Multiple sequence alignment - TraesCS2A01G213000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G213000 chr2A 100.000 4772 0 0 1 4772 197662390 197667161 0.000000e+00 8813.0
1 TraesCS2A01G213000 chr2A 100.000 2427 0 0 5089 7515 197667478 197669904 0.000000e+00 4482.0
2 TraesCS2A01G213000 chr2A 88.166 676 19 17 6880 7515 777757764 777757110 0.000000e+00 749.0
3 TraesCS2A01G213000 chr2A 94.194 155 8 1 1 154 498009816 498009970 1.260000e-57 235.0
4 TraesCS2A01G213000 chr2A 90.173 173 15 2 298 470 746687374 746687204 2.730000e-54 224.0
5 TraesCS2A01G213000 chr2A 92.857 154 10 1 1 154 233378546 233378698 9.810000e-54 222.0
6 TraesCS2A01G213000 chr2A 91.558 154 9 3 1 154 565578754 565578903 7.640000e-50 209.0
7 TraesCS2A01G213000 chr2B 91.515 1155 71 15 1295 2437 238955223 238956362 0.000000e+00 1565.0
8 TraesCS2A01G213000 chr2B 93.814 873 38 6 5369 6238 238959729 238960588 0.000000e+00 1299.0
9 TraesCS2A01G213000 chr2B 94.135 682 13 7 2421 3090 238956691 238957357 0.000000e+00 1013.0
10 TraesCS2A01G213000 chr2B 88.443 822 40 28 6730 7515 10604929 10605731 0.000000e+00 941.0
11 TraesCS2A01G213000 chr2B 95.494 466 16 3 4307 4772 238958659 238959119 0.000000e+00 739.0
12 TraesCS2A01G213000 chr2B 91.392 546 31 6 706 1249 238954571 238955102 0.000000e+00 734.0
13 TraesCS2A01G213000 chr2B 91.189 488 24 4 3342 3829 238957700 238958168 0.000000e+00 645.0
14 TraesCS2A01G213000 chr2B 91.860 344 17 4 6388 6730 238960815 238961148 3.170000e-128 470.0
15 TraesCS2A01G213000 chr2B 94.378 249 12 1 3869 4117 238958238 238958484 1.530000e-101 381.0
16 TraesCS2A01G213000 chr2B 89.591 269 17 5 3088 3345 238957401 238957669 1.560000e-86 331.0
17 TraesCS2A01G213000 chr2B 88.571 175 7 6 5089 5261 238959193 238959356 4.600000e-47 200.0
18 TraesCS2A01G213000 chr2B 83.616 177 17 10 531 706 715025146 715024981 1.010000e-33 156.0
19 TraesCS2A01G213000 chr2B 82.456 171 21 7 536 706 156316391 156316552 2.830000e-29 141.0
20 TraesCS2A01G213000 chr2B 88.235 119 12 2 1636 1753 234367756 234367873 2.830000e-29 141.0
21 TraesCS2A01G213000 chr2B 91.071 56 5 0 1748 1803 275316900 275316955 8.090000e-10 76.8
22 TraesCS2A01G213000 chr2D 93.340 991 58 5 1250 2237 182730733 182731718 0.000000e+00 1458.0
23 TraesCS2A01G213000 chr2D 95.869 823 22 6 2275 3090 182731715 182732532 0.000000e+00 1321.0
24 TraesCS2A01G213000 chr2D 92.352 876 34 12 5362 6215 182734806 182735670 0.000000e+00 1216.0
25 TraesCS2A01G213000 chr2D 94.862 545 18 4 706 1249 182730142 182730677 0.000000e+00 843.0
26 TraesCS2A01G213000 chr2D 93.648 488 25 2 3342 3829 182732864 182733345 0.000000e+00 725.0
27 TraesCS2A01G213000 chr2D 83.751 837 49 35 6729 7515 233436272 233435473 0.000000e+00 712.0
28 TraesCS2A01G213000 chr2D 94.030 335 7 4 4447 4772 182734017 182734347 5.240000e-136 496.0
29 TraesCS2A01G213000 chr2D 86.383 470 31 21 6265 6730 182735665 182736105 4.080000e-132 483.0
30 TraesCS2A01G213000 chr2D 94.779 249 9 2 3869 4117 182733415 182733659 1.180000e-102 385.0
31 TraesCS2A01G213000 chr2D 92.593 243 13 4 5089 5329 182734421 182734660 2.010000e-90 344.0
32 TraesCS2A01G213000 chr2D 87.739 261 26 4 3088 3345 182732576 182732833 4.410000e-77 300.0
33 TraesCS2A01G213000 chr2D 92.935 184 10 2 4268 4448 182733673 182733856 1.610000e-66 265.0
34 TraesCS2A01G213000 chr2D 92.135 178 12 2 298 475 246703549 246703724 4.500000e-62 250.0
35 TraesCS2A01G213000 chr2D 95.172 145 7 0 154 298 186225776 186225920 5.870000e-56 230.0
36 TraesCS2A01G213000 chr2D 94.483 145 8 0 154 298 478982034 478981890 2.730000e-54 224.0
37 TraesCS2A01G213000 chr2D 88.889 72 8 0 1682 1753 177457796 177457867 1.040000e-13 89.8
38 TraesCS2A01G213000 chr2D 95.349 43 2 0 621 663 631547522 631547480 1.350000e-07 69.4
39 TraesCS2A01G213000 chr2D 94.444 36 1 1 671 706 266422200 266422166 4.000000e-03 54.7
40 TraesCS2A01G213000 chr1A 89.563 824 30 18 6732 7515 564324149 564324956 0.000000e+00 994.0
41 TraesCS2A01G213000 chr1A 89.610 154 15 1 1 154 67866683 67866835 2.140000e-45 195.0
42 TraesCS2A01G213000 chr1A 89.610 154 15 1 1 154 367442977 367443129 2.140000e-45 195.0
43 TraesCS2A01G213000 chr6B 83.608 1031 117 28 5355 6355 48154107 48155115 0.000000e+00 920.0
44 TraesCS2A01G213000 chr6B 87.849 823 29 20 6733 7515 14718316 14719107 0.000000e+00 900.0
45 TraesCS2A01G213000 chr6B 82.676 1039 117 32 2080 3090 48111165 48112168 0.000000e+00 863.0
46 TraesCS2A01G213000 chr6B 83.612 958 117 23 5416 6355 48122492 48123427 0.000000e+00 863.0
47 TraesCS2A01G213000 chr6B 85.748 842 47 26 6732 7515 429707812 429706986 0.000000e+00 822.0
48 TraesCS2A01G213000 chr6B 83.494 830 75 36 6728 7515 371602750 371603559 0.000000e+00 717.0
49 TraesCS2A01G213000 chr6B 84.454 476 59 10 3356 3824 48112493 48112960 8.890000e-124 455.0
50 TraesCS2A01G213000 chr6B 84.114 491 54 11 3342 3829 48152699 48153168 3.200000e-123 453.0
51 TraesCS2A01G213000 chr6B 86.235 247 30 3 4514 4759 48115019 48115262 1.610000e-66 265.0
52 TraesCS2A01G213000 chr6B 94.578 166 9 0 298 463 226362644 226362479 2.690000e-64 257.0
53 TraesCS2A01G213000 chr6B 90.556 180 15 2 298 477 114057037 114057214 3.510000e-58 237.0
54 TraesCS2A01G213000 chr6B 79.641 334 42 12 1245 1567 48110745 48111063 4.570000e-52 217.0
55 TraesCS2A01G213000 chr6B 85.405 185 15 5 6404 6584 48123550 48123726 1.670000e-41 182.0
56 TraesCS2A01G213000 chr6B 91.176 102 8 1 605 706 114527305 114527405 3.660000e-28 137.0
57 TraesCS2A01G213000 chr6B 94.595 37 2 0 3136 3172 48152486 48152522 2.930000e-04 58.4
58 TraesCS2A01G213000 chr3A 87.728 823 44 25 6731 7515 450702295 450703098 0.000000e+00 907.0
59 TraesCS2A01G213000 chr3A 93.506 154 9 1 1 154 482523878 482524030 2.110000e-55 228.0
60 TraesCS2A01G213000 chr3A 92.208 154 11 1 1 154 390720527 390720679 4.570000e-52 217.0
61 TraesCS2A01G213000 chr3A 97.917 48 1 0 1751 1798 555414908 555414861 4.830000e-12 84.2
62 TraesCS2A01G213000 chr6A 83.776 980 110 26 5355 6311 27372437 27373390 0.000000e+00 883.0
63 TraesCS2A01G213000 chr6A 84.488 909 103 26 5417 6311 27311744 27312628 0.000000e+00 863.0
64 TraesCS2A01G213000 chr6A 83.231 489 67 10 3342 3824 27307934 27308413 1.160000e-117 435.0
65 TraesCS2A01G213000 chr6A 82.367 431 53 12 2679 3090 27307188 27307614 3.340000e-93 353.0
66 TraesCS2A01G213000 chr6A 83.770 382 46 5 3342 3721 27362538 27362905 1.550000e-91 348.0
67 TraesCS2A01G213000 chr6A 82.544 338 38 9 4424 4759 27311138 27311456 2.070000e-70 278.0
68 TraesCS2A01G213000 chr6A 85.200 250 33 2 3826 4075 27371573 27371818 3.480000e-63 254.0
69 TraesCS2A01G213000 chr6A 80.240 334 39 11 1245 1567 27298806 27299123 7.590000e-55 226.0
70 TraesCS2A01G213000 chr6A 90.132 152 14 1 2 153 527506293 527506443 5.950000e-46 196.0
71 TraesCS2A01G213000 chr6A 83.500 200 12 8 6399 6583 27373529 27373722 4.660000e-37 167.0
72 TraesCS2A01G213000 chr6A 87.586 145 14 2 6403 6543 27312807 27312951 1.680000e-36 165.0
73 TraesCS2A01G213000 chr6A 94.595 37 2 0 3136 3172 27362325 27362361 2.930000e-04 58.4
74 TraesCS2A01G213000 chr3B 86.845 821 54 27 6733 7515 457210685 457211489 0.000000e+00 869.0
75 TraesCS2A01G213000 chr3B 82.390 159 20 6 548 706 708490586 708490736 1.700000e-26 132.0
76 TraesCS2A01G213000 chrUn 82.874 1016 112 29 5381 6355 306844548 306845542 0.000000e+00 856.0
77 TraesCS2A01G213000 chrUn 82.874 1016 112 29 5381 6355 306852743 306851749 0.000000e+00 856.0
78 TraesCS2A01G213000 chrUn 82.874 1016 112 29 5381 6355 322906507 322905513 0.000000e+00 856.0
79 TraesCS2A01G213000 chrUn 81.683 939 123 33 1801 2724 111330272 111331176 0.000000e+00 736.0
80 TraesCS2A01G213000 chrUn 84.859 568 61 13 2541 3090 469882430 469882990 3.960000e-152 549.0
81 TraesCS2A01G213000 chrUn 84.725 491 52 10 3342 3829 111331794 111332264 3.170000e-128 470.0
82 TraesCS2A01G213000 chrUn 83.680 337 38 6 4424 4759 316946390 316946710 1.230000e-77 302.0
83 TraesCS2A01G213000 chrUn 83.680 337 38 6 4424 4759 361831163 361830843 1.230000e-77 302.0
84 TraesCS2A01G213000 chrUn 94.545 165 9 0 298 462 74119615 74119451 9.680000e-64 255.0
85 TraesCS2A01G213000 chrUn 85.593 236 26 5 3356 3585 316943956 316944189 2.710000e-59 241.0
86 TraesCS2A01G213000 chrUn 88.776 196 22 0 998 1193 332808279 332808474 2.710000e-59 241.0
87 TraesCS2A01G213000 chrUn 88.776 196 22 0 998 1193 342444598 342444403 2.710000e-59 241.0
88 TraesCS2A01G213000 chrUn 85.593 236 26 5 3356 3585 394824316 394824549 2.710000e-59 241.0
89 TraesCS2A01G213000 chrUn 86.598 194 20 4 3631 3824 316944199 316944386 7.640000e-50 209.0
90 TraesCS2A01G213000 chrUn 86.598 194 20 4 3631 3824 394824559 394824746 7.640000e-50 209.0
91 TraesCS2A01G213000 chrUn 78.814 354 41 16 6399 6726 111334313 111334658 2.750000e-49 207.0
92 TraesCS2A01G213000 chrUn 85.795 176 14 3 6404 6576 306845665 306845832 7.750000e-40 176.0
93 TraesCS2A01G213000 chrUn 85.795 176 14 3 6404 6576 306851626 306851459 7.750000e-40 176.0
94 TraesCS2A01G213000 chrUn 85.795 176 14 3 6404 6576 322905390 322905223 7.750000e-40 176.0
95 TraesCS2A01G213000 chrUn 86.207 87 7 5 3088 3172 111331534 111331617 1.040000e-13 89.8
96 TraesCS2A01G213000 chr7D 87.818 747 49 22 6733 7451 412187802 412187070 0.000000e+00 837.0
97 TraesCS2A01G213000 chr7D 93.793 145 9 0 154 298 385908950 385908806 1.270000e-52 219.0
98 TraesCS2A01G213000 chr7D 97.436 78 2 0 7438 7515 412187117 412187040 4.730000e-27 134.0
99 TraesCS2A01G213000 chr4A 86.029 816 56 23 6735 7515 729451568 729452360 0.000000e+00 822.0
100 TraesCS2A01G213000 chr4A 82.955 176 20 8 531 706 709198890 709199055 4.700000e-32 150.0
101 TraesCS2A01G213000 chr6D 84.933 823 61 28 6733 7515 473368796 473369595 0.000000e+00 774.0
102 TraesCS2A01G213000 chr6D 89.055 201 19 3 295 494 34664414 34664612 5.820000e-61 246.0
103 TraesCS2A01G213000 chr6D 93.793 145 9 0 154 298 452223492 452223348 1.270000e-52 219.0
104 TraesCS2A01G213000 chr6D 91.071 56 5 0 1748 1803 175716436 175716491 8.090000e-10 76.8
105 TraesCS2A01G213000 chr5A 85.960 698 54 24 6760 7429 473958100 473958781 0.000000e+00 706.0
106 TraesCS2A01G213000 chr5A 92.216 167 12 1 297 463 693314784 693314949 1.260000e-57 235.0
107 TraesCS2A01G213000 chr5A 77.225 382 66 17 825 1193 623352389 623352762 3.550000e-48 204.0
108 TraesCS2A01G213000 chr5A 91.935 62 4 1 1743 1803 225599826 225599765 1.340000e-12 86.1
109 TraesCS2A01G213000 chr1B 89.104 413 25 14 6733 7142 610357601 610357996 5.240000e-136 496.0
110 TraesCS2A01G213000 chr1B 89.508 305 16 8 7224 7515 610358051 610358352 9.210000e-99 372.0
111 TraesCS2A01G213000 chr1B 85.143 175 16 5 533 706 12102294 12102459 3.610000e-38 171.0
112 TraesCS2A01G213000 chr1B 81.818 176 22 4 531 706 48281017 48280852 1.020000e-28 139.0
113 TraesCS2A01G213000 chr5D 81.675 382 59 8 1255 1634 543845371 543844999 2.630000e-79 307.0
114 TraesCS2A01G213000 chr5D 91.429 175 14 1 298 472 458905922 458906095 9.750000e-59 239.0
115 TraesCS2A01G213000 chr5D 94.483 145 8 0 154 298 229598585 229598441 2.730000e-54 224.0
116 TraesCS2A01G213000 chr5D 94.483 145 8 0 154 298 229892524 229892380 2.730000e-54 224.0
117 TraesCS2A01G213000 chr5D 94.483 145 7 1 154 298 40954920 40954777 9.810000e-54 222.0
118 TraesCS2A01G213000 chr5D 92.553 94 7 0 605 698 91657760 91657667 1.320000e-27 135.0
119 TraesCS2A01G213000 chr5D 82.635 167 16 11 542 706 232600625 232600470 1.320000e-27 135.0
120 TraesCS2A01G213000 chr5D 91.935 62 3 2 1743 1803 201667356 201667416 1.340000e-12 86.1
121 TraesCS2A01G213000 chr5D 84.483 58 8 1 5270 5327 3961136 3961080 1.000000e-03 56.5
122 TraesCS2A01G213000 chr1D 94.944 178 9 0 285 462 347413798 347413621 5.740000e-71 279.0
123 TraesCS2A01G213000 chr1D 95.172 145 7 0 154 298 329077612 329077756 5.870000e-56 230.0
124 TraesCS2A01G213000 chr1D 93.793 145 9 0 154 298 418304584 418304728 1.270000e-52 219.0
125 TraesCS2A01G213000 chr1D 81.818 165 22 5 542 706 366472316 366472472 1.700000e-26 132.0
126 TraesCS2A01G213000 chr4B 94.048 168 10 0 298 465 512755412 512755245 9.680000e-64 255.0
127 TraesCS2A01G213000 chr4B 85.185 135 11 6 574 707 83136637 83136511 6.120000e-26 130.0
128 TraesCS2A01G213000 chr4D 93.529 170 11 0 295 464 503151642 503151473 3.480000e-63 254.0
129 TraesCS2A01G213000 chr4D 91.525 177 14 1 297 473 8284426 8284251 7.530000e-60 243.0
130 TraesCS2A01G213000 chr4D 91.228 57 5 0 1752 1808 119284488 119284544 2.250000e-10 78.7
131 TraesCS2A01G213000 chr7A 90.625 192 15 3 273 464 521961367 521961179 1.250000e-62 252.0
132 TraesCS2A01G213000 chr7A 89.677 155 15 1 1 155 586627623 586627776 5.950000e-46 196.0
133 TraesCS2A01G213000 chr5B 92.045 176 14 0 295 470 106957269 106957094 1.620000e-61 248.0
134 TraesCS2A01G213000 chr5B 91.954 174 12 2 298 470 162719999 162720171 7.530000e-60 243.0
135 TraesCS2A01G213000 chr5B 90.291 103 9 1 605 707 127543176 127543075 4.730000e-27 134.0
136 TraesCS2A01G213000 chr7B 92.157 102 7 1 605 706 741330173 741330273 7.860000e-30 143.0
137 TraesCS2A01G213000 chr7B 81.988 161 21 6 543 703 655584563 655584715 6.120000e-26 130.0
138 TraesCS2A01G213000 chr7B 88.525 61 7 0 1748 1808 296332928 296332988 2.910000e-09 75.0
139 TraesCS2A01G213000 chr3D 85.034 147 13 7 562 708 398280017 398280154 2.830000e-29 141.0
140 TraesCS2A01G213000 chr3D 85.034 147 13 7 562 708 398280323 398280460 2.830000e-29 141.0
141 TraesCS2A01G213000 chr3D 80.606 165 23 7 542 706 604407216 604407371 1.320000e-22 119.0
