Multiple sequence alignment - TraesCS2A01G208800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G208800 | chr2A | 100.000 | 5493 | 0 | 0 | 1 | 5493 | 191972042 | 191977534 | 0.000000e+00 | 10144.0 |
1 | TraesCS2A01G208800 | chr2A | 97.009 | 3042 | 74 | 11 | 2063 | 5099 | 77762545 | 77759516 | 0.000000e+00 | 5097.0 |
2 | TraesCS2A01G208800 | chr2A | 95.102 | 245 | 10 | 2 | 4852 | 5095 | 763256180 | 763256423 | 8.630000e-103 | 385.0 |
3 | TraesCS2A01G208800 | chr2A | 89.773 | 264 | 17 | 5 | 4836 | 5095 | 406976759 | 406976502 | 4.100000e-86 | 329.0 |
4 | TraesCS2A01G208800 | chr2A | 88.034 | 117 | 11 | 3 | 602 | 718 | 409194953 | 409194840 | 9.600000e-28 | 135.0 |
5 | TraesCS2A01G208800 | chr2A | 87.179 | 117 | 13 | 2 | 602 | 718 | 178129206 | 178129092 | 1.240000e-26 | 132.0 |
6 | TraesCS2A01G208800 | chr2A | 84.783 | 138 | 9 | 2 | 231 | 357 | 251392131 | 251392267 | 1.610000e-25 | 128.0 |
7 | TraesCS2A01G208800 | chr3A | 97.435 | 3041 | 65 | 10 | 2064 | 5099 | 601662772 | 601659740 | 0.000000e+00 | 5171.0 |
8 | TraesCS2A01G208800 | chr3A | 95.997 | 3048 | 94 | 13 | 2064 | 5103 | 484552571 | 484549544 | 0.000000e+00 | 4927.0 |
9 | TraesCS2A01G208800 | chr3A | 97.093 | 2786 | 64 | 6 | 2322 | 5102 | 738756405 | 738753632 | 0.000000e+00 | 4680.0 |
10 | TraesCS2A01G208800 | chr3A | 89.268 | 1202 | 89 | 24 | 602 | 1769 | 619796969 | 619795774 | 0.000000e+00 | 1469.0 |
11 | TraesCS2A01G208800 | chr3A | 94.815 | 405 | 14 | 3 | 5094 | 5493 | 619778410 | 619778008 | 4.670000e-175 | 625.0 |
12 | TraesCS2A01G208800 | chr3A | 91.909 | 309 | 17 | 1 | 1765 | 2065 | 619778718 | 619778410 | 5.090000e-115 | 425.0 |
13 | TraesCS2A01G208800 | chr3A | 90.066 | 151 | 12 | 2 | 355 | 504 | 512088 | 512236 | 5.620000e-45 | 193.0 |
14 | TraesCS2A01G208800 | chr7A | 96.345 | 3037 | 75 | 11 | 2064 | 5095 | 441744938 | 441747943 | 0.000000e+00 | 4961.0 |
15 | TraesCS2A01G208800 | chr7A | 96.734 | 2174 | 52 | 8 | 2065 | 4230 | 217690457 | 217688295 | 0.000000e+00 | 3603.0 |
16 | TraesCS2A01G208800 | chr7A | 85.507 | 414 | 34 | 13 | 2057 | 2464 | 687959880 | 687960273 | 5.120000e-110 | 409.0 |
17 | TraesCS2A01G208800 | chr7A | 83.944 | 355 | 36 | 13 | 1279 | 1623 | 66748008 | 66748351 | 2.470000e-83 | 320.0 |
18 | TraesCS2A01G208800 | chr7A | 83.616 | 354 | 37 | 10 | 1279 | 1626 | 577676086 | 577675748 | 4.130000e-81 | 313.0 |
19 | TraesCS2A01G208800 | chr7A | 82.743 | 226 | 33 | 5 | 1057 | 1276 | 299435836 | 299436061 | 4.340000e-46 | 196.0 |
20 | TraesCS2A01G208800 | chr7A | 90.066 | 151 | 12 | 2 | 355 | 504 | 552425842 | 552425694 | 5.620000e-45 | 193.0 |
21 | TraesCS2A01G208800 | chr7A | 86.508 | 126 | 14 | 2 | 602 | 726 | 175350132 | 175350255 | 9.600000e-28 | 135.0 |
22 | TraesCS2A01G208800 | chr7A | 86.885 | 122 | 13 | 2 | 602 | 722 | 95883439 | 95883558 | 3.450000e-27 | 134.0 |
23 | TraesCS2A01G208800 | chr1A | 96.709 | 2856 | 57 | 9 | 2276 | 5099 | 13803599 | 13800749 | 0.000000e+00 | 4719.0 |
24 | TraesCS2A01G208800 | chr1A | 97.087 | 2506 | 54 | 8 | 2596 | 5097 | 406150855 | 406153345 | 0.000000e+00 | 4205.0 |
25 | TraesCS2A01G208800 | chr1A | 94.213 | 553 | 11 | 7 | 2065 | 2611 | 406148878 | 406149415 | 0.000000e+00 | 824.0 |
26 | TraesCS2A01G208800 | chr1A | 92.176 | 409 | 21 | 6 | 5094 | 5492 | 132779248 | 132779655 | 7.990000e-158 | 568.0 |
27 | TraesCS2A01G208800 | chr1A | 78.249 | 377 | 48 | 16 | 1513 | 1863 | 413780690 | 413781058 | 1.550000e-50 | 211.0 |
28 | TraesCS2A01G208800 | chr1A | 90.066 | 151 | 12 | 2 | 355 | 504 | 335113413 | 335113561 | 5.620000e-45 | 193.0 |
29 | TraesCS2A01G208800 | chr7B | 93.367 | 2352 | 120 | 22 | 2593 | 4916 | 554184530 | 554182187 | 0.000000e+00 | 3446.0 |
30 | TraesCS2A01G208800 | chr7B | 78.475 | 446 | 63 | 19 | 904 | 1336 | 621459324 | 621458899 | 1.520000e-65 | 261.0 |
31 | TraesCS2A01G208800 | chr7B | 90.066 | 151 | 12 | 2 | 355 | 504 | 379185803 | 379185951 | 5.620000e-45 | 193.0 |
32 | TraesCS2A01G208800 | chr7B | 89.404 | 151 | 13 | 2 | 355 | 504 | 551543326 | 551543474 | 2.610000e-43 | 187.0 |
33 | TraesCS2A01G208800 | chr1B | 92.946 | 2325 | 151 | 10 | 2588 | 4907 | 179140934 | 179138618 | 0.000000e+00 | 3373.0 |
34 | TraesCS2A01G208800 | chr1B | 91.951 | 410 | 21 | 7 | 5094 | 5492 | 529319918 | 529319510 | 1.030000e-156 | 564.0 |
35 | TraesCS2A01G208800 | chr1B | 92.916 | 367 | 19 | 4 | 5094 | 5453 | 214026031 | 214025665 | 1.360000e-145 | 527.0 |
36 | TraesCS2A01G208800 | chr1B | 82.143 | 252 | 37 | 5 | 1513 | 1761 | 440264187 | 440264433 | 5.580000e-50 | 209.0 |
37 | TraesCS2A01G208800 | chr5B | 88.514 | 740 | 51 | 15 | 1303 | 2009 | 195736458 | 195737196 | 0.000000e+00 | 865.0 |
38 | TraesCS2A01G208800 | chr5B | 90.709 | 409 | 30 | 4 | 2064 | 2469 | 478925930 | 478926333 | 6.260000e-149 | 538.0 |
39 | TraesCS2A01G208800 | chr5B | 84.182 | 373 | 27 | 13 | 1 | 357 | 633488333 | 633488689 | 3.170000e-87 | 333.0 |
40 | TraesCS2A01G208800 | chr5B | 88.889 | 90 | 10 | 0 | 263 | 352 | 18950250 | 18950339 | 1.620000e-20 | 111.0 |
41 | TraesCS2A01G208800 | chr1D | 82.270 | 1066 | 103 | 44 | 994 | 2008 | 386380425 | 386379395 | 0.000000e+00 | 843.0 |
42 | TraesCS2A01G208800 | chr1D | 90.488 | 410 | 29 | 5 | 2065 | 2469 | 492910621 | 492911025 | 2.910000e-147 | 532.0 |
43 | TraesCS2A01G208800 | chr1D | 97.143 | 105 | 3 | 0 | 2485 | 2589 | 492912186 | 492912290 | 1.570000e-40 | 178.0 |
44 | TraesCS2A01G208800 | chr1D | 87.705 | 122 | 12 | 3 | 602 | 722 | 466377197 | 466377078 | 7.420000e-29 | 139.0 |
45 | TraesCS2A01G208800 | chr5D | 89.574 | 470 | 47 | 2 | 1541 | 2009 | 53584143 | 53583675 | 3.660000e-166 | 595.0 |
46 | TraesCS2A01G208800 | chr5D | 90.244 | 369 | 24 | 3 | 1 | 357 | 401034783 | 401034415 | 6.440000e-129 | 472.0 |
47 | TraesCS2A01G208800 | chr5D | 90.083 | 363 | 25 | 2 | 1 | 352 | 529173229 | 529172867 | 1.390000e-125 | 460.0 |
48 | TraesCS2A01G208800 | chr5D | 89.807 | 363 | 26 | 2 | 1 | 352 | 11172378 | 11172016 | 6.490000e-124 | 455.0 |
49 | TraesCS2A01G208800 | chr5D | 82.581 | 310 | 21 | 17 | 1259 | 1544 | 53584724 | 53584424 | 5.500000e-60 | 243.0 |
50 | TraesCS2A01G208800 | chr5D | 89.381 | 113 | 11 | 1 | 1082 | 1194 | 53584841 | 53584730 | 2.060000e-29 | 141.0 |
51 | TraesCS2A01G208800 | chr5D | 91.071 | 56 | 5 | 0 | 1088 | 1143 | 53584890 | 53584835 | 5.900000e-10 | 76.8 |
52 | TraesCS2A01G208800 | chr2B | 92.195 | 410 | 21 | 6 | 5094 | 5492 | 129329297 | 129328888 | 2.220000e-158 | 569.0 |
53 | TraesCS2A01G208800 | chr2B | 89.663 | 416 | 32 | 7 | 2064 | 2476 | 780595946 | 780596353 | 2.270000e-143 | 520.0 |
54 | TraesCS2A01G208800 | chr2B | 84.046 | 351 | 35 | 10 | 1279 | 1623 | 357164768 | 357165103 | 8.880000e-83 | 318.0 |
55 | TraesCS2A01G208800 | chr2B | 83.333 | 354 | 38 | 10 | 1279 | 1626 | 551251722 | 551251384 | 1.920000e-79 | 307.0 |
56 | TraesCS2A01G208800 | chr2B | 79.379 | 451 | 70 | 15 | 901 | 1336 | 546939338 | 546939780 | 4.160000e-76 | 296.0 |
57 | TraesCS2A01G208800 | chr2B | 90.066 | 151 | 12 | 2 | 355 | 504 | 127200464 | 127200612 | 5.620000e-45 | 193.0 |
58 | TraesCS2A01G208800 | chr2B | 86.290 | 124 | 14 | 3 | 602 | 724 | 736407804 | 736407683 | 1.240000e-26 | 132.0 |
59 | TraesCS2A01G208800 | chr4D | 93.388 | 363 | 12 | 2 | 1 | 352 | 495626382 | 495626021 | 1.360000e-145 | 527.0 |
60 | TraesCS2A01G208800 | chr4D | 86.683 | 413 | 26 | 16 | 2060 | 2469 | 319327383 | 319326997 | 1.090000e-116 | 431.0 |
61 | TraesCS2A01G208800 | chrUn | 93.113 | 363 | 13 | 3 | 1 | 352 | 30350388 | 30350027 | 6.310000e-144 | 521.0 |
62 | TraesCS2A01G208800 | chr3D | 91.892 | 370 | 17 | 2 | 1 | 359 | 41207021 | 41206654 | 6.350000e-139 | 505.0 |
63 | TraesCS2A01G208800 | chr3D | 89.973 | 369 | 25 | 3 | 1 | 357 | 533413222 | 533412854 | 3.000000e-127 | 466.0 |
64 | TraesCS2A01G208800 | chr6A | 89.242 | 409 | 33 | 6 | 5094 | 5492 | 447832026 | 447832433 | 8.210000e-138 | 501.0 |
65 | TraesCS2A01G208800 | chr6A | 85.808 | 458 | 50 | 11 | 1543 | 1998 | 369413982 | 369413538 | 6.440000e-129 | 472.0 |
66 | TraesCS2A01G208800 | chr6A | 89.744 | 117 | 10 | 2 | 602 | 718 | 244164342 | 244164228 | 1.230000e-31 | 148.0 |
67 | TraesCS2A01G208800 | chr3B | 87.963 | 432 | 38 | 9 | 2044 | 2469 | 10053153 | 10052730 | 1.060000e-136 | 497.0 |
68 | TraesCS2A01G208800 | chr3B | 89.076 | 119 | 12 | 1 | 228 | 346 | 743581493 | 743581610 | 4.430000e-31 | 147.0 |
69 | TraesCS2A01G208800 | chr3B | 89.076 | 119 | 12 | 1 | 228 | 346 | 743659786 | 743659903 | 4.430000e-31 | 147.0 |
70 | TraesCS2A01G208800 | chr7D | 91.758 | 364 | 18 | 3 | 1 | 352 | 633930844 | 633931207 | 3.820000e-136 | 496.0 |
71 | TraesCS2A01G208800 | chr7D | 88.740 | 373 | 28 | 5 | 2057 | 2426 | 221843173 | 221842812 | 1.400000e-120 | 444.0 |
72 | TraesCS2A01G208800 | chr7D | 90.722 | 194 | 16 | 2 | 355 | 547 | 93620307 | 93620115 | 1.960000e-64 | 257.0 |
73 | TraesCS2A01G208800 | chr7D | 88.889 | 117 | 11 | 2 | 602 | 718 | 245282716 | 245282602 | 5.740000e-30 | 143.0 |
74 | TraesCS2A01G208800 | chr7D | 91.803 | 61 | 4 | 1 | 542 | 601 | 93620100 | 93620040 | 3.530000e-12 | 84.2 |
75 | TraesCS2A01G208800 | chr2D | 92.045 | 352 | 28 | 0 | 1 | 352 | 484852676 | 484852325 | 3.820000e-136 | 496.0 |
76 | TraesCS2A01G208800 | chr2D | 90.833 | 240 | 11 | 2 | 140 | 368 | 645268213 | 645267974 | 1.490000e-80 | 311.0 |
77 | TraesCS2A01G208800 | chr6B | 87.893 | 413 | 32 | 9 | 2064 | 2469 | 35408242 | 35407841 | 2.320000e-128 | 470.0 |
78 | TraesCS2A01G208800 | chr6B | 86.715 | 414 | 39 | 9 | 2057 | 2468 | 678820584 | 678820983 | 3.900000e-121 | 446.0 |
79 | TraesCS2A01G208800 | chr6B | 83.333 | 354 | 38 | 11 | 1279 | 1626 | 375449105 | 375448767 | 1.920000e-79 | 307.0 |
80 | TraesCS2A01G208800 | chr6B | 90.066 | 151 | 12 | 2 | 355 | 504 | 247010226 | 247010078 | 5.620000e-45 | 193.0 |
81 | TraesCS2A01G208800 | chr6D | 80.916 | 524 | 69 | 17 | 904 | 1401 | 86915704 | 86916222 | 8.630000e-103 | 385.0 |
82 | TraesCS2A01G208800 | chr6D | 89.404 | 151 | 13 | 2 | 355 | 504 | 38485798 | 38485946 | 2.610000e-43 | 187.0 |
83 | TraesCS2A01G208800 | chr6D | 91.429 | 70 | 4 | 2 | 534 | 601 | 450269169 | 450269238 | 1.630000e-15 | 95.3 |
84 | TraesCS2A01G208800 | chr5A | 86.550 | 342 | 27 | 13 | 2053 | 2380 | 286263193 | 286262857 | 5.230000e-95 | 359.0 |
85 | TraesCS2A01G208800 | chr5A | 86.747 | 332 | 25 | 13 | 2060 | 2380 | 624157131 | 624157454 | 8.750000e-93 | 351.0 |
86 | TraesCS2A01G208800 | chr5A | 79.596 | 446 | 58 | 16 | 904 | 1336 | 220941683 | 220942108 | 6.960000e-74 | 289.0 |
87 | TraesCS2A01G208800 | chr5A | 84.211 | 133 | 15 | 6 | 223 | 352 | 18514246 | 18514117 | 2.080000e-24 | 124.0 |
88 | TraesCS2A01G208800 | chr4A | 82.743 | 226 | 33 | 5 | 1057 | 1276 | 374656587 | 374656812 | 4.340000e-46 | 196.0 |
89 | TraesCS2A01G208800 | chr4A | 82.083 | 240 | 29 | 8 | 5265 | 5492 | 562487128 | 562487365 | 5.620000e-45 | 193.0 |
90 | TraesCS2A01G208800 | chr4B | 87.611 | 113 | 12 | 2 | 602 | 714 | 577016649 | 577016759 | 4.470000e-26 | 130.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G208800 | chr2A | 191972042 | 191977534 | 5492 | False | 10144.00 | 10144 | 100.00000 | 1 | 5493 | 1 | chr2A.!!$F1 | 5492 |
1 | TraesCS2A01G208800 | chr2A | 77759516 | 77762545 | 3029 | True | 5097.00 | 5097 | 97.00900 | 2063 | 5099 | 1 | chr2A.!!$R1 | 3036 |
2 | TraesCS2A01G208800 | chr3A | 601659740 | 601662772 | 3032 | True | 5171.00 | 5171 | 97.43500 | 2064 | 5099 | 1 | chr3A.!!$R2 | 3035 |
3 | TraesCS2A01G208800 | chr3A | 484549544 | 484552571 | 3027 | True | 4927.00 | 4927 | 95.99700 | 2064 | 5103 | 1 | chr3A.!!$R1 | 3039 |
4 | TraesCS2A01G208800 | chr3A | 738753632 | 738756405 | 2773 | True | 4680.00 | 4680 | 97.09300 | 2322 | 5102 | 1 | chr3A.!!$R4 | 2780 |
5 | TraesCS2A01G208800 | chr3A | 619795774 | 619796969 | 1195 | True | 1469.00 | 1469 | 89.26800 | 602 | 1769 | 1 | chr3A.!!$R3 | 1167 |
6 | TraesCS2A01G208800 | chr3A | 619778008 | 619778718 | 710 | True | 525.00 | 625 | 93.36200 | 1765 | 5493 | 2 | chr3A.!!$R5 | 3728 |
