Multiple sequence alignment - TraesCS2A01G212200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G212200 chr2A 100.000 3452 0 0 1 3452 197090756 197087305 0.000000e+00 6375.0
1 TraesCS2A01G212200 chr2D 89.494 2646 118 56 608 3164 181324701 181322127 0.000000e+00 3199.0
2 TraesCS2A01G212200 chr2D 87.389 452 28 12 1 429 181325254 181324809 3.100000e-135 492.0
3 TraesCS2A01G212200 chr2D 91.667 60 2 2 504 563 181324763 181324707 2.860000e-11 80.5
4 TraesCS2A01G212200 chr2D 100.000 30 0 0 480 509 181324823 181324794 4.810000e-04 56.5
5 TraesCS2A01G212200 chr2B 87.152 1292 56 43 608 1829 237982631 237981380 0.000000e+00 1365.0
6 TraesCS2A01G212200 chr2B 89.965 857 34 14 2018 2841 237981300 237980463 0.000000e+00 1059.0
7 TraesCS2A01G212200 chr2B 86.168 441 32 13 1 429 237983126 237982703 1.890000e-122 449.0
8 TraesCS2A01G212200 chr2B 91.667 84 4 2 480 563 237982717 237982637 2.820000e-21 113.0
9 TraesCS2A01G212200 chr1A 72.441 254 63 7 2983 3233 284154939 284154690 1.330000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G212200 chr2A 197087305 197090756 3451 True 6375.0 6375 100.0000 1 3452 1 chr2A.!!$R1 3451
1 TraesCS2A01G212200 chr2D 181322127 181325254 3127 True 957.0 3199 92.1375 1 3164 4 chr2D.!!$R1 3163
2 TraesCS2A01G212200 chr2B 237980463 237983126 2663 True 746.5 1365 88.7380 1 2841 4 chr2B.!!$R1 2840

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
107 112 0.035458 AGTTTCAGAGACCTTGCCGG 59.965 55.0 0.00 0.0 39.35 6.13 F
577 652 0.036294 GAGGGAGGAAAGAACACCGG 60.036 60.0 0.00 0.0 0.00 5.28 F
773 857 0.097150 GTTGCTTTCCCGCGAGATTC 59.903 55.0 8.23 0.0 0.00 2.52 F
1307 1438 0.250424 CTGCACTGATCACACACCCA 60.250 55.0 0.00 0.0 0.00 4.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1761 1927 0.037419 GATTGCGGCATTGGTTGGTT 60.037 50.0 2.28 0.00 0.00 3.67 R
2011 2203 0.109179 GGCGATGAAGCAATGCACAA 60.109 50.0 8.35 0.00 39.27 3.33 R
2013 2205 0.248377 GAGGCGATGAAGCAATGCAC 60.248 55.0 8.35 1.42 39.27 4.57 R
3170 3410 0.033781 ATTGCAAGCGTGTTTGGCAT 59.966 45.0 4.94 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 3.188048 CAGCTACTGTGCCAGAAAGAAAG 59.812 47.826 8.91 0.00 35.18 2.62
70 71 3.071602 AGCTACTGTGCCAGAAAGAAAGA 59.928 43.478 8.91 0.00 35.18 2.52
71 72 3.815401 GCTACTGTGCCAGAAAGAAAGAA 59.185 43.478 8.91 0.00 35.18 2.52
73 74 5.048434 GCTACTGTGCCAGAAAGAAAGAAAT 60.048 40.000 8.91 0.00 35.18 2.17
74 75 5.444663 ACTGTGCCAGAAAGAAAGAAATC 57.555 39.130 8.91 0.00 35.18 2.17
75 76 4.023707 ACTGTGCCAGAAAGAAAGAAATCG 60.024 41.667 8.91 0.00 35.18 3.34
77 78 2.819608 TGCCAGAAAGAAAGAAATCGGG 59.180 45.455 0.00 0.00 0.00 5.14
78 79 3.081804 GCCAGAAAGAAAGAAATCGGGA 58.918 45.455 0.00 0.00 29.89 5.14
99 104 7.980099 TCGGGAAAGATATAAAGTTTCAGAGAC 59.020 37.037 0.00 0.00 32.77 3.36
107 112 0.035458 AGTTTCAGAGACCTTGCCGG 59.965 55.000 0.00 0.00 39.35 6.13
114 119 1.134280 AGAGACCTTGCCGGATCATTG 60.134 52.381 5.05 0.00 36.31 2.82
124 129 2.739292 CCGGATCATTGGTGTAGTACG 58.261 52.381 0.00 0.00 0.00 3.67
397 436 1.131693 TGTACCATCGTCTGCTGTACG 59.868 52.381 8.51 8.51 41.64 3.67
414 453 1.515081 ACGTGTACCACCCATTTTCG 58.485 50.000 0.00 0.00 0.00 3.46
415 454 1.070445 ACGTGTACCACCCATTTTCGA 59.930 47.619 0.00 0.00 0.00 3.71
416 455 2.144730 CGTGTACCACCCATTTTCGAA 58.855 47.619 0.00 0.00 0.00 3.71
417 456 2.548904 CGTGTACCACCCATTTTCGAAA 59.451 45.455 6.47 6.47 0.00 3.46
418 457 3.189702 CGTGTACCACCCATTTTCGAAAT 59.810 43.478 12.12 0.00 0.00 2.17
419 458 4.670735 CGTGTACCACCCATTTTCGAAATC 60.671 45.833 12.12 0.00 0.00 2.17
420 459 4.216687 GTGTACCACCCATTTTCGAAATCA 59.783 41.667 12.12 0.00 0.00 2.57
421 460 5.013547 TGTACCACCCATTTTCGAAATCAT 58.986 37.500 12.12 0.00 0.00 2.45
422 461 6.094325 GTGTACCACCCATTTTCGAAATCATA 59.906 38.462 12.12 0.00 0.00 2.15
423 462 6.659668 TGTACCACCCATTTTCGAAATCATAA 59.340 34.615 12.12 0.00 0.00 1.90
424 463 6.790232 ACCACCCATTTTCGAAATCATAAT 57.210 33.333 12.12 0.00 0.00 1.28
425 464 7.889873 ACCACCCATTTTCGAAATCATAATA 57.110 32.000 12.12 0.00 0.00 0.98
426 465 7.712797 ACCACCCATTTTCGAAATCATAATAC 58.287 34.615 12.12 0.00 0.00 1.89
427 466 7.145323 CCACCCATTTTCGAAATCATAATACC 58.855 38.462 12.12 0.00 0.00 2.73
428 467 6.855914 CACCCATTTTCGAAATCATAATACCG 59.144 38.462 12.12 0.00 0.00 4.02
429 468 6.544564 ACCCATTTTCGAAATCATAATACCGT 59.455 34.615 12.12 0.00 0.00 4.83
430 469 7.067737 ACCCATTTTCGAAATCATAATACCGTT 59.932 33.333 12.12 0.00 0.00 4.44
431 470 7.918562 CCCATTTTCGAAATCATAATACCGTTT 59.081 33.333 12.12 0.00 0.00 3.60
432 471 9.296400 CCATTTTCGAAATCATAATACCGTTTT 57.704 29.630 12.12 0.00 0.00 2.43
456 495 3.690475 TTTCGAAAAGGAGGAGTACCC 57.310 47.619 8.44 0.00 36.73 3.69
457 496 2.314071 TCGAAAAGGAGGAGTACCCA 57.686 50.000 3.60 0.00 37.41 4.51
458 497 2.829023 TCGAAAAGGAGGAGTACCCAT 58.171 47.619 3.60 0.00 37.41 4.00
459 498 2.764572 TCGAAAAGGAGGAGTACCCATC 59.235 50.000 3.60 0.00 37.41 3.51
460 499 2.500098 CGAAAAGGAGGAGTACCCATCA 59.500 50.000 3.60 0.00 37.41 3.07
461 500 3.055385 CGAAAAGGAGGAGTACCCATCAA 60.055 47.826 3.60 0.00 37.41 2.57
462 501 4.518249 GAAAAGGAGGAGTACCCATCAAG 58.482 47.826 3.60 0.00 37.41 3.02
463 502 1.501582 AGGAGGAGTACCCATCAAGC 58.498 55.000 3.60 0.00 37.41 4.01
464 503 0.105039 GGAGGAGTACCCATCAAGCG 59.895 60.000 3.60 0.00 37.41 4.68
465 504 1.112113 GAGGAGTACCCATCAAGCGA 58.888 55.000 3.60 0.00 37.41 4.93
466 505 1.689273 GAGGAGTACCCATCAAGCGAT 59.311 52.381 3.60 0.00 37.41 4.58
468 507 1.221414 GAGTACCCATCAAGCGATGC 58.779 55.000 0.00 0.00 46.59 3.91
469 508 0.541392 AGTACCCATCAAGCGATGCA 59.459 50.000 0.00 0.00 46.59 3.96
470 509 1.141657 AGTACCCATCAAGCGATGCAT 59.858 47.619 0.00 0.00 46.59 3.96
471 510 2.368548 AGTACCCATCAAGCGATGCATA 59.631 45.455 0.00 0.00 46.59 3.14
472 511 1.597742 ACCCATCAAGCGATGCATAC 58.402 50.000 0.00 0.00 46.59 2.39
473 512 1.134128 ACCCATCAAGCGATGCATACA 60.134 47.619 0.00 0.00 46.59 2.29
474 513 1.534163 CCCATCAAGCGATGCATACAG 59.466 52.381 0.00 0.00 46.59 2.74
475 514 1.069432 CCATCAAGCGATGCATACAGC 60.069 52.381 0.00 6.15 46.59 4.40
476 515 1.069432 CATCAAGCGATGCATACAGCC 60.069 52.381 15.04 0.00 42.54 4.85
477 516 0.107752 TCAAGCGATGCATACAGCCA 60.108 50.000 15.04 1.04 44.83 4.75
478 517 0.949397 CAAGCGATGCATACAGCCAT 59.051 50.000 15.04 5.02 44.83 4.40
538 613 5.482526 ACACCTGAAACTTTACCACCTTTTT 59.517 36.000 0.00 0.00 0.00 1.94
541 616 6.127451 ACCTGAAACTTTACCACCTTTTTCAG 60.127 38.462 12.76 12.76 44.88 3.02
542 617 6.127451 CCTGAAACTTTACCACCTTTTTCAGT 60.127 38.462 16.56 0.00 44.27 3.41
543 618 7.067737 CCTGAAACTTTACCACCTTTTTCAGTA 59.932 37.037 16.56 0.00 44.27 2.74
544 619 7.992008 TGAAACTTTACCACCTTTTTCAGTAG 58.008 34.615 0.00 0.00 31.21 2.57
563 638 3.446442 AGTAGTAACCGTGAAGAGGGA 57.554 47.619 0.00 0.00 0.00 4.20
564 639 3.354467 AGTAGTAACCGTGAAGAGGGAG 58.646 50.000 0.00 0.00 0.00 4.30
565 640 1.558233 AGTAACCGTGAAGAGGGAGG 58.442 55.000 0.00 0.00 0.00 4.30
566 641 1.076677 AGTAACCGTGAAGAGGGAGGA 59.923 52.381 0.00 0.00 0.00 3.71
568 643 1.430992 AACCGTGAAGAGGGAGGAAA 58.569 50.000 0.00 0.00 0.00 3.13
569 644 0.977395 ACCGTGAAGAGGGAGGAAAG 59.023 55.000 0.00 0.00 0.00 2.62
570 645 1.267121 CCGTGAAGAGGGAGGAAAGA 58.733 55.000 0.00 0.00 0.00 2.52
571 646 1.623811 CCGTGAAGAGGGAGGAAAGAA 59.376 52.381 0.00 0.00 0.00 2.52
572 647 2.613223 CCGTGAAGAGGGAGGAAAGAAC 60.613 54.545 0.00 0.00 0.00 3.01
573 648 2.037251 CGTGAAGAGGGAGGAAAGAACA 59.963 50.000 0.00 0.00 0.00 3.18
574 649 3.403968 GTGAAGAGGGAGGAAAGAACAC 58.596 50.000 0.00 0.00 0.00 3.32
575 650 2.372172 TGAAGAGGGAGGAAAGAACACC 59.628 50.000 0.00 0.00 0.00 4.16
576 651 0.977395 AGAGGGAGGAAAGAACACCG 59.023 55.000 0.00 0.00 0.00 4.94
577 652 0.036294 GAGGGAGGAAAGAACACCGG 60.036 60.000 0.00 0.00 0.00 5.28
578 653 1.002502 GGGAGGAAAGAACACCGGG 60.003 63.158 6.32 0.00 0.00 5.73
579 654 1.486145 GGGAGGAAAGAACACCGGGA 61.486 60.000 6.32 0.00 0.00 5.14
580 655 0.036294 GGAGGAAAGAACACCGGGAG 60.036 60.000 6.32 0.00 0.00 4.30
581 656 0.673956 GAGGAAAGAACACCGGGAGC 60.674 60.000 6.32 0.00 0.00 4.70
582 657 1.128188 AGGAAAGAACACCGGGAGCT 61.128 55.000 6.32 0.00 0.00 4.09
583 658 0.673956 GGAAAGAACACCGGGAGCTC 60.674 60.000 6.32 4.71 0.00 4.09
584 659 0.673956 GAAAGAACACCGGGAGCTCC 60.674 60.000 25.59 25.59 0.00 4.70
585 660 1.128188 AAAGAACACCGGGAGCTCCT 61.128 55.000 31.36 11.45 35.95 3.69
586 661 1.545706 AAGAACACCGGGAGCTCCTC 61.546 60.000 31.36 19.65 35.95 3.71
587 662 3.358076 GAACACCGGGAGCTCCTCG 62.358 68.421 31.36 28.93 35.95 4.63
597 672 3.213402 GCTCCTCGCTCGCTACCT 61.213 66.667 0.00 0.00 35.14 3.08
598 673 3.027292 CTCCTCGCTCGCTACCTC 58.973 66.667 0.00 0.00 0.00 3.85
599 674 2.887889 CTCCTCGCTCGCTACCTCG 61.888 68.421 0.00 0.00 0.00 4.63