142 TraesCS2A01G213000 chr3D 91.139 79 6 1 630 708 398280597 398280674 1.030000e-18 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G213000 chr2A 197662390 197669904 7514 False 6647.500000 8813 100.000000 1 7515 2 chr2A.!!$F4 7514
1 TraesCS2A01G213000 chr2A 777757110 777757764 654 True 749.000000 749 88.166000 6880 7515 1 chr2A.!!$R2 635
2 TraesCS2A01G213000 chr2B 10604929 10605731 802 False 941.000000 941 88.443000 6730 7515 1 chr2B.!!$F1 785
3 TraesCS2A01G213000 chr2B 238954571 238961148 6577 False 737.700000 1565 92.193900 706 6730 10 chr2B.!!$F5 6024
4 TraesCS2A01G213000 chr2D 182730142 182736105 5963 False 712.363636 1458 92.593636 706 6730 11 chr2D.!!$F4 6024
5 TraesCS2A01G213000 chr2D 233435473 233436272 799 True 712.000000 712 83.751000 6729 7515 1 chr2D.!!$R1 786
6 TraesCS2A01G213000 chr1A 564324149 564324956 807 False 994.000000 994 89.563000 6732 7515 1 chr1A.!!$F3 783
7 TraesCS2A01G213000 chr6B 14718316 14719107 791 False 900.000000 900 87.849000 6733 7515 1 chr6B.!!$F1 782
8 TraesCS2A01G213000 chr6B 429706986 429707812 826 True 822.000000 822 85.748000 6732 7515 1 chr6B.!!$R2 783
9 TraesCS2A01G213000 chr6B 371602750 371603559 809 False 717.000000 717 83.494000 6728 7515 1 chr6B.!!$F4 787
10 TraesCS2A01G213000 chr6B 48122492 48123726 1234 False 522.500000 863 84.508500 5416 6584 2 chr6B.!!$F6 1168
11 TraesCS2A01G213000 chr6B 48152486 48155115 2629 False 477.133333 920 87.439000 3136 6355 3 chr6B.!!$F7 3219
12 TraesCS2A01G213000 chr6B 48110745 48115262 4517 False 450.000000 863 83.251500 1245 4759 4 chr6B.!!$F5 3514
13 TraesCS2A01G213000 chr3A 450702295 450703098 803 False 907.000000 907 87.728000 6731 7515 1 chr3A.!!$F2 784
14 TraesCS2A01G213000 chr6A 27371573 27373722 2149 False 434.666667 883 84.158667 3826 6583 3 chr6A.!!$F5 2757
15 TraesCS2A01G213000 chr6A 27307188 27312951 5763 False 418.800000 863 84.043200 2679 6543 5 chr6A.!!$F3 3864
16 TraesCS2A01G213000 chr6A 27362325 27362905 580 False 203.200000 348 89.182500 3136 3721 2 chr6A.!!$F4 585
17 TraesCS2A01G213000 chr3B 457210685 457211489 804 False 869.000000 869 86.845000 6733 7515 1 chr3B.!!$F1 782
18 TraesCS2A01G213000 chrUn 469882430 469882990 560 False 549.000000 549 84.859000 2541 3090 1 chrUn.!!$F2 549
19 TraesCS2A01G213000 chrUn 306844548 306845832 1284 False 516.000000 856 84.334500 5381 6576 2 chrUn.!!$F4 1195
20 TraesCS2A01G213000 chrUn 306851459 306852743 1284 True 516.000000 856 84.334500 5381 6576 2 chrUn.!!$R4 1195
21 TraesCS2A01G213000 chrUn 322905223 322906507 1284 True 516.000000 856 84.334500 5381 6576 2 chrUn.!!$R5 1195
22 TraesCS2A01G213000 chrUn 111330272 111334658 4386 False 375.700000 736 82.857250 1801 6726 4 chrUn.!!$F3 4925
23 TraesCS2A01G213000 chrUn 316943956 316946710 2754 False 250.666667 302 85.290333 3356 4759 3 chrUn.!!$F5 1403
24 TraesCS2A01G213000 chr7D 412187040 412187802 762 True 485.500000 837 92.627000 6733 7515 2 chr7D.!!$R2 782
25 TraesCS2A01G213000 chr4A 729451568 729452360 792 False 822.000000 822 86.029000 6735 7515 1 chr4A.!!$F2 780
26 TraesCS2A01G213000 chr6D 473368796 473369595 799 False 774.000000 774 84.933000 6733 7515 1 chr6D.!!$F3 782
27 TraesCS2A01G213000 chr5A 473958100 473958781 681 False 706.000000 706 85.960000 6760 7429 1 chr5A.!!$F1 669
28 TraesCS2A01G213000 chr1B 610357601 610358352 751 False 434.000000 496 89.306000 6733 7515 2 chr1B.!!$F2 782

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.030504 CAAATGAGTGGTGCAACGCA 59.969 50.000 19.16 7.82 38.12 5.24 F
515 516 0.035458 AGCCTTACTCACACTGTGGC 59.965 55.000 13.09 3.76 39.19 5.01 F
533 534 0.175989 GCGCCAGCCTAAGTAGTCTT 59.824 55.000 0.00 0.00 37.42 3.01 F
581 582 0.180406 GAATCCCAGTGGCGTGGTAT 59.820 55.000 2.61 0.00 35.60 2.73 F
1876 1980 0.394899 GCTTGATAGGCTGGCCAACT 60.395 55.000 7.01 11.10 38.92 3.16 F
2989 3521 0.827089 CAGTTTGTGGTGATGGCCCA 60.827 55.000 0.00 0.00 0.00 5.36 F
4119 4875 1.492176 CCTGCTGGGTATGAGAACCAT 59.508 52.381 0.71 0.00 41.67 3.55 F
5349 8972 1.162698 GGGGAGTACCGAAGCAAAAC 58.837 55.000 0.00 0.00 41.60 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1338 1416 0.099436 CCAATTACGCCTGAAGCAGC 59.901 55.000 0.00 0.00 44.04 5.25 R
2216 2325 0.593128 GAAGCCACGTGTTGCATTCT 59.407 50.000 15.65 0.00 0.00 2.40 R
2222 2331 3.074412 AGGAATAAGAAGCCACGTGTTG 58.926 45.455 15.65 0.51 0.00 3.33 R
2547 3056 1.598701 AATGCGCTTCTTCTTGCCCC 61.599 55.000 9.73 0.00 0.00 5.80 R
3417 4070 1.199097 GCACCTTGTATCAAACCGTGG 59.801 52.381 0.00 0.00 0.00 4.94 R
4549 8036 0.376152 CAAGGACGTGCATGCTCATC 59.624 55.000 20.33 13.45 0.00 2.92 R
6031 9870 0.710567 CGTTTACGACAGCAGCAGAG 59.289 55.000 0.00 0.00 43.02 3.35 R
6990 11049 0.171903 GCGGAGTAAGTACTTGGCGA 59.828 55.000 18.56 0.00 36.50 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.434018 ACATGAGAAAATAGAGAAGCTTGC 57.566 37.500 2.10 0.00 0.00 4.01
24 25 5.356470 ACATGAGAAAATAGAGAAGCTTGCC 59.644 40.000 2.10 0.00 0.00 4.52
25 26 5.171339 TGAGAAAATAGAGAAGCTTGCCT 57.829 39.130 2.10 2.76 0.00 4.75
26 27 6.299805 TGAGAAAATAGAGAAGCTTGCCTA 57.700 37.500 2.10 5.23 0.00 3.93
27 28 6.711277 TGAGAAAATAGAGAAGCTTGCCTAA 58.289 36.000 2.10 0.00 0.00 2.69
28 29 7.341805 TGAGAAAATAGAGAAGCTTGCCTAAT 58.658 34.615 2.10 0.00 0.00 1.73
29 30 7.281774 TGAGAAAATAGAGAAGCTTGCCTAATG 59.718 37.037 2.10 0.00 0.00 1.90
30 31 7.115414 AGAAAATAGAGAAGCTTGCCTAATGT 58.885 34.615 2.10 0.00 0.00 2.71
31 32 8.267894 AGAAAATAGAGAAGCTTGCCTAATGTA 58.732 33.333 2.10 0.00 0.00 2.29
32 33 8.807948 AAAATAGAGAAGCTTGCCTAATGTAA 57.192 30.769 2.10 0.00 0.00 2.41
33 34 8.443953 AAATAGAGAAGCTTGCCTAATGTAAG 57.556 34.615 2.10 0.00 39.45 2.34
34 35 5.428184 AGAGAAGCTTGCCTAATGTAAGT 57.572 39.130 2.10 0.00 38.76 2.24
35 36 6.546428 AGAGAAGCTTGCCTAATGTAAGTA 57.454 37.500 2.10 0.00 38.76 2.24
36 37 6.947464 AGAGAAGCTTGCCTAATGTAAGTAA 58.053 36.000 2.10 0.00 38.76 2.24
37 38 7.394816 AGAGAAGCTTGCCTAATGTAAGTAAA 58.605 34.615 2.10 0.00 38.76 2.01
38 39 8.049721 AGAGAAGCTTGCCTAATGTAAGTAAAT 58.950 33.333 2.10 0.00 38.76 1.40
39 40 7.989826 AGAAGCTTGCCTAATGTAAGTAAATG 58.010 34.615 2.10 0.00 38.76 2.32
40 41 7.611855 AGAAGCTTGCCTAATGTAAGTAAATGT 59.388 33.333 2.10 0.00 38.76 2.71
41 42 8.801882 AAGCTTGCCTAATGTAAGTAAATGTA 57.198 30.769 0.00 0.00 38.76 2.29
42 43 8.801882 AGCTTGCCTAATGTAAGTAAATGTAA 57.198 30.769 0.00 0.00 38.76 2.41
43 44 9.408648 AGCTTGCCTAATGTAAGTAAATGTAAT 57.591 29.630 0.00 0.00 38.76 1.89
44 45 9.665264 GCTTGCCTAATGTAAGTAAATGTAATC 57.335 33.333 0.00 0.00 38.76 1.75
79 80 5.999205 AAAATATCCAAATGAGTGGTGCA 57.001 34.783 0.00 0.00 39.88 4.57
80 81 5.999205 AAATATCCAAATGAGTGGTGCAA 57.001 34.783 0.00 0.00 39.88 4.08
81 82 4.989279 ATATCCAAATGAGTGGTGCAAC 57.011 40.909 0.00 0.00 39.88 4.17
82 83 0.950836 TCCAAATGAGTGGTGCAACG 59.049 50.000 0.00 0.00 39.88 4.10
83 84 0.664166 CCAAATGAGTGGTGCAACGC 60.664 55.000 7.36 7.36 38.12 4.84
84 85 0.030504 CAAATGAGTGGTGCAACGCA 59.969 50.000 19.16 7.82 38.12 5.24
85 86 0.743688 AAATGAGTGGTGCAACGCAA 59.256 45.000 19.16 5.54 41.47 4.85
86 87 0.311790 AATGAGTGGTGCAACGCAAG 59.688 50.000 19.16 0.00 41.47 4.01
87 88 0.534877 ATGAGTGGTGCAACGCAAGA 60.535 50.000 19.16 0.23 41.47 3.02
88 89 1.279840 GAGTGGTGCAACGCAAGAC 59.720 57.895 19.16 0.00 41.47 3.01
89 90 1.436195 GAGTGGTGCAACGCAAGACA 61.436 55.000 19.16 0.00 41.47 3.41
90 91 1.298339 GTGGTGCAACGCAAGACAC 60.298 57.895 11.22 0.00 41.47 3.67
91 92 2.331451 GGTGCAACGCAAGACACC 59.669 61.111 0.00 0.00 46.03 4.16
92 93 3.420943 GTGCAACGCAAGACACCT 58.579 55.556 0.00 0.00 41.47 4.00
93 94 1.727467 GTGCAACGCAAGACACCTT 59.273 52.632 0.00 0.00 41.47 3.50
94 95 0.941542 GTGCAACGCAAGACACCTTA 59.058 50.000 0.00 0.00 41.47 2.69
95 96 1.535462 GTGCAACGCAAGACACCTTAT 59.465 47.619 0.00 0.00 41.47 1.73
96 97 2.739913 GTGCAACGCAAGACACCTTATA 59.260 45.455 0.00 0.00 41.47 0.98
97 98 3.374058 GTGCAACGCAAGACACCTTATAT 59.626 43.478 0.00 0.00 41.47 0.86
98 99 4.006989 TGCAACGCAAGACACCTTATATT 58.993 39.130 0.00 0.00 43.62 1.28
99 100 4.457603 TGCAACGCAAGACACCTTATATTT 59.542 37.500 0.00 0.00 43.62 1.40
100 101 5.048364 TGCAACGCAAGACACCTTATATTTT 60.048 36.000 0.00 0.00 43.62 1.82
101 102 6.149640 TGCAACGCAAGACACCTTATATTTTA 59.850 34.615 0.00 0.00 43.62 1.52
102 103 6.687105 GCAACGCAAGACACCTTATATTTTAG 59.313 38.462 0.00 0.00 43.62 1.85
103 104 7.413657 GCAACGCAAGACACCTTATATTTTAGA 60.414 37.037 0.00 0.00 43.62 2.10
104 105 8.612619 CAACGCAAGACACCTTATATTTTAGAT 58.387 33.333 0.00 0.00 43.62 1.98
105 106 8.732746 ACGCAAGACACCTTATATTTTAGATT 57.267 30.769 0.00 0.00 43.62 2.40
106 107 9.174166 ACGCAAGACACCTTATATTTTAGATTT 57.826 29.630 0.00 0.00 43.62 2.17
148 149 6.583562 ACTCCTTATATCAAAGAACGAAGGG 58.416 40.000 0.00 0.00 34.10 3.95
149 150 6.383147 ACTCCTTATATCAAAGAACGAAGGGA 59.617 38.462 0.00 0.00 34.10 4.20
150 151 6.817184 TCCTTATATCAAAGAACGAAGGGAG 58.183 40.000 0.00 0.00 34.10 4.30
151 152 6.383147 TCCTTATATCAAAGAACGAAGGGAGT 59.617 38.462 0.00 0.00 34.10 3.85
152 153 7.562454 TCCTTATATCAAAGAACGAAGGGAGTA 59.438 37.037 0.00 0.00 34.10 2.59
153 154 8.368668 CCTTATATCAAAGAACGAAGGGAGTAT 58.631 37.037 0.00 0.00 0.00 2.12
154 155 9.197694 CTTATATCAAAGAACGAAGGGAGTATG 57.802 37.037 0.00 0.00 0.00 2.39
155 156 4.884668 TCAAAGAACGAAGGGAGTATGT 57.115 40.909 0.00 0.00 0.00 2.29
156 157 4.566004 TCAAAGAACGAAGGGAGTATGTG 58.434 43.478 0.00 0.00 0.00 3.21
157 158 3.611766 AAGAACGAAGGGAGTATGTGG 57.388 47.619 0.00 0.00 0.00 4.17
158 159 2.537143 AGAACGAAGGGAGTATGTGGT 58.463 47.619 0.00 0.00 0.00 4.16
159 160 3.705051 AGAACGAAGGGAGTATGTGGTA 58.295 45.455 0.00 0.00 0.00 3.25
160 161 4.287552 AGAACGAAGGGAGTATGTGGTAT 58.712 43.478 0.00 0.00 0.00 2.73
161 162 4.341520 AGAACGAAGGGAGTATGTGGTATC 59.658 45.833 0.00 0.00 0.00 2.24
162 163 3.638860 ACGAAGGGAGTATGTGGTATCA 58.361 45.455 0.00 0.00 0.00 2.15
163 164 4.223953 ACGAAGGGAGTATGTGGTATCAT 58.776 43.478 0.00 0.00 0.00 2.45
164 165 4.039245 ACGAAGGGAGTATGTGGTATCATG 59.961 45.833 0.00 0.00 0.00 3.07
165 166 4.319177 GAAGGGAGTATGTGGTATCATGC 58.681 47.826 0.00 0.00 0.00 4.06
166 167 3.317406 AGGGAGTATGTGGTATCATGCA 58.683 45.455 0.00 0.00 33.91 3.96
167 168 3.716353 AGGGAGTATGTGGTATCATGCAA 59.284 43.478 0.00 0.00 33.91 4.08
168 169 4.067896 GGGAGTATGTGGTATCATGCAAG 58.932 47.826 0.00 0.00 33.91 4.01
169 170 4.202357 GGGAGTATGTGGTATCATGCAAGA 60.202 45.833 0.00 0.00 33.91 3.02
170 171 4.752101 GGAGTATGTGGTATCATGCAAGAC 59.248 45.833 0.00 0.00 33.91 3.01
171 172 5.357742 AGTATGTGGTATCATGCAAGACA 57.642 39.130 0.00 0.00 33.91 3.41
172 173 5.933617 AGTATGTGGTATCATGCAAGACAT 58.066 37.500 0.00 0.00 40.66 3.06
173 174 5.994054 AGTATGTGGTATCATGCAAGACATC 59.006 40.000 0.00 0.00 36.64 3.06
174 175 4.219264 TGTGGTATCATGCAAGACATCA 57.781 40.909 0.00 0.00 36.64 3.07
175 176 4.784177 TGTGGTATCATGCAAGACATCAT 58.216 39.130 0.00 0.00 36.64 2.45
176 177 5.195185 TGTGGTATCATGCAAGACATCATT 58.805 37.500 0.00 0.00 36.64 2.57
177 178 5.653330 TGTGGTATCATGCAAGACATCATTT 59.347 36.000 0.00 0.00 36.64 2.32
178 179 6.827762 TGTGGTATCATGCAAGACATCATTTA 59.172 34.615 0.00 0.00 36.64 1.40
179 180 7.503230 TGTGGTATCATGCAAGACATCATTTAT 59.497 33.333 0.00 0.00 36.64 1.40
180 181 8.355169 GTGGTATCATGCAAGACATCATTTATT 58.645 33.333 0.00 0.00 36.64 1.40
181 182 9.571816 TGGTATCATGCAAGACATCATTTATTA 57.428 29.630 0.00 0.00 36.64 0.98
205 206 9.996554 TTAAGATGTAGACTCATTTTGTCTTGA 57.003 29.630 1.67 0.00 41.45 3.02
206 207 8.545229 AAGATGTAGACTCATTTTGTCTTGAG 57.455 34.615 1.67 0.00 41.45 3.02
207 208 7.901029 AGATGTAGACTCATTTTGTCTTGAGA 58.099 34.615 6.91 0.00 41.45 3.27
208 209 8.538701 AGATGTAGACTCATTTTGTCTTGAGAT 58.461 33.333 6.91 0.00 41.45 2.75
209 210 7.895975 TGTAGACTCATTTTGTCTTGAGATG 57.104 36.000 6.91 0.00 41.45 2.90
210 211 5.876612 AGACTCATTTTGTCTTGAGATGC 57.123 39.130 6.91 0.00 41.45 3.91
211 212 4.391216 AGACTCATTTTGTCTTGAGATGCG 59.609 41.667 6.91 0.00 41.45 4.73
212 213 4.067896 ACTCATTTTGTCTTGAGATGCGT 58.932 39.130 6.91 0.00 41.53 5.24
213 214 4.516698 ACTCATTTTGTCTTGAGATGCGTT 59.483 37.500 6.91 0.00 41.53 4.84
214 215 5.700832 ACTCATTTTGTCTTGAGATGCGTTA 59.299 36.000 6.91 0.00 41.53 3.18
215 216 6.372659 ACTCATTTTGTCTTGAGATGCGTTAT 59.627 34.615 6.91 0.00 41.53 1.89
216 217 7.094634 ACTCATTTTGTCTTGAGATGCGTTATT 60.095 33.333 6.91 0.00 41.53 1.40
217 218 7.592938 TCATTTTGTCTTGAGATGCGTTATTT 58.407 30.769 0.00 0.00 0.00 1.40
218 219 8.081633 TCATTTTGTCTTGAGATGCGTTATTTT 58.918 29.630 0.00 0.00 0.00 1.82
219 220 9.340695 CATTTTGTCTTGAGATGCGTTATTTTA 57.659 29.630 0.00 0.00 0.00 1.52
220 221 8.722342 TTTTGTCTTGAGATGCGTTATTTTAC 57.278 30.769 0.00 0.00 0.00 2.01
221 222 6.089920 TGTCTTGAGATGCGTTATTTTACG 57.910 37.500 0.00 0.00 44.09 3.18
222 223 5.062934 TGTCTTGAGATGCGTTATTTTACGG 59.937 40.000 0.00 0.00 41.65 4.02
223 224 5.063060 GTCTTGAGATGCGTTATTTTACGGT 59.937 40.000 0.00 0.00 41.65 4.83
224 225 6.254157 GTCTTGAGATGCGTTATTTTACGGTA 59.746 38.462 0.00 0.00 41.65 4.02
225 226 6.812656 TCTTGAGATGCGTTATTTTACGGTAA 59.187 34.615 0.00 0.00 41.65 2.85
226 227 6.335176 TGAGATGCGTTATTTTACGGTAAC 57.665 37.500 0.00 0.00 41.65 2.50
227 228 5.868258 TGAGATGCGTTATTTTACGGTAACA 59.132 36.000 0.00 0.00 41.65 2.41
228 229 6.098367 AGATGCGTTATTTTACGGTAACAC 57.902 37.500 0.00 0.00 41.65 3.32
229 230 5.638657 AGATGCGTTATTTTACGGTAACACA 59.361 36.000 0.00 0.00 41.65 3.72
230 231 5.859521 TGCGTTATTTTACGGTAACACAT 57.140 34.783 0.00 0.00 41.65 3.21
231 232 6.238610 TGCGTTATTTTACGGTAACACATT 57.761 33.333 0.00 0.00 41.65 2.71
232 233 7.356641 TGCGTTATTTTACGGTAACACATTA 57.643 32.000 0.00 0.00 41.65 1.90
