Multiple sequence alignment - TraesCS2A01G213100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G213100 chr2A 100.000 3140 0 0 1 3140 197788035 197784896 0.000000e+00 5799.0
1 TraesCS2A01G213100 chr7D 89.474 1273 129 4 826 2096 536918797 536917528 0.000000e+00 1604.0
2 TraesCS2A01G213100 chr7D 89.631 839 83 4 2092 2926 536907637 536906799 0.000000e+00 1064.0
3 TraesCS2A01G213100 chr2B 93.383 801 51 1 2 800 239192708 239191908 0.000000e+00 1184.0
4 TraesCS2A01G213100 chr3B 83.696 276 45 0 2861 3136 3726785 3726510 8.640000e-66 261.0
5 TraesCS2A01G213100 chr2D 87.124 233 24 3 823 1051 44333035 44333265 3.110000e-65 259.0
6 TraesCS2A01G213100 chr5B 75.463 216 45 8 2563 2774 399031157 399030946 7.170000e-17 99.0
7 TraesCS2A01G213100 chr6B 88.889 63 7 0 2464 2526 664198510 664198572 9.340000e-11 78.7
8 TraesCS2A01G213100 chr3A 78.070 114 23 2 101 213 429064584 429064472 1.560000e-08 71.3
9 TraesCS2A01G213100 chr7A 100.000 28 0 0 1262 1289 664266569 664266542 6.000000e-03 52.8
10 TraesCS2A01G213100 chr5A 100.000 28 0 0 1262 1289 567021266 567021239 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G213100 chr2A 197784896 197788035 3139 True 5799 5799 100.000 1 3140 1 chr2A.!!$R1 3139
1 TraesCS2A01G213100 chr7D 536917528 536918797 1269 True 1604 1604 89.474 826 2096 1 chr7D.!!$R2 1270
2 TraesCS2A01G213100 chr7D 536906799 536907637 838 True 1064 1064 89.631 2092 2926 1 chr7D.!!$R1 834
3 TraesCS2A01G213100 chr2B 239191908 239192708 800 True 1184 1184 93.383 2 800 1 chr2B.!!$R1 798

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
988 992 0.104487 TTCCACTGTTCCGTTACGCA 59.896 50.0 0.0 0.0 0.0 5.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2511 2520 0.036022 TGATCCCACATGCGTTGACA 59.964 50.0 0.0 0.0 0.0 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 7.396907 TCATCCTTGAATCTGGCTTTAATTCAA 59.603 33.333 8.84 8.84 43.48 2.69
89 90 4.993705 TGTCCCTAACAAAACCAGATCT 57.006 40.909 0.00 0.00 34.03 2.75
90 91 4.906618 TGTCCCTAACAAAACCAGATCTC 58.093 43.478 0.00 0.00 34.03 2.75
109 110 6.601217 AGATCTCCATTTAGCAAAAGAAGGTC 59.399 38.462 0.00 0.00 0.00 3.85
111 112 5.940470 TCTCCATTTAGCAAAAGAAGGTCTC 59.060 40.000 0.00 0.00 0.00 3.36
152 153 5.798125 TCATTCCTCACTGTCCAGATATC 57.202 43.478 0.40 0.00 0.00 1.63
156 157 3.041211 CCTCACTGTCCAGATATCCCAA 58.959 50.000 0.40 0.00 0.00 4.12
159 160 3.452264 TCACTGTCCAGATATCCCAACAG 59.548 47.826 19.62 19.62 39.90 3.16
162 163 1.490490 GTCCAGATATCCCAACAGGCA 59.510 52.381 0.00 0.00 34.51 4.75
170 171 2.380064 TCCCAACAGGCAGTGAAAAT 57.620 45.000 0.00 0.00 34.51 1.82
191 192 5.789643 ATTACTTCAGCAAAGAAAGGCAA 57.210 34.783 5.93 0.00 38.44 4.52
194 195 2.888834 TCAGCAAAGAAAGGCAAACC 57.111 45.000 0.00 0.00 0.00 3.27
212 213 2.288525 ACCAAAATCCCTCCTAGCCTT 58.711 47.619 0.00 0.00 0.00 4.35
237 238 3.379372 AGGCTATTTCACACATGTCATGC 59.621 43.478 12.91 0.00 0.00 4.06
242 243 1.246649 TCACACATGTCATGCCCAAC 58.753 50.000 12.91 0.00 0.00 3.77
282 283 5.699143 AGATAATTCCAAATCCCCACTCTG 58.301 41.667 0.00 0.00 0.00 3.35
302 303 7.484007 CACTCTGAAATTGCATGTGAAGAATAC 59.516 37.037 12.05 0.00 0.00 1.89
318 319 4.825445 AGAATACATGATCCCTGTCCTCT 58.175 43.478 0.00 3.41 0.00 3.69
331 332 3.583806 CTGTCCTCTTTAGAGTGTGCAG 58.416 50.000 6.06 4.93 40.48 4.41
334 335 2.563179 TCCTCTTTAGAGTGTGCAGGAC 59.437 50.000 6.06 0.00 40.48 3.85
344 345 2.285083 GTGTGCAGGACAAAGTACACA 58.715 47.619 0.00 0.00 46.28 3.72
347 348 2.544267 GTGCAGGACAAAGTACACACTC 59.456 50.000 0.00 0.00 32.29 3.51
353 354 1.488812 ACAAAGTACACACTCAGGCCA 59.511 47.619 5.01 0.00 32.29 5.36
358 359 2.027745 AGTACACACTCAGGCCAATCTG 60.028 50.000 5.01 0.00 36.17 2.90
361 362 2.158623 ACACACTCAGGCCAATCTGAAA 60.159 45.455 5.01 0.00 42.46 2.69
367 368 5.826737 CACTCAGGCCAATCTGAAATATTCT 59.173 40.000 5.01 0.00 42.46 2.40
389 390 3.581101 AGTGCCTCCTCTGAAGCATATA 58.419 45.455 0.00 0.00 39.97 0.86
391 392 4.596643 AGTGCCTCCTCTGAAGCATATATT 59.403 41.667 0.00 0.00 39.97 1.28
418 419 8.933653 TGGTATTAACTCTGTCCATAATCATCA 58.066 33.333 0.00 0.00 0.00 3.07
428 429 5.242171 TGTCCATAATCATCATCCATGCAAC 59.758 40.000 0.00 0.00 31.70 4.17
436 437 4.281435 TCATCATCCATGCAACAACTTTGT 59.719 37.500 0.00 0.00 36.22 2.83
482 483 7.270832 TCCATACCCAGGATAATAAAGGATG 57.729 40.000 0.00 0.00 0.00 3.51
588 589 7.681598 TCATCCATATTCTGAAGGTGGATAGAT 59.318 37.037 26.00 12.32 45.36 1.98
597 598 8.553085 TCTGAAGGTGGATAGATGAGAAAATA 57.447 34.615 0.00 0.00 0.00 1.40
624 625 7.672983 TTTAATCTGCTACAACTCCTGAAAG 57.327 36.000 0.00 0.00 0.00 2.62
650 653 5.123502 GCATATCAGACATAGGCAAATGGAG 59.876 44.000 5.07 0.00 32.26 3.86
653 656 2.617308 CAGACATAGGCAAATGGAGCAG 59.383 50.000 5.07 0.00 0.00 4.24
752 755 2.378038 ACACAGTTGCAAAGGTGTGAT 58.622 42.857 30.21 18.32 42.00 3.06
765 768 5.359194 AAGGTGTGATAGAGTTACCATGG 57.641 43.478 11.19 11.19 33.88 3.66
775 778 3.333680 AGAGTTACCATGGTTCCATTGGT 59.666 43.478 25.38 20.67 34.62 3.67
800 803 8.119226 GTCATTCCAGAAAAGAGAAATATCACG 58.881 37.037 0.00 0.00 0.00 4.35
801 804 8.040727 TCATTCCAGAAAAGAGAAATATCACGA 58.959 33.333 0.00 0.00 0.00 4.35
802 805 8.668353 CATTCCAGAAAAGAGAAATATCACGAA 58.332 33.333 0.00 0.00 0.00 3.85
803 806 8.615878 TTCCAGAAAAGAGAAATATCACGAAA 57.384 30.769 0.00 0.00 0.00 3.46
804 807 8.256611 TCCAGAAAAGAGAAATATCACGAAAG 57.743 34.615 0.00 0.00 0.00 2.62
805 808 6.963805 CCAGAAAAGAGAAATATCACGAAAGC 59.036 38.462 0.00 0.00 0.00 3.51
806 809 7.148340 CCAGAAAAGAGAAATATCACGAAAGCT 60.148 37.037 0.00 0.00 0.00 3.74
807 810 8.873830 CAGAAAAGAGAAATATCACGAAAGCTA 58.126 33.333 0.00 0.00 0.00 3.32
808 811 9.436957 AGAAAAGAGAAATATCACGAAAGCTAA 57.563 29.630 0.00 0.00 0.00 3.09
809 812 9.479278 GAAAAGAGAAATATCACGAAAGCTAAC 57.521 33.333 0.00 0.00 0.00 2.34
810 813 7.541122 AAGAGAAATATCACGAAAGCTAACC 57.459 36.000 0.00 0.00 0.00 2.85
811 814 6.640518 AGAGAAATATCACGAAAGCTAACCA 58.359 36.000 0.00 0.00 0.00 3.67
812 815 7.275920 AGAGAAATATCACGAAAGCTAACCAT 58.724 34.615 0.00 0.00 0.00 3.55
813 816 8.421784 AGAGAAATATCACGAAAGCTAACCATA 58.578 33.333 0.00 0.00 0.00 2.74
814 817 8.594881 AGAAATATCACGAAAGCTAACCATAG 57.405 34.615 0.00 0.00 0.00 2.23
815 818 8.204836 AGAAATATCACGAAAGCTAACCATAGT 58.795 33.333 0.00 0.00 0.00 2.12
816 819 8.732746 AAATATCACGAAAGCTAACCATAGTT 57.267 30.769 0.00 0.00 40.15 2.24
817 820 7.948278 ATATCACGAAAGCTAACCATAGTTC 57.052 36.000 0.00 0.00 37.42 3.01
818 821 5.401531 TCACGAAAGCTAACCATAGTTCT 57.598 39.130 0.00 0.00 37.42 3.01
819 822 5.790593 TCACGAAAGCTAACCATAGTTCTT 58.209 37.500 0.00 0.00 37.42 2.52
820 823 5.867716 TCACGAAAGCTAACCATAGTTCTTC 59.132 40.000 0.00 0.00 37.42 2.87
821 824 5.869888 CACGAAAGCTAACCATAGTTCTTCT 59.130 40.000 0.00 0.00 37.42 2.85
822 825 6.369065 CACGAAAGCTAACCATAGTTCTTCTT 59.631 38.462 0.00 0.00 37.42 2.52
823 826 6.935208 ACGAAAGCTAACCATAGTTCTTCTTT 59.065 34.615 0.00 0.00 37.42 2.52
824 827 7.444487 ACGAAAGCTAACCATAGTTCTTCTTTT 59.556 33.333 0.00 0.00 37.42 2.27
833 836 3.244887 AGTTCTTCTTTTTCCCCTGGG 57.755 47.619 5.50 5.50 0.00 4.45
858 861 3.622455 CGCCTAGGATTTCCTTTCCTTGT 60.622 47.826 14.75 0.00 46.09 3.16
870 873 1.827399 TTCCTTGTGGCGACTCCCTC 61.827 60.000 0.00 0.00 0.00 4.30
871 874 2.125912 CTTGTGGCGACTCCCTCG 60.126 66.667 0.00 0.00 45.97 4.63
886 889 1.135460 CCCTCGTCGTAAGTTCACCTC 60.135 57.143 0.00 0.00 39.48 3.85
893 896 0.600057 GTAAGTTCACCTCGTCCCGT 59.400 55.000 0.00 0.00 0.00 5.28
894 897 0.883833 TAAGTTCACCTCGTCCCGTC 59.116 55.000 0.00 0.00 0.00 4.79
904 907 4.267503 GTCCCGTCGATCCTCGCC 62.268 72.222 0.00 0.00 40.21 5.54
910 913 1.065928 GTCGATCCTCGCCGTGATT 59.934 57.895 0.00 0.00 40.21 2.57
916 919 0.681887 TCCTCGCCGTGATTCCTACA 60.682 55.000 0.00 0.00 0.00 2.74
920 923 1.754803 TCGCCGTGATTCCTACAGATT 59.245 47.619 0.00 0.00 0.00 2.40
925 928 3.865745 CCGTGATTCCTACAGATTGTGAC 59.134 47.826 0.00 0.00 0.00 3.67