7 | TraesCS2A01G208800 | chr7A | 441744938 | 441747943 | 3005 | False | 4961.00 | 4961 | 96.34500 | 2064 | 5095 | 1 | chr7A.!!$F5 | 3031 |
8 | TraesCS2A01G208800 | chr7A | 217688295 | 217690457 | 2162 | True | 3603.00 | 3603 | 96.73400 | 2065 | 4230 | 1 | chr7A.!!$R1 | 2165 |
9 | TraesCS2A01G208800 | chr1A | 13800749 | 13803599 | 2850 | True | 4719.00 | 4719 | 96.70900 | 2276 | 5099 | 1 | chr1A.!!$R1 | 2823 |
10 | TraesCS2A01G208800 | chr1A | 406148878 | 406153345 | 4467 | False | 2514.50 | 4205 | 95.65000 | 2065 | 5097 | 2 | chr1A.!!$F4 | 3032 |
11 | TraesCS2A01G208800 | chr7B | 554182187 | 554184530 | 2343 | True | 3446.00 | 3446 | 93.36700 | 2593 | 4916 | 1 | chr7B.!!$R1 | 2323 |
12 | TraesCS2A01G208800 | chr1B | 179138618 | 179140934 | 2316 | True | 3373.00 | 3373 | 92.94600 | 2588 | 4907 | 1 | chr1B.!!$R1 | 2319 |
13 | TraesCS2A01G208800 | chr5B | 195736458 | 195737196 | 738 | False | 865.00 | 865 | 88.51400 | 1303 | 2009 | 1 | chr5B.!!$F2 | 706 |
14 | TraesCS2A01G208800 | chr1D | 386379395 | 386380425 | 1030 | True | 843.00 | 843 | 82.27000 | 994 | 2008 | 1 | chr1D.!!$R1 | 1014 |
15 | TraesCS2A01G208800 | chr1D | 492910621 | 492912290 | 1669 | False | 355.00 | 532 | 93.81550 | 2065 | 2589 | 2 | chr1D.!!$F1 | 524 |
16 | TraesCS2A01G208800 | chr5D | 53583675 | 53584890 | 1215 | True | 263.95 | 595 | 88.15175 | 1082 | 2009 | 4 | chr5D.!!$R4 | 927 |
17 | TraesCS2A01G208800 | chr6D | 86915704 | 86916222 | 518 | False | 385.00 | 385 | 80.91600 | 904 | 1401 | 1 | chr6D.!!$F2 | 497 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
120 | 121 | 0.108424 | AGGCTCGATGCTCAGTGTTC | 60.108 | 55.000 | 6.78 | 0.0 | 42.39 | 3.18 | F |
553 | 554 | 0.324275 | AAAATGGGGATGTGGACCGG | 60.324 | 55.000 | 0.00 | 0.0 | 0.00 | 5.28 | F |
571 | 572 | 0.399806 | GGAGAGGGGGCTTGAGAGAT | 60.400 | 60.000 | 0.00 | 0.0 | 0.00 | 2.75 | F |
1266 | 1363 | 0.615261 | GGAGAGAAACGAGGGGAGGT | 60.615 | 60.000 | 0.00 | 0.0 | 0.00 | 3.85 | F |
1430 | 1539 | 0.665835 | CTGCCACTCTAGCGGTCTAG | 59.334 | 60.000 | 0.00 | 0.0 | 42.87 | 2.43 | F |
2625 | 5194 | 1.296392 | CTTGAGTCCATGTCCGCCA | 59.704 | 57.895 | 0.00 | 0.0 | 0.00 | 5.69 | F |
3380 | 5973 | 0.321122 | CGGCAACAAGGAGAAGAGCT | 60.321 | 55.000 | 0.00 | 0.0 | 0.00 | 4.09 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1187 | 1264 | 0.107993 | CTTCCAGGAGCATGCGAGAA | 60.108 | 55.000 | 13.01 | 10.76 | 0.00 | 2.87 | R |
1429 | 1538 | 0.831307 | GGATTGAGGGAACGTAGGCT | 59.169 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 | R |
1881 | 2310 | 1.523258 | CAGGGAAGCAGGAGCATCG | 60.523 | 63.158 | 0.00 | 0.00 | 45.49 | 3.84 | R |
2254 | 2699 | 2.096819 | GCGTGTGTTAGAGAGAGAGAGG | 59.903 | 54.545 | 0.00 | 0.00 | 0.00 | 3.69 | R |
3196 | 5780 | 2.237643 | TGGCTAACCACGGTTGATGTAT | 59.762 | 45.455 | 11.80 | 0.00 | 42.67 | 2.29 | R |
3768 | 6376 | 1.578926 | CGTCGGCATGCTTTTCCAA | 59.421 | 52.632 | 18.92 | 0.00 | 0.00 | 3.53 | R |
5134 | 7758 | 4.023980 | CCAGTACTTCTATCAGTGACCCA | 58.976 | 47.826 | 0.00 | 0.00 | 0.00 | 4.51 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
67 | 68 | 9.875691 | AAAAATATCAGAAAAATAGGGAAGCAC | 57.124 | 29.630 | 0.00 | 0.00 | 0.00 | 4.40 |
68 | 69 | 8.593945 | AAATATCAGAAAAATAGGGAAGCACA | 57.406 | 30.769 | 0.00 | 0.00 | 0.00 | 4.57 |
69 | 70 | 8.593945 | AATATCAGAAAAATAGGGAAGCACAA | 57.406 | 30.769 | 0.00 | 0.00 | 0.00 | 3.33 |
70 | 71 | 5.964958 | TCAGAAAAATAGGGAAGCACAAG | 57.035 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
71 | 72 | 5.385198 | TCAGAAAAATAGGGAAGCACAAGT | 58.615 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
72 | 73 | 5.833131 | TCAGAAAAATAGGGAAGCACAAGTT | 59.167 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
73 | 74 | 6.323739 | TCAGAAAAATAGGGAAGCACAAGTTT | 59.676 | 34.615 | 0.00 | 0.00 | 0.00 | 2.66 |
74 | 75 | 7.504238 | TCAGAAAAATAGGGAAGCACAAGTTTA | 59.496 | 33.333 | 0.00 | 0.00 | 0.00 | 2.01 |
75 | 76 | 7.595130 | CAGAAAAATAGGGAAGCACAAGTTTAC | 59.405 | 37.037 | 0.00 | 0.00 | 0.00 | 2.01 |
76 | 77 | 7.505923 | AGAAAAATAGGGAAGCACAAGTTTACT | 59.494 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
77 | 78 | 7.597288 | AAAATAGGGAAGCACAAGTTTACTT | 57.403 | 32.000 | 0.00 | 0.00 | 36.45 | 2.24 |
78 | 79 | 7.597288 | AAATAGGGAAGCACAAGTTTACTTT | 57.403 | 32.000 | 0.00 | 0.00 | 33.11 | 2.66 |
79 | 80 | 6.819397 | ATAGGGAAGCACAAGTTTACTTTC | 57.181 | 37.500 | 0.00 | 0.00 | 33.11 | 2.62 |
80 | 81 | 4.793201 | AGGGAAGCACAAGTTTACTTTCT | 58.207 | 39.130 | 0.00 | 0.00 | 33.11 | 2.52 |
81 | 82 | 4.580580 | AGGGAAGCACAAGTTTACTTTCTG | 59.419 | 41.667 | 0.00 | 0.00 | 33.11 | 3.02 |
82 | 83 | 4.261614 | GGGAAGCACAAGTTTACTTTCTGG | 60.262 | 45.833 | 0.00 | 0.00 | 33.11 | 3.86 |
83 | 84 | 4.338400 | GGAAGCACAAGTTTACTTTCTGGT | 59.662 | 41.667 | 0.00 | 0.00 | 33.11 | 4.00 |
84 | 85 | 5.163550 | GGAAGCACAAGTTTACTTTCTGGTT | 60.164 | 40.000 | 11.48 | 11.48 | 35.84 | 3.67 |
85 | 86 | 6.038936 | GGAAGCACAAGTTTACTTTCTGGTTA | 59.961 | 38.462 | 11.57 | 0.00 | 34.49 | 2.85 |
86 | 87 | 7.255486 | GGAAGCACAAGTTTACTTTCTGGTTAT | 60.255 | 37.037 | 11.57 | 0.00 | 34.49 | 1.89 |
87 | 88 | 7.582667 | AGCACAAGTTTACTTTCTGGTTATT | 57.417 | 32.000 | 0.00 | 0.00 | 33.11 | 1.40 |
88 | 89 | 7.425606 | AGCACAAGTTTACTTTCTGGTTATTG | 58.574 | 34.615 | 0.00 | 0.00 | 33.11 | 1.90 |
89 | 90 | 6.143919 | GCACAAGTTTACTTTCTGGTTATTGC | 59.856 | 38.462 | 0.00 | 0.00 | 33.11 | 3.56 |
90 | 91 | 7.199766 | CACAAGTTTACTTTCTGGTTATTGCA | 58.800 | 34.615 | 0.00 | 0.00 | 33.11 | 4.08 |
91 | 92 | 7.167468 | CACAAGTTTACTTTCTGGTTATTGCAC | 59.833 | 37.037 | 0.00 | 0.00 | 33.11 | 4.57 |
92 | 93 | 5.997385 | AGTTTACTTTCTGGTTATTGCACG | 58.003 | 37.500 | 0.00 | 0.00 | 0.00 | 5.34 |
93 | 94 | 5.048991 | AGTTTACTTTCTGGTTATTGCACGG | 60.049 | 40.000 | 0.00 | 0.00 | 0.00 | 4.94 |
94 | 95 | 2.858745 | ACTTTCTGGTTATTGCACGGT | 58.141 | 42.857 | 0.00 | 0.00 | 0.00 | 4.83 |
95 | 96 | 4.010667 | ACTTTCTGGTTATTGCACGGTA | 57.989 | 40.909 | 0.00 | 0.00 | 0.00 | 4.02 |
96 | 97 | 4.000988 | ACTTTCTGGTTATTGCACGGTAG | 58.999 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
97 | 98 | 3.965379 | TTCTGGTTATTGCACGGTAGA | 57.035 | 42.857 | 0.00 | 0.00 | 0.00 | 2.59 |
98 | 99 | 4.481368 | TTCTGGTTATTGCACGGTAGAT | 57.519 | 40.909 | 0.00 | 0.00 | 0.00 | 1.98 |
99 | 100 | 3.792401 | TCTGGTTATTGCACGGTAGATG | 58.208 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
100 | 101 | 3.196901 | TCTGGTTATTGCACGGTAGATGT | 59.803 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
101 | 102 | 4.403113 | TCTGGTTATTGCACGGTAGATGTA | 59.597 | 41.667 | 0.00 | 0.00 | 0.00 | 2.29 |
102 | 103 | 4.689071 | TGGTTATTGCACGGTAGATGTAG | 58.311 | 43.478 | 0.00 | 0.00 | 0.00 | 2.74 |
103 | 104 | 4.056050 | GGTTATTGCACGGTAGATGTAGG | 58.944 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
104 | 105 | 2.240493 | ATTGCACGGTAGATGTAGGC | 57.760 | 50.000 | 0.00 | 0.00 | 0.00 | 3.93 |
105 | 106 | 1.191535 | TTGCACGGTAGATGTAGGCT | 58.808 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
106 | 107 | 0.744874 | TGCACGGTAGATGTAGGCTC | 59.255 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
107 | 108 | 0.317938 | GCACGGTAGATGTAGGCTCG | 60.318 | 60.000 | 0.00 | 0.00 | 0.00 | 5.03 |
108 | 109 | 1.306148 | CACGGTAGATGTAGGCTCGA | 58.694 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
109 | 110 | 1.880675 | CACGGTAGATGTAGGCTCGAT | 59.119 | 52.381 | 0.00 | 0.00 | 0.00 | 3.59 |
110 | 111 | 1.880675 | ACGGTAGATGTAGGCTCGATG | 59.119 | 52.381 | 0.00 | 0.00 | 0.00 | 3.84 |
111 | 112 | 1.401670 | CGGTAGATGTAGGCTCGATGC | 60.402 | 57.143 | 0.00 | 0.00 | 41.94 | 3.91 |
112 | 113 | 1.889829 | GGTAGATGTAGGCTCGATGCT | 59.110 | 52.381 | 0.00 | 0.00 | 42.39 | 3.79 |
113 | 114 | 2.094957 | GGTAGATGTAGGCTCGATGCTC | 60.095 | 54.545 | 0.00 | 0.00 | 42.39 | 4.26 |
114 | 115 | 1.697284 | AGATGTAGGCTCGATGCTCA | 58.303 | 50.000 | 0.00 | 5.21 | 42.39 | 4.26 |
115 | 116 | 1.612950 | AGATGTAGGCTCGATGCTCAG | 59.387 | 52.381 | 0.00 | 0.00 | 42.39 | 3.35 |
116 | 117 | 1.339610 | GATGTAGGCTCGATGCTCAGT | 59.660 | 52.381 | 0.00 | 0.00 | 42.39 | 3.41 |
117 | 118 | 0.457443 | TGTAGGCTCGATGCTCAGTG | 59.543 | 55.000 | 0.00 | 0.00 | 42.39 | 3.66 |
118 | 119 | 0.457851 | GTAGGCTCGATGCTCAGTGT | 59.542 | 55.000 | 0.00 | 0.00 | 42.39 | 3.55 |
119 | 120 | 1.134965 | GTAGGCTCGATGCTCAGTGTT | 60.135 | 52.381 | 0.00 | 0.00 | 42.39 | 3.32 |
120 | 121 | 0.108424 | AGGCTCGATGCTCAGTGTTC | 60.108 | 55.000 | 6.78 | 0.00 | 42.39 | 3.18 |
121 | 122 | 0.390340 | GGCTCGATGCTCAGTGTTCA | 60.390 | 55.000 | 6.78 | 0.00 | 42.39 | 3.18 |
122 | 123 | 0.997932 | GCTCGATGCTCAGTGTTCAG | 59.002 | 55.000 | 0.00 | 0.00 | 38.95 | 3.02 |
123 | 124 | 1.403382 | GCTCGATGCTCAGTGTTCAGA | 60.403 | 52.381 | 0.00 | 0.00 | 38.95 | 3.27 |
124 | 125 | 2.528125 | CTCGATGCTCAGTGTTCAGAG | 58.472 | 52.381 | 0.00 | 0.00 | 35.01 | 3.35 |
125 | 126 | 1.889170 | TCGATGCTCAGTGTTCAGAGT | 59.111 | 47.619 | 0.00 | 0.00 | 34.39 | 3.24 |
126 | 127 | 2.297315 | TCGATGCTCAGTGTTCAGAGTT | 59.703 | 45.455 | 0.00 | 0.00 | 34.39 | 3.01 |
127 | 128 | 3.506067 | TCGATGCTCAGTGTTCAGAGTTA | 59.494 | 43.478 | 0.00 | 0.00 | 34.39 | 2.24 |
128 | 129 | 4.022329 | TCGATGCTCAGTGTTCAGAGTTAA | 60.022 | 41.667 | 0.00 | 0.00 | 34.39 | 2.01 |
129 | 130 | 4.867047 | CGATGCTCAGTGTTCAGAGTTAAT | 59.133 | 41.667 | 0.00 | 0.00 | 34.39 | 1.40 |
130 | 131 | 6.036470 | CGATGCTCAGTGTTCAGAGTTAATA | 58.964 | 40.000 | 0.00 | 0.00 | 34.39 | 0.98 |
131 | 132 | 6.699204 | CGATGCTCAGTGTTCAGAGTTAATAT | 59.301 | 38.462 | 0.00 | 0.00 | 34.39 | 1.28 |
132 | 133 | 7.862873 | CGATGCTCAGTGTTCAGAGTTAATATA | 59.137 | 37.037 | 0.00 | 0.00 | 34.39 | 0.86 |
133 | 134 | 9.703892 | GATGCTCAGTGTTCAGAGTTAATATAT | 57.296 | 33.333 | 0.00 | 0.00 | 34.39 | 0.86 |
134 | 135 | 8.877808 | TGCTCAGTGTTCAGAGTTAATATATG | 57.122 | 34.615 | 0.00 | 0.00 | 34.39 | 1.78 |
135 | 136 | 8.478066 | TGCTCAGTGTTCAGAGTTAATATATGT | 58.522 | 33.333 | 0.00 | 0.00 | 34.39 | 2.29 |
136 | 137 | 9.319143 | GCTCAGTGTTCAGAGTTAATATATGTT | 57.681 | 33.333 | 0.00 | 0.00 | 34.39 | 2.71 |
166 | 167 | 8.627208 | AGATTGACTACAATTTGACATTCAGT | 57.373 | 30.769 | 2.79 | 0.00 | 45.30 | 3.41 |
167 | 168 | 9.071276 | AGATTGACTACAATTTGACATTCAGTT | 57.929 | 29.630 | 2.79 | 0.00 | 45.30 | 3.16 |
168 | 169 | 9.683069 | GATTGACTACAATTTGACATTCAGTTT | 57.317 | 29.630 | 2.79 | 0.00 | 45.30 | 2.66 |
179 | 180 | 9.934190 | ATTTGACATTCAGTTTAAAATTTGTGC | 57.066 | 25.926 | 0.00 | 0.00 | 0.00 | 4.57 |
180 | 181 | 8.715191 | TTGACATTCAGTTTAAAATTTGTGCT | 57.285 | 26.923 | 0.00 | 0.00 | 0.00 | 4.40 |
181 | 182 | 8.715191 | TGACATTCAGTTTAAAATTTGTGCTT | 57.285 | 26.923 | 0.00 | 0.00 | 0.00 | 3.91 |
182 | 183 | 8.816144 | TGACATTCAGTTTAAAATTTGTGCTTC | 58.184 | 29.630 | 0.00 | 0.00 | 0.00 | 3.86 |
183 | 184 | 8.141835 | ACATTCAGTTTAAAATTTGTGCTTCC | 57.858 | 30.769 | 0.00 | 0.00 | 0.00 | 3.46 |
184 | 185 | 7.986889 | ACATTCAGTTTAAAATTTGTGCTTCCT | 59.013 | 29.630 | 0.00 | 0.00 | 0.00 | 3.36 |
185 | 186 | 9.474920 | CATTCAGTTTAAAATTTGTGCTTCCTA | 57.525 | 29.630 | 0.00 | 0.00 | 0.00 | 2.94 |
187 | 188 | 9.691362 | TTCAGTTTAAAATTTGTGCTTCCTATC | 57.309 | 29.630 | 0.00 | 0.00 | 0.00 | 2.08 |
188 | 189 | 9.077885 | TCAGTTTAAAATTTGTGCTTCCTATCT | 57.922 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
189 | 190 | 9.132521 | CAGTTTAAAATTTGTGCTTCCTATCTG | 57.867 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
190 | 191 | 8.306761 | AGTTTAAAATTTGTGCTTCCTATCTGG | 58.693 | 33.333 | 0.00 | 0.00 | 37.10 | 3.86 |
191 | 192 | 4.725790 | AAATTTGTGCTTCCTATCTGGC | 57.274 | 40.909 | 0.00 | 0.00 | 35.26 | 4.85 |
192 | 193 | 2.877097 | TTTGTGCTTCCTATCTGGCA | 57.123 | 45.000 | 0.00 | 0.00 | 35.26 | 4.92 |
193 | 194 | 2.877097 | TTGTGCTTCCTATCTGGCAA | 57.123 | 45.000 | 0.00 | 0.00 | 36.43 | 4.52 |
194 | 195 | 2.408271 | TGTGCTTCCTATCTGGCAAG | 57.592 | 50.000 | 0.00 | 0.00 | 36.43 | 4.01 |
