCTCCAC 61.044 60.000 0.00 0.00 0.00 4.02
2772 3732 2.435120 TACCCGCACCTCTCTCCACA 62.435 60.000 0.00 0.00 0.00 4.17
2773 3733 2.362369 CCCGCACCTCTCTCCACAT 61.362 63.158 0.00 0.00 0.00 3.21
2774 3734 1.599047 CCGCACCTCTCTCCACATT 59.401 57.895 0.00 0.00 0.00 2.71
2775 3735 0.036010 CCGCACCTCTCTCCACATTT 60.036 55.000 0.00 0.00 0.00 2.32
2776 3736 1.207089 CCGCACCTCTCTCCACATTTA 59.793 52.381 0.00 0.00 0.00 1.40
2777 3737 2.271800 CGCACCTCTCTCCACATTTAC 58.728 52.381 0.00 0.00 0.00 2.01
2778 3738 2.353704 CGCACCTCTCTCCACATTTACA 60.354 50.000 0.00 0.00 0.00 2.41
2779 3739 3.265791 GCACCTCTCTCCACATTTACAG 58.734 50.000 0.00 0.00 0.00 2.74
2780 3740 3.055819 GCACCTCTCTCCACATTTACAGA 60.056 47.826 0.00 0.00 0.00 3.41
2781 3741 4.383552 GCACCTCTCTCCACATTTACAGAT 60.384 45.833 0.00 0.00 0.00 2.90
2782 3742 5.163405 GCACCTCTCTCCACATTTACAGATA 60.163 44.000 0.00 0.00 0.00 1.98
2783 3743 6.630413 GCACCTCTCTCCACATTTACAGATAA 60.630 42.308 0.00 0.00 0.00 1.75
2784 3744 6.983307 CACCTCTCTCCACATTTACAGATAAG 59.017 42.308 0.00 0.00 0.00 1.73
2785 3745 6.098982 ACCTCTCTCCACATTTACAGATAAGG 59.901 42.308 0.00 0.00 0.00 2.69
2786 3746 5.918608 TCTCTCCACATTTACAGATAAGGC 58.081 41.667 0.00 0.00 0.00 4.35
2787 3747 5.036117 TCTCCACATTTACAGATAAGGCC 57.964 43.478 0.00 0.00 0.00 5.19
2788 3748 4.721776 TCTCCACATTTACAGATAAGGCCT 59.278 41.667 0.00 0.00 0.00 5.19
2789 3749 5.191722 TCTCCACATTTACAGATAAGGCCTT 59.808 40.000 24.18 24.18 0.00 4.35
2790 3750 5.192927 TCCACATTTACAGATAAGGCCTTG 58.807 41.667 28.77 14.69 0.00 3.61
2791 3751 4.202050 CCACATTTACAGATAAGGCCTTGC 60.202 45.833 28.77 19.04 0.00 4.01
2801 3761 3.502572 GGCCTTGCCTCGTTCATC 58.497 61.111 0.00 0.00 46.69 2.92
2802 3762 2.115291 GGCCTTGCCTCGTTCATCC 61.115 63.158 0.00 0.00 46.69 3.51
2803 3763 1.078143 GCCTTGCCTCGTTCATCCT 60.078 57.895 0.00 0.00 0.00 3.24
2804 3764 0.678048 GCCTTGCCTCGTTCATCCTT 60.678 55.000 0.00 0.00 0.00 3.36
2805 3765 1.406887 GCCTTGCCTCGTTCATCCTTA 60.407 52.381 0.00 0.00 0.00 2.69
2806 3766 2.746472 GCCTTGCCTCGTTCATCCTTAT 60.746 50.000 0.00 0.00 0.00 1.73
2807 3767 3.134458 CCTTGCCTCGTTCATCCTTATC 58.866 50.000 0.00 0.00 0.00 1.75
2808 3768 3.181461 CCTTGCCTCGTTCATCCTTATCT 60.181 47.826 0.00 0.00 0.00 1.98
2809 3769 3.735237 TGCCTCGTTCATCCTTATCTC 57.265 47.619 0.00 0.00 0.00 2.75
2810 3770 2.365617 TGCCTCGTTCATCCTTATCTCC 59.634 50.000 0.00 0.00 0.00 3.71
2811 3771 2.289133 GCCTCGTTCATCCTTATCTCCC 60.289 54.545 0.00 0.00 0.00 4.30
2812 3772 2.965831 CCTCGTTCATCCTTATCTCCCA 59.034 50.000 0.00 0.00 0.00 4.37
2813 3773 3.243907 CCTCGTTCATCCTTATCTCCCAC 60.244 52.174 0.00 0.00 0.00 4.61
2814 3774 3.371034 TCGTTCATCCTTATCTCCCACA 58.629 45.455 0.00 0.00 0.00 4.17
2815 3775 3.772572 TCGTTCATCCTTATCTCCCACAA 59.227 43.478 0.00 0.00 0.00 3.33
2816 3776 4.122776 CGTTCATCCTTATCTCCCACAAG 58.877 47.826 0.00 0.00 0.00 3.16
2817 3777 4.141937 CGTTCATCCTTATCTCCCACAAGA 60.142 45.833 0.00 0.00 0.00 3.02
2818 3778 5.453903 CGTTCATCCTTATCTCCCACAAGAT 60.454 44.000 0.00 0.00 39.35 2.40
2819 3779 6.239317 CGTTCATCCTTATCTCCCACAAGATA 60.239 42.308 0.00 0.00 37.24 1.98
2820 3780 7.509546 GTTCATCCTTATCTCCCACAAGATAA 58.490 38.462 6.27 6.27 42.93 1.75
2821 3781 7.690454 TCATCCTTATCTCCCACAAGATAAA 57.310 36.000 7.52 0.00 43.92 1.40
2822 3782 7.509546 TCATCCTTATCTCCCACAAGATAAAC 58.490 38.462 7.52 0.00 43.92 2.01
2823 3783 7.348274 TCATCCTTATCTCCCACAAGATAAACT 59.652 37.037 7.52 0.00 43.92 2.66
2824 3784 8.651389 CATCCTTATCTCCCACAAGATAAACTA 58.349 37.037 7.52 0.00 43.92 2.24
2825 3785 8.019656 TCCTTATCTCCCACAAGATAAACTAC 57.980 38.462 7.52 0.00 43.92 2.73
2826 3786 7.844779 TCCTTATCTCCCACAAGATAAACTACT 59.155 37.037 7.52 0.00 43.92 2.57
2827 3787 8.145122 CCTTATCTCCCACAAGATAAACTACTC 58.855 40.741 7.52 0.00 43.92 2.59
2828 3788 8.603898 TTATCTCCCACAAGATAAACTACTCA 57.396 34.615 4.33 0.00 42.47 3.41
2829 3789 7.682787 ATCTCCCACAAGATAAACTACTCAT 57.317 36.000 0.00 0.00 34.21 2.90
2830 3790 8.783660 ATCTCCCACAAGATAAACTACTCATA 57.216 34.615 0.00 0.00 34.21 2.15
2831 3791 8.008513 TCTCCCACAAGATAAACTACTCATAC 57.991 38.462 0.00 0.00 0.00 2.39
2832 3792 7.618117 TCTCCCACAAGATAAACTACTCATACA 59.382 37.037 0.00 0.00 0.00 2.29
2833 3793 8.141298 TCCCACAAGATAAACTACTCATACAA 57.859 34.615 0.00 0.00 0.00 2.41
2834 3794 8.598916 TCCCACAAGATAAACTACTCATACAAA 58.401 33.333 0.00 0.00 0.00 2.83
2835 3795 9.396022 CCCACAAGATAAACTACTCATACAAAT 57.604 33.333 0.00 0.00 0.00 2.32
2837 3797 9.708222 CACAAGATAAACTACTCATACAAATGC 57.292 33.333 0.00 0.00 32.76 3.56
2838 3798 9.448438 ACAAGATAAACTACTCATACAAATGCA 57.552 29.630 0.00 0.00 32.76 3.96
2844 3804 8.565896 AAACTACTCATACAAATGCATCTTGA 57.434 30.769 20.96 10.81 32.76 3.02
2845 3805 8.743085 AACTACTCATACAAATGCATCTTGAT 57.257 30.769 20.96 11.48 32.76 2.57
2846 3806 8.151141 ACTACTCATACAAATGCATCTTGATG 57.849 34.615 20.96 18.39 32.76 3.07
2847 3807 7.772292 ACTACTCATACAAATGCATCTTGATGT 59.228 33.333 20.96 14.21 32.76 3.06
2848 3808 6.792326 ACTCATACAAATGCATCTTGATGTG 58.208 36.000 20.96 19.34 32.76 3.21
2849 3809 5.584442 TCATACAAATGCATCTTGATGTGC 58.416 37.500 20.96 1.47 41.61 4.57
2850 3810 3.241067 ACAAATGCATCTTGATGTGCC 57.759 42.857 20.96 0.00 40.56 5.01
2851 3811 2.190161 CAAATGCATCTTGATGTGCCG 58.810 47.619 0.00 0.00 40.56 5.69
2852 3812 1.466856 AATGCATCTTGATGTGCCGT 58.533 45.000 0.00 0.00 40.56 5.68
2853 3813 0.736636 ATGCATCTTGATGTGCCGTG 59.263 50.000 11.61 0.00 40.56 4.94
2854 3814 1.226491 GCATCTTGATGTGCCGTGC 60.226 57.895 11.61 0.00 35.35 5.34
2855 3815 1.925415 GCATCTTGATGTGCCGTGCA 61.925 55.000 11.61 0.00 35.35 4.57
2856 3816 0.522626 CATCTTGATGTGCCGTGCAA 59.477 50.000 0.00 0.00 41.47 4.08
2857 3817 0.523072 ATCTTGATGTGCCGTGCAAC 59.477 50.000 0.00 0.00 41.47 4.17