933 936 3.452264 CCTACAGATTGTGACTCCCATCA 59.548 47.826 0.00 0.00 0.00 3.07
937 940 4.019051 ACAGATTGTGACTCCCATCAATCA 60.019 41.667 15.64 0.00 41.00 2.57
966 970 0.666274 TAAGTCTTGCGCGTCTGTGG 60.666 55.000 8.43 0.00 0.00 4.17
971 975 2.443957 CTTGCGCGTCTGTGGGTTTC 62.444 60.000 8.43 0.00 0.00 2.78
973 977 2.280524 CGCGTCTGTGGGTTTCCA 60.281 61.111 0.00 0.00 41.58 3.53
981 985 4.889807 TGGGTTTCCACTGTTCCG 57.110 55.556 0.00 0.00 38.32 4.30
984 988 1.489649 TGGGTTTCCACTGTTCCGTTA 59.510 47.619 0.00 0.00 38.32 3.18
988 992 0.104487 TTCCACTGTTCCGTTACGCA 59.896 50.000 0.00 0.00 0.00 5.24
992 996 0.606604 ACTGTTCCGTTACGCATCCT 59.393 50.000 0.00 0.00 0.00 3.24
993 997 1.278238 CTGTTCCGTTACGCATCCTC 58.722 55.000 0.00 0.00 0.00 3.71
1009 1013 1.141881 CTCGTTCCCATGGAGACGG 59.858 63.158 28.00 19.26 37.09 4.79
1035 1039 2.381911 GATGCACAATCCTCCAACCAT 58.618 47.619 0.00 0.00 0.00 3.55
1052 1056 2.143419 ATGGCGGATCTCAGGGTCC 61.143 63.158 0.00 0.00 0.00 4.46
1069 1073 1.664017 CCTGCCGCTGATGATCTCG 60.664 63.158 0.00 0.00 0.00 4.04
1074 1078 1.742146 CGCTGATGATCTCGGGGAA 59.258 57.895 10.55 0.00 44.06 3.97
1075 1079 0.319728 CGCTGATGATCTCGGGGAAT 59.680 55.000 10.55 0.00 44.06 3.01
1077 1081 2.149578 GCTGATGATCTCGGGGAATTG 58.850 52.381 0.00 0.00 0.00 2.32
1081 1085 2.309528 TGATCTCGGGGAATTGTTCG 57.690 50.000 0.00 0.00 0.00 3.95
1087 1091 1.621814 TCGGGGAATTGTTCGAGAAGT 59.378 47.619 0.00 0.00 0.00 3.01
1123 1127 3.181475 GGAGGAGCTTGATGATGTCGTTA 60.181 47.826 0.00 0.00 0.00 3.18
1132 1136 6.510799 GCTTGATGATGTCGTTATTGAGGAAG 60.511 42.308 0.00 0.00 0.00 3.46
1136 1140 6.037786 TGATGTCGTTATTGAGGAAGAAGT 57.962 37.500 0.00 0.00 0.00 3.01
1161 1165 3.430929 CCGATCTCTTGGAGGAAATTCGT 60.431 47.826 0.00 0.00 0.00 3.85
1168 1172 2.593026 TGGAGGAAATTCGTTGGCTTT 58.407 42.857 0.00 0.00 0.00 3.51
1208 1212 2.029918 CCACCAAGAACTTTAGCCAAGC 60.030 50.000 0.00 0.00 35.65 4.01
1220 1224 3.127533 CCAAGCCGCCTTCTTCCG 61.128 66.667 0.00 0.00 0.00 4.30
1231 1235 2.924454 GCCTTCTTCCGAGATATGCGAG 60.924 54.545 0.00 0.00 0.00 5.03
1238 1242 1.735920 GAGATATGCGAGCGGCCTG 60.736 63.158 0.00 0.00 42.61 4.85
1246 1250 2.038690 CGAGCGGCCTGGAATACTA 58.961 57.895 0.00 0.00 0.00 1.82
1254 1258 1.474498 GCCTGGAATACTACCCAACCG 60.474 57.143 0.00 0.00 31.11 4.44
1303 1307 1.134220 TGTTCGTTGTCCAAGCCTCTT 60.134 47.619 0.00 0.00 0.00 2.85
1317 1321 1.180029 CCTCTTGCCTTGGTGATTGG 58.820 55.000 0.00 0.00 0.00 3.16
1319 1323 0.899717 TCTTGCCTTGGTGATTGGGC 60.900 55.000 0.00 0.00 44.31 5.36
1321 1325 0.471591 TTGCCTTGGTGATTGGGCTT 60.472 50.000 0.00 0.00 44.36 4.35
1330 1334 3.290710 GGTGATTGGGCTTGTATGATGT 58.709 45.455 0.00 0.00 0.00 3.06
1331 1335 3.701040 GGTGATTGGGCTTGTATGATGTT 59.299 43.478 0.00 0.00 0.00 2.71
1340 1344 3.624777 CTTGTATGATGTTTCAGGGGCT 58.375 45.455 0.00 0.00 34.73 5.19
1350 1354 2.492088 GTTTCAGGGGCTATGGTTGTTC 59.508 50.000 0.00 0.00 0.00 3.18
1371 1375 1.868997 CAACTTGGCGGTGCTACTG 59.131 57.895 0.00 0.00 0.00 2.74
1413 1417 6.727824 ATGAACTCCGATGAAGTGTTAAAG 57.272 37.500 0.00 0.00 0.00 1.85
1423 1427 7.657354 CCGATGAAGTGTTAAAGATCCATATGA 59.343 37.037 3.65 0.00 0.00 2.15
1448 1452 3.153919 TCTGGCTACAAATCCACAAACC 58.846 45.455 0.00 0.00 0.00 3.27
1472 1476 5.437060 GCCTGATGGTTATTGTAGAAAGGA 58.563 41.667 0.00 0.00 35.27 3.36
1492 1496 3.389329 GGATATGGTGGAGAAGCTTCTGA 59.611 47.826 33.07 16.45 37.73 3.27
1500 1504 2.350868 GGAGAAGCTTCTGAAAAACGCC 60.351 50.000 33.07 20.28 37.73 5.68
1516 1520 1.743252 GCCGGAGAAGTGCTGGAAG 60.743 63.158 5.05 0.00 33.45 3.46
1518 1522 0.035458 CCGGAGAAGTGCTGGAAGTT 59.965 55.000 0.00 0.00 35.30 2.66
1520 1524 2.611518 CGGAGAAGTGCTGGAAGTTAG 58.388 52.381 0.00 0.00 35.30 2.34
1529 1533 2.280628 GCTGGAAGTTAGAATCACCGG 58.719 52.381 0.00 0.00 35.30 5.28
1540 1544 1.488705 AATCACCGGCAACTCCAGGA 61.489 55.000 0.00 0.00 34.18 3.86
1541 1545 1.488705 ATCACCGGCAACTCCAGGAA 61.489 55.000 0.00 0.00 34.18 3.36
1558 1562 7.071698 ACTCCAGGAATGATTACATCTATGTGT 59.928 37.037 5.85 0.00 41.89 3.72
1566 1570 7.832503 TGATTACATCTATGTGTGTGTCAAG 57.167 36.000 5.85 0.00 41.89 3.02
1583 1587 3.755378 GTCAAGCATGATGTGAGGAAACT 59.245 43.478 0.00 0.00 40.35 2.66
1587 1591 4.660168 AGCATGATGTGAGGAAACTTCTT 58.340 39.130 0.00 0.00 44.43 2.52
1596 1600 9.750125 GATGTGAGGAAACTTCTTACAAAATTT 57.250 29.630 0.00 0.00 44.43 1.82
1619 1623 8.514330 TTTGTAAGTGTGGTGAAATCTAAAGT 57.486 30.769 0.00 0.00 0.00 2.66
1634 1638 4.679662 TCTAAAGTACGCAAGGTCTATGC 58.320 43.478 0.00 0.00 46.39 3.14
1637 1641 0.931005 GTACGCAAGGTCTATGCTGC 59.069 55.000 0.00 0.00 41.64 5.25
1664 1668 7.830739 AGGTATGAAAAATTAGCAAGGTTCTG 58.169 34.615 0.00 0.00 0.00 3.02
1670 1674 2.656947 TTAGCAAGGTTCTGCAAGGT 57.343 45.000 0.00 0.00 45.18 3.50
1671 1675 1.896220 TAGCAAGGTTCTGCAAGGTG 58.104 50.000 0.00 0.00 45.18 4.00
1677 1681 0.751643 GGTTCTGCAAGGTGTGTGGT 60.752 55.000 0.00 0.00 0.00 4.16
1678 1682 0.381801 GTTCTGCAAGGTGTGTGGTG 59.618 55.000 0.00 0.00 0.00 4.17
1703 1707 1.893137 AGGACATGAGCACAACGAGTA 59.107 47.619 0.00 0.00 0.00 2.59
1721 1725 2.027285 AGTATGGCAATGGGGTTTTTGC 60.027 45.455 0.00 0.00 45.82 3.68
1764 1768 8.727100 TTGGTGACTATCTATATGATGAACCT 57.273 34.615 0.00 0.00 36.65 3.50
1773 1777 2.604046 ATGATGAACCTCCAGTACGC 57.396 50.000 0.00 0.00 0.00 4.42
1836 1840 3.745546 CCTGATCTGAAGGGGGCA 58.254 61.111 0.38 0.00 0.00 5.36
1837 1841 2.001803 CCTGATCTGAAGGGGGCAA 58.998 57.895 0.38 0.00 0.00 4.52
1838 1842 0.332632 CCTGATCTGAAGGGGGCAAA 59.667 55.000 0.38 0.00 0.00 3.68
1885 1889 3.041946 ACTGTAGATGGGGGTCTGAATC 58.958 50.000 0.00 0.00 0.00 2.52
1891 1895 3.649981 AGATGGGGGTCTGAATCATACTG 59.350 47.826 0.00 0.00 0.00 2.74
1901 1905 3.689347 TGAATCATACTGCAACAAGCCT 58.311 40.909 0.00 0.00 44.83 4.58
1907 1911 4.824537 TCATACTGCAACAAGCCTTGTAAA 59.175 37.500 11.10 0.00 44.59 2.01
1938 1942 1.738474 TGGCTGATATGGAGCTGGAT 58.262 50.000 0.00 0.00 36.63 3.41
1959 1963 6.358178 GGATAGATCATCCCGTAGACATCTA 58.642 44.000 11.19 0.00 46.85 1.98
1963 1967 7.164230 AGATCATCCCGTAGACATCTAAATC 57.836 40.000 0.00 0.00 29.32 2.17
1983 1987 9.434420 CTAAATCTGGATGATATTTCAGAGGTC 57.566 37.037 0.00 0.00 39.26 3.85
1990 1995 7.337689 TGGATGATATTTCAGAGGTCAAAACAG 59.662 37.037 0.00 0.00 34.73 3.16
2013 2018 2.004583 CAGCAAATGCAGTCAATGGG 57.995 50.000 8.28 0.00 45.16 4.00
2015 2020 0.108041 GCAAATGCAGTCAATGGGGG 60.108 55.000 0.00 0.00 41.59 5.40
2022 2027 3.119319 TGCAGTCAATGGGGGTAATCTA 58.881 45.455 0.00 0.00 0.00 1.98
2037 2042 5.811100 GGGTAATCTACTGCTGTTAACTGAC 59.189 44.000 15.89 8.00 0.00 3.51
2038 2043 6.395629 GGTAATCTACTGCTGTTAACTGACA 58.604 40.000 15.89 11.59 0.00 3.58
2053 2058 3.146066 ACTGACAGCAAAGCGGATAAAA 58.854 40.909 1.25 0.00 0.00 1.52
2072 2077 7.148272 GGATAAAATAGCTGATGATGCTTCTCC 60.148 40.741 0.00 0.00 41.46 3.71
2073 2078 2.808523 TAGCTGATGATGCTTCTCCG 57.191 50.000 0.00 0.00 41.46 4.63
2084 2089 1.336887 TGCTTCTCCGTGTTCTAGCAC 60.337 52.381 0.00 0.00 34.05 4.40
2123 2128 2.028294 AGCATGATAGCGAGGATTCAGG 60.028 50.000 0.00 0.00 40.15 3.86
2130 2135 2.741145 AGCGAGGATTCAGGTTCTACT 58.259 47.619 0.00 0.00 0.00 2.57
2136 2141 6.461788 GCGAGGATTCAGGTTCTACTAATCTT 60.462 42.308 0.00 0.00 0.00 2.40
2137 2142 7.493367 CGAGGATTCAGGTTCTACTAATCTTT 58.507 38.462 0.00 0.00 0.00 2.52
2143 2148 5.068723 TCAGGTTCTACTAATCTTTAGGCGG 59.931 44.000 0.00 0.00 0.00 6.13
2222 2229 1.070786 GGAACCGCTGGACAGTTCA 59.929 57.895 0.82 0.00 41.32 3.18
2226 2233 0.468226 ACCGCTGGACAGTTCAAGAA 59.532 50.000 0.82 0.00 0.00 2.52
2254 2261 1.897802 CTCTTGCAAAAGCCCATTCCT 59.102 47.619 0.00 0.00 0.00 3.36
2255 2262 2.301009 CTCTTGCAAAAGCCCATTCCTT 59.699 45.455 0.00 0.00 0.00 3.36
2269 2276 2.833631 TTCCTTGAGGTTCGTCTTCC 57.166 50.000 0.00 0.00 36.34 3.46
2280 2287 2.417339 TCGTCTTCCTGTCTGAAACG 57.583 50.000 0.00 0.00 0.00 3.60
2288 2295 1.734465 CCTGTCTGAAACGAGGCAATC 59.266 52.381 0.00 0.00 0.00 2.67