600 675 3.955101 CCTCGCTCGCTACCTCGG 61.955 72.222 0.00 0.00 0.00 4.63
601 676 3.203412 CTCGCTCGCTACCTCGGT 61.203 66.667 0.00 0.00 0.00 4.69
602 677 3.456431 CTCGCTCGCTACCTCGGTG 62.456 68.421 0.00 0.00 0.00 4.94
604 679 4.129737 GCTCGCTACCTCGGTGCA 62.130 66.667 0.00 0.00 32.76 4.57
605 680 2.103143 CTCGCTACCTCGGTGCAG 59.897 66.667 0.00 0.00 0.00 4.41
606 681 2.675423 TCGCTACCTCGGTGCAGT 60.675 61.111 0.00 0.00 0.00 4.40
663 747 1.470112 GCAACTAACTCGGCTCTCTCC 60.470 57.143 0.00 0.00 0.00 3.71
664 748 1.819288 CAACTAACTCGGCTCTCTCCA 59.181 52.381 0.00 0.00 0.00 3.86
665 749 2.217510 ACTAACTCGGCTCTCTCCAA 57.782 50.000 0.00 0.00 0.00 3.53
666 750 2.096248 ACTAACTCGGCTCTCTCCAAG 58.904 52.381 0.00 0.00 0.00 3.61
667 751 1.407258 CTAACTCGGCTCTCTCCAAGG 59.593 57.143 0.00 0.00 0.00 3.61
668 752 0.251832 AACTCGGCTCTCTCCAAGGA 60.252 55.000 0.00 0.00 0.00 3.36
670 754 0.967887 CTCGGCTCTCTCCAAGGACA 60.968 60.000 0.00 0.00 0.00 4.02
671 755 1.216710 CGGCTCTCTCCAAGGACAC 59.783 63.158 0.00 0.00 0.00 3.67
674 758 0.172352 GCTCTCTCCAAGGACACGAG 59.828 60.000 0.00 0.00 0.00 4.18
675 759 0.814457 CTCTCTCCAAGGACACGAGG 59.186 60.000 0.00 0.00 0.00 4.63
676 760 0.404426 TCTCTCCAAGGACACGAGGA 59.596 55.000 0.00 0.00 0.00 3.71
678 762 0.612174 TCTCCAAGGACACGAGGAGG 60.612 60.000 7.41 0.00 46.02 4.30
679 763 1.608717 CTCCAAGGACACGAGGAGGG 61.609 65.000 0.00 0.00 43.07 4.30
680 764 1.609501 CCAAGGACACGAGGAGGGA 60.610 63.158 0.00 0.00 0.00 4.20
681 765 1.608717 CCAAGGACACGAGGAGGGAG 61.609 65.000 0.00 0.00 0.00 4.30
682 766 1.305381 AAGGACACGAGGAGGGAGG 60.305 63.158 0.00 0.00 0.00 4.30
683 767 2.760385 GGACACGAGGAGGGAGGG 60.760 72.222 0.00 0.00 0.00 4.30
684 768 2.359404 GACACGAGGAGGGAGGGA 59.641 66.667 0.00 0.00 0.00 4.20
685 769 1.755008 GACACGAGGAGGGAGGGAG 60.755 68.421 0.00 0.00 0.00 4.30
686 770 2.443016 CACGAGGAGGGAGGGAGG 60.443 72.222 0.00 0.00 0.00 4.30
687 771 3.756783 ACGAGGAGGGAGGGAGGG 61.757 72.222 0.00 0.00 0.00 4.30
688 772 3.430497 CGAGGAGGGAGGGAGGGA 61.430 72.222 0.00 0.00 0.00 4.20
689 773 2.612251 GAGGAGGGAGGGAGGGAG 59.388 72.222 0.00 0.00 0.00 4.30
750 834 1.603739 GCGTTGGAGCCCTTCCTTT 60.604 57.895 0.00 0.00 46.92 3.11
765 849 1.371635 CTTTGCGGTTGCTTTCCCG 60.372 57.895 0.00 0.00 46.90 5.14
769 853 3.788766 CGGTTGCTTTCCCGCGAG 61.789 66.667 8.23 0.00 37.43 5.03
770 854 2.358247 GGTTGCTTTCCCGCGAGA 60.358 61.111 8.23 0.00 0.00 4.04
771 855 1.745489 GGTTGCTTTCCCGCGAGAT 60.745 57.895 8.23 0.00 0.00 2.75
773 857 0.097150 GTTGCTTTCCCGCGAGATTC 59.903 55.000 8.23 0.00 0.00 2.52
774 858 1.024579 TTGCTTTCCCGCGAGATTCC 61.025 55.000 8.23 0.00 0.00 3.01
919 1042 1.216710 CTGCCCTCTGGTCTCGTTC 59.783 63.158 0.00 0.00 0.00 3.95
1068 1195 2.611518 GTGAAGATGGAGGACTTCGTG 58.388 52.381 0.00 0.00 43.46 4.35
1304 1435 4.434725 CGATTAACTGCACTGATCACACAC 60.435 45.833 0.00 0.00 0.00 3.82
1305 1436 1.597742 AACTGCACTGATCACACACC 58.402 50.000 0.00 0.00 0.00 4.16
1306 1437 0.250467 ACTGCACTGATCACACACCC 60.250 55.000 0.00 0.00 0.00 4.61
1307 1438 0.250424 CTGCACTGATCACACACCCA 60.250 55.000 0.00 0.00 0.00 4.51
1308 1439 0.534877 TGCACTGATCACACACCCAC 60.535 55.000 0.00 0.00 0.00 4.61
1327 1458 1.609210 CCCACCCCACCCAACAATC 60.609 63.158 0.00 0.00 0.00 2.67
1521 1687 2.936032 AAGGAGTCCACCCTGGCC 60.936 66.667 12.86 0.00 37.47 5.36
1639 1805 1.153147 GCCTCCTGTTCCGAATCCC 60.153 63.158 0.00 0.00 0.00 3.85
1680 1846 5.929697 TCCATTATCAGGTACGTACGTAG 57.070 43.478 27.48 16.37 0.00 3.51
1697 1863 3.315749 ACGTAGTAACCTCTGCTATGAGC 59.684 47.826 0.00 0.00 41.94 4.26
1706 1872 4.349048 ACCTCTGCTATGAGCCATGAATAA 59.651 41.667 0.00 0.00 41.51 1.40
1715 1881 9.482627 GCTATGAGCCATGAATAACTATATACC 57.517 37.037 0.00 0.00 34.48 2.73
1720 1886 8.671987 AGCCATGAATAACTATATACCAGAGT 57.328 34.615 0.00 0.00 0.00 3.24
1721 1887 9.769677 AGCCATGAATAACTATATACCAGAGTA 57.230 33.333 0.00 0.00 0.00 2.59
1775 1941 1.135315 CAGATCAACCAACCAATGCCG 60.135 52.381 0.00 0.00 0.00 5.69
1802 1968 2.159240 TGCAGAATACGATCGCTCAACT 60.159 45.455 16.60 5.84 0.00 3.16
1829 1995 4.549458 CACACTGGCCAAATACTTTTCAG 58.451 43.478 7.01 0.00 0.00 3.02
1886 2078 7.433680 AGGCGAGAAATTCACACTTTTATTTT 58.566 30.769 0.00 0.00 0.00 1.82
1887 2079 7.382218 AGGCGAGAAATTCACACTTTTATTTTG 59.618 33.333 0.00 0.00 0.00 2.44
1998 2190 6.262273 ACAGATTTGTGTACAAGGTACAAAGG 59.738 38.462 10.50 8.21 44.51 3.11
2008 2200 8.243426 TGTACAAGGTACAAAGGTATAACGTAG 58.757 37.037 6.75 0.00 0.00 3.51
2010 2202 8.348285 ACAAGGTACAAAGGTATAACGTAGTA 57.652 34.615 0.00 0.00 45.00 1.82
2011 2203 8.971073 ACAAGGTACAAAGGTATAACGTAGTAT 58.029 33.333 0.00 0.00 45.00 2.12
2012 2204 9.807649 CAAGGTACAAAGGTATAACGTAGTATT 57.192 33.333 0.00 0.00 45.00 1.89
2013 2205 9.807649 AAGGTACAAAGGTATAACGTAGTATTG 57.192 33.333 0.00 0.00 45.00 1.90
2014 2206 8.971073 AGGTACAAAGGTATAACGTAGTATTGT 58.029 33.333 0.00 0.00 45.00 2.71
2015 2207 9.023967 GGTACAAAGGTATAACGTAGTATTGTG 57.976 37.037 0.00 0.00 45.00 3.33
2016 2208 7.529880 ACAAAGGTATAACGTAGTATTGTGC 57.470 36.000 0.00 0.00 45.00 4.57
2039 2231 0.529555 GCTTCATCGCCTCCAGAGTC 60.530 60.000 0.00 0.00 0.00 3.36
2068 2260 0.107456 ATCCAGCCGATTTCTCGCAT 59.893 50.000 0.00 0.00 43.66 4.73
2069 2261 0.750249 TCCAGCCGATTTCTCGCATA 59.250 50.000 0.00 0.00 43.66 3.14
2091 2283 1.148310 AACCGAGCTGTTCATGTTCG 58.852 50.000 0.00 0.00 37.77 3.95
2118 2310 1.411977 CAGGTGGAGCTGATACCTCTG 59.588 57.143 9.56 4.97 42.72 3.35
2277 2469 6.772716 AGAGTTTCTTCTGCATTGAGGTAAAA 59.227 34.615 0.00 0.00 0.00 1.52
2278 2470 7.285401 AGAGTTTCTTCTGCATTGAGGTAAAAA 59.715 33.333 0.00 0.00 0.00 1.94
2491 2711 7.487484 TGCAAACAATAACTCACAGAATTCAA 58.513 30.769 8.44 0.00 0.00 2.69
2537 2757 6.009589 TCTGTGGAAATGCATCCTCTTTTTA 58.990 36.000 0.00 0.00 40.35 1.52
2538 2758 6.151648 TCTGTGGAAATGCATCCTCTTTTTAG 59.848 38.462 0.00 0.00 40.35 1.85
2539 2759 6.009589 TGTGGAAATGCATCCTCTTTTTAGA 58.990 36.000 0.00 0.00 40.35 2.10
2540 2760 6.493115 TGTGGAAATGCATCCTCTTTTTAGAA 59.507 34.615 0.00 0.00 40.35 2.10
2769 3003 3.940209 TTGCCTCAAGCCATTTAGTTG 57.060 42.857 0.00 0.00 42.71 3.16
2779 3013 2.493278 GCCATTTAGTTGCCAGTGACAT 59.507 45.455 0.00 0.00 0.00 3.06
2844 3081 7.931578 AACATCTTTCAACCGGATGTATTTA 57.068 32.000 9.46 0.00 46.01 1.40
2857 3094 6.423001 CCGGATGTATTTAGTGTTTACTAGCC 59.577 42.308 0.00 0.00 40.33 3.93
2870 3107 7.012989 AGTGTTTACTAGCCGAATGTTTCTTTT 59.987 33.333 0.00 0.00 34.74 2.27
2955 3192 3.517296 TTGGATGCTGACCAAAAGGTA 57.483 42.857 0.00 0.00 43.22 3.08
2956 3193 3.737559 TGGATGCTGACCAAAAGGTAT 57.262 42.857 0.00 0.00 34.25 2.73
2957 3194 4.853468 TGGATGCTGACCAAAAGGTATA 57.147 40.909 0.00 0.00 34.25 1.47
2988 3225 6.867662 ATTACATTGCAAGACATACTAGCC 57.132 37.500 4.94 0.00 0.00 3.93
2996 3233 6.003950 TGCAAGACATACTAGCCTTTTTCTT 58.996 36.000 0.00 0.00 0.00 2.52
2998 3235 6.372937 GCAAGACATACTAGCCTTTTTCTTCT 59.627 38.462 0.00 0.00 0.00 2.85
3001 3238 8.926092 AGACATACTAGCCTTTTTCTTCTTTT 57.074 30.769 0.00 0.00 0.00 2.27
3012 3249 7.360353 GCCTTTTTCTTCTTTTGATTGTATGCC 60.360 37.037 0.00 0.00 0.00 4.40
3014 3251 4.355543 TCTTCTTTTGATTGTATGCCGC 57.644 40.909 0.00 0.00 0.00 6.53
3016 3253 2.441410 TCTTTTGATTGTATGCCGCCA 58.559 42.857 0.00 0.00 0.00 5.69
3027 3264 0.181114 ATGCCGCCAGCTGAAGATTA 59.819 50.000 17.39 0.00 44.23 1.75
3037 3274 5.583457 GCCAGCTGAAGATTAAAAATTGCAT 59.417 36.000 17.39 0.00 0.00 3.96
3038 3275 6.238022 GCCAGCTGAAGATTAAAAATTGCATC 60.238 38.462 17.39 0.00 0.00 3.91
3080 3319 2.158957 GGATACCTGCAAATGTCTCCGA 60.159 50.000 0.00 0.00 0.00 4.55
3113 3352 6.183360 GGCTTTAAAGACCGTAATAACCACTC 60.183 42.308 19.48 0.00 0.00 3.51
3117 3356 0.176449 ACCGTAATAACCACTCGCCC 59.824 55.000 0.00 0.00 0.00 6.13
3118 3357 0.462789 CCGTAATAACCACTCGCCCT 59.537 55.000 0.00 0.00 0.00 5.19
3120 3359 1.931172 CGTAATAACCACTCGCCCTTG 59.069 52.381 0.00 0.00 0.00 3.61
3121 3360 2.417651 CGTAATAACCACTCGCCCTTGA 60.418 50.000 0.00 0.00 0.00 3.02
3122 3361 2.403252 AATAACCACTCGCCCTTGAG 57.597 50.000 0.00 0.00 41.86 3.02
3123 3362 1.568504 ATAACCACTCGCCCTTGAGA 58.431 50.000 0.00 0.00 39.35 3.27
3124 3363 0.606604 TAACCACTCGCCCTTGAGAC 59.393 55.000 0.00 0.00 39.35 3.36
3125 3364 1.407656 AACCACTCGCCCTTGAGACA 61.408 55.000 0.00 0.00 39.35 3.41
3139 3379 6.375455 GCCCTTGAGACAAGATTTAGAAATCA 59.625 38.462 15.51 0.00 45.59 2.57
3141 3381 7.148171 CCCTTGAGACAAGATTTAGAAATCACC 60.148 40.741 15.51 3.80 45.59 4.02
3148 3388 9.118236 GACAAGATTTAGAAATCACCGAAAAAG 57.882 33.333 15.51 0.41 45.59 2.27
3153 3393 6.567687 TTAGAAATCACCGAAAAAGCATCA 57.432 33.333 0.00 0.00 0.00 3.07
3164 3404 3.863142 AAAAGCATCAGTTGGAGCATC 57.137 42.857 0.00 0.00 0.00 3.91