2868 3828 2.202650 GTGCAACGCATGGGCATC 60.203 61.111 10.10 0.00 41.91 3.91
2869 3829 2.361483 TGCAACGCATGGGCATCT 60.361 55.556 10.10 0.00 41.24 2.90
2870 3830 1.978080 TGCAACGCATGGGCATCTT 60.978 52.632 10.10 0.00 41.24 2.40
2871 3831 1.517694 GCAACGCATGGGCATCTTG 60.518 57.895 10.10 7.97 41.24 3.02
2872 3832 1.517694 CAACGCATGGGCATCTTGC 60.518 57.895 10.10 6.97 44.08 4.01
2873 3833 1.679977 AACGCATGGGCATCTTGCT 60.680 52.632 10.10 0.00 44.28 3.91
2874 3834 0.394216 AACGCATGGGCATCTTGCTA 60.394 50.000 10.10 0.00 44.28 3.49
2875 3835 0.816825 ACGCATGGGCATCTTGCTAG 60.817 55.000 10.10 0.00 44.28 3.42
2945 3905 5.734855 AATATGACTTGTCATTGTACGGC 57.265 39.130 19.49 0.00 0.00 5.68
2946 3906 2.535012 TGACTTGTCATTGTACGGCA 57.465 45.000 0.00 0.00 0.00 5.69
3066 4026 4.984785 GGTTTGGAGAAGTCTTTCATTTGC 59.015 41.667 0.00 0.00 35.70 3.68
3072 4032 5.689068 GGAGAAGTCTTTCATTTGCAACTTG 59.311 40.000 0.00 0.00 35.70 3.16
3144 4105 4.336713 GGCTTTCAGTGATTGGGTTCTATC 59.663 45.833 0.00 0.00 0.00 2.08
3160 4121 7.894364 TGGGTTCTATCCTATTCTACCTCATAC 59.106 40.741 0.00 0.00 0.00 2.39
3249 4210 4.202284 ACCTGAAACTTACGTTCTTGCCTA 60.202 41.667 0.00 0.00 31.66 3.93
3304 4266 2.073816 GGATGGTGTTTAGGTCACGTG 58.926 52.381 9.94 9.94 36.76 4.49
3484 4446 4.369182 AGTAGAAAAACTGAGTGGTGTCG 58.631 43.478 0.00 0.00 0.00 4.35
3492 4454 2.035576 ACTGAGTGGTGTCGGTTAACTC 59.964 50.000 5.42 0.00 38.18 3.01
3513 4475 7.979786 ACTCTCTGGTCCTTGATTTAAGATA 57.020 36.000 0.00 0.00 38.76 1.98
3532 4494 1.813753 CAACCTACCATGGTCCGCG 60.814 63.158 23.76 9.71 39.83 6.46
3607 4569 8.417106 TGATTTTAACATGGCAAAAGTTAGACA 58.583 29.630 11.04 0.00 0.00 3.41
3608 4570 8.816640 ATTTTAACATGGCAAAAGTTAGACAG 57.183 30.769 11.04 0.00 0.00 3.51
3651 4613 6.790285 AACAAAACAAATCATGGATGAAGC 57.210 33.333 0.00 0.00 40.69 3.86
3654 4616 4.789012 AACAAATCATGGATGAAGCGTT 57.211 36.364 0.00 0.00 40.69 4.84
3660 4622 2.295629 TCATGGATGAAGCGTTTTTGCA 59.704 40.909 0.00 0.00 37.31 4.08
3704 4666 2.498167 AGCTGCTACAGTTTTGTCAGG 58.502 47.619 0.00 0.00 38.76 3.86
3723 4685 7.470289 GTCAGGTTGACTTGTATGATATGAC 57.530 40.000 2.08 0.00 43.73 3.06
3724 4686 7.268586 GTCAGGTTGACTTGTATGATATGACT 58.731 38.462 2.08 0.00 43.73 3.41
3725 4687 7.436673 GTCAGGTTGACTTGTATGATATGACTC 59.563 40.741 2.08 0.00 43.73 3.36
3726 4688 7.124147 TCAGGTTGACTTGTATGATATGACTCA 59.876 37.037 0.00 0.00 0.00 3.41
3772 4734 9.755804 CTTCACATTAATAGCATGAAGAGACTA 57.244 33.333 17.70 0.00 45.96 2.59
3796 4758 5.894298 AACATGTATCCATCTCTGCCTAA 57.106 39.130 0.00 0.00 0.00 2.69
3879 4841 3.451178 AGTTGGTACGACCTATGAAGCAT 59.549 43.478 0.00 0.00 39.58 3.79
3937 4899 2.224646 GCATCCTCCCTTTACCTCATCC 60.225 54.545 0.00 0.00 0.00 3.51
3986 4948 8.344831 CAGTTTGTCAAGTATCTTTTGTGATCA 58.655 33.333 0.00 0.00 0.00 2.92
4199 5162 7.072263 AGGCTATATAGTCAATGTTGCTTCT 57.928 36.000 16.48 0.00 30.28 2.85
4212 5175 5.755409 TGTTGCTTCTATTCCTTACTGGA 57.245 39.130 0.00 0.00 44.51 3.86
4437 5400 6.007703 ACTTATGTATCTGCTACTCCCTCTC 58.992 44.000 0.00 0.00 0.00 3.20
4453 5416 8.840200 ACTCCCTCTCTTCTTACATTTATGTA 57.160 34.615 0.00 0.00 41.97 2.29
4474 5437 6.491383 TGTACAGAGGGAGTACATTCTAACT 58.509 40.000 2.34 0.00 44.86 2.24
4578 5542 2.029288 CCTGCTGTTCATCGTGCGT 61.029 57.895 0.00 0.00 0.00 5.24
4626 5590 2.671351 CGAAGTGGCTGACGTGAAGTAT 60.671 50.000 0.00 0.00 0.00 2.12
4943 5907 3.168035 TGATGGCCACTTTGTATTGGT 57.832 42.857 8.16 0.00 35.09 3.67
4944 5908 3.505386 TGATGGCCACTTTGTATTGGTT 58.495 40.909 8.16 0.00 35.09 3.67
4945 5909 4.667573 TGATGGCCACTTTGTATTGGTTA 58.332 39.130 8.16 0.00 35.09 2.85
5089 6565 8.637281 TGTTATGTTCACCGTATAACACATAG 57.363 34.615 0.00 0.00 40.43 2.23
5106 6587 8.445275 AACACATAGAACTATCAAACAACACA 57.555 30.769 0.00 0.00 0.00 3.72
5107 6588 8.445275 ACACATAGAACTATCAAACAACACAA 57.555 30.769 0.00 0.00 0.00 3.33
5108 6589 8.559536 ACACATAGAACTATCAAACAACACAAG 58.440 33.333 0.00 0.00 0.00 3.16
5109 6590 8.773645 CACATAGAACTATCAAACAACACAAGA 58.226 33.333 0.00 0.00 0.00 3.02
5110 6591 9.507329 ACATAGAACTATCAAACAACACAAGAT 57.493 29.630 0.00 0.00 0.00 2.40
5111 6592 9.979270 CATAGAACTATCAAACAACACAAGATC 57.021 33.333 0.00 0.00 0.00 2.75
5112 6593 9.725019 ATAGAACTATCAAACAACACAAGATCA 57.275 29.630 0.00 0.00 0.00 2.92
5113 6594 8.450578 AGAACTATCAAACAACACAAGATCAA 57.549 30.769 0.00 0.00 0.00 2.57
5114 6595 8.902806 AGAACTATCAAACAACACAAGATCAAA 58.097 29.630 0.00 0.00 0.00 2.69
5115 6596 9.683069 GAACTATCAAACAACACAAGATCAAAT 57.317 29.630 0.00 0.00 0.00 2.32
5116 6597 9.683069 AACTATCAAACAACACAAGATCAAATC 57.317 29.630 0.00 0.00 0.00 2.17
5117 6598 8.849168 ACTATCAAACAACACAAGATCAAATCA 58.151 29.630 0.00 0.00 0.00 2.57
5118 6599 9.681692 CTATCAAACAACACAAGATCAAATCAA 57.318 29.630 0.00 0.00 0.00 2.57
5119 6600 7.990541 TCAAACAACACAAGATCAAATCAAG 57.009 32.000 0.00 0.00 0.00 3.02
5120 6601 6.979817 TCAAACAACACAAGATCAAATCAAGG 59.020 34.615 0.00 0.00 0.00 3.61
5121 6602 6.713762 AACAACACAAGATCAAATCAAGGA 57.286 33.333 0.00 0.00 0.00 3.36
5122 6603 6.713762 ACAACACAAGATCAAATCAAGGAA 57.286 33.333 0.00 0.00 0.00 3.36
5123 6604 7.111247 ACAACACAAGATCAAATCAAGGAAA 57.889 32.000 0.00 0.00 0.00 3.13
5124 6605 7.729116 ACAACACAAGATCAAATCAAGGAAAT 58.271 30.769 0.00 0.00 0.00 2.17
5130 6611 7.548075 ACAAGATCAAATCAAGGAAATGCAATC 59.452 33.333 0.00 0.00 0.00 2.67
5131 6612 7.177832 AGATCAAATCAAGGAAATGCAATCA 57.822 32.000 0.00 0.00 0.00 2.57
5132 6613 7.792032 AGATCAAATCAAGGAAATGCAATCAT 58.208 30.769 0.00 0.00 33.53 2.45
5138 6619 7.649533 ATCAAGGAAATGCAATCATAACAGA 57.350 32.000 0.00 0.00 31.46 3.41
5146 6627 5.300969 TGCAATCATAACAGAAGCAAGAC 57.699 39.130 0.00 0.00 32.21 3.01
5209 6690 4.787598 CAGAAATTCCTTTCAACCACGAG 58.212 43.478 0.00 0.00 42.71 4.18
5226 6707 2.223947 ACGAGAACAAACAAAATGGCCC 60.224 45.455 0.00 0.00 0.00 5.80