233 234 7.972527 TGCGTTATTTTACGGTAACACATTAT 58.027 30.769 0.00 0.00 41.65 1.28
234 235 7.903946 TGCGTTATTTTACGGTAACACATTATG 59.096 33.333 0.00 0.00 41.65 1.90
235 236 7.904461 GCGTTATTTTACGGTAACACATTATGT 59.096 33.333 0.00 0.00 41.90 2.29
236 237 9.757859 CGTTATTTTACGGTAACACATTATGTT 57.242 29.630 0.00 0.00 44.40 2.71
248 249 6.569179 ACACATTATGTTACTCCAAACACC 57.431 37.500 0.00 0.00 41.89 4.16
249 250 6.303839 ACACATTATGTTACTCCAAACACCT 58.696 36.000 0.00 0.00 41.89 4.00
250 251 6.430000 ACACATTATGTTACTCCAAACACCTC 59.570 38.462 0.00 0.00 41.89 3.85
251 252 6.655003 CACATTATGTTACTCCAAACACCTCT 59.345 38.462 0.00 0.00 41.89 3.69
252 253 6.879458 ACATTATGTTACTCCAAACACCTCTC 59.121 38.462 0.00 0.00 41.89 3.20
253 254 6.681729 TTATGTTACTCCAAACACCTCTCT 57.318 37.500 0.00 0.00 41.89 3.10
254 255 4.602340 TGTTACTCCAAACACCTCTCTC 57.398 45.455 0.00 0.00 34.50 3.20
255 256 3.323979 TGTTACTCCAAACACCTCTCTCC 59.676 47.826 0.00 0.00 34.50 3.71
256 257 2.407340 ACTCCAAACACCTCTCTCCT 57.593 50.000 0.00 0.00 0.00 3.69
257 258 2.252714 ACTCCAAACACCTCTCTCCTC 58.747 52.381 0.00 0.00 0.00 3.71
258 259 2.251818 CTCCAAACACCTCTCTCCTCA 58.748 52.381 0.00 0.00 0.00 3.86
259 260 2.836981 CTCCAAACACCTCTCTCCTCAT 59.163 50.000 0.00 0.00 0.00 2.90
260 261 3.251484 TCCAAACACCTCTCTCCTCATT 58.749 45.455 0.00 0.00 0.00 2.57
261 262 4.425772 TCCAAACACCTCTCTCCTCATTA 58.574 43.478 0.00 0.00 0.00 1.90
262 263 4.844085 TCCAAACACCTCTCTCCTCATTAA 59.156 41.667 0.00 0.00 0.00 1.40
263 264 5.046304 TCCAAACACCTCTCTCCTCATTAAG 60.046 44.000 0.00 0.00 0.00 1.85
264 265 5.280215 CCAAACACCTCTCTCCTCATTAAGT 60.280 44.000 0.00 0.00 0.00 2.24
265 266 6.070767 CCAAACACCTCTCTCCTCATTAAGTA 60.071 42.308 0.00 0.00 0.00 2.24
266 267 6.532988 AACACCTCTCTCCTCATTAAGTAC 57.467 41.667 0.00 0.00 0.00 2.73
267 268 5.580998 ACACCTCTCTCCTCATTAAGTACA 58.419 41.667 0.00 0.00 0.00 2.90
268 269 6.198639 ACACCTCTCTCCTCATTAAGTACAT 58.801 40.000 0.00 0.00 0.00 2.29
269 270 6.097554 ACACCTCTCTCCTCATTAAGTACATG 59.902 42.308 0.00 0.00 0.00 3.21
270 271 5.069781 ACCTCTCTCCTCATTAAGTACATGC 59.930 44.000 0.00 0.00 0.00 4.06
271 272 5.510520 CCTCTCTCCTCATTAAGTACATGCC 60.511 48.000 0.00 0.00 0.00 4.40
272 273 4.962362 TCTCTCCTCATTAAGTACATGCCA 59.038 41.667 0.00 0.00 0.00 4.92
273 274 5.023533 TCTCCTCATTAAGTACATGCCAC 57.976 43.478 0.00 0.00 0.00 5.01
274 275 4.469586 TCTCCTCATTAAGTACATGCCACA 59.530 41.667 0.00 0.00 0.00 4.17
275 276 5.130975 TCTCCTCATTAAGTACATGCCACAT 59.869 40.000 0.00 0.00 0.00 3.21
276 277 6.326323 TCTCCTCATTAAGTACATGCCACATA 59.674 38.462 0.00 0.00 0.00 2.29
277 278 6.894682 TCCTCATTAAGTACATGCCACATAA 58.105 36.000 0.00 0.00 0.00 1.90
278 279 6.992123 TCCTCATTAAGTACATGCCACATAAG 59.008 38.462 0.00 0.00 0.00 1.73
279 280 6.293626 CCTCATTAAGTACATGCCACATAAGC 60.294 42.308 0.00 0.00 0.00 3.09
280 281 6.118852 TCATTAAGTACATGCCACATAAGCA 58.881 36.000 0.00 0.00 45.94 3.91
281 282 6.601217 TCATTAAGTACATGCCACATAAGCAA 59.399 34.615 0.00 0.00 44.83 3.91
282 283 6.825944 TTAAGTACATGCCACATAAGCAAA 57.174 33.333 0.00 0.00 44.83 3.68
283 284 5.920193 AAGTACATGCCACATAAGCAAAT 57.080 34.783 0.00 0.00 44.83 2.32
284 285 5.920193 AGTACATGCCACATAAGCAAATT 57.080 34.783 0.00 0.00 44.83 1.82
285 286 6.284891 AGTACATGCCACATAAGCAAATTT 57.715 33.333 0.00 0.00 44.83 1.82
286 287 6.700352 AGTACATGCCACATAAGCAAATTTT 58.300 32.000 0.00 0.00 44.83 1.82
287 288 7.160726 AGTACATGCCACATAAGCAAATTTTT 58.839 30.769 0.00 0.00 44.83 1.94
288 289 6.484818 ACATGCCACATAAGCAAATTTTTC 57.515 33.333 0.00 0.00 44.83 2.29
289 290 6.232692 ACATGCCACATAAGCAAATTTTTCT 58.767 32.000 0.00 0.00 44.83 2.52
290 291 6.711645 ACATGCCACATAAGCAAATTTTTCTT 59.288 30.769 0.00 7.40 44.83 2.52
291 292 6.542574 TGCCACATAAGCAAATTTTTCTTG 57.457 33.333 10.97 1.87 37.28 3.02
292 293 5.469421 TGCCACATAAGCAAATTTTTCTTGG 59.531 36.000 10.97 6.88 37.28 3.61
293 294 5.106594 GCCACATAAGCAAATTTTTCTTGGG 60.107 40.000 10.97 8.73 0.00 4.12
294 295 6.229733 CCACATAAGCAAATTTTTCTTGGGA 58.770 36.000 10.97 0.00 0.00 4.37
295 296 6.880529 CCACATAAGCAAATTTTTCTTGGGAT 59.119 34.615 10.97 0.00 0.00 3.85
296 297 7.148373 CCACATAAGCAAATTTTTCTTGGGATG 60.148 37.037 10.97 9.51 0.00 3.51
297 298 7.388500 CACATAAGCAAATTTTTCTTGGGATGT 59.612 33.333 10.97 9.95 0.00 3.06
298 299 8.592809 ACATAAGCAAATTTTTCTTGGGATGTA 58.407 29.630 10.97 0.00 0.00 2.29
299 300 8.872845 CATAAGCAAATTTTTCTTGGGATGTAC 58.127 33.333 10.97 0.00 0.00 2.90
300 301 6.670695 AGCAAATTTTTCTTGGGATGTACT 57.329 33.333 0.00 0.00 0.00 2.73
301 302 6.691508 AGCAAATTTTTCTTGGGATGTACTC 58.308 36.000 0.00 0.00 0.00 2.59
302 303 5.869344 GCAAATTTTTCTTGGGATGTACTCC 59.131 40.000 0.00 0.00 44.11 3.85
311 312 2.598686 GGATGTACTCCCTCCGTTTC 57.401 55.000 0.00 0.00 38.19 2.78
312 313 2.108970 GGATGTACTCCCTCCGTTTCT 58.891 52.381 0.00 0.00 38.19 2.52
313 314 3.294214 GGATGTACTCCCTCCGTTTCTA 58.706 50.000 0.00 0.00 38.19 2.10
314 315 3.703052 GGATGTACTCCCTCCGTTTCTAA 59.297 47.826 0.00 0.00 38.19 2.10
315 316 4.161001 GGATGTACTCCCTCCGTTTCTAAA 59.839 45.833 0.00 0.00 38.19 1.85
316 317 5.163332 GGATGTACTCCCTCCGTTTCTAAAT 60.163 44.000 0.00 0.00 38.19 1.40
317 318 6.041296 GGATGTACTCCCTCCGTTTCTAAATA 59.959 42.308 0.00 0.00 38.19 1.40
318 319 7.256225 GGATGTACTCCCTCCGTTTCTAAATAT 60.256 40.741 0.00 0.00 38.19 1.28
319 320 7.427989 TGTACTCCCTCCGTTTCTAAATATT 57.572 36.000 0.00 0.00 0.00 1.28
320 321 7.854337 TGTACTCCCTCCGTTTCTAAATATTT 58.146 34.615 5.89 5.89 0.00 1.40
321 322 7.767198 TGTACTCCCTCCGTTTCTAAATATTTG 59.233 37.037 11.05 1.65 0.00 2.32
322 323 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
323 324 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
324 325 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
325 326 7.399634 TCCCTCCGTTTCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
326 327 7.886446 TCCCTCCGTTTCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
327 328 8.182227 CCCTCCGTTTCTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
328 329 8.947115 CCTCCGTTTCTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
346 347 9.996554 TGTCTTTCTAGATATTTCAACAAGTGA 57.003 29.630 0.00 0.00 31.86 3.41
355 356 9.302345 AGATATTTCAACAAGTGACTACATACG 57.698 33.333 0.00 0.00 35.39 3.06
356 357 6.721571 ATTTCAACAAGTGACTACATACGG 57.278 37.500 0.00 0.00 35.39 4.02
357 358 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
358 359 5.456548 TCAACAAGTGACTACATACGGAA 57.543 39.130 0.00 0.00 0.00 4.30
359 360 5.224888 TCAACAAGTGACTACATACGGAAC 58.775 41.667 0.00 0.00 0.00 3.62
360 361 4.859304 ACAAGTGACTACATACGGAACA 57.141 40.909 0.00 0.00 0.00 3.18
361 362 5.204409 ACAAGTGACTACATACGGAACAA 57.796 39.130 0.00 0.00 0.00 2.83
362 363 5.603596 ACAAGTGACTACATACGGAACAAA 58.396 37.500 0.00 0.00 0.00 2.83
363 364 6.050432 ACAAGTGACTACATACGGAACAAAA 58.950 36.000 0.00 0.00 0.00 2.44
364 365 6.708949 ACAAGTGACTACATACGGAACAAAAT 59.291 34.615 0.00 0.00 0.00 1.82
365 366 7.874016 ACAAGTGACTACATACGGAACAAAATA 59.126 33.333 0.00 0.00 0.00 1.40
366 367 8.714179 CAAGTGACTACATACGGAACAAAATAA 58.286 33.333 0.00 0.00 0.00 1.40
367 368 8.475331 AGTGACTACATACGGAACAAAATAAG 57.525 34.615 0.00 0.00 0.00 1.73
368 369 8.092687 AGTGACTACATACGGAACAAAATAAGT 58.907 33.333 0.00 0.00 0.00 2.24
369 370 9.357652 GTGACTACATACGGAACAAAATAAGTA 57.642 33.333 0.00 0.00 0.00 2.24
370 371 9.926158 TGACTACATACGGAACAAAATAAGTAA 57.074 29.630 0.00 0.00 0.00 2.24
379 380 9.498176 ACGGAACAAAATAAGTAAATCTACACT 57.502 29.630 0.00 0.00 0.00 3.55
380 381 9.968743 CGGAACAAAATAAGTAAATCTACACTC 57.031 33.333 0.00 0.00 0.00 3.51
416 417 4.806330 CATACATCCGTATGTGGTAGTCC 58.194 47.826 3.56 0.00 46.70 3.85
417 418 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
418 419 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
419 420 4.476297 ACATCCGTATGTGGTAGTCCATA 58.524 43.478 0.00 0.00 44.79 2.74
420 421 5.084519 ACATCCGTATGTGGTAGTCCATAT 58.915 41.667 0.00 2.47 44.79 1.78
421 422 5.047306 ACATCCGTATGTGGTAGTCCATATG 60.047 44.000 0.00 0.00 44.79 1.78
422 423 4.732065 TCCGTATGTGGTAGTCCATATGA 58.268 43.478 3.65 0.00 46.20 2.15
423 424 5.141910 TCCGTATGTGGTAGTCCATATGAA 58.858 41.667 3.65 0.00 46.20 2.57
424 425 5.599242 TCCGTATGTGGTAGTCCATATGAAA 59.401 40.000 3.65 0.00 46.20 2.69
425 426 6.269077 TCCGTATGTGGTAGTCCATATGAAAT 59.731 38.462 3.65 0.00 46.20 2.17
426 427 6.368791 CCGTATGTGGTAGTCCATATGAAATG 59.631 42.308 3.65 0.00 46.20 2.32
427 428 6.929049 CGTATGTGGTAGTCCATATGAAATGT 59.071 38.462 3.65 0.00 46.20 2.71
428 429 7.116376 CGTATGTGGTAGTCCATATGAAATGTC 59.884 40.741 3.65 0.00 46.20 3.06
429 430 6.560003 TGTGGTAGTCCATATGAAATGTCT 57.440 37.500 3.65 0.00 46.20 3.41
430 431 7.669089 TGTGGTAGTCCATATGAAATGTCTA 57.331 36.000 3.65 0.00 46.20 2.59
431 432 7.726216 TGTGGTAGTCCATATGAAATGTCTAG 58.274 38.462 3.65 0.00 46.20 2.43
432 433 7.563556 TGTGGTAGTCCATATGAAATGTCTAGA 59.436 37.037 3.65 0.00 46.20 2.43
433 434 8.421784 GTGGTAGTCCATATGAAATGTCTAGAA 58.578 37.037 3.65 0.00 46.20 2.10
434 435 8.988060 TGGTAGTCCATATGAAATGTCTAGAAA 58.012 33.333 3.65 0.00 39.03 2.52
435 436 9.482627 GGTAGTCCATATGAAATGTCTAGAAAG 57.517 37.037 3.65 0.00 0.00 2.62
453 454 9.635520 TCTAGAAAGACAAATACTTAGAAACGG 57.364 33.333 0.00 0.00 0.00 4.44
454 455 9.635520 CTAGAAAGACAAATACTTAGAAACGGA 57.364 33.333 0.00 0.00 0.00 4.69
455 456 8.535690 AGAAAGACAAATACTTAGAAACGGAG 57.464 34.615 0.00 0.00 0.00 4.63
456 457 8.365647 AGAAAGACAAATACTTAGAAACGGAGA 58.634 33.333 0.00 0.00 0.00 3.71
457 458 8.535690 AAAGACAAATACTTAGAAACGGAGAG 57.464 34.615 0.00 0.00 0.00 3.20
458 459 7.463961 AGACAAATACTTAGAAACGGAGAGA 57.536 36.000 0.00 0.00 0.00 3.10
459 460 7.540299 AGACAAATACTTAGAAACGGAGAGAG 58.460 38.462 0.00 0.00 0.00 3.20
460 461 7.177041 AGACAAATACTTAGAAACGGAGAGAGT 59.823 37.037 0.00 0.00 0.00 3.24
461 462 8.345724 ACAAATACTTAGAAACGGAGAGAGTA 57.654 34.615 0.00 0.00 0.00 2.59
462 463 8.968969 ACAAATACTTAGAAACGGAGAGAGTAT 58.031 33.333 0.00 0.00 32.04 2.12
463 464 9.804758 CAAATACTTAGAAACGGAGAGAGTATT 57.195 33.333 0.00 0.00 39.29 1.89
466 467 7.014092 ACTTAGAAACGGAGAGAGTATTACG 57.986 40.000 0.00 0.00 0.00 3.18
467 468 6.597280 ACTTAGAAACGGAGAGAGTATTACGT 59.403 38.462 0.00 0.00 35.95 3.57
468 469 5.893897 AGAAACGGAGAGAGTATTACGTT 57.106 39.130 0.00 0.00 45.05 3.99
469 470 6.992063 AGAAACGGAGAGAGTATTACGTTA 57.008 37.500 0.00 0.00 42.75 3.18
470 471 6.780127 AGAAACGGAGAGAGTATTACGTTAC 58.220 40.000 0.00 0.00 42.75 2.50
471 472 6.597280 AGAAACGGAGAGAGTATTACGTTACT 59.403 38.462 0.00 0.00 42.75 2.24
472 473 6.749923 AACGGAGAGAGTATTACGTTACTT 57.250 37.500 0.00 0.00 41.92 2.24
473 474 6.116680 ACGGAGAGAGTATTACGTTACTTG 57.883 41.667 0.00 0.00 32.59 3.16
474 475 4.968788 CGGAGAGAGTATTACGTTACTTGC 59.031 45.833 0.00 0.00 32.59 4.01
475 476 5.220815 CGGAGAGAGTATTACGTTACTTGCT 60.221 44.000 0.00 0.00 32.59 3.91
476 477 6.018425 CGGAGAGAGTATTACGTTACTTGCTA 60.018 42.308 0.00 0.00 32.59 3.49
477 478 7.466455 CGGAGAGAGTATTACGTTACTTGCTAA 60.466 40.741 0.00 0.00 32.59 3.09
478 479 7.856894 GGAGAGAGTATTACGTTACTTGCTAAG 59.143 40.741 0.00 0.00 32.59 2.18
479 480 8.278729 AGAGAGTATTACGTTACTTGCTAAGT 57.721 34.615 0.00 6.74 45.40 2.24
480 481 8.738106 AGAGAGTATTACGTTACTTGCTAAGTT 58.262 33.333 0.00 0.00 42.81 2.66
481 482 9.994432 GAGAGTATTACGTTACTTGCTAAGTTA 57.006 33.333 0.00 0.00 42.81 2.24
482 483 9.780413 AGAGTATTACGTTACTTGCTAAGTTAC 57.220 33.333 0.00 7.26 42.81 2.50
483 484 9.780413 GAGTATTACGTTACTTGCTAAGTTACT 57.220 33.333 0.00 9.77 42.81 2.24
486 487 7.873739 TTACGTTACTTGCTAAGTTACTTCC 57.126 36.000 0.00 0.00 42.81 3.46
487 488 5.846203 ACGTTACTTGCTAAGTTACTTCCA 58.154 37.500 0.00 0.00 42.81 3.53
488 489 5.693555 ACGTTACTTGCTAAGTTACTTCCAC 59.306 40.000 0.00 0.00 42.81 4.02
489 490 5.924825 CGTTACTTGCTAAGTTACTTCCACT 59.075 40.000 0.00 0.00 42.81 4.00
490 491 6.128902 CGTTACTTGCTAAGTTACTTCCACTG 60.129 42.308 0.00 0.00 42.81 3.66
491 492 5.291905 ACTTGCTAAGTTACTTCCACTGT 57.708 39.130 0.00 0.39 39.04 3.55
492 493 5.057149 ACTTGCTAAGTTACTTCCACTGTG 58.943 41.667 0.00 0.00 39.04 3.66
493 494 4.948341 TGCTAAGTTACTTCCACTGTGA 57.052 40.909 9.86 0.00 0.00 3.58
494 495 4.628074 TGCTAAGTTACTTCCACTGTGAC 58.372 43.478 9.86 0.00 0.00 3.67
495 496 3.995048 GCTAAGTTACTTCCACTGTGACC 59.005 47.826 9.86 0.00 0.00 4.02
496 497 4.502604 GCTAAGTTACTTCCACTGTGACCA 60.503 45.833 9.86 0.00 0.00 4.02
497 498 3.753294 AGTTACTTCCACTGTGACCAG 57.247 47.619 9.86 4.47 44.68 4.00
498 499 2.143925 GTTACTTCCACTGTGACCAGC 58.856 52.381 9.86 0.00 42.81 4.85
499 500 0.685097 TACTTCCACTGTGACCAGCC 59.315 55.000 9.86 0.00 42.81 4.85
500 501 1.056700 ACTTCCACTGTGACCAGCCT 61.057 55.000 9.86 0.00 42.81 4.58
501 502 0.109342 CTTCCACTGTGACCAGCCTT 59.891 55.000 9.86 0.00 42.81 4.35
502 503 1.347707 CTTCCACTGTGACCAGCCTTA 59.652 52.381 9.86 0.00 42.81 2.69
503 504 0.685097 TCCACTGTGACCAGCCTTAC 59.315 55.000 9.86 0.00 42.81 2.34
504 505 0.687354 CCACTGTGACCAGCCTTACT 59.313 55.000 9.86 0.00 42.81 2.24
505 506 1.338200 CCACTGTGACCAGCCTTACTC 60.338 57.143 9.86 0.00 42.81 2.59
506 507 1.344438 CACTGTGACCAGCCTTACTCA 59.656 52.381 0.32 0.00 42.81 3.41
507 508 1.344763 ACTGTGACCAGCCTTACTCAC 59.655 52.381 0.00 0.00 42.81 3.51
508 509 1.344438 CTGTGACCAGCCTTACTCACA 59.656 52.381 0.00 0.00 40.51 3.58
509 510 1.070134 TGTGACCAGCCTTACTCACAC 59.930 52.381 0.00 0.00 38.45 3.82
510 511 1.344763 GTGACCAGCCTTACTCACACT 59.655 52.381 0.00 0.00 34.38 3.55
511 512 1.344438 TGACCAGCCTTACTCACACTG 59.656 52.381 0.00 0.00 0.00 3.66
512 513 1.344763 GACCAGCCTTACTCACACTGT 59.655 52.381 0.00 0.00 0.00 3.55