3165 3405 2.502142 AAGCATCAGTTGGAGCATCA 57.498 45.000 0.00 0.00 36.25 3.07
3166 3406 1.747709 AGCATCAGTTGGAGCATCAC 58.252 50.000 0.00 0.00 36.25 3.06
3167 3407 0.737219 GCATCAGTTGGAGCATCACC 59.263 55.000 0.00 0.00 36.25 4.02
3168 3408 1.386533 CATCAGTTGGAGCATCACCC 58.613 55.000 0.00 0.00 36.25 4.61
3169 3409 0.257039 ATCAGTTGGAGCATCACCCC 59.743 55.000 0.00 0.00 36.25 4.95
3170 3410 1.133181 TCAGTTGGAGCATCACCCCA 61.133 55.000 0.00 0.00 36.25 4.96
3171 3411 0.033796 CAGTTGGAGCATCACCCCAT 60.034 55.000 0.00 0.00 36.25 4.00
3172 3412 0.033796 AGTTGGAGCATCACCCCATG 60.034 55.000 0.00 0.00 36.25 3.66
3177 3417 3.710926 GCATCACCCCATGCCAAA 58.289 55.556 0.00 0.00 43.03 3.28
3178 3418 1.218854 GCATCACCCCATGCCAAAC 59.781 57.895 0.00 0.00 43.03 2.93
3179 3419 1.543065 GCATCACCCCATGCCAAACA 61.543 55.000 0.00 0.00 43.03 2.83
3180 3420 0.247185 CATCACCCCATGCCAAACAC 59.753 55.000 0.00 0.00 0.00 3.32
3181 3421 1.250154 ATCACCCCATGCCAAACACG 61.250 55.000 0.00 0.00 0.00 4.49
3182 3422 3.302344 ACCCCATGCCAAACACGC 61.302 61.111 0.00 0.00 0.00 5.34
3183 3423 2.990967 CCCCATGCCAAACACGCT 60.991 61.111 0.00 0.00 0.00 5.07
3184 3424 2.573083 CCCCATGCCAAACACGCTT 61.573 57.895 0.00 0.00 0.00 4.68
3185 3425 1.373246 CCCATGCCAAACACGCTTG 60.373 57.895 0.00 0.00 0.00 4.01
3186 3426 2.023223 CCATGCCAAACACGCTTGC 61.023 57.895 0.00 0.00 31.79 4.01
3187 3427 1.300003 CATGCCAAACACGCTTGCA 60.300 52.632 0.00 0.00 0.00 4.08
3188 3428 0.875040 CATGCCAAACACGCTTGCAA 60.875 50.000 0.00 0.00 0.00 4.08
3189 3429 0.033781 ATGCCAAACACGCTTGCAAT 59.966 45.000 0.00 0.00 0.00 3.56
3190 3430 0.179089 TGCCAAACACGCTTGCAATT 60.179 45.000 0.00 0.00 0.00 2.32
3191 3431 0.936600 GCCAAACACGCTTGCAATTT 59.063 45.000 0.00 0.00 0.00 1.82
3192 3432 2.131183 GCCAAACACGCTTGCAATTTA 58.869 42.857 0.00 0.00 0.00 1.40
3193 3433 2.736192 GCCAAACACGCTTGCAATTTAT 59.264 40.909 0.00 0.00 0.00 1.40
3194 3434 3.923461 GCCAAACACGCTTGCAATTTATA 59.077 39.130 0.00 0.00 0.00 0.98
3195 3435 4.566360 GCCAAACACGCTTGCAATTTATAT 59.434 37.500 0.00 0.00 0.00 0.86
3196 3436 5.276348 GCCAAACACGCTTGCAATTTATATC 60.276 40.000 0.00 0.00 0.00 1.63
3197 3437 6.035843 CCAAACACGCTTGCAATTTATATCT 58.964 36.000 0.00 0.00 0.00 1.98
3198 3438 7.192913 CCAAACACGCTTGCAATTTATATCTA 58.807 34.615 0.00 0.00 0.00 1.98
3199 3439 7.165812 CCAAACACGCTTGCAATTTATATCTAC 59.834 37.037 0.00 0.00 0.00 2.59
3200 3440 6.300354 ACACGCTTGCAATTTATATCTACC 57.700 37.500 0.00 0.00 0.00 3.18
3201 3441 5.050363 ACACGCTTGCAATTTATATCTACCG 60.050 40.000 0.00 0.00 0.00 4.02
3202 3442 4.451096 ACGCTTGCAATTTATATCTACCGG 59.549 41.667 0.00 0.00 0.00 5.28
3203 3443 4.451096 CGCTTGCAATTTATATCTACCGGT 59.549 41.667 13.98 13.98 0.00 5.28
3204 3444 5.389516 CGCTTGCAATTTATATCTACCGGTC 60.390 44.000 12.40 0.00 0.00 4.79
3205 3445 5.106673 GCTTGCAATTTATATCTACCGGTCC 60.107 44.000 12.40 0.00 0.00 4.46
3206 3446 5.554437 TGCAATTTATATCTACCGGTCCA 57.446 39.130 12.40 0.00 0.00 4.02
3207 3447 5.547465 TGCAATTTATATCTACCGGTCCAG 58.453 41.667 12.40 3.52 0.00 3.86
3208 3448 5.305902 TGCAATTTATATCTACCGGTCCAGA 59.694 40.000 12.40 10.62 0.00 3.86
3209 3449 6.183361 TGCAATTTATATCTACCGGTCCAGAA 60.183 38.462 12.40 0.95 0.00 3.02
3210 3450 6.369065 GCAATTTATATCTACCGGTCCAGAAG 59.631 42.308 12.40 1.60 0.00 2.85
3211 3451 6.607004 ATTTATATCTACCGGTCCAGAAGG 57.393 41.667 12.40 0.00 0.00 3.46
3212 3452 3.614568 ATATCTACCGGTCCAGAAGGT 57.385 47.619 12.40 0.00 41.73 3.50
3213 3453 2.249309 ATCTACCGGTCCAGAAGGTT 57.751 50.000 12.40 0.00 39.31 3.50
3214 3454 1.263356 TCTACCGGTCCAGAAGGTTG 58.737 55.000 12.40 1.33 39.31 3.77
3215 3455 0.249398 CTACCGGTCCAGAAGGTTGG 59.751 60.000 12.40 0.00 39.31 3.77
3216 3456 0.178926 TACCGGTCCAGAAGGTTGGA 60.179 55.000 12.40 0.00 44.84 3.53
3229 3469 3.644861 GTTGGAGAAACCGGACCAT 57.355 52.632 9.46 0.00 42.61 3.55
3230 3470 1.165270 GTTGGAGAAACCGGACCATG 58.835 55.000 9.46 0.00 42.61 3.66
3231 3471 0.608035 TTGGAGAAACCGGACCATGC 60.608 55.000 9.46 0.00 42.61 4.06
3232 3472 1.749258 GGAGAAACCGGACCATGCC 60.749 63.158 9.46 0.00 0.00 4.40
3239 3479 2.126502 CGGACCATGCCGCAAAAC 60.127 61.111 0.00 0.00 45.38 2.43
3240 3480 2.913765 CGGACCATGCCGCAAAACA 61.914 57.895 0.00 0.00 45.38 2.83
3241 3481 1.365633 GGACCATGCCGCAAAACAA 59.634 52.632 0.00 0.00 0.00 2.83
3242 3482 0.037419 GGACCATGCCGCAAAACAAT 60.037 50.000 0.00 0.00 0.00 2.71
3243 3483 1.349234 GACCATGCCGCAAAACAATC 58.651 50.000 0.00 0.00 0.00 2.67
3244 3484 0.388391 ACCATGCCGCAAAACAATCG 60.388 50.000 0.00 0.00 0.00 3.34
3245 3485 1.685640 CCATGCCGCAAAACAATCGC 61.686 55.000 0.00 0.00 0.00 4.58
3246 3486 1.007848 CATGCCGCAAAACAATCGCA 61.008 50.000 0.00 0.00 0.00 5.10
3247 3487 0.733566 ATGCCGCAAAACAATCGCAG 60.734 50.000 0.00 0.00 0.00 5.18
3248 3488 1.081509 GCCGCAAAACAATCGCAGA 60.082 52.632 0.00 0.00 45.75 4.26
3249 3489 0.662970 GCCGCAAAACAATCGCAGAA 60.663 50.000 0.00 0.00 43.58 3.02
3250 3490 1.330306 CCGCAAAACAATCGCAGAAG 58.670 50.000 0.00 0.00 43.58 2.85
3251 3491 1.069296 CCGCAAAACAATCGCAGAAGA 60.069 47.619 0.00 0.00 43.58 2.87
3252 3492 2.604373 CCGCAAAACAATCGCAGAAGAA 60.604 45.455 0.00 0.00 43.58 2.52
3253 3493 2.653584 CGCAAAACAATCGCAGAAGAAG 59.346 45.455 0.00 0.00 43.58 2.85
3254 3494 3.606846 CGCAAAACAATCGCAGAAGAAGA 60.607 43.478 0.00 0.00 43.58 2.87
3255 3495 4.479619 GCAAAACAATCGCAGAAGAAGAT 58.520 39.130 0.00 0.00 43.58 2.40
3256 3496 4.322804 GCAAAACAATCGCAGAAGAAGATG 59.677 41.667 0.00 0.00 43.58 2.90
3257 3497 3.754188 AACAATCGCAGAAGAAGATGC 57.246 42.857 0.00 0.00 43.58 3.91
3258 3498 2.983229 ACAATCGCAGAAGAAGATGCT 58.017 42.857 0.00 0.00 43.58 3.79
3259 3499 2.676839 ACAATCGCAGAAGAAGATGCTG 59.323 45.455 0.00 0.00 43.58 4.41
3260 3500 2.934553 CAATCGCAGAAGAAGATGCTGA 59.065 45.455 0.00 0.00 43.58 4.26
3261 3501 2.749280 TCGCAGAAGAAGATGCTGAA 57.251 45.000 0.00 0.00 40.34 3.02
3262 3502 2.614779 TCGCAGAAGAAGATGCTGAAG 58.385 47.619 0.00 0.00 40.34 3.02
3263 3503 2.028658 TCGCAGAAGAAGATGCTGAAGT 60.029 45.455 0.00 0.00 40.34 3.01
3264 3504 2.740981 CGCAGAAGAAGATGCTGAAGTT 59.259 45.455 0.00 0.00 40.34 2.66
3265 3505 3.424565 CGCAGAAGAAGATGCTGAAGTTG 60.425 47.826 0.00 0.00 40.34 3.16
3266 3506 3.670091 GCAGAAGAAGATGCTGAAGTTGC 60.670 47.826 0.00 0.00 39.38 4.17
3267 3507 3.080319 AGAAGAAGATGCTGAAGTTGCC 58.920 45.455 0.00 0.00 0.00 4.52
3268 3508 1.446907 AGAAGATGCTGAAGTTGCCG 58.553 50.000 0.00 0.00 0.00 5.69
3269 3509 0.179179 GAAGATGCTGAAGTTGCCGC 60.179 55.000 0.00 0.00 0.00 6.53
3270 3510 0.890542 AAGATGCTGAAGTTGCCGCA 60.891 50.000 0.00 0.00 36.75 5.69
3271 3511 1.154150 GATGCTGAAGTTGCCGCAC 60.154 57.895 0.00 0.00 34.93 5.34
3272 3512 2.533391 GATGCTGAAGTTGCCGCACC 62.533 60.000 0.00 0.00 34.93 5.01
3273 3513 3.286751 GCTGAAGTTGCCGCACCA 61.287 61.111 0.00 0.00 0.00 4.17
3274 3514 2.844451 GCTGAAGTTGCCGCACCAA 61.844 57.895 0.00 0.00 0.00 3.67
3275 3515 1.959085 CTGAAGTTGCCGCACCAAT 59.041 52.632 0.00 0.00 0.00 3.16
3276 3516 1.164411 CTGAAGTTGCCGCACCAATA 58.836 50.000 0.00 0.00 0.00 1.90
3277 3517 1.131126 CTGAAGTTGCCGCACCAATAG 59.869 52.381 0.00 0.00 0.00 1.73
3278 3518 1.165270 GAAGTTGCCGCACCAATAGT 58.835 50.000 0.00 0.00 0.00 2.12
3279 3519 1.130561 GAAGTTGCCGCACCAATAGTC 59.869 52.381 0.00 0.00 0.00 2.59
3280 3520 0.036164 AGTTGCCGCACCAATAGTCA 59.964 50.000 0.00 0.00 0.00 3.41
3281 3521 0.447801 GTTGCCGCACCAATAGTCAG 59.552 55.000 0.00 0.00 0.00 3.51
3282 3522 1.305219 TTGCCGCACCAATAGTCAGC 61.305 55.000 0.00 0.00 0.00 4.26
3283 3523 2.472909 GCCGCACCAATAGTCAGCC 61.473 63.158 0.00 0.00 0.00 4.85
3284 3524 1.078497 CCGCACCAATAGTCAGCCA 60.078 57.895 0.00 0.00 0.00 4.75
3285 3525 0.676466 CCGCACCAATAGTCAGCCAA 60.676 55.000 0.00 0.00 0.00 4.52
3286 3526 1.164411 CGCACCAATAGTCAGCCAAA 58.836 50.000 0.00 0.00 0.00 3.28
3287 3527 1.745087 CGCACCAATAGTCAGCCAAAT 59.255 47.619 0.00 0.00 0.00 2.32
3288 3528 2.478370 CGCACCAATAGTCAGCCAAATG 60.478 50.000 0.00 0.00 0.00 2.32
3289 3529 2.736400 GCACCAATAGTCAGCCAAATGC 60.736 50.000 0.00 0.00 41.71 3.56
3300 3540 2.935481 GCCAAATGCTCTCCTTGAAG 57.065 50.000 0.00 0.00 36.87 3.02
3301 3541 1.475682 GCCAAATGCTCTCCTTGAAGG 59.524 52.381 4.45 4.45 36.87 3.46
3302 3542 2.881403 GCCAAATGCTCTCCTTGAAGGA 60.881 50.000 14.16 14.16 38.52 3.36
3303 3543 2.751806 CCAAATGCTCTCCTTGAAGGAC 59.248 50.000 10.46 1.29 40.06 3.85
3304 3544 3.415212 CAAATGCTCTCCTTGAAGGACA 58.585 45.455 10.46 7.67 40.06 4.02
3305 3545 2.777832 ATGCTCTCCTTGAAGGACAC 57.222 50.000 10.46 3.20 40.06 3.67
3306 3546 1.423584 TGCTCTCCTTGAAGGACACA 58.576 50.000 10.46 5.93 40.06 3.72
3307 3547 1.070758 TGCTCTCCTTGAAGGACACAC 59.929 52.381 10.46 0.99 40.06 3.82