5326 6808 2.017049 CCTTTGCTGCTATGGTGTACC 58.983 52.381 0.00 0.00 0.00 3.34
5383 6865 9.507329 AACACTGTATAGTTTCATCACATTTCT 57.493 29.630 0.00 0.00 34.07 2.52
5463 7029 7.601705 ATCCATAATCAATTTTACCAGGTGG 57.398 36.000 0.76 0.00 42.17 4.61
5540 7106 4.590222 ACTGGACTTGATTTGCTGGATTTT 59.410 37.500 0.00 0.00 0.00 1.82
5542 7108 4.168760 GGACTTGATTTGCTGGATTTTCG 58.831 43.478 0.00 0.00 0.00 3.46
5643 7209 8.598041 AGATAAAAGTAGAGAGGAAAGAAGCAA 58.402 33.333 0.00 0.00 0.00 3.91
5644 7210 9.220767 GATAAAAGTAGAGAGGAAAGAAGCAAA 57.779 33.333 0.00 0.00 0.00 3.68
5645 7211 6.869315 AAAGTAGAGAGGAAAGAAGCAAAC 57.131 37.500 0.00 0.00 0.00 2.93
5657 7548 6.295292 GGAAAGAAGCAAACCAACCAATCTAT 60.295 38.462 0.00 0.00 0.00 1.98
5725 7616 6.426980 TTGAGCAAACATGATGTTAGCTAG 57.573 37.500 11.70 1.39 40.14 3.42
5804 7695 2.091555 ACCCAAGGAACCAACTAAGCAA 60.092 45.455 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 9.914131 GACATGCAGTCACAGACTAATATATTA 57.086 33.333 5.10 5.10 46.77 0.98
17 18 8.824159 GACATGCAGTCACAGACTAATATATT 57.176 34.615 2.97 2.97 46.77 1.28
33 34 7.307396 GCATCAACGTAATAATAGACATGCAGT 60.307 37.037 0.00 0.00 34.39 4.40
34 35 7.011773 GCATCAACGTAATAATAGACATGCAG 58.988 38.462 0.00 0.00 34.39 4.41
35 36 6.346518 CGCATCAACGTAATAATAGACATGCA 60.347 38.462 0.00 0.00 33.96 3.96
36 37 6.009474 CGCATCAACGTAATAATAGACATGC 58.991 40.000 0.00 0.00 0.00 4.06
37 38 6.009474 GCGCATCAACGTAATAATAGACATG 58.991 40.000 0.30 0.00 34.88 3.21
38 39 5.926542 AGCGCATCAACGTAATAATAGACAT 59.073 36.000 11.47 0.00 34.88 3.06
39 40 5.286438 AGCGCATCAACGTAATAATAGACA 58.714 37.500 11.47 0.00 34.88 3.41
40 41 5.824243 AGCGCATCAACGTAATAATAGAC 57.176 39.130 11.47 0.00 34.88 2.59
41 42 7.933728 TTTAGCGCATCAACGTAATAATAGA 57.066 32.000 11.47 0.00 34.88 1.98
42 43 9.250986 GATTTTAGCGCATCAACGTAATAATAG 57.749 33.333 11.47 0.00 34.88 1.73
43 44 8.984764 AGATTTTAGCGCATCAACGTAATAATA 58.015 29.630 11.47 0.00 34.88 0.98
44 45 7.861630 AGATTTTAGCGCATCAACGTAATAAT 58.138 30.769 11.47 1.12 34.88 1.28
45 46 7.241663 AGATTTTAGCGCATCAACGTAATAA 57.758 32.000 11.47 0.00 34.88 1.40
46 47 6.838198 AGATTTTAGCGCATCAACGTAATA 57.162 33.333 11.47 0.00 34.88 0.98
47 48 5.734855 AGATTTTAGCGCATCAACGTAAT 57.265 34.783 11.47 0.00 34.88 1.89
48 49 5.539582 AAGATTTTAGCGCATCAACGTAA 57.460 34.783 11.47 0.00 34.88 3.18
49 50 6.268797 CTAAGATTTTAGCGCATCAACGTA 57.731 37.500 11.47 0.00 34.88 3.57
50 51 5.143916 CTAAGATTTTAGCGCATCAACGT 57.856 39.130 11.47 0.00 34.88 3.99
66 67 9.412460 TGATTCCATACAAAAATCTGCTAAGAT 57.588 29.630 0.00 0.00 45.48 2.40
67 68 8.806429 TGATTCCATACAAAAATCTGCTAAGA 57.194 30.769 0.00 0.00 36.69 2.10
68 69 9.674824 GATGATTCCATACAAAAATCTGCTAAG 57.325 33.333 0.00 0.00 32.09 2.18
69 70 9.187996 TGATGATTCCATACAAAAATCTGCTAA 57.812 29.630 0.00 0.00 32.09 3.09
70 71 8.750515 TGATGATTCCATACAAAAATCTGCTA 57.249 30.769 0.00 0.00 32.09 3.49
71 72 7.649533 TGATGATTCCATACAAAAATCTGCT 57.350 32.000 0.00 0.00 32.09 4.24
72 73 8.139350 TCATGATGATTCCATACAAAAATCTGC 58.861 33.333 0.00 0.00 32.09 4.26
84 85 9.755122 ATGACAGATAAATCATGATGATTCCAT 57.245 29.630 19.89 15.63 45.57 3.41
112 113 9.781633 TCTTACCAAATAAGTGCTTAACAGTAA 57.218 29.630 0.00 2.83 41.13 2.24
113 114 9.781633 TTCTTACCAAATAAGTGCTTAACAGTA 57.218 29.630 0.00 0.00 41.13 2.74
114 115 8.685838 TTCTTACCAAATAAGTGCTTAACAGT 57.314 30.769 0.00 0.00 41.13 3.55
120 121 9.643693 CAATGAATTCTTACCAAATAAGTGCTT 57.356 29.630 7.05 0.00 41.13 3.91
121 122 9.023962 TCAATGAATTCTTACCAAATAAGTGCT 57.976 29.630 7.05 0.00 41.13 4.40
122 123 9.076596 GTCAATGAATTCTTACCAAATAAGTGC 57.923 33.333 7.05 0.00 41.13 4.40
133 134 9.959749 TTGTTTGGTAAGTCAATGAATTCTTAC 57.040 29.630 7.05 6.47 40.48 2.34
135 136 9.883142 TTTTGTTTGGTAAGTCAATGAATTCTT 57.117 25.926 7.05 0.00 0.00 2.52
189 190 8.512138 CGGTTTTCCTTAAAATAGACTCACATT 58.488 33.333 0.00 0.00 36.96 2.71
190 191 7.120726 CCGGTTTTCCTTAAAATAGACTCACAT 59.879 37.037 0.00 0.00 36.96 3.21
191 192 6.428771 CCGGTTTTCCTTAAAATAGACTCACA 59.571 38.462 0.00 0.00 36.96 3.58
192 193 6.429078 ACCGGTTTTCCTTAAAATAGACTCAC 59.571 38.462 0.00 0.00 36.96 3.51
193 194 6.428771 CACCGGTTTTCCTTAAAATAGACTCA 59.571 38.462 2.97 0.00 36.96 3.41
194 195 6.128090 CCACCGGTTTTCCTTAAAATAGACTC 60.128 42.308 2.97 0.00 36.96 3.36
195 196 5.708697 CCACCGGTTTTCCTTAAAATAGACT 59.291 40.000 2.97 0.00 36.96 3.24
196 197 5.706833 TCCACCGGTTTTCCTTAAAATAGAC 59.293 40.000 2.97 0.00 36.96 2.59
197 198 5.878627 TCCACCGGTTTTCCTTAAAATAGA 58.121 37.500 2.97 0.00 36.96 1.98
198 199 6.431852 TCTTCCACCGGTTTTCCTTAAAATAG 59.568 38.462 2.97 0.00 36.96 1.73
199 200 6.305411 TCTTCCACCGGTTTTCCTTAAAATA 58.695 36.000 2.97 0.00 36.96 1.40
200 201 5.141910 TCTTCCACCGGTTTTCCTTAAAAT 58.858 37.500 2.97 0.00 36.96 1.82
201 202 4.534797 TCTTCCACCGGTTTTCCTTAAAA 58.465 39.130 2.97 0.00 37.95 1.52
202 203 4.167652 TCTTCCACCGGTTTTCCTTAAA 57.832 40.909 2.97 0.00 37.95 1.52
203 204 3.860968 TCTTCCACCGGTTTTCCTTAA 57.139 42.857 2.97 0.00 37.95 1.85
204 205 3.860968 TTCTTCCACCGGTTTTCCTTA 57.139 42.857 2.97 0.00 37.95 2.69
205 206 2.740506 TTCTTCCACCGGTTTTCCTT 57.259 45.000 2.97 0.00 37.95 3.36
206 207 2.740506 TTTCTTCCACCGGTTTTCCT 57.259 45.000 2.97 0.00 37.95 3.36
207 208 3.804786 TTTTTCTTCCACCGGTTTTCC 57.195 42.857 2.97 0.00 0.00 3.13
244 245 7.107639 TCTTCCTTTCTTCCGTTTCATTTTT 57.892 32.000 0.00 0.00 0.00 1.94
245 246 6.321435 ACTCTTCCTTTCTTCCGTTTCATTTT 59.679 34.615 0.00 0.00 0.00 1.82
246 247 5.828328 ACTCTTCCTTTCTTCCGTTTCATTT 59.172 36.000 0.00 0.00 0.00 2.32
247 248 5.239525 CACTCTTCCTTTCTTCCGTTTCATT 59.760 40.000 0.00 0.00 0.00 2.57
248 249 4.757149 CACTCTTCCTTTCTTCCGTTTCAT 59.243 41.667 0.00 0.00 0.00 2.57
249 250 4.127171 CACTCTTCCTTTCTTCCGTTTCA 58.873 43.478 0.00 0.00 0.00 2.69