513 514 1.070758 ACCAGCCTTACTCACACTGTG 59.929 52.381 6.19 6.19 34.45 3.66
514 515 1.609061 CCAGCCTTACTCACACTGTGG 60.609 57.143 13.09 3.13 33.87 4.17
515 516 0.035458 AGCCTTACTCACACTGTGGC 59.965 55.000 13.09 3.76 39.19 5.01
516 517 1.291877 GCCTTACTCACACTGTGGCG 61.292 60.000 13.09 2.94 33.87 5.69
517 518 1.291877 CCTTACTCACACTGTGGCGC 61.292 60.000 13.09 0.00 33.87 6.53
518 519 1.291877 CTTACTCACACTGTGGCGCC 61.292 60.000 22.73 22.73 33.87 6.53
519 520 2.034048 TTACTCACACTGTGGCGCCA 62.034 55.000 29.03 29.03 33.87 5.69
520 521 2.434658 TACTCACACTGTGGCGCCAG 62.435 60.000 33.73 22.63 38.45 4.85
531 532 4.421952 GCGCCAGCCTAAGTAGTC 57.578 61.111 0.00 0.00 37.42 2.59
532 533 1.817209 GCGCCAGCCTAAGTAGTCT 59.183 57.895 0.00 0.00 37.42 3.24
533 534 0.175989 GCGCCAGCCTAAGTAGTCTT 59.824 55.000 0.00 0.00 37.42 3.01
534 535 1.407979 GCGCCAGCCTAAGTAGTCTTA 59.592 52.381 0.00 0.00 37.42 2.10
535 536 2.798853 GCGCCAGCCTAAGTAGTCTTAC 60.799 54.545 0.00 0.00 37.42 2.34
536 537 2.541178 CGCCAGCCTAAGTAGTCTTACG 60.541 54.545 0.00 0.00 34.88 3.18
537 538 2.426381 GCCAGCCTAAGTAGTCTTACGT 59.574 50.000 0.00 0.00 34.88 3.57
538 539 3.629398 GCCAGCCTAAGTAGTCTTACGTA 59.371 47.826 0.00 0.00 34.88 3.57
539 540 4.277921 GCCAGCCTAAGTAGTCTTACGTAT 59.722 45.833 0.00 0.00 34.88 3.06
540 541 5.562501 GCCAGCCTAAGTAGTCTTACGTATC 60.563 48.000 0.00 0.00 34.88 2.24
541 542 5.333952 CCAGCCTAAGTAGTCTTACGTATCG 60.334 48.000 0.00 0.00 34.88 2.92
542 543 5.464722 CAGCCTAAGTAGTCTTACGTATCGA 59.535 44.000 0.00 0.00 34.88 3.59
543 544 6.018425 CAGCCTAAGTAGTCTTACGTATCGAA 60.018 42.308 0.00 0.00 34.88 3.71
544 545 6.202570 AGCCTAAGTAGTCTTACGTATCGAAG 59.797 42.308 0.00 0.00 34.88 3.79
545 546 6.361899 CCTAAGTAGTCTTACGTATCGAAGC 58.638 44.000 0.00 0.00 34.88 3.86
546 547 6.202570 CCTAAGTAGTCTTACGTATCGAAGCT 59.797 42.308 0.00 0.00 34.88 3.74
547 548 5.655893 AGTAGTCTTACGTATCGAAGCTC 57.344 43.478 0.00 0.00 34.88 4.09
548 549 3.589061 AGTCTTACGTATCGAAGCTCG 57.411 47.619 0.00 0.00 42.10 5.03
549 550 5.962533 AGTAGTCTTACGTATCGAAGCTCGA 60.963 44.000 10.02 10.02 42.83 4.04
550 551 7.706423 AGTAGTCTTACGTATCGAAGCTCGAG 61.706 46.154 8.45 8.45 42.37 4.04
556 557 4.161976 TCGAAGCTCGAGGTCGCG 62.162 66.667 24.84 24.84 44.82 5.87
557 558 4.161976 CGAAGCTCGAGGTCGCGA 62.162 66.667 25.95 3.71 43.74 5.87
563 564 2.125952 TCGAGGTCGCGAGTACGA 60.126 61.111 21.23 21.23 41.65 3.43
564 565 1.737735 TCGAGGTCGCGAGTACGAA 60.738 57.895 22.27 10.86 44.93 3.85
565 566 1.086067 TCGAGGTCGCGAGTACGAAT 61.086 55.000 22.27 1.10 44.93 3.34
566 567 0.653897 CGAGGTCGCGAGTACGAATC 60.654 60.000 10.24 0.00 44.93 2.52
567 568 0.316854 GAGGTCGCGAGTACGAATCC 60.317 60.000 10.24 4.17 44.93 3.01
568 569 1.298938 GGTCGCGAGTACGAATCCC 60.299 63.158 10.24 0.00 44.93 3.85
569 570 1.430632 GTCGCGAGTACGAATCCCA 59.569 57.895 10.24 0.00 44.93 4.37
570 571 0.591741 GTCGCGAGTACGAATCCCAG 60.592 60.000 10.24 0.00 44.93 4.45
571 572 1.028330 TCGCGAGTACGAATCCCAGT 61.028 55.000 3.71 0.00 39.54 4.00
572 573 0.866061 CGCGAGTACGAATCCCAGTG 60.866 60.000 0.00 0.00 42.66 3.66
573 574 0.527817 GCGAGTACGAATCCCAGTGG 60.528 60.000 0.63 0.63 42.66 4.00
574 575 0.527817 CGAGTACGAATCCCAGTGGC 60.528 60.000 2.61 0.00 42.66 5.01
575 576 0.527817 GAGTACGAATCCCAGTGGCG 60.528 60.000 2.61 4.33 0.00 5.69
576 577 1.217244 GTACGAATCCCAGTGGCGT 59.783 57.895 15.42 15.42 38.81 5.68
577 578 1.082117 GTACGAATCCCAGTGGCGTG 61.082 60.000 19.08 0.54 36.51 5.34
578 579 2.233605 TACGAATCCCAGTGGCGTGG 62.234 60.000 19.08 4.56 36.51 4.94
579 580 2.351276 GAATCCCAGTGGCGTGGT 59.649 61.111 2.61 0.00 35.60 4.16
580 581 1.600107 GAATCCCAGTGGCGTGGTA 59.400 57.895 2.61 0.00 35.60 3.25
581 582 0.180406 GAATCCCAGTGGCGTGGTAT 59.820 55.000 2.61 0.00 35.60 2.73
582 583 0.623723 AATCCCAGTGGCGTGGTATT 59.376 50.000 2.61 0.00 35.60 1.89
583 584 0.623723 ATCCCAGTGGCGTGGTATTT 59.376 50.000 2.61 0.00 35.60 1.40
584 585 0.402504 TCCCAGTGGCGTGGTATTTT 59.597 50.000 2.61 0.00 35.60 1.82
585 586 1.202952 TCCCAGTGGCGTGGTATTTTT 60.203 47.619 2.61 0.00 35.60 1.94
586 587 1.067915 CCCAGTGGCGTGGTATTTTTG 60.068 52.381 2.61 0.00 35.60 2.44
587 588 1.067915 CCAGTGGCGTGGTATTTTTGG 60.068 52.381 0.00 0.00 32.32 3.28
588 589 0.601057 AGTGGCGTGGTATTTTTGGC 59.399 50.000 0.00 0.00 0.00 4.52
589 590 0.731174 GTGGCGTGGTATTTTTGGCG 60.731 55.000 0.00 0.00 0.00 5.69
590 591 1.153920 GGCGTGGTATTTTTGGCGG 60.154 57.895 0.00 0.00 0.00 6.13
591 592 1.582461 GCGTGGTATTTTTGGCGGT 59.418 52.632 0.00 0.00 0.00 5.68
592 593 0.455464 GCGTGGTATTTTTGGCGGTC 60.455 55.000 0.00 0.00 0.00 4.79
593 594 1.161843 CGTGGTATTTTTGGCGGTCT 58.838 50.000 0.00 0.00 0.00 3.85
594 595 1.538075 CGTGGTATTTTTGGCGGTCTT 59.462 47.619 0.00 0.00 0.00 3.01
595 596 2.030628 CGTGGTATTTTTGGCGGTCTTT 60.031 45.455 0.00 0.00 0.00 2.52
596 597 3.551250 CGTGGTATTTTTGGCGGTCTTTT 60.551 43.478 0.00 0.00 0.00 2.27
597 598 4.373527 GTGGTATTTTTGGCGGTCTTTTT 58.626 39.130 0.00 0.00 0.00 1.94
696 697 2.325857 GCTGAAGGCGCGCAATAG 59.674 61.111 34.42 23.82 0.00 1.73
697 698 3.017323 CTGAAGGCGCGCAATAGG 58.983 61.111 34.42 15.48 0.00 2.57
698 699 1.521457 CTGAAGGCGCGCAATAGGA 60.521 57.895 34.42 10.00 0.00 2.94
699 700 1.078778 TGAAGGCGCGCAATAGGAA 60.079 52.632 34.42 8.23 0.00 3.36
700 701 1.089481 TGAAGGCGCGCAATAGGAAG 61.089 55.000 34.42 0.00 0.00 3.46
701 702 2.380304 GAAGGCGCGCAATAGGAAGC 62.380 60.000 34.42 12.03 0.00 3.86
702 703 2.876368 AAGGCGCGCAATAGGAAGCT 62.876 55.000 34.42 14.40 0.00 3.74
703 704 2.628657 GCGCGCAATAGGAAGCTC 59.371 61.111 29.10 0.00 0.00 4.09
704 705 2.886782 GCGCGCAATAGGAAGCTCC 61.887 63.158 29.10 0.00 36.58 4.70
732 733 1.282382 TGGCCCAACTACTCTAACCC 58.718 55.000 0.00 0.00 0.00 4.11
794 796 2.754658 TCTCCGCCTCCGTTCCTC 60.755 66.667 0.00 0.00 0.00 3.71
795 797 4.194720 CTCCGCCTCCGTTCCTCG 62.195 72.222 0.00 0.00 39.52 4.63
808 810 1.816863 TTCCTCGGCTTCTCGTGCTT 61.817 55.000 0.00 0.00 0.00 3.91
862 864 1.803519 CGCTGAGAGCAGTTCGTCC 60.804 63.158 0.00 0.00 42.58 4.79
962 964 2.829003 CTCCGCTACCGCCTCTCA 60.829 66.667 0.00 0.00 0.00 3.27
1279 1337 1.762957 CGGGTGGATGGATGTAGAACT 59.237 52.381 0.00 0.00 0.00 3.01
1283 1341 5.245301 CGGGTGGATGGATGTAGAACTATAA 59.755 44.000 0.00 0.00 0.00 0.98
1338 1416 2.549754 CCTGAACCAGTAGCAGTTTGTG 59.450 50.000 0.00 0.00 0.00 3.33
1400 1478 6.775142 TCCCTGAGTCAATCAAAATGTTAACA 59.225 34.615 11.41 11.41 37.52 2.41
1539 1630 3.035942 CGCTTCTTGTACTGTTGTTTGC 58.964 45.455 0.00 0.00 0.00 3.68
1640 1736 5.510671 CATGTGTGACTGAACCTTGTAAAC 58.489 41.667 0.00 0.00 0.00 2.01
1753 1849 8.749026 ACTCTAATAAGATCTCTAAACGGACA 57.251 34.615 0.00 0.00 0.00 4.02
1754 1850 9.357161 ACTCTAATAAGATCTCTAAACGGACAT 57.643 33.333 0.00 0.00 0.00 3.06
1805 1908 9.744468 AAAAGTAAACAGCAATATTCGTCTTTT 57.256 25.926 0.00 0.00 0.00 2.27
1809 1912 9.690434 GTAAACAGCAATATTCGTCTTTTCTAG 57.310 33.333 0.00 0.00 0.00 2.43
1873 1977 0.466739 CATGCTTGATAGGCTGGCCA 60.467 55.000 14.39 4.71 38.92 5.36
1876 1980 0.394899 GCTTGATAGGCTGGCCAACT 60.395 55.000 7.01 11.10 38.92 3.16
2061 2166 5.048921 ACGAAAAGATGACGTAAGACAGAGA 60.049 40.000 0.00 0.00 46.68 3.10
2063 2168 7.148289 ACGAAAAGATGACGTAAGACAGAGATA 60.148 37.037 0.00 0.00 46.68 1.98
2222 2331 9.468532 GGAATATTCCAGTCATTAAAAGAATGC 57.531 33.333 26.61 0.00 46.76 3.56
2238 2383 1.890876 ATGCAACACGTGGCTTCTTA 58.109 45.000 21.57 0.00 0.00 2.10
2249 2394 3.084786 GTGGCTTCTTATTCCTGCTTGT 58.915 45.455 0.00 0.00 0.00 3.16
2306 2453 7.335627 TGGAATATACCAAGTGTAAGTTCCAG 58.664 38.462 13.35 0.00 44.08 3.86
2313 2460 2.972348 AGTGTAAGTTCCAGTGGGAGA 58.028 47.619 9.92 0.00 46.01 3.71
2795 3312 6.719365 GCCAGAGCAATGTAATAACTTACTG 58.281 40.000 0.00 0.00 37.56 2.74
2942 3472 5.222171 TGGTTACTAAGTGGGGCTAAATTGT 60.222 40.000 0.00 0.00 0.00 2.71
2989 3521 0.827089 CAGTTTGTGGTGATGGCCCA 60.827 55.000 0.00 0.00 0.00 5.36
3080 3617 4.192429 AGCCATGCCATTTTAACTCAAC 57.808 40.909 0.00 0.00 0.00 3.18
3177 3785 4.383649 GCTTTGTTGTATGCACATGAACAG 59.616 41.667 0.00 0.00 33.76 3.16
3191 3807 3.909776 TGAACAGTGGTAGTCAGTACG 57.090 47.619 0.00 0.00 31.59 3.67
3308 3925 1.739562 GACGAGCTGGACTTGCAGG 60.740 63.158 1.44 0.00 32.28 4.85
3321 3938 2.026262 ACTTGCAGGGTCCGTTTATGAT 60.026 45.455 0.00 0.00 0.00 2.45
3345 3964 5.400066 TCTGCTAACATGTTAGTGTGCTA 57.600 39.130 34.74 18.52 43.28 3.49
3346 3965 5.977635 TCTGCTAACATGTTAGTGTGCTAT 58.022 37.500 34.74 6.09 43.28 2.97
3417 4070 6.401394 TCTGCACAAGCTATGGATATGTATC 58.599 40.000 0.00 0.00 42.74 2.24
3509 4164 2.949447 ACAGCCAACAGGACAATTCTT 58.051 42.857 0.00 0.00 0.00 2.52
3587 4247 4.006319 GCCTTCTGTTGAATAGTTCTGCT 58.994 43.478 0.00 0.00 0.00 4.24
3590 4250 5.702670 CCTTCTGTTGAATAGTTCTGCTCAA 59.297 40.000 0.00 0.00 0.00 3.02
3677 4337 2.732412 TCTTCTCTGAAGAACAGCCG 57.268 50.000 7.46 0.00 45.38 5.52
3722 4382 5.324784 AGAATTTTCCGGGCTTCATTAAC 57.675 39.130 0.00 0.00 0.00 2.01
3763 4423 6.715347 ATTAGTTGAATTGGATGGTAAGGC 57.285 37.500 0.00 0.00 0.00 4.35
3824 4484 6.820656 AGAGCAGTTCATCAATAAACAGGTAG 59.179 38.462 0.00 0.00 0.00 3.18
3843 4575 5.869888 AGGTAGTTCTGTTTATCTTCTTGCG 59.130 40.000 0.00 0.00 0.00 4.85
3848 4580 5.845985 TCTGTTTATCTTCTTGCGAACAG 57.154 39.130 7.51 7.51 43.09 3.16
3863 4596 9.464714 TCTTGCGAACAGAAAATCTAGTATATC 57.535 33.333 0.00 0.00 0.00 1.63
3992 4725 7.238710 TCCTCCTTTGCCTAGAATTTTACTTT 58.761 34.615 0.00 0.00 0.00 2.66
4119 4875 1.492176 CCTGCTGGGTATGAGAACCAT 59.508 52.381 0.71 0.00 41.67 3.55
4123 4879 3.973305 TGCTGGGTATGAGAACCATCATA 59.027 43.478 0.00 0.00 41.67 2.15
4124 4880 4.040829 TGCTGGGTATGAGAACCATCATAG 59.959 45.833 0.00 0.00 41.61 2.23
4126 4882 4.826616 TGGGTATGAGAACCATCATAGGA 58.173 43.478 0.00 0.00 41.61 2.94
4127 4883 5.415065 TGGGTATGAGAACCATCATAGGAT 58.585 41.667 0.00 0.00 41.61 3.24
4128 4884 6.570680 TGGGTATGAGAACCATCATAGGATA 58.429 40.000 0.00 0.00 41.61 2.59
4129 4885 7.199048 TGGGTATGAGAACCATCATAGGATAT 58.801 38.462 0.00 0.00 41.61 1.63
4130 4886 7.345653 TGGGTATGAGAACCATCATAGGATATC 59.654 40.741 0.00 0.00 41.61 1.63
4131 4887 7.566879 GGGTATGAGAACCATCATAGGATATCT 59.433 40.741 2.05 0.00 41.61 1.98
4132 4888 8.986991 GGTATGAGAACCATCATAGGATATCTT 58.013 37.037 2.05 0.00 41.61 2.40
4133 4889 9.814899 GTATGAGAACCATCATAGGATATCTTG 57.185 37.037 2.05 0.00 41.61 3.02
4134 4890 7.250032 TGAGAACCATCATAGGATATCTTGG 57.750 40.000 2.05 3.81 30.87 3.61
4135 4891 6.789457 TGAGAACCATCATAGGATATCTTGGT 59.211 38.462 2.05 4.37 30.87 3.67
4136 4892 7.038729 TGAGAACCATCATAGGATATCTTGGTC 60.039 40.741 2.05 0.00 30.87 4.02
4137 4893 6.214412 AGAACCATCATAGGATATCTTGGTCC 59.786 42.308 2.05 0.00 34.64 4.46
4138 4894 5.415065 ACCATCATAGGATATCTTGGTCCA 58.585 41.667 2.05 0.00 36.96 4.02
4139 4895 5.486775 ACCATCATAGGATATCTTGGTCCAG 59.513 44.000 2.05 0.00 36.96 3.86
4140 4896 5.486775 CCATCATAGGATATCTTGGTCCAGT 59.513 44.000 2.05 0.00 36.96 4.00
4141 4897 6.669591 CCATCATAGGATATCTTGGTCCAGTA 59.330 42.308 2.05 0.00 36.96 2.74
4142 4898 7.346698 CCATCATAGGATATCTTGGTCCAGTAT 59.653 40.741 2.05 0.00 36.96 2.12
4143 4899 7.962995 TCATAGGATATCTTGGTCCAGTATC 57.037 40.000 2.05 10.39 36.96 2.24
4144 4900 6.897966 TCATAGGATATCTTGGTCCAGTATCC 59.102 42.308 21.38 21.38 40.58 2.59
4145 4901 5.093236 AGGATATCTTGGTCCAGTATCCA 57.907 43.478 26.13 1.88 41.98 3.41
4146 4902 5.090139 AGGATATCTTGGTCCAGTATCCAG 58.910 45.833 26.13 9.99 41.98 3.86
4147 4903 4.323104 GGATATCTTGGTCCAGTATCCAGC 60.323 50.000 22.74 7.19 40.20 4.85
4148 4904 2.254152 TCTTGGTCCAGTATCCAGCT 57.746 50.000 0.00 0.00 35.05 4.24
4149 4905 3.398318 TCTTGGTCCAGTATCCAGCTA 57.602 47.619 0.00 0.00 35.05 3.32
4150 4906 3.031736 TCTTGGTCCAGTATCCAGCTAC 58.968 50.000 0.00 0.00 35.05 3.58
4151 4907 2.543037 TGGTCCAGTATCCAGCTACA 57.457 50.000 0.00 0.00 0.00 2.74
4152 4908 2.827755 TGGTCCAGTATCCAGCTACAA 58.172 47.619 0.00 0.00 0.00 2.41
4153 4909 2.500098 TGGTCCAGTATCCAGCTACAAC 59.500 50.000 0.00 0.00 0.00 3.32
4154 4910 2.500098 GGTCCAGTATCCAGCTACAACA 59.500 50.000 0.00 0.00 0.00 3.33
4155 4911 3.430929 GGTCCAGTATCCAGCTACAACAG 60.431 52.174 0.00 0.00 0.00 3.16
4156 4912 3.447586 GTCCAGTATCCAGCTACAACAGA 59.552 47.826 0.00 0.00 0.00 3.41
4157 4913 4.081642 GTCCAGTATCCAGCTACAACAGAA 60.082 45.833 0.00 0.00 0.00 3.02
4158 4914 4.530553 TCCAGTATCCAGCTACAACAGAAA 59.469 41.667 0.00 0.00 0.00 2.52
4159 4915 5.012664 TCCAGTATCCAGCTACAACAGAAAA 59.987 40.000 0.00 0.00 0.00 2.29
4160 4916 5.352569 CCAGTATCCAGCTACAACAGAAAAG 59.647 44.000 0.00 0.00 0.00 2.27
4161 4917 4.938226 AGTATCCAGCTACAACAGAAAAGC 59.062 41.667 0.00 0.00 35.16 3.51
4162 4918 3.492102 TCCAGCTACAACAGAAAAGCT 57.508 42.857 0.00 0.00 45.94 3.74
4163 4919 3.820557 TCCAGCTACAACAGAAAAGCTT 58.179 40.909 0.00 0.00 42.52 3.74
4164 4920 4.207165 TCCAGCTACAACAGAAAAGCTTT 58.793 39.130 5.69 5.69 42.52 3.51
4165 4921 4.036734 TCCAGCTACAACAGAAAAGCTTTG 59.963 41.667 13.54 3.49 42.52 2.77
4166 4922 4.036734 CCAGCTACAACAGAAAAGCTTTGA 59.963 41.667 13.54 0.00 42.52 2.69
4167 4923 5.450412 CCAGCTACAACAGAAAAGCTTTGAA 60.450 40.000 13.54 0.00 42.52 2.69
4168 4924 6.035843 CAGCTACAACAGAAAAGCTTTGAAA 58.964 36.000 13.54 0.00 42.52 2.69
4169 4925 6.698766 CAGCTACAACAGAAAAGCTTTGAAAT 59.301 34.615 13.54 0.00 42.52 2.17
4170 4926 7.862372 CAGCTACAACAGAAAAGCTTTGAAATA 59.138 33.333 13.54 0.00 42.52 1.40
4171 4927 7.862873 AGCTACAACAGAAAAGCTTTGAAATAC 59.137 33.333 13.54 1.10 42.52 1.89
4172 4928 7.862873 GCTACAACAGAAAAGCTTTGAAATACT 59.137 33.333 13.54 3.34 32.18 2.12
4173 4929 9.736023 CTACAACAGAAAAGCTTTGAAATACTT 57.264 29.630 13.54 0.00 0.00 2.24
4175 4931 9.435688 ACAACAGAAAAGCTTTGAAATACTTTT 57.564 25.926 13.54 14.70 43.15 2.27