3308 3548 1.609320 GCTCTCCTTGAAGGACACACC 60.609 57.143 10.46 0.00 40.06 4.16
3309 3549 1.694150 CTCTCCTTGAAGGACACACCA 59.306 52.381 10.46 0.00 40.06 4.17
3310 3550 2.104792 CTCTCCTTGAAGGACACACCAA 59.895 50.000 10.46 0.00 40.06 3.67
3311 3551 2.711009 TCTCCTTGAAGGACACACCAAT 59.289 45.455 10.46 0.00 40.06 3.16
3312 3552 3.077359 CTCCTTGAAGGACACACCAATC 58.923 50.000 10.46 0.00 40.06 2.67
3313 3553 2.441375 TCCTTGAAGGACACACCAATCA 59.559 45.455 10.46 0.00 40.06 2.57
3314 3554 2.554032 CCTTGAAGGACACACCAATCAC 59.446 50.000 4.95 0.00 37.67 3.06
3315 3555 2.270352 TGAAGGACACACCAATCACC 57.730 50.000 0.00 0.00 42.04 4.02
3316 3556 1.492599 TGAAGGACACACCAATCACCA 59.507 47.619 0.00 0.00 42.04 4.17
3317 3557 2.092158 TGAAGGACACACCAATCACCAA 60.092 45.455 0.00 0.00 42.04 3.67
3318 3558 2.276732 AGGACACACCAATCACCAAG 57.723 50.000 0.00 0.00 42.04 3.61
3319 3559 1.774254 AGGACACACCAATCACCAAGA 59.226 47.619 0.00 0.00 42.04 3.02
3320 3560 2.376518 AGGACACACCAATCACCAAGAT 59.623 45.455 0.00 0.00 42.04 2.40
3322 3562 3.573967 GGACACACCAATCACCAAGATTT 59.426 43.478 0.00 0.00 44.48 2.17
3323 3563 4.549458 GACACACCAATCACCAAGATTTG 58.451 43.478 0.00 0.00 44.48 2.32
3324 3564 7.518600 GGACACACCAATCACCAAGATTTGG 62.519 48.000 6.30 6.30 44.48 3.28
3344 3584 1.151668 CGAGAGCCAACAGTTCTTGG 58.848 55.000 0.00 0.00 43.36 3.61
3345 3585 1.528129 GAGAGCCAACAGTTCTTGGG 58.472 55.000 0.30 0.00 41.12 4.12
3346 3586 1.072331 GAGAGCCAACAGTTCTTGGGA 59.928 52.381 0.30 0.00 41.12 4.37
3347 3587 1.202818 AGAGCCAACAGTTCTTGGGAC 60.203 52.381 0.30 0.00 41.12 4.46
3348 3588 0.550914 AGCCAACAGTTCTTGGGACA 59.449 50.000 0.30 0.00 41.12 4.02
3349 3589 0.668535 GCCAACAGTTCTTGGGACAC 59.331 55.000 0.30 0.00 41.12 3.67
3350 3590 2.021723 GCCAACAGTTCTTGGGACACA 61.022 52.381 0.30 0.00 41.12 3.72
3351 3591 2.374184 CCAACAGTTCTTGGGACACAA 58.626 47.619 0.00 0.00 39.29 3.33
3352 3592 2.757868 CCAACAGTTCTTGGGACACAAA 59.242 45.455 0.00 0.00 39.29 2.83
3353 3593 3.428862 CCAACAGTTCTTGGGACACAAAC 60.429 47.826 0.00 0.00 39.29 2.93
3354 3594 3.366052 ACAGTTCTTGGGACACAAACT 57.634 42.857 0.00 0.00 41.96 2.66
3355 3595 3.279434 ACAGTTCTTGGGACACAAACTC 58.721 45.455 0.00 0.00 40.10 3.01
3356 3596 3.054361 ACAGTTCTTGGGACACAAACTCT 60.054 43.478 0.00 0.00 40.10 3.24
3357 3597 3.561725 CAGTTCTTGGGACACAAACTCTC 59.438 47.826 0.00 0.00 40.10 3.20
3358 3598 3.199946 AGTTCTTGGGACACAAACTCTCA 59.800 43.478 0.00 0.00 38.46 3.27
3359 3599 4.137543 GTTCTTGGGACACAAACTCTCAT 58.862 43.478 0.00 0.00 39.29 2.90
3360 3600 5.071788 AGTTCTTGGGACACAAACTCTCATA 59.928 40.000 0.00 0.00 38.46 2.15
3361 3601 5.152623 TCTTGGGACACAAACTCTCATAG 57.847 43.478 0.00 0.00 39.29 2.23
3362 3602 3.981071 TGGGACACAAACTCTCATAGG 57.019 47.619 0.00 0.00 0.00 2.57
3363 3603 2.027192 TGGGACACAAACTCTCATAGGC 60.027 50.000 0.00 0.00 0.00 3.93
3364 3604 2.633488 GGACACAAACTCTCATAGGCC 58.367 52.381 0.00 0.00 0.00 5.19
3365 3605 2.633488 GACACAAACTCTCATAGGCCC 58.367 52.381 0.00 0.00 0.00 5.80
3366 3606 2.237392 GACACAAACTCTCATAGGCCCT 59.763 50.000 0.00 0.00 0.00 5.19
3367 3607 2.026822 ACACAAACTCTCATAGGCCCTG 60.027 50.000 0.00 0.00 0.00 4.45
3368 3608 2.026822 CACAAACTCTCATAGGCCCTGT 60.027 50.000 0.00 0.00 0.00 4.00
3369 3609 2.026822 ACAAACTCTCATAGGCCCTGTG 60.027 50.000 0.14 0.14 0.00 3.66
3370 3610 1.958288 AACTCTCATAGGCCCTGTGT 58.042 50.000 7.42 0.00 0.00 3.72
3371 3611 1.490574 ACTCTCATAGGCCCTGTGTC 58.509 55.000 7.42 0.00 0.00 3.67
3372 3612 0.387202 CTCTCATAGGCCCTGTGTCG 59.613 60.000 7.42 0.79 0.00 4.35
3373 3613 0.033503 TCTCATAGGCCCTGTGTCGA 60.034 55.000 7.42 3.14 0.00 4.20
3374 3614 1.043816 CTCATAGGCCCTGTGTCGAT 58.956 55.000 7.42 0.00 0.00 3.59
3375 3615 0.752658 TCATAGGCCCTGTGTCGATG 59.247 55.000 7.42 0.00 0.00 3.84
3376 3616 0.882042 CATAGGCCCTGTGTCGATGC 60.882 60.000 0.00 0.00 0.00 3.91
3377 3617 2.044806 ATAGGCCCTGTGTCGATGCC 62.045 60.000 0.00 0.00 42.48 4.40
3378 3618 4.408821 GGCCCTGTGTCGATGCCA 62.409 66.667 0.00 0.00 41.76 4.92
3379 3619 2.359850 GCCCTGTGTCGATGCCAA 60.360 61.111 0.00 0.00 0.00 4.52
3380 3620 1.971167 GCCCTGTGTCGATGCCAAA 60.971 57.895 0.00 0.00 0.00 3.28
3381 3621 1.315257 GCCCTGTGTCGATGCCAAAT 61.315 55.000 0.00 0.00 0.00 2.32
3382 3622 0.734889 CCCTGTGTCGATGCCAAATC 59.265 55.000 0.00 0.00 0.00 2.17
3383 3623 1.679944 CCCTGTGTCGATGCCAAATCT 60.680 52.381 0.00 0.00 0.00 2.40
3384 3624 2.419990 CCCTGTGTCGATGCCAAATCTA 60.420 50.000 0.00 0.00 0.00 1.98
3385 3625 3.270027 CCTGTGTCGATGCCAAATCTAA 58.730 45.455 0.00 0.00 0.00 2.10
3386 3626 3.879295 CCTGTGTCGATGCCAAATCTAAT 59.121 43.478 0.00 0.00 0.00 1.73
3387 3627 4.260907 CCTGTGTCGATGCCAAATCTAATG 60.261 45.833 0.00 0.00 0.00 1.90
3388 3628 4.260985 TGTGTCGATGCCAAATCTAATGT 58.739 39.130 0.00 0.00 0.00 2.71
3389 3629 4.332543 TGTGTCGATGCCAAATCTAATGTC 59.667 41.667 0.00 0.00 0.00 3.06
3390 3630 4.332543 GTGTCGATGCCAAATCTAATGTCA 59.667 41.667 0.00 0.00 0.00 3.58
3391 3631 5.008019 GTGTCGATGCCAAATCTAATGTCAT 59.992 40.000 0.00 0.00 0.00 3.06
3392 3632 5.237127 TGTCGATGCCAAATCTAATGTCATC 59.763 40.000 0.00 0.00 0.00 2.92
3393 3633 4.705492 CGATGCCAAATCTAATGTCATCG 58.295 43.478 5.71 5.71 43.32 3.84
3394 3634 5.929697 GATGCCAAATCTAATGTCATCGA 57.070 39.130 0.00 0.00 0.00 3.59
3395 3635 6.492007 GATGCCAAATCTAATGTCATCGAT 57.508 37.500 0.00 0.00 0.00 3.59
3396 3636 5.678132 TGCCAAATCTAATGTCATCGATG 57.322 39.130 19.61 19.61 0.00 3.84
3397 3637 5.125356 TGCCAAATCTAATGTCATCGATGT 58.875 37.500 24.09 8.32 0.00 3.06
3398 3638 6.287525 TGCCAAATCTAATGTCATCGATGTA 58.712 36.000 24.09 15.12 0.00 2.29
3399 3639 6.424812 TGCCAAATCTAATGTCATCGATGTAG 59.575 38.462 24.09 17.51 0.00 2.74
3400 3640 6.128445 GCCAAATCTAATGTCATCGATGTAGG 60.128 42.308 24.09 9.58 0.00 3.18
3401 3641 6.369890 CCAAATCTAATGTCATCGATGTAGGG 59.630 42.308 24.09 11.01 0.00 3.53
3402 3642 6.918067 AATCTAATGTCATCGATGTAGGGA 57.082 37.500 24.09 15.39 0.00 4.20
3403 3643 5.966742 TCTAATGTCATCGATGTAGGGAG 57.033 43.478 24.09 16.39 0.00 4.30
3404 3644 5.631119 TCTAATGTCATCGATGTAGGGAGA 58.369 41.667 24.09 18.12 0.00 3.71
3405 3645 4.862902 AATGTCATCGATGTAGGGAGAG 57.137 45.455 24.09 0.00 0.00 3.20
3406 3646 2.587522 TGTCATCGATGTAGGGAGAGG 58.412 52.381 24.09 0.00 0.00 3.69
3407 3647 1.271102 GTCATCGATGTAGGGAGAGGC 59.729 57.143 24.09 0.00 0.00 4.70
3408 3648 0.605589 CATCGATGTAGGGAGAGGCC 59.394 60.000 17.50 0.00 0.00 5.19
3409 3649 0.896019 ATCGATGTAGGGAGAGGCCG 60.896 60.000 0.00 0.00 37.63 6.13
3410 3650 1.528542 CGATGTAGGGAGAGGCCGA 60.529 63.158 0.00 0.00 37.63 5.54
3411 3651 1.519751 CGATGTAGGGAGAGGCCGAG 61.520 65.000 0.00 0.00 37.63 4.63
3412 3652 0.178987 GATGTAGGGAGAGGCCGAGA 60.179 60.000 0.00 0.00 37.63 4.04
3413 3653 0.468400 ATGTAGGGAGAGGCCGAGAC 60.468 60.000 0.00 0.00 37.63 3.36
3414 3654 1.829096 GTAGGGAGAGGCCGAGACC 60.829 68.421 0.00 0.00 37.63 3.85
3415 3655 2.007568 TAGGGAGAGGCCGAGACCT 61.008 63.158 14.91 14.91 45.04 3.85
3416 3656 1.581923 TAGGGAGAGGCCGAGACCTT 61.582 60.000 15.59 8.78 41.32 3.50
3417 3657 1.076192 GGGAGAGGCCGAGACCTTA 60.076 63.158 0.00 0.00 41.32 2.69
3418 3658 0.470268 GGGAGAGGCCGAGACCTTAT 60.470 60.000 0.00 0.00 41.32 1.73
3419 3659 1.415200 GGAGAGGCCGAGACCTTATT 58.585 55.000 0.00 0.00 41.32 1.40
3420 3660 1.341852 GGAGAGGCCGAGACCTTATTC 59.658 57.143 0.00 0.00 41.32 1.75
3421 3661 1.341852 GAGAGGCCGAGACCTTATTCC 59.658 57.143 0.00 0.00 41.32 3.01
3422 3662 1.120530 GAGGCCGAGACCTTATTCCA 58.879 55.000 0.00 0.00 41.32 3.53
3423 3663 1.485066 GAGGCCGAGACCTTATTCCAA 59.515 52.381 0.00 0.00 41.32 3.53
3424 3664 1.209747 AGGCCGAGACCTTATTCCAAC 59.790 52.381 0.00 0.00 36.28 3.77
3425 3665 1.065709 GGCCGAGACCTTATTCCAACA 60.066 52.381 0.00 0.00 0.00 3.33
3426 3666 2.421529 GGCCGAGACCTTATTCCAACAT 60.422 50.000 0.00 0.00 0.00 2.71
3427 3667 2.614057 GCCGAGACCTTATTCCAACATG 59.386 50.000 0.00 0.00 0.00 3.21
3428 3668 2.614057 CCGAGACCTTATTCCAACATGC 59.386 50.000 0.00 0.00 0.00 4.06
3429 3669 2.614057 CGAGACCTTATTCCAACATGCC 59.386 50.000 0.00 0.00 0.00 4.40
3430 3670 3.620488 GAGACCTTATTCCAACATGCCA 58.380 45.455 0.00 0.00 0.00 4.92
3431 3671 4.210331 GAGACCTTATTCCAACATGCCAT 58.790 43.478 0.00 0.00 0.00 4.40
3432 3672 5.376625 GAGACCTTATTCCAACATGCCATA 58.623 41.667 0.00 0.00 0.00 2.74
3433 3673 5.380043 AGACCTTATTCCAACATGCCATAG 58.620 41.667 0.00 0.00 0.00 2.23
3434 3674 3.891366 ACCTTATTCCAACATGCCATAGC 59.109 43.478 0.00 0.00 40.48 2.97
3435 3675 3.256631 CCTTATTCCAACATGCCATAGCC 59.743 47.826 0.00 0.00 38.69 3.93
3436 3676 2.761786 ATTCCAACATGCCATAGCCT 57.238 45.000 0.00 0.00 38.69 4.58
3437 3677 1.766494 TTCCAACATGCCATAGCCTG 58.234 50.000 0.00 0.00 40.18 4.85
3438 3678 0.752743 TCCAACATGCCATAGCCTGC 60.753 55.000 0.00 0.00 38.10 4.85