250 251 4.377897 TCACTCTTCCTTTCTTCCGTTTC 58.622 43.478 0.00 0.00 0.00 2.78
251 252 4.417426 TCACTCTTCCTTTCTTCCGTTT 57.583 40.909 0.00 0.00 0.00 3.60
252 253 4.417426 TTCACTCTTCCTTTCTTCCGTT 57.583 40.909 0.00 0.00 0.00 4.44
253 254 4.202367 ACATTCACTCTTCCTTTCTTCCGT 60.202 41.667 0.00 0.00 0.00 4.69
254 255 4.319177 ACATTCACTCTTCCTTTCTTCCG 58.681 43.478 0.00 0.00 0.00 4.30
255 256 9.050601 CATATACATTCACTCTTCCTTTCTTCC 57.949 37.037 0.00 0.00 0.00 3.46
256 257 9.050601 CCATATACATTCACTCTTCCTTTCTTC 57.949 37.037 0.00 0.00 0.00 2.87
257 258 8.772250 TCCATATACATTCACTCTTCCTTTCTT 58.228 33.333 0.00 0.00 0.00 2.52
258 259 8.324191 TCCATATACATTCACTCTTCCTTTCT 57.676 34.615 0.00 0.00 0.00 2.52
259 260 8.424918 TCTCCATATACATTCACTCTTCCTTTC 58.575 37.037 0.00 0.00 0.00 2.62
260 261 8.324191 TCTCCATATACATTCACTCTTCCTTT 57.676 34.615 0.00 0.00 0.00 3.11
261 262 7.016072 CCTCTCCATATACATTCACTCTTCCTT 59.984 40.741 0.00 0.00 0.00 3.36
262 263 6.496565 CCTCTCCATATACATTCACTCTTCCT 59.503 42.308 0.00 0.00 0.00 3.36
263 264 6.268847 ACCTCTCCATATACATTCACTCTTCC 59.731 42.308 0.00 0.00 0.00 3.46
264 265 7.296628 ACCTCTCCATATACATTCACTCTTC 57.703 40.000 0.00 0.00 0.00 2.87
265 266 7.419518 CCAACCTCTCCATATACATTCACTCTT 60.420 40.741 0.00 0.00 0.00 2.85
266 267 6.042552 CCAACCTCTCCATATACATTCACTCT 59.957 42.308 0.00 0.00 0.00 3.24
267 268 6.226787 CCAACCTCTCCATATACATTCACTC 58.773 44.000 0.00 0.00 0.00 3.51
268 269 5.455326 GCCAACCTCTCCATATACATTCACT 60.455 44.000 0.00 0.00 0.00 3.41
269 270 4.757149 GCCAACCTCTCCATATACATTCAC 59.243 45.833 0.00 0.00 0.00 3.18
270 271 4.202461 GGCCAACCTCTCCATATACATTCA 60.202 45.833 0.00 0.00 0.00 2.57
271 272 4.327680 GGCCAACCTCTCCATATACATTC 58.672 47.826 0.00 0.00 0.00 2.67
272 273 3.244561 CGGCCAACCTCTCCATATACATT 60.245 47.826 2.24 0.00 0.00 2.71
273 274 2.303022 CGGCCAACCTCTCCATATACAT 59.697 50.000 2.24 0.00 0.00 2.29
274 275 1.691976 CGGCCAACCTCTCCATATACA 59.308 52.381 2.24 0.00 0.00 2.29
275 276 1.968493 TCGGCCAACCTCTCCATATAC 59.032 52.381 2.24 0.00 0.00 1.47
276 277 2.391926 TCGGCCAACCTCTCCATATA 57.608 50.000 2.24 0.00 0.00 0.86
277 278 1.417890 CTTCGGCCAACCTCTCCATAT 59.582 52.381 2.24 0.00 0.00 1.78
278 279 0.830648 CTTCGGCCAACCTCTCCATA 59.169 55.000 2.24 0.00 0.00 2.74
279 280 1.604378 CTTCGGCCAACCTCTCCAT 59.396 57.895 2.24 0.00 0.00 3.41
280 281 2.592993 CCTTCGGCCAACCTCTCCA 61.593 63.158 2.24 0.00 0.00 3.86
281 282 2.269241 CCTTCGGCCAACCTCTCC 59.731 66.667 2.24 0.00 0.00 3.71
282 283 1.838073 TTCCCTTCGGCCAACCTCTC 61.838 60.000 2.24 0.00 0.00 3.20
283 284 1.423794 TTTCCCTTCGGCCAACCTCT 61.424 55.000 2.24 0.00 0.00 3.69
284 285 0.323451 ATTTCCCTTCGGCCAACCTC 60.323 55.000 2.24 0.00 0.00 3.85
285 286 0.611896 CATTTCCCTTCGGCCAACCT 60.612 55.000 2.24 0.00 0.00 3.50
286 287 1.604147 CCATTTCCCTTCGGCCAACC 61.604 60.000 2.24 0.00 0.00 3.77
287 288 0.610785 TCCATTTCCCTTCGGCCAAC 60.611 55.000 2.24 0.00 0.00 3.77
288 289 0.334676 ATCCATTTCCCTTCGGCCAA 59.665 50.000 2.24 0.00 0.00 4.52
289 290 0.395586 CATCCATTTCCCTTCGGCCA 60.396 55.000 2.24 0.00 0.00 5.36
290 291 1.109323 CCATCCATTTCCCTTCGGCC 61.109 60.000 0.00 0.00 0.00 6.13
291 292 0.395724 ACCATCCATTTCCCTTCGGC 60.396 55.000 0.00 0.00 0.00 5.54
292 293 2.438021 TCTACCATCCATTTCCCTTCGG 59.562 50.000 0.00 0.00 0.00 4.30
293 294 3.388024 TCTCTACCATCCATTTCCCTTCG 59.612 47.826 0.00 0.00 0.00 3.79
294 295 5.574970 ATCTCTACCATCCATTTCCCTTC 57.425 43.478 0.00 0.00 0.00 3.46
295 296 6.466470 GCTAATCTCTACCATCCATTTCCCTT 60.466 42.308 0.00 0.00 0.00 3.95
296 297 5.013599 GCTAATCTCTACCATCCATTTCCCT 59.986 44.000 0.00 0.00 0.00 4.20
297 298 5.249420 GCTAATCTCTACCATCCATTTCCC 58.751 45.833 0.00 0.00 0.00 3.97
298 299 5.221925 TGGCTAATCTCTACCATCCATTTCC 60.222 44.000 0.00 0.00 0.00 3.13
299 300 5.869579 TGGCTAATCTCTACCATCCATTTC 58.130 41.667 0.00 0.00 0.00 2.17
300 301 5.912149 TGGCTAATCTCTACCATCCATTT 57.088 39.130 0.00 0.00 0.00 2.32
301 302 6.501805 TGTATGGCTAATCTCTACCATCCATT 59.498 38.462 0.00 0.00 41.93 3.16
302 303 6.025539 TGTATGGCTAATCTCTACCATCCAT 58.974 40.000 0.00 0.00 41.93 3.41
303 304 5.402630 TGTATGGCTAATCTCTACCATCCA 58.597 41.667 0.00 0.00 41.93 3.41
304 305 6.360370 TTGTATGGCTAATCTCTACCATCC 57.640 41.667 0.00 0.00 41.93 3.51
305 306 7.445945 AGTTTGTATGGCTAATCTCTACCATC 58.554 38.462 0.00 0.00 41.93 3.51
306 307 7.071196 TGAGTTTGTATGGCTAATCTCTACCAT 59.929 37.037 0.00 0.00 44.88 3.55
307 308 6.382859 TGAGTTTGTATGGCTAATCTCTACCA 59.617 38.462 0.00 0.00 36.43 3.25
308 309 6.817184 TGAGTTTGTATGGCTAATCTCTACC 58.183 40.000 0.00 0.00 0.00 3.18
309 310 7.982354 AGTTGAGTTTGTATGGCTAATCTCTAC 59.018 37.037 0.00 0.00 0.00 2.59
310 311 7.981789 CAGTTGAGTTTGTATGGCTAATCTCTA 59.018 37.037 0.00 0.00 0.00 2.43
311 312 6.820656 CAGTTGAGTTTGTATGGCTAATCTCT 59.179 38.462 0.00 0.00 0.00 3.10
312 313 6.818644 TCAGTTGAGTTTGTATGGCTAATCTC 59.181 38.462 0.00 0.00 0.00 2.75
313 314 6.711277 TCAGTTGAGTTTGTATGGCTAATCT 58.289 36.000 0.00 0.00 0.00 2.40
353 354 4.941713 TGGCATCCCTTATTTTAAGGTGT 58.058 39.130 11.37 0.00 35.65 4.16
354 355 6.777580 AGTATGGCATCCCTTATTTTAAGGTG 59.222 38.462 1.65 6.19 35.65 4.00
356 357 6.434340 GGAGTATGGCATCCCTTATTTTAAGG 59.566 42.308 1.65 6.37 37.17 2.69
357 358 6.149474 CGGAGTATGGCATCCCTTATTTTAAG 59.851 42.308 1.65 0.00 31.43 1.85
359 360 5.556915 CGGAGTATGGCATCCCTTATTTTA 58.443 41.667 1.65 0.00 31.43 1.52
360 361 4.398319 CGGAGTATGGCATCCCTTATTTT 58.602 43.478 1.65 0.00 31.43 1.82
368 374 0.463654 TGTTGCGGAGTATGGCATCC 60.464 55.000 1.65 0.00 39.21 3.51
403 409 2.428171 GTGATGTAAGCATGGCCAATGT 59.572 45.455 10.96 0.00 38.65 2.71
512 528 0.528901 TACTTGCGTGCACGTTCAGT 60.529 50.000 36.80 32.62 42.22 3.41
607 651 3.160777 TCGGTTTAAATCGAGAGGAGC 57.839 47.619 19.25 0.00 36.48 4.70