195 | 196 | 1.908619 | TGTGCTTCCTATCTGGCAAGA | 59.091 | 47.619 | 0.00 | 0.00 | 36.43 | 3.02 |
196 | 197 | 2.507058 | TGTGCTTCCTATCTGGCAAGAT | 59.493 | 45.455 | 9.05 | 9.05 | 45.42 | 2.40 |
197 | 198 | 3.054139 | TGTGCTTCCTATCTGGCAAGATT | 60.054 | 43.478 | 9.40 | 0.00 | 40.42 | 2.40 |
198 | 199 | 4.164030 | TGTGCTTCCTATCTGGCAAGATTA | 59.836 | 41.667 | 9.40 | 0.00 | 40.42 | 1.75 |
199 | 200 | 5.163163 | TGTGCTTCCTATCTGGCAAGATTAT | 60.163 | 40.000 | 9.40 | 0.00 | 40.42 | 1.28 |
200 | 201 | 5.180868 | GTGCTTCCTATCTGGCAAGATTATG | 59.819 | 44.000 | 9.40 | 0.41 | 40.42 | 1.90 |
201 | 202 | 5.163163 | TGCTTCCTATCTGGCAAGATTATGT | 60.163 | 40.000 | 9.40 | 0.00 | 40.42 | 2.29 |
202 | 203 | 5.411053 | GCTTCCTATCTGGCAAGATTATGTC | 59.589 | 44.000 | 9.40 | 0.00 | 40.42 | 3.06 |
203 | 204 | 6.743773 | GCTTCCTATCTGGCAAGATTATGTCT | 60.744 | 42.308 | 9.40 | 0.00 | 40.42 | 3.41 |
204 | 205 | 6.352016 | TCCTATCTGGCAAGATTATGTCTC | 57.648 | 41.667 | 9.40 | 0.00 | 40.42 | 3.36 |
205 | 206 | 6.080682 | TCCTATCTGGCAAGATTATGTCTCT | 58.919 | 40.000 | 9.40 | 0.00 | 40.42 | 3.10 |
206 | 207 | 6.210385 | TCCTATCTGGCAAGATTATGTCTCTC | 59.790 | 42.308 | 9.40 | 0.00 | 40.42 | 3.20 |
207 | 208 | 6.211184 | CCTATCTGGCAAGATTATGTCTCTCT | 59.789 | 42.308 | 9.40 | 0.00 | 40.42 | 3.10 |
208 | 209 | 7.395772 | CCTATCTGGCAAGATTATGTCTCTCTA | 59.604 | 40.741 | 9.40 | 0.00 | 40.42 | 2.43 |
209 | 210 | 7.795534 | ATCTGGCAAGATTATGTCTCTCTAT | 57.204 | 36.000 | 0.00 | 0.00 | 40.42 | 1.98 |
210 | 211 | 6.990798 | TCTGGCAAGATTATGTCTCTCTATG | 58.009 | 40.000 | 0.00 | 0.00 | 35.67 | 2.23 |
211 | 212 | 6.779539 | TCTGGCAAGATTATGTCTCTCTATGA | 59.220 | 38.462 | 0.00 | 0.00 | 35.67 | 2.15 |
212 | 213 | 7.454066 | TCTGGCAAGATTATGTCTCTCTATGAT | 59.546 | 37.037 | 0.00 | 0.00 | 35.67 | 2.45 |
213 | 214 | 7.384477 | TGGCAAGATTATGTCTCTCTATGATG | 58.616 | 38.462 | 0.00 | 0.00 | 35.67 | 3.07 |
214 | 215 | 6.817641 | GGCAAGATTATGTCTCTCTATGATGG | 59.182 | 42.308 | 0.00 | 0.00 | 35.67 | 3.51 |
215 | 216 | 7.385267 | GCAAGATTATGTCTCTCTATGATGGT | 58.615 | 38.462 | 0.00 | 0.00 | 35.67 | 3.55 |
216 | 217 | 7.331440 | GCAAGATTATGTCTCTCTATGATGGTG | 59.669 | 40.741 | 0.00 | 0.00 | 35.67 | 4.17 |
217 | 218 | 8.366401 | CAAGATTATGTCTCTCTATGATGGTGT | 58.634 | 37.037 | 0.00 | 0.00 | 35.67 | 4.16 |
218 | 219 | 8.121305 | AGATTATGTCTCTCTATGATGGTGTC | 57.879 | 38.462 | 0.00 | 0.00 | 28.45 | 3.67 |
219 | 220 | 7.949565 | AGATTATGTCTCTCTATGATGGTGTCT | 59.050 | 37.037 | 0.00 | 0.00 | 28.45 | 3.41 |
220 | 221 | 7.904558 | TTATGTCTCTCTATGATGGTGTCTT | 57.095 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
221 | 222 | 8.996651 | TTATGTCTCTCTATGATGGTGTCTTA | 57.003 | 34.615 | 0.00 | 0.00 | 0.00 | 2.10 |
222 | 223 | 7.904558 | ATGTCTCTCTATGATGGTGTCTTAA | 57.095 | 36.000 | 0.00 | 0.00 | 0.00 | 1.85 |
223 | 224 | 7.340122 | TGTCTCTCTATGATGGTGTCTTAAG | 57.660 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
224 | 225 | 6.183360 | TGTCTCTCTATGATGGTGTCTTAAGC | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 3.09 |
225 | 226 | 6.040391 | GTCTCTCTATGATGGTGTCTTAAGCT | 59.960 | 42.308 | 0.00 | 0.00 | 0.00 | 3.74 |
226 | 227 | 7.229707 | GTCTCTCTATGATGGTGTCTTAAGCTA | 59.770 | 40.741 | 0.00 | 0.00 | 0.00 | 3.32 |
227 | 228 | 7.229707 | TCTCTCTATGATGGTGTCTTAAGCTAC | 59.770 | 40.741 | 0.00 | 0.00 | 0.00 | 3.58 |
228 | 229 | 7.063593 | TCTCTATGATGGTGTCTTAAGCTACT | 58.936 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
229 | 230 | 7.013750 | TCTCTATGATGGTGTCTTAAGCTACTG | 59.986 | 40.741 | 0.00 | 0.00 | 0.00 | 2.74 |
230 | 231 | 5.939764 | ATGATGGTGTCTTAAGCTACTGA | 57.060 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
231 | 232 | 5.738619 | TGATGGTGTCTTAAGCTACTGAA | 57.261 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
232 | 233 | 6.109156 | TGATGGTGTCTTAAGCTACTGAAA | 57.891 | 37.500 | 0.00 | 0.00 | 0.00 | 2.69 |
233 | 234 | 6.711277 | TGATGGTGTCTTAAGCTACTGAAAT | 58.289 | 36.000 | 0.00 | 0.00 | 0.00 | 2.17 |
234 | 235 | 7.847096 | TGATGGTGTCTTAAGCTACTGAAATA | 58.153 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
235 | 236 | 7.764443 | TGATGGTGTCTTAAGCTACTGAAATAC | 59.236 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
236 | 237 | 7.241042 | TGGTGTCTTAAGCTACTGAAATACT | 57.759 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
237 | 238 | 7.676947 | TGGTGTCTTAAGCTACTGAAATACTT | 58.323 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
238 | 239 | 8.154856 | TGGTGTCTTAAGCTACTGAAATACTTT | 58.845 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
239 | 240 | 9.649167 | GGTGTCTTAAGCTACTGAAATACTTTA | 57.351 | 33.333 | 0.00 | 0.00 | 0.00 | 1.85 |
292 | 293 | 7.858052 | AACGCTATTTTGAAATATAGCATGC | 57.142 | 32.000 | 10.51 | 10.51 | 46.05 | 4.06 |
293 | 294 | 7.206981 | ACGCTATTTTGAAATATAGCATGCT | 57.793 | 32.000 | 25.99 | 25.99 | 46.05 | 3.79 |
294 | 295 | 8.322906 | ACGCTATTTTGAAATATAGCATGCTA | 57.677 | 30.769 | 28.72 | 28.72 | 46.05 | 3.49 |
295 | 296 | 8.950210 | ACGCTATTTTGAAATATAGCATGCTAT | 58.050 | 29.630 | 35.68 | 35.68 | 46.05 | 2.97 |
304 | 305 | 9.559732 | TGAAATATAGCATGCTATAACTTGTGT | 57.440 | 29.630 | 38.09 | 23.42 | 42.57 | 3.72 |
307 | 308 | 8.709386 | ATATAGCATGCTATAACTTGTGTAGC | 57.291 | 34.615 | 38.09 | 1.74 | 44.88 | 3.58 |
314 | 315 | 6.583912 | GCTATAACTTGTGTAGCATTTCGA | 57.416 | 37.500 | 11.18 | 0.00 | 44.25 | 3.71 |
315 | 316 | 6.641062 | GCTATAACTTGTGTAGCATTTCGAG | 58.359 | 40.000 | 11.18 | 0.00 | 44.25 | 4.04 |
316 | 317 | 6.475727 | GCTATAACTTGTGTAGCATTTCGAGA | 59.524 | 38.462 | 11.18 | 0.00 | 44.25 | 4.04 |
317 | 318 | 7.010183 | GCTATAACTTGTGTAGCATTTCGAGAA | 59.990 | 37.037 | 11.18 | 0.00 | 44.25 | 2.87 |
318 | 319 | 5.597813 | AACTTGTGTAGCATTTCGAGAAG | 57.402 | 39.130 | 0.00 | 0.00 | 0.00 | 2.85 |
319 | 320 | 3.997021 | ACTTGTGTAGCATTTCGAGAAGG | 59.003 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
320 | 321 | 2.972625 | TGTGTAGCATTTCGAGAAGGG | 58.027 | 47.619 | 0.00 | 0.00 | 0.00 | 3.95 |
321 | 322 | 1.666189 | GTGTAGCATTTCGAGAAGGGC | 59.334 | 52.381 | 0.00 | 3.61 | 0.00 | 5.19 |
322 | 323 | 1.300481 | GTAGCATTTCGAGAAGGGCC | 58.700 | 55.000 | 0.00 | 0.00 | 0.00 | 5.80 |
323 | 324 | 1.134371 | GTAGCATTTCGAGAAGGGCCT | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
324 | 325 | 0.329596 | AGCATTTCGAGAAGGGCCTT | 59.670 | 50.000 | 21.09 | 21.09 | 0.00 | 4.35 |
325 | 326 | 0.453390 | GCATTTCGAGAAGGGCCTTG | 59.547 | 55.000 | 26.47 | 9.90 | 0.00 | 3.61 |
326 | 327 | 0.453390 | CATTTCGAGAAGGGCCTTGC | 59.547 | 55.000 | 26.47 | 14.45 | 0.00 | 4.01 |
327 | 328 | 0.329596 | ATTTCGAGAAGGGCCTTGCT | 59.670 | 50.000 | 26.47 | 19.69 | 0.00 | 3.91 |
328 | 329 | 0.981183 | TTTCGAGAAGGGCCTTGCTA | 59.019 | 50.000 | 26.47 | 4.62 | 0.00 | 3.49 |
329 | 330 | 1.204146 | TTCGAGAAGGGCCTTGCTAT | 58.796 | 50.000 | 26.47 | 6.55 | 0.00 | 2.97 |
330 | 331 | 2.082140 | TCGAGAAGGGCCTTGCTATA | 57.918 | 50.000 | 26.47 | 9.04 | 0.00 | 1.31 |
331 | 332 | 2.609747 | TCGAGAAGGGCCTTGCTATAT | 58.390 | 47.619 | 26.47 | 0.00 | 0.00 | 0.86 |
332 | 333 | 2.972713 | TCGAGAAGGGCCTTGCTATATT | 59.027 | 45.455 | 26.47 | 0.00 | 0.00 | 1.28 |
333 | 334 | 3.391296 | TCGAGAAGGGCCTTGCTATATTT | 59.609 | 43.478 | 26.47 | 0.00 | 0.00 | 1.40 |
334 | 335 | 4.137543 | CGAGAAGGGCCTTGCTATATTTT | 58.862 | 43.478 | 26.47 | 0.00 | 0.00 | 1.82 |
335 | 336 | 4.023707 | CGAGAAGGGCCTTGCTATATTTTG | 60.024 | 45.833 | 26.47 | 0.00 | 0.00 | 2.44 |
336 | 337 | 4.871822 | AGAAGGGCCTTGCTATATTTTGT | 58.128 | 39.130 | 26.47 | 0.00 | 0.00 | 2.83 |
337 | 338 | 6.013554 | AGAAGGGCCTTGCTATATTTTGTA | 57.986 | 37.500 | 26.47 | 0.00 | 0.00 | 2.41 |
338 | 339 | 6.064717 | AGAAGGGCCTTGCTATATTTTGTAG | 58.935 | 40.000 | 26.47 | 0.00 | 0.00 | 2.74 |
339 | 340 | 4.145052 | AGGGCCTTGCTATATTTTGTAGC | 58.855 | 43.478 | 0.00 | 0.00 | 43.73 | 3.58 |
340 | 341 | 3.058224 | GGGCCTTGCTATATTTTGTAGCG | 60.058 | 47.826 | 0.84 | 0.00 | 45.82 | 4.26 |
341 | 342 | 3.564225 | GGCCTTGCTATATTTTGTAGCGT | 59.436 | 43.478 | 0.00 | 0.00 | 45.82 | 5.07 |
342 | 343 | 4.527564 | GCCTTGCTATATTTTGTAGCGTG | 58.472 | 43.478 | 0.00 | 0.00 | 45.82 | 5.34 |
343 | 344 | 4.527564 | CCTTGCTATATTTTGTAGCGTGC | 58.472 | 43.478 | 0.00 | 0.00 | 45.82 | 5.34 |
344 | 345 | 4.273480 | CCTTGCTATATTTTGTAGCGTGCT | 59.727 | 41.667 | 0.00 | 0.00 | 45.82 | 4.40 |
345 | 346 | 5.465390 | CCTTGCTATATTTTGTAGCGTGCTA | 59.535 | 40.000 | 0.00 | 0.00 | 45.82 | 3.49 |
346 | 347 | 6.147821 | CCTTGCTATATTTTGTAGCGTGCTAT | 59.852 | 38.462 | 4.68 | 0.00 | 45.82 | 2.97 |
347 | 348 | 7.307989 | CCTTGCTATATTTTGTAGCGTGCTATT | 60.308 | 37.037 | 4.68 | 0.00 | 45.82 | 1.73 |
348 | 349 | 7.490962 | TGCTATATTTTGTAGCGTGCTATTT | 57.509 | 32.000 | 4.68 | 0.00 | 45.82 | 1.40 |
349 | 350 | 7.925993 | TGCTATATTTTGTAGCGTGCTATTTT | 58.074 | 30.769 | 4.68 | 0.00 | 45.82 | 1.82 |
350 | 351 | 8.402472 | TGCTATATTTTGTAGCGTGCTATTTTT | 58.598 | 29.630 | 4.68 | 0.00 | 45.82 | 1.94 |
394 | 395 | 7.855784 | TCATATTTATGAGACTAGCAAGGGA | 57.144 | 36.000 | 0.00 | 0.00 | 37.76 | 4.20 |
395 | 396 | 8.441311 | TCATATTTATGAGACTAGCAAGGGAT | 57.559 | 34.615 | 0.00 | 0.00 | 37.76 | 3.85 |
396 | 397 | 9.547279 | TCATATTTATGAGACTAGCAAGGGATA | 57.453 | 33.333 | 0.00 | 0.00 | 37.76 | 2.59 |
397 | 398 | 9.814899 | CATATTTATGAGACTAGCAAGGGATAG | 57.185 | 37.037 | 0.00 | 0.00 | 36.16 | 2.08 |
398 | 399 | 9.775539 | ATATTTATGAGACTAGCAAGGGATAGA | 57.224 | 33.333 | 0.00 | 0.00 | 36.51 | 1.98 |
399 | 400 | 6.902771 | TTATGAGACTAGCAAGGGATAGAC | 57.097 | 41.667 | 0.00 | 0.00 | 36.51 | 2.59 |
400 | 401 | 4.251103 | TGAGACTAGCAAGGGATAGACA | 57.749 | 45.455 | 0.00 | 0.00 | 36.51 | 3.41 |
401 | 402 | 4.809193 | TGAGACTAGCAAGGGATAGACAT | 58.191 | 43.478 | 0.00 | 0.00 | 36.51 | 3.06 |
402 | 403 | 5.211973 | TGAGACTAGCAAGGGATAGACATT | 58.788 | 41.667 | 0.00 | 0.00 | 36.51 | 2.71 |
403 | 404 | 5.303078 | TGAGACTAGCAAGGGATAGACATTC | 59.697 | 44.000 | 0.00 | 0.00 | 36.51 | 2.67 |
404 | 405 | 4.591072 | AGACTAGCAAGGGATAGACATTCC | 59.409 | 45.833 | 0.00 | 0.00 | 36.51 | 3.01 |
405 | 406 | 2.918712 | AGCAAGGGATAGACATTCCG | 57.081 | 50.000 | 0.00 | 0.00 | 34.53 | 4.30 |
406 | 407 | 2.398588 | AGCAAGGGATAGACATTCCGA | 58.601 | 47.619 | 0.00 | 0.00 | 34.53 | 4.55 |
407 | 408 | 2.771943 | AGCAAGGGATAGACATTCCGAA | 59.228 | 45.455 | 0.00 | 0.00 | 34.53 | 4.30 |
408 | 409 | 3.134458 | GCAAGGGATAGACATTCCGAAG | 58.866 | 50.000 | 0.00 | 0.00 | 34.53 | 3.79 |
409 | 410 | 3.181465 | GCAAGGGATAGACATTCCGAAGA | 60.181 | 47.826 | 0.00 | 0.00 | 34.53 | 2.87 |
410 | 411 | 4.683400 | GCAAGGGATAGACATTCCGAAGAA | 60.683 | 45.833 | 0.00 | 0.00 | 34.53 | 2.52 |
411 | 412 | 4.946478 | AGGGATAGACATTCCGAAGAAG | 57.054 | 45.455 | 0.00 | 0.00 | 34.53 | 2.85 |
412 | 413 | 4.547671 | AGGGATAGACATTCCGAAGAAGA | 58.452 | 43.478 | 0.00 | 0.00 | 34.53 | 2.87 |
413 | 414 | 4.962995 | AGGGATAGACATTCCGAAGAAGAA | 59.037 | 41.667 | 0.00 | 0.00 | 34.53 | 2.52 |
414 | 415 | 5.069781 | AGGGATAGACATTCCGAAGAAGAAG | 59.930 | 44.000 | 0.00 | 0.00 | 34.53 | 2.85 |
415 | 416 | 5.069251 | GGGATAGACATTCCGAAGAAGAAGA | 59.931 | 44.000 | 0.00 | 0.00 | 34.86 | 2.87 |
416 | 417 | 6.212955 | GGATAGACATTCCGAAGAAGAAGAG | 58.787 | 44.000 | 0.00 | 0.00 | 34.86 | 2.85 |
417 | 418 | 6.039941 | GGATAGACATTCCGAAGAAGAAGAGA | 59.960 | 42.308 | 0.00 | 0.00 | 34.86 | 3.10 |
418 | 419 | 5.930837 | AGACATTCCGAAGAAGAAGAGAT | 57.069 | 39.130 | 0.00 | 0.00 | 34.86 | 2.75 |
419 | 420 | 5.659463 | AGACATTCCGAAGAAGAAGAGATG | 58.341 | 41.667 | 0.00 | 0.00 | 34.86 | 2.90 |
420 | 421 | 5.420421 | AGACATTCCGAAGAAGAAGAGATGA | 59.580 | 40.000 | 0.00 | 0.00 | 34.86 | 2.92 |
421 | 422 | 5.659463 | ACATTCCGAAGAAGAAGAGATGAG | 58.341 | 41.667 | 0.00 | 0.00 | 34.86 | 2.90 |
422 | 423 | 4.727507 | TTCCGAAGAAGAAGAGATGAGG | 57.272 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
423 | 424 | 3.702792 | TCCGAAGAAGAAGAGATGAGGT | 58.297 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
424 | 425 | 3.445450 | TCCGAAGAAGAAGAGATGAGGTG | 59.555 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