3439 3679 1.038681 CCAACATGCCATAGCCTGCA 61.039 55.000 0.00 0.00 38.10 4.41
3440 3680 0.101759 CAACATGCCATAGCCTGCAC 59.898 55.000 0.00 0.00 40.88 4.57
3441 3681 0.033796 AACATGCCATAGCCTGCACT 60.034 50.000 0.00 0.00 40.88 4.40
3442 3682 0.839277 ACATGCCATAGCCTGCACTA 59.161 50.000 0.00 0.00 40.88 2.74
3443 3683 1.233019 CATGCCATAGCCTGCACTAC 58.767 55.000 0.00 0.00 40.88 2.73
3444 3684 0.109342 ATGCCATAGCCTGCACTACC 59.891 55.000 0.00 0.00 40.88 3.18
3445 3685 0.982852 TGCCATAGCCTGCACTACCT 60.983 55.000 0.00 0.00 38.69 3.08
3446 3686 1.048601 GCCATAGCCTGCACTACCTA 58.951 55.000 0.00 0.00 0.00 3.08
3447 3687 1.001406 GCCATAGCCTGCACTACCTAG 59.999 57.143 0.00 0.00 0.00 3.02
3448 3688 2.320781 CCATAGCCTGCACTACCTAGT 58.679 52.381 0.00 0.00 36.90 2.57
3449 3689 2.700897 CCATAGCCTGCACTACCTAGTT 59.299 50.000 0.00 0.00 33.46 2.24
3450 3690 3.493350 CCATAGCCTGCACTACCTAGTTG 60.493 52.174 0.00 0.00 33.46 3.16
3451 3691 1.938585 AGCCTGCACTACCTAGTTGA 58.061 50.000 0.00 0.00 33.46 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 0.453950 CTCAACGAGTACACCGGACG 60.454 60.000 9.46 0.00 0.00 4.79
15 16 4.082245 TGCATCTCAATCTCAACGAGTACA 60.082 41.667 0.00 0.00 0.00 2.90
69 70 9.937175 CTGAAACTTTATATCTTTCCCGATTTC 57.063 33.333 0.00 0.00 0.00 2.17
70 71 9.681062 TCTGAAACTTTATATCTTTCCCGATTT 57.319 29.630 0.00 0.00 0.00 2.17
71 72 9.331282 CTCTGAAACTTTATATCTTTCCCGATT 57.669 33.333 0.00 0.00 0.00 3.34
73 74 7.980099 GTCTCTGAAACTTTATATCTTTCCCGA 59.020 37.037 0.00 0.00 0.00 5.14
74 75 7.224949 GGTCTCTGAAACTTTATATCTTTCCCG 59.775 40.741 0.00 0.00 0.00 5.14
75 76 8.268605 AGGTCTCTGAAACTTTATATCTTTCCC 58.731 37.037 0.00 0.00 0.00 3.97
78 79 8.951243 GCAAGGTCTCTGAAACTTTATATCTTT 58.049 33.333 0.00 0.00 0.00 2.52
99 104 0.680921 ACACCAATGATCCGGCAAGG 60.681 55.000 0.00 0.00 42.97 3.61
107 112 3.043586 CTCGCGTACTACACCAATGATC 58.956 50.000 5.77 0.00 0.00 2.92
114 119 5.727239 GCAGATATATCTCGCGTACTACACC 60.727 48.000 12.50 0.00 34.22 4.16
124 129 5.067153 AGAGGTACATGCAGATATATCTCGC 59.933 44.000 20.96 20.96 34.22 5.03
250 273 0.319297 CTCTGCAGCTTTTGGGCAAC 60.319 55.000 9.47 0.00 37.06 4.17
434 473 4.141436 TGGGTACTCCTCCTTTTCGAAAAA 60.141 41.667 22.67 9.49 36.20 1.94
435 474 3.391955 TGGGTACTCCTCCTTTTCGAAAA 59.608 43.478 21.35 21.35 36.20 2.29
436 475 2.974099 TGGGTACTCCTCCTTTTCGAAA 59.026 45.455 6.47 6.47 36.20 3.46
437 476 2.612000 TGGGTACTCCTCCTTTTCGAA 58.388 47.619 0.00 0.00 36.20 3.71
438 477 2.314071 TGGGTACTCCTCCTTTTCGA 57.686 50.000 0.00 0.00 36.20 3.71
439 478 2.500098 TGATGGGTACTCCTCCTTTTCG 59.500 50.000 0.00 0.00 36.20 3.46
440 479 4.518249 CTTGATGGGTACTCCTCCTTTTC 58.482 47.826 0.00 0.00 36.20 2.29
441 480 3.308473 GCTTGATGGGTACTCCTCCTTTT 60.308 47.826 0.00 0.00 36.20 2.27
442 481 2.239907 GCTTGATGGGTACTCCTCCTTT 59.760 50.000 0.00 0.00 36.20 3.11
443 482 1.840635 GCTTGATGGGTACTCCTCCTT 59.159 52.381 0.00 0.00 36.20 3.36
444 483 1.501582 GCTTGATGGGTACTCCTCCT 58.498 55.000 0.00 0.00 36.20 3.69
445 484 0.105039 CGCTTGATGGGTACTCCTCC 59.895 60.000 0.00 0.00 36.20 4.30
446 485 1.112113 TCGCTTGATGGGTACTCCTC 58.888 55.000 0.00 0.00 36.20 3.71
447 486 1.414181 CATCGCTTGATGGGTACTCCT 59.586 52.381 0.00 0.00 44.74 3.69
448 487 1.871080 CATCGCTTGATGGGTACTCC 58.129 55.000 0.00 0.00 44.74 3.85
457 496 1.233019 GGCTGTATGCATCGCTTGAT 58.767 50.000 0.19 0.00 45.15 2.57
458 497 0.107752 TGGCTGTATGCATCGCTTGA 60.108 50.000 0.19 0.00 45.15 3.02
459 498 0.949397 ATGGCTGTATGCATCGCTTG 59.051 50.000 0.19 0.00 45.15 4.01
460 499 0.949397 CATGGCTGTATGCATCGCTT 59.051 50.000 0.19 0.00 45.15 4.68
461 500 0.107268 TCATGGCTGTATGCATCGCT 59.893 50.000 0.19 0.00 45.15 4.93
462 501 0.946528 TTCATGGCTGTATGCATCGC 59.053 50.000 0.19 4.61 45.15 4.58
463 502 3.251487 TGATTTCATGGCTGTATGCATCG 59.749 43.478 0.19 0.00 45.15 3.84
464 503 4.841443 TGATTTCATGGCTGTATGCATC 57.159 40.909 0.19 0.00 45.15 3.91
465 504 6.904463 TTATGATTTCATGGCTGTATGCAT 57.096 33.333 3.79 3.79 39.47 3.96
466 505 6.683715 CATTATGATTTCATGGCTGTATGCA 58.316 36.000 3.30 0.00 39.47 3.96
467 506 5.575606 GCATTATGATTTCATGGCTGTATGC 59.424 40.000 3.30 0.00 37.15 3.14
468 507 6.097356 GGCATTATGATTTCATGGCTGTATG 58.903 40.000 3.30 0.00 39.71 2.39
469 508 5.106038 CGGCATTATGATTTCATGGCTGTAT 60.106 40.000 3.30 0.00 40.45 2.29
470 509 4.216042 CGGCATTATGATTTCATGGCTGTA 59.784 41.667 3.30 0.00 40.45 2.74
471 510 3.005050 CGGCATTATGATTTCATGGCTGT 59.995 43.478 3.30 0.00 40.45 4.40
472 511 3.253921 TCGGCATTATGATTTCATGGCTG 59.746 43.478 3.30 9.00 40.45 4.85
473 512 3.489355 TCGGCATTATGATTTCATGGCT 58.511 40.909 3.30 0.00 40.45 4.75
474 513 3.921119 TCGGCATTATGATTTCATGGC 57.079 42.857 3.30 4.66 39.50 4.40
475 514 5.632244 TCATCGGCATTATGATTTCATGG 57.368 39.130 3.30 0.00 37.15 3.66
476 515 5.093457 GCTCATCGGCATTATGATTTCATG 58.907 41.667 3.30 0.00 37.15 3.07
477 516 4.142752 CGCTCATCGGCATTATGATTTCAT 60.143 41.667 0.00 0.00 33.08 2.57
478 517 3.187022 CGCTCATCGGCATTATGATTTCA 59.813 43.478 0.00 0.00 33.08 2.69
538 613 4.940046 CCTCTTCACGGTTACTACTACTGA 59.060 45.833 0.00 0.00 0.00 3.41
541 616 4.265073 TCCCTCTTCACGGTTACTACTAC 58.735 47.826 0.00 0.00 0.00 2.73
542 617 4.521146 CTCCCTCTTCACGGTTACTACTA 58.479 47.826 0.00 0.00 0.00 1.82
543 618 3.354467 CTCCCTCTTCACGGTTACTACT 58.646 50.000 0.00 0.00 0.00 2.57
544 619 2.426381 CCTCCCTCTTCACGGTTACTAC 59.574 54.545 0.00 0.00 0.00 2.73
563 638 1.128188 AGCTCCCGGTGTTCTTTCCT 61.128 55.000 0.00 0.00 0.00 3.36
564 639 0.673956 GAGCTCCCGGTGTTCTTTCC 60.674 60.000 0.87 0.00 0.00 3.13
565 640 0.673956 GGAGCTCCCGGTGTTCTTTC 60.674 60.000 23.19 0.00 0.00 2.62
566 641 1.128188 AGGAGCTCCCGGTGTTCTTT 61.128 55.000 29.54 3.28 40.87 2.52
568 643 1.985116 GAGGAGCTCCCGGTGTTCT 60.985 63.158 29.54 7.98 40.87 3.01
569 644 2.579738 GAGGAGCTCCCGGTGTTC 59.420 66.667 29.54 15.18 40.87 3.18
570 645 3.382832 CGAGGAGCTCCCGGTGTT 61.383 66.667 29.54 9.67 40.87 3.32
581 656 2.887889 CGAGGTAGCGAGCGAGGAG 61.888 68.421 0.00 0.00 0.00 3.69
582 657 2.895865 CGAGGTAGCGAGCGAGGA 60.896 66.667 0.00 0.00 0.00 3.71
583 658 3.955101 CCGAGGTAGCGAGCGAGG 61.955 72.222 6.48 0.00 0.00 4.63
584 659 3.203412 ACCGAGGTAGCGAGCGAG 61.203 66.667 0.00 0.00 0.00 5.03
585 660 3.506096 CACCGAGGTAGCGAGCGA 61.506 66.667 0.00 0.00 0.00 4.93
587 662 4.129737 TGCACCGAGGTAGCGAGC 62.130 66.667 0.00 0.00 34.36 5.03
588 663 2.103143 CTGCACCGAGGTAGCGAG 59.897 66.667 0.00 0.00 0.00 5.03
589 664 2.675423 ACTGCACCGAGGTAGCGA 60.675 61.111 0.00 0.00 0.00 4.93
590 665 2.202623 GACTGCACCGAGGTAGCG 60.203 66.667 0.00 1.83 0.00 4.26
591 666 1.153745 CTGACTGCACCGAGGTAGC 60.154 63.158 0.00 2.29 0.00 3.58
592 667 0.171455 GACTGACTGCACCGAGGTAG 59.829 60.000 0.00 0.00 0.00 3.18
593 668 0.538746 TGACTGACTGCACCGAGGTA 60.539 55.000 0.00 0.00 0.00 3.08
594 669 1.399744 TTGACTGACTGCACCGAGGT 61.400 55.000 0.00 0.00 0.00 3.85
595 670 0.946221 GTTGACTGACTGCACCGAGG 60.946 60.000 0.00 0.00 0.00 4.63
596 671 0.249447 TGTTGACTGACTGCACCGAG 60.249 55.000 0.00 0.00 0.00 4.63
597 672 0.249447 CTGTTGACTGACTGCACCGA 60.249 55.000 0.00 0.00 0.00 4.69
598 673 1.835483 GCTGTTGACTGACTGCACCG 61.835 60.000 2.63 0.00 42.10 4.94
599 674 1.835483 CGCTGTTGACTGACTGCACC 61.835 60.000 7.47 0.00 42.48 5.01
600 675 1.566563 CGCTGTTGACTGACTGCAC 59.433 57.895 7.47 0.00 42.48 4.57
601 676 2.246739 GCGCTGTTGACTGACTGCA 61.247 57.895 0.00 0.00 42.48 4.41
602 677 1.775039 TTGCGCTGTTGACTGACTGC 61.775 55.000 9.73 0.00 40.00 4.40
603 678 0.041839 GTTGCGCTGTTGACTGACTG 60.042 55.000 9.73 0.00 0.00 3.51
604 679 1.160329 GGTTGCGCTGTTGACTGACT 61.160 55.000 9.73 0.00 0.00 3.41
605 680 1.279840 GGTTGCGCTGTTGACTGAC 59.720 57.895 9.73 0.00 0.00 3.51
606 681 0.746204 TTGGTTGCGCTGTTGACTGA 60.746 50.000 9.73 0.00 0.00 3.41
663 747 1.608717 CCTCCCTCCTCGTGTCCTTG 61.609 65.000 0.00 0.00 0.00 3.61
664 748 1.305381 CCTCCCTCCTCGTGTCCTT 60.305 63.158 0.00 0.00 0.00 3.36
665 749 2.360980 CCTCCCTCCTCGTGTCCT 59.639 66.667 0.00 0.00 0.00 3.85
666 750 2.760385 CCCTCCCTCCTCGTGTCC 60.760 72.222 0.00 0.00 0.00 4.02
667 751 1.755008 CTCCCTCCCTCCTCGTGTC 60.755 68.421 0.00 0.00 0.00 3.67
668 752 2.360980 CTCCCTCCCTCCTCGTGT 59.639 66.667 0.00 0.00 0.00 4.49
670 754 3.756783 CCCTCCCTCCCTCCTCGT 61.757 72.222 0.00 0.00 0.00 4.18
671 755 3.430497 TCCCTCCCTCCCTCCTCG 61.430 72.222 0.00 0.00 0.00 4.63
674 758 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
675 759 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
676 760 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
678 762 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
679 763 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
680 764 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