609 653 3.243301 CGGATCGGTTTAAATCGAGAGGA 60.243 47.826 25.98 5.73 45.69 3.71
897 1193 2.122954 GGGGGAGAGGACAGGTGT 59.877 66.667 0.00 0.00 0.00 4.16
1078 1557 2.368011 GGGTAGGACAGGGACAGGC 61.368 68.421 0.00 0.00 0.00 4.85
1093 1572 1.007842 GGAGAGAGAGGGAGAAAGGGT 59.992 57.143 0.00 0.00 0.00 4.34
1096 1575 1.691163 GGGGGAGAGAGAGGGAGAAAG 60.691 61.905 0.00 0.00 0.00 2.62
1115 1603 1.164041 AACAAACAACGAGAGGCGGG 61.164 55.000 0.00 0.00 46.49 6.13
1119 1607 4.505191 TCGAACTTAACAAACAACGAGAGG 59.495 41.667 0.00 0.00 0.00 3.69
1191 1679 0.256464 AAACCCAGACGTGAAACCCA 59.744 50.000 0.00 0.00 0.00 4.51
1220 1708 1.009829 GCAGCCAAACATACGAGAGG 58.990 55.000 0.00 0.00 0.00 3.69
1221 1709 2.015736 AGCAGCCAAACATACGAGAG 57.984 50.000 0.00 0.00 0.00 3.20
1289 1780 3.556213 CGAGTACAGGACCCAATGTTCAA 60.556 47.826 0.00 0.00 0.00 2.69
1322 1814 3.339253 TGATCCAAGTCATCACACCAG 57.661 47.619 0.00 0.00 0.00 4.00
1362 1854 0.178955 TACCTCCCCGACACACAAGA 60.179 55.000 0.00 0.00 0.00 3.02
1416 1909 0.465460 TTTTCTGGTGCAGCGGTCTT 60.465 50.000 23.32 0.00 0.00 3.01
1427 1920 1.463674 GCATGTCCGGATTTTCTGGT 58.536 50.000 7.81 0.00 43.49 4.00
1496 1989 9.182933 GTTTCTTCCTGATACGATATGTACTTC 57.817 37.037 0.00 0.00 35.44 3.01
1511 2063 5.775701 AGTCTTAGTAGCTGTTTCTTCCTGA 59.224 40.000 0.00 0.00 0.00 3.86
1528 2080 3.141398 TGAAACAAGCAGGCAGTCTTAG 58.859 45.455 0.00 0.00 0.00 2.18
1531 2083 1.141657 TCTGAAACAAGCAGGCAGTCT 59.858 47.619 0.00 0.00 34.20 3.24
1548 2259 0.882042 AGGTGCTTGCTTGTCGTCTG 60.882 55.000 0.00 0.00 0.00 3.51
1561 2272 5.532557 GATTTTTGCAAAGAACTAGGTGCT 58.467 37.500 12.41 0.00 37.87 4.40
1594 2305 4.994217 TCAGATCACGTTTAGCACATTCAA 59.006 37.500 0.00 0.00 0.00 2.69
1596 2307 4.033358 CCTCAGATCACGTTTAGCACATTC 59.967 45.833 0.00 0.00 0.00 2.67
1652 2363 5.505165 TCGTAATCTGAGCGTTTTTGTAC 57.495 39.130 0.00 0.00 0.00 2.90
1688 2399 1.743996 GCAATCTCCTGTTCCCAGTC 58.256 55.000 0.00 0.00 36.95 3.51
1694 2405 0.924090 CTACGCGCAATCTCCTGTTC 59.076 55.000 5.73 0.00 0.00 3.18
1696 2407 1.141881 CCTACGCGCAATCTCCTGT 59.858 57.895 5.73 0.00 0.00 4.00
1698 2409 2.107141 GCCTACGCGCAATCTCCT 59.893 61.111 5.73 0.00 0.00 3.69
1709 2420 2.954868 GATGCACGGTCGCCTACG 60.955 66.667 0.00 0.00 42.01 3.51
1711 2422 1.153647 CTTGATGCACGGTCGCCTA 60.154 57.895 0.00 0.00 0.00 3.93
1718 2429 4.610945 GGAAATTTATCCTTGATGCACGG 58.389 43.478 0.00 0.00 36.50 4.94
1791 2596 3.348647 ACATTGTATACTGCAGCCACA 57.651 42.857 15.27 12.45 0.00 4.17
1822 2627 8.477256 ACATACCATTGATTTTCATTCCGATTT 58.523 29.630 0.00 0.00 0.00 2.17
1901 2718 3.765026 TGAGCGTTTGGAGAAACAAAAC 58.235 40.909 0.00 0.00 41.48 2.43
1998 2819 7.998383 ACTCTTTGGATATTTATATGGTGCACA 59.002 33.333 20.43 5.24 0.00 4.57
1999 2820 8.396272 ACTCTTTGGATATTTATATGGTGCAC 57.604 34.615 8.80 8.80 0.00 4.57
2000 2821 8.995027 AACTCTTTGGATATTTATATGGTGCA 57.005 30.769 0.00 0.00 0.00 4.57
2072 2895 2.439507 GGGGATGTGAGCTCCTTATTGA 59.560 50.000 12.15 0.00 33.05 2.57
2091 2914 2.018884 AATATGAAAGGGGGCGGGGG 62.019 60.000 0.00 0.00 0.00 5.40
2092 2915 0.827507 CAATATGAAAGGGGGCGGGG 60.828 60.000 0.00 0.00 0.00 5.73
2093 2916 1.463553 GCAATATGAAAGGGGGCGGG 61.464 60.000 0.00 0.00 0.00 6.13
2094 2917 0.754957 TGCAATATGAAAGGGGGCGG 60.755 55.000 0.00 0.00 0.00 6.13
2095 2918 1.331214 ATGCAATATGAAAGGGGGCG 58.669 50.000 0.00 0.00 0.00 6.13
2096 2919 6.380846 TCATATAATGCAATATGAAAGGGGGC 59.619 38.462 15.60 0.00 42.89 5.80
2194 3030 2.022240 GCGCTCTACCCTCAGGAAGG 62.022 65.000 0.00 0.00 45.77 3.46
2277 3137 4.015872 AGGCTCATTTTTAGAACCACGA 57.984 40.909 0.00 0.00 0.00 4.35
2302 3162 8.603898 TTGTCATATAAGGAGTACTTGAAGGA 57.396 34.615 0.00 0.00 40.37 3.36
2503 3459 8.170553 GCAAACAAAAATATTAGTGAATGCCTG 58.829 33.333 14.74 0.00 0.00 4.85
2655 3615 1.339055 ACACCATCATCACCAACTCGG 60.339 52.381 0.00 0.00 42.50 4.63
2656 3616 1.733912 CACACCATCATCACCAACTCG 59.266 52.381 0.00 0.00 0.00 4.18
2657 3617 1.470098 GCACACCATCATCACCAACTC 59.530 52.381 0.00 0.00 0.00 3.01
2658 3618 1.538047 GCACACCATCATCACCAACT 58.462 50.000 0.00 0.00 0.00 3.16
2659 3619 0.527565 GGCACACCATCATCACCAAC 59.472 55.000 0.00 0.00 35.26 3.77
2660 3620 0.405198 AGGCACACCATCATCACCAA 59.595 50.000 0.00 0.00 39.06 3.67
2661 3621 0.322726 CAGGCACACCATCATCACCA 60.323 55.000 0.00 0.00 39.06 4.17
2662 3622 1.660560 GCAGGCACACCATCATCACC 61.661 60.000 0.00 0.00 39.06 4.02
2663 3623 1.660560 GGCAGGCACACCATCATCAC 61.661 60.000 0.00 0.00 39.06 3.06
2664 3624 1.378911 GGCAGGCACACCATCATCA 60.379 57.895 0.00 0.00 39.06 3.07
2665 3625 0.754217 ATGGCAGGCACACCATCATC 60.754 55.000 0.00 0.00 42.69 2.92
2666 3626 1.308666 ATGGCAGGCACACCATCAT 59.691 52.632 0.00 0.00 42.69 2.45
2667 3627 2.765279 ATGGCAGGCACACCATCA 59.235 55.556 0.00 0.00 42.69 3.07
2670 3630 1.604308 CAAGATGGCAGGCACACCA 60.604 57.895 0.00 0.00 41.01 4.17
2671 3631 0.322456 TACAAGATGGCAGGCACACC 60.322 55.000 0.00 0.00 0.00 4.16
2672 3632 1.533625 TTACAAGATGGCAGGCACAC 58.466 50.000 0.00 0.00 0.00 3.82
2673 3633 2.512692 ATTACAAGATGGCAGGCACA 57.487 45.000 0.00 0.00 0.00 4.57
2674 3634 5.409826 GTCTATATTACAAGATGGCAGGCAC 59.590 44.000 0.00 0.00 0.00 5.01
2675 3635 5.513094 GGTCTATATTACAAGATGGCAGGCA 60.513 44.000 0.00 0.00 0.00 4.75
2676 3636 4.938226 GGTCTATATTACAAGATGGCAGGC 59.062 45.833 0.00 0.00 0.00 4.85
2677 3637 5.171476 CGGTCTATATTACAAGATGGCAGG 58.829 45.833 0.00 0.00 0.00 4.85
2678 3638 5.784177 ACGGTCTATATTACAAGATGGCAG 58.216 41.667 0.00 0.00 0.00 4.85
2679 3639 5.279306 GGACGGTCTATATTACAAGATGGCA 60.279 44.000 8.23 0.00 0.00 4.92
2680 3640 5.169295 GGACGGTCTATATTACAAGATGGC 58.831 45.833 8.23 0.00 0.00 4.40
2681 3641 5.182570 TCGGACGGTCTATATTACAAGATGG 59.817 44.000 8.23 0.00 0.00 3.51
2682 3642 6.250344 TCGGACGGTCTATATTACAAGATG 57.750 41.667 8.23 0.00 0.00 2.90