4198 4954 5.687166 TTTGTGTATGTAGGGTTCTAGGG 57.313 43.478 0.00 0.00 0.00 3.53
4199 4955 4.613265 TGTGTATGTAGGGTTCTAGGGA 57.387 45.455 0.00 0.00 0.00 4.20
4200 4956 4.950361 TGTGTATGTAGGGTTCTAGGGAA 58.050 43.478 0.00 0.00 0.00 3.97
4201 4957 5.535029 TGTGTATGTAGGGTTCTAGGGAAT 58.465 41.667 0.00 0.00 33.71 3.01
4202 4958 5.968167 TGTGTATGTAGGGTTCTAGGGAATT 59.032 40.000 0.00 0.00 33.71 2.17
4203 4959 7.134162 TGTGTATGTAGGGTTCTAGGGAATTA 58.866 38.462 0.00 0.00 33.71 1.40
4204 4960 7.289317 TGTGTATGTAGGGTTCTAGGGAATTAG 59.711 40.741 0.00 0.00 33.71 1.73
4205 4961 7.508296 GTGTATGTAGGGTTCTAGGGAATTAGA 59.492 40.741 0.00 0.00 33.71 2.10
4206 4962 8.239478 TGTATGTAGGGTTCTAGGGAATTAGAT 58.761 37.037 0.00 0.00 33.71 1.98
4207 4963 6.996180 TGTAGGGTTCTAGGGAATTAGATG 57.004 41.667 0.00 0.00 33.71 2.90
4208 4964 6.689561 TGTAGGGTTCTAGGGAATTAGATGA 58.310 40.000 0.00 0.00 33.71 2.92
4209 4965 6.782988 TGTAGGGTTCTAGGGAATTAGATGAG 59.217 42.308 0.00 0.00 33.71 2.90
4210 4966 6.044411 AGGGTTCTAGGGAATTAGATGAGA 57.956 41.667 0.00 0.00 33.71 3.27
4211 4967 6.453476 AGGGTTCTAGGGAATTAGATGAGAA 58.547 40.000 0.00 0.00 33.71 2.87
4212 4968 6.327887 AGGGTTCTAGGGAATTAGATGAGAAC 59.672 42.308 0.00 0.00 40.23 3.01
4214 4970 7.368198 GTTCTAGGGAATTAGATGAGAACCT 57.632 40.000 0.00 0.00 36.77 3.50
4215 4971 6.985653 TCTAGGGAATTAGATGAGAACCTG 57.014 41.667 0.00 0.00 0.00 4.00
4216 4972 4.429854 AGGGAATTAGATGAGAACCTGC 57.570 45.455 0.00 0.00 0.00 4.85
4217 4973 4.043596 AGGGAATTAGATGAGAACCTGCT 58.956 43.478 0.00 0.00 0.00 4.24
4218 4974 4.133078 GGGAATTAGATGAGAACCTGCTG 58.867 47.826 0.00 0.00 0.00 4.41
4219 4975 4.133078 GGAATTAGATGAGAACCTGCTGG 58.867 47.826 8.29 8.29 39.83 4.85
4220 4976 3.853355 ATTAGATGAGAACCTGCTGGG 57.147 47.619 14.82 4.64 41.89 4.45
4237 4993 2.827755 TGGGTATCCAGCTACAACAGA 58.172 47.619 0.00 0.00 38.32 3.41
4238 4994 3.178046 TGGGTATCCAGCTACAACAGAA 58.822 45.455 0.00 0.00 38.32 3.02
4239 4995 3.585289 TGGGTATCCAGCTACAACAGAAA 59.415 43.478 0.00 0.00 38.32 2.52
4240 4996 4.042311 TGGGTATCCAGCTACAACAGAAAA 59.958 41.667 0.00 0.00 38.32 2.29
4241 4997 4.395231 GGGTATCCAGCTACAACAGAAAAC 59.605 45.833 0.00 0.00 0.00 2.43
4242 4998 4.395231 GGTATCCAGCTACAACAGAAAACC 59.605 45.833 0.00 0.00 0.00 3.27
4243 4999 2.858745 TCCAGCTACAACAGAAAACCC 58.141 47.619 0.00 0.00 0.00 4.11
4244 5000 2.173782 TCCAGCTACAACAGAAAACCCA 59.826 45.455 0.00 0.00 0.00 4.51
4245 5001 2.955660 CCAGCTACAACAGAAAACCCAA 59.044 45.455 0.00 0.00 0.00 4.12
4246 5002 3.573967 CCAGCTACAACAGAAAACCCAAT 59.426 43.478 0.00 0.00 0.00 3.16
4247 5003 4.039124 CCAGCTACAACAGAAAACCCAATT 59.961 41.667 0.00 0.00 0.00 2.32
4248 5004 5.453198 CCAGCTACAACAGAAAACCCAATTT 60.453 40.000 0.00 0.00 0.00 1.82
4249 5005 5.691754 CAGCTACAACAGAAAACCCAATTTC 59.308 40.000 0.00 0.00 39.16 2.17
4251 5007 6.775629 AGCTACAACAGAAAACCCAATTTCTA 59.224 34.615 2.29 0.00 45.45 2.10
4252 5008 7.040409 AGCTACAACAGAAAACCCAATTTCTAG 60.040 37.037 2.29 0.00 45.45 2.43
4253 5009 7.040686 GCTACAACAGAAAACCCAATTTCTAGA 60.041 37.037 2.29 0.00 45.45 2.43
4254 5010 7.654022 ACAACAGAAAACCCAATTTCTAGAA 57.346 32.000 0.00 0.00 45.45 2.10
4255 5011 7.489160 ACAACAGAAAACCCAATTTCTAGAAC 58.511 34.615 4.18 0.00 45.45 3.01
4256 5012 6.650427 ACAGAAAACCCAATTTCTAGAACC 57.350 37.500 4.18 0.00 45.45 3.62
4257 5013 5.538813 ACAGAAAACCCAATTTCTAGAACCC 59.461 40.000 4.18 0.00 45.45 4.11
4258 5014 5.775195 CAGAAAACCCAATTTCTAGAACCCT 59.225 40.000 4.18 0.00 45.45 4.34
4259 5015 6.946009 CAGAAAACCCAATTTCTAGAACCCTA 59.054 38.462 4.18 0.00 45.45 3.53
4260 5016 6.946583 AGAAAACCCAATTTCTAGAACCCTAC 59.053 38.462 4.18 0.00 45.39 3.18
4297 5055 8.740123 TTCTTTTGTGTGTCACTCCTTTATTA 57.260 30.769 4.27 0.00 35.11 0.98
4298 5056 8.149973 TCTTTTGTGTGTCACTCCTTTATTAC 57.850 34.615 4.27 0.00 35.11 1.89
4409 5551 7.984050 GGATATCATGACAGAAAAGAGAAGACA 59.016 37.037 4.83 0.00 0.00 3.41
4413 5555 5.344743 TGACAGAAAAGAGAAGACACAGT 57.655 39.130 0.00 0.00 0.00 3.55
4530 8016 5.780282 TCCATACCTTCGGTCTTGATATCAT 59.220 40.000 6.17 0.00 37.09 2.45
4549 8036 4.885413 TCATCTGGCCTTGTTCAATTTTG 58.115 39.130 3.32 0.00 0.00 2.44
4561 8048 4.687018 TGTTCAATTTTGATGAGCATGCAC 59.313 37.500 21.98 15.08 37.00 4.57
4640 8127 9.375974 AGTACTACAGCCTATTGATATGGTTAA 57.624 33.333 0.00 0.00 0.00 2.01
4705 8193 8.293867 TGTTGGAAGTAAACAAAAGAATATCCG 58.706 33.333 0.00 0.00 34.68 4.18
5157 8655 7.782049 TGTGAGTTTATAGATTCCGACATTCT 58.218 34.615 0.00 0.00 0.00 2.40
5158 8656 7.921214 TGTGAGTTTATAGATTCCGACATTCTC 59.079 37.037 0.00 0.00 0.00 2.87
5159 8657 7.113684 GTGAGTTTATAGATTCCGACATTCTCG 59.886 40.741 0.00 0.00 42.54 4.04
5160 8658 7.012989 TGAGTTTATAGATTCCGACATTCTCGA 59.987 37.037 0.00 0.00 46.14 4.04
5161 8659 7.713750 AGTTTATAGATTCCGACATTCTCGAA 58.286 34.615 0.00 0.00 46.14 3.71
5162 8660 8.361139 AGTTTATAGATTCCGACATTCTCGAAT 58.639 33.333 0.00 0.00 46.14 3.34
5163 8661 8.979574 GTTTATAGATTCCGACATTCTCGAATT 58.020 33.333 0.00 0.00 46.14 2.17
5164 8662 9.542462 TTTATAGATTCCGACATTCTCGAATTT 57.458 29.630 0.00 0.00 46.14 1.82
5165 8663 5.975410 AGATTCCGACATTCTCGAATTTC 57.025 39.130 0.00 0.00 46.14 2.17
5315 8814 5.123344 CCAAGGAAAGTTTACGGATTTCGAT 59.877 40.000 0.00 0.00 42.43 3.59
5324 8823 6.201044 AGTTTACGGATTTCGATGCAGATTAG 59.799 38.462 0.00 0.00 42.43 1.73
5326 8825 4.693283 ACGGATTTCGATGCAGATTAGAA 58.307 39.130 0.00 0.00 42.43 2.10
5349 8972 1.162698 GGGGAGTACCGAAGCAAAAC 58.837 55.000 0.00 0.00 41.60 2.43
5350 8973 1.271217 GGGGAGTACCGAAGCAAAACT 60.271 52.381 0.00 0.00 41.60 2.66
5351 8974 2.074576 GGGAGTACCGAAGCAAAACTC 58.925 52.381 0.00 0.00 36.64 3.01
5352 8975 2.549349 GGGAGTACCGAAGCAAAACTCA 60.549 50.000 0.00 0.00 38.63 3.41
5353 8976 3.335579 GGAGTACCGAAGCAAAACTCAT 58.664 45.455 0.00 0.00 38.63 2.90
5354 8977 4.501071 GGAGTACCGAAGCAAAACTCATA 58.499 43.478 0.00 0.00 38.63 2.15
5355 8978 4.933400 GGAGTACCGAAGCAAAACTCATAA 59.067 41.667 0.00 0.00 38.63 1.90
5356 8979 5.163884 GGAGTACCGAAGCAAAACTCATAAC 60.164 44.000 0.00 0.00 38.63 1.89
5357 8980 3.806316 ACCGAAGCAAAACTCATAACG 57.194 42.857 0.00 0.00 0.00 3.18
5358 8981 3.135994 ACCGAAGCAAAACTCATAACGT 58.864 40.909 0.00 0.00 0.00 3.99
5359 8982 3.185797 ACCGAAGCAAAACTCATAACGTC 59.814 43.478 0.00 0.00 0.00 4.34
5360 8983 3.432252 CCGAAGCAAAACTCATAACGTCT 59.568 43.478 0.00 0.00 0.00 4.18
5367 8990 7.033185 AGCAAAACTCATAACGTCTTTTTGTT 58.967 30.769 13.19 8.01 36.66 2.83
5438 9219 7.475771 TTTTTGAAACATGTGCCTGAATTAC 57.524 32.000 0.00 0.00 0.00 1.89
5505 9295 3.838244 AGTGCACAAACTAGTGAAGGA 57.162 42.857 21.04 0.00 42.05 3.36
5721 9523 1.222113 GGCTTCTACCCTCACAGGC 59.778 63.158 0.00 0.00 32.73 4.85
5743 9547 3.004839 CCTGTCTCCTACCATCATGTACG 59.995 52.174 0.00 0.00 0.00 3.67
5858 9663 9.769093 GTTGGTAATATGTTGTCAACTGAATAC 57.231 33.333 16.45 13.10 33.14 1.89
5966 9793 6.419484 TTCTTTCCTTCAAATCCTTTTCCC 57.581 37.500 0.00 0.00 0.00 3.97
5981 9811 2.002018 TTCCCGCTCCTTTTGGTGGT 62.002 55.000 0.00 0.00 41.38 4.16
6044 9883 0.108945 TGTCATCTCTGCTGCTGTCG 60.109 55.000 0.00 0.00 0.00 4.35
6086 9928 1.302832 CAGGAGTGTTCCACCTGGC 60.303 63.158 0.00 0.00 46.64 4.85
6113 9955 4.562425 GATCCAATCGGCCCGCCA 62.562 66.667 6.52 0.00 35.37 5.69
6156 9998 3.390135 TCTCGCTTTGTGAGGTAAGTTG 58.610 45.455 8.06 0.00 40.20 3.16
6201 10047 1.895131 CCCACTTTATGCTTGGCAACT 59.105 47.619 0.00 0.00 43.62 3.16
6234 10080 7.229506 GCTCAAGATGGCCTATTATTGTACTTT 59.770 37.037 3.32 0.00 0.00 2.66
6370 10300 6.215495 TGTCAATACGTCATGGAAGTCATA 57.785 37.500 0.00 0.00 34.12 2.15
6372 10302 6.127451 TGTCAATACGTCATGGAAGTCATAGT 60.127 38.462 0.00 0.00 34.12 2.12
6374 10304 7.591795 GTCAATACGTCATGGAAGTCATAGTAG 59.408 40.741 0.00 0.00 34.12 2.57
6427 10428 0.747283 CAGCTGATGCCAACCTCCTC 60.747 60.000 8.42 0.00 40.80 3.71
6432 10433 2.426024 CTGATGCCAACCTCCTCATTTG 59.574 50.000 0.00 0.00 0.00 2.32
6562 10575 0.957395 CACCCTGCGCTGAATGACTT 60.957 55.000 16.65 0.00 0.00 3.01
6572 10585 3.180980 CGCTGAATGACTTTGCTTTGTTG 59.819 43.478 0.00 0.00 0.00 3.33
6592 10606 1.959747 CTGTGCGCTCATGAACTTTG 58.040 50.000 13.20 0.00 0.00 2.77
6612 10626 2.703536 TGTTTCAGTAGACCCTGCTTGA 59.296 45.455 0.00 0.00 32.32 3.02
6614 10628 2.310779 TCAGTAGACCCTGCTTGAGT 57.689 50.000 0.00 0.00 32.32 3.41
6636 10653 7.721842 TGAGTAGTTGGGAACATGAATGTAAAA 59.278 33.333 0.00 0.00 40.80 1.52
6637 10654 7.882179 AGTAGTTGGGAACATGAATGTAAAAC 58.118 34.615 0.00 0.60 40.80 2.43
6638 10655 6.976934 AGTTGGGAACATGAATGTAAAACT 57.023 33.333 0.00 2.65 40.80 2.66
6660 10687 8.608844 AACTTTTGTATTCACCTTCTAGACAG 57.391 34.615 0.00 0.00 0.00 3.51
6746 10773 1.145325 CCTATGTACTCCCTCCGTCCT 59.855 57.143 0.00 0.00 0.00 3.85
6825 10858 6.830736 AGTTTCAAAACAATCACAAACAAGC 58.169 32.000 8.23 0.00 41.30 4.01
6828 10861 4.081198 TCAAAACAATCACAAACAAGCCCT 60.081 37.500 0.00 0.00 0.00 5.19
6905 10939 2.126773 CAAGCTGCGCGATTTGCA 60.127 55.556 12.10 0.00 46.97 4.08
6952 11011 1.957186 GCCACGTACCTTCAACGCA 60.957 57.895 0.00 0.00 44.04 5.24
6955 11014 0.944311 CACGTACCTTCAACGCAGCT 60.944 55.000 0.00 0.00 44.04 4.24
7002 11061 2.431942 CCGCGTCGCCAAGTACTT 60.432 61.111 12.44 1.12 0.00 2.24
7003 11062 1.153978 CCGCGTCGCCAAGTACTTA 60.154 57.895 12.44 0.00 0.00 2.24
7004 11063 1.408474 CCGCGTCGCCAAGTACTTAC 61.408 60.000 12.44 1.87 0.00 2.34
7005 11064 0.455633 CGCGTCGCCAAGTACTTACT 60.456 55.000 12.44 0.00 38.39 2.24
7007 11066 1.905449 CGTCGCCAAGTACTTACTCC 58.095 55.000 8.04 0.00 34.99 3.85
7008 11067 1.792993 CGTCGCCAAGTACTTACTCCG 60.793 57.143 8.04 8.63 34.99 4.63
7009 11068 0.171903 TCGCCAAGTACTTACTCCGC 59.828 55.000 8.04 4.52 34.99 5.54
7010 11069 0.804933 CGCCAAGTACTTACTCCGCC 60.805 60.000 8.04 0.00 34.99 6.13
7011 11070 0.248289 GCCAAGTACTTACTCCGCCA 59.752 55.000 8.04 0.00 34.99 5.69
7133 11229 1.379309 GAGTCCTCCTCGTGCTCCT 60.379 63.158 0.00 0.00 0.00 3.69
7135 11231 3.071206 TCCTCCTCGTGCTCCTGC 61.071 66.667 0.00 0.00 40.20 4.85
7249 11381 2.283676 GTCCTCCGTGGTCTCCCA 60.284 66.667 0.00 0.00 38.87 4.37
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.356470 GGCAAGCTTCTCTATTTTCTCATGT 59.644 40.000 0.00 0.00 0.00 3.21
1 2 5.589452 AGGCAAGCTTCTCTATTTTCTCATG 59.411 40.000 0.00 0.00 0.00 3.07
4 5 7.281999 ACATTAGGCAAGCTTCTCTATTTTCTC 59.718 37.037 0.00 0.00 0.00 2.87
5 6 7.115414 ACATTAGGCAAGCTTCTCTATTTTCT 58.885 34.615 0.00 0.00 0.00 2.52
6 7 7.326968 ACATTAGGCAAGCTTCTCTATTTTC 57.673 36.000 0.00 0.00 0.00 2.29
7 8 8.807948 TTACATTAGGCAAGCTTCTCTATTTT 57.192 30.769 0.00 0.00 0.00 1.82
8 9 8.049721 ACTTACATTAGGCAAGCTTCTCTATTT 58.950 33.333 0.00 0.00 0.00 1.40
9 10 7.569240 ACTTACATTAGGCAAGCTTCTCTATT 58.431 34.615 0.00 0.00 0.00 1.73
10 11 7.130681 ACTTACATTAGGCAAGCTTCTCTAT 57.869 36.000 0.00 0.00 0.00 1.98
11 12 6.546428 ACTTACATTAGGCAAGCTTCTCTA 57.454 37.500 0.00 0.00 0.00 2.43
12 13 5.428184 ACTTACATTAGGCAAGCTTCTCT 57.572 39.130 0.00 0.00 0.00 3.10
13 14 7.611213 TTTACTTACATTAGGCAAGCTTCTC 57.389 36.000 0.00 0.00 0.00 2.87
14 15 7.611855 ACATTTACTTACATTAGGCAAGCTTCT 59.388 33.333 0.00 0.00 0.00 2.85
15 16 7.762382 ACATTTACTTACATTAGGCAAGCTTC 58.238 34.615 0.00 0.00 0.00 3.86
16 17 7.703058 ACATTTACTTACATTAGGCAAGCTT 57.297 32.000 0.00 0.00 0.00 3.74
17 18 8.801882 TTACATTTACTTACATTAGGCAAGCT 57.198 30.769 0.00 0.00 0.00 3.74
18 19 9.665264 GATTACATTTACTTACATTAGGCAAGC 57.335 33.333 0.00 0.00 0.00 4.01
56 57 6.357579 TGCACCACTCATTTGGATATTTTT 57.642 33.333 0.00 0.00 39.24 1.94
57 58 5.999205 TGCACCACTCATTTGGATATTTT 57.001 34.783 0.00 0.00 39.24 1.82
58 59 5.622007 CGTTGCACCACTCATTTGGATATTT 60.622 40.000 0.00 0.00 39.24 1.40
59 60 4.142403 CGTTGCACCACTCATTTGGATATT 60.142 41.667 0.00 0.00 39.24 1.28
60 61 3.378112 CGTTGCACCACTCATTTGGATAT 59.622 43.478 0.00 0.00 39.24 1.63
61 62 2.746904 CGTTGCACCACTCATTTGGATA 59.253 45.455 0.00 0.00 39.24 2.59
62 63 1.541147 CGTTGCACCACTCATTTGGAT 59.459 47.619 0.00 0.00 39.24 3.41
63 64 0.950836 CGTTGCACCACTCATTTGGA 59.049 50.000 0.00 0.00 39.24 3.53
64 65 0.664166 GCGTTGCACCACTCATTTGG 60.664 55.000 0.00 0.00 43.04 3.28
65 66 0.030504 TGCGTTGCACCACTCATTTG 59.969 50.000 0.00 0.00 31.71 2.32
66 67 0.743688 TTGCGTTGCACCACTCATTT 59.256 45.000 0.00 0.00 38.71 2.32
67 68 0.311790 CTTGCGTTGCACCACTCATT 59.688 50.000 0.00 0.00 38.71 2.57
68 69 0.534877 TCTTGCGTTGCACCACTCAT 60.535 50.000 0.00 0.00 38.71 2.90
69 70 1.153269 TCTTGCGTTGCACCACTCA 60.153 52.632 0.00 0.00 38.71 3.41
70 71 1.279840 GTCTTGCGTTGCACCACTC 59.720 57.895 0.00 0.00 38.71 3.51
71 72 1.451207 TGTCTTGCGTTGCACCACT 60.451 52.632 0.00 0.00 38.71 4.00
72 73 1.298339 GTGTCTTGCGTTGCACCAC 60.298 57.895 0.00 0.00 38.71 4.16
73 74 3.106552 GTGTCTTGCGTTGCACCA 58.893 55.556 0.00 0.00 38.71 4.17
74 75 2.331451 GGTGTCTTGCGTTGCACC 59.669 61.111 4.91 4.91 43.52 5.01
75 76 0.941542 TAAGGTGTCTTGCGTTGCAC 59.058 50.000 0.00 0.00 38.71 4.57
76 77 1.890876 ATAAGGTGTCTTGCGTTGCA 58.109 45.000 0.00 0.00 36.47 4.08
77 78 4.616181 AATATAAGGTGTCTTGCGTTGC 57.384 40.909 0.00 0.00 34.59 4.17
78 79 7.970384 TCTAAAATATAAGGTGTCTTGCGTTG 58.030 34.615 0.00 0.00 34.59 4.10
79 80 8.732746 ATCTAAAATATAAGGTGTCTTGCGTT 57.267 30.769 0.00 0.00 34.59 4.84
80 81 8.732746 AATCTAAAATATAAGGTGTCTTGCGT 57.267 30.769 0.00 0.00 34.59 5.24
122 123 8.368668 CCCTTCGTTCTTTGATATAAGGAGTAT 58.631 37.037 0.00 0.00 35.14 2.12
123 124 7.562454 TCCCTTCGTTCTTTGATATAAGGAGTA 59.438 37.037 0.00 0.00 35.14 2.59
124 125 6.383147 TCCCTTCGTTCTTTGATATAAGGAGT 59.617 38.462 0.00 0.00 35.14 3.85
125 126 6.817184 TCCCTTCGTTCTTTGATATAAGGAG 58.183 40.000 0.00 0.00 35.14 3.69