2302 2309 1.086696 GCAATCGTCTGCCAAAGCTA 58.913 50.000 0.00 0.00 40.80 3.32
2306 2313 4.737054 CAATCGTCTGCCAAAGCTAAAAT 58.263 39.130 0.00 0.00 40.80 1.82
2330 2337 6.852404 TGATAAAATGGAAGCTAGGCCTAAT 58.148 36.000 14.85 2.30 0.00 1.73
2336 2343 4.823107 TGGAAGCTAGGCCTAATAGGTTA 58.177 43.478 16.52 2.09 40.16 2.85
2337 2344 5.221303 TGGAAGCTAGGCCTAATAGGTTAA 58.779 41.667 16.52 7.37 40.16 2.01
2339 2346 6.174049 GGAAGCTAGGCCTAATAGGTTAATG 58.826 44.000 16.52 1.71 40.16 1.90
2356 2363 5.920273 GGTTAATGTGGTGTTGATTGTGAAG 59.080 40.000 0.00 0.00 0.00 3.02
2358 2365 1.680735 TGTGGTGTTGATTGTGAAGGC 59.319 47.619 0.00 0.00 0.00 4.35
2366 2373 1.648467 GATTGTGAAGGCCGTGGAGC 61.648 60.000 0.00 0.00 0.00 4.70
2377 2384 2.908015 GTGGAGCGGGATTGGCTA 59.092 61.111 0.00 0.00 41.72 3.93
2378 2385 1.523938 GTGGAGCGGGATTGGCTAC 60.524 63.158 0.00 0.00 41.72 3.58
2379 2386 2.280186 GGAGCGGGATTGGCTACG 60.280 66.667 0.00 0.00 41.72 3.51
2383 2391 0.322187 AGCGGGATTGGCTACGTTTT 60.322 50.000 0.00 0.00 39.39 2.43
2404 2412 0.902531 GGACGATTCCCTCCAAGTGA 59.097 55.000 0.00 0.00 35.57 3.41
2407 2415 1.697432 ACGATTCCCTCCAAGTGACAA 59.303 47.619 0.00 0.00 0.00 3.18
2425 2433 4.994217 TGACAATACTTGATTCGTGCAAGA 59.006 37.500 17.03 0.00 44.16 3.02
2437 2445 9.927668 TTGATTCGTGCAAGAGATATATTGATA 57.072 29.630 1.81 0.00 0.00 2.15
2442 2450 7.704047 TCGTGCAAGAGATATATTGATATGAGC 59.296 37.037 0.00 0.00 0.00 4.26
2483 2492 5.221048 CGGAAAGTCATGGAGAACAACTTTT 60.221 40.000 7.59 0.00 39.55 2.27
2484 2493 5.979517 GGAAAGTCATGGAGAACAACTTTTG 59.020 40.000 7.59 0.00 39.55 2.44
2492 2501 5.690865 TGGAGAACAACTTTTGTCTATGGT 58.309 37.500 0.00 0.00 44.59 3.55
2499 2508 4.373156 ACTTTTGTCTATGGTGAGCCTT 57.627 40.909 0.00 0.00 35.27 4.35
2536 2545 0.882042 CGCATGTGGGATCACCTAGC 60.882 60.000 0.00 0.00 42.98 3.42
2541 2550 2.667470 TGTGGGATCACCTAGCTAGAC 58.333 52.381 22.70 9.87 42.98 2.59
2597 2606 1.467920 GGGACTTCAATGAAGCCCTG 58.532 55.000 30.65 11.36 44.62 4.45
2617 2626 1.198637 GTGGCAGCATGAACACTTCTC 59.801 52.381 0.00 0.00 40.72 2.87
2618 2627 1.202794 TGGCAGCATGAACACTTCTCA 60.203 47.619 0.00 0.00 39.69 3.27
2623 2632 4.781071 CAGCATGAACACTTCTCAAGAAC 58.219 43.478 0.00 0.00 39.69 3.01
2626 2635 4.024893 GCATGAACACTTCTCAAGAACGAA 60.025 41.667 0.00 0.00 0.00 3.85
2629 2638 3.536956 ACACTTCTCAAGAACGAACCA 57.463 42.857 0.00 0.00 0.00 3.67
2632 2641 5.230942 ACACTTCTCAAGAACGAACCATAG 58.769 41.667 0.00 0.00 0.00 2.23
2646 2655 5.171476 CGAACCATAGTGAAAGTCAGATGT 58.829 41.667 0.00 0.00 0.00 3.06
2650 2659 6.644347 ACCATAGTGAAAGTCAGATGTAAGG 58.356 40.000 0.00 0.00 0.00 2.69
2659 2668 8.647796 TGAAAGTCAGATGTAAGGTTTTAGAGA 58.352 33.333 0.00 0.00 0.00 3.10
2690 2699 3.851098 AGTTTGTGAGCTTACGGATCTC 58.149 45.455 3.97 0.00 0.00 2.75
2698 2707 2.496470 AGCTTACGGATCTCGGTTTCTT 59.504 45.455 8.20 0.00 44.45 2.52
2699 2708 2.858941 GCTTACGGATCTCGGTTTCTTC 59.141 50.000 8.20 0.00 44.45 2.87
2701 2710 0.172803 ACGGATCTCGGTTTCTTCGG 59.827 55.000 8.20 0.00 44.45 4.30
2705 2714 1.550130 ATCTCGGTTTCTTCGGGGCA 61.550 55.000 0.00 0.00 0.00 5.36
2706 2715 2.031465 TCGGTTTCTTCGGGGCAC 59.969 61.111 0.00 0.00 0.00 5.01
2736 2745 0.258484 TGATAATGGCCAGTGGGGTG 59.742 55.000 17.71 0.00 39.65 4.61
2744 2753 0.608308 GCCAGTGGGGTGAAGGTAAC 60.608 60.000 12.15 0.00 39.65 2.50
2749 2758 1.129917 TGGGGTGAAGGTAACGTTCA 58.870 50.000 2.82 0.00 46.39 3.18
2753 2762 2.740447 GGGTGAAGGTAACGTTCATGTC 59.260 50.000 2.82 0.00 46.39 3.06
2771 2780 0.393944 TCCGACTAGACCGAGCATGT 60.394 55.000 0.00 0.00 0.00 3.21
2788 2797 4.845387 GCATGTGCTAATGATGACTGAAG 58.155 43.478 0.00 0.00 38.21 3.02
2798 2807 6.981762 AATGATGACTGAAGAGACATGTTC 57.018 37.500 0.00 0.00 35.13 3.18
2801 2810 2.972021 TGACTGAAGAGACATGTTCCCA 59.028 45.455 0.00 1.16 0.00 4.37
2839 2848 1.152631 TGGTCTCACCACACTCGGA 60.153 57.895 0.00 0.00 44.79 4.55
2849 2858 3.314331 CACTCGGACCACTGCCCT 61.314 66.667 0.00 0.00 0.00 5.19
2867 2876 2.082231 CCTCTTCTGTTGCATGTGGAG 58.918 52.381 0.00 0.00 0.00 3.86
2872 2881 1.421268 TCTGTTGCATGTGGAGGAAGT 59.579 47.619 0.00 0.00 0.00 3.01
2885 2894 3.581332 TGGAGGAAGTTGAGGATAAACGT 59.419 43.478 0.00 0.00 0.00 3.99
2886 2895 4.773674 TGGAGGAAGTTGAGGATAAACGTA 59.226 41.667 0.00 0.00 0.00 3.57
2913 2922 9.457436 GTAAGGGAAGTCCAAAGTATGAAATAA 57.543 33.333 0.00 0.00 38.24 1.40
2926 2935 3.342377 TGAAATAATGTGGGAGCGTGA 57.658 42.857 0.00 0.00 0.00 4.35
2927 2936 3.884895 TGAAATAATGTGGGAGCGTGAT 58.115 40.909 0.00 0.00 0.00 3.06
2928 2937 3.876914 TGAAATAATGTGGGAGCGTGATC 59.123 43.478 0.00 0.00 0.00 2.92
2929 2938 3.558931 AATAATGTGGGAGCGTGATCA 57.441 42.857 0.00 0.00 0.00 2.92
2930 2939 3.777106 ATAATGTGGGAGCGTGATCAT 57.223 42.857 0.00 0.00 0.00 2.45
2931 2940 4.890158 ATAATGTGGGAGCGTGATCATA 57.110 40.909 0.00 0.00 0.00 2.15
2932 2941 3.558931 AATGTGGGAGCGTGATCATAA 57.441 42.857 0.00 0.00 0.00 1.90
2933 2942 3.558931 ATGTGGGAGCGTGATCATAAA 57.441 42.857 0.00 0.00 0.00 1.40
2934 2943 2.627945 TGTGGGAGCGTGATCATAAAC 58.372 47.619 0.00 0.00 0.00 2.01
2935 2944 2.236146 TGTGGGAGCGTGATCATAAACT 59.764 45.455 0.00 0.00 0.00 2.66
2936 2945 3.449377 TGTGGGAGCGTGATCATAAACTA 59.551 43.478 0.00 0.00 0.00 2.24
2937 2946 3.802685 GTGGGAGCGTGATCATAAACTAC 59.197 47.826 0.00 0.00 0.00 2.73
2938 2947 3.449377 TGGGAGCGTGATCATAAACTACA 59.551 43.478 0.00 0.00 0.00 2.74
2939 2948 4.051922 GGGAGCGTGATCATAAACTACAG 58.948 47.826 0.00 0.00 0.00 2.74
2940 2949 4.051922 GGAGCGTGATCATAAACTACAGG 58.948 47.826 0.00 0.00 0.00 4.00
2941 2950 4.202121 GGAGCGTGATCATAAACTACAGGA 60.202 45.833 0.00 0.00 0.00 3.86
2942 2951 4.938080 AGCGTGATCATAAACTACAGGAG 58.062 43.478 0.00 0.00 0.00 3.69
2943 2952 4.051922 GCGTGATCATAAACTACAGGAGG 58.948 47.826 0.00 0.00 0.00 4.30
2944 2953 4.441634 GCGTGATCATAAACTACAGGAGGT 60.442 45.833 0.00 0.00 0.00 3.85
2945 2954 5.043903 CGTGATCATAAACTACAGGAGGTG 58.956 45.833 0.00 0.00 0.00 4.00
2946 2955 5.163550 CGTGATCATAAACTACAGGAGGTGA 60.164 44.000 0.00 0.00 0.00 4.02
2947 2956 6.461648 CGTGATCATAAACTACAGGAGGTGAT 60.462 42.308 0.00 0.00 0.00 3.06
2948 2957 7.275920 GTGATCATAAACTACAGGAGGTGATT 58.724 38.462 0.00 0.00 0.00 2.57
2949 2958 7.770897 GTGATCATAAACTACAGGAGGTGATTT 59.229 37.037 0.00 0.00 0.00 2.17
2950 2959 7.987458 TGATCATAAACTACAGGAGGTGATTTC 59.013 37.037 0.00 0.00 0.00 2.17
2951 2960 6.338146 TCATAAACTACAGGAGGTGATTTCG 58.662 40.000 0.00 0.00 0.00 3.46
2952 2961 4.884668 AAACTACAGGAGGTGATTTCGA 57.115 40.909 0.00 0.00 0.00 3.71
2953 2962 4.457834 AACTACAGGAGGTGATTTCGAG 57.542 45.455 0.00 0.00 0.00 4.04
2954 2963 2.761208 ACTACAGGAGGTGATTTCGAGG 59.239 50.000 0.00 0.00 0.00 4.63
2955 2964 0.905357 ACAGGAGGTGATTTCGAGGG 59.095 55.000 0.00 0.00 0.00 4.30
2956 2965 0.462759 CAGGAGGTGATTTCGAGGGC 60.463 60.000 0.00 0.00 0.00 5.19
2957 2966 1.521681 GGAGGTGATTTCGAGGGCG 60.522 63.158 0.00 0.00 39.35 6.13
2958 2967 1.218316 GAGGTGATTTCGAGGGCGT 59.782 57.895 0.00 0.00 38.98 5.68
2959 2968 1.079127 AGGTGATTTCGAGGGCGTG 60.079 57.895 0.00 0.00 38.98 5.34
2960 2969 1.079405 GGTGATTTCGAGGGCGTGA 60.079 57.895 0.00 0.00 38.98 4.35
2961 2970 1.084370 GGTGATTTCGAGGGCGTGAG 61.084 60.000 0.00 0.00 38.98 3.51
2962 2971 0.108804 GTGATTTCGAGGGCGTGAGA 60.109 55.000 0.00 0.00 38.98 3.27
2963 2972 0.824109 TGATTTCGAGGGCGTGAGAT 59.176 50.000 0.00 0.00 38.98 2.75
2964 2973 1.202417 TGATTTCGAGGGCGTGAGATC 60.202 52.381 0.00 0.00 38.98 2.75
2965 2974 0.249073 ATTTCGAGGGCGTGAGATCG 60.249 55.000 0.00 0.00 38.98 3.69
2975 2984 2.650163 GTGAGATCGCACACGTACC 58.350 57.895 22.78 0.00 41.18 3.34
2976 2985 0.109458 GTGAGATCGCACACGTACCA 60.109 55.000 22.78 0.00 41.18 3.25
2977 2986 0.170339 TGAGATCGCACACGTACCAG 59.830 55.000 0.00 0.00 41.18 4.00
2978 2987 0.525668 GAGATCGCACACGTACCAGG 60.526 60.000 0.00 0.00 41.18 4.45
2979 2988 1.518572 GATCGCACACGTACCAGGG 60.519 63.158 0.00 0.00 41.18 4.45