2683 3643 6.885376 AGATCGGACGGTCTATATTACAAGAT 59.115 38.462 5.58 0.00 0.00 2.40
2684 3644 6.236409 AGATCGGACGGTCTATATTACAAGA 58.764 40.000 5.58 0.00 0.00 3.02
2685 3645 6.497785 AGATCGGACGGTCTATATTACAAG 57.502 41.667 5.58 0.00 0.00 3.16
2686 3646 9.842775 ATATAGATCGGACGGTCTATATTACAA 57.157 33.333 28.56 14.88 43.21 2.41
2687 3647 9.486497 GATATAGATCGGACGGTCTATATTACA 57.514 37.037 31.81 17.64 44.58 2.41
2688 3648 9.709495 AGATATAGATCGGACGGTCTATATTAC 57.291 37.037 31.81 24.40 44.58 1.89
2691 3651 9.709495 GTTAGATATAGATCGGACGGTCTATAT 57.291 37.037 31.81 31.81 46.01 0.86
2692 3652 7.864882 CGTTAGATATAGATCGGACGGTCTATA 59.135 40.741 27.21 27.21 41.56 1.31
2693 3653 6.700960 CGTTAGATATAGATCGGACGGTCTAT 59.299 42.308 25.24 25.24 39.49 1.98
2694 3654 6.038985 CGTTAGATATAGATCGGACGGTCTA 58.961 44.000 16.04 16.04 39.49 2.59
2695 3655 4.869297 CGTTAGATATAGATCGGACGGTCT 59.131 45.833 12.50 12.50 39.49 3.85
2696 3656 5.141355 CGTTAGATATAGATCGGACGGTC 57.859 47.826 15.93 0.00 39.49 4.79
2702 3662 8.071368 GCTTTCTATCCGTTAGATATAGATCGG 58.929 40.741 0.00 0.00 36.84 4.18
2703 3663 8.613482 TGCTTTCTATCCGTTAGATATAGATCG 58.387 37.037 0.00 0.00 36.84 3.69
2706 3666 9.909644 GTTTGCTTTCTATCCGTTAGATATAGA 57.090 33.333 0.00 0.00 36.84 1.98
2707 3667 9.915629 AGTTTGCTTTCTATCCGTTAGATATAG 57.084 33.333 0.00 0.00 36.84 1.31
2710 3670 9.692749 CATAGTTTGCTTTCTATCCGTTAGATA 57.307 33.333 0.00 0.00 36.81 1.98
2711 3671 8.421784 TCATAGTTTGCTTTCTATCCGTTAGAT 58.578 33.333 0.00 0.00 36.81 1.98
2712 3672 7.705325 GTCATAGTTTGCTTTCTATCCGTTAGA 59.295 37.037 0.00 0.00 35.06 2.10
2713 3673 7.491372 TGTCATAGTTTGCTTTCTATCCGTTAG 59.509 37.037 0.00 0.00 0.00 2.34
2714 3674 7.324935 TGTCATAGTTTGCTTTCTATCCGTTA 58.675 34.615 0.00 0.00 0.00 3.18
2715 3675 6.170506 TGTCATAGTTTGCTTTCTATCCGTT 58.829 36.000 0.00 0.00 0.00 4.44
2716 3676 5.730550 TGTCATAGTTTGCTTTCTATCCGT 58.269 37.500 0.00 0.00 0.00 4.69
2717 3677 6.662414 TTGTCATAGTTTGCTTTCTATCCG 57.338 37.500 0.00 0.00 0.00 4.18
2718 3678 9.860898 AAAATTGTCATAGTTTGCTTTCTATCC 57.139 29.630 0.00 0.00 0.00 2.59
2732 3692 9.716507 CGGGTATCTTTTGTAAAATTGTCATAG 57.283 33.333 0.00 0.00 0.00 2.23
2733 3693 8.185505 GCGGGTATCTTTTGTAAAATTGTCATA 58.814 33.333 0.00 0.00 0.00 2.15
2734 3694 7.033185 GCGGGTATCTTTTGTAAAATTGTCAT 58.967 34.615 0.00 0.00 0.00 3.06
2735 3695 6.016192 TGCGGGTATCTTTTGTAAAATTGTCA 60.016 34.615 0.00 0.00 0.00 3.58
2736 3696 6.307077 GTGCGGGTATCTTTTGTAAAATTGTC 59.693 38.462 0.00 0.00 0.00 3.18
2737 3697 6.153756 GTGCGGGTATCTTTTGTAAAATTGT 58.846 36.000 0.00 0.00 0.00 2.71
2738 3698 5.575218 GGTGCGGGTATCTTTTGTAAAATTG 59.425 40.000 0.00 0.00 0.00 2.32
2739 3699 5.479027 AGGTGCGGGTATCTTTTGTAAAATT 59.521 36.000 0.00 0.00 0.00 1.82
2740 3700 5.014202 AGGTGCGGGTATCTTTTGTAAAAT 58.986 37.500 0.00 0.00 0.00 1.82
2741 3701 4.400120 AGGTGCGGGTATCTTTTGTAAAA 58.600 39.130 0.00 0.00 0.00 1.52
2742 3702 4.004982 GAGGTGCGGGTATCTTTTGTAAA 58.995 43.478 0.00 0.00 0.00 2.01
2743 3703 3.262405 AGAGGTGCGGGTATCTTTTGTAA 59.738 43.478 0.00 0.00 0.00 2.41
2744 3704 2.835764 AGAGGTGCGGGTATCTTTTGTA 59.164 45.455 0.00 0.00 0.00 2.41
2745 3705 1.628846 AGAGGTGCGGGTATCTTTTGT 59.371 47.619 0.00 0.00 0.00 2.83
2746 3706 2.093447 AGAGAGGTGCGGGTATCTTTTG 60.093 50.000 0.00 0.00 0.00 2.44
2747 3707 2.168728 GAGAGAGGTGCGGGTATCTTTT 59.831 50.000 0.00 0.00 0.00 2.27
2748 3708 1.757699 GAGAGAGGTGCGGGTATCTTT 59.242 52.381 0.00 0.00 0.00 2.52
2749 3709 1.404843 GAGAGAGGTGCGGGTATCTT 58.595 55.000 0.00 0.00 0.00 2.40
2750 3710 0.468400 GGAGAGAGGTGCGGGTATCT 60.468 60.000 0.00 0.00 0.00 1.98
2751 3711 0.755698 TGGAGAGAGGTGCGGGTATC 60.756 60.000 0.00 0.00 0.00 2.24
2752 3712 1.043673 GTGGAGAGAGGTGCGGGTAT 61.044 60.000 0.00 0.00 0.00 2.73
2753 3713 1.681327 GTGGAGAGAGGTGCGGGTA 60.681 63.158 0.00 0.00 0.00 3.69
2754 3714 2.997897 GTGGAGAGAGGTGCGGGT 60.998 66.667 0.00 0.00 0.00 5.28
2755 3715 1.903877 AATGTGGAGAGAGGTGCGGG 61.904 60.000 0.00 0.00 0.00 6.13
2756 3716 0.036010 AAATGTGGAGAGAGGTGCGG 60.036 55.000 0.00 0.00 0.00 5.69
2757 3717 2.271800 GTAAATGTGGAGAGAGGTGCG 58.728 52.381 0.00 0.00 0.00 5.34
2758 3718 3.055819 TCTGTAAATGTGGAGAGAGGTGC 60.056 47.826 0.00 0.00 0.00 5.01
2759 3719 4.808414 TCTGTAAATGTGGAGAGAGGTG 57.192 45.455 0.00 0.00 0.00 4.00
2760 3720 6.098982 CCTTATCTGTAAATGTGGAGAGAGGT 59.901 42.308 0.00 0.00 0.00 3.85
2761 3721 6.520272 CCTTATCTGTAAATGTGGAGAGAGG 58.480 44.000 0.00 0.00 0.00 3.69
2762 3722 5.988561 GCCTTATCTGTAAATGTGGAGAGAG 59.011 44.000 0.00 0.00 0.00 3.20
2763 3723 5.163301 GGCCTTATCTGTAAATGTGGAGAGA 60.163 44.000 0.00 0.00 0.00 3.10
2764 3724 5.059833 GGCCTTATCTGTAAATGTGGAGAG 58.940 45.833 0.00 0.00 0.00 3.20
2765 3725 4.721776 AGGCCTTATCTGTAAATGTGGAGA 59.278 41.667 0.00 0.00 0.00 3.71
2766 3726 5.041191 AGGCCTTATCTGTAAATGTGGAG 57.959 43.478 0.00 0.00 0.00 3.86
2767 3727 5.192927 CAAGGCCTTATCTGTAAATGTGGA 58.807 41.667 20.00 0.00 0.00 4.02
2768 3728 4.202050 GCAAGGCCTTATCTGTAAATGTGG 60.202 45.833 20.00 1.10 0.00 4.17
2769 3729 4.202050 GGCAAGGCCTTATCTGTAAATGTG 60.202 45.833 20.00 2.34 46.69 3.21
2770 3730 3.954258 GGCAAGGCCTTATCTGTAAATGT 59.046 43.478 20.00 0.00 46.69 2.71
2771 3731 4.574599 GGCAAGGCCTTATCTGTAAATG 57.425 45.455 20.00 3.17 46.69 2.32
2785 3745 0.678048 AAGGATGAACGAGGCAAGGC 60.678 55.000 0.00 0.00 0.00 4.35
2786 3746 2.691409 TAAGGATGAACGAGGCAAGG 57.309 50.000 0.00 0.00 0.00 3.61
2787 3747 4.054671 GAGATAAGGATGAACGAGGCAAG 58.945 47.826 0.00 0.00 0.00 4.01
2788 3748 3.181465 GGAGATAAGGATGAACGAGGCAA 60.181 47.826 0.00 0.00 0.00 4.52
2789 3749 2.365617 GGAGATAAGGATGAACGAGGCA 59.634 50.000 0.00 0.00 0.00 4.75
2790 3750 2.289133 GGGAGATAAGGATGAACGAGGC 60.289 54.545 0.00 0.00 0.00 4.70