681 765 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
682 766 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
683 767 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
684 768 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
685 769 4.179599 CCTCCCTCCCTCCCTCCC 62.180 77.778 0.00 0.00 0.00 4.30
686 770 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
687 771 3.036959 TCCCTCCCTCCCTCCCTC 61.037 72.222 0.00 0.00 0.00 4.30
688 772 3.039526 CTCCCTCCCTCCCTCCCT 61.040 72.222 0.00 0.00 0.00 4.20
689 773 4.890306 GCTCCCTCCCTCCCTCCC 62.890 77.778 0.00 0.00 0.00 4.30
765 849 0.958822 GAGGAGAGGAGGAATCTCGC 59.041 60.000 0.00 0.00 43.45 5.03
766 850 2.229792 CTGAGGAGAGGAGGAATCTCG 58.770 57.143 0.00 0.00 43.45 4.04
767 851 1.963515 GCTGAGGAGAGGAGGAATCTC 59.036 57.143 0.00 0.00 42.08 2.75
768 852 1.412937 GGCTGAGGAGAGGAGGAATCT 60.413 57.143 0.00 0.00 0.00 2.40
769 853 1.047801 GGCTGAGGAGAGGAGGAATC 58.952 60.000 0.00 0.00 0.00 2.52
770 854 0.399806 GGGCTGAGGAGAGGAGGAAT 60.400 60.000 0.00 0.00 0.00 3.01
771 855 1.002274 GGGCTGAGGAGAGGAGGAA 59.998 63.158 0.00 0.00 0.00 3.36
773 857 2.445654 GGGGCTGAGGAGAGGAGG 60.446 72.222 0.00 0.00 0.00 4.30
774 858 2.837291 CGGGGCTGAGGAGAGGAG 60.837 72.222 0.00 0.00 0.00 3.69
851 935 3.388703 CTCCCTCCTCTGCTGCTGC 62.389 68.421 8.89 8.89 40.20 5.25
854 938 3.478274 CCCTCCCTCCTCTGCTGC 61.478 72.222 0.00 0.00 0.00 5.25
856 940 2.040278 CACCCTCCCTCCTCTGCT 59.960 66.667 0.00 0.00 0.00 4.24
860 944 0.686112 CTCACTCACCCTCCCTCCTC 60.686 65.000 0.00 0.00 0.00 3.71
861 945 1.149782 TCTCACTCACCCTCCCTCCT 61.150 60.000 0.00 0.00 0.00 3.69
911 1034 4.047059 TCGCCCACCGAACGAGAC 62.047 66.667 0.00 0.00 44.21 3.36
947 1074 2.421424 CGAGGAAAAAGATCAAGCTGGG 59.579 50.000 0.00 0.00 0.00 4.45
952 1079 4.268884 GGTCGATCGAGGAAAAAGATCAAG 59.731 45.833 20.09 0.00 40.39 3.02
1068 1195 0.460987 CCAGGTTCAGCATCGACTCC 60.461 60.000 0.00 0.00 0.00 3.85
1261 1388 2.036992 CGCTGCTGGAAGAGAGGATTAT 59.963 50.000 0.00 0.00 34.07 1.28
1263 1390 0.177604 CGCTGCTGGAAGAGAGGATT 59.822 55.000 0.00 0.00 34.07 3.01
1306 1437 4.614036 GTTGGGTGGGGTGGGGTG 62.614 72.222 0.00 0.00 0.00 4.61
1308 1439 3.172926 ATTGTTGGGTGGGGTGGGG 62.173 63.158 0.00 0.00 0.00 4.96
1327 1458 4.148825 CTTCCTCTGTCCCGCCCG 62.149 72.222 0.00 0.00 0.00 6.13
1419 1578 4.644685 CACTTTTCTCCCAGGAAGAAACAA 59.355 41.667 0.00 0.00 32.18 2.83
1422 1581 4.788925 TCACTTTTCTCCCAGGAAGAAA 57.211 40.909 0.00 0.00 0.00 2.52
1680 1846 3.070159 TCATGGCTCATAGCAGAGGTTAC 59.930 47.826 0.78 0.00 44.75 2.50
1686 1852 5.557576 AGTTATTCATGGCTCATAGCAGA 57.442 39.130 0.78 0.00 44.75 4.26
1737 1903 5.409520 TGATCTGAATTTCAGGTTCTCGTTG 59.590 40.000 22.86 0.00 44.39 4.10
1760 1926 0.320596 ATTGCGGCATTGGTTGGTTG 60.321 50.000 2.28 0.00 0.00 3.77
1761 1927 0.037419 GATTGCGGCATTGGTTGGTT 60.037 50.000 2.28 0.00 0.00 3.67
1762 1928 0.899717 AGATTGCGGCATTGGTTGGT 60.900 50.000 2.28 0.00 0.00 3.67
1763 1929 0.458889 CAGATTGCGGCATTGGTTGG 60.459 55.000 2.28 0.00 0.00 3.77
1775 1941 2.410774 GCGATCGTATTCTGCAGATTGC 60.411 50.000 19.04 16.31 45.29 3.56
1802 1968 2.158534 AGTATTTGGCCAGTGTGGTGAA 60.159 45.455 5.11 0.00 40.46 3.18
1829 1995 7.335924 TGGCTGTGTTTAGAAGTGGTTATATTC 59.664 37.037 0.00 0.00 0.00 1.75
1915 2107 4.080413 CGGGTAGGTTTTATTGGGGTAAGA 60.080 45.833 0.00 0.00 0.00 2.10
1917 2109 3.848975 TCGGGTAGGTTTTATTGGGGTAA 59.151 43.478 0.00 0.00 0.00 2.85
1918 2110 3.455543 CTCGGGTAGGTTTTATTGGGGTA 59.544 47.826 0.00 0.00 0.00 3.69
1919 2111 2.240414 CTCGGGTAGGTTTTATTGGGGT 59.760 50.000 0.00 0.00 0.00 4.95
1920 2112 2.240414 ACTCGGGTAGGTTTTATTGGGG 59.760 50.000 0.00 0.00 0.00 4.96
1921 2113 3.639672 ACTCGGGTAGGTTTTATTGGG 57.360 47.619 0.00 0.00 0.00 4.12
1922 2114 7.052248 AGAAATACTCGGGTAGGTTTTATTGG 58.948 38.462 0.00 0.00 0.00 3.16
1923 2115 9.257651 CTAGAAATACTCGGGTAGGTTTTATTG 57.742 37.037 0.00 0.00 0.00 1.90
1926 2118 7.125391 TCCTAGAAATACTCGGGTAGGTTTTA 58.875 38.462 0.00 0.00 33.00 1.52
1928 2120 5.522641 TCCTAGAAATACTCGGGTAGGTTT 58.477 41.667 0.00 0.00 33.00 3.27
1929 2121 5.134725 TCCTAGAAATACTCGGGTAGGTT 57.865 43.478 0.00 0.00 33.00 3.50
1930 2122 4.447470 CCTCCTAGAAATACTCGGGTAGGT 60.447 50.000 0.00 0.00 33.00 3.08
1931 2123 4.080687 CCTCCTAGAAATACTCGGGTAGG 58.919 52.174 0.00 0.00 33.00 3.18
1932 2124 3.506844 GCCTCCTAGAAATACTCGGGTAG 59.493 52.174 0.00 0.00 33.00 3.18
1933 2125 3.494332 GCCTCCTAGAAATACTCGGGTA 58.506 50.000 0.00 0.00 33.00 3.69
1981 2173 6.868339 ACGTTATACCTTTGTACCTTGTACAC 59.132 38.462 6.58 0.00 0.00 2.90
1998 2190 7.173863 AGCAATGCACAATACTACGTTATAC 57.826 36.000 8.35 0.00 0.00 1.47
2008 2200 2.785477 GCGATGAAGCAATGCACAATAC 59.215 45.455 8.35 3.47 37.05 1.89
2010 2202 1.470285 GGCGATGAAGCAATGCACAAT 60.470 47.619 8.35 0.00 39.27 2.71
2011 2203 0.109179 GGCGATGAAGCAATGCACAA 60.109 50.000 8.35 0.00 39.27 3.33
2012 2204 0.961857 AGGCGATGAAGCAATGCACA 60.962 50.000 8.35 7.82 39.27 4.57
2013 2205 0.248377 GAGGCGATGAAGCAATGCAC 60.248 55.000 8.35 1.42 39.27 4.57
2014 2206 1.378882 GGAGGCGATGAAGCAATGCA 61.379 55.000 8.35 0.00 39.27 3.96
2015 2207 1.358046 GGAGGCGATGAAGCAATGC 59.642 57.895 0.00 0.00 39.27 3.56
2016 2208 0.661552 CTGGAGGCGATGAAGCAATG 59.338 55.000 0.00 0.00 39.27 2.82
2039 2231 2.602257 TCGGCTGGATATCACAACTG 57.398 50.000 4.83 1.71 0.00 3.16
2068 2260 4.491676 GAACATGAACAGCTCGGTTAGTA 58.508 43.478 0.00 0.00 0.00 1.82
2069 2261 3.326747 GAACATGAACAGCTCGGTTAGT 58.673 45.455 0.00 0.00 0.00 2.24
2091 2283 3.325753 AGCTCCACCTGACCCTGC 61.326 66.667 0.00 0.00 0.00 4.85
2118 2310 3.325716 TGAGGTTGTACTTACAAGACCCC 59.674 47.826 1.96 1.03 45.82 4.95
2211 2403 0.250727 TGGTGTTGAGGCTAAGCACC 60.251 55.000 26.52 26.52 46.97 5.01
2277 2469 3.807553 CAGGCAAAAATTGTGAGGGTTT 58.192 40.909 0.00 0.00 0.00 3.27
2278 2470 2.485302 GCAGGCAAAAATTGTGAGGGTT 60.485 45.455 0.00 0.00 0.00 4.11
2279 2471 1.070601 GCAGGCAAAAATTGTGAGGGT 59.929 47.619 0.00 0.00 0.00 4.34
2502 2722 8.873186 ATGCATTTCCACAGAATCATATATGA 57.127 30.769 17.56 17.56 41.70 2.15
2546 2766 3.131396 CACACCACGCTAGACTTCTTTT 58.869 45.455 0.00 0.00 0.00 2.27
2553 2773 0.388649 CAGACCACACCACGCTAGAC 60.389 60.000 0.00 0.00 0.00 2.59
2564 2784 1.924731 CTCTCCCTACACAGACCACA 58.075 55.000 0.00 0.00 0.00 4.17
2769 3003 2.048603 GGGAGGCAATGTCACTGGC 61.049 63.158 0.00 0.00 39.56 4.85
2779 3013 1.067000 CATTGCAATTTCGGGAGGCAA 60.067 47.619 9.83 0.00 46.95 4.52
2844 3081 5.548406 AGAAACATTCGGCTAGTAAACACT 58.452 37.500 0.00 0.00 34.02 3.55
2857 3094 6.954944 TGGTGTCTCTTAAAAGAAACATTCG 58.045 36.000 1.58 0.00 38.19 3.34
2882 3119 8.990163 TTTCCTTAATAAATATCAGACACCCC 57.010 34.615 0.00 0.00 0.00 4.95
2920 3157 6.205076 TCAGCATCCAATTGTTTTTCCATTTG 59.795 34.615 4.43 0.00 0.00 2.32
2977 3214 8.784043 TCAAAAGAAGAAAAAGGCTAGTATGTC 58.216 33.333 0.00 0.00 0.00 3.06
2988 3225 7.619982 GCGGCATACAATCAAAAGAAGAAAAAG 60.620 37.037 0.00 0.00 0.00 2.27
2996 3233 2.423185 CTGGCGGCATACAATCAAAAGA 59.577 45.455 13.85 0.00 0.00 2.52
2998 3235 1.135141 GCTGGCGGCATACAATCAAAA 60.135 47.619 13.85 0.00 41.35 2.44
3001 3238 1.096967 CAGCTGGCGGCATACAATCA 61.097 55.000 22.28 0.00 44.79 2.57
3006 3243 0.533755 ATCTTCAGCTGGCGGCATAC 60.534 55.000 22.28 8.22 44.79 2.39
3009 3246 0.035534 TTAATCTTCAGCTGGCGGCA 60.036 50.000 22.28 12.58 44.79 5.69
3012 3249 4.032104 GCAATTTTTAATCTTCAGCTGGCG 59.968 41.667 15.13 5.31 0.00 5.69
3014 3251 6.020121 CGATGCAATTTTTAATCTTCAGCTGG 60.020 38.462 15.13 0.00 0.00 4.85
3016 3253 6.855836 TCGATGCAATTTTTAATCTTCAGCT 58.144 32.000 0.00 0.00 0.00 4.24
3027 3264 6.428385 TTTTGTTGGTTCGATGCAATTTTT 57.572 29.167 0.00 0.00 0.00 1.94
3080 3319 2.678769 CGGTCTTTAAAGCCCGGTATGT 60.679 50.000 26.05 0.00 43.33 2.29
3087 3326 4.943093 TGGTTATTACGGTCTTTAAAGCCC 59.057 41.667 10.51 7.83 0.00 5.19
3102 3341 3.101437 TCTCAAGGGCGAGTGGTTATTA 58.899 45.455 0.00 0.00 34.46 0.98
3113 3352 3.861840 TCTAAATCTTGTCTCAAGGGCG 58.138 45.455 9.18 0.00 0.00 6.13
3117 3356 7.331934 TCGGTGATTTCTAAATCTTGTCTCAAG 59.668 37.037 14.68 3.44 43.97 3.02
3118 3357 7.158697 TCGGTGATTTCTAAATCTTGTCTCAA 58.841 34.615 14.68 0.00 43.97 3.02
3120 3359 7.596749 TTCGGTGATTTCTAAATCTTGTCTC 57.403 36.000 14.68 1.99 43.97 3.36
3121 3360 7.979444 TTTCGGTGATTTCTAAATCTTGTCT 57.021 32.000 14.68 0.00 43.97 3.41
3122 3361 9.118236 CTTTTTCGGTGATTTCTAAATCTTGTC 57.882 33.333 14.68 5.13 43.97 3.18
3123 3362 7.595130 GCTTTTTCGGTGATTTCTAAATCTTGT 59.405 33.333 14.68 0.00 43.97 3.16
3124 3363 7.594758 TGCTTTTTCGGTGATTTCTAAATCTTG 59.405 33.333 14.68 6.45 43.97 3.02
3125 3364 7.657336 TGCTTTTTCGGTGATTTCTAAATCTT 58.343 30.769 14.68 0.00 43.97 2.40