2980 2989 2.901051 GATCGCACACGTACCAGGGG 62.901 65.000 0.00 0.00 41.18 4.79
2983 2992 3.687102 CACACGTACCAGGGGCGA 61.687 66.667 11.27 0.00 0.00 5.54
2984 2993 3.688159 ACACGTACCAGGGGCGAC 61.688 66.667 11.27 0.00 0.00 5.19
2996 3005 2.106332 GGCGACCTATCCACGGTG 59.894 66.667 0.00 0.00 34.19 4.94
2997 3006 2.106332 GCGACCTATCCACGGTGG 59.894 66.667 21.27 21.27 39.43 4.61
2998 3007 2.106332 CGACCTATCCACGGTGGC 59.894 66.667 22.42 6.23 37.47 5.01
2999 3008 2.717044 CGACCTATCCACGGTGGCA 61.717 63.158 22.42 11.59 37.47 4.92
3000 3009 1.600107 GACCTATCCACGGTGGCAA 59.400 57.895 22.42 11.25 37.47 4.52
3001 3010 0.743345 GACCTATCCACGGTGGCAAC 60.743 60.000 22.42 0.00 37.47 4.17
3002 3011 1.451387 CCTATCCACGGTGGCAACC 60.451 63.158 22.42 0.00 43.76 3.77
3003 3012 1.602237 CTATCCACGGTGGCAACCT 59.398 57.895 22.42 6.75 45.17 3.50
3004 3013 0.462047 CTATCCACGGTGGCAACCTC 60.462 60.000 22.42 0.00 45.17 3.85
3005 3014 0.907704 TATCCACGGTGGCAACCTCT 60.908 55.000 22.42 3.48 45.17 3.69
3006 3015 2.185310 ATCCACGGTGGCAACCTCTC 62.185 60.000 22.42 0.00 45.17 3.20
3007 3016 2.743718 CACGGTGGCAACCTCTCT 59.256 61.111 9.09 0.00 45.17 3.10
3008 3017 1.071471 CACGGTGGCAACCTCTCTT 59.929 57.895 9.09 0.00 45.17 2.85
3009 3018 0.951040 CACGGTGGCAACCTCTCTTC 60.951 60.000 9.09 0.00 45.17 2.87
3010 3019 1.738099 CGGTGGCAACCTCTCTTCG 60.738 63.158 9.09 0.00 45.17 3.79
3011 3020 1.371558 GGTGGCAACCTCTCTTCGT 59.628 57.895 1.77 0.00 43.84 3.85
3012 3021 0.951040 GGTGGCAACCTCTCTTCGTG 60.951 60.000 1.77 0.00 43.84 4.35
3013 3022 1.301716 TGGCAACCTCTCTTCGTGC 60.302 57.895 0.00 0.00 0.00 5.34
3014 3023 1.004440 GGCAACCTCTCTTCGTGCT 60.004 57.895 0.00 0.00 0.00 4.40
3015 3024 1.294659 GGCAACCTCTCTTCGTGCTG 61.295 60.000 0.00 0.00 0.00 4.41
3016 3025 0.601311 GCAACCTCTCTTCGTGCTGT 60.601 55.000 0.00 0.00 0.00 4.40
3017 3026 1.423395 CAACCTCTCTTCGTGCTGTC 58.577 55.000 0.00 0.00 0.00 3.51
3018 3027 1.040646 AACCTCTCTTCGTGCTGTCA 58.959 50.000 0.00 0.00 0.00 3.58
3019 3028 1.261480 ACCTCTCTTCGTGCTGTCAT 58.739 50.000 0.00 0.00 0.00 3.06
3020 3029 1.067283 ACCTCTCTTCGTGCTGTCATG 60.067 52.381 0.00 0.00 0.00 3.07
3021 3030 0.997932 CTCTCTTCGTGCTGTCATGC 59.002 55.000 0.00 0.00 0.00 4.06
3022 3031 0.318120 TCTCTTCGTGCTGTCATGCA 59.682 50.000 0.00 0.00 41.05 3.96
3023 3032 1.150827 CTCTTCGTGCTGTCATGCAA 58.849 50.000 0.00 0.00 45.12 4.08
3024 3033 1.128136 CTCTTCGTGCTGTCATGCAAG 59.872 52.381 0.00 0.00 45.12 4.01
3025 3034 1.150827 CTTCGTGCTGTCATGCAAGA 58.849 50.000 0.00 8.15 46.31 3.02
3026 3035 3.304041 TCGTGCTGTCATGCAAGAA 57.696 47.368 0.00 0.00 45.37 2.52
3027 3036 1.812235 TCGTGCTGTCATGCAAGAAT 58.188 45.000 0.00 0.00 45.37 2.40
3028 3037 2.153645 TCGTGCTGTCATGCAAGAATT 58.846 42.857 0.00 0.00 45.37 2.17
3029 3038 3.333804 TCGTGCTGTCATGCAAGAATTA 58.666 40.909 0.00 0.00 45.37 1.40
3030 3039 3.750652 TCGTGCTGTCATGCAAGAATTAA 59.249 39.130 0.00 0.00 45.37 1.40
3031 3040 4.215185 TCGTGCTGTCATGCAAGAATTAAA 59.785 37.500 0.00 0.00 45.37 1.52
3032 3041 4.556135 CGTGCTGTCATGCAAGAATTAAAG 59.444 41.667 0.00 0.00 45.12 1.85
3033 3042 5.617529 CGTGCTGTCATGCAAGAATTAAAGA 60.618 40.000 0.00 0.00 45.12 2.52
3034 3043 6.151691 GTGCTGTCATGCAAGAATTAAAGAA 58.848 36.000 0.00 0.00 45.12 2.52
3035 3044 6.642131 GTGCTGTCATGCAAGAATTAAAGAAA 59.358 34.615 0.00 0.00 45.12 2.52
3036 3045 7.330208 GTGCTGTCATGCAAGAATTAAAGAAAT 59.670 33.333 0.00 0.00 45.12 2.17
3037 3046 7.329962 TGCTGTCATGCAAGAATTAAAGAAATG 59.670 33.333 0.00 0.00 40.29 2.32
3038 3047 7.201496 GCTGTCATGCAAGAATTAAAGAAATGG 60.201 37.037 0.00 0.00 0.00 3.16
3039 3048 7.894708 TGTCATGCAAGAATTAAAGAAATGGA 58.105 30.769 0.00 0.00 0.00 3.41
3040 3049 8.030692 TGTCATGCAAGAATTAAAGAAATGGAG 58.969 33.333 0.00 0.00 0.00 3.86
3041 3050 7.009907 GTCATGCAAGAATTAAAGAAATGGAGC 59.990 37.037 0.00 0.00 0.00 4.70
3042 3051 6.343716 TGCAAGAATTAAAGAAATGGAGCA 57.656 33.333 0.00 0.00 0.00 4.26
3043 3052 6.757237 TGCAAGAATTAAAGAAATGGAGCAA 58.243 32.000 0.00 0.00 0.00 3.91
3044 3053 6.869913 TGCAAGAATTAAAGAAATGGAGCAAG 59.130 34.615 0.00 0.00 0.00 4.01
3045 3054 6.312180 GCAAGAATTAAAGAAATGGAGCAAGG 59.688 38.462 0.00 0.00 0.00 3.61
3046 3055 7.605449 CAAGAATTAAAGAAATGGAGCAAGGA 58.395 34.615 0.00 0.00 0.00 3.36
3047 3056 7.401955 AGAATTAAAGAAATGGAGCAAGGAG 57.598 36.000 0.00 0.00 0.00 3.69
3048 3057 7.177878 AGAATTAAAGAAATGGAGCAAGGAGA 58.822 34.615 0.00 0.00 0.00 3.71
3049 3058 7.671398 AGAATTAAAGAAATGGAGCAAGGAGAA 59.329 33.333 0.00 0.00 0.00 2.87
3050 3059 6.575162 TTAAAGAAATGGAGCAAGGAGAAC 57.425 37.500 0.00 0.00 0.00 3.01
3051 3060 4.379302 AAGAAATGGAGCAAGGAGAACT 57.621 40.909 0.00 0.00 0.00 3.01
3052 3061 4.379302 AGAAATGGAGCAAGGAGAACTT 57.621 40.909 0.00 0.00 41.00 2.66
3053 3062 4.734266 AGAAATGGAGCAAGGAGAACTTT 58.266 39.130 0.00 0.00 37.29 2.66
3054 3063 4.522022 AGAAATGGAGCAAGGAGAACTTTG 59.478 41.667 0.00 0.00 37.29 2.77
3055 3064 2.276732 TGGAGCAAGGAGAACTTTGG 57.723 50.000 0.00 0.00 37.29 3.28
3056 3065 1.774254 TGGAGCAAGGAGAACTTTGGA 59.226 47.619 0.00 0.00 37.29 3.53
3057 3066 2.155279 GGAGCAAGGAGAACTTTGGAC 58.845 52.381 0.00 0.00 37.29 4.02
3058 3067 2.487265 GGAGCAAGGAGAACTTTGGACA 60.487 50.000 0.00 0.00 37.29 4.02
3059 3068 3.416156 GAGCAAGGAGAACTTTGGACAT 58.584 45.455 0.00 0.00 37.29 3.06
3060 3069 3.152341 AGCAAGGAGAACTTTGGACATG 58.848 45.455 0.00 0.00 37.29 3.21
3061 3070 2.887152 GCAAGGAGAACTTTGGACATGT 59.113 45.455 0.00 0.00 37.29 3.21
3062 3071 4.072131 GCAAGGAGAACTTTGGACATGTA 58.928 43.478 0.00 0.00 37.29 2.29
3063 3072 4.083271 GCAAGGAGAACTTTGGACATGTAC 60.083 45.833 0.00 0.00 37.29 2.90
3064 3073 4.974645 AGGAGAACTTTGGACATGTACA 57.025 40.909 6.68 6.68 0.00 2.90
3065 3074 5.304686 AGGAGAACTTTGGACATGTACAA 57.695 39.130 19.85 19.85 0.00 2.41
3066 3075 5.063880 AGGAGAACTTTGGACATGTACAAC 58.936 41.667 23.33 11.70 32.17 3.32
3067 3076 4.819630 GGAGAACTTTGGACATGTACAACA 59.180 41.667 23.33 13.09 32.17 3.33
3068 3077 5.298276 GGAGAACTTTGGACATGTACAACAA 59.702 40.000 23.33 8.98 32.17 2.83
3069 3078 6.131544 AGAACTTTGGACATGTACAACAAC 57.868 37.500 23.33 14.06 32.17 3.32
3070 3079 5.650266 AGAACTTTGGACATGTACAACAACA 59.350 36.000 23.33 7.85 32.17 3.33
3071 3080 5.906113 ACTTTGGACATGTACAACAACAA 57.094 34.783 23.33 7.46 32.17 2.83
3072 3081 6.274157 ACTTTGGACATGTACAACAACAAA 57.726 33.333 23.33 6.72 32.17 2.83
3073 3082 6.872920 ACTTTGGACATGTACAACAACAAAT 58.127 32.000 23.33 0.00 32.17 2.32
3074 3083 8.001881 ACTTTGGACATGTACAACAACAAATA 57.998 30.769 23.33 5.22 32.17 1.40
3075 3084 8.470805 ACTTTGGACATGTACAACAACAAATAA 58.529 29.630 23.33 4.49 32.17 1.40
3076 3085 9.307121 CTTTGGACATGTACAACAACAAATAAA 57.693 29.630 23.33 3.75 32.17 1.40
3077 3086 9.823647 TTTGGACATGTACAACAACAAATAAAT 57.176 25.926 23.33 0.00 32.17 1.40
3093 3102 7.989826 ACAAATAAATATGTTGAGACAGGAGC 58.010 34.615 0.00 0.00 39.58 4.70
3094 3103 7.831193 ACAAATAAATATGTTGAGACAGGAGCT 59.169 33.333 0.00 0.00 39.58 4.09
3095 3104 9.330063 CAAATAAATATGTTGAGACAGGAGCTA 57.670 33.333 0.00 0.00 39.58 3.32
3096 3105 9.553064 AAATAAATATGTTGAGACAGGAGCTAG 57.447 33.333 0.00 0.00 39.58 3.42
3097 3106 6.798427 AAATATGTTGAGACAGGAGCTAGA 57.202 37.500 0.00 0.00 39.58 2.43
3098 3107 6.403866 AATATGTTGAGACAGGAGCTAGAG 57.596 41.667 0.00 0.00 39.58 2.43
3099 3108 3.162147 TGTTGAGACAGGAGCTAGAGT 57.838 47.619 0.00 0.00 0.00 3.24
3100 3109 3.085533 TGTTGAGACAGGAGCTAGAGTC 58.914 50.000 0.00 4.26 0.00 3.36
3101 3110 2.031258 TGAGACAGGAGCTAGAGTCG 57.969 55.000 0.00 0.00 36.18 4.18
3102 3111 0.661020 GAGACAGGAGCTAGAGTCGC 59.339 60.000 0.00 0.00 36.18 5.19
3103 3112 0.254747 AGACAGGAGCTAGAGTCGCT 59.745 55.000 0.00 0.00 41.15 4.93
3104 3113 0.380378 GACAGGAGCTAGAGTCGCTG 59.620 60.000 0.00 2.30 37.96 5.18
3105 3114 1.065600 CAGGAGCTAGAGTCGCTGC 59.934 63.158 3.79 3.79 44.89 5.25
3106 3115 1.379176 AGGAGCTAGAGTCGCTGCA 60.379 57.895 12.67 0.00 46.64 4.41