2791 3751 2.965831 TGGGAGATAAGGATGAACGAGG 59.034 50.000 0.00 0.00 0.00 4.63
2792 3752 3.384789 TGTGGGAGATAAGGATGAACGAG 59.615 47.826 0.00 0.00 0.00 4.18
2793 3753 3.371034 TGTGGGAGATAAGGATGAACGA 58.629 45.455 0.00 0.00 0.00 3.85
2794 3754 3.819564 TGTGGGAGATAAGGATGAACG 57.180 47.619 0.00 0.00 0.00 3.95
2795 3755 5.359194 TCTTGTGGGAGATAAGGATGAAC 57.641 43.478 0.00 0.00 0.00 3.18
2796 3756 7.690454 TTATCTTGTGGGAGATAAGGATGAA 57.310 36.000 3.83 0.00 41.38 2.57
2797 3757 7.348274 AGTTTATCTTGTGGGAGATAAGGATGA 59.652 37.037 7.23 0.00 44.82 2.92
2798 3758 7.512992 AGTTTATCTTGTGGGAGATAAGGATG 58.487 38.462 7.23 0.00 44.82 3.51
2799 3759 7.698163 AGTTTATCTTGTGGGAGATAAGGAT 57.302 36.000 7.23 0.00 44.82 3.24
2800 3760 7.844779 AGTAGTTTATCTTGTGGGAGATAAGGA 59.155 37.037 7.23 0.00 44.82 3.36
2801 3761 8.024145 AGTAGTTTATCTTGTGGGAGATAAGG 57.976 38.462 7.23 0.00 44.82 2.69
2802 3762 8.696374 TGAGTAGTTTATCTTGTGGGAGATAAG 58.304 37.037 7.23 0.00 44.82 1.73
2803 3763 8.603898 TGAGTAGTTTATCTTGTGGGAGATAA 57.396 34.615 3.83 3.83 43.38 1.75
2804 3764 8.783660 ATGAGTAGTTTATCTTGTGGGAGATA 57.216 34.615 0.00 0.00 37.54 1.98
2805 3765 7.682787 ATGAGTAGTTTATCTTGTGGGAGAT 57.317 36.000 0.00 0.00 39.59 2.75
2806 3766 7.618117 TGTATGAGTAGTTTATCTTGTGGGAGA 59.382 37.037 0.00 0.00 0.00 3.71
2807 3767 7.782049 TGTATGAGTAGTTTATCTTGTGGGAG 58.218 38.462 0.00 0.00 0.00 4.30
2808 3768 7.727578 TGTATGAGTAGTTTATCTTGTGGGA 57.272 36.000 0.00 0.00 0.00 4.37
2809 3769 8.786826 TTTGTATGAGTAGTTTATCTTGTGGG 57.213 34.615 0.00 0.00 0.00 4.61
2811 3771 9.708222 GCATTTGTATGAGTAGTTTATCTTGTG 57.292 33.333 0.00 0.00 33.37 3.33
2812 3772 9.448438 TGCATTTGTATGAGTAGTTTATCTTGT 57.552 29.630 0.00 0.00 33.37 3.16
2818 3778 9.665719 TCAAGATGCATTTGTATGAGTAGTTTA 57.334 29.630 0.00 0.00 33.37 2.01
2819 3779 8.565896 TCAAGATGCATTTGTATGAGTAGTTT 57.434 30.769 0.00 0.00 33.37 2.66
2820 3780 8.618677 CATCAAGATGCATTTGTATGAGTAGTT 58.381 33.333 0.00 0.00 33.37 2.24
2821 3781 7.772292 ACATCAAGATGCATTTGTATGAGTAGT 59.228 33.333 22.17 13.08 42.39 2.73
2822 3782 8.068380 CACATCAAGATGCATTTGTATGAGTAG 58.932 37.037 22.17 12.72 42.39 2.57
2823 3783 7.467675 GCACATCAAGATGCATTTGTATGAGTA 60.468 37.037 22.17 8.59 42.39 2.59
2824 3784 6.679638 GCACATCAAGATGCATTTGTATGAGT 60.680 38.462 22.17 12.92 42.39 3.41
2825 3785 5.685954 GCACATCAAGATGCATTTGTATGAG 59.314 40.000 22.17 18.84 42.39 2.90
2826 3786 5.450826 GGCACATCAAGATGCATTTGTATGA 60.451 40.000 22.17 15.31 43.93 2.15
2827 3787 4.743151 GGCACATCAAGATGCATTTGTATG 59.257 41.667 9.85 13.57 43.93 2.39
2828 3788 4.498513 CGGCACATCAAGATGCATTTGTAT 60.499 41.667 9.85 1.80 43.93 2.29
2829 3789 3.181498 CGGCACATCAAGATGCATTTGTA 60.181 43.478 9.85 0.00 43.93 2.41
2830 3790 2.416296 CGGCACATCAAGATGCATTTGT 60.416 45.455 9.85 0.00 43.93 2.83
2831 3791 2.190161 CGGCACATCAAGATGCATTTG 58.810 47.619 9.85 7.88 43.93 2.32
2832 3792 1.820519 ACGGCACATCAAGATGCATTT 59.179 42.857 9.85 0.00 43.93 2.32
2833 3793 1.133598 CACGGCACATCAAGATGCATT 59.866 47.619 9.85 0.00 43.93 3.56
2834 3794 0.736636 CACGGCACATCAAGATGCAT 59.263 50.000 9.85 0.00 43.93 3.96
2835 3795 1.925415 GCACGGCACATCAAGATGCA 61.925 55.000 9.85 0.00 43.93 3.96
2836 3796 1.226491 GCACGGCACATCAAGATGC 60.226 57.895 9.85 0.00 42.39 3.91
2837 3797 0.522626 TTGCACGGCACATCAAGATG 59.477 50.000 8.45 8.45 44.15 2.90
2838 3798 0.523072 GTTGCACGGCACATCAAGAT 59.477 50.000 0.00 0.00 38.71 2.40
2839 3799 1.840630 CGTTGCACGGCACATCAAGA 61.841 55.000 0.00 0.00 38.71 3.02
2840 3800 1.440850 CGTTGCACGGCACATCAAG 60.441 57.895 0.00 0.00 38.71 3.02
2841 3801 2.636462 CGTTGCACGGCACATCAA 59.364 55.556 0.00 0.00 38.71 2.57
2842 3802 4.024143 GCGTTGCACGGCACATCA 62.024 61.111 10.02 0.00 42.82 3.07
2843 3803 3.326889 ATGCGTTGCACGGCACATC 62.327 57.895 12.62 0.00 43.04 3.06
2844 3804 3.364441 ATGCGTTGCACGGCACAT 61.364 55.556 12.62 4.30 43.04 3.21
2845 3805 4.325304 CATGCGTTGCACGGCACA 62.325 61.111 12.62 2.30 43.04 4.57
2850 3810 4.118995 ATGCCCATGCGTTGCACG 62.119 61.111 2.13 4.61 43.04 5.34
2851 3811 2.202650 GATGCCCATGCGTTGCAC 60.203 61.111 2.13 0.00 43.04 4.57
2852 3812 1.978080 AAGATGCCCATGCGTTGCA 60.978 52.632 2.57 2.57 44.86 4.08
2853 3813 1.517694 CAAGATGCCCATGCGTTGC 60.518 57.895 0.00 0.00 41.78 4.17
2854 3814 1.517694 GCAAGATGCCCATGCGTTG 60.518 57.895 0.00 0.00 41.78 4.10
2855 3815 0.394216 TAGCAAGATGCCCATGCGTT 60.394 50.000 0.00 0.00 46.52 4.84
2856 3816 0.816825 CTAGCAAGATGCCCATGCGT 60.817 55.000 0.00 0.00 46.52 5.24
2857 3817 0.816825 ACTAGCAAGATGCCCATGCG 60.817 55.000 0.00 0.00 46.52 4.73
2858 3818 2.260844 TACTAGCAAGATGCCCATGC 57.739 50.000 0.00 0.00 46.52 4.06
2859 3819 4.139786 ACAATACTAGCAAGATGCCCATG 58.860 43.478 0.00 0.00 46.52 3.66
2860 3820 4.443978 ACAATACTAGCAAGATGCCCAT 57.556 40.909 0.00 0.00 46.52 4.00
2861 3821 3.931907 ACAATACTAGCAAGATGCCCA 57.068 42.857 0.00 0.00 46.52 5.36
2862 3822 6.693315 TTTAACAATACTAGCAAGATGCCC 57.307 37.500 0.00 0.00 46.52 5.36
2863 3823 8.624776 AGAATTTAACAATACTAGCAAGATGCC 58.375 33.333 0.00 0.00 46.52 4.40
2864 3824 9.657121 GAGAATTTAACAATACTAGCAAGATGC 57.343 33.333 0.00 0.00 45.46 3.91
2867 3827 9.944376 ACAGAGAATTTAACAATACTAGCAAGA 57.056 29.630 0.00 0.00 0.00 3.02
2870 3830 9.502091 ACAACAGAGAATTTAACAATACTAGCA 57.498 29.630 0.00 0.00 0.00 3.49
2875 3835 9.103048 CGTCAACAACAGAGAATTTAACAATAC 57.897 33.333 0.00 0.00 0.00 1.89
2900 3860 3.270027 TGCCAAGTGATCCTAATCAACG 58.730 45.455 0.00 0.00 43.42 4.10
3144 4105 7.182760 TCACCTATGGTATGAGGTAGAATAGG 58.817 42.308 0.00 0.00 44.54 2.57
3160 4121 6.486657 TCAGAAAAAGAAGTGTTCACCTATGG 59.513 38.462 0.00 0.00 0.00 2.74
3249 4210 6.768861 ACGTTAGCTAGTTCTATGATGACTCT 59.231 38.462 0.00 0.00 0.00 3.24
3304 4266 1.327303 TGTTTCAGAATGGTGTGCCC 58.673 50.000 0.00 0.00 36.16 5.36