3139 3379 2.554032 CTCCAACTGATGCTTTTTCGGT 59.446 45.455 0.00 0.00 34.15 4.69
3141 3381 2.030893 TGCTCCAACTGATGCTTTTTCG 60.031 45.455 0.00 0.00 0.00 3.46
3148 3388 0.737219 GGTGATGCTCCAACTGATGC 59.263 55.000 0.00 0.00 0.00 3.91
3153 3393 3.920817 TGGGGTGATGCTCCAACT 58.079 55.556 0.00 0.00 46.79 3.16
3164 3404 2.650196 CGTGTTTGGCATGGGGTG 59.350 61.111 0.00 0.00 0.00 4.61
3165 3405 3.302344 GCGTGTTTGGCATGGGGT 61.302 61.111 0.00 0.00 34.74 4.95
3166 3406 2.573083 AAGCGTGTTTGGCATGGGG 61.573 57.895 0.00 0.00 34.74 4.96
3167 3407 1.373246 CAAGCGTGTTTGGCATGGG 60.373 57.895 0.00 0.00 34.74 4.00
3168 3408 2.023223 GCAAGCGTGTTTGGCATGG 61.023 57.895 0.59 0.00 34.74 3.66
3169 3409 0.875040 TTGCAAGCGTGTTTGGCATG 60.875 50.000 0.00 0.00 37.17 4.06
3170 3410 0.033781 ATTGCAAGCGTGTTTGGCAT 59.966 45.000 4.94 0.00 0.00 4.40
3171 3411 0.179089 AATTGCAAGCGTGTTTGGCA 60.179 45.000 4.94 0.00 0.00 4.92
3172 3412 0.936600 AAATTGCAAGCGTGTTTGGC 59.063 45.000 4.94 0.00 0.00 4.52
3173 3413 6.035843 AGATATAAATTGCAAGCGTGTTTGG 58.964 36.000 4.94 0.00 0.00 3.28
3174 3414 7.165812 GGTAGATATAAATTGCAAGCGTGTTTG 59.834 37.037 4.94 0.00 0.00 2.93
3175 3415 7.193595 GGTAGATATAAATTGCAAGCGTGTTT 58.806 34.615 4.94 2.63 0.00 2.83
3176 3416 6.511121 CGGTAGATATAAATTGCAAGCGTGTT 60.511 38.462 4.94 0.00 0.00 3.32
3177 3417 5.050363 CGGTAGATATAAATTGCAAGCGTGT 60.050 40.000 4.94 0.00 0.00 4.49
3178 3418 5.374080 CGGTAGATATAAATTGCAAGCGTG 58.626 41.667 4.94 0.00 0.00 5.34
3179 3419 4.451096 CCGGTAGATATAAATTGCAAGCGT 59.549 41.667 4.94 0.00 0.00 5.07
3180 3420 4.451096 ACCGGTAGATATAAATTGCAAGCG 59.549 41.667 4.49 0.00 0.00 4.68
3181 3421 5.106673 GGACCGGTAGATATAAATTGCAAGC 60.107 44.000 7.34 0.00 0.00 4.01
3182 3422 5.995282 TGGACCGGTAGATATAAATTGCAAG 59.005 40.000 7.34 0.00 0.00 4.01
3183 3423 5.931294 TGGACCGGTAGATATAAATTGCAA 58.069 37.500 7.34 0.00 0.00 4.08
3184 3424 5.305902 TCTGGACCGGTAGATATAAATTGCA 59.694 40.000 7.34 0.00 0.00 4.08
3185 3425 5.790593 TCTGGACCGGTAGATATAAATTGC 58.209 41.667 7.34 0.00 0.00 3.56
3186 3426 6.874134 CCTTCTGGACCGGTAGATATAAATTG 59.126 42.308 7.34 0.00 34.57 2.32
3187 3427 6.557633 ACCTTCTGGACCGGTAGATATAAATT 59.442 38.462 7.34 0.00 37.04 1.82
3188 3428 6.082707 ACCTTCTGGACCGGTAGATATAAAT 58.917 40.000 7.34 0.00 37.04 1.40
3189 3429 5.461327 ACCTTCTGGACCGGTAGATATAAA 58.539 41.667 7.34 0.00 37.04 1.40
3190 3430 5.070823 ACCTTCTGGACCGGTAGATATAA 57.929 43.478 7.34 0.00 37.04 0.98
3191 3431 4.736611 ACCTTCTGGACCGGTAGATATA 57.263 45.455 7.34 0.00 37.04 0.86
3192 3432 3.614568 ACCTTCTGGACCGGTAGATAT 57.385 47.619 7.34 0.00 37.04 1.63
3193 3433 3.028850 CAACCTTCTGGACCGGTAGATA 58.971 50.000 7.34 0.00 37.04 1.98
3194 3434 1.831736 CAACCTTCTGGACCGGTAGAT 59.168 52.381 7.34 0.00 37.04 1.98
3195 3435 1.263356 CAACCTTCTGGACCGGTAGA 58.737 55.000 7.34 4.63 37.04 2.59
3196 3436 0.249398 CCAACCTTCTGGACCGGTAG 59.751 60.000 7.34 1.40 38.96 3.18
3197 3437 0.178926 TCCAACCTTCTGGACCGGTA 60.179 55.000 7.34 0.00 40.71 4.02
3198 3438 1.460689 TCCAACCTTCTGGACCGGT 60.461 57.895 6.92 6.92 40.71 5.28
3199 3439 1.192146 TCTCCAACCTTCTGGACCGG 61.192 60.000 0.00 0.00 40.71 5.28
3200 3440 0.685097 TTCTCCAACCTTCTGGACCG 59.315 55.000 0.00 0.00 40.71 4.79
3201 3441 2.505405 GTTTCTCCAACCTTCTGGACC 58.495 52.381 0.00 0.00 40.71 4.46
3211 3451 1.165270 CATGGTCCGGTTTCTCCAAC 58.835 55.000 0.00 0.00 35.57 3.77
3212 3452 0.608035 GCATGGTCCGGTTTCTCCAA 60.608 55.000 0.00 0.00 35.57 3.53
3213 3453 1.002624 GCATGGTCCGGTTTCTCCA 60.003 57.895 0.00 4.48 35.57 3.86
3214 3454 1.749258 GGCATGGTCCGGTTTCTCC 60.749 63.158 0.00 0.00 0.00 3.71
3215 3455 2.106683 CGGCATGGTCCGGTTTCTC 61.107 63.158 0.00 0.00 45.38 2.87
3216 3456 2.046314 CGGCATGGTCCGGTTTCT 60.046 61.111 0.00 0.00 45.38 2.52
3223 3463 0.037419 ATTGTTTTGCGGCATGGTCC 60.037 50.000 2.28 0.00 0.00 4.46
3224 3464 1.349234 GATTGTTTTGCGGCATGGTC 58.651 50.000 2.28 0.00 0.00 4.02
3225 3465 0.388391 CGATTGTTTTGCGGCATGGT 60.388 50.000 2.28 0.00 0.00 3.55
3226 3466 1.685640 GCGATTGTTTTGCGGCATGG 61.686 55.000 2.28 0.00 0.00 3.66
3227 3467 1.007848 TGCGATTGTTTTGCGGCATG 61.008 50.000 2.28 0.00 37.57 4.06
3228 3468 0.733566 CTGCGATTGTTTTGCGGCAT 60.734 50.000 2.28 0.00 37.57 4.40
3229 3469 1.371512 CTGCGATTGTTTTGCGGCA 60.372 52.632 0.00 0.00 37.57 5.69
3230 3470 0.662970 TTCTGCGATTGTTTTGCGGC 60.663 50.000 0.00 0.00 40.49 6.53
3231 3471 1.069296 TCTTCTGCGATTGTTTTGCGG 60.069 47.619 0.00 0.00 41.87 5.69
3232 3472 2.314561 TCTTCTGCGATTGTTTTGCG 57.685 45.000 0.00 0.00 37.57 4.85
3233 3473 3.888934 TCTTCTTCTGCGATTGTTTTGC 58.111 40.909 0.00 0.00 35.05 3.68
3234 3474 4.322804 GCATCTTCTTCTGCGATTGTTTTG 59.677 41.667 0.00 0.00 0.00 2.44
3235 3475 4.217118 AGCATCTTCTTCTGCGATTGTTTT 59.783 37.500 0.00 0.00 43.17 2.43
3236 3476 3.755378 AGCATCTTCTTCTGCGATTGTTT 59.245 39.130 0.00 0.00 43.17 2.83
3237 3477 3.126514 CAGCATCTTCTTCTGCGATTGTT 59.873 43.478 0.00 0.00 43.17 2.83
3238 3478 2.676839 CAGCATCTTCTTCTGCGATTGT 59.323 45.455 0.00 0.00 43.17 2.71
3239 3479 2.934553 TCAGCATCTTCTTCTGCGATTG 59.065 45.455 0.00 0.00 43.17 2.67
3240 3480 3.257469 TCAGCATCTTCTTCTGCGATT 57.743 42.857 0.00 0.00 43.17 3.34
3241 3481 2.975732 TCAGCATCTTCTTCTGCGAT 57.024 45.000 0.00 0.00 43.17 4.58
3242 3482 2.028658 ACTTCAGCATCTTCTTCTGCGA 60.029 45.455 0.00 0.00 43.17 5.10
3243 3483 2.344950 ACTTCAGCATCTTCTTCTGCG 58.655 47.619 0.00 0.00 43.17 5.18
3244 3484 3.670091 GCAACTTCAGCATCTTCTTCTGC 60.670 47.826 0.00 0.00 38.69 4.26
3245 3485 3.119919 GGCAACTTCAGCATCTTCTTCTG 60.120 47.826 0.00 0.00 0.00 3.02
3246 3486 3.080319 GGCAACTTCAGCATCTTCTTCT 58.920 45.455 0.00 0.00 0.00 2.85
3247 3487 2.159599 CGGCAACTTCAGCATCTTCTTC 60.160 50.000 0.00 0.00 0.00 2.87
3248 3488 1.808945 CGGCAACTTCAGCATCTTCTT 59.191 47.619 0.00 0.00 0.00 2.52
3249 3489 1.446907 CGGCAACTTCAGCATCTTCT 58.553 50.000 0.00 0.00 0.00 2.85
3250 3490 0.179179 GCGGCAACTTCAGCATCTTC 60.179 55.000 0.00 0.00 0.00 2.87
3251 3491 0.890542 TGCGGCAACTTCAGCATCTT 60.891 50.000 0.00 0.00 34.39 2.40
3252 3492 1.302752 TGCGGCAACTTCAGCATCT 60.303 52.632 0.00 0.00 34.39 2.90
3253 3493 1.154150 GTGCGGCAACTTCAGCATC 60.154 57.895 3.23 0.00 41.88 3.91
3254 3494 2.629656 GGTGCGGCAACTTCAGCAT 61.630 57.895 11.53 0.00 41.88 3.79
3255 3495 3.286751 GGTGCGGCAACTTCAGCA 61.287 61.111 11.53 0.00 35.95 4.41
3256 3496 2.146073 ATTGGTGCGGCAACTTCAGC 62.146 55.000 20.08 0.00 36.29 4.26
3257 3497 1.131126 CTATTGGTGCGGCAACTTCAG 59.869 52.381 20.08 9.03 0.00 3.02
3258 3498 1.164411 CTATTGGTGCGGCAACTTCA 58.836 50.000 20.08 3.52 0.00 3.02
3259 3499 1.130561 GACTATTGGTGCGGCAACTTC 59.869 52.381 20.08 4.22 0.00 3.01
3260 3500 1.165270 GACTATTGGTGCGGCAACTT 58.835 50.000 20.08 9.31 0.00 2.66
3261 3501 0.036164 TGACTATTGGTGCGGCAACT 59.964 50.000 20.08 1.86 0.00 3.16
3262 3502 0.447801 CTGACTATTGGTGCGGCAAC 59.552 55.000 11.95 11.95 0.00 4.17
3263 3503 1.305219 GCTGACTATTGGTGCGGCAA 61.305 55.000 3.23 0.00 31.99 4.52
3264 3504 1.745115 GCTGACTATTGGTGCGGCA 60.745 57.895 0.00 0.00 31.99 5.69
3265 3505 2.472909 GGCTGACTATTGGTGCGGC 61.473 63.158 0.00 0.00 0.00 6.53
3266 3506 0.676466 TTGGCTGACTATTGGTGCGG 60.676 55.000 0.00 0.00 0.00 5.69
3267 3507 1.164411 TTTGGCTGACTATTGGTGCG 58.836 50.000 0.00 0.00 0.00 5.34
3268 3508 2.736400 GCATTTGGCTGACTATTGGTGC 60.736 50.000 0.00 0.00 40.25 5.01
3269 3509 3.155093 GCATTTGGCTGACTATTGGTG 57.845 47.619 0.00 0.00 40.25 4.17
3279 3519 4.983275 CCTTCAAGGAGAGCATTTGGCTG 61.983 52.174 0.00 0.00 46.75 4.85
3281 3521 1.475682 CCTTCAAGGAGAGCATTTGGC 59.524 52.381 0.00 0.00 37.67 4.52
3282 3522 2.751806 GTCCTTCAAGGAGAGCATTTGG 59.248 50.000 6.31 0.00 46.90 3.28
3283 3523 3.190118 GTGTCCTTCAAGGAGAGCATTTG 59.810 47.826 6.31 0.00 46.90 2.32
3284 3524 3.181440 TGTGTCCTTCAAGGAGAGCATTT 60.181 43.478 6.31 0.00 46.90 2.32
3285 3525 2.373169 TGTGTCCTTCAAGGAGAGCATT 59.627 45.455 6.31 0.00 46.90 3.56
3286 3526 1.980765 TGTGTCCTTCAAGGAGAGCAT 59.019 47.619 6.31 0.00 46.90 3.79
3287 3527 1.070758 GTGTGTCCTTCAAGGAGAGCA 59.929 52.381 6.31 4.12 46.90 4.26
3288 3528 1.609320 GGTGTGTCCTTCAAGGAGAGC 60.609 57.143 6.31 1.29 46.90 4.09
3289 3529 1.694150 TGGTGTGTCCTTCAAGGAGAG 59.306 52.381 6.31 0.00 46.90 3.20
3290 3530 1.801242 TGGTGTGTCCTTCAAGGAGA 58.199 50.000 6.31 1.61 46.90 3.71
3291 3531 2.638480 TTGGTGTGTCCTTCAAGGAG 57.362 50.000 6.31 0.00 46.90 3.69
3292 3532 2.441375 TGATTGGTGTGTCCTTCAAGGA 59.559 45.455 0.34 0.34 43.43 3.36
3293 3533 2.554032 GTGATTGGTGTGTCCTTCAAGG 59.446 50.000 0.00 0.00 36.46 3.61
3294 3534 2.554032 GGTGATTGGTGTGTCCTTCAAG 59.446 50.000 0.00 0.00 37.07 3.02
3295 3535 2.092158 TGGTGATTGGTGTGTCCTTCAA 60.092 45.455 0.00 0.00 37.07 2.69