3107 3116 0.967887 AGGAGCTAGAGTCGCTGCAA 60.968 55.000 12.67 0.00 46.64 4.08
3108 3117 0.804156 GGAGCTAGAGTCGCTGCAAC 60.804 60.000 6.65 0.00 44.10 4.17
3109 3118 0.172352 GAGCTAGAGTCGCTGCAACT 59.828 55.000 0.00 0.00 37.96 3.16
3110 3119 0.605589 AGCTAGAGTCGCTGCAACTT 59.394 50.000 0.00 0.00 36.15 2.66
3111 3120 1.001406 AGCTAGAGTCGCTGCAACTTT 59.999 47.619 0.00 0.00 36.15 2.66
3112 3121 1.391826 GCTAGAGTCGCTGCAACTTTC 59.608 52.381 0.00 0.00 0.00 2.62
3113 3122 2.928731 GCTAGAGTCGCTGCAACTTTCT 60.929 50.000 0.00 0.00 0.00 2.52
3114 3123 2.246719 AGAGTCGCTGCAACTTTCTT 57.753 45.000 0.00 0.00 0.00 2.52
3115 3124 1.869767 AGAGTCGCTGCAACTTTCTTG 59.130 47.619 0.00 0.00 0.00 3.02
3116 3125 1.599542 GAGTCGCTGCAACTTTCTTGT 59.400 47.619 0.00 0.00 0.00 3.16
3117 3126 2.800544 GAGTCGCTGCAACTTTCTTGTA 59.199 45.455 0.00 0.00 0.00 2.41
3118 3127 2.802816 AGTCGCTGCAACTTTCTTGTAG 59.197 45.455 0.00 0.00 35.63 2.74
3119 3128 2.544267 GTCGCTGCAACTTTCTTGTAGT 59.456 45.455 0.00 0.00 35.10 2.73
3120 3129 2.543848 TCGCTGCAACTTTCTTGTAGTG 59.456 45.455 0.00 5.63 41.72 2.74
3121 3130 2.543848 CGCTGCAACTTTCTTGTAGTGA 59.456 45.455 0.00 0.00 42.54 3.41
3122 3131 3.604772 CGCTGCAACTTTCTTGTAGTGAC 60.605 47.826 0.00 0.00 42.54 3.67
3123 3132 3.304057 GCTGCAACTTTCTTGTAGTGACC 60.304 47.826 0.00 0.00 35.10 4.02
3124 3133 2.869801 TGCAACTTTCTTGTAGTGACCG 59.130 45.455 0.00 0.00 0.00 4.79
3125 3134 2.870411 GCAACTTTCTTGTAGTGACCGT 59.130 45.455 0.00 0.00 0.00 4.83
3126 3135 3.059800 GCAACTTTCTTGTAGTGACCGTC 60.060 47.826 0.00 0.00 0.00 4.79
3127 3136 4.369182 CAACTTTCTTGTAGTGACCGTCT 58.631 43.478 0.00 0.00 0.00 4.18
3128 3137 3.978687 ACTTTCTTGTAGTGACCGTCTG 58.021 45.455 0.00 0.00 0.00 3.51
3129 3138 3.383825 ACTTTCTTGTAGTGACCGTCTGT 59.616 43.478 0.00 0.00 0.00 3.41
3130 3139 4.142004 ACTTTCTTGTAGTGACCGTCTGTT 60.142 41.667 0.00 0.00 0.00 3.16
3131 3140 3.364889 TCTTGTAGTGACCGTCTGTTG 57.635 47.619 0.00 0.00 0.00 3.33
3132 3141 2.953648 TCTTGTAGTGACCGTCTGTTGA 59.046 45.455 0.00 0.00 0.00 3.18
3133 3142 3.572682 TCTTGTAGTGACCGTCTGTTGAT 59.427 43.478 0.00 0.00 0.00 2.57
3134 3143 3.570926 TGTAGTGACCGTCTGTTGATC 57.429 47.619 0.00 0.00 0.00 2.92
3135 3144 2.888414 TGTAGTGACCGTCTGTTGATCA 59.112 45.455 0.00 0.00 0.00 2.92
3136 3145 2.732412 AGTGACCGTCTGTTGATCAG 57.268 50.000 0.00 0.00 44.85 2.90
3137 3146 1.273606 AGTGACCGTCTGTTGATCAGG 59.726 52.381 0.00 0.00 43.76 3.86
3138 3147 0.037326 TGACCGTCTGTTGATCAGGC 60.037 55.000 0.00 0.00 44.48 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.099454 GACTTAATTAGATGGGTAACTCACTTG 57.901 37.037 0.00 0.00 0.00 3.16
39 40 6.035327 CACTGCTTGCTTATTGAATTAAAGCC 59.965 38.462 9.47 0.00 43.93 4.35
51 52 3.012518 GGACATGTCACTGCTTGCTTAT 58.987 45.455 26.47 0.00 0.00 1.73
89 90 5.880901 AGAGACCTTCTTTTGCTAAATGGA 58.119 37.500 11.87 0.00 29.61 3.41
90 91 5.707298 TGAGAGACCTTCTTTTGCTAAATGG 59.293 40.000 0.00 0.67 35.87 3.16
111 112 8.964772 AGGAATGATAAAGTTTTCAGGAATGAG 58.035 33.333 0.00 0.00 0.00 2.90
152 153 3.573967 AGTAATTTTCACTGCCTGTTGGG 59.426 43.478 0.00 0.00 38.36 4.12
156 157 4.022849 GCTGAAGTAATTTTCACTGCCTGT 60.023 41.667 0.00 0.00 33.71 4.00
159 160 4.503741 TGCTGAAGTAATTTTCACTGCC 57.496 40.909 0.00 0.00 33.71 4.85
162 163 7.922811 CCTTTCTTTGCTGAAGTAATTTTCACT 59.077 33.333 0.00 0.00 36.70 3.41
170 171 5.348164 GTTTGCCTTTCTTTGCTGAAGTAA 58.652 37.500 1.31 0.00 36.70 2.24
191 192 2.288525 AGGCTAGGAGGGATTTTGGTT 58.711 47.619 0.00 0.00 0.00 3.67
194 195 4.889995 CCTTTAAGGCTAGGAGGGATTTTG 59.110 45.833 0.00 0.00 33.13 2.44
212 213 6.404623 GCATGACATGTGTGAAATAGCCTTTA 60.405 38.462 16.62 0.00 0.00 1.85
242 243 7.227512 GGAATTATCTCCAAATACAGTGGTCTG 59.772 40.741 0.00 0.00 40.09 3.51
262 263 5.528600 TTCAGAGTGGGGATTTGGAATTA 57.471 39.130 0.00 0.00 0.00 1.40
275 276 4.216902 TCTTCACATGCAATTTCAGAGTGG 59.783 41.667 11.49 0.94 31.19 4.00
302 303 4.653341 ACTCTAAAGAGGACAGGGATCATG 59.347 45.833 11.53 0.00 46.13 3.07
306 307 3.772025 CACACTCTAAAGAGGACAGGGAT 59.228 47.826 11.53 0.00 46.13 3.85
318 319 4.150897 ACTTTGTCCTGCACACTCTAAA 57.849 40.909 0.00 0.00 33.41 1.85
331 332 2.143925 GCCTGAGTGTGTACTTTGTCC 58.856 52.381 0.00 0.00 37.25 4.02
334 335 2.254546 TGGCCTGAGTGTGTACTTTG 57.745 50.000 3.32 0.00 37.25 2.77
344 345 6.011122 AGAATATTTCAGATTGGCCTGAGT 57.989 37.500 3.32 0.00 43.28 3.41
347 348 6.293845 GCACTAGAATATTTCAGATTGGCCTG 60.294 42.308 3.32 0.00 35.55 4.85
353 354 7.292120 AGAGGAGGCACTAGAATATTTCAGATT 59.708 37.037 0.00 0.00 41.55 2.40
358 359 6.412362 TCAGAGGAGGCACTAGAATATTTC 57.588 41.667 0.00 0.00 41.55 2.17
361 362 4.283212 GCTTCAGAGGAGGCACTAGAATAT 59.717 45.833 0.00 0.00 44.87 1.28
391 392 9.778741 GATGATTATGGACAGAGTTAATACCAA 57.221 33.333 0.00 0.00 0.00 3.67
428 429 6.369005 TGTTGCACAATGAAAAACAAAGTTG 58.631 32.000 0.00 0.00 0.00 3.16
436 437 6.205464 TGGAAAAGTTGTTGCACAATGAAAAA 59.795 30.769 5.26 0.00 40.59 1.94
482 483 8.582657 TCTTATATACTCTCCTATTCAGCCAC 57.417 38.462 0.00 0.00 0.00 5.01
525 526 3.936453 GAGGCGGTGATAAAACATACACA 59.064 43.478 0.00 0.00 35.33 3.72
526 527 4.189231 AGAGGCGGTGATAAAACATACAC 58.811 43.478 0.00 0.00 0.00 2.90
597 598 7.187824 TCAGGAGTTGTAGCAGATTAAATCT 57.812 36.000 0.00 0.00 41.15 2.40
624 625 3.423539 TTGCCTATGTCTGATATGCCC 57.576 47.619 0.00 0.00 0.00 5.36
625 626 4.157289 CCATTTGCCTATGTCTGATATGCC 59.843 45.833 0.00 0.00 0.00 4.40
632 635 2.617308 CTGCTCCATTTGCCTATGTCTG 59.383 50.000 0.00 0.00 0.00 3.51
735 738 4.067896 ACTCTATCACACCTTTGCAACTG 58.932 43.478 0.00 0.00 0.00 3.16
752 755 4.538490 ACCAATGGAACCATGGTAACTCTA 59.462 41.667 20.12 10.85 36.67 2.43
775 778 8.040727 TCGTGATATTTCTCTTTTCTGGAATGA 58.959 33.333 0.00 0.00 0.00 2.57
790 793 8.366671 ACTATGGTTAGCTTTCGTGATATTTC 57.633 34.615 0.00 0.00 0.00 2.17
791 794 8.732746 AACTATGGTTAGCTTTCGTGATATTT 57.267 30.769 0.00 0.00 33.39 1.40
800 803 9.613957 GAAAAAGAAGAACTATGGTTAGCTTTC 57.386 33.333 12.98 7.68 35.58 2.62
801 804 8.577296 GGAAAAAGAAGAACTATGGTTAGCTTT 58.423 33.333 0.00 2.84 35.58 3.51
802 805 7.176865 GGGAAAAAGAAGAACTATGGTTAGCTT 59.823 37.037 0.00 0.00 35.58 3.74
803 806 6.659668 GGGAAAAAGAAGAACTATGGTTAGCT 59.340 38.462 0.00 0.00 35.58 3.32
804 807 6.127703 GGGGAAAAAGAAGAACTATGGTTAGC 60.128 42.308 0.00 0.00 35.58 3.09
805 808 7.121315 CAGGGGAAAAAGAAGAACTATGGTTAG 59.879 40.741 0.00 0.00 35.58 2.34
806 809 6.946009 CAGGGGAAAAAGAAGAACTATGGTTA 59.054 38.462 0.00 0.00 35.58 2.85
807 810 5.775195 CAGGGGAAAAAGAAGAACTATGGTT 59.225 40.000 0.00 0.00 38.52 3.67
808 811 5.325239 CAGGGGAAAAAGAAGAACTATGGT 58.675 41.667 0.00 0.00 0.00 3.55
809 812 4.706962 CCAGGGGAAAAAGAAGAACTATGG 59.293 45.833 0.00 0.00 0.00 2.74
810 813 4.706962 CCCAGGGGAAAAAGAAGAACTATG 59.293 45.833 0.00 0.00 37.50 2.23
811 814 4.935578 CCCAGGGGAAAAAGAAGAACTAT 58.064 43.478 0.00 0.00 37.50 2.12
812 815 4.382386 CCCAGGGGAAAAAGAAGAACTA 57.618 45.455 0.00 0.00 37.50 2.24
813 816 3.244887 CCCAGGGGAAAAAGAAGAACT 57.755 47.619 0.00 0.00 37.50 3.01
833 836 3.241520 AGGAAATCCTAGGCGCCC 58.758 61.111 26.15 4.35 46.48 6.13
844 847 1.886542 GTCGCCACAAGGAAAGGAAAT 59.113 47.619 0.00 0.00 36.89 2.17
870 873 1.599992 GACGAGGTGAACTTACGACG 58.400 55.000 0.00 0.00 0.00 5.12
871 874 1.402062 GGGACGAGGTGAACTTACGAC 60.402 57.143 0.00 0.00 0.00 4.34
904 907 4.748892 AGTCACAATCTGTAGGAATCACG 58.251 43.478 0.00 0.00 0.00 4.35
910 913 3.184382 TGGGAGTCACAATCTGTAGGA 57.816 47.619 0.00 0.00 0.00 2.94
916 919 4.849813 TGATTGATGGGAGTCACAATCT 57.150 40.909 20.77 1.15 44.73 2.40
920 923 4.573021 TTGATGATTGATGGGAGTCACA 57.427 40.909 0.00 0.00 0.00 3.58
925 928 2.626743 GGGCTTTGATGATTGATGGGAG 59.373 50.000 0.00 0.00 0.00 4.30
933 936 4.400567 GCAAGACTTAGGGCTTTGATGATT 59.599 41.667 0.00 0.00 0.00 2.57
937 940 2.359900 CGCAAGACTTAGGGCTTTGAT 58.640 47.619 0.00 0.00 43.02 2.57
966 970 1.528161 CGTAACGGAACAGTGGAAACC 59.472 52.381 0.00 0.00 0.00 3.27