425 | 426 | 3.445450 | CCGAAGAAGAAGAGATGAGGTGA | 59.555 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
426 | 427 | 4.081972 | CCGAAGAAGAAGAGATGAGGTGAA | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
427 | 428 | 5.395103 | CCGAAGAAGAAGAGATGAGGTGAAT | 60.395 | 44.000 | 0.00 | 0.00 | 0.00 | 2.57 |
428 | 429 | 6.105333 | CGAAGAAGAAGAGATGAGGTGAATT | 58.895 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
429 | 430 | 6.593382 | CGAAGAAGAAGAGATGAGGTGAATTT | 59.407 | 38.462 | 0.00 | 0.00 | 0.00 | 1.82 |
430 | 431 | 7.201513 | CGAAGAAGAAGAGATGAGGTGAATTTC | 60.202 | 40.741 | 0.00 | 0.00 | 0.00 | 2.17 |
431 | 432 | 7.256494 | AGAAGAAGAGATGAGGTGAATTTCT | 57.744 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
432 | 433 | 7.104939 | AGAAGAAGAGATGAGGTGAATTTCTG | 58.895 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
433 | 434 | 6.617782 | AGAAGAGATGAGGTGAATTTCTGA | 57.382 | 37.500 | 0.00 | 0.00 | 0.00 | 3.27 |
434 | 435 | 7.013823 | AGAAGAGATGAGGTGAATTTCTGAA | 57.986 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
435 | 436 | 7.104939 | AGAAGAGATGAGGTGAATTTCTGAAG | 58.895 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
436 | 437 | 6.371595 | AGAGATGAGGTGAATTTCTGAAGT | 57.628 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
437 | 438 | 6.777782 | AGAGATGAGGTGAATTTCTGAAGTT | 58.222 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
438 | 439 | 6.878389 | AGAGATGAGGTGAATTTCTGAAGTTC | 59.122 | 38.462 | 16.09 | 16.09 | 0.00 | 3.01 |
439 | 440 | 6.537355 | AGATGAGGTGAATTTCTGAAGTTCA | 58.463 | 36.000 | 20.20 | 20.20 | 0.00 | 3.18 |
440 | 441 | 6.429385 | AGATGAGGTGAATTTCTGAAGTTCAC | 59.571 | 38.462 | 33.16 | 33.16 | 46.73 | 3.18 |
443 | 444 | 4.813296 | GTGAATTTCTGAAGTTCACCGT | 57.187 | 40.909 | 31.96 | 0.81 | 43.55 | 4.83 |
444 | 445 | 4.773510 | GTGAATTTCTGAAGTTCACCGTC | 58.226 | 43.478 | 31.96 | 17.44 | 43.55 | 4.79 |
445 | 446 | 3.813166 | TGAATTTCTGAAGTTCACCGTCC | 59.187 | 43.478 | 20.20 | 0.00 | 0.00 | 4.79 |
446 | 447 | 2.992124 | TTTCTGAAGTTCACCGTCCA | 57.008 | 45.000 | 0.08 | 0.00 | 0.00 | 4.02 |
447 | 448 | 2.992124 | TTCTGAAGTTCACCGTCCAA | 57.008 | 45.000 | 0.08 | 0.00 | 0.00 | 3.53 |
448 | 449 | 3.485463 | TTCTGAAGTTCACCGTCCAAT | 57.515 | 42.857 | 0.08 | 0.00 | 0.00 | 3.16 |
449 | 450 | 3.040147 | TCTGAAGTTCACCGTCCAATC | 57.960 | 47.619 | 0.08 | 0.00 | 0.00 | 2.67 |
450 | 451 | 2.076863 | CTGAAGTTCACCGTCCAATCC | 58.923 | 52.381 | 0.08 | 0.00 | 0.00 | 3.01 |
451 | 452 | 1.418264 | TGAAGTTCACCGTCCAATCCA | 59.582 | 47.619 | 0.08 | 0.00 | 0.00 | 3.41 |
452 | 453 | 2.158740 | TGAAGTTCACCGTCCAATCCAA | 60.159 | 45.455 | 0.08 | 0.00 | 0.00 | 3.53 |
453 | 454 | 2.185004 | AGTTCACCGTCCAATCCAAG | 57.815 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
454 | 455 | 1.420138 | AGTTCACCGTCCAATCCAAGT | 59.580 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
455 | 456 | 2.635915 | AGTTCACCGTCCAATCCAAGTA | 59.364 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
456 | 457 | 3.263425 | AGTTCACCGTCCAATCCAAGTAT | 59.737 | 43.478 | 0.00 | 0.00 | 0.00 | 2.12 |
457 | 458 | 3.536956 | TCACCGTCCAATCCAAGTATC | 57.463 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
458 | 459 | 2.835156 | TCACCGTCCAATCCAAGTATCA | 59.165 | 45.455 | 0.00 | 0.00 | 0.00 | 2.15 |
459 | 460 | 3.262151 | TCACCGTCCAATCCAAGTATCAA | 59.738 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
460 | 461 | 4.006989 | CACCGTCCAATCCAAGTATCAAA | 58.993 | 43.478 | 0.00 | 0.00 | 0.00 | 2.69 |
461 | 462 | 4.640201 | CACCGTCCAATCCAAGTATCAAAT | 59.360 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
462 | 463 | 4.640201 | ACCGTCCAATCCAAGTATCAAATG | 59.360 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
463 | 464 | 4.640201 | CCGTCCAATCCAAGTATCAAATGT | 59.360 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
464 | 465 | 5.449041 | CCGTCCAATCCAAGTATCAAATGTG | 60.449 | 44.000 | 0.00 | 0.00 | 0.00 | 3.21 |
465 | 466 | 5.353956 | CGTCCAATCCAAGTATCAAATGTGA | 59.646 | 40.000 | 0.00 | 0.00 | 38.41 | 3.58 |
466 | 467 | 6.457392 | CGTCCAATCCAAGTATCAAATGTGAG | 60.457 | 42.308 | 0.00 | 0.00 | 37.14 | 3.51 |
467 | 468 | 6.599244 | GTCCAATCCAAGTATCAAATGTGAGA | 59.401 | 38.462 | 0.00 | 0.00 | 37.14 | 3.27 |
468 | 469 | 7.121168 | GTCCAATCCAAGTATCAAATGTGAGAA | 59.879 | 37.037 | 0.00 | 0.00 | 37.14 | 2.87 |
469 | 470 | 7.835682 | TCCAATCCAAGTATCAAATGTGAGAAT | 59.164 | 33.333 | 0.00 | 0.00 | 37.14 | 2.40 |
470 | 471 | 8.472413 | CCAATCCAAGTATCAAATGTGAGAATT | 58.528 | 33.333 | 0.00 | 0.00 | 33.81 | 2.17 |
473 | 474 | 9.911788 | ATCCAAGTATCAAATGTGAGAATTACT | 57.088 | 29.630 | 0.00 | 0.00 | 31.33 | 2.24 |
478 | 479 | 9.836864 | AGTATCAAATGTGAGAATTACTATGCA | 57.163 | 29.630 | 0.00 | 0.00 | 37.14 | 3.96 |
482 | 483 | 9.276590 | TCAAATGTGAGAATTACTATGCATAGG | 57.723 | 33.333 | 31.87 | 17.22 | 34.69 | 2.57 |
483 | 484 | 8.509690 | CAAATGTGAGAATTACTATGCATAGGG | 58.490 | 37.037 | 31.87 | 13.99 | 34.69 | 3.53 |
484 | 485 | 6.994421 | TGTGAGAATTACTATGCATAGGGA | 57.006 | 37.500 | 31.87 | 21.76 | 34.69 | 4.20 |
485 | 486 | 6.759272 | TGTGAGAATTACTATGCATAGGGAC | 58.241 | 40.000 | 31.87 | 19.36 | 34.69 | 4.46 |
486 | 487 | 6.326323 | TGTGAGAATTACTATGCATAGGGACA | 59.674 | 38.462 | 31.87 | 19.44 | 34.69 | 4.02 |
487 | 488 | 7.147567 | TGTGAGAATTACTATGCATAGGGACAA | 60.148 | 37.037 | 31.87 | 21.06 | 34.69 | 3.18 |
488 | 489 | 7.715249 | GTGAGAATTACTATGCATAGGGACAAA | 59.285 | 37.037 | 31.87 | 19.30 | 34.69 | 2.83 |
489 | 490 | 7.933577 | TGAGAATTACTATGCATAGGGACAAAG | 59.066 | 37.037 | 31.87 | 12.27 | 34.69 | 2.77 |
490 | 491 | 8.034313 | AGAATTACTATGCATAGGGACAAAGA | 57.966 | 34.615 | 31.87 | 12.42 | 34.69 | 2.52 |
491 | 492 | 8.494433 | AGAATTACTATGCATAGGGACAAAGAA | 58.506 | 33.333 | 31.87 | 15.26 | 34.69 | 2.52 |
492 | 493 | 9.289782 | GAATTACTATGCATAGGGACAAAGAAT | 57.710 | 33.333 | 31.87 | 16.46 | 34.69 | 2.40 |
493 | 494 | 9.646522 | AATTACTATGCATAGGGACAAAGAATT | 57.353 | 29.630 | 31.87 | 19.91 | 34.69 | 2.17 |
496 | 497 | 8.451908 | ACTATGCATAGGGACAAAGAATTAAC | 57.548 | 34.615 | 31.87 | 0.00 | 34.69 | 2.01 |
497 | 498 | 8.275040 | ACTATGCATAGGGACAAAGAATTAACT | 58.725 | 33.333 | 31.87 | 7.11 | 34.69 | 2.24 |
498 | 499 | 7.961326 | ATGCATAGGGACAAAGAATTAACTT | 57.039 | 32.000 | 0.00 | 0.00 | 0.00 | 2.66 |
499 | 500 | 7.156876 | TGCATAGGGACAAAGAATTAACTTG | 57.843 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
500 | 501 | 6.719370 | TGCATAGGGACAAAGAATTAACTTGT | 59.281 | 34.615 | 0.25 | 0.25 | 0.00 | 3.16 |
501 | 502 | 7.232534 | TGCATAGGGACAAAGAATTAACTTGTT | 59.767 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
502 | 503 | 8.736244 | GCATAGGGACAAAGAATTAACTTGTTA | 58.264 | 33.333 | 1.98 | 0.00 | 0.00 | 2.41 |
505 | 506 | 8.528044 | AGGGACAAAGAATTAACTTGTTAACA | 57.472 | 30.769 | 3.59 | 3.59 | 0.00 | 2.41 |
506 | 507 | 8.973182 | AGGGACAAAGAATTAACTTGTTAACAA | 58.027 | 29.630 | 19.53 | 19.53 | 0.00 | 2.83 |
507 | 508 | 9.589111 | GGGACAAAGAATTAACTTGTTAACAAA | 57.411 | 29.630 | 20.89 | 7.62 | 35.15 | 2.83 |
542 | 543 | 7.462571 | ACTAGCTACTTTTTGTAAAATGGGG | 57.537 | 36.000 | 0.00 | 2.51 | 0.00 | 4.96 |
543 | 544 | 7.235804 | ACTAGCTACTTTTTGTAAAATGGGGA | 58.764 | 34.615 | 0.00 | 0.00 | 0.00 | 4.81 |
544 | 545 | 7.893833 | ACTAGCTACTTTTTGTAAAATGGGGAT | 59.106 | 33.333 | 0.00 | 2.67 | 0.00 | 3.85 |
545 | 546 | 6.935167 | AGCTACTTTTTGTAAAATGGGGATG | 58.065 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
546 | 547 | 6.496911 | AGCTACTTTTTGTAAAATGGGGATGT | 59.503 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
547 | 548 | 6.589907 | GCTACTTTTTGTAAAATGGGGATGTG | 59.410 | 38.462 | 7.57 | 0.00 | 0.00 | 3.21 |
548 | 549 | 5.863965 | ACTTTTTGTAAAATGGGGATGTGG | 58.136 | 37.500 | 7.57 | 0.00 | 0.00 | 4.17 |
549 | 550 | 5.604650 | ACTTTTTGTAAAATGGGGATGTGGA | 59.395 | 36.000 | 7.57 | 0.00 | 0.00 | 4.02 |
550 | 551 | 5.476091 | TTTTGTAAAATGGGGATGTGGAC | 57.524 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
551 | 552 | 3.094484 | TGTAAAATGGGGATGTGGACC | 57.906 | 47.619 | 0.00 | 0.00 | 0.00 | 4.46 |
552 | 553 | 2.021457 | GTAAAATGGGGATGTGGACCG | 58.979 | 52.381 | 0.00 | 0.00 | 0.00 | 4.79 |
553 | 554 | 0.324275 | AAAATGGGGATGTGGACCGG | 60.324 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
554 | 555 | 1.211567 | AAATGGGGATGTGGACCGGA | 61.212 | 55.000 | 9.46 | 0.00 | 0.00 | 5.14 |
555 | 556 | 1.635817 | AATGGGGATGTGGACCGGAG | 61.636 | 60.000 | 9.46 | 0.00 | 0.00 | 4.63 |
556 | 557 | 2.365105 | GGGGATGTGGACCGGAGA | 60.365 | 66.667 | 9.46 | 0.00 | 0.00 | 3.71 |
557 | 558 | 2.435693 | GGGGATGTGGACCGGAGAG | 61.436 | 68.421 | 9.46 | 0.00 | 0.00 | 3.20 |
559 | 560 | 2.435693 | GGATGTGGACCGGAGAGGG | 61.436 | 68.421 | 9.46 | 0.00 | 46.96 | 4.30 |
560 | 561 | 2.365635 | ATGTGGACCGGAGAGGGG | 60.366 | 66.667 | 9.46 | 0.00 | 46.96 | 4.79 |
561 | 562 | 4.715130 | TGTGGACCGGAGAGGGGG | 62.715 | 72.222 | 9.46 | 0.00 | 46.96 | 5.40 |
565 | 566 | 3.787001 | GACCGGAGAGGGGGCTTG | 61.787 | 72.222 | 9.46 | 0.00 | 46.96 | 4.01 |
566 | 567 | 4.332543 | ACCGGAGAGGGGGCTTGA | 62.333 | 66.667 | 9.46 | 0.00 | 46.96 | 3.02 |
567 | 568 | 3.474570 | CCGGAGAGGGGGCTTGAG | 61.475 | 72.222 | 0.00 | 0.00 | 35.97 | 3.02 |
568 | 569 | 2.364317 | CGGAGAGGGGGCTTGAGA | 60.364 | 66.667 | 0.00 | 0.00 | 0.00 | 3.27 |
569 | 570 | 2.430610 | CGGAGAGGGGGCTTGAGAG | 61.431 | 68.421 | 0.00 | 0.00 | 0.00 | 3.20 |
570 | 571 | 1.002274 | GGAGAGGGGGCTTGAGAGA | 59.998 | 63.158 | 0.00 | 0.00 | 0.00 | 3.10 |
571 | 572 | 0.399806 | GGAGAGGGGGCTTGAGAGAT | 60.400 | 60.000 | 0.00 | 0.00 | 0.00 | 2.75 |
572 | 573 | 0.758123 | GAGAGGGGGCTTGAGAGATG | 59.242 | 60.000 | 0.00 | 0.00 | 0.00 | 2.90 |
573 | 574 | 1.148048 | GAGGGGGCTTGAGAGATGC | 59.852 | 63.158 | 0.00 | 0.00 | 0.00 | 3.91 |
574 | 575 | 1.307691 | AGGGGGCTTGAGAGATGCT | 60.308 | 57.895 | 0.00 | 0.00 | 0.00 | 3.79 |
575 | 576 | 0.918310 | AGGGGGCTTGAGAGATGCTT | 60.918 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
576 | 577 | 0.839946 | GGGGGCTTGAGAGATGCTTA | 59.160 | 55.000 | 0.00 | 0.00 | 0.00 | 3.09 |
577 | 578 | 1.423161 | GGGGGCTTGAGAGATGCTTAT | 59.577 | 52.381 | 0.00 | 0.00 | 0.00 | 1.73 |
578 | 579 | 2.158549 | GGGGGCTTGAGAGATGCTTATT | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
579 | 580 | 3.073062 | GGGGGCTTGAGAGATGCTTATTA | 59.927 | 47.826 | 0.00 | 0.00 | 0.00 | 0.98 |
580 | 581 | 4.322567 | GGGGCTTGAGAGATGCTTATTAG | 58.677 | 47.826 | 0.00 | 0.00 | 0.00 | 1.73 |
581 | 582 | 4.322567 | GGGCTTGAGAGATGCTTATTAGG | 58.677 | 47.826 | 0.00 | 0.00 | 0.00 | 2.69 |
582 | 583 | 3.750652 | GGCTTGAGAGATGCTTATTAGGC | 59.249 | 47.826 | 0.00 | 0.00 | 0.00 | 3.93 |
583 | 584 | 4.504689 | GGCTTGAGAGATGCTTATTAGGCT | 60.505 | 45.833 | 0.00 | 0.00 | 0.00 | 4.58 |
584 | 585 | 5.279708 | GGCTTGAGAGATGCTTATTAGGCTA | 60.280 | 44.000 | 0.00 | 0.00 | 0.00 | 3.93 |
585 | 586 | 5.868801 | GCTTGAGAGATGCTTATTAGGCTAG | 59.131 | 44.000 | 0.00 | 0.00 | 0.00 | 3.42 |
586 | 587 | 6.295011 | GCTTGAGAGATGCTTATTAGGCTAGA | 60.295 | 42.308 | 0.00 | 0.00 | 0.00 | 2.43 |
587 | 588 | 6.832520 | TGAGAGATGCTTATTAGGCTAGAG | 57.167 | 41.667 | 0.00 | 0.00 | 0.00 | 2.43 |
588 | 589 | 5.714333 | TGAGAGATGCTTATTAGGCTAGAGG | 59.286 | 44.000 | 0.00 | 0.00 | 0.00 | 3.69 |
589 | 590 | 5.650283 | AGAGATGCTTATTAGGCTAGAGGT | 58.350 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
590 | 591 | 5.480073 | AGAGATGCTTATTAGGCTAGAGGTG | 59.520 | 44.000 | 0.00 | 0.00 | 0.00 | 4.00 |
591 | 592 | 5.151454 | AGATGCTTATTAGGCTAGAGGTGT | 58.849 | 41.667 | 0.00 | 0.00 | 0.00 | 4.16 |
592 | 593 | 6.315714 | AGATGCTTATTAGGCTAGAGGTGTA | 58.684 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
593 | 594 | 6.957020 | AGATGCTTATTAGGCTAGAGGTGTAT | 59.043 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
594 | 595 | 6.346477 | TGCTTATTAGGCTAGAGGTGTATG | 57.654 | 41.667 | 0.00 | 0.00 | 0.00 | 2.39 |
595 | 596 | 6.075315 | TGCTTATTAGGCTAGAGGTGTATGA | 58.925 | 40.000 | 0.00 | 0.00 | 0.00 | 2.15 |