126 127 6.383147 ACTCCCTTCGTTCTTTGATATAAGGA 59.617 38.462 0.00 0.00 35.14 3.36
127 128 6.583562 ACTCCCTTCGTTCTTTGATATAAGG 58.416 40.000 0.00 0.00 33.37 2.69
128 129 9.197694 CATACTCCCTTCGTTCTTTGATATAAG 57.802 37.037 0.00 0.00 0.00 1.73
129 130 8.701895 ACATACTCCCTTCGTTCTTTGATATAA 58.298 33.333 0.00 0.00 0.00 0.98
130 131 8.141909 CACATACTCCCTTCGTTCTTTGATATA 58.858 37.037 0.00 0.00 0.00 0.86
131 132 6.986817 CACATACTCCCTTCGTTCTTTGATAT 59.013 38.462 0.00 0.00 0.00 1.63
132 133 6.338146 CACATACTCCCTTCGTTCTTTGATA 58.662 40.000 0.00 0.00 0.00 2.15
133 134 5.178797 CACATACTCCCTTCGTTCTTTGAT 58.821 41.667 0.00 0.00 0.00 2.57
134 135 4.562757 CCACATACTCCCTTCGTTCTTTGA 60.563 45.833 0.00 0.00 0.00 2.69
135 136 3.684788 CCACATACTCCCTTCGTTCTTTG 59.315 47.826 0.00 0.00 0.00 2.77
136 137 3.326880 ACCACATACTCCCTTCGTTCTTT 59.673 43.478 0.00 0.00 0.00 2.52
137 138 2.904434 ACCACATACTCCCTTCGTTCTT 59.096 45.455 0.00 0.00 0.00 2.52
138 139 2.537143 ACCACATACTCCCTTCGTTCT 58.463 47.619 0.00 0.00 0.00 3.01
139 140 4.098960 TGATACCACATACTCCCTTCGTTC 59.901 45.833 0.00 0.00 0.00 3.95
140 141 4.028131 TGATACCACATACTCCCTTCGTT 58.972 43.478 0.00 0.00 0.00 3.85
141 142 3.638860 TGATACCACATACTCCCTTCGT 58.361 45.455 0.00 0.00 0.00 3.85
142 143 4.560128 CATGATACCACATACTCCCTTCG 58.440 47.826 0.00 0.00 0.00 3.79
143 144 4.202357 TGCATGATACCACATACTCCCTTC 60.202 45.833 0.00 0.00 0.00 3.46
144 145 3.716353 TGCATGATACCACATACTCCCTT 59.284 43.478 0.00 0.00 0.00 3.95
145 146 3.317406 TGCATGATACCACATACTCCCT 58.683 45.455 0.00 0.00 0.00 4.20
146 147 3.769739 TGCATGATACCACATACTCCC 57.230 47.619 0.00 0.00 0.00 4.30
147 148 4.752101 GTCTTGCATGATACCACATACTCC 59.248 45.833 5.49 0.00 0.00 3.85
148 149 5.359756 TGTCTTGCATGATACCACATACTC 58.640 41.667 5.49 0.00 0.00 2.59
149 150 5.357742 TGTCTTGCATGATACCACATACT 57.642 39.130 5.49 0.00 0.00 2.12
150 151 5.759763 TGATGTCTTGCATGATACCACATAC 59.240 40.000 5.49 1.44 38.06 2.39
151 152 5.927819 TGATGTCTTGCATGATACCACATA 58.072 37.500 5.49 0.00 38.06 2.29
152 153 4.784177 TGATGTCTTGCATGATACCACAT 58.216 39.130 5.49 4.76 38.06 3.21
153 154 4.219264 TGATGTCTTGCATGATACCACA 57.781 40.909 5.49 0.00 38.06 4.17
154 155 5.762825 AATGATGTCTTGCATGATACCAC 57.237 39.130 5.49 0.49 38.06 4.16
155 156 8.467963 AATAAATGATGTCTTGCATGATACCA 57.532 30.769 5.49 0.37 38.06 3.25
161 162 9.961265 ACATCTTAATAAATGATGTCTTGCATG 57.039 29.630 0.00 0.00 44.97 4.06
179 180 9.996554 TCAAGACAAAATGAGTCTACATCTTAA 57.003 29.630 0.00 0.00 45.11 1.85
180 181 9.645059 CTCAAGACAAAATGAGTCTACATCTTA 57.355 33.333 0.00 0.00 45.11 2.10
181 182 8.370940 TCTCAAGACAAAATGAGTCTACATCTT 58.629 33.333 0.00 0.00 45.11 2.40
182 183 7.901029 TCTCAAGACAAAATGAGTCTACATCT 58.099 34.615 0.00 0.00 45.11 2.90
183 184 8.602328 CATCTCAAGACAAAATGAGTCTACATC 58.398 37.037 0.00 0.00 45.11 3.06
184 185 7.065563 GCATCTCAAGACAAAATGAGTCTACAT 59.934 37.037 0.00 0.00 45.11 2.29
185 186 6.369890 GCATCTCAAGACAAAATGAGTCTACA 59.630 38.462 0.00 0.00 45.11 2.74
186 187 6.454848 CGCATCTCAAGACAAAATGAGTCTAC 60.455 42.308 0.00 0.00 45.11 2.59
187 188 5.578336 CGCATCTCAAGACAAAATGAGTCTA 59.422 40.000 0.00 0.00 45.11 2.59
189 190 4.153117 ACGCATCTCAAGACAAAATGAGTC 59.847 41.667 3.03 0.00 42.86 3.36
190 191 4.067896 ACGCATCTCAAGACAAAATGAGT 58.932 39.130 3.03 0.00 42.86 3.41
191 192 4.675190 ACGCATCTCAAGACAAAATGAG 57.325 40.909 0.00 0.00 43.51 2.90
192 193 6.741992 ATAACGCATCTCAAGACAAAATGA 57.258 33.333 0.00 0.00 0.00 2.57
193 194 7.801547 AAATAACGCATCTCAAGACAAAATG 57.198 32.000 0.00 0.00 0.00 2.32
194 195 9.341899 GTAAAATAACGCATCTCAAGACAAAAT 57.658 29.630 0.00 0.00 0.00 1.82
195 196 7.532546 CGTAAAATAACGCATCTCAAGACAAAA 59.467 33.333 0.00 0.00 35.87 2.44
196 197 7.012943 CGTAAAATAACGCATCTCAAGACAAA 58.987 34.615 0.00 0.00 35.87 2.83
197 198 6.401688 CCGTAAAATAACGCATCTCAAGACAA 60.402 38.462 0.00 0.00 41.51 3.18
198 199 5.062934 CCGTAAAATAACGCATCTCAAGACA 59.937 40.000 0.00 0.00 41.51 3.41
199 200 5.063060 ACCGTAAAATAACGCATCTCAAGAC 59.937 40.000 0.00 0.00 41.51 3.01
200 201 5.172934 ACCGTAAAATAACGCATCTCAAGA 58.827 37.500 0.00 0.00 41.51 3.02
201 202 5.464965 ACCGTAAAATAACGCATCTCAAG 57.535 39.130 0.00 0.00 41.51 3.02
202 203 6.368243 TGTTACCGTAAAATAACGCATCTCAA 59.632 34.615 0.00 0.00 41.51 3.02
203 204 5.868258 TGTTACCGTAAAATAACGCATCTCA 59.132 36.000 0.00 0.00 41.51 3.27
204 205 6.180567 GTGTTACCGTAAAATAACGCATCTC 58.819 40.000 0.00 0.00 40.13 2.75
205 206 5.638657 TGTGTTACCGTAAAATAACGCATCT 59.361 36.000 6.34 0.00 43.37 2.90
206 207 5.856314 TGTGTTACCGTAAAATAACGCATC 58.144 37.500 6.34 0.00 43.37 3.91
207 208 5.859521 TGTGTTACCGTAAAATAACGCAT 57.140 34.783 6.34 0.00 43.37 4.73
209 210 7.904461 ACATAATGTGTTACCGTAAAATAACGC 59.096 33.333 0.00 0.00 38.59 4.84
225 226 6.303839 AGGTGTTTGGAGTAACATAATGTGT 58.696 36.000 0.00 0.00 44.84 3.72
226 227 6.655003 AGAGGTGTTTGGAGTAACATAATGTG 59.345 38.462 0.00 0.00 39.93 3.21
227 228 6.779860 AGAGGTGTTTGGAGTAACATAATGT 58.220 36.000 0.00 0.00 39.93 2.71
228 229 7.106239 AGAGAGGTGTTTGGAGTAACATAATG 58.894 38.462 0.00 0.00 39.93 1.90
229 230 7.259088 AGAGAGGTGTTTGGAGTAACATAAT 57.741 36.000 0.00 0.00 39.93 1.28
230 231 6.295688 GGAGAGAGGTGTTTGGAGTAACATAA 60.296 42.308 0.00 0.00 39.93 1.90
231 232 5.187186 GGAGAGAGGTGTTTGGAGTAACATA 59.813 44.000 0.00 0.00 39.93 2.29
232 233 4.020128 GGAGAGAGGTGTTTGGAGTAACAT 60.020 45.833 0.00 0.00 39.93 2.71
233 234 3.323979 GGAGAGAGGTGTTTGGAGTAACA 59.676 47.826 0.00 0.00 35.75 2.41
234 235 3.579151 AGGAGAGAGGTGTTTGGAGTAAC 59.421 47.826 0.00 0.00 0.00 2.50
235 236 3.833070 GAGGAGAGAGGTGTTTGGAGTAA 59.167 47.826 0.00 0.00 0.00 2.24
236 237 3.181422 TGAGGAGAGAGGTGTTTGGAGTA 60.181 47.826 0.00 0.00 0.00 2.59
237 238 2.252714 GAGGAGAGAGGTGTTTGGAGT 58.747 52.381 0.00 0.00 0.00 3.85
238 239 2.251818 TGAGGAGAGAGGTGTTTGGAG 58.748 52.381 0.00 0.00 0.00 3.86
239 240 2.398754 TGAGGAGAGAGGTGTTTGGA 57.601 50.000 0.00 0.00 0.00 3.53
240 241 3.710209 AATGAGGAGAGAGGTGTTTGG 57.290 47.619 0.00 0.00 0.00 3.28
241 242 5.799213 ACTTAATGAGGAGAGAGGTGTTTG 58.201 41.667 0.00 0.00 0.00 2.93
242 243 6.497259 TGTACTTAATGAGGAGAGAGGTGTTT 59.503 38.462 0.00 0.00 0.00 2.83
243 244 6.017192 TGTACTTAATGAGGAGAGAGGTGTT 58.983 40.000 0.00 0.00 0.00 3.32
244 245 5.580998 TGTACTTAATGAGGAGAGAGGTGT 58.419 41.667 0.00 0.00 0.00 4.16
245 246 6.511416 CATGTACTTAATGAGGAGAGAGGTG 58.489 44.000 0.00 0.00 0.00 4.00
246 247 5.069781 GCATGTACTTAATGAGGAGAGAGGT 59.930 44.000 0.00 0.00 0.00 3.85
247 248 5.510520 GGCATGTACTTAATGAGGAGAGAGG 60.511 48.000 0.00 0.00 0.00 3.69
248 249 5.069648 TGGCATGTACTTAATGAGGAGAGAG 59.930 44.000 0.00 0.00 0.00 3.20
249 250 4.962362 TGGCATGTACTTAATGAGGAGAGA 59.038 41.667 0.00 0.00 0.00 3.10
250 251 5.053145 GTGGCATGTACTTAATGAGGAGAG 58.947 45.833 0.00 0.00 0.00 3.20
251 252 4.469586 TGTGGCATGTACTTAATGAGGAGA 59.530 41.667 0.00 0.00 0.00 3.71
252 253 4.769688 TGTGGCATGTACTTAATGAGGAG 58.230 43.478 0.00 0.00 0.00 3.69
253 254 4.835284 TGTGGCATGTACTTAATGAGGA 57.165 40.909 0.00 0.00 0.00 3.71
254 255 6.293626 GCTTATGTGGCATGTACTTAATGAGG 60.294 42.308 0.00 0.00 0.00 3.86
255 256 6.260714 TGCTTATGTGGCATGTACTTAATGAG 59.739 38.462 0.00 0.00 34.56 2.90
256 257 6.118852 TGCTTATGTGGCATGTACTTAATGA 58.881 36.000 0.00 0.00 34.56 2.57
257 258 6.375945 TGCTTATGTGGCATGTACTTAATG 57.624 37.500 0.00 0.00 34.56 1.90
258 259 7.403312 TTTGCTTATGTGGCATGTACTTAAT 57.597 32.000 0.00 0.00 39.54 1.40
259 260 6.825944 TTTGCTTATGTGGCATGTACTTAA 57.174 33.333 0.00 3.10 39.54 1.85
260 261 7.403312 AATTTGCTTATGTGGCATGTACTTA 57.597 32.000 0.00 0.00 39.54 2.24
261 262 5.920193 ATTTGCTTATGTGGCATGTACTT 57.080 34.783 0.00 0.00 39.54 2.24
262 263 5.920193 AATTTGCTTATGTGGCATGTACT 57.080 34.783 0.00 0.00 39.54 2.73
263 264 6.966435 AAAATTTGCTTATGTGGCATGTAC 57.034 33.333 0.00 0.00 39.54 2.90
264 265 7.385267 AGAAAAATTTGCTTATGTGGCATGTA 58.615 30.769 0.00 0.00 39.54 2.29
265 266 6.232692 AGAAAAATTTGCTTATGTGGCATGT 58.767 32.000 0.00 0.00 39.54 3.21
266 267 6.730960 AGAAAAATTTGCTTATGTGGCATG 57.269 33.333 0.00 0.00 39.54 4.06
267 268 6.149807 CCAAGAAAAATTTGCTTATGTGGCAT 59.850 34.615 0.00 0.00 39.54 4.40
268 269 5.469421 CCAAGAAAAATTTGCTTATGTGGCA 59.531 36.000 0.00 0.00 37.97 4.92
269 270 5.106594 CCCAAGAAAAATTTGCTTATGTGGC 60.107 40.000 0.00 0.00 0.00 5.01
270 271 6.229733 TCCCAAGAAAAATTTGCTTATGTGG 58.770 36.000 0.00 0.00 0.00 4.17
271 272 7.388500 ACATCCCAAGAAAAATTTGCTTATGTG 59.612 33.333 10.84 5.94 0.00 3.21
272 273 7.452562 ACATCCCAAGAAAAATTTGCTTATGT 58.547 30.769 7.27 7.27 0.00 2.29
273 274 7.910441 ACATCCCAAGAAAAATTTGCTTATG 57.090 32.000 0.00 2.86 0.00 1.90
274 275 8.815912 AGTACATCCCAAGAAAAATTTGCTTAT 58.184 29.630 0.00 0.00 0.00 1.73
275 276 8.189119 AGTACATCCCAAGAAAAATTTGCTTA 57.811 30.769 0.00 0.00 0.00 3.09
276 277 7.066307 AGTACATCCCAAGAAAAATTTGCTT 57.934 32.000 0.00 0.00 0.00 3.91
277 278 6.295292 GGAGTACATCCCAAGAAAAATTTGCT 60.295 38.462 0.00 0.00 43.01 3.91
278 279 5.869344 GGAGTACATCCCAAGAAAAATTTGC 59.131 40.000 0.00 0.00 43.01 3.68
293 294 4.996788 TTAGAAACGGAGGGAGTACATC 57.003 45.455 0.00 0.00 0.00 3.06
294 295 5.952347 ATTTAGAAACGGAGGGAGTACAT 57.048 39.130 0.00 0.00 0.00 2.29
295 296 7.427989 AATATTTAGAAACGGAGGGAGTACA 57.572 36.000 0.00 0.00 0.00 2.90
296 297 7.767659 ACAAATATTTAGAAACGGAGGGAGTAC 59.232 37.037 0.00 0.00 0.00 2.73
297 298 7.854337 ACAAATATTTAGAAACGGAGGGAGTA 58.146 34.615 0.00 0.00 0.00 2.59
298 299 6.718294 ACAAATATTTAGAAACGGAGGGAGT 58.282 36.000 0.00 0.00 0.00 3.85
299 300 7.048512 AGACAAATATTTAGAAACGGAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
300 301 6.954232 AGACAAATATTTAGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
301 302 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
302 303 8.947115 AGAAAGACAAATATTTAGAAACGGAGG 58.053 33.333 0.00 0.00 0.00 4.30
320 321 9.996554 TCACTTGTTGAAATATCTAGAAAGACA 57.003 29.630 0.00 0.00 33.57 3.41
329 330 9.302345 CGTATGTAGTCACTTGTTGAAATATCT 57.698 33.333 0.00 0.00 35.39 1.98
330 331 8.540492 CCGTATGTAGTCACTTGTTGAAATATC 58.460 37.037 0.00 0.00 35.39 1.63
331 332 8.255206 TCCGTATGTAGTCACTTGTTGAAATAT 58.745 33.333 0.00 0.00 35.39 1.28
332 333 7.604549 TCCGTATGTAGTCACTTGTTGAAATA 58.395 34.615 0.00 0.00 35.39 1.40
333 334 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
334 335 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
335 336 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
336 337 5.221283 TGTTCCGTATGTAGTCACTTGTTGA 60.221 40.000 0.00 0.00 0.00 3.18
337 338 4.986034 TGTTCCGTATGTAGTCACTTGTTG 59.014 41.667 0.00 0.00 0.00 3.33
338 339 5.204409 TGTTCCGTATGTAGTCACTTGTT 57.796 39.130 0.00 0.00 0.00 2.83
339 340 4.859304 TGTTCCGTATGTAGTCACTTGT 57.141 40.909 0.00 0.00 0.00 3.16
340 341 6.533819 TTTTGTTCCGTATGTAGTCACTTG 57.466 37.500 0.00 0.00 0.00 3.16
341 342 8.836268 TTATTTTGTTCCGTATGTAGTCACTT 57.164 30.769 0.00 0.00 0.00 3.16
342 343 8.092687 ACTTATTTTGTTCCGTATGTAGTCACT 58.907 33.333 0.00 0.00 0.00 3.41
343 344 8.248117 ACTTATTTTGTTCCGTATGTAGTCAC 57.752 34.615 0.00 0.00 0.00 3.67
344 345 9.926158 TTACTTATTTTGTTCCGTATGTAGTCA 57.074 29.630 0.00 0.00 0.00 3.41
353 354 9.498176 AGTGTAGATTTACTTATTTTGTTCCGT 57.502 29.630 0.00 0.00 0.00 4.69
354 355 9.968743 GAGTGTAGATTTACTTATTTTGTTCCG 57.031 33.333 0.00 0.00 0.00 4.30
395 396 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
396 397 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
409 410 9.482627 CTTTCTAGACATTTCATATGGACTACC 57.517 37.037 2.13 0.00 0.00 3.18
427 428 9.635520 CCGTTTCTAAGTATTTGTCTTTCTAGA 57.364 33.333 0.00 0.00 0.00 2.43
428 429 9.635520 TCCGTTTCTAAGTATTTGTCTTTCTAG 57.364 33.333 0.00 0.00 0.00 2.43
429 430 9.635520 CTCCGTTTCTAAGTATTTGTCTTTCTA 57.364 33.333 0.00 0.00 0.00 2.10
430 431 8.365647 TCTCCGTTTCTAAGTATTTGTCTTTCT 58.634 33.333 0.00 0.00 0.00 2.52
431 432 8.530269 TCTCCGTTTCTAAGTATTTGTCTTTC 57.470 34.615 0.00 0.00 0.00 2.62
432 433 8.365647 TCTCTCCGTTTCTAAGTATTTGTCTTT 58.634 33.333 0.00 0.00 0.00 2.52
433 434 7.893658 TCTCTCCGTTTCTAAGTATTTGTCTT 58.106 34.615 0.00 0.00 0.00 3.01
434 435 7.177041 ACTCTCTCCGTTTCTAAGTATTTGTCT 59.823 37.037 0.00 0.00 0.00 3.41
435 436 7.314393 ACTCTCTCCGTTTCTAAGTATTTGTC 58.686 38.462 0.00 0.00 0.00 3.18
436 437 7.229581 ACTCTCTCCGTTTCTAAGTATTTGT 57.770 36.000 0.00 0.00 0.00 2.83
437 438 9.804758 AATACTCTCTCCGTTTCTAAGTATTTG 57.195 33.333 0.00 0.00 35.85 2.32
440 441 8.772705 CGTAATACTCTCTCCGTTTCTAAGTAT 58.227 37.037 0.00 0.00 31.59 2.12
441 442 7.766278 ACGTAATACTCTCTCCGTTTCTAAGTA 59.234 37.037 0.00 0.00 0.00 2.24
442 443 6.597280 ACGTAATACTCTCTCCGTTTCTAAGT 59.403 38.462 0.00 0.00 0.00 2.24
443 444 7.014092 ACGTAATACTCTCTCCGTTTCTAAG 57.986 40.000 0.00 0.00 0.00 2.18
444 445 6.992063 ACGTAATACTCTCTCCGTTTCTAA 57.008 37.500 0.00 0.00 0.00 2.10
445 446 6.992063 AACGTAATACTCTCTCCGTTTCTA 57.008 37.500 0.00 0.00 35.24 2.10
446 447 5.893897 AACGTAATACTCTCTCCGTTTCT 57.106 39.130 0.00 0.00 35.24 2.52
447 448 6.780127 AGTAACGTAATACTCTCTCCGTTTC 58.220 40.000 0.00 0.00 39.08 2.78
448 449 6.749923 AGTAACGTAATACTCTCTCCGTTT 57.250 37.500 0.00 0.00 39.08 3.60
449 450 6.549952 CAAGTAACGTAATACTCTCTCCGTT 58.450 40.000 0.53 0.00 40.96 4.44
450 451 5.448360 GCAAGTAACGTAATACTCTCTCCGT 60.448 44.000 0.53 0.00 35.09 4.69
451 452 4.968788 GCAAGTAACGTAATACTCTCTCCG 59.031 45.833 0.53 0.00 35.09 4.63
452 453 6.134040 AGCAAGTAACGTAATACTCTCTCC 57.866 41.667 0.53 0.00 35.09 3.71
453 454 8.397148 ACTTAGCAAGTAACGTAATACTCTCTC 58.603 37.037 0.53 0.00 40.69 3.20
454 455 8.278729 ACTTAGCAAGTAACGTAATACTCTCT 57.721 34.615 0.53 4.24 40.69 3.10