971 975 0.719465 GATGCGTAACGGAACAGTGG 59.281 55.000 0.00 0.00 0.00 4.00
973 977 0.606604 AGGATGCGTAACGGAACAGT 59.393 50.000 0.00 0.00 0.00 3.55
981 985 0.108520 TGGGAACGAGGATGCGTAAC 60.109 55.000 0.00 0.00 44.86 2.50
988 992 1.123928 GTCTCCATGGGAACGAGGAT 58.876 55.000 13.02 0.00 35.64 3.24
992 996 3.014085 GCCGTCTCCATGGGAACGA 62.014 63.158 29.67 13.42 37.93 3.85
993 997 2.511600 GCCGTCTCCATGGGAACG 60.512 66.667 24.39 24.39 36.63 3.95
1033 1037 1.070445 GACCCTGAGATCCGCCATG 59.930 63.158 0.00 0.00 0.00 3.66
1035 1039 2.764128 GGACCCTGAGATCCGCCA 60.764 66.667 0.00 0.00 0.00 5.69
1052 1056 1.664017 CCGAGATCATCAGCGGCAG 60.664 63.158 1.45 0.00 37.08 4.85
1061 1065 2.434336 TCGAACAATTCCCCGAGATCAT 59.566 45.455 0.00 0.00 0.00 2.45
1069 1073 2.488153 CCAACTTCTCGAACAATTCCCC 59.512 50.000 0.00 0.00 0.00 4.81
1074 1078 3.557264 GGAGGTCCAACTTCTCGAACAAT 60.557 47.826 0.00 0.00 35.64 2.71
1075 1079 2.224209 GGAGGTCCAACTTCTCGAACAA 60.224 50.000 0.00 0.00 35.64 2.83
1077 1081 1.343465 TGGAGGTCCAACTTCTCGAAC 59.657 52.381 0.00 0.00 44.35 3.95
1099 1103 2.545532 CGACATCATCAAGCTCCTCCTC 60.546 54.545 0.00 0.00 0.00 3.71
1108 1112 6.758416 TCTTCCTCAATAACGACATCATCAAG 59.242 38.462 0.00 0.00 0.00 3.02
1123 1127 3.777522 AGATCGGGAACTTCTTCCTCAAT 59.222 43.478 0.00 0.00 45.11 2.57
1132 1136 2.159028 CCTCCAAGAGATCGGGAACTTC 60.159 54.545 0.00 0.00 0.00 3.01
1136 1140 2.247699 TTCCTCCAAGAGATCGGGAA 57.752 50.000 0.00 0.00 0.00 3.97
1139 1143 3.126831 CGAATTTCCTCCAAGAGATCGG 58.873 50.000 0.00 0.00 0.00 4.18
1191 1195 1.401539 GCGGCTTGGCTAAAGTTCTTG 60.402 52.381 0.00 0.00 38.25 3.02
1208 1212 1.937108 GCATATCTCGGAAGAAGGCGG 60.937 57.143 0.00 0.00 41.32 6.13
1220 1224 1.735920 CAGGCCGCTCGCATATCTC 60.736 63.158 0.00 0.00 40.31 2.75
1231 1235 1.070957 GGGTAGTATTCCAGGCCGC 59.929 63.158 0.00 0.00 0.00 6.53
1277 1281 3.868661 GGCTTGGACAACGAACAATTTTT 59.131 39.130 0.00 0.00 0.00 1.94
1281 1285 1.880027 GAGGCTTGGACAACGAACAAT 59.120 47.619 0.00 0.00 0.00 2.71
1287 1291 1.576421 GCAAGAGGCTTGGACAACG 59.424 57.895 9.01 0.00 40.25 4.10
1317 1321 2.689983 CCCCTGAAACATCATACAAGCC 59.310 50.000 0.00 0.00 0.00 4.35
1319 1323 3.624777 AGCCCCTGAAACATCATACAAG 58.375 45.455 0.00 0.00 0.00 3.16
1321 1325 4.446167 CCATAGCCCCTGAAACATCATACA 60.446 45.833 0.00 0.00 0.00 2.29
1330 1334 2.556559 GGAACAACCATAGCCCCTGAAA 60.557 50.000 0.00 0.00 38.79 2.69
1331 1335 1.005450 GGAACAACCATAGCCCCTGAA 59.995 52.381 0.00 0.00 38.79 3.02
1395 1399 5.419542 TGGATCTTTAACACTTCATCGGAG 58.580 41.667 0.00 0.00 0.00 4.63
1413 1417 3.996921 AGCCAGATGGTCATATGGATC 57.003 47.619 23.90 10.36 44.52 3.36
1423 1427 2.308570 TGTGGATTTGTAGCCAGATGGT 59.691 45.455 0.00 0.00 41.34 3.55
1448 1452 4.273480 CCTTTCTACAATAACCATCAGGCG 59.727 45.833 0.00 0.00 39.06 5.52
1472 1476 5.441718 TTTCAGAAGCTTCTCCACCATAT 57.558 39.130 26.18 0.00 34.74 1.78
1492 1496 0.818040 AGCACTTCTCCGGCGTTTTT 60.818 50.000 6.01 0.00 0.00 1.94
1500 1504 2.231478 TCTAACTTCCAGCACTTCTCCG 59.769 50.000 0.00 0.00 0.00 4.63
1516 1520 2.007608 GGAGTTGCCGGTGATTCTAAC 58.992 52.381 1.90 0.00 0.00 2.34
1518 1522 1.207089 CTGGAGTTGCCGGTGATTCTA 59.793 52.381 1.90 0.00 40.66 2.10
1520 1524 1.026718 CCTGGAGTTGCCGGTGATTC 61.027 60.000 1.90 0.00 41.87 2.52
1529 1533 5.429957 GATGTAATCATTCCTGGAGTTGC 57.570 43.478 0.00 0.00 44.70 4.17
1558 1562 2.038820 TCCTCACATCATGCTTGACACA 59.961 45.455 4.14 0.00 33.85 3.72
1566 1570 5.412594 TGTAAGAAGTTTCCTCACATCATGC 59.587 40.000 0.00 0.00 0.00 4.06
1587 1591 9.522804 GATTTCACCACACTTACAAATTTTGTA 57.477 29.630 16.17 16.17 43.27 2.41
1596 1600 7.383029 CGTACTTTAGATTTCACCACACTTACA 59.617 37.037 0.00 0.00 0.00 2.41
1612 1616 4.401519 AGCATAGACCTTGCGTACTTTAGA 59.598 41.667 0.00 0.00 44.82 2.10
1619 1623 3.362581 GCAGCATAGACCTTGCGTA 57.637 52.632 0.00 0.00 44.82 4.42
1634 1638 5.484173 TGCTAATTTTTCATACCTCGCAG 57.516 39.130 0.00 0.00 0.00 5.18
1637 1641 6.436843 ACCTTGCTAATTTTTCATACCTCG 57.563 37.500 0.00 0.00 0.00 4.63
1664 1668 1.806542 CTATGACACCACACACCTTGC 59.193 52.381 0.00 0.00 0.00 4.01
1678 1682 2.604914 CGTTGTGCTCATGTCCTATGAC 59.395 50.000 0.00 0.00 42.12 3.06
1698 1702 1.762708 AAACCCCATTGCCATACTCG 58.237 50.000 0.00 0.00 0.00 4.18
1703 1707 3.648716 GCAAAAACCCCATTGCCAT 57.351 47.368 0.00 0.00 44.72 4.40
1721 1725 8.624776 AGTCACCAAACTTTAAATCTTTCTCTG 58.375 33.333 0.00 0.00 0.00 3.35
1757 1761 1.153628 GCGCGTACTGGAGGTTCAT 60.154 57.895 8.43 0.00 0.00 2.57
1780 1784 1.315257 CGGCTTGGTTCCCAATCAGG 61.315 60.000 0.00 0.00 43.07 3.86
1821 1825 1.549950 GGTTTTGCCCCCTTCAGATCA 60.550 52.381 0.00 0.00 0.00 2.92
1835 1839 7.510549 TCATCTTTCTTACTCAAGGGTTTTG 57.489 36.000 0.00 0.00 32.22 2.44
1836 1840 7.394641 GGATCATCTTTCTTACTCAAGGGTTTT 59.605 37.037 0.00 0.00 32.22 2.43
1837 1841 6.887002 GGATCATCTTTCTTACTCAAGGGTTT 59.113 38.462 0.00 0.00 32.22 3.27
1838 1842 6.418946 GGATCATCTTTCTTACTCAAGGGTT 58.581 40.000 0.00 0.00 32.22 4.11
1852 1856 5.301835 CCATCTACAGTGGGATCATCTTT 57.698 43.478 0.00 0.00 32.98 2.52
1877 1881 4.437930 GGCTTGTTGCAGTATGATTCAGAC 60.438 45.833 3.19 3.19 45.15 3.51
1879 1883 3.693085 AGGCTTGTTGCAGTATGATTCAG 59.307 43.478 0.00 0.00 45.15 3.02
1885 1889 4.764679 TTACAAGGCTTGTTGCAGTATG 57.235 40.909 35.13 6.06 42.22 2.39
1891 1895 4.202070 TGGTAACTTTACAAGGCTTGTTGC 60.202 41.667 35.13 20.65 40.77 4.17
1901 1905 8.588290 ATCAGCCATATTTGGTAACTTTACAA 57.412 30.769 4.00 0.00 45.57 2.41
1907 1911 7.090319 TCCATATCAGCCATATTTGGTAACT 57.910 36.000 4.00 0.00 45.57 2.24
1938 1942 8.110271 AGATTTAGATGTCTACGGGATGATCTA 58.890 37.037 0.00 0.00 32.12 1.98
1959 1963 7.809238 TGACCTCTGAAATATCATCCAGATTT 58.191 34.615 0.00 0.00 38.19 2.17
1963 1967 7.337689 TGTTTTGACCTCTGAAATATCATCCAG 59.662 37.037 0.00 0.00 34.37 3.86
1979 1983 0.183492 TGCTGCTCCTGTTTTGACCT 59.817 50.000 0.00 0.00 0.00 3.85
1980 1984 1.032014 TTGCTGCTCCTGTTTTGACC 58.968 50.000 0.00 0.00 0.00 4.02
2013 2018 5.811100 GTCAGTTAACAGCAGTAGATTACCC 59.189 44.000 8.61 0.00 0.00 3.69
2015 2020 7.513190 CTGTCAGTTAACAGCAGTAGATTAC 57.487 40.000 8.61 0.00 40.18 1.89
2037 2042 4.035558 TCAGCTATTTTATCCGCTTTGCTG 59.964 41.667 0.00 0.00 44.39 4.41
2038 2043 4.199310 TCAGCTATTTTATCCGCTTTGCT 58.801 39.130 0.00 0.00 0.00 3.91
2042 2047 5.106396 GCATCATCAGCTATTTTATCCGCTT 60.106 40.000 0.00 0.00 0.00 4.68
2045 2050 6.370994 AGAAGCATCATCAGCTATTTTATCCG 59.629 38.462 0.00 0.00 42.53 4.18
2053 2058 2.632028 ACGGAGAAGCATCATCAGCTAT 59.368 45.455 0.00 0.00 42.53 2.97
2073 2078 2.391389 GCTGCCCGTGCTAGAACAC 61.391 63.158 0.74 0.00 38.71 3.32
2105 2110 3.900601 AGAACCTGAATCCTCGCTATCAT 59.099 43.478 0.00 0.00 0.00 2.45
2110 2115 2.741145 AGTAGAACCTGAATCCTCGCT 58.259 47.619 0.00 0.00 0.00 4.93
2113 2118 9.974980 CTAAAGATTAGTAGAACCTGAATCCTC 57.025 37.037 0.00 0.00 0.00 3.71
2123 2128 4.056740 GCCCGCCTAAAGATTAGTAGAAC 58.943 47.826 0.00 0.00 0.00 3.01
2130 2135 1.502690 TGGAGCCCGCCTAAAGATTA 58.497 50.000 0.00 0.00 0.00 1.75
2136 2141 2.366301 TCCATGGAGCCCGCCTAA 60.366 61.111 11.44 0.00 0.00 2.69
2137 2142 2.844362 CTCCATGGAGCCCGCCTA 60.844 66.667 28.45 0.00 35.31 3.93
2211 2218 2.880890 CCCAACTTCTTGAACTGTCCAG 59.119 50.000 0.00 0.00 0.00 3.86
2212 2219 2.422803 CCCCAACTTCTTGAACTGTCCA 60.423 50.000 0.00 0.00 0.00 4.02
2215 2222 1.215423 AGCCCCAACTTCTTGAACTGT 59.785 47.619 0.00 0.00 0.00 3.55
2222 2229 0.185901 TGCAAGAGCCCCAACTTCTT 59.814 50.000 0.00 0.00 41.13 2.52
2226 2233 1.043022 CTTTTGCAAGAGCCCCAACT 58.957 50.000 3.78 0.00 41.13 3.16
2254 2261 2.035961 CAGACAGGAAGACGAACCTCAA 59.964 50.000 0.00 0.00 33.91 3.02
2255 2262 1.613925 CAGACAGGAAGACGAACCTCA 59.386 52.381 0.00 0.00 33.91 3.86
2269 2276 1.391485 CGATTGCCTCGTTTCAGACAG 59.609 52.381 0.00 0.00 42.56 3.51
2288 2295 3.829886 TCATTTTAGCTTTGGCAGACG 57.170 42.857 0.00 0.00 41.70 4.18
2302 2309 6.612863 AGGCCTAGCTTCCATTTTATCATTTT 59.387 34.615 1.29 0.00 0.00 1.82