596 | 597 | 6.726299 | TGCTTATTAGGCTAGAGGTGTATGAT | 59.274 | 38.462 | 0.00 | 0.00 | 0.00 | 2.45 |
597 | 598 | 7.235606 | TGCTTATTAGGCTAGAGGTGTATGATT | 59.764 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
598 | 599 | 8.097662 | GCTTATTAGGCTAGAGGTGTATGATTT | 58.902 | 37.037 | 0.00 | 0.00 | 0.00 | 2.17 |
604 | 605 | 5.880332 | GGCTAGAGGTGTATGATTTTTCACA | 59.120 | 40.000 | 0.00 | 0.00 | 33.17 | 3.58 |
615 | 616 | 5.611796 | TGATTTTTCACAGATTGACTCCG | 57.388 | 39.130 | 0.00 | 0.00 | 32.26 | 4.63 |
622 | 623 | 1.420138 | ACAGATTGACTCCGTGGGTTT | 59.580 | 47.619 | 0.00 | 0.00 | 0.00 | 3.27 |
624 | 625 | 3.263425 | ACAGATTGACTCCGTGGGTTTAT | 59.737 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
635 | 636 | 4.124238 | CCGTGGGTTTATCGTCACAATAT | 58.876 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
636 | 637 | 5.068855 | TCCGTGGGTTTATCGTCACAATATA | 59.931 | 40.000 | 0.00 | 0.00 | 0.00 | 0.86 |
650 | 651 | 9.982291 | TCGTCACAATATACTTTCTTTTTATGC | 57.018 | 29.630 | 0.00 | 0.00 | 0.00 | 3.14 |
651 | 652 | 9.988350 | CGTCACAATATACTTTCTTTTTATGCT | 57.012 | 29.630 | 0.00 | 0.00 | 0.00 | 3.79 |
725 | 733 | 2.874086 | GGTATTAATTTGGGTCCGTCCG | 59.126 | 50.000 | 0.00 | 0.00 | 37.00 | 4.79 |
754 | 763 | 3.487574 | CGTCGCACCTTTTTGCAAAATAA | 59.512 | 39.130 | 24.39 | 10.51 | 43.15 | 1.40 |
757 | 766 | 4.688413 | TCGCACCTTTTTGCAAAATAATCC | 59.312 | 37.500 | 24.39 | 12.41 | 43.15 | 3.01 |
772 | 781 | 7.761249 | GCAAAATAATCCTGCTGTTTTCACTAT | 59.239 | 33.333 | 0.00 | 0.00 | 33.20 | 2.12 |
778 | 787 | 4.518970 | TCCTGCTGTTTTCACTATTCAACC | 59.481 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
788 | 797 | 2.167693 | CACTATTCAACCCGCACTCCTA | 59.832 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
789 | 798 | 2.431057 | ACTATTCAACCCGCACTCCTAG | 59.569 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
803 | 812 | 4.150098 | GCACTCCTAGTAAAAAGTCACACG | 59.850 | 45.833 | 0.00 | 0.00 | 0.00 | 4.49 |
807 | 816 | 6.152932 | TCCTAGTAAAAAGTCACACGAACT | 57.847 | 37.500 | 0.00 | 0.00 | 0.00 | 3.01 |
812 | 821 | 4.870221 | AAAAAGTCACACGAACTGGTAC | 57.130 | 40.909 | 0.00 | 0.00 | 0.00 | 3.34 |
832 | 844 | 3.053455 | ACGTGCGAGAGAAAAGAAGAAG | 58.947 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
837 | 849 | 6.487103 | GTGCGAGAGAAAAGAAGAAGAAAAA | 58.513 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
838 | 850 | 7.135467 | GTGCGAGAGAAAAGAAGAAGAAAAAT | 58.865 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
974 | 986 | 1.757340 | GCGCCTCTACCACCTACCT | 60.757 | 63.158 | 0.00 | 0.00 | 0.00 | 3.08 |
1048 | 1060 | 3.637273 | GGCAGGTGGTTCTCCCGT | 61.637 | 66.667 | 0.00 | 0.00 | 35.15 | 5.28 |
1063 | 1085 | 1.215655 | CCCGTTCGATCCGATCAAGC | 61.216 | 60.000 | 9.07 | 0.00 | 35.23 | 4.01 |
1191 | 1268 | 1.875963 | CGGCACCATGGTTGTTCTC | 59.124 | 57.895 | 16.84 | 0.09 | 0.00 | 2.87 |
1194 | 1271 | 1.514678 | GCACCATGGTTGTTCTCGCA | 61.515 | 55.000 | 16.84 | 0.00 | 0.00 | 5.10 |
1266 | 1363 | 0.615261 | GGAGAGAAACGAGGGGAGGT | 60.615 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
1360 | 1469 | 2.989639 | CCGAGTGGCCAGATCCAA | 59.010 | 61.111 | 5.11 | 0.00 | 37.96 | 3.53 |
1363 | 1472 | 0.824109 | CGAGTGGCCAGATCCAACTA | 59.176 | 55.000 | 5.11 | 0.00 | 37.96 | 2.24 |
1427 | 1536 | 2.202810 | GCTGCCACTCTAGCGGTC | 60.203 | 66.667 | 0.00 | 0.00 | 38.92 | 4.79 |
1428 | 1537 | 2.716017 | GCTGCCACTCTAGCGGTCT | 61.716 | 63.158 | 0.00 | 0.00 | 38.92 | 3.85 |
1429 | 1538 | 1.384989 | GCTGCCACTCTAGCGGTCTA | 61.385 | 60.000 | 0.00 | 0.00 | 38.92 | 2.59 |
1430 | 1539 | 0.665835 | CTGCCACTCTAGCGGTCTAG | 59.334 | 60.000 | 0.00 | 0.00 | 42.87 | 2.43 |
1431 | 1540 | 1.360911 | GCCACTCTAGCGGTCTAGC | 59.639 | 63.158 | 0.00 | 0.00 | 41.59 | 3.42 |
1761 | 2190 | 4.801147 | TGCAATATTTAGCAGAGAAGCG | 57.199 | 40.909 | 0.00 | 0.00 | 40.15 | 4.68 |
1800 | 2229 | 9.231297 | CACTAATATTGGTTTTCCTTCTCTTCA | 57.769 | 33.333 | 1.04 | 0.00 | 41.38 | 3.02 |
1866 | 2295 | 2.371841 | TGTGTAGTTGTTGCCTCCAGAT | 59.628 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
1881 | 2310 | 1.609555 | CCAGATACTCTCCTACGGCAC | 59.390 | 57.143 | 0.00 | 0.00 | 0.00 | 5.01 |
1901 | 2330 | 2.547640 | GATGCTCCTGCTTCCCTGCA | 62.548 | 60.000 | 0.00 | 0.00 | 41.05 | 4.41 |
2014 | 2450 | 1.996191 | GCTACACGAAGAAAGAGCAGG | 59.004 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
2022 | 2458 | 4.253685 | CGAAGAAAGAGCAGGGATAAACA | 58.746 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
2024 | 2460 | 3.956744 | AGAAAGAGCAGGGATAAACACC | 58.043 | 45.455 | 0.00 | 0.00 | 0.00 | 4.16 |
2025 | 2461 | 3.330701 | AGAAAGAGCAGGGATAAACACCA | 59.669 | 43.478 | 0.00 | 0.00 | 0.00 | 4.17 |
2026 | 2462 | 4.018050 | AGAAAGAGCAGGGATAAACACCAT | 60.018 | 41.667 | 0.00 | 0.00 | 0.00 | 3.55 |
2027 | 2463 | 4.322057 | AAGAGCAGGGATAAACACCATT | 57.678 | 40.909 | 0.00 | 0.00 | 0.00 | 3.16 |
2028 | 2464 | 4.322057 | AGAGCAGGGATAAACACCATTT | 57.678 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
2218 | 2663 | 3.355626 | TCTCTCACACACACTCTTTCG | 57.644 | 47.619 | 0.00 | 0.00 | 0.00 | 3.46 |
2283 | 2736 | 4.640647 | TCTCTCTAACACACGCACATATCT | 59.359 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
2385 | 2844 | 1.698506 | TTGCAACCACAACTAAGGGG | 58.301 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2484 | 2970 | 7.161404 | TGTAATATGCTCTCTCTCTCTCTCTC | 58.839 | 42.308 | 0.00 | 0.00 | 0.00 | 3.20 |
2625 | 5194 | 1.296392 | CTTGAGTCCATGTCCGCCA | 59.704 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
3196 | 5780 | 6.427974 | CGTGTTGCTTCTAGTAGATCGATAA | 58.572 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
3245 | 5829 | 5.699458 | ACGTCCAATCTATTCGAGTGTTTTT | 59.301 | 36.000 | 0.00 | 0.00 | 36.02 | 1.94 |
3380 | 5973 | 0.321122 | CGGCAACAAGGAGAAGAGCT | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
3451 | 6044 | 3.692406 | GCCGACAGTCCCGACCTT | 61.692 | 66.667 | 0.00 | 0.00 | 0.00 | 3.50 |
3768 | 6376 | 2.294078 | GCTGCCCACCTACTGGTCT | 61.294 | 63.158 | 0.00 | 0.00 | 46.60 | 3.85 |
4438 | 7052 | 1.354155 | CCACGATACTCGCACGCTA | 59.646 | 57.895 | 0.00 | 0.00 | 45.12 | 4.26 |
5116 | 7740 | 8.195165 | AGATTCTACACTAATATAGCAAGGCA | 57.805 | 34.615 | 0.00 | 0.00 | 0.00 | 4.75 |
5119 | 7743 | 8.662781 | TTCTACACTAATATAGCAAGGCAAAG | 57.337 | 34.615 | 0.00 | 0.00 | 0.00 | 2.77 |
5164 | 7788 | 8.272889 | TCACTGATAGAAGTACTGGTGTATACT | 58.727 | 37.037 | 4.17 | 0.00 | 32.93 | 2.12 |
5169 | 7793 | 6.621316 | AGAAGTACTGGTGTATACTCATCG | 57.379 | 41.667 | 4.17 | 0.00 | 31.15 | 3.84 |
5192 | 7816 | 6.094325 | TCGAAGGTACACAATGAACTTTTTGT | 59.906 | 34.615 | 0.00 | 0.00 | 36.53 | 2.83 |
5254 | 7878 | 4.929808 | GTGATATACGCCCATCTCGAATTT | 59.070 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
5268 | 7892 | 8.552034 | CCATCTCGAATTTCATTTTAGGTCTAC | 58.448 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
5440 | 8066 | 9.717942 | AGAGGAGATAGTTATACAATTCATTGC | 57.282 | 33.333 | 0.00 | 0.00 | 41.38 | 3.56 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 4.923893 | ACGCTACATGCTACAACGTTATA | 58.076 | 39.130 | 0.00 | 0.00 | 40.11 | 0.98 |
2 | 3 | 3.220507 | ACGCTACATGCTACAACGTTA | 57.779 | 42.857 | 0.00 | 0.00 | 40.11 | 3.18 |
3 | 4 | 2.074547 | ACGCTACATGCTACAACGTT | 57.925 | 45.000 | 0.00 | 0.00 | 40.11 | 3.99 |
4 | 5 | 2.074547 | AACGCTACATGCTACAACGT | 57.925 | 45.000 | 0.00 | 0.00 | 40.11 | 3.99 |
5 | 6 | 5.606726 | CGTTATAACGCTACATGCTACAACG | 60.607 | 44.000 | 23.72 | 0.00 | 46.06 | 4.10 |
6 | 7 | 5.653657 | CGTTATAACGCTACATGCTACAAC | 58.346 | 41.667 | 23.72 | 0.00 | 46.06 | 3.32 |
7 | 8 | 5.876576 | CGTTATAACGCTACATGCTACAA | 57.123 | 39.130 | 23.72 | 0.00 | 46.06 | 2.41 |
41 | 42 | 9.875691 | GTGCTTCCCTATTTTTCTGATATTTTT | 57.124 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
42 | 43 | 9.034800 | TGTGCTTCCCTATTTTTCTGATATTTT | 57.965 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
43 | 44 | 8.593945 | TGTGCTTCCCTATTTTTCTGATATTT | 57.406 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
44 | 45 | 8.593945 | TTGTGCTTCCCTATTTTTCTGATATT | 57.406 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
45 | 46 | 7.836183 | ACTTGTGCTTCCCTATTTTTCTGATAT | 59.164 | 33.333 | 0.00 | 0.00 | 0.00 | 1.63 |
46 | 47 | 7.175104 | ACTTGTGCTTCCCTATTTTTCTGATA | 58.825 | 34.615 | 0.00 | 0.00 | 0.00 | 2.15 |
47 | 48 | 6.012745 | ACTTGTGCTTCCCTATTTTTCTGAT | 58.987 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
48 | 49 | 5.385198 | ACTTGTGCTTCCCTATTTTTCTGA | 58.615 | 37.500 | 0.00 | 0.00 | 0.00 | 3.27 |
49 | 50 | 5.712152 | ACTTGTGCTTCCCTATTTTTCTG | 57.288 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
50 | 51 | 6.731292 | AAACTTGTGCTTCCCTATTTTTCT | 57.269 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
51 | 52 | 7.658261 | AGTAAACTTGTGCTTCCCTATTTTTC | 58.342 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
52 | 53 | 7.597288 | AGTAAACTTGTGCTTCCCTATTTTT | 57.403 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
53 | 54 | 7.597288 | AAGTAAACTTGTGCTTCCCTATTTT | 57.403 | 32.000 | 0.00 | 0.00 | 34.38 | 1.82 |
54 | 55 | 7.505923 | AGAAAGTAAACTTGTGCTTCCCTATTT | 59.494 | 33.333 | 0.00 | 0.00 | 36.12 | 1.40 |
55 | 56 | 7.004691 | AGAAAGTAAACTTGTGCTTCCCTATT | 58.995 | 34.615 | 0.00 | 0.00 | 36.12 | 1.73 |
56 | 57 | 6.431234 | CAGAAAGTAAACTTGTGCTTCCCTAT | 59.569 | 38.462 | 0.00 | 0.00 | 36.12 | 2.57 |
57 | 58 | 5.763204 | CAGAAAGTAAACTTGTGCTTCCCTA | 59.237 | 40.000 | 0.00 | 0.00 | 36.12 | 3.53 |
58 | 59 | 4.580580 | CAGAAAGTAAACTTGTGCTTCCCT | 59.419 | 41.667 | 0.00 | 0.00 | 36.12 | 4.20 |
59 | 60 | 4.261614 | CCAGAAAGTAAACTTGTGCTTCCC | 60.262 | 45.833 | 0.00 | 0.00 | 36.12 | 3.97 |
60 | 61 | 4.338400 | ACCAGAAAGTAAACTTGTGCTTCC | 59.662 | 41.667 | 0.00 | 0.00 | 36.12 | 3.46 |
61 | 62 | 5.500645 | ACCAGAAAGTAAACTTGTGCTTC | 57.499 | 39.130 | 0.00 | 0.00 | 36.12 | 3.86 |
62 | 63 | 5.914898 | AACCAGAAAGTAAACTTGTGCTT | 57.085 | 34.783 | 0.00 | 0.00 | 36.12 | 3.91 |
63 | 64 | 7.425606 | CAATAACCAGAAAGTAAACTTGTGCT | 58.574 | 34.615 | 0.00 | 0.00 | 36.12 | 4.40 |
64 | 65 | 6.143919 | GCAATAACCAGAAAGTAAACTTGTGC | 59.856 | 38.462 | 0.00 | 0.00 | 36.12 | 4.57 |
65 | 66 | 7.167468 | GTGCAATAACCAGAAAGTAAACTTGTG | 59.833 | 37.037 | 0.00 | 0.00 | 36.12 | 3.33 |
66 | 67 | 7.200455 | GTGCAATAACCAGAAAGTAAACTTGT | 58.800 | 34.615 | 0.00 | 0.00 | 36.12 | 3.16 |
67 | 68 | 6.359617 | CGTGCAATAACCAGAAAGTAAACTTG | 59.640 | 38.462 | 0.00 | 0.00 | 36.12 | 3.16 |
68 | 69 | 6.435428 | CGTGCAATAACCAGAAAGTAAACTT | 58.565 | 36.000 | 0.00 | 0.00 | 37.91 | 2.66 |
69 | 70 | 5.048991 | CCGTGCAATAACCAGAAAGTAAACT | 60.049 | 40.000 | 0.00 | 0.00 | 0.00 | 2.66 |
70 | 71 | 5.151389 | CCGTGCAATAACCAGAAAGTAAAC | 58.849 | 41.667 | 0.00 | 0.00 | 0.00 | 2.01 |
71 | 72 | 4.822896 | ACCGTGCAATAACCAGAAAGTAAA | 59.177 | 37.500 | 0.00 | 0.00 | 0.00 | 2.01 |
72 | 73 | 4.391155 | ACCGTGCAATAACCAGAAAGTAA | 58.609 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
73 | 74 | 4.010667 | ACCGTGCAATAACCAGAAAGTA | 57.989 | 40.909 | 0.00 | 0.00 | 0.00 | 2.24 |
74 | 75 | 2.858745 | ACCGTGCAATAACCAGAAAGT | 58.141 | 42.857 | 0.00 | 0.00 | 0.00 | 2.66 |
75 | 76 | 4.250464 | TCTACCGTGCAATAACCAGAAAG | 58.750 | 43.478 | 0.00 | 0.00 | 0.00 | 2.62 |
76 | 77 | 4.274602 | TCTACCGTGCAATAACCAGAAA | 57.725 | 40.909 | 0.00 | 0.00 | 0.00 | 2.52 |
77 | 78 | 3.965379 | TCTACCGTGCAATAACCAGAA | 57.035 | 42.857 | 0.00 | 0.00 | 0.00 | 3.02 |
78 | 79 | 3.196901 | ACATCTACCGTGCAATAACCAGA | 59.803 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
79 | 80 | 3.531538 | ACATCTACCGTGCAATAACCAG | 58.468 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
80 | 81 | 3.620427 | ACATCTACCGTGCAATAACCA | 57.380 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
81 | 82 | 4.056050 | CCTACATCTACCGTGCAATAACC | 58.944 | 47.826 | 0.00 | 0.00 | 0.00 | 2.85 |
82 | 83 | 3.493503 | GCCTACATCTACCGTGCAATAAC | 59.506 | 47.826 | 0.00 | 0.00 | 0.00 | 1.89 |