3296 3536 1.492599 TGGTGATTGGTGTGTCCTTCA 59.507 47.619 0.00 0.00 37.07 3.02
3297 3537 2.270352 TGGTGATTGGTGTGTCCTTC 57.730 50.000 0.00 0.00 37.07 3.46
3298 3538 2.174639 TCTTGGTGATTGGTGTGTCCTT 59.825 45.455 0.00 0.00 37.07 3.36
3299 3539 1.774254 TCTTGGTGATTGGTGTGTCCT 59.226 47.619 0.00 0.00 37.07 3.85
3300 3540 2.270352 TCTTGGTGATTGGTGTGTCC 57.730 50.000 0.00 0.00 0.00 4.02
3301 3541 4.549458 CAAATCTTGGTGATTGGTGTGTC 58.451 43.478 0.00 0.00 43.99 3.67
3302 3542 3.321682 CCAAATCTTGGTGATTGGTGTGT 59.678 43.478 0.00 0.00 43.99 3.72
3303 3543 3.916761 CCAAATCTTGGTGATTGGTGTG 58.083 45.455 0.00 0.00 43.99 3.82
3324 3564 0.514691 CAAGAACTGTTGGCTCTCGC 59.485 55.000 0.00 0.00 0.00 5.03
3325 3565 1.151668 CCAAGAACTGTTGGCTCTCG 58.848 55.000 0.00 0.00 40.70 4.04
3326 3566 1.072331 TCCCAAGAACTGTTGGCTCTC 59.928 52.381 0.00 0.00 45.08 3.20
3327 3567 1.140312 TCCCAAGAACTGTTGGCTCT 58.860 50.000 0.00 0.00 45.08 4.09
3328 3568 1.239347 GTCCCAAGAACTGTTGGCTC 58.761 55.000 0.00 0.00 45.08 4.70
3329 3569 0.550914 TGTCCCAAGAACTGTTGGCT 59.449 50.000 0.00 0.00 45.08 4.75
3330 3570 0.668535 GTGTCCCAAGAACTGTTGGC 59.331 55.000 0.00 0.00 45.08 4.52
3331 3571 2.051334 TGTGTCCCAAGAACTGTTGG 57.949 50.000 0.00 0.00 45.88 3.77
3332 3572 3.443681 AGTTTGTGTCCCAAGAACTGTTG 59.556 43.478 0.00 0.00 33.75 3.33
3333 3573 3.694566 GAGTTTGTGTCCCAAGAACTGTT 59.305 43.478 0.00 0.00 33.75 3.16
3334 3574 3.054361 AGAGTTTGTGTCCCAAGAACTGT 60.054 43.478 0.00 0.00 33.75 3.55
3335 3575 3.545703 AGAGTTTGTGTCCCAAGAACTG 58.454 45.455 0.00 0.00 33.75 3.16
3336 3576 3.199946 TGAGAGTTTGTGTCCCAAGAACT 59.800 43.478 0.00 0.00 33.75 3.01
3337 3577 3.541632 TGAGAGTTTGTGTCCCAAGAAC 58.458 45.455 0.00 0.00 33.75 3.01
3338 3578 3.924114 TGAGAGTTTGTGTCCCAAGAA 57.076 42.857 0.00 0.00 33.75 2.52
3339 3579 4.020218 CCTATGAGAGTTTGTGTCCCAAGA 60.020 45.833 0.00 0.00 33.75 3.02
3340 3580 4.256920 CCTATGAGAGTTTGTGTCCCAAG 58.743 47.826 0.00 0.00 33.75 3.61
3341 3581 3.559171 GCCTATGAGAGTTTGTGTCCCAA 60.559 47.826 0.00 0.00 0.00 4.12
3342 3582 2.027192 GCCTATGAGAGTTTGTGTCCCA 60.027 50.000 0.00 0.00 0.00 4.37
3343 3583 2.633488 GCCTATGAGAGTTTGTGTCCC 58.367 52.381 0.00 0.00 0.00 4.46
3344 3584 2.633488 GGCCTATGAGAGTTTGTGTCC 58.367 52.381 0.00 0.00 0.00 4.02
3345 3585 2.237392 AGGGCCTATGAGAGTTTGTGTC 59.763 50.000 2.82 0.00 0.00 3.67
3346 3586 2.026822 CAGGGCCTATGAGAGTTTGTGT 60.027 50.000 5.28 0.00 0.00 3.72
3347 3587 2.026822 ACAGGGCCTATGAGAGTTTGTG 60.027 50.000 5.28 0.00 0.00 3.33
3348 3588 2.026822 CACAGGGCCTATGAGAGTTTGT 60.027 50.000 5.72 0.00 0.00 2.83
3349 3589 2.026822 ACACAGGGCCTATGAGAGTTTG 60.027 50.000 20.78 0.00 0.00 2.93
3350 3590 2.237392 GACACAGGGCCTATGAGAGTTT 59.763 50.000 20.78 0.00 0.00 2.66
3351 3591 1.834263 GACACAGGGCCTATGAGAGTT 59.166 52.381 20.78 0.00 0.00 3.01
3352 3592 1.490574 GACACAGGGCCTATGAGAGT 58.509 55.000 20.78 4.97 0.00 3.24
3353 3593 0.387202 CGACACAGGGCCTATGAGAG 59.613 60.000 20.78 5.18 0.00 3.20
3354 3594 0.033503 TCGACACAGGGCCTATGAGA 60.034 55.000 20.78 14.33 0.00 3.27
3355 3595 1.043816 ATCGACACAGGGCCTATGAG 58.956 55.000 20.78 12.10 0.00 2.90
3356 3596 0.752658 CATCGACACAGGGCCTATGA 59.247 55.000 20.78 6.82 0.00 2.15
3357 3597 0.882042 GCATCGACACAGGGCCTATG 60.882 60.000 11.03 11.03 0.00 2.23
3358 3598 1.447643 GCATCGACACAGGGCCTAT 59.552 57.895 5.28 0.00 0.00 2.57
3359 3599 2.731571 GGCATCGACACAGGGCCTA 61.732 63.158 5.28 0.00 41.39 3.93
3360 3600 4.101448 GGCATCGACACAGGGCCT 62.101 66.667 0.00 0.00 41.39 5.19
3361 3601 3.918253 TTGGCATCGACACAGGGCC 62.918 63.158 0.00 0.00 44.82 5.80
3362 3602 1.315257 ATTTGGCATCGACACAGGGC 61.315 55.000 0.00 0.00 0.00 5.19
3363 3603 0.734889 GATTTGGCATCGACACAGGG 59.265 55.000 0.00 0.00 0.00 4.45
3364 3604 1.742761 AGATTTGGCATCGACACAGG 58.257 50.000 0.00 0.00 0.00 4.00
3365 3605 4.333649 ACATTAGATTTGGCATCGACACAG 59.666 41.667 0.00 0.00 0.00 3.66
3366 3606 4.260985 ACATTAGATTTGGCATCGACACA 58.739 39.130 0.00 0.00 0.00 3.72
3367 3607 4.332543 TGACATTAGATTTGGCATCGACAC 59.667 41.667 0.00 0.00 0.00 3.67
3368 3608 4.512484 TGACATTAGATTTGGCATCGACA 58.488 39.130 0.00 0.00 0.00 4.35
3369 3609 5.679734 ATGACATTAGATTTGGCATCGAC 57.320 39.130 0.00 0.00 38.47 4.20
3370 3610 5.929697 GATGACATTAGATTTGGCATCGA 57.070 39.130 3.93 0.00 46.54 3.59
3373 3613 5.766670 ACATCGATGACATTAGATTTGGCAT 59.233 36.000 31.33 0.00 45.51 4.40
3374 3614 5.125356 ACATCGATGACATTAGATTTGGCA 58.875 37.500 31.33 0.00 36.33 4.92
3375 3615 5.679734 ACATCGATGACATTAGATTTGGC 57.320 39.130 31.33 0.00 0.00 4.52
3376 3616 6.369890 CCCTACATCGATGACATTAGATTTGG 59.630 42.308 31.33 14.75 0.00 3.28
3377 3617 7.154656 TCCCTACATCGATGACATTAGATTTG 58.845 38.462 31.33 9.38 0.00 2.32
3378 3618 7.233553 TCTCCCTACATCGATGACATTAGATTT 59.766 37.037 31.33 7.69 0.00 2.17
3379 3619 6.721668 TCTCCCTACATCGATGACATTAGATT 59.278 38.462 31.33 8.43 0.00 2.40
3380 3620 6.249192 TCTCCCTACATCGATGACATTAGAT 58.751 40.000 31.33 9.17 0.00 1.98
3381 3621 5.631119 TCTCCCTACATCGATGACATTAGA 58.369 41.667 31.33 21.78 0.00 2.10
3382 3622 5.105957 CCTCTCCCTACATCGATGACATTAG 60.106 48.000 31.33 20.24 0.00 1.73
3383 3623 4.767409 CCTCTCCCTACATCGATGACATTA 59.233 45.833 31.33 12.33 0.00 1.90
3384 3624 3.576118 CCTCTCCCTACATCGATGACATT 59.424 47.826 31.33 11.80 0.00 2.71
3385 3625 3.161067 CCTCTCCCTACATCGATGACAT 58.839 50.000 31.33 12.18 0.00 3.06
3386 3626 2.587522 CCTCTCCCTACATCGATGACA 58.412 52.381 31.33 16.81 0.00 3.58
3387 3627 1.271102 GCCTCTCCCTACATCGATGAC 59.729 57.143 31.33 4.16 0.00 3.06
3388 3628 1.621992 GCCTCTCCCTACATCGATGA 58.378 55.000 31.33 13.93 0.00 2.92
3389 3629 0.605589 GGCCTCTCCCTACATCGATG 59.394 60.000 23.68 23.68 0.00 3.84
3390 3630 0.896019 CGGCCTCTCCCTACATCGAT 60.896 60.000 0.00 0.00 0.00 3.59
3391 3631 1.528542 CGGCCTCTCCCTACATCGA 60.529 63.158 0.00 0.00 0.00 3.59
3392 3632 1.519751 CTCGGCCTCTCCCTACATCG 61.520 65.000 0.00 0.00 0.00 3.84
3393 3633 0.178987 TCTCGGCCTCTCCCTACATC 60.179 60.000 0.00 0.00 0.00 3.06
3394 3634 0.468400 GTCTCGGCCTCTCCCTACAT 60.468 60.000 0.00 0.00 0.00 2.29
3395 3635 1.076923 GTCTCGGCCTCTCCCTACA 60.077 63.158 0.00 0.00 0.00 2.74
3396 3636 1.829096 GGTCTCGGCCTCTCCCTAC 60.829 68.421 0.00 0.00 0.00 3.18
3397 3637 1.581923 AAGGTCTCGGCCTCTCCCTA 61.582 60.000 0.00 0.00 38.03 3.53
3398 3638 1.581923 TAAGGTCTCGGCCTCTCCCT 61.582 60.000 0.00 0.00 38.03 4.20
3399 3639 0.470268 ATAAGGTCTCGGCCTCTCCC 60.470 60.000 0.00 0.00 38.03 4.30
3400 3640 1.341852 GAATAAGGTCTCGGCCTCTCC 59.658 57.143 0.00 0.00 38.03 3.71
3401 3641 1.341852 GGAATAAGGTCTCGGCCTCTC 59.658 57.143 0.00 0.00 38.03 3.20
3402 3642 1.343075 TGGAATAAGGTCTCGGCCTCT 60.343 52.381 0.00 0.00 38.03 3.69
3403 3643 1.120530 TGGAATAAGGTCTCGGCCTC 58.879 55.000 0.00 0.00 38.03 4.70
3404 3644 1.209747 GTTGGAATAAGGTCTCGGCCT 59.790 52.381 0.00 0.00 41.41 5.19
3405 3645 1.065709 TGTTGGAATAAGGTCTCGGCC 60.066 52.381 0.00 0.00 0.00 6.13
3406 3646 2.396590 TGTTGGAATAAGGTCTCGGC 57.603 50.000 0.00 0.00 0.00 5.54
3407 3647 2.614057 GCATGTTGGAATAAGGTCTCGG 59.386 50.000 0.00 0.00 0.00 4.63
3408 3648 2.614057 GGCATGTTGGAATAAGGTCTCG 59.386 50.000 0.00 0.00 0.00 4.04
3409 3649 3.620488 TGGCATGTTGGAATAAGGTCTC 58.380 45.455 0.00 0.00 0.00 3.36
3410 3650 3.737559 TGGCATGTTGGAATAAGGTCT 57.262 42.857 0.00 0.00 0.00 3.85
3411 3651 4.022849 GCTATGGCATGTTGGAATAAGGTC 60.023 45.833 10.98 0.00 38.54 3.85
3412 3652 3.891366 GCTATGGCATGTTGGAATAAGGT 59.109 43.478 10.98 0.00 38.54 3.50
3413 3653 3.256631 GGCTATGGCATGTTGGAATAAGG 59.743 47.826 10.98 0.00 40.87 2.69
3414 3654 4.022589 CAGGCTATGGCATGTTGGAATAAG 60.023 45.833 10.98 0.00 44.07 1.73
3415 3655 3.890756 CAGGCTATGGCATGTTGGAATAA 59.109 43.478 10.98 0.00 44.07 1.40
3416 3656 3.489355 CAGGCTATGGCATGTTGGAATA 58.511 45.455 10.98 0.00 44.07 1.75
3417 3657 2.313317 CAGGCTATGGCATGTTGGAAT 58.687 47.619 10.98 0.00 44.07 3.01
3418 3658 1.766494 CAGGCTATGGCATGTTGGAA 58.234 50.000 10.98 0.00 44.07 3.53
3419 3659 3.500331 CAGGCTATGGCATGTTGGA 57.500 52.632 10.98 0.00 44.07 3.53
3425 3665 0.109342 GGTAGTGCAGGCTATGGCAT 59.891 55.000 4.88 4.88 42.75 4.40
3426 3666 0.982852 AGGTAGTGCAGGCTATGGCA 60.983 55.000 2.58 0.00 40.87 4.92
3427 3667 1.001406 CTAGGTAGTGCAGGCTATGGC 59.999 57.143 0.00 0.00 37.82 4.40
3428 3668 2.320781 ACTAGGTAGTGCAGGCTATGG 58.679 52.381 0.00 0.00 34.72 2.74
3429 3669 3.384789 TCAACTAGGTAGTGCAGGCTATG 59.615 47.826 0.00 0.00 36.50 2.23
3430 3670 3.643237 TCAACTAGGTAGTGCAGGCTAT 58.357 45.455 0.00 0.00 36.50 2.97
3431 3671 3.095912 TCAACTAGGTAGTGCAGGCTA 57.904 47.619 0.00 0.00 36.50 3.93
3432 3672 1.938585 TCAACTAGGTAGTGCAGGCT 58.061 50.000 0.00 0.00 36.50 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.