2306 2313 4.796110 AGGCCTAGCTTCCATTTTATCA 57.204 40.909 1.29 0.00 0.00 2.15
2322 2329 4.477213 ACACCACATTAACCTATTAGGCCT 59.523 41.667 11.78 11.78 39.63 5.19
2330 2337 6.299922 TCACAATCAACACCACATTAACCTA 58.700 36.000 0.00 0.00 0.00 3.08
2336 2343 3.243839 GCCTTCACAATCAACACCACATT 60.244 43.478 0.00 0.00 0.00 2.71
2337 2344 2.297033 GCCTTCACAATCAACACCACAT 59.703 45.455 0.00 0.00 0.00 3.21
2339 2346 1.000274 GGCCTTCACAATCAACACCAC 60.000 52.381 0.00 0.00 0.00 4.16
2366 2373 0.450184 CCAAAACGTAGCCAATCCCG 59.550 55.000 0.00 0.00 0.00 5.14
2407 2415 9.935241 AATATATCTCTTGCACGAATCAAGTAT 57.065 29.630 12.83 10.88 41.13 2.12
2416 2424 7.704047 GCTCATATCAATATATCTCTTGCACGA 59.296 37.037 0.00 0.00 0.00 4.35
2437 2445 4.275196 CGGATCTTGATCAACAATGCTCAT 59.725 41.667 3.38 0.00 37.88 2.90
2442 2450 5.124457 ACTTTCCGGATCTTGATCAACAATG 59.876 40.000 4.15 0.00 37.88 2.82
2483 2492 1.977854 ACACAAGGCTCACCATAGACA 59.022 47.619 0.00 0.00 39.06 3.41
2484 2493 2.350522 CACACAAGGCTCACCATAGAC 58.649 52.381 0.00 0.00 39.06 2.59
2492 2501 3.239464 TGCTCCACACAAGGCTCA 58.761 55.556 0.00 0.00 0.00 4.26
2511 2520 0.036022 TGATCCCACATGCGTTGACA 59.964 50.000 0.00 0.00 0.00 3.58
2536 2545 5.859495 AGTTTGAAACTCCCTTCAGTCTAG 58.141 41.667 4.45 0.00 37.02 2.43
2541 2550 3.243535 GGCAAGTTTGAAACTCCCTTCAG 60.244 47.826 11.44 0.00 41.91 3.02
2597 2606 1.198637 GAGAAGTGTTCATGCTGCCAC 59.801 52.381 0.00 0.00 0.00 5.01
2617 2626 5.465390 TGACTTTCACTATGGTTCGTTCTTG 59.535 40.000 0.00 0.00 0.00 3.02
2618 2627 5.607477 TGACTTTCACTATGGTTCGTTCTT 58.393 37.500 0.00 0.00 0.00 2.52
2623 2632 5.171476 ACATCTGACTTTCACTATGGTTCG 58.829 41.667 0.00 0.00 0.00 3.95
2626 2635 6.213600 ACCTTACATCTGACTTTCACTATGGT 59.786 38.462 0.00 0.00 0.00 3.55
2632 2641 8.603242 TCTAAAACCTTACATCTGACTTTCAC 57.397 34.615 0.00 0.00 0.00 3.18
2646 2655 8.079211 ACTATGAGTGCATCTCTAAAACCTTA 57.921 34.615 14.60 0.00 43.13 2.69
2650 2659 7.959651 CACAAACTATGAGTGCATCTCTAAAAC 59.040 37.037 14.60 0.00 43.13 2.43
2659 2668 3.947868 AGCTCACAAACTATGAGTGCAT 58.052 40.909 0.00 0.00 44.60 3.96
2690 2699 3.053896 GGTGCCCCGAAGAAACCG 61.054 66.667 0.00 0.00 0.00 4.44
2701 2710 0.893727 ATCAAAGGTGAACGGTGCCC 60.894 55.000 0.00 0.00 37.30 5.36
2705 2714 2.752903 GCCATTATCAAAGGTGAACGGT 59.247 45.455 0.00 0.00 37.30 4.83
2706 2715 2.099098 GGCCATTATCAAAGGTGAACGG 59.901 50.000 0.00 0.00 37.30 4.44
2710 2719 3.355378 CACTGGCCATTATCAAAGGTGA 58.645 45.455 5.51 0.00 38.41 4.02
2736 2745 2.665052 GTCGGACATGAACGTTACCTTC 59.335 50.000 0.00 0.00 0.00 3.46
2744 2753 1.531264 CGGTCTAGTCGGACATGAACG 60.531 57.143 20.15 20.15 37.91 3.95
2749 2758 0.393944 TGCTCGGTCTAGTCGGACAT 60.394 55.000 11.27 0.00 37.91 3.06
2753 2762 0.248661 CACATGCTCGGTCTAGTCGG 60.249 60.000 0.00 0.00 0.00 4.79
2771 2780 5.665916 TGTCTCTTCAGTCATCATTAGCA 57.334 39.130 0.00 0.00 0.00 3.49
2833 2842 2.997897 GAGGGCAGTGGTCCGAGT 60.998 66.667 0.00 0.00 46.12 4.18
2839 2848 0.109342 CAACAGAAGAGGGCAGTGGT 59.891 55.000 0.00 0.00 0.00 4.16
2849 2858 1.699083 TCCTCCACATGCAACAGAAGA 59.301 47.619 0.00 0.00 0.00 2.87
2867 2876 6.755607 CCTTACTACGTTTATCCTCAACTTCC 59.244 42.308 0.00 0.00 0.00 3.46
2872 2881 6.438425 ACTTCCCTTACTACGTTTATCCTCAA 59.562 38.462 0.00 0.00 0.00 3.02
2885 2894 7.801893 TTCATACTTTGGACTTCCCTTACTA 57.198 36.000 0.00 0.00 35.38 1.82
2886 2895 6.697641 TTCATACTTTGGACTTCCCTTACT 57.302 37.500 0.00 0.00 35.38 2.24
2913 2922 3.118261 AGTTTATGATCACGCTCCCACAT 60.118 43.478 0.00 0.00 0.00 3.21
2926 2935 6.986817 CGAAATCACCTCCTGTAGTTTATGAT 59.013 38.462 0.00 0.00 0.00 2.45
2927 2936 6.153851 TCGAAATCACCTCCTGTAGTTTATGA 59.846 38.462 0.00 0.00 0.00 2.15
2928 2937 6.338146 TCGAAATCACCTCCTGTAGTTTATG 58.662 40.000 0.00 0.00 0.00 1.90
2929 2938 6.407074 CCTCGAAATCACCTCCTGTAGTTTAT 60.407 42.308 0.00 0.00 0.00 1.40
2930 2939 5.105473 CCTCGAAATCACCTCCTGTAGTTTA 60.105 44.000 0.00 0.00 0.00 2.01
2931 2940 4.322801 CCTCGAAATCACCTCCTGTAGTTT 60.323 45.833 0.00 0.00 0.00 2.66
2932 2941 3.195825 CCTCGAAATCACCTCCTGTAGTT 59.804 47.826 0.00 0.00 0.00 2.24
2933 2942 2.761208 CCTCGAAATCACCTCCTGTAGT 59.239 50.000 0.00 0.00 0.00 2.73
2934 2943 2.101582 CCCTCGAAATCACCTCCTGTAG 59.898 54.545 0.00 0.00 0.00 2.74
2935 2944 2.108168 CCCTCGAAATCACCTCCTGTA 58.892 52.381 0.00 0.00 0.00 2.74
2936 2945 0.905357 CCCTCGAAATCACCTCCTGT 59.095 55.000 0.00 0.00 0.00 4.00
2937 2946 0.462759 GCCCTCGAAATCACCTCCTG 60.463 60.000 0.00 0.00 0.00 3.86
2938 2947 1.908483 GCCCTCGAAATCACCTCCT 59.092 57.895 0.00 0.00 0.00 3.69
2939 2948 1.521681 CGCCCTCGAAATCACCTCC 60.522 63.158 0.00 0.00 38.10 4.30
2940 2949 1.084370 CACGCCCTCGAAATCACCTC 61.084 60.000 0.00 0.00 39.41 3.85
2941 2950 1.079127 CACGCCCTCGAAATCACCT 60.079 57.895 0.00 0.00 39.41 4.00
2942 2951 1.079405 TCACGCCCTCGAAATCACC 60.079 57.895 0.00 0.00 39.41 4.02
2943 2952 0.108804 TCTCACGCCCTCGAAATCAC 60.109 55.000 0.00 0.00 39.41 3.06
2944 2953 0.824109 ATCTCACGCCCTCGAAATCA 59.176 50.000 0.00 0.00 39.41 2.57
2945 2954 1.492720 GATCTCACGCCCTCGAAATC 58.507 55.000 0.00 0.00 39.41 2.17
2946 2955 0.249073 CGATCTCACGCCCTCGAAAT 60.249 55.000 0.00 0.00 39.41 2.17
2947 2956 1.138883 CGATCTCACGCCCTCGAAA 59.861 57.895 0.00 0.00 39.41 3.46
2948 2957 2.798689 CGATCTCACGCCCTCGAA 59.201 61.111 0.00 0.00 39.41 3.71
2957 2966 0.109458 TGGTACGTGTGCGATCTCAC 60.109 55.000 8.93 8.93 42.00 3.51
2958 2967 0.170339 CTGGTACGTGTGCGATCTCA 59.830 55.000 0.00 0.00 42.00 3.27
2959 2968 0.525668 CCTGGTACGTGTGCGATCTC 60.526 60.000 0.00 0.00 42.00 2.75
2960 2969 1.511305 CCTGGTACGTGTGCGATCT 59.489 57.895 0.00 0.00 42.00 2.75
2961 2970 1.518572 CCCTGGTACGTGTGCGATC 60.519 63.158 0.00 0.00 42.00 3.69
2962 2971 2.577059 CCCTGGTACGTGTGCGAT 59.423 61.111 0.00 0.00 42.00 4.58
2963 2972 3.687102 CCCCTGGTACGTGTGCGA 61.687 66.667 0.00 0.00 42.00 5.10
2966 2975 3.687102 TCGCCCCTGGTACGTGTG 61.687 66.667 0.00 0.00 0.00 3.82
2967 2976 3.688159 GTCGCCCCTGGTACGTGT 61.688 66.667 0.00 0.00 0.00 4.49
2968 2977 4.446413 GGTCGCCCCTGGTACGTG 62.446 72.222 0.00 0.00 0.00 4.49
2969 2978 2.578586 ATAGGTCGCCCCTGGTACGT 62.579 60.000 0.00 0.00 45.81 3.57
2970 2979 1.803366 GATAGGTCGCCCCTGGTACG 61.803 65.000 3.93 0.00 45.81 3.67
2971 2980 1.470165 GGATAGGTCGCCCCTGGTAC 61.470 65.000 3.93 0.00 45.81 3.34
2972 2981 1.152398 GGATAGGTCGCCCCTGGTA 60.152 63.158 3.93 0.00 45.81 3.25
2973 2982 2.446036 GGATAGGTCGCCCCTGGT 60.446 66.667 3.93 0.00 45.81 4.00
2974 2983 2.445845 TGGATAGGTCGCCCCTGG 60.446 66.667 3.93 0.00 45.81 4.45
2975 2984 2.822399 GTGGATAGGTCGCCCCTG 59.178 66.667 3.93 0.00 45.81 4.45
2977 2986 3.925090 CCGTGGATAGGTCGCCCC 61.925 72.222 0.00 0.00 0.00 5.80
2978 2987 3.152400 ACCGTGGATAGGTCGCCC 61.152 66.667 0.00 0.00 37.44 6.13
2979 2988 2.106332 CACCGTGGATAGGTCGCC 59.894 66.667 0.00 0.00 40.59 5.54
2980 2989 2.106332 CCACCGTGGATAGGTCGC 59.894 66.667 12.68 0.00 40.96 5.19
2981 2990 2.106332 GCCACCGTGGATAGGTCG 59.894 66.667 22.37 0.00 40.96 4.79
2982 2991 0.743345 GTTGCCACCGTGGATAGGTC 60.743 60.000 22.37 2.68 40.96 3.85
2983 2992 1.298667 GTTGCCACCGTGGATAGGT 59.701 57.895 22.37 0.00 40.96 3.08
2984 2993 1.451387 GGTTGCCACCGTGGATAGG 60.451 63.158 22.37 0.00 40.96 2.57
2985 2994 4.218722 GGTTGCCACCGTGGATAG 57.781 61.111 22.37 0.00 40.96 2.08
2993 3002 0.951040 CACGAAGAGAGGTTGCCACC 60.951 60.000 0.00 0.00 44.67 4.61
2994 3003 1.569479 GCACGAAGAGAGGTTGCCAC 61.569 60.000 0.00 0.00 0.00 5.01
2995 3004 1.301716 GCACGAAGAGAGGTTGCCA 60.302 57.895 0.00 0.00 0.00 4.92
2996 3005 1.004440 AGCACGAAGAGAGGTTGCC 60.004 57.895 0.00 0.00 0.00 4.52
2997 3006 0.601311 ACAGCACGAAGAGAGGTTGC 60.601 55.000 0.00 0.00 0.00 4.17
2998 3007 1.269778 TGACAGCACGAAGAGAGGTTG 60.270 52.381 0.00 0.00 0.00 3.77
2999 3008 1.040646 TGACAGCACGAAGAGAGGTT 58.959 50.000 0.00 0.00 0.00 3.50
3000 3009 1.067283 CATGACAGCACGAAGAGAGGT 60.067 52.381 0.00 0.00 0.00 3.85
3001 3010 1.638133 CATGACAGCACGAAGAGAGG 58.362 55.000 0.00 0.00 0.00 3.69