83 | 84 | 3.386726 | AGCCTACATCTACCGTGCAATAA | 59.613 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
84 | 85 | 2.963101 | AGCCTACATCTACCGTGCAATA | 59.037 | 45.455 | 0.00 | 0.00 | 0.00 | 1.90 |
85 | 86 | 1.762957 | AGCCTACATCTACCGTGCAAT | 59.237 | 47.619 | 0.00 | 0.00 | 0.00 | 3.56 |
86 | 87 | 1.136305 | GAGCCTACATCTACCGTGCAA | 59.864 | 52.381 | 0.00 | 0.00 | 0.00 | 4.08 |
87 | 88 | 0.744874 | GAGCCTACATCTACCGTGCA | 59.255 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
88 | 89 | 0.317938 | CGAGCCTACATCTACCGTGC | 60.318 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
89 | 90 | 1.306148 | TCGAGCCTACATCTACCGTG | 58.694 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
90 | 91 | 1.880675 | CATCGAGCCTACATCTACCGT | 59.119 | 52.381 | 0.00 | 0.00 | 0.00 | 4.83 |
91 | 92 | 1.401670 | GCATCGAGCCTACATCTACCG | 60.402 | 57.143 | 0.00 | 0.00 | 37.23 | 4.02 |
92 | 93 | 2.355717 | GCATCGAGCCTACATCTACC | 57.644 | 55.000 | 0.00 | 0.00 | 37.23 | 3.18 |
103 | 104 | 0.997932 | CTGAACACTGAGCATCGAGC | 59.002 | 55.000 | 0.00 | 0.00 | 46.19 | 5.03 |
104 | 105 | 2.094803 | ACTCTGAACACTGAGCATCGAG | 60.095 | 50.000 | 0.00 | 0.00 | 38.61 | 4.04 |
105 | 106 | 1.889170 | ACTCTGAACACTGAGCATCGA | 59.111 | 47.619 | 0.00 | 0.00 | 38.61 | 3.59 |
106 | 107 | 2.360553 | ACTCTGAACACTGAGCATCG | 57.639 | 50.000 | 0.00 | 0.00 | 38.61 | 3.84 |
107 | 108 | 9.703892 | ATATATTAACTCTGAACACTGAGCATC | 57.296 | 33.333 | 0.00 | 0.00 | 34.47 | 3.91 |
108 | 109 | 9.486497 | CATATATTAACTCTGAACACTGAGCAT | 57.514 | 33.333 | 0.00 | 0.00 | 34.47 | 3.79 |
109 | 110 | 8.478066 | ACATATATTAACTCTGAACACTGAGCA | 58.522 | 33.333 | 0.00 | 0.00 | 34.47 | 4.26 |
110 | 111 | 8.879342 | ACATATATTAACTCTGAACACTGAGC | 57.121 | 34.615 | 0.00 | 0.00 | 34.47 | 4.26 |
140 | 141 | 9.725019 | ACTGAATGTCAAATTGTAGTCAATCTA | 57.275 | 29.630 | 0.00 | 0.00 | 42.60 | 1.98 |
141 | 142 | 8.627208 | ACTGAATGTCAAATTGTAGTCAATCT | 57.373 | 30.769 | 0.00 | 0.00 | 42.60 | 2.40 |
142 | 143 | 9.683069 | AAACTGAATGTCAAATTGTAGTCAATC | 57.317 | 29.630 | 0.00 | 0.00 | 42.60 | 2.67 |
153 | 154 | 9.934190 | GCACAAATTTTAAACTGAATGTCAAAT | 57.066 | 25.926 | 0.00 | 0.00 | 0.00 | 2.32 |
154 | 155 | 9.160496 | AGCACAAATTTTAAACTGAATGTCAAA | 57.840 | 25.926 | 0.00 | 0.00 | 0.00 | 2.69 |
155 | 156 | 8.715191 | AGCACAAATTTTAAACTGAATGTCAA | 57.285 | 26.923 | 0.00 | 0.00 | 0.00 | 3.18 |
156 | 157 | 8.715191 | AAGCACAAATTTTAAACTGAATGTCA | 57.285 | 26.923 | 0.00 | 0.00 | 0.00 | 3.58 |
157 | 158 | 8.275632 | GGAAGCACAAATTTTAAACTGAATGTC | 58.724 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
158 | 159 | 7.986889 | AGGAAGCACAAATTTTAAACTGAATGT | 59.013 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
159 | 160 | 8.369218 | AGGAAGCACAAATTTTAAACTGAATG | 57.631 | 30.769 | 0.00 | 0.00 | 0.00 | 2.67 |
161 | 162 | 9.691362 | GATAGGAAGCACAAATTTTAAACTGAA | 57.309 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
162 | 163 | 9.077885 | AGATAGGAAGCACAAATTTTAAACTGA | 57.922 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
163 | 164 | 9.132521 | CAGATAGGAAGCACAAATTTTAAACTG | 57.867 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
164 | 165 | 8.306761 | CCAGATAGGAAGCACAAATTTTAAACT | 58.693 | 33.333 | 0.00 | 0.00 | 41.22 | 2.66 |
165 | 166 | 7.063426 | GCCAGATAGGAAGCACAAATTTTAAAC | 59.937 | 37.037 | 0.00 | 0.00 | 41.22 | 2.01 |
166 | 167 | 7.096551 | GCCAGATAGGAAGCACAAATTTTAAA | 58.903 | 34.615 | 0.00 | 0.00 | 41.22 | 1.52 |
167 | 168 | 6.210385 | TGCCAGATAGGAAGCACAAATTTTAA | 59.790 | 34.615 | 0.00 | 0.00 | 41.22 | 1.52 |
168 | 169 | 5.714333 | TGCCAGATAGGAAGCACAAATTTTA | 59.286 | 36.000 | 0.00 | 0.00 | 41.22 | 1.52 |
169 | 170 | 4.527816 | TGCCAGATAGGAAGCACAAATTTT | 59.472 | 37.500 | 0.00 | 0.00 | 41.22 | 1.82 |
170 | 171 | 4.088634 | TGCCAGATAGGAAGCACAAATTT | 58.911 | 39.130 | 0.00 | 0.00 | 41.22 | 1.82 |
171 | 172 | 3.700538 | TGCCAGATAGGAAGCACAAATT | 58.299 | 40.909 | 0.00 | 0.00 | 41.22 | 1.82 |
172 | 173 | 3.370840 | TGCCAGATAGGAAGCACAAAT | 57.629 | 42.857 | 0.00 | 0.00 | 41.22 | 2.32 |
173 | 174 | 2.877097 | TGCCAGATAGGAAGCACAAA | 57.123 | 45.000 | 0.00 | 0.00 | 41.22 | 2.83 |
174 | 175 | 2.305635 | TCTTGCCAGATAGGAAGCACAA | 59.694 | 45.455 | 0.00 | 0.00 | 41.22 | 3.33 |
175 | 176 | 1.908619 | TCTTGCCAGATAGGAAGCACA | 59.091 | 47.619 | 0.00 | 0.00 | 41.22 | 4.57 |
176 | 177 | 2.698855 | TCTTGCCAGATAGGAAGCAC | 57.301 | 50.000 | 0.00 | 0.00 | 41.22 | 4.40 |
177 | 178 | 3.939740 | AATCTTGCCAGATAGGAAGCA | 57.060 | 42.857 | 0.00 | 0.00 | 39.00 | 3.91 |
178 | 179 | 5.312079 | ACATAATCTTGCCAGATAGGAAGC | 58.688 | 41.667 | 0.00 | 0.00 | 39.00 | 3.86 |
179 | 180 | 6.767456 | AGACATAATCTTGCCAGATAGGAAG | 58.233 | 40.000 | 0.00 | 0.00 | 39.00 | 3.46 |
180 | 181 | 6.556495 | AGAGACATAATCTTGCCAGATAGGAA | 59.444 | 38.462 | 0.00 | 0.00 | 39.00 | 3.36 |
181 | 182 | 6.080682 | AGAGACATAATCTTGCCAGATAGGA | 58.919 | 40.000 | 0.00 | 0.00 | 39.00 | 2.94 |
182 | 183 | 6.211184 | AGAGAGACATAATCTTGCCAGATAGG | 59.789 | 42.308 | 0.00 | 0.00 | 39.00 | 2.57 |
183 | 184 | 7.230849 | AGAGAGACATAATCTTGCCAGATAG | 57.769 | 40.000 | 0.00 | 0.00 | 39.00 | 2.08 |
184 | 185 | 8.747471 | CATAGAGAGACATAATCTTGCCAGATA | 58.253 | 37.037 | 0.00 | 0.00 | 39.00 | 1.98 |
185 | 186 | 7.454066 | TCATAGAGAGACATAATCTTGCCAGAT | 59.546 | 37.037 | 0.00 | 0.00 | 42.05 | 2.90 |
186 | 187 | 6.779539 | TCATAGAGAGACATAATCTTGCCAGA | 59.220 | 38.462 | 0.00 | 0.00 | 38.00 | 3.86 |
187 | 188 | 6.990798 | TCATAGAGAGACATAATCTTGCCAG | 58.009 | 40.000 | 0.00 | 0.00 | 38.00 | 4.85 |
188 | 189 | 6.983906 | TCATAGAGAGACATAATCTTGCCA | 57.016 | 37.500 | 0.00 | 0.00 | 38.00 | 4.92 |
189 | 190 | 6.817641 | CCATCATAGAGAGACATAATCTTGCC | 59.182 | 42.308 | 0.00 | 0.00 | 38.00 | 4.52 |
190 | 191 | 7.331440 | CACCATCATAGAGAGACATAATCTTGC | 59.669 | 40.741 | 0.00 | 0.00 | 38.00 | 4.01 |
191 | 192 | 8.366401 | ACACCATCATAGAGAGACATAATCTTG | 58.634 | 37.037 | 0.00 | 0.00 | 38.00 | 3.02 |
192 | 193 | 8.489676 | ACACCATCATAGAGAGACATAATCTT | 57.510 | 34.615 | 0.00 | 0.00 | 38.00 | 2.40 |
193 | 194 | 7.949565 | AGACACCATCATAGAGAGACATAATCT | 59.050 | 37.037 | 0.00 | 0.00 | 41.91 | 2.40 |
194 | 195 | 8.121305 | AGACACCATCATAGAGAGACATAATC | 57.879 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
195 | 196 | 8.489676 | AAGACACCATCATAGAGAGACATAAT | 57.510 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
196 | 197 | 7.904558 | AAGACACCATCATAGAGAGACATAA | 57.095 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
197 | 198 | 8.996651 | TTAAGACACCATCATAGAGAGACATA | 57.003 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
198 | 199 | 7.471260 | GCTTAAGACACCATCATAGAGAGACAT | 60.471 | 40.741 | 6.67 | 0.00 | 0.00 | 3.06 |
199 | 200 | 6.183360 | GCTTAAGACACCATCATAGAGAGACA | 60.183 | 42.308 | 6.67 | 0.00 | 0.00 | 3.41 |
200 | 201 | 6.040391 | AGCTTAAGACACCATCATAGAGAGAC | 59.960 | 42.308 | 6.67 | 0.00 | 0.00 | 3.36 |
201 | 202 | 6.132658 | AGCTTAAGACACCATCATAGAGAGA | 58.867 | 40.000 | 6.67 | 0.00 | 0.00 | 3.10 |
202 | 203 | 6.403866 | AGCTTAAGACACCATCATAGAGAG | 57.596 | 41.667 | 6.67 | 0.00 | 0.00 | 3.20 |
203 | 204 | 7.013750 | CAGTAGCTTAAGACACCATCATAGAGA | 59.986 | 40.741 | 6.67 | 0.00 | 0.00 | 3.10 |
204 | 205 | 7.013750 | TCAGTAGCTTAAGACACCATCATAGAG | 59.986 | 40.741 | 6.67 | 0.00 | 0.00 | 2.43 |
205 | 206 | 6.833933 | TCAGTAGCTTAAGACACCATCATAGA | 59.166 | 38.462 | 6.67 | 0.00 | 0.00 | 1.98 |
206 | 207 | 7.043961 | TCAGTAGCTTAAGACACCATCATAG | 57.956 | 40.000 | 6.67 | 0.00 | 0.00 | 2.23 |
207 | 208 | 7.418337 | TTCAGTAGCTTAAGACACCATCATA | 57.582 | 36.000 | 6.67 | 0.00 | 0.00 | 2.15 |
208 | 209 | 5.939764 | TCAGTAGCTTAAGACACCATCAT | 57.060 | 39.130 | 6.67 | 0.00 | 0.00 | 2.45 |
209 | 210 | 5.738619 | TTCAGTAGCTTAAGACACCATCA | 57.261 | 39.130 | 6.67 | 0.00 | 0.00 | 3.07 |
210 | 211 | 7.982354 | AGTATTTCAGTAGCTTAAGACACCATC | 59.018 | 37.037 | 6.67 | 0.00 | 0.00 | 3.51 |
211 | 212 | 7.852263 | AGTATTTCAGTAGCTTAAGACACCAT | 58.148 | 34.615 | 6.67 | 0.00 | 0.00 | 3.55 |
212 | 213 | 7.241042 | AGTATTTCAGTAGCTTAAGACACCA | 57.759 | 36.000 | 6.67 | 0.00 | 0.00 | 4.17 |
213 | 214 | 8.549338 | AAAGTATTTCAGTAGCTTAAGACACC | 57.451 | 34.615 | 6.67 | 0.00 | 27.08 | 4.16 |
278 | 279 | 9.559732 | ACACAAGTTATAGCATGCTATATTTCA | 57.440 | 29.630 | 36.19 | 24.07 | 40.09 | 2.69 |
281 | 282 | 9.155975 | GCTACACAAGTTATAGCATGCTATATT | 57.844 | 33.333 | 36.19 | 28.10 | 40.09 | 1.28 |
282 | 283 | 8.314021 | TGCTACACAAGTTATAGCATGCTATAT | 58.686 | 33.333 | 36.19 | 24.96 | 44.84 | 0.86 |
283 | 284 | 7.666623 | TGCTACACAAGTTATAGCATGCTATA | 58.333 | 34.615 | 33.76 | 33.76 | 44.84 | 1.31 |
284 | 285 | 6.524734 | TGCTACACAAGTTATAGCATGCTAT | 58.475 | 36.000 | 35.68 | 35.68 | 44.84 | 2.97 |
285 | 286 | 5.912892 | TGCTACACAAGTTATAGCATGCTA | 58.087 | 37.500 | 28.72 | 28.72 | 44.84 | 3.49 |
286 | 287 | 4.769688 | TGCTACACAAGTTATAGCATGCT | 58.230 | 39.130 | 25.99 | 25.99 | 44.84 | 3.79 |
291 | 292 | 6.475727 | TCTCGAAATGCTACACAAGTTATAGC | 59.524 | 38.462 | 6.38 | 6.38 | 41.44 | 2.97 |
292 | 293 | 7.987268 | TCTCGAAATGCTACACAAGTTATAG | 57.013 | 36.000 | 0.00 | 0.00 | 0.00 | 1.31 |
293 | 294 | 7.491372 | CCTTCTCGAAATGCTACACAAGTTATA | 59.509 | 37.037 | 0.00 | 0.00 | 0.00 | 0.98 |
294 | 295 | 6.313905 | CCTTCTCGAAATGCTACACAAGTTAT | 59.686 | 38.462 | 0.00 | 0.00 | 0.00 | 1.89 |
295 | 296 | 5.637810 | CCTTCTCGAAATGCTACACAAGTTA | 59.362 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
296 | 297 | 4.452455 | CCTTCTCGAAATGCTACACAAGTT | 59.548 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
297 | 298 | 3.997021 | CCTTCTCGAAATGCTACACAAGT | 59.003 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
298 | 299 | 3.372206 | CCCTTCTCGAAATGCTACACAAG | 59.628 | 47.826 | 0.00 | 0.00 | 0.00 | 3.16 |
299 | 300 | 3.334691 | CCCTTCTCGAAATGCTACACAA | 58.665 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
300 | 301 | 2.935238 | GCCCTTCTCGAAATGCTACACA | 60.935 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
301 | 302 | 1.666189 | GCCCTTCTCGAAATGCTACAC | 59.334 | 52.381 | 0.00 | 0.00 | 0.00 | 2.90 |
302 | 303 | 1.406887 | GGCCCTTCTCGAAATGCTACA | 60.407 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
303 | 304 | 1.134371 | AGGCCCTTCTCGAAATGCTAC | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
304 | 305 | 1.204146 | AGGCCCTTCTCGAAATGCTA | 58.796 | 50.000 | 0.00 | 0.00 | 0.00 | 3.49 |
305 | 306 | 0.329596 | AAGGCCCTTCTCGAAATGCT | 59.670 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
306 | 307 | 0.453390 | CAAGGCCCTTCTCGAAATGC | 59.547 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
307 | 308 | 0.453390 | GCAAGGCCCTTCTCGAAATG | 59.547 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
308 | 309 | 0.329596 | AGCAAGGCCCTTCTCGAAAT | 59.670 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
309 | 310 | 0.981183 | TAGCAAGGCCCTTCTCGAAA | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
310 | 311 | 1.204146 | ATAGCAAGGCCCTTCTCGAA | 58.796 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
311 | 312 | 2.082140 | TATAGCAAGGCCCTTCTCGA | 57.918 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
312 | 313 | 3.409026 | AATATAGCAAGGCCCTTCTCG | 57.591 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
313 | 314 | 4.889995 | ACAAAATATAGCAAGGCCCTTCTC | 59.110 | 41.667 | 0.00 | 0.00 | 0.00 | 2.87 |
314 | 315 | 4.871822 | ACAAAATATAGCAAGGCCCTTCT | 58.128 | 39.130 | 0.00 | 0.00 | 0.00 | 2.85 |
315 | 316 | 5.278512 | GCTACAAAATATAGCAAGGCCCTTC | 60.279 | 44.000 | 0.00 | 0.00 | 43.81 | 3.46 |
316 | 317 | 4.584743 | GCTACAAAATATAGCAAGGCCCTT | 59.415 | 41.667 | 0.00 | 0.00 | 43.81 | 3.95 |
317 | 318 | 4.145052 | GCTACAAAATATAGCAAGGCCCT | 58.855 | 43.478 | 0.00 | 0.00 | 43.81 | 5.19 |
318 | 319 | 3.058224 | CGCTACAAAATATAGCAAGGCCC | 60.058 | 47.826 | 0.00 | 0.00 | 44.46 | 5.80 |
319 | 320 | 3.564225 | ACGCTACAAAATATAGCAAGGCC | 59.436 | 43.478 | 0.00 | 0.00 | 44.46 | 5.19 |
320 | 321 | 4.527564 | CACGCTACAAAATATAGCAAGGC | 58.472 | 43.478 | 5.00 | 0.00 | 44.46 | 4.35 |