3484 4446 4.828072 ATCAAGGACCAGAGAGTTAACC 57.172 45.455 0.88 0.00 0.00 2.85
3492 4454 7.281100 GGTTGTATCTTAAATCAAGGACCAGAG 59.719 40.741 0.00 0.00 34.76 3.35
3513 4475 1.298667 GCGGACCATGGTAGGTTGT 59.701 57.895 19.80 0.00 43.38 3.32
3630 4592 4.925054 ACGCTTCATCCATGATTTGTTTTG 59.075 37.500 0.00 0.00 36.56 2.44
3639 4601 2.295629 TGCAAAAACGCTTCATCCATGA 59.704 40.909 0.00 0.00 34.44 3.07
3651 4613 3.143807 TGAAAGTGGAGTGCAAAAACG 57.856 42.857 0.00 0.00 0.00 3.60
3654 4616 5.534278 TCATGTATGAAAGTGGAGTGCAAAA 59.466 36.000 0.00 0.00 33.08 2.44
3660 4622 6.305272 ACTGATCATGTATGAAAGTGGAGT 57.695 37.500 0.00 0.00 40.69 3.85
3720 4682 8.988934 GCAATATAAGTCGGATATTTTGAGTCA 58.011 33.333 0.00 0.00 28.95 3.41
3721 4683 9.209175 AGCAATATAAGTCGGATATTTTGAGTC 57.791 33.333 6.19 0.00 28.95 3.36
3722 4684 9.561069 AAGCAATATAAGTCGGATATTTTGAGT 57.439 29.630 6.19 0.00 28.95 3.41
3724 4686 9.554395 TGAAGCAATATAAGTCGGATATTTTGA 57.446 29.630 6.19 0.00 28.95 2.69
3725 4687 9.599322 GTGAAGCAATATAAGTCGGATATTTTG 57.401 33.333 0.00 0.00 28.95 2.44
3726 4688 9.337396 TGTGAAGCAATATAAGTCGGATATTTT 57.663 29.630 0.00 0.00 28.95 1.82
3734 4696 9.746711 GCTATTAATGTGAAGCAATATAAGTCG 57.253 33.333 0.00 0.00 35.05 4.18
3796 4758 6.349300 CAGCATGAGTAGGTTAAGTTATGGT 58.651 40.000 0.00 0.00 39.69 3.55
3911 4873 4.538490 TGAGGTAAAGGGAGGATGCTAAAA 59.462 41.667 0.00 0.00 0.00 1.52
3953 4915 8.682936 AAAGATACTTGACAAACTGACTGAAT 57.317 30.769 0.00 0.00 0.00 2.57
3968 4930 9.390795 CAAAAGACTGATCACAAAAGATACTTG 57.609 33.333 0.00 0.00 0.00 3.16
3971 4933 7.875971 ACCAAAAGACTGATCACAAAAGATAC 58.124 34.615 0.00 0.00 0.00 2.24
3986 4948 5.405935 AAAGCAAGTTCAACCAAAAGACT 57.594 34.783 0.00 0.00 0.00 3.24
4199 5162 8.070034 TCGTAAGTGAAATCCAGTAAGGAATA 57.930 34.615 0.00 0.00 45.26 1.75
4203 5166 7.042658 GCTAATCGTAAGTGAAATCCAGTAAGG 60.043 40.741 0.00 0.00 39.48 2.69
4212 5175 7.172532 TGACAAGTTGCTAATCGTAAGTGAAAT 59.827 33.333 1.81 0.00 39.48 2.17
4437 5400 8.478877 ACTCCCTCTGTACATAAATGTAAGAAG 58.521 37.037 4.43 4.07 44.11 2.85
4453 5416 5.186021 CACAGTTAGAATGTACTCCCTCTGT 59.814 44.000 0.00 0.00 33.62 3.41
4474 5437 4.996758 ACAATGTTCAGATCACGAATCACA 59.003 37.500 0.00 0.00 36.79 3.58
4578 5542 2.741092 GGGACCAGCTTCACGTCA 59.259 61.111 0.00 0.00 0.00 4.35
4945 5909 9.998106 GTACAGGTGAATATGTGAGGTAATAAT 57.002 33.333 0.00 0.00 0.00 1.28
5089 6565 9.683069 ATTTGATCTTGTGTTGTTTGATAGTTC 57.317 29.630 0.00 0.00 0.00 3.01
5102 6583 6.161381 GCATTTCCTTGATTTGATCTTGTGT 58.839 36.000 0.00 0.00 0.00 3.72
5103 6584 6.160684 TGCATTTCCTTGATTTGATCTTGTG 58.839 36.000 0.00 0.00 0.00 3.33
5104 6585 6.349243 TGCATTTCCTTGATTTGATCTTGT 57.651 33.333 0.00 0.00 0.00 3.16
5105 6586 7.547722 TGATTGCATTTCCTTGATTTGATCTTG 59.452 33.333 0.00 0.00 0.00 3.02
5106 6587 7.617225 TGATTGCATTTCCTTGATTTGATCTT 58.383 30.769 0.00 0.00 0.00 2.40
5107 6588 7.177832 TGATTGCATTTCCTTGATTTGATCT 57.822 32.000 0.00 0.00 0.00 2.75
5108 6589 9.537192 TTATGATTGCATTTCCTTGATTTGATC 57.463 29.630 0.00 0.00 35.94 2.92
5109 6590 9.321562 GTTATGATTGCATTTCCTTGATTTGAT 57.678 29.630 0.00 0.00 35.94 2.57
5110 6591 8.312564 TGTTATGATTGCATTTCCTTGATTTGA 58.687 29.630 0.00 0.00 35.94 2.69
5111 6592 8.481974 TGTTATGATTGCATTTCCTTGATTTG 57.518 30.769 0.00 0.00 35.94 2.32
5112 6593 8.533657 TCTGTTATGATTGCATTTCCTTGATTT 58.466 29.630 0.00 0.00 35.94 2.17
5113 6594 8.070034 TCTGTTATGATTGCATTTCCTTGATT 57.930 30.769 0.00 0.00 35.94 2.57
5114 6595 7.649533 TCTGTTATGATTGCATTTCCTTGAT 57.350 32.000 0.00 0.00 35.94 2.57
5115 6596 7.465353 TTCTGTTATGATTGCATTTCCTTGA 57.535 32.000 0.00 0.00 35.94 3.02
5116 6597 6.255020 GCTTCTGTTATGATTGCATTTCCTTG 59.745 38.462 0.00 0.00 35.94 3.61
5117 6598 6.071221 TGCTTCTGTTATGATTGCATTTCCTT 60.071 34.615 0.00 0.00 35.94 3.36
5118 6599 5.419788 TGCTTCTGTTATGATTGCATTTCCT 59.580 36.000 0.00 0.00 35.94 3.36
5119 6600 5.653507 TGCTTCTGTTATGATTGCATTTCC 58.346 37.500 0.00 0.00 35.94 3.13
5120 6601 7.008992 GTCTTGCTTCTGTTATGATTGCATTTC 59.991 37.037 0.00 0.00 35.94 2.17
5121 6602 6.810182 GTCTTGCTTCTGTTATGATTGCATTT 59.190 34.615 0.00 0.00 35.94 2.32
5122 6603 6.071784 TGTCTTGCTTCTGTTATGATTGCATT 60.072 34.615 0.00 0.00 35.94 3.56
5123 6604 5.416639 TGTCTTGCTTCTGTTATGATTGCAT 59.583 36.000 0.00 0.00 38.54 3.96
5124 6605 4.761227 TGTCTTGCTTCTGTTATGATTGCA 59.239 37.500 0.00 0.00 0.00 4.08
5132 6613 8.946085 CCTATTGTATTTGTCTTGCTTCTGTTA 58.054 33.333 0.00 0.00 0.00 2.41
5138 6619 5.652452 GGACCCTATTGTATTTGTCTTGCTT 59.348 40.000 0.00 0.00 0.00 3.91
5146 6627 4.788925 TCCCTGGACCCTATTGTATTTG 57.211 45.455 0.00 0.00 0.00 2.32
5209 6690 3.181466 ACTGAGGGCCATTTTGTTTGTTC 60.181 43.478 6.18 0.00 0.00 3.18
5226 6707 5.173664 TCATCTGTTGTGCATCTAACTGAG 58.826 41.667 18.41 13.38 37.89 3.35
5311 6793 1.136305 TCTTCGGTACACCATAGCAGC 59.864 52.381 0.00 0.00 35.14 5.25
5320 6802 9.113876 CACAATTTTTCTTTATCTTCGGTACAC 57.886 33.333 0.00 0.00 0.00 2.90
5571 7137 7.120285 TCTGAAAAGCAACAAGATTCATAGGAG 59.880 37.037 0.00 0.00 30.39 3.69
5643 7209 5.255397 TGAGGTCAATAGATTGGTTGGTT 57.745 39.130 2.52 0.00 38.30 3.67
5644 7210 4.927267 TGAGGTCAATAGATTGGTTGGT 57.073 40.909 2.52 0.00 38.30 3.67
5645 7211 5.439721 TGATGAGGTCAATAGATTGGTTGG 58.560 41.667 2.52 0.00 38.30 3.77
5657 7548 9.685276 ACTTATTGAATACAATGATGAGGTCAA 57.315 29.630 0.00 0.00 44.97 3.18
5689 7580 0.540133 TGCTCAAGGAATTGCAGCCA 60.540 50.000 0.00 0.00 0.00 4.75
5725 7616 6.615088 ACTGTGTTGTTGATGAGAATATTGC 58.385 36.000 0.00 0.00 0.00 3.56
5780 7671 4.202631 TGCTTAGTTGGTTCCTTGGGTTAT 60.203 41.667 0.00 0.00 0.00 1.89
5781 7672 3.138653 TGCTTAGTTGGTTCCTTGGGTTA 59.861 43.478 0.00 0.00 0.00 2.85
5782 7673 2.091555 TGCTTAGTTGGTTCCTTGGGTT 60.092 45.455 0.00 0.00 0.00 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.