3002 3011 0.997932 GCATGACAGCACGAAGAGAG 59.002 55.000 0.00 0.00 0.00 3.20
3003 3012 0.318120 TGCATGACAGCACGAAGAGA 59.682 50.000 0.00 0.00 40.11 3.10
3004 3013 1.128136 CTTGCATGACAGCACGAAGAG 59.872 52.381 0.00 0.00 45.61 2.85
3005 3014 1.150827 CTTGCATGACAGCACGAAGA 58.849 50.000 0.00 0.00 45.61 2.87
3006 3015 1.150827 TCTTGCATGACAGCACGAAG 58.849 50.000 0.00 0.00 45.61 3.79
3007 3016 1.592064 TTCTTGCATGACAGCACGAA 58.408 45.000 1.02 11.84 46.33 3.85
3008 3017 1.812235 ATTCTTGCATGACAGCACGA 58.188 45.000 1.02 0.00 45.61 4.35
3009 3018 2.624316 AATTCTTGCATGACAGCACG 57.376 45.000 1.02 0.00 45.61 5.34
3010 3019 5.702865 TCTTTAATTCTTGCATGACAGCAC 58.297 37.500 1.02 0.00 45.61 4.40
3011 3020 5.963176 TCTTTAATTCTTGCATGACAGCA 57.037 34.783 1.02 0.00 43.99 4.41
3012 3021 7.201496 CCATTTCTTTAATTCTTGCATGACAGC 60.201 37.037 1.02 0.00 0.00 4.40
3013 3022 8.030692 TCCATTTCTTTAATTCTTGCATGACAG 58.969 33.333 1.02 0.00 0.00 3.51
3014 3023 7.894708 TCCATTTCTTTAATTCTTGCATGACA 58.105 30.769 1.02 0.00 0.00 3.58
3015 3024 7.009907 GCTCCATTTCTTTAATTCTTGCATGAC 59.990 37.037 1.02 0.00 0.00 3.06
3016 3025 7.037438 GCTCCATTTCTTTAATTCTTGCATGA 58.963 34.615 0.00 0.00 0.00 3.07
3017 3026 6.814644 TGCTCCATTTCTTTAATTCTTGCATG 59.185 34.615 0.00 0.00 0.00 4.06
3018 3027 6.938507 TGCTCCATTTCTTTAATTCTTGCAT 58.061 32.000 0.00 0.00 0.00 3.96
3019 3028 6.343716 TGCTCCATTTCTTTAATTCTTGCA 57.656 33.333 0.00 0.00 0.00 4.08
3020 3029 6.312180 CCTTGCTCCATTTCTTTAATTCTTGC 59.688 38.462 0.00 0.00 0.00 4.01
3021 3030 7.605449 TCCTTGCTCCATTTCTTTAATTCTTG 58.395 34.615 0.00 0.00 0.00 3.02
3022 3031 7.671398 TCTCCTTGCTCCATTTCTTTAATTCTT 59.329 33.333 0.00 0.00 0.00 2.52
3023 3032 7.177878 TCTCCTTGCTCCATTTCTTTAATTCT 58.822 34.615 0.00 0.00 0.00 2.40
3024 3033 7.396540 TCTCCTTGCTCCATTTCTTTAATTC 57.603 36.000 0.00 0.00 0.00 2.17
3025 3034 7.452813 AGTTCTCCTTGCTCCATTTCTTTAATT 59.547 33.333 0.00 0.00 0.00 1.40
3026 3035 6.950619 AGTTCTCCTTGCTCCATTTCTTTAAT 59.049 34.615 0.00 0.00 0.00 1.40
3027 3036 6.306987 AGTTCTCCTTGCTCCATTTCTTTAA 58.693 36.000 0.00 0.00 0.00 1.52
3028 3037 5.880901 AGTTCTCCTTGCTCCATTTCTTTA 58.119 37.500 0.00 0.00 0.00 1.85
3029 3038 4.734266 AGTTCTCCTTGCTCCATTTCTTT 58.266 39.130 0.00 0.00 0.00 2.52
3030 3039 4.379302 AGTTCTCCTTGCTCCATTTCTT 57.621 40.909 0.00 0.00 0.00 2.52
3031 3040 4.379302 AAGTTCTCCTTGCTCCATTTCT 57.621 40.909 0.00 0.00 30.18 2.52
3032 3041 4.321527 CCAAAGTTCTCCTTGCTCCATTTC 60.322 45.833 0.00 0.00 32.32 2.17
3033 3042 3.575687 CCAAAGTTCTCCTTGCTCCATTT 59.424 43.478 0.00 0.00 32.32 2.32
3034 3043 3.160269 CCAAAGTTCTCCTTGCTCCATT 58.840 45.455 0.00 0.00 32.32 3.16
3035 3044 2.376518 TCCAAAGTTCTCCTTGCTCCAT 59.623 45.455 0.00 0.00 32.32 3.41
3036 3045 1.774254 TCCAAAGTTCTCCTTGCTCCA 59.226 47.619 0.00 0.00 32.32 3.86
3037 3046 2.155279 GTCCAAAGTTCTCCTTGCTCC 58.845 52.381 0.00 0.00 32.32 4.70
3038 3047 2.851195 TGTCCAAAGTTCTCCTTGCTC 58.149 47.619 0.00 0.00 32.32 4.26
3039 3048 3.152341 CATGTCCAAAGTTCTCCTTGCT 58.848 45.455 0.00 0.00 32.32 3.91
3040 3049 2.887152 ACATGTCCAAAGTTCTCCTTGC 59.113 45.455 0.00 0.00 32.32 4.01
3041 3050 5.063204 TGTACATGTCCAAAGTTCTCCTTG 58.937 41.667 0.00 0.00 32.32 3.61
3042 3051 5.304686 TGTACATGTCCAAAGTTCTCCTT 57.695 39.130 0.00 0.00 33.79 3.36
3043 3052 4.974645 TGTACATGTCCAAAGTTCTCCT 57.025 40.909 0.00 0.00 0.00 3.69
3044 3053 4.819630 TGTTGTACATGTCCAAAGTTCTCC 59.180 41.667 5.32 0.00 0.00 3.71
3045 3054 6.183360 TGTTGTTGTACATGTCCAAAGTTCTC 60.183 38.462 5.32 0.00 0.00 2.87
3046 3055 5.650266 TGTTGTTGTACATGTCCAAAGTTCT 59.350 36.000 5.32 0.00 0.00 3.01
3047 3056 5.885881 TGTTGTTGTACATGTCCAAAGTTC 58.114 37.500 5.32 0.00 0.00 3.01
3048 3057 5.906113 TGTTGTTGTACATGTCCAAAGTT 57.094 34.783 5.32 0.00 0.00 2.66
3049 3058 5.906113 TTGTTGTTGTACATGTCCAAAGT 57.094 34.783 5.32 0.00 0.00 2.66
3050 3059 8.864069 TTATTTGTTGTTGTACATGTCCAAAG 57.136 30.769 5.32 0.00 0.00 2.77
3051 3060 9.823647 ATTTATTTGTTGTTGTACATGTCCAAA 57.176 25.926 5.32 5.19 0.00 3.28
3067 3076 8.462016 GCTCCTGTCTCAACATATTTATTTGTT 58.538 33.333 0.00 0.00 36.53 2.83
3068 3077 7.831193 AGCTCCTGTCTCAACATATTTATTTGT 59.169 33.333 0.00 0.00 34.13 2.83
3069 3078 8.218338 AGCTCCTGTCTCAACATATTTATTTG 57.782 34.615 0.00 0.00 34.13 2.32
3070 3079 9.553064 CTAGCTCCTGTCTCAACATATTTATTT 57.447 33.333 0.00 0.00 34.13 1.40
3071 3080 8.928448 TCTAGCTCCTGTCTCAACATATTTATT 58.072 33.333 0.00 0.00 34.13 1.40
3072 3081 8.484214 TCTAGCTCCTGTCTCAACATATTTAT 57.516 34.615 0.00 0.00 34.13 1.40
3073 3082 7.561722 ACTCTAGCTCCTGTCTCAACATATTTA 59.438 37.037 0.00 0.00 34.13 1.40
3074 3083 6.382570 ACTCTAGCTCCTGTCTCAACATATTT 59.617 38.462 0.00 0.00 34.13 1.40
3075 3084 5.896678 ACTCTAGCTCCTGTCTCAACATATT 59.103 40.000 0.00 0.00 34.13 1.28
3076 3085 5.454062 ACTCTAGCTCCTGTCTCAACATAT 58.546 41.667 0.00 0.00 34.13 1.78
3077 3086 4.861196 ACTCTAGCTCCTGTCTCAACATA 58.139 43.478 0.00 0.00 34.13 2.29
3078 3087 3.699038 GACTCTAGCTCCTGTCTCAACAT 59.301 47.826 0.00 0.00 34.13 2.71
3079 3088 3.085533 GACTCTAGCTCCTGTCTCAACA 58.914 50.000 0.00 0.00 0.00 3.33
3080 3089 2.096819 CGACTCTAGCTCCTGTCTCAAC 59.903 54.545 0.00 0.00 0.00 3.18
3081 3090 2.360844 CGACTCTAGCTCCTGTCTCAA 58.639 52.381 0.00 0.00 0.00 3.02
3082 3091 2.014574 GCGACTCTAGCTCCTGTCTCA 61.015 57.143 0.00 0.00 0.00 3.27
3083 3092 0.661020 GCGACTCTAGCTCCTGTCTC 59.339 60.000 0.00 0.00 0.00 3.36
3084 3093 0.254747 AGCGACTCTAGCTCCTGTCT 59.745 55.000 0.00 0.00 41.83 3.41
3085 3094 0.380378 CAGCGACTCTAGCTCCTGTC 59.620 60.000 0.00 0.00 44.06 3.51
3086 3095 1.662438 GCAGCGACTCTAGCTCCTGT 61.662 60.000 0.00 0.00 44.06 4.00
3087 3096 1.065600 GCAGCGACTCTAGCTCCTG 59.934 63.158 0.00 0.00 44.06 3.86
3088 3097 0.967887 TTGCAGCGACTCTAGCTCCT 60.968 55.000 0.00 0.00 44.06 3.69
3089 3098 0.804156 GTTGCAGCGACTCTAGCTCC 60.804 60.000 5.41 0.00 44.06 4.70
3090 3099 0.172352 AGTTGCAGCGACTCTAGCTC 59.828 55.000 9.80 0.00 44.06 4.09
3092 3101 1.391826 GAAAGTTGCAGCGACTCTAGC 59.608 52.381 16.16 2.51 0.00 3.42
3093 3102 2.953020 AGAAAGTTGCAGCGACTCTAG 58.047 47.619 16.16 0.00 0.00 2.43
3094 3103 3.059884 CAAGAAAGTTGCAGCGACTCTA 58.940 45.455 16.16 0.00 0.00 2.43
3095 3104 1.869767 CAAGAAAGTTGCAGCGACTCT 59.130 47.619 16.16 1.12 0.00 3.24
3096 3105 1.599542 ACAAGAAAGTTGCAGCGACTC 59.400 47.619 16.16 4.87 0.00 3.36
3097 3106 1.668419 ACAAGAAAGTTGCAGCGACT 58.332 45.000 9.80 9.80 0.00 4.18
3098 3107 2.544267 ACTACAAGAAAGTTGCAGCGAC 59.456 45.455 4.35 4.35 0.00 5.19
3099 3108 2.543848 CACTACAAGAAAGTTGCAGCGA 59.456 45.455 0.00 0.00 0.00 4.93
3100 3109 2.543848 TCACTACAAGAAAGTTGCAGCG 59.456 45.455 0.00 0.00 0.00 5.18
3101 3110 3.304057 GGTCACTACAAGAAAGTTGCAGC 60.304 47.826 0.00 0.00 0.00 5.25
3102 3111 3.059597 CGGTCACTACAAGAAAGTTGCAG 60.060 47.826 0.00 0.00 0.00 4.41
3103 3112 2.869801 CGGTCACTACAAGAAAGTTGCA 59.130 45.455 0.00 0.00 0.00 4.08
3104 3113 2.870411 ACGGTCACTACAAGAAAGTTGC 59.130 45.455 0.00 0.00 0.00 4.17
3105 3114 4.209288 CAGACGGTCACTACAAGAAAGTTG 59.791 45.833 11.27 0.00 0.00 3.16
3106 3115 4.142004 ACAGACGGTCACTACAAGAAAGTT 60.142 41.667 11.27 0.00 0.00 2.66
3107 3116 3.383825 ACAGACGGTCACTACAAGAAAGT 59.616 43.478 11.27 0.00 0.00 2.66
3108 3117 3.978687 ACAGACGGTCACTACAAGAAAG 58.021 45.455 11.27 0.00 0.00 2.62
3109 3118 4.116961 CAACAGACGGTCACTACAAGAAA 58.883 43.478 11.27 0.00 0.00 2.52
3110 3119 3.382227 TCAACAGACGGTCACTACAAGAA 59.618 43.478 11.27 0.00 0.00 2.52
3111 3120 2.953648 TCAACAGACGGTCACTACAAGA 59.046 45.455 11.27 0.00 0.00 3.02
3112 3121 3.364889 TCAACAGACGGTCACTACAAG 57.635 47.619 11.27 0.00 0.00 3.16
3113 3122 3.319689 TGATCAACAGACGGTCACTACAA 59.680 43.478 11.27 0.00 0.00 2.41
3114 3123 2.888414 TGATCAACAGACGGTCACTACA 59.112 45.455 11.27 0.00 0.00 2.74
3115 3124 3.570926 TGATCAACAGACGGTCACTAC 57.429 47.619 11.27 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.