321 | 322 | 4.273480 | AGCACGCTACAAAATATAGCAAGG | 59.727 | 41.667 | 5.00 | 0.00 | 44.46 | 3.61 |
322 | 323 | 5.409643 | AGCACGCTACAAAATATAGCAAG | 57.590 | 39.130 | 5.00 | 0.00 | 44.46 | 4.01 |
323 | 324 | 7.490962 | AATAGCACGCTACAAAATATAGCAA | 57.509 | 32.000 | 0.00 | 0.00 | 44.46 | 3.91 |
324 | 325 | 7.490962 | AAATAGCACGCTACAAAATATAGCA | 57.509 | 32.000 | 0.00 | 0.00 | 44.46 | 3.49 |
325 | 326 | 8.782533 | AAAAATAGCACGCTACAAAATATAGC | 57.217 | 30.769 | 0.00 | 0.00 | 41.43 | 2.97 |
370 | 371 | 7.855784 | TCCCTTGCTAGTCTCATAAATATGA | 57.144 | 36.000 | 3.29 | 3.29 | 40.19 | 2.15 |
371 | 372 | 9.814899 | CTATCCCTTGCTAGTCTCATAAATATG | 57.185 | 37.037 | 0.00 | 0.00 | 35.04 | 1.78 |
372 | 373 | 9.775539 | TCTATCCCTTGCTAGTCTCATAAATAT | 57.224 | 33.333 | 0.00 | 0.00 | 0.00 | 1.28 |
373 | 374 | 9.026121 | GTCTATCCCTTGCTAGTCTCATAAATA | 57.974 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
374 | 375 | 7.510685 | TGTCTATCCCTTGCTAGTCTCATAAAT | 59.489 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
375 | 376 | 6.839134 | TGTCTATCCCTTGCTAGTCTCATAAA | 59.161 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
376 | 377 | 6.373759 | TGTCTATCCCTTGCTAGTCTCATAA | 58.626 | 40.000 | 0.00 | 0.00 | 0.00 | 1.90 |
377 | 378 | 5.953571 | TGTCTATCCCTTGCTAGTCTCATA | 58.046 | 41.667 | 0.00 | 0.00 | 0.00 | 2.15 |
378 | 379 | 4.809193 | TGTCTATCCCTTGCTAGTCTCAT | 58.191 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
379 | 380 | 4.251103 | TGTCTATCCCTTGCTAGTCTCA | 57.749 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
380 | 381 | 5.279256 | GGAATGTCTATCCCTTGCTAGTCTC | 60.279 | 48.000 | 0.00 | 0.00 | 0.00 | 3.36 |
381 | 382 | 4.591072 | GGAATGTCTATCCCTTGCTAGTCT | 59.409 | 45.833 | 0.00 | 0.00 | 0.00 | 3.24 |
382 | 383 | 4.559704 | CGGAATGTCTATCCCTTGCTAGTC | 60.560 | 50.000 | 0.00 | 0.00 | 33.13 | 2.59 |
383 | 384 | 3.322254 | CGGAATGTCTATCCCTTGCTAGT | 59.678 | 47.826 | 0.00 | 0.00 | 33.13 | 2.57 |
384 | 385 | 3.574396 | TCGGAATGTCTATCCCTTGCTAG | 59.426 | 47.826 | 0.00 | 0.00 | 33.13 | 3.42 |
385 | 386 | 3.572642 | TCGGAATGTCTATCCCTTGCTA | 58.427 | 45.455 | 0.00 | 0.00 | 33.13 | 3.49 |
386 | 387 | 2.398588 | TCGGAATGTCTATCCCTTGCT | 58.601 | 47.619 | 0.00 | 0.00 | 33.13 | 3.91 |
387 | 388 | 2.910688 | TCGGAATGTCTATCCCTTGC | 57.089 | 50.000 | 0.00 | 0.00 | 33.13 | 4.01 |
388 | 389 | 4.672587 | TCTTCGGAATGTCTATCCCTTG | 57.327 | 45.455 | 0.00 | 0.00 | 33.13 | 3.61 |
389 | 390 | 4.962995 | TCTTCTTCGGAATGTCTATCCCTT | 59.037 | 41.667 | 0.00 | 0.00 | 33.13 | 3.95 |
390 | 391 | 4.547671 | TCTTCTTCGGAATGTCTATCCCT | 58.452 | 43.478 | 0.00 | 0.00 | 33.13 | 4.20 |
391 | 392 | 4.939052 | TCTTCTTCGGAATGTCTATCCC | 57.061 | 45.455 | 0.00 | 0.00 | 33.13 | 3.85 |
392 | 393 | 6.039941 | TCTCTTCTTCTTCGGAATGTCTATCC | 59.960 | 42.308 | 0.00 | 0.00 | 33.06 | 2.59 |
393 | 394 | 7.033530 | TCTCTTCTTCTTCGGAATGTCTATC | 57.966 | 40.000 | 0.00 | 0.00 | 33.06 | 2.08 |
394 | 395 | 7.286546 | TCATCTCTTCTTCTTCGGAATGTCTAT | 59.713 | 37.037 | 0.00 | 0.00 | 33.06 | 1.98 |
395 | 396 | 6.603599 | TCATCTCTTCTTCTTCGGAATGTCTA | 59.396 | 38.462 | 0.00 | 0.00 | 33.06 | 2.59 |
396 | 397 | 5.420421 | TCATCTCTTCTTCTTCGGAATGTCT | 59.580 | 40.000 | 0.00 | 0.00 | 33.06 | 3.41 |
397 | 398 | 5.655488 | TCATCTCTTCTTCTTCGGAATGTC | 58.345 | 41.667 | 0.00 | 0.00 | 33.06 | 3.06 |
398 | 399 | 5.395103 | CCTCATCTCTTCTTCTTCGGAATGT | 60.395 | 44.000 | 0.00 | 0.00 | 33.06 | 2.71 |
399 | 400 | 5.049167 | CCTCATCTCTTCTTCTTCGGAATG | 58.951 | 45.833 | 0.00 | 0.00 | 33.06 | 2.67 |
400 | 401 | 4.714308 | ACCTCATCTCTTCTTCTTCGGAAT | 59.286 | 41.667 | 0.00 | 0.00 | 33.06 | 3.01 |
401 | 402 | 4.081972 | CACCTCATCTCTTCTTCTTCGGAA | 60.082 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
402 | 403 | 3.445450 | CACCTCATCTCTTCTTCTTCGGA | 59.555 | 47.826 | 0.00 | 0.00 | 0.00 | 4.55 |
403 | 404 | 3.445450 | TCACCTCATCTCTTCTTCTTCGG | 59.555 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
404 | 405 | 4.710423 | TCACCTCATCTCTTCTTCTTCG | 57.290 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
405 | 406 | 7.823799 | AGAAATTCACCTCATCTCTTCTTCTTC | 59.176 | 37.037 | 0.00 | 0.00 | 0.00 | 2.87 |
406 | 407 | 7.607223 | CAGAAATTCACCTCATCTCTTCTTCTT | 59.393 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
407 | 408 | 7.038445 | TCAGAAATTCACCTCATCTCTTCTTCT | 60.038 | 37.037 | 0.00 | 0.00 | 0.00 | 2.85 |
408 | 409 | 7.102346 | TCAGAAATTCACCTCATCTCTTCTTC | 58.898 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
409 | 410 | 7.013823 | TCAGAAATTCACCTCATCTCTTCTT | 57.986 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
410 | 411 | 6.617782 | TCAGAAATTCACCTCATCTCTTCT | 57.382 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
411 | 412 | 6.878389 | ACTTCAGAAATTCACCTCATCTCTTC | 59.122 | 38.462 | 0.00 | 0.00 | 0.00 | 2.87 |
412 | 413 | 6.777782 | ACTTCAGAAATTCACCTCATCTCTT | 58.222 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
413 | 414 | 6.371595 | ACTTCAGAAATTCACCTCATCTCT | 57.628 | 37.500 | 0.00 | 0.00 | 0.00 | 3.10 |
414 | 415 | 6.652481 | TGAACTTCAGAAATTCACCTCATCTC | 59.348 | 38.462 | 2.84 | 0.00 | 0.00 | 2.75 |
415 | 416 | 6.429385 | GTGAACTTCAGAAATTCACCTCATCT | 59.571 | 38.462 | 21.81 | 0.00 | 44.17 | 2.90 |
416 | 417 | 6.606768 | GTGAACTTCAGAAATTCACCTCATC | 58.393 | 40.000 | 21.81 | 1.38 | 44.17 | 2.92 |
417 | 418 | 6.566197 | GTGAACTTCAGAAATTCACCTCAT | 57.434 | 37.500 | 21.81 | 0.00 | 44.17 | 2.90 |
423 | 424 | 3.813166 | GGACGGTGAACTTCAGAAATTCA | 59.187 | 43.478 | 2.84 | 2.84 | 0.00 | 2.57 |
424 | 425 | 3.813166 | TGGACGGTGAACTTCAGAAATTC | 59.187 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
425 | 426 | 3.815809 | TGGACGGTGAACTTCAGAAATT | 58.184 | 40.909 | 0.00 | 0.00 | 0.00 | 1.82 |
426 | 427 | 3.485463 | TGGACGGTGAACTTCAGAAAT | 57.515 | 42.857 | 0.00 | 0.00 | 0.00 | 2.17 |
427 | 428 | 2.992124 | TGGACGGTGAACTTCAGAAA | 57.008 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
428 | 429 | 2.992124 | TTGGACGGTGAACTTCAGAA | 57.008 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
429 | 430 | 2.289444 | GGATTGGACGGTGAACTTCAGA | 60.289 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
430 | 431 | 2.076863 | GGATTGGACGGTGAACTTCAG | 58.923 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
431 | 432 | 1.418264 | TGGATTGGACGGTGAACTTCA | 59.582 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
432 | 433 | 2.178912 | TGGATTGGACGGTGAACTTC | 57.821 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
433 | 434 | 2.158667 | ACTTGGATTGGACGGTGAACTT | 60.159 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
434 | 435 | 1.420138 | ACTTGGATTGGACGGTGAACT | 59.580 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
435 | 436 | 1.892209 | ACTTGGATTGGACGGTGAAC | 58.108 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
436 | 437 | 3.262151 | TGATACTTGGATTGGACGGTGAA | 59.738 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
437 | 438 | 2.835156 | TGATACTTGGATTGGACGGTGA | 59.165 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
438 | 439 | 3.260475 | TGATACTTGGATTGGACGGTG | 57.740 | 47.619 | 0.00 | 0.00 | 0.00 | 4.94 |
439 | 440 | 3.992943 | TTGATACTTGGATTGGACGGT | 57.007 | 42.857 | 0.00 | 0.00 | 0.00 | 4.83 |
440 | 441 | 4.640201 | ACATTTGATACTTGGATTGGACGG | 59.360 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
441 | 442 | 5.353956 | TCACATTTGATACTTGGATTGGACG | 59.646 | 40.000 | 0.00 | 0.00 | 0.00 | 4.79 |
442 | 443 | 6.599244 | TCTCACATTTGATACTTGGATTGGAC | 59.401 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
443 | 444 | 6.720309 | TCTCACATTTGATACTTGGATTGGA | 58.280 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
444 | 445 | 7.395190 | TTCTCACATTTGATACTTGGATTGG | 57.605 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
447 | 448 | 9.911788 | AGTAATTCTCACATTTGATACTTGGAT | 57.088 | 29.630 | 0.00 | 0.00 | 0.00 | 3.41 |
452 | 453 | 9.836864 | TGCATAGTAATTCTCACATTTGATACT | 57.163 | 29.630 | 0.00 | 0.11 | 31.61 | 2.12 |
456 | 457 | 9.276590 | CCTATGCATAGTAATTCTCACATTTGA | 57.723 | 33.333 | 27.75 | 0.00 | 0.00 | 2.69 |
457 | 458 | 8.509690 | CCCTATGCATAGTAATTCTCACATTTG | 58.490 | 37.037 | 27.75 | 9.89 | 0.00 | 2.32 |
458 | 459 | 8.439971 | TCCCTATGCATAGTAATTCTCACATTT | 58.560 | 33.333 | 27.75 | 0.00 | 0.00 | 2.32 |
459 | 460 | 7.880195 | GTCCCTATGCATAGTAATTCTCACATT | 59.120 | 37.037 | 27.75 | 0.00 | 0.00 | 2.71 |
460 | 461 | 7.016563 | TGTCCCTATGCATAGTAATTCTCACAT | 59.983 | 37.037 | 27.75 | 0.00 | 0.00 | 3.21 |
461 | 462 | 6.326323 | TGTCCCTATGCATAGTAATTCTCACA | 59.674 | 38.462 | 27.75 | 15.98 | 0.00 | 3.58 |
462 | 463 | 6.759272 | TGTCCCTATGCATAGTAATTCTCAC | 58.241 | 40.000 | 27.75 | 14.11 | 0.00 | 3.51 |
463 | 464 | 6.994421 | TGTCCCTATGCATAGTAATTCTCA | 57.006 | 37.500 | 27.75 | 15.30 | 0.00 | 3.27 |
464 | 465 | 8.150945 | TCTTTGTCCCTATGCATAGTAATTCTC | 58.849 | 37.037 | 27.75 | 13.40 | 0.00 | 2.87 |
465 | 466 | 8.034313 | TCTTTGTCCCTATGCATAGTAATTCT | 57.966 | 34.615 | 27.75 | 0.00 | 0.00 | 2.40 |
466 | 467 | 8.677148 | TTCTTTGTCCCTATGCATAGTAATTC | 57.323 | 34.615 | 27.75 | 15.36 | 0.00 | 2.17 |
467 | 468 | 9.646522 | AATTCTTTGTCCCTATGCATAGTAATT | 57.353 | 29.630 | 27.75 | 16.76 | 0.00 | 1.40 |
470 | 471 | 9.555727 | GTTAATTCTTTGTCCCTATGCATAGTA | 57.444 | 33.333 | 27.75 | 15.50 | 0.00 | 1.82 |
471 | 472 | 8.275040 | AGTTAATTCTTTGTCCCTATGCATAGT | 58.725 | 33.333 | 27.75 | 10.70 | 0.00 | 2.12 |
472 | 473 | 8.682936 | AGTTAATTCTTTGTCCCTATGCATAG | 57.317 | 34.615 | 24.33 | 24.33 | 0.00 | 2.23 |
473 | 474 | 8.902806 | CAAGTTAATTCTTTGTCCCTATGCATA | 58.097 | 33.333 | 6.20 | 6.20 | 0.00 | 3.14 |
474 | 475 | 7.397192 | ACAAGTTAATTCTTTGTCCCTATGCAT | 59.603 | 33.333 | 3.79 | 3.79 | 0.00 | 3.96 |
475 | 476 | 6.719370 | ACAAGTTAATTCTTTGTCCCTATGCA | 59.281 | 34.615 | 0.00 | 0.00 | 0.00 | 3.96 |
476 | 477 | 7.158099 | ACAAGTTAATTCTTTGTCCCTATGC | 57.842 | 36.000 | 0.00 | 0.00 | 0.00 | 3.14 |
479 | 480 | 9.629878 | TGTTAACAAGTTAATTCTTTGTCCCTA | 57.370 | 29.630 | 5.64 | 0.00 | 37.37 | 3.53 |
480 | 481 | 8.528044 | TGTTAACAAGTTAATTCTTTGTCCCT | 57.472 | 30.769 | 5.64 | 0.00 | 37.37 | 4.20 |
481 | 482 | 9.589111 | TTTGTTAACAAGTTAATTCTTTGTCCC | 57.411 | 29.630 | 19.72 | 0.00 | 37.37 | 4.46 |
516 | 517 | 8.364894 | CCCCATTTTACAAAAAGTAGCTAGTTT | 58.635 | 33.333 | 18.90 | 18.90 | 33.43 | 2.66 |
517 | 518 | 7.726738 | TCCCCATTTTACAAAAAGTAGCTAGTT | 59.273 | 33.333 | 8.06 | 8.06 | 33.43 | 2.24 |
518 | 519 | 7.235804 | TCCCCATTTTACAAAAAGTAGCTAGT | 58.764 | 34.615 | 0.00 | 0.00 | 33.43 | 2.57 |
519 | 520 | 7.696992 | TCCCCATTTTACAAAAAGTAGCTAG | 57.303 | 36.000 | 0.00 | 0.00 | 33.43 | 3.42 |
520 | 521 | 7.672239 | ACATCCCCATTTTACAAAAAGTAGCTA | 59.328 | 33.333 | 0.00 | 0.00 | 33.43 | 3.32 |
521 | 522 | 6.496911 | ACATCCCCATTTTACAAAAAGTAGCT | 59.503 | 34.615 | 0.00 | 0.00 | 33.43 | 3.32 |
522 | 523 | 6.589907 | CACATCCCCATTTTACAAAAAGTAGC | 59.410 | 38.462 | 0.00 | 0.00 | 33.43 | 3.58 |
523 | 524 | 7.039363 | TCCACATCCCCATTTTACAAAAAGTAG | 60.039 | 37.037 | 0.00 | 0.00 | 33.43 | 2.57 |
524 | 525 | 6.782988 | TCCACATCCCCATTTTACAAAAAGTA | 59.217 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
525 | 526 | 5.604650 | TCCACATCCCCATTTTACAAAAAGT | 59.395 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
526 | 527 | 5.931724 | GTCCACATCCCCATTTTACAAAAAG | 59.068 | 40.000 | 0.00 | 0.00 | 0.00 | 2.27 |
527 | 528 | 5.221742 | GGTCCACATCCCCATTTTACAAAAA | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 1.94 |
528 | 529 | 4.284746 | GGTCCACATCCCCATTTTACAAAA | 59.715 | 41.667 | 0.00 | 0.00 | 0.00 | 2.44 |
529 | 530 | 3.835395 | GGTCCACATCCCCATTTTACAAA | 59.165 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
530 | 531 | 3.436243 | GGTCCACATCCCCATTTTACAA | 58.564 | 45.455 | 0.00 | 0.00 | 0.00 | 2.41 |
531 | 532 | 2.619332 | CGGTCCACATCCCCATTTTACA | 60.619 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
532 | 533 | 2.021457 | CGGTCCACATCCCCATTTTAC | 58.979 | 52.381 | 0.00 | 0.00 | 0.00 | 2.01 |