455 456 8.908172 AACTTAGCAAGTAACGTAATACTCTC 57.092 34.615 0.53 0.00 41.91 3.20
456 457 9.780413 GTAACTTAGCAAGTAACGTAATACTCT 57.220 33.333 0.53 0.00 41.91 3.24
457 458 9.780413 AGTAACTTAGCAAGTAACGTAATACTC 57.220 33.333 0.53 0.00 41.91 2.59
460 461 9.573133 GGAAGTAACTTAGCAAGTAACGTAATA 57.427 33.333 0.00 0.00 41.91 0.98
461 462 8.090214 TGGAAGTAACTTAGCAAGTAACGTAAT 58.910 33.333 0.00 0.00 41.91 1.89
462 463 7.382218 GTGGAAGTAACTTAGCAAGTAACGTAA 59.618 37.037 0.00 0.00 41.91 3.18
463 464 6.863126 GTGGAAGTAACTTAGCAAGTAACGTA 59.137 38.462 0.00 0.00 41.91 3.57
464 465 5.693555 GTGGAAGTAACTTAGCAAGTAACGT 59.306 40.000 2.60 0.00 41.91 3.99
465 466 5.924825 AGTGGAAGTAACTTAGCAAGTAACG 59.075 40.000 2.60 0.00 41.91 3.18
466 467 6.704937 ACAGTGGAAGTAACTTAGCAAGTAAC 59.295 38.462 0.00 0.00 41.91 2.50
467 468 6.704493 CACAGTGGAAGTAACTTAGCAAGTAA 59.296 38.462 0.00 0.00 41.91 2.24
468 469 6.041182 TCACAGTGGAAGTAACTTAGCAAGTA 59.959 38.462 0.00 0.00 41.91 2.24
469 470 5.057149 CACAGTGGAAGTAACTTAGCAAGT 58.943 41.667 0.00 0.00 45.46 3.16
470 471 5.177696 GTCACAGTGGAAGTAACTTAGCAAG 59.822 44.000 0.00 0.00 0.00 4.01
471 472 5.054477 GTCACAGTGGAAGTAACTTAGCAA 58.946 41.667 0.00 0.00 0.00 3.91
472 473 4.502604 GGTCACAGTGGAAGTAACTTAGCA 60.503 45.833 0.00 0.00 0.00 3.49
473 474 3.995048 GGTCACAGTGGAAGTAACTTAGC 59.005 47.826 0.00 0.00 0.00 3.09
474 475 5.209818 TGGTCACAGTGGAAGTAACTTAG 57.790 43.478 0.00 0.00 0.00 2.18
475 476 4.502604 GCTGGTCACAGTGGAAGTAACTTA 60.503 45.833 0.00 0.00 46.62 2.24
476 477 3.744530 GCTGGTCACAGTGGAAGTAACTT 60.745 47.826 0.00 0.00 46.62 2.66
477 478 2.224305 GCTGGTCACAGTGGAAGTAACT 60.224 50.000 0.00 0.00 46.62 2.24
478 479 2.143925 GCTGGTCACAGTGGAAGTAAC 58.856 52.381 0.00 0.00 46.62 2.50
479 480 1.071699 GGCTGGTCACAGTGGAAGTAA 59.928 52.381 0.00 0.00 46.62 2.24
480 481 0.685097 GGCTGGTCACAGTGGAAGTA 59.315 55.000 0.00 0.00 46.62 2.24
481 482 1.056700 AGGCTGGTCACAGTGGAAGT 61.057 55.000 0.00 0.00 46.62 3.01
482 483 0.109342 AAGGCTGGTCACAGTGGAAG 59.891 55.000 0.00 0.00 46.62 3.46
483 484 1.071699 GTAAGGCTGGTCACAGTGGAA 59.928 52.381 0.00 0.00 46.62 3.53
484 485 0.685097 GTAAGGCTGGTCACAGTGGA 59.315 55.000 0.00 0.00 46.62 4.02
485 486 0.687354 AGTAAGGCTGGTCACAGTGG 59.313 55.000 0.00 0.00 46.62 4.00
486 487 1.344438 TGAGTAAGGCTGGTCACAGTG 59.656 52.381 0.00 0.00 46.62 3.66
487 488 1.344763 GTGAGTAAGGCTGGTCACAGT 59.655 52.381 15.56 0.00 46.62 3.55
488 489 1.344438 TGTGAGTAAGGCTGGTCACAG 59.656 52.381 18.02 0.00 43.33 3.66
489 490 1.070134 GTGTGAGTAAGGCTGGTCACA 59.930 52.381 18.02 18.02 45.39 3.58
490 491 1.344763 AGTGTGAGTAAGGCTGGTCAC 59.655 52.381 14.22 14.22 39.85 3.67
491 492 1.344438 CAGTGTGAGTAAGGCTGGTCA 59.656 52.381 0.00 0.00 0.00 4.02
492 493 1.344763 ACAGTGTGAGTAAGGCTGGTC 59.655 52.381 0.00 0.00 0.00 4.02
493 494 1.070758 CACAGTGTGAGTAAGGCTGGT 59.929 52.381 18.83 0.00 35.23 4.00
494 495 1.609061 CCACAGTGTGAGTAAGGCTGG 60.609 57.143 24.99 0.00 35.23 4.85
495 496 1.800805 CCACAGTGTGAGTAAGGCTG 58.199 55.000 24.99 0.29 35.23 4.85
496 497 0.035458 GCCACAGTGTGAGTAAGGCT 59.965 55.000 24.99 0.00 37.67 4.58
497 498 1.291877 CGCCACAGTGTGAGTAAGGC 61.292 60.000 24.99 16.53 35.23 4.35
498 499 1.291877 GCGCCACAGTGTGAGTAAGG 61.292 60.000 24.99 7.78 35.23 2.69
499 500 1.291877 GGCGCCACAGTGTGAGTAAG 61.292 60.000 24.80 8.42 35.23 2.34
500 501 1.301401 GGCGCCACAGTGTGAGTAA 60.301 57.895 24.80 0.00 35.23 2.24
501 502 2.342279 GGCGCCACAGTGTGAGTA 59.658 61.111 24.80 0.00 35.23 2.59
502 503 3.814615 CTGGCGCCACAGTGTGAGT 62.815 63.158 29.03 0.00 35.23 3.41
503 504 3.046087 CTGGCGCCACAGTGTGAG 61.046 66.667 29.03 17.84 35.23 3.51
513 514 3.851949 TAAGACTACTTAGGCTGGCGCC 61.852 54.545 22.73 22.73 41.95 6.53
514 515 0.175989 AAGACTACTTAGGCTGGCGC 59.824 55.000 0.00 0.00 41.95 6.53
515 516 2.541178 CGTAAGACTACTTAGGCTGGCG 60.541 54.545 0.00 0.00 41.95 5.69
516 517 2.426381 ACGTAAGACTACTTAGGCTGGC 59.574 50.000 0.00 0.00 41.95 4.85
517 518 5.333952 CGATACGTAAGACTACTTAGGCTGG 60.334 48.000 0.00 0.00 41.95 4.85
518 519 5.464722 TCGATACGTAAGACTACTTAGGCTG 59.535 44.000 0.00 0.00 41.95 4.85
519 520 5.605534 TCGATACGTAAGACTACTTAGGCT 58.394 41.667 0.00 0.00 45.60 4.58
520 521 5.914085 TCGATACGTAAGACTACTTAGGC 57.086 43.478 0.00 0.00 43.77 3.93
521 522 6.202570 AGCTTCGATACGTAAGACTACTTAGG 59.797 42.308 0.00 0.00 44.76 2.69
522 523 7.176285 AGCTTCGATACGTAAGACTACTTAG 57.824 40.000 0.00 0.00 38.97 2.18
523 524 6.074623 CGAGCTTCGATACGTAAGACTACTTA 60.075 42.308 0.00 0.00 43.74 2.24
524 525 5.276773 CGAGCTTCGATACGTAAGACTACTT 60.277 44.000 0.00 0.00 43.74 2.24
525 526 4.208873 CGAGCTTCGATACGTAAGACTACT 59.791 45.833 0.00 0.19 43.74 2.57
526 527 4.208047 TCGAGCTTCGATACGTAAGACTAC 59.792 45.833 0.00 0.00 44.82 2.73
527 528 4.363138 TCGAGCTTCGATACGTAAGACTA 58.637 43.478 0.00 0.00 44.82 2.59
528 529 3.193263 TCGAGCTTCGATACGTAAGACT 58.807 45.455 0.00 0.00 44.82 3.24
529 530 3.582444 TCGAGCTTCGATACGTAAGAC 57.418 47.619 0.00 0.00 44.82 3.01
540 541 4.161976 TCGCGACCTCGAGCTTCG 62.162 66.667 23.22 23.22 43.02 3.79
546 547 1.086067 ATTCGTACTCGCGACCTCGA 61.086 55.000 3.71 12.54 40.85 4.04
547 548 0.653897 GATTCGTACTCGCGACCTCG 60.654 60.000 3.71 10.21 40.85 4.63
548 549 0.316854 GGATTCGTACTCGCGACCTC 60.317 60.000 3.71 0.00 40.85 3.85
549 550 1.722636 GGGATTCGTACTCGCGACCT 61.723 60.000 3.71 0.00 40.85 3.85
550 551 1.298938 GGGATTCGTACTCGCGACC 60.299 63.158 3.71 1.32 40.85 4.79
551 552 0.591741 CTGGGATTCGTACTCGCGAC 60.592 60.000 3.71 0.00 40.85 5.19
552 553 1.028330 ACTGGGATTCGTACTCGCGA 61.028 55.000 9.26 9.26 39.28 5.87
553 554 0.866061 CACTGGGATTCGTACTCGCG 60.866 60.000 0.00 0.00 36.96 5.87
554 555 0.527817 CCACTGGGATTCGTACTCGC 60.528 60.000 0.00 0.00 35.59 5.03
555 556 0.527817 GCCACTGGGATTCGTACTCG 60.528 60.000 0.00 0.00 35.59 4.18
556 557 0.527817 CGCCACTGGGATTCGTACTC 60.528 60.000 0.00 0.00 35.59 2.59
557 558 1.255667 ACGCCACTGGGATTCGTACT 61.256 55.000 0.00 0.00 35.59 2.73
558 559 1.082117 CACGCCACTGGGATTCGTAC 61.082 60.000 0.00 0.00 35.59 3.67
559 560 1.216977 CACGCCACTGGGATTCGTA 59.783 57.895 0.00 0.00 35.59 3.43
560 561 2.047274 CACGCCACTGGGATTCGT 60.047 61.111 0.00 0.00 35.59 3.85
561 562 2.233605 TACCACGCCACTGGGATTCG 62.234 60.000 0.00 0.00 35.34 3.34
562 563 0.180406 ATACCACGCCACTGGGATTC 59.820 55.000 0.00 0.00 29.34 2.52
563 564 0.623723 AATACCACGCCACTGGGATT 59.376 50.000 0.00 0.00 39.72 3.01
564 565 0.623723 AAATACCACGCCACTGGGAT 59.376 50.000 0.00 0.00 36.25 3.85
565 566 0.402504 AAAATACCACGCCACTGGGA 59.597 50.000 0.00 0.00 35.34 4.37
566 567 1.067915 CAAAAATACCACGCCACTGGG 60.068 52.381 0.00 0.00 35.34 4.45
567 568 1.067915 CCAAAAATACCACGCCACTGG 60.068 52.381 0.00 0.00 37.33 4.00
568 569 1.668628 GCCAAAAATACCACGCCACTG 60.669 52.381 0.00 0.00 0.00 3.66
569 570 0.601057 GCCAAAAATACCACGCCACT 59.399 50.000 0.00 0.00 0.00 4.00
570 571 0.731174 CGCCAAAAATACCACGCCAC 60.731 55.000 0.00 0.00 0.00 5.01
571 572 1.581954 CGCCAAAAATACCACGCCA 59.418 52.632 0.00 0.00 0.00 5.69
572 573 1.153920 CCGCCAAAAATACCACGCC 60.154 57.895 0.00 0.00 0.00 5.68
573 574 0.455464 GACCGCCAAAAATACCACGC 60.455 55.000 0.00 0.00 0.00 5.34
574 575 1.161843 AGACCGCCAAAAATACCACG 58.838 50.000 0.00 0.00 0.00 4.94
575 576 3.653539 AAAGACCGCCAAAAATACCAC 57.346 42.857 0.00 0.00 0.00 4.16
576 577 4.674281 AAAAAGACCGCCAAAAATACCA 57.326 36.364 0.00 0.00 0.00 3.25
679 680 2.325857 CTATTGCGCGCCTTCAGC 59.674 61.111 30.77 0.00 38.52 4.26
680 681 1.089481 TTCCTATTGCGCGCCTTCAG 61.089 55.000 30.77 19.17 0.00 3.02
681 682 1.078778 TTCCTATTGCGCGCCTTCA 60.079 52.632 30.77 6.71 0.00 3.02
682 683 1.643832 CTTCCTATTGCGCGCCTTC 59.356 57.895 30.77 0.47 0.00 3.46
683 684 2.472909 GCTTCCTATTGCGCGCCTT 61.473 57.895 30.77 18.48 0.00 4.35
684 685 2.897350 GCTTCCTATTGCGCGCCT 60.897 61.111 30.77 18.71 0.00 5.52
685 686 2.886782 GAGCTTCCTATTGCGCGCC 61.887 63.158 30.77 11.42 0.00 6.53
686 687 2.628657 GAGCTTCCTATTGCGCGC 59.371 61.111 27.26 27.26 0.00 6.86
687 688 2.247437 GGGAGCTTCCTATTGCGCG 61.247 63.158 2.76 0.00 36.57 6.86
688 689 0.748005 TTGGGAGCTTCCTATTGCGC 60.748 55.000 13.68 0.00 36.57 6.09
689 690 1.750193 TTTGGGAGCTTCCTATTGCG 58.250 50.000 13.68 0.00 36.57 4.85
690 691 2.625314 GGATTTGGGAGCTTCCTATTGC 59.375 50.000 13.68 2.67 36.57 3.56
691 692 3.902218 TGGATTTGGGAGCTTCCTATTG 58.098 45.455 13.68 0.00 36.57 1.90
692 693 4.477249 CATGGATTTGGGAGCTTCCTATT 58.523 43.478 13.68 0.30 36.57 1.73
693 694 3.181425 CCATGGATTTGGGAGCTTCCTAT 60.181 47.826 13.68 5.73 36.57 2.57
694 695 2.175499 CCATGGATTTGGGAGCTTCCTA 59.825 50.000 13.68 0.44 36.57 2.94
695 696 1.063417 CCATGGATTTGGGAGCTTCCT 60.063 52.381 13.68 0.00 36.57 3.36
696 697 1.406903 CCATGGATTTGGGAGCTTCC 58.593 55.000 5.56 3.12 35.23 3.46
697 698 0.749049 GCCATGGATTTGGGAGCTTC 59.251 55.000 18.40 0.00 37.24 3.86
698 699 0.688749 GGCCATGGATTTGGGAGCTT 60.689 55.000 18.40 0.00 37.24 3.74
699 700 1.075748 GGCCATGGATTTGGGAGCT 60.076 57.895 18.40 0.00 37.24 4.09
700 701 2.136229 GGGCCATGGATTTGGGAGC 61.136 63.158 18.40 0.00 37.24 4.70
701 702 0.325484 TTGGGCCATGGATTTGGGAG 60.325 55.000 18.40 0.00 37.24 4.30
702 703 0.617249 GTTGGGCCATGGATTTGGGA 60.617 55.000 18.40 0.00 37.24 4.37
703 704 0.618393 AGTTGGGCCATGGATTTGGG 60.618 55.000 18.40 0.00 37.24 4.12
704 705 1.756538 GTAGTTGGGCCATGGATTTGG 59.243 52.381 18.40 0.00 39.94 3.28
794 796 2.730672 CGGAAAGCACGAGAAGCCG 61.731 63.158 0.00 0.00 0.00 5.52
795 797 1.228657 AACGGAAAGCACGAGAAGCC 61.229 55.000 0.00 0.00 34.93 4.35
796 798 0.586802 AAACGGAAAGCACGAGAAGC 59.413 50.000 0.00 0.00 34.93 3.86
797 799 2.639751 CAAAACGGAAAGCACGAGAAG 58.360 47.619 0.00 0.00 34.93 2.85
798 800 1.268335 GCAAAACGGAAAGCACGAGAA 60.268 47.619 0.00 0.00 34.93 2.87
808 810 0.179097 GCAAACTGGGCAAAACGGAA 60.179 50.000 0.00 0.00 0.00 4.30
862 864 6.038271 CGGGGTTTCTGGAGAACTTATTTATG 59.962 42.308 0.00 0.00 33.13 1.90
949 951 3.851128 GGGGTGAGAGGCGGTAGC 61.851 72.222 0.00 0.00 44.18 3.58
1210 1212 6.916387 CGATAGTACGGTCACACTTAAATCAT 59.084 38.462 0.00 0.00 0.00 2.45
1283 1341 9.403583 ACCATTAACACCTGAATATAAACGAAT 57.596 29.630 0.00 0.00 0.00 3.34
1333 1411 0.533978 TACGCCTGAAGCAGCACAAA 60.534 50.000 0.00 0.00 44.04 2.83
1338 1416 0.099436 CCAATTACGCCTGAAGCAGC 59.901 55.000 0.00 0.00 44.04 5.25
1400 1478 9.899226 GAGTGAATTTACAGAAACAATTAAGCT 57.101 29.630 2.93 0.00 0.00 3.74
1494 1583 6.558909 GGTAAGCTGATTCAGAATTCCAAAG 58.441 40.000 17.87 0.00 32.44 2.77
1609 1700 4.216257 GGTTCAGTCACACATGCAAATACT 59.784 41.667 0.00 0.00 0.00 2.12
1652 1748 2.769095 GACCCCTCTCACTAAAGCAGAT 59.231 50.000 0.00 0.00 0.00 2.90
1790 1893 7.244192 ACTTTGCTAGAAAAGACGAATATTGC 58.756 34.615 27.05 0.00 39.12 3.56
1826 1929 8.345306 AGTCTTCTCCCTTAATTAGAGTCCTAA 58.655 37.037 1.45 0.00 39.04 2.69
1935 2039 4.282449 TCCTTGAATACCGACTCAACTTCA 59.718 41.667 0.00 0.00 0.00 3.02
1937 2041 4.884668 TCCTTGAATACCGACTCAACTT 57.115 40.909 0.00 0.00 0.00 2.66
2216 2325 0.593128 GAAGCCACGTGTTGCATTCT 59.407 50.000 15.65 0.00 0.00 2.40
2222 2331 3.074412 AGGAATAAGAAGCCACGTGTTG 58.926 45.455 15.65 0.51 0.00 3.33
2238 2383 4.666512 AGTTCCACAATACAAGCAGGAAT 58.333 39.130 0.00 0.00 37.46 3.01
2249 2394 9.747898 AATGACTGGTAAATTAGTTCCACAATA 57.252 29.630 0.00 0.00 0.00 1.90
2306 2453 6.884836 ACCAATTACAGACTTTAATCTCCCAC 59.115 38.462 0.00 0.00 0.00 4.61
2313 2460 8.918202 TGAGTGAACCAATTACAGACTTTAAT 57.082 30.769 0.00 0.00 0.00 1.40
2547 3056 1.598701 AATGCGCTTCTTCTTGCCCC 61.599 55.000 9.73 0.00 0.00 5.80
2687 3198 8.328758 TCACATGGAACCTAAGAATGTCTAAAT 58.671 33.333 0.00 0.00 29.20 1.40
2691 3202 5.762179 TCACATGGAACCTAAGAATGTCT 57.238 39.130 0.00 0.00 29.20 3.41
2692 3203 7.253422 CAAATCACATGGAACCTAAGAATGTC 58.747 38.462 0.00 0.00 29.20 3.06
2795 3312 4.829064 TGAAGCAAGTAACATGTGTTCC 57.171 40.909 0.00 0.00 39.31 3.62
3177 3785 3.968649 TGTGTTTCGTACTGACTACCAC 58.031 45.455 0.00 0.00 0.00 4.16
3191 3807 9.516314 AAGCTACTTAACAAAAGAATGTGTTTC 57.484 29.630 0.00 0.00 38.80 2.78
3308 3925 5.353123 TGTTAGCAGAAATCATAAACGGACC 59.647 40.000 0.00 0.00 0.00 4.46
3312 3929 9.425893 CTAACATGTTAGCAGAAATCATAAACG 57.574 33.333 27.90 4.31 36.50 3.60
3321 3938 5.063204 AGCACACTAACATGTTAGCAGAAA 58.937 37.500 35.03 9.74 44.74 2.52
3417 4070 1.199097 GCACCTTGTATCAAACCGTGG 59.801 52.381 0.00 0.00 0.00 4.94
3587 4247 8.328758 ACTATAAACTGGAAGATCCACATTTGA 58.671 33.333 11.50 3.05 42.67 2.69
3590 4250 6.986817 CGACTATAAACTGGAAGATCCACATT 59.013 38.462 0.00 0.00 42.67 2.71
3722 4382 7.606456 TCAACTAATAAGCTTGAGTTAAGGGTG 59.394 37.037 17.67 9.39 36.87 4.61
3838 4570 8.420945 CGATATACTAGATTTTCTGTTCGCAAG 58.579 37.037 0.00 0.00 0.00 4.01
3840 4572 6.362551 GCGATATACTAGATTTTCTGTTCGCA 59.637 38.462 0.00 0.00 44.47 5.10
3843 4575 7.379750 AGGGCGATATACTAGATTTTCTGTTC 58.620 38.462 0.00 0.00 0.00 3.18
3848 4580 6.926313 ACAGAGGGCGATATACTAGATTTTC 58.074 40.000 0.00 0.00 0.00 2.29
3863 4596 3.536956 TGGAAGTATTTACAGAGGGCG 57.463 47.619 0.00 0.00 0.00 6.13
3896 4629 8.293157 TGATATTGTTTCATTCGTACAAAGCAA 58.707 29.630 0.00 0.00 35.62 3.91
3897 4630 7.811653 TGATATTGTTTCATTCGTACAAAGCA 58.188 30.769 0.00 0.00 35.62 3.91
3915 4648 7.465781 GCCCAAATTTCCGAAACAATGATATTG 60.466 37.037 0.00 0.28 0.00 1.90
3954 4687 4.559502 GCAAAGGAGGAAAACCATCAGAAC 60.560 45.833 0.00 0.00 0.00 3.01
3963 4696 5.984695 AATTCTAGGCAAAGGAGGAAAAC 57.015 39.130 0.00 0.00 0.00 2.43
3992 4725 4.881273 TCAGCTACAACAGAAAAGCTTTGA 59.119 37.500 13.54 0.00 42.52 2.69
4119 4875 6.897966 GGATACTGGACCAAGATATCCTATGA 59.102 42.308 21.62 0.00 38.75 2.15