533 | 534 | 1.064314 | CCGGTCCACATCCCCATTTTA | 60.064 | 52.381 | 0.00 | 0.00 | 0.00 | 1.52 |
534 | 535 | 0.324275 | CCGGTCCACATCCCCATTTT | 60.324 | 55.000 | 0.00 | 0.00 | 0.00 | 1.82 |
535 | 536 | 1.211567 | TCCGGTCCACATCCCCATTT | 61.212 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
536 | 537 | 1.618143 | TCCGGTCCACATCCCCATT | 60.618 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
537 | 538 | 2.042095 | TCCGGTCCACATCCCCAT | 59.958 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
538 | 539 | 2.687200 | CTCCGGTCCACATCCCCA | 60.687 | 66.667 | 0.00 | 0.00 | 0.00 | 4.96 |
539 | 540 | 2.365105 | TCTCCGGTCCACATCCCC | 60.365 | 66.667 | 0.00 | 0.00 | 0.00 | 4.81 |
540 | 541 | 2.435693 | CCTCTCCGGTCCACATCCC | 61.436 | 68.421 | 0.00 | 0.00 | 0.00 | 3.85 |
541 | 542 | 2.435693 | CCCTCTCCGGTCCACATCC | 61.436 | 68.421 | 0.00 | 0.00 | 0.00 | 3.51 |
542 | 543 | 2.435693 | CCCCTCTCCGGTCCACATC | 61.436 | 68.421 | 0.00 | 0.00 | 0.00 | 3.06 |
543 | 544 | 2.365635 | CCCCTCTCCGGTCCACAT | 60.366 | 66.667 | 0.00 | 0.00 | 0.00 | 3.21 |
544 | 545 | 4.715130 | CCCCCTCTCCGGTCCACA | 62.715 | 72.222 | 0.00 | 0.00 | 0.00 | 4.17 |
548 | 549 | 3.787001 | CAAGCCCCCTCTCCGGTC | 61.787 | 72.222 | 0.00 | 0.00 | 0.00 | 4.79 |
549 | 550 | 4.332543 | TCAAGCCCCCTCTCCGGT | 62.333 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
550 | 551 | 3.474570 | CTCAAGCCCCCTCTCCGG | 61.475 | 72.222 | 0.00 | 0.00 | 0.00 | 5.14 |
551 | 552 | 2.364317 | TCTCAAGCCCCCTCTCCG | 60.364 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
552 | 553 | 0.399806 | ATCTCTCAAGCCCCCTCTCC | 60.400 | 60.000 | 0.00 | 0.00 | 0.00 | 3.71 |
553 | 554 | 0.758123 | CATCTCTCAAGCCCCCTCTC | 59.242 | 60.000 | 0.00 | 0.00 | 0.00 | 3.20 |
554 | 555 | 1.344191 | GCATCTCTCAAGCCCCCTCT | 61.344 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
555 | 556 | 1.148048 | GCATCTCTCAAGCCCCCTC | 59.852 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
556 | 557 | 0.918310 | AAGCATCTCTCAAGCCCCCT | 60.918 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
557 | 558 | 0.839946 | TAAGCATCTCTCAAGCCCCC | 59.160 | 55.000 | 0.00 | 0.00 | 0.00 | 5.40 |
558 | 559 | 2.947127 | ATAAGCATCTCTCAAGCCCC | 57.053 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
559 | 560 | 4.322567 | CCTAATAAGCATCTCTCAAGCCC | 58.677 | 47.826 | 0.00 | 0.00 | 0.00 | 5.19 |
560 | 561 | 3.750652 | GCCTAATAAGCATCTCTCAAGCC | 59.249 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
561 | 562 | 4.640364 | AGCCTAATAAGCATCTCTCAAGC | 58.360 | 43.478 | 0.00 | 0.00 | 0.00 | 4.01 |
562 | 563 | 7.225784 | TCTAGCCTAATAAGCATCTCTCAAG | 57.774 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
563 | 564 | 6.210385 | CCTCTAGCCTAATAAGCATCTCTCAA | 59.790 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
564 | 565 | 5.714333 | CCTCTAGCCTAATAAGCATCTCTCA | 59.286 | 44.000 | 0.00 | 0.00 | 0.00 | 3.27 |
565 | 566 | 5.714806 | ACCTCTAGCCTAATAAGCATCTCTC | 59.285 | 44.000 | 0.00 | 0.00 | 0.00 | 3.20 |
566 | 567 | 5.480073 | CACCTCTAGCCTAATAAGCATCTCT | 59.520 | 44.000 | 0.00 | 0.00 | 0.00 | 3.10 |
567 | 568 | 5.245075 | ACACCTCTAGCCTAATAAGCATCTC | 59.755 | 44.000 | 0.00 | 0.00 | 0.00 | 2.75 |
568 | 569 | 5.151454 | ACACCTCTAGCCTAATAAGCATCT | 58.849 | 41.667 | 0.00 | 0.00 | 0.00 | 2.90 |
569 | 570 | 5.476091 | ACACCTCTAGCCTAATAAGCATC | 57.524 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
570 | 571 | 6.726299 | TCATACACCTCTAGCCTAATAAGCAT | 59.274 | 38.462 | 0.00 | 0.00 | 0.00 | 3.79 |
571 | 572 | 6.075315 | TCATACACCTCTAGCCTAATAAGCA | 58.925 | 40.000 | 0.00 | 0.00 | 0.00 | 3.91 |
572 | 573 | 6.591750 | TCATACACCTCTAGCCTAATAAGC | 57.408 | 41.667 | 0.00 | 0.00 | 0.00 | 3.09 |
575 | 576 | 9.998106 | GAAAAATCATACACCTCTAGCCTAATA | 57.002 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
576 | 577 | 8.494433 | TGAAAAATCATACACCTCTAGCCTAAT | 58.506 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
577 | 578 | 7.769044 | GTGAAAAATCATACACCTCTAGCCTAA | 59.231 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
578 | 579 | 7.093068 | TGTGAAAAATCATACACCTCTAGCCTA | 60.093 | 37.037 | 0.00 | 0.00 | 33.08 | 3.93 |
579 | 580 | 6.116126 | GTGAAAAATCATACACCTCTAGCCT | 58.884 | 40.000 | 0.00 | 0.00 | 0.00 | 4.58 |
580 | 581 | 5.880332 | TGTGAAAAATCATACACCTCTAGCC | 59.120 | 40.000 | 0.00 | 0.00 | 33.08 | 3.93 |
581 | 582 | 6.818644 | TCTGTGAAAAATCATACACCTCTAGC | 59.181 | 38.462 | 0.00 | 0.00 | 33.08 | 3.42 |
582 | 583 | 8.954950 | ATCTGTGAAAAATCATACACCTCTAG | 57.045 | 34.615 | 0.00 | 0.00 | 33.08 | 2.43 |
583 | 584 | 9.166173 | CAATCTGTGAAAAATCATACACCTCTA | 57.834 | 33.333 | 0.00 | 0.00 | 33.08 | 2.43 |
584 | 585 | 7.884877 | TCAATCTGTGAAAAATCATACACCTCT | 59.115 | 33.333 | 0.00 | 0.00 | 31.51 | 3.69 |
585 | 586 | 7.965107 | GTCAATCTGTGAAAAATCATACACCTC | 59.035 | 37.037 | 0.00 | 0.00 | 38.23 | 3.85 |
586 | 587 | 7.667219 | AGTCAATCTGTGAAAAATCATACACCT | 59.333 | 33.333 | 0.00 | 0.00 | 38.23 | 4.00 |
587 | 588 | 7.820648 | AGTCAATCTGTGAAAAATCATACACC | 58.179 | 34.615 | 0.00 | 0.00 | 38.23 | 4.16 |
588 | 589 | 7.965107 | GGAGTCAATCTGTGAAAAATCATACAC | 59.035 | 37.037 | 0.00 | 0.00 | 38.23 | 2.90 |
589 | 590 | 7.148423 | CGGAGTCAATCTGTGAAAAATCATACA | 60.148 | 37.037 | 0.00 | 0.00 | 38.23 | 2.29 |
590 | 591 | 7.148407 | ACGGAGTCAATCTGTGAAAAATCATAC | 60.148 | 37.037 | 0.00 | 0.00 | 46.20 | 2.39 |
591 | 592 | 6.878923 | ACGGAGTCAATCTGTGAAAAATCATA | 59.121 | 34.615 | 0.00 | 0.00 | 46.20 | 2.15 |
592 | 593 | 5.707298 | ACGGAGTCAATCTGTGAAAAATCAT | 59.293 | 36.000 | 0.00 | 0.00 | 46.20 | 2.45 |
593 | 594 | 5.063204 | ACGGAGTCAATCTGTGAAAAATCA | 58.937 | 37.500 | 0.00 | 0.00 | 46.20 | 2.57 |
594 | 595 | 5.613358 | ACGGAGTCAATCTGTGAAAAATC | 57.387 | 39.130 | 0.00 | 0.00 | 46.20 | 2.17 |
604 | 605 | 3.430374 | CGATAAACCCACGGAGTCAATCT | 60.430 | 47.826 | 0.00 | 0.00 | 41.61 | 2.40 |
615 | 616 | 7.781548 | AAGTATATTGTGACGATAAACCCAC | 57.218 | 36.000 | 0.00 | 0.00 | 0.00 | 4.61 |
624 | 625 | 9.982291 | GCATAAAAAGAAAGTATATTGTGACGA | 57.018 | 29.630 | 0.00 | 0.00 | 0.00 | 4.20 |
698 | 705 | 4.626771 | CGGACCCAAATTAATACCACCTCA | 60.627 | 45.833 | 0.00 | 0.00 | 0.00 | 3.86 |
708 | 715 | 0.691904 | ACCGGACGGACCCAAATTAA | 59.308 | 50.000 | 18.80 | 0.00 | 38.96 | 1.40 |
714 | 722 | 3.618750 | GTGAACCGGACGGACCCA | 61.619 | 66.667 | 18.80 | 8.83 | 38.96 | 4.51 |
725 | 733 | 1.441732 | AAAAGGTGCGACGGTGAACC | 61.442 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
736 | 744 | 5.617529 | GCAGGATTATTTTGCAAAAAGGTGC | 60.618 | 40.000 | 27.10 | 22.60 | 45.15 | 5.01 |
754 | 763 | 5.183904 | GGTTGAATAGTGAAAACAGCAGGAT | 59.816 | 40.000 | 0.00 | 0.00 | 0.00 | 3.24 |
757 | 766 | 4.613622 | CGGGTTGAATAGTGAAAACAGCAG | 60.614 | 45.833 | 0.00 | 0.00 | 0.00 | 4.24 |
772 | 781 | 1.927487 | TACTAGGAGTGCGGGTTGAA | 58.073 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
778 | 787 | 3.678548 | GTGACTTTTTACTAGGAGTGCGG | 59.321 | 47.826 | 0.00 | 0.00 | 0.00 | 5.69 |
788 | 797 | 4.510571 | ACCAGTTCGTGTGACTTTTTACT | 58.489 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
789 | 798 | 4.870221 | ACCAGTTCGTGTGACTTTTTAC | 57.130 | 40.909 | 0.00 | 0.00 | 0.00 | 2.01 |
803 | 812 | 0.520404 | TCTCTCGCACGTACCAGTTC | 59.480 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
807 | 816 | 1.610038 | TCTTTTCTCTCGCACGTACCA | 59.390 | 47.619 | 0.00 | 0.00 | 0.00 | 3.25 |
812 | 821 | 3.309388 | TCTTCTTCTTTTCTCTCGCACG | 58.691 | 45.455 | 0.00 | 0.00 | 0.00 | 5.34 |
832 | 844 | 0.454452 | GCGAGGCACGGTCATTTTTC | 60.454 | 55.000 | 6.44 | 0.00 | 42.83 | 2.29 |
837 | 849 | 3.774959 | GATCGCGAGGCACGGTCAT | 62.775 | 63.158 | 16.66 | 0.00 | 40.37 | 3.06 |
838 | 850 | 4.492160 | GATCGCGAGGCACGGTCA | 62.492 | 66.667 | 16.66 | 0.00 | 40.37 | 4.02 |
963 | 975 | 3.142838 | GCGGCGAGGTAGGTGGTA | 61.143 | 66.667 | 12.98 | 0.00 | 0.00 | 3.25 |
982 | 994 | 1.977544 | CGGAGATAGGGGTAGGCGG | 60.978 | 68.421 | 0.00 | 0.00 | 0.00 | 6.13 |
1048 | 1060 | 1.134367 | ACTTCGCTTGATCGGATCGAA | 59.866 | 47.619 | 12.99 | 11.61 | 39.99 | 3.71 |
1089 | 1111 | 4.444838 | TTCCGCACGTCCATCCCG | 62.445 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
1187 | 1264 | 0.107993 | CTTCCAGGAGCATGCGAGAA | 60.108 | 55.000 | 13.01 | 10.76 | 0.00 | 2.87 |
1191 | 1268 | 1.135575 | GTTTTCTTCCAGGAGCATGCG | 60.136 | 52.381 | 13.01 | 0.00 | 0.00 | 4.73 |
1194 | 1271 | 2.616510 | CCTCGTTTTCTTCCAGGAGCAT | 60.617 | 50.000 | 0.00 | 0.00 | 0.00 | 3.79 |
1266 | 1363 | 2.584064 | CATGCTCACCCTGCCGTA | 59.416 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
1360 | 1469 | 2.760385 | GGAGGGCTCGCCTGTAGT | 60.760 | 66.667 | 8.00 | 0.00 | 36.10 | 2.73 |
1424 | 1533 | 1.031235 | GAGGGAACGTAGGCTAGACC | 58.969 | 60.000 | 0.00 | 0.00 | 39.61 | 3.85 |
1425 | 1534 | 1.760192 | TGAGGGAACGTAGGCTAGAC | 58.240 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
1426 | 1535 | 2.519771 | TTGAGGGAACGTAGGCTAGA | 57.480 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
1427 | 1536 | 2.036089 | GGATTGAGGGAACGTAGGCTAG | 59.964 | 54.545 | 0.00 | 0.00 | 0.00 | 3.42 |
1428 | 1537 | 2.037144 | GGATTGAGGGAACGTAGGCTA | 58.963 | 52.381 | 0.00 | 0.00 | 0.00 | 3.93 |
1429 | 1538 | 0.831307 | GGATTGAGGGAACGTAGGCT | 59.169 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
1430 | 1539 | 0.831307 | AGGATTGAGGGAACGTAGGC | 59.169 | 55.000 | 0.00 | 0.00 | 0.00 | 3.93 |
1431 | 1540 | 3.563223 | TCTAGGATTGAGGGAACGTAGG | 58.437 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1677 | 2105 | 4.137543 | CCAGTTAAGCACTTCCTTTGAGT | 58.862 | 43.478 | 0.00 | 0.00 | 30.92 | 3.41 |
1761 | 2190 | 8.980143 | ACCAATATTAGTGTTTGCACAATAAC | 57.020 | 30.769 | 0.05 | 0.00 | 44.11 | 1.89 |
1800 | 2229 | 9.598517 | CACCATTATTTGTTTGGCACTATAATT | 57.401 | 29.630 | 0.00 | 0.00 | 33.66 | 1.40 |
1881 | 2310 | 1.523258 | CAGGGAAGCAGGAGCATCG | 60.523 | 63.158 | 0.00 | 0.00 | 45.49 | 3.84 |
1901 | 2330 | 6.112927 | ACATGTTAAATTCCATGGCAAACT | 57.887 | 33.333 | 6.96 | 0.00 | 42.15 | 2.66 |
2026 | 2462 | 9.362151 | AGGACAAATAGAAAGATTACCAACAAA | 57.638 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
2027 | 2463 | 8.934023 | AGGACAAATAGAAAGATTACCAACAA | 57.066 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
2028 | 2464 | 8.934023 | AAGGACAAATAGAAAGATTACCAACA | 57.066 | 30.769 | 0.00 | 0.00 | 0.00 | 3.33 |
2218 | 2663 | 2.232696 | GAGACAGTGAAGAAGAGGGACC | 59.767 | 54.545 | 0.00 | 0.00 | 0.00 | 4.46 |
2254 | 2699 | 2.096819 | GCGTGTGTTAGAGAGAGAGAGG | 59.903 | 54.545 | 0.00 | 0.00 | 0.00 | 3.69 |
2370 | 2829 | 7.013834 | TGAAATTAATCCCCTTAGTTGTGGTT | 58.986 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
2385 | 2844 | 8.947055 | ACTGGCCAATTTACATGAAATTAATC | 57.053 | 30.769 | 7.01 | 2.20 | 44.35 | 1.75 |
2856 | 5425 | 4.379243 | CGCAAGGAGGCCGTGTCT | 62.379 | 66.667 | 0.00 | 0.00 | 35.50 | 3.41 |
3196 | 5780 | 2.237643 | TGGCTAACCACGGTTGATGTAT | 59.762 | 45.455 | 11.80 | 0.00 | 42.67 | 2.29 |
3245 | 5829 | 2.283086 | CAGAAAAACACGTACGCAGACA | 59.717 | 45.455 | 16.72 | 0.00 | 0.00 | 3.41 |
3380 | 5973 | 4.882427 | CCAGTCGTCTAGAACCAGATAGAA | 59.118 | 45.833 | 0.00 | 0.00 | 30.11 | 2.10 |
3768 | 6376 | 1.578926 | CGTCGGCATGCTTTTCCAA | 59.421 | 52.632 | 18.92 | 0.00 | 0.00 | 3.53 |
5116 | 7740 | 5.250774 | TGACCCAGAGTAAAGATTAGGCTTT | 59.749 | 40.000 | 0.00 | 0.00 | 40.85 | 3.51 |
5119 | 7743 | 4.162509 | AGTGACCCAGAGTAAAGATTAGGC | 59.837 | 45.833 | 0.00 | 0.00 | 0.00 | 3.93 |
5134 | 7758 | 4.023980 | CCAGTACTTCTATCAGTGACCCA | 58.976 | 47.826 | 0.00 | 0.00 | 0.00 | 4.51 |
5164 | 7788 | 5.147330 | AGTTCATTGTGTACCTTCGATGA | 57.853 | 39.130 | 0.00 | 7.96 | 34.05 | 2.92 |
5240 | 7864 | 5.067805 | ACCTAAAATGAAATTCGAGATGGGC | 59.932 | 40.000 | 0.00 | 0.00 | 33.67 | 5.36 |
5315 | 7939 | 9.626045 | CGAGCATATATTTATACACAAGAGACA | 57.374 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
5432 | 8058 | 7.807977 | ACTCAGATATAAAACCGCAATGAAT | 57.192 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.