4123 4879 5.090139 CTGGATACTGGACCAAGATATCCT 58.910 45.833 25.54 0.00 41.26 3.24
4124 4880 4.323104 GCTGGATACTGGACCAAGATATCC 60.323 50.000 21.89 21.89 41.12 2.59
4126 4882 4.497516 AGCTGGATACTGGACCAAGATAT 58.502 43.478 0.00 0.00 35.67 1.63
4127 4883 3.928754 AGCTGGATACTGGACCAAGATA 58.071 45.455 0.00 0.00 35.67 1.98
4128 4884 2.769209 AGCTGGATACTGGACCAAGAT 58.231 47.619 0.00 0.00 35.67 2.40
4129 4885 2.254152 AGCTGGATACTGGACCAAGA 57.746 50.000 0.00 0.00 35.67 3.02
4130 4886 2.766263 TGTAGCTGGATACTGGACCAAG 59.234 50.000 0.00 0.00 35.67 3.61
4131 4887 2.827755 TGTAGCTGGATACTGGACCAA 58.172 47.619 0.00 0.00 35.67 3.67
4132 4888 2.500098 GTTGTAGCTGGATACTGGACCA 59.500 50.000 0.00 0.00 35.79 4.02
4133 4889 2.500098 TGTTGTAGCTGGATACTGGACC 59.500 50.000 0.00 0.00 35.79 4.46
4134 4890 3.447586 TCTGTTGTAGCTGGATACTGGAC 59.552 47.826 0.00 0.00 35.79 4.02
4135 4891 3.708451 TCTGTTGTAGCTGGATACTGGA 58.292 45.455 0.00 0.00 35.79 3.86
4136 4892 4.471904 TTCTGTTGTAGCTGGATACTGG 57.528 45.455 0.00 0.00 35.79 4.00
4137 4893 5.163814 GCTTTTCTGTTGTAGCTGGATACTG 60.164 44.000 0.00 0.00 38.80 2.74
4138 4894 4.938226 GCTTTTCTGTTGTAGCTGGATACT 59.062 41.667 0.00 0.00 37.61 2.12
4139 4895 4.938226 AGCTTTTCTGTTGTAGCTGGATAC 59.062 41.667 0.00 0.00 42.07 2.24
4140 4896 5.165961 AGCTTTTCTGTTGTAGCTGGATA 57.834 39.130 0.00 0.00 42.07 2.59
4141 4897 4.026356 AGCTTTTCTGTTGTAGCTGGAT 57.974 40.909 0.00 0.00 42.07 3.41
4142 4898 3.492102 AGCTTTTCTGTTGTAGCTGGA 57.508 42.857 0.00 0.00 42.07 3.86
4143 4899 4.036734 TCAAAGCTTTTCTGTTGTAGCTGG 59.963 41.667 9.53 0.00 42.79 4.85
4144 4900 5.173774 TCAAAGCTTTTCTGTTGTAGCTG 57.826 39.130 9.53 0.00 42.79 4.24
4145 4901 5.835113 TTCAAAGCTTTTCTGTTGTAGCT 57.165 34.783 9.53 0.00 45.35 3.32
4146 4902 7.862873 AGTATTTCAAAGCTTTTCTGTTGTAGC 59.137 33.333 9.53 0.00 0.00 3.58
4147 4903 9.736023 AAGTATTTCAAAGCTTTTCTGTTGTAG 57.264 29.630 9.53 0.00 0.00 2.74
4149 4905 9.435688 AAAAGTATTTCAAAGCTTTTCTGTTGT 57.564 25.926 9.53 0.00 37.28 3.32
4174 4930 6.272792 TCCCTAGAACCCTACATACACAAAAA 59.727 38.462 0.00 0.00 0.00 1.94
4175 4931 5.786457 TCCCTAGAACCCTACATACACAAAA 59.214 40.000 0.00 0.00 0.00 2.44
4176 4932 5.343715 TCCCTAGAACCCTACATACACAAA 58.656 41.667 0.00 0.00 0.00 2.83
4177 4933 4.950361 TCCCTAGAACCCTACATACACAA 58.050 43.478 0.00 0.00 0.00 3.33
4178 4934 4.613265 TCCCTAGAACCCTACATACACA 57.387 45.455 0.00 0.00 0.00 3.72
4179 4935 6.496144 AATTCCCTAGAACCCTACATACAC 57.504 41.667 0.00 0.00 33.97 2.90
4180 4936 7.598248 TCTAATTCCCTAGAACCCTACATACA 58.402 38.462 0.00 0.00 33.97 2.29
4181 4937 8.532819 CATCTAATTCCCTAGAACCCTACATAC 58.467 40.741 0.00 0.00 33.97 2.39
4182 4938 8.461854 TCATCTAATTCCCTAGAACCCTACATA 58.538 37.037 0.00 0.00 33.97 2.29
4183 4939 7.313731 TCATCTAATTCCCTAGAACCCTACAT 58.686 38.462 0.00 0.00 33.97 2.29
4184 4940 6.689561 TCATCTAATTCCCTAGAACCCTACA 58.310 40.000 0.00 0.00 33.97 2.74
4185 4941 7.011382 TCTCATCTAATTCCCTAGAACCCTAC 58.989 42.308 0.00 0.00 33.97 3.18
4186 4942 7.175635 TCTCATCTAATTCCCTAGAACCCTA 57.824 40.000 0.00 0.00 33.97 3.53
4187 4943 6.044411 TCTCATCTAATTCCCTAGAACCCT 57.956 41.667 0.00 0.00 33.97 4.34
4188 4944 6.526526 GTTCTCATCTAATTCCCTAGAACCC 58.473 44.000 0.00 0.00 36.81 4.11
4190 4946 7.213678 CAGGTTCTCATCTAATTCCCTAGAAC 58.786 42.308 0.00 0.00 40.22 3.01
4191 4947 6.183361 GCAGGTTCTCATCTAATTCCCTAGAA 60.183 42.308 0.00 0.00 36.15 2.10
4192 4948 5.305644 GCAGGTTCTCATCTAATTCCCTAGA 59.694 44.000 0.00 0.00 32.53 2.43
4193 4949 5.306678 AGCAGGTTCTCATCTAATTCCCTAG 59.693 44.000 0.00 0.00 0.00 3.02
4194 4950 5.070981 CAGCAGGTTCTCATCTAATTCCCTA 59.929 44.000 0.00 0.00 0.00 3.53
4195 4951 4.043596 AGCAGGTTCTCATCTAATTCCCT 58.956 43.478 0.00 0.00 0.00 4.20
4196 4952 4.133078 CAGCAGGTTCTCATCTAATTCCC 58.867 47.826 0.00 0.00 0.00 3.97
4197 4953 4.133078 CCAGCAGGTTCTCATCTAATTCC 58.867 47.826 0.00 0.00 0.00 3.01
4198 4954 4.133078 CCCAGCAGGTTCTCATCTAATTC 58.867 47.826 0.00 0.00 0.00 2.17
4199 4955 4.162040 CCCAGCAGGTTCTCATCTAATT 57.838 45.455 0.00 0.00 0.00 1.40
4200 4956 3.853355 CCCAGCAGGTTCTCATCTAAT 57.147 47.619 0.00 0.00 0.00 1.73
4217 4973 2.827755 TCTGTTGTAGCTGGATACCCA 58.172 47.619 0.00 0.00 40.95 4.51
4218 4974 3.906720 TTCTGTTGTAGCTGGATACCC 57.093 47.619 0.00 0.00 0.00 3.69
4219 4975 4.395231 GGTTTTCTGTTGTAGCTGGATACC 59.605 45.833 0.00 0.00 0.00 2.73
4220 4976 4.395231 GGGTTTTCTGTTGTAGCTGGATAC 59.605 45.833 0.00 0.00 0.00 2.24
4221 4977 4.042311 TGGGTTTTCTGTTGTAGCTGGATA 59.958 41.667 0.00 0.00 0.00 2.59
4222 4978 3.181434 TGGGTTTTCTGTTGTAGCTGGAT 60.181 43.478 0.00 0.00 0.00 3.41
4223 4979 2.173782 TGGGTTTTCTGTTGTAGCTGGA 59.826 45.455 0.00 0.00 0.00 3.86
4224 4980 2.582052 TGGGTTTTCTGTTGTAGCTGG 58.418 47.619 0.00 0.00 0.00 4.85
4225 4981 4.853924 ATTGGGTTTTCTGTTGTAGCTG 57.146 40.909 0.00 0.00 0.00 4.24
4226 4982 5.598417 AGAAATTGGGTTTTCTGTTGTAGCT 59.402 36.000 0.00 0.00 42.78 3.32
4227 4983 5.842907 AGAAATTGGGTTTTCTGTTGTAGC 58.157 37.500 0.00 0.00 42.78 3.58
4228 4984 8.391075 TCTAGAAATTGGGTTTTCTGTTGTAG 57.609 34.615 9.16 0.23 43.84 2.74
4229 4985 8.626526 GTTCTAGAAATTGGGTTTTCTGTTGTA 58.373 33.333 6.78 0.00 43.84 2.41
4230 4986 7.417456 GGTTCTAGAAATTGGGTTTTCTGTTGT 60.417 37.037 6.78 0.00 43.84 3.32
4231 4987 6.923508 GGTTCTAGAAATTGGGTTTTCTGTTG 59.076 38.462 6.78 1.68 43.84 3.33
4232 4988 6.041637 GGGTTCTAGAAATTGGGTTTTCTGTT 59.958 38.462 6.78 0.00 43.84 3.16
4233 4989 5.538813 GGGTTCTAGAAATTGGGTTTTCTGT 59.461 40.000 6.78 0.00 43.84 3.41
4234 4990 5.775195 AGGGTTCTAGAAATTGGGTTTTCTG 59.225 40.000 6.78 1.59 43.84 3.02
4235 4991 5.965486 AGGGTTCTAGAAATTGGGTTTTCT 58.035 37.500 6.78 4.97 45.48 2.52
4236 4992 6.717997 TGTAGGGTTCTAGAAATTGGGTTTTC 59.282 38.462 6.78 0.00 36.13 2.29
4237 4993 6.616577 TGTAGGGTTCTAGAAATTGGGTTTT 58.383 36.000 6.78 0.00 0.00 2.43
4238 4994 6.208840 TGTAGGGTTCTAGAAATTGGGTTT 57.791 37.500 6.78 0.00 0.00 3.27
4239 4995 5.853572 TGTAGGGTTCTAGAAATTGGGTT 57.146 39.130 6.78 0.00 0.00 4.11
4240 4996 6.402981 AATGTAGGGTTCTAGAAATTGGGT 57.597 37.500 6.78 0.00 0.00 4.51
4241 4997 6.321435 GGAAATGTAGGGTTCTAGAAATTGGG 59.679 42.308 6.78 0.00 0.00 4.12
4242 4998 7.119387 AGGAAATGTAGGGTTCTAGAAATTGG 58.881 38.462 6.78 0.00 0.00 3.16
4243 4999 8.049721 AGAGGAAATGTAGGGTTCTAGAAATTG 58.950 37.037 6.78 0.00 0.00 2.32
4244 5000 8.164057 AGAGGAAATGTAGGGTTCTAGAAATT 57.836 34.615 6.78 0.00 0.00 1.82
4245 5001 7.757242 AGAGGAAATGTAGGGTTCTAGAAAT 57.243 36.000 6.78 0.00 0.00 2.17
4246 5002 7.458170 AGAAGAGGAAATGTAGGGTTCTAGAAA 59.542 37.037 6.78 0.00 0.00 2.52
4247 5003 6.960542 AGAAGAGGAAATGTAGGGTTCTAGAA 59.039 38.462 0.00 0.00 0.00 2.10
4248 5004 6.503944 AGAAGAGGAAATGTAGGGTTCTAGA 58.496 40.000 0.00 0.00 0.00 2.43
4249 5005 6.800072 AGAAGAGGAAATGTAGGGTTCTAG 57.200 41.667 0.00 0.00 0.00 2.43
4250 5006 6.960542 AGAAGAAGAGGAAATGTAGGGTTCTA 59.039 38.462 0.00 0.00 0.00 2.10
4251 5007 5.788014 AGAAGAAGAGGAAATGTAGGGTTCT 59.212 40.000 0.00 0.00 0.00 3.01
4252 5008 6.056090 AGAAGAAGAGGAAATGTAGGGTTC 57.944 41.667 0.00 0.00 0.00 3.62
4253 5009 6.455690 AAGAAGAAGAGGAAATGTAGGGTT 57.544 37.500 0.00 0.00 0.00 4.11
4254 5010 6.455690 AAAGAAGAAGAGGAAATGTAGGGT 57.544 37.500 0.00 0.00 0.00 4.34
4255 5011 6.717084 ACAAAAGAAGAAGAGGAAATGTAGGG 59.283 38.462 0.00 0.00 0.00 3.53
4256 5012 7.229506 ACACAAAAGAAGAAGAGGAAATGTAGG 59.770 37.037 0.00 0.00 0.00 3.18
4257 5013 8.072567 CACACAAAAGAAGAAGAGGAAATGTAG 58.927 37.037 0.00 0.00 0.00 2.74
4258 5014 7.556275 ACACACAAAAGAAGAAGAGGAAATGTA 59.444 33.333 0.00 0.00 0.00 2.29
4259 5015 6.378280 ACACACAAAAGAAGAAGAGGAAATGT 59.622 34.615 0.00 0.00 0.00 2.71
4260 5016 6.799512 ACACACAAAAGAAGAAGAGGAAATG 58.200 36.000 0.00 0.00 0.00 2.32
4311 5453 7.581476 ACAGGACACAATAAAAATAACGACAG 58.419 34.615 0.00 0.00 0.00 3.51
4315 5457 6.904498 TGGACAGGACACAATAAAAATAACG 58.096 36.000 0.00 0.00 0.00 3.18
4409 5551 3.442996 CTAAGCCTTAGCGCACTGT 57.557 52.632 11.47 0.00 46.67 3.55
4455 7933 1.470494 GTAGGCTTGAAAGAAGGCAGC 59.530 52.381 10.23 0.00 44.29 5.25
4459 7937 2.076863 CGGTGTAGGCTTGAAAGAAGG 58.923 52.381 0.00 0.00 0.00 3.46
4530 8016 4.588106 TCATCAAAATTGAACAAGGCCAGA 59.412 37.500 5.01 0.00 41.13 3.86
4549 8036 0.376152 CAAGGACGTGCATGCTCATC 59.624 55.000 20.33 13.45 0.00 2.92
4561 8048 4.319766 GGCAATAGAATATGTGCAAGGACG 60.320 45.833 0.00 0.00 38.78 4.79
4705 8193 7.148407 CCAAAGTAACATCAGTAATGACTCCAC 60.148 40.741 0.00 0.00 38.83 4.02
5093 8581 6.820656 GGACATGAGTTCACTGTCATCTTAAT 59.179 38.462 17.94 0.00 40.80 1.40
5095 8583 5.245977 TGGACATGAGTTCACTGTCATCTTA 59.754 40.000 17.94 5.11 40.80 2.10
5157 8655 8.792633 AGTCCATAATGTTTTTGAGAAATTCGA 58.207 29.630 0.00 0.00 0.00 3.71
5158 8656 8.970691 AGTCCATAATGTTTTTGAGAAATTCG 57.029 30.769 0.00 0.00 0.00 3.34
5293 8792 5.391629 GCATCGAAATCCGTAAACTTTCCTT 60.392 40.000 0.00 0.00 39.75 3.36
5296 8795 4.965062 TGCATCGAAATCCGTAAACTTTC 58.035 39.130 0.00 0.00 39.75 2.62
5334 8957 4.387862 CGTTATGAGTTTTGCTTCGGTACT 59.612 41.667 0.00 0.00 0.00 2.73
5339 8962 4.647291 AGACGTTATGAGTTTTGCTTCG 57.353 40.909 0.00 0.00 0.00 3.79
5377 9141 6.653020 TGATGTAGCAAAATGACAGGAGTAT 58.347 36.000 0.00 0.00 0.00 2.12
5461 9242 9.971922 ACTTGTAAATTCAGAAAAATTCTCAGG 57.028 29.630 0.00 0.00 38.11 3.86
5463 9244 9.248291 GCACTTGTAAATTCAGAAAAATTCTCA 57.752 29.630 0.00 0.00 38.11 3.27
5464 9245 9.248291 TGCACTTGTAAATTCAGAAAAATTCTC 57.752 29.630 0.00 0.00 38.11 2.87
5465 9246 9.034544 GTGCACTTGTAAATTCAGAAAAATTCT 57.965 29.630 10.32 0.00 41.70 2.40
5466 9247 8.816144 TGTGCACTTGTAAATTCAGAAAAATTC 58.184 29.630 19.41 0.00 0.00 2.17
5467 9248 8.715191 TGTGCACTTGTAAATTCAGAAAAATT 57.285 26.923 19.41 0.00 0.00 1.82
5468 9249 8.715191 TTGTGCACTTGTAAATTCAGAAAAAT 57.285 26.923 19.41 0.00 0.00 1.82
5586 9388 6.278363 CCCCGTTATCAATATCCTATAACCG 58.722 44.000 0.00 0.00 34.17 4.44
5721 9523 3.004839 CGTACATGATGGTAGGAGACAGG 59.995 52.174 0.00 0.00 32.36 4.00
5743 9547 6.467723 ACTGATCTGTCGATGTTTTTACAC 57.532 37.500 0.00 0.00 0.00 2.90
5966 9793 1.073199 AGGACCACCAAAAGGAGCG 59.927 57.895 0.00 0.00 38.94 5.03
5981 9811 2.838202 GGAGAACTGAACATACCCAGGA 59.162 50.000 0.00 0.00 34.85 3.86
6031 9870 0.710567 CGTTTACGACAGCAGCAGAG 59.289 55.000 0.00 0.00 43.02 3.35
6086 9928 2.222592 GATTGGATCGTAACGGCCG 58.777 57.895 26.86 26.86 0.00 6.13
6113 9955 4.387026 TGGTTCAAATCCTGGAACATCT 57.613 40.909 0.00 0.00 43.96 2.90
6201 10047 1.679977 GCCATCTTGAGCCTTGCCA 60.680 57.895 0.00 0.00 0.00 4.92
6238 10084 9.962783 GATAGAAGACCTTTCTAAAGCGTTATA 57.037 33.333 1.22 0.00 34.99 0.98
6239 10085 8.697292 AGATAGAAGACCTTTCTAAAGCGTTAT 58.303 33.333 1.22 0.00 34.99 1.89
6242 10088 6.153000 TGAGATAGAAGACCTTTCTAAAGCGT 59.847 38.462 1.22 0.00 34.06 5.07
6257 10103 7.445402 TGGTTTGTTTCTTCCTTGAGATAGAAG 59.555 37.037 0.00 0.00 38.68 2.85
6259 10105 6.837312 TGGTTTGTTTCTTCCTTGAGATAGA 58.163 36.000 0.00 0.00 0.00 1.98
6348 10270 6.273825 ACTATGACTTCCATGACGTATTGAC 58.726 40.000 0.00 0.00 36.71 3.18
6351 10273 7.584122 ACTACTATGACTTCCATGACGTATT 57.416 36.000 0.00 0.00 36.71 1.89
6385 10333 8.125448 GCTGTTCATCAAGTAGAAATAATCACC 58.875 37.037 0.00 0.00 0.00 4.02
6386 10334 8.887717 AGCTGTTCATCAAGTAGAAATAATCAC 58.112 33.333 0.00 0.00 0.00 3.06
6389 10342 9.624373 ATCAGCTGTTCATCAAGTAGAAATAAT 57.376 29.630 14.67 0.00 0.00 1.28
6427 10428 1.005294 GCCTGCGTGAACAGCAAATG 61.005 55.000 0.00 0.00 44.67 2.32
6449 10450 2.599645 CTTCCACCTGGATGCCTCGG 62.600 65.000 0.00 0.00 44.98 4.63
6562 10575 4.398631 CGCACAGCAACAAAGCAA 57.601 50.000 0.00 0.00 36.85 3.91
6592 10606 3.244249 ACTCAAGCAGGGTCTACTGAAAC 60.244 47.826 0.00 0.00 40.97 2.78
6612 10626 7.724061 AGTTTTACATTCATGTTCCCAACTACT 59.276 33.333 0.00 0.00 41.97 2.57
6614 10628 8.472007 AAGTTTTACATTCATGTTCCCAACTA 57.528 30.769 0.00 0.00 41.97 2.24
6636 10653 7.657761 CACTGTCTAGAAGGTGAATACAAAAGT 59.342 37.037 16.72 0.00 32.12 2.66
6637 10654 7.360438 GCACTGTCTAGAAGGTGAATACAAAAG 60.360 40.741 22.63 0.00 32.12 2.27
6638 10655 6.426937 GCACTGTCTAGAAGGTGAATACAAAA 59.573 38.462 22.63 0.00 32.12 2.44
6654 10681 1.411246 ACCGTCACAAAGCACTGTCTA 59.589 47.619 0.00 0.00 0.00 2.59
6660 10687 1.014352 AGTCAACCGTCACAAAGCAC 58.986 50.000 0.00 0.00 0.00 4.40
6746 10773 0.375454 CACCTGCGACGTGTTTTTCA 59.625 50.000 0.00 0.00 0.00 2.69
6825 10858 1.489560 AAGAAGACGGGGTGGAAGGG 61.490 60.000 0.00 0.00 0.00 3.95
6828 10861 0.473117 AGGAAGAAGACGGGGTGGAA 60.473 55.000 0.00 0.00 0.00 3.53
6905 10939 1.456287 GAACACTTCCTGGTGGGCT 59.544 57.895 0.00 0.00 41.09 5.19
6952 11011 3.691342 TACTTGGCGACGGCAGCT 61.691 61.111 23.73 14.96 42.47 4.24
6955 11014 0.388907 GTAAGTACTTGGCGACGGCA 60.389 55.000 21.29 21.29 42.47 5.69
6989 11048 1.905449 CGGAGTAAGTACTTGGCGAC 58.095 55.000 18.56 8.19 36.50 5.19
6990 11049 0.171903 GCGGAGTAAGTACTTGGCGA 59.828 55.000 18.56 0.00 36.50 5.54
6991 11050 0.804933 GGCGGAGTAAGTACTTGGCG 60.805 60.000 18.56 5.39 36.50 5.69
6993 11052 1.405121 GGTGGCGGAGTAAGTACTTGG 60.405 57.143 18.56 3.64 36.50 3.61
6995 11054 0.529378 CGGTGGCGGAGTAAGTACTT 59.471 55.000 13.68 13.68 36.50 2.24
6996 11055 1.941999 GCGGTGGCGGAGTAAGTACT 61.942 60.000 0.00 0.00 39.71 2.73
6998 11057 2.713967 GGCGGTGGCGGAGTAAGTA 61.714 63.158 0.00 0.00 41.24 2.24
7032 11106 2.278857 CGCTCGCAGGTAATCGCT 60.279 61.111 0.00 0.00 0.00 4.93
7046 11120 0.517316 GTTGAAATTCCAGCGACGCT 59.483 50.000 18.46 18.46 40.77 5.07
7133 11229 1.071987 CAGCTCAAGGTGGACTGCA 59.928 57.895 1.23 0.00 39.67 4.41
7135 11231 1.673665 GGCAGCTCAAGGTGGACTG 60.674 63.158 10.90 0.00 43.24 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.