Multiple sequence alignment - TraesCS2A01G206600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G206600 chr2A 100.000 6187 0 0 1 6187 185724297 185730483 0.000000e+00 11426.0
1 TraesCS2A01G206600 chr2A 97.233 253 6 1 1 253 677113626 677113877 1.590000e-115 427.0
2 TraesCS2A01G206600 chr2A 98.851 87 1 0 6079 6165 532575 532489 8.300000e-34 156.0
3 TraesCS2A01G206600 chr2A 97.753 89 2 0 3586 3674 65191276 65191188 2.990000e-33 154.0
4 TraesCS2A01G206600 chr2A 96.739 92 1 2 4804 4894 115434507 115434417 1.070000e-32 152.0
5 TraesCS2A01G206600 chr2A 98.780 82 1 0 3593 3674 156369610 156369529 5.000000e-31 147.0
6 TraesCS2A01G206600 chr2D 97.794 2448 47 4 1150 3595 164996372 164993930 0.000000e+00 4215.0
7 TraesCS2A01G206600 chr2D 96.012 1379 28 12 3666 5028 164993912 164992545 0.000000e+00 2217.0
8 TraesCS2A01G206600 chr2D 98.049 820 16 0 5025 5844 164992263 164991444 0.000000e+00 1426.0
9 TraesCS2A01G206600 chr2D 92.522 789 23 20 392 1154 164997180 164996402 0.000000e+00 1098.0
10 TraesCS2A01G206600 chr2D 95.455 154 6 1 5840 5992 164991409 164991256 1.720000e-60 244.0
11 TraesCS2A01G206600 chr2D 97.368 76 2 0 6010 6085 164991266 164991191 5.030000e-26 130.0
12 TraesCS2A01G206600 chr2B 97.795 2449 36 5 1150 3595 232347389 232349822 0.000000e+00 4207.0
13 TraesCS2A01G206600 chr2B 96.378 994 29 5 4853 5844 232351068 232352056 0.000000e+00 1629.0
14 TraesCS2A01G206600 chr2B 94.329 1058 31 15 3666 4704 232349840 232350887 0.000000e+00 1594.0
15 TraesCS2A01G206600 chr2B 88.344 815 36 25 392 1154 232346552 232347359 0.000000e+00 924.0
16 TraesCS2A01G206600 chr2B 96.129 155 4 2 5840 5992 232352092 232352246 1.030000e-62 252.0
17 TraesCS2A01G206600 chr2B 93.519 108 3 4 3569 3674 436035881 436035986 2.310000e-34 158.0
18 TraesCS2A01G206600 chr2B 93.000 100 5 1 4705 4802 232350970 232351069 1.800000e-30 145.0
19 TraesCS2A01G206600 chr2B 93.243 74 3 2 6010 6082 232352235 232352307 2.360000e-19 108.0
20 TraesCS2A01G206600 chr3A 84.733 655 48 23 5219 5844 548009674 548009043 5.300000e-170 608.0
21 TraesCS2A01G206600 chr3A 97.656 256 5 1 3 258 701833469 701833215 7.360000e-119 438.0
22 TraesCS2A01G206600 chr3A 98.837 86 1 0 6081 6166 269549732 269549817 2.990000e-33 154.0
23 TraesCS2A01G206600 chr3A 96.739 92 3 0 6081 6172 502841280 502841189 2.990000e-33 154.0
24 TraesCS2A01G206600 chr6A 98.047 256 5 0 1 256 600121599 600121344 4.400000e-121 446.0
25 TraesCS2A01G206600 chr6A 97.233 253 7 0 1 253 590096906 590097158 4.430000e-116 429.0
26 TraesCS2A01G206600 chr6A 95.960 99 3 1 6073 6171 346347099 346347002 6.420000e-35 159.0
27 TraesCS2A01G206600 chr7A 97.628 253 6 0 1 253 20161179 20161431 9.520000e-118 435.0
28 TraesCS2A01G206600 chr7A 97.266 256 7 0 1 256 209168471 209168216 9.520000e-118 435.0
29 TraesCS2A01G206600 chr7A 97.753 89 2 0 3586 3674 24466169 24466257 2.990000e-33 154.0
30 TraesCS2A01G206600 chr7A 96.739 92 1 2 3583 3674 291727868 291727779 1.070000e-32 152.0
31 TraesCS2A01G206600 chr5A 97.628 253 6 0 1 253 565492078 565492330 9.520000e-118 435.0
32 TraesCS2A01G206600 chr5A 98.851 87 1 0 6081 6167 688981779 688981865 8.300000e-34 156.0
33 TraesCS2A01G206600 chr5A 98.837 86 1 0 6081 6166 654404379 654404464 2.990000e-33 154.0
34 TraesCS2A01G206600 chr5A 91.489 94 6 2 4086 4178 474814295 474814387 1.810000e-25 128.0
35 TraesCS2A01G206600 chrUn 97.266 256 6 1 1 256 292875618 292875364 3.430000e-117 433.0
36 TraesCS2A01G206600 chrUn 95.652 92 4 0 6081 6172 325927183 325927274 1.390000e-31 148.0
37 TraesCS2A01G206600 chr1A 96.875 256 8 0 1 256 6295565 6295310 4.430000e-116 429.0
38 TraesCS2A01G206600 chr1A 96.774 93 3 0 6081 6173 345300414 345300322 8.300000e-34 156.0
39 TraesCS2A01G206600 chr1A 96.774 93 0 3 3585 3674 131969463 131969555 1.070000e-32 152.0
40 TraesCS2A01G206600 chr1A 95.652 92 4 0 6081 6172 272648113 272648022 1.390000e-31 148.0
41 TraesCS2A01G206600 chr1A 94.737 95 4 1 4802 4896 448929831 448929738 5.000000e-31 147.0
42 TraesCS2A01G206600 chr6D 96.774 93 2 1 4807 4899 120657662 120657571 2.990000e-33 154.0
43 TraesCS2A01G206600 chr4B 96.739 92 1 2 4804 4894 438099450 438099360 1.070000e-32 152.0
44 TraesCS2A01G206600 chr4A 96.739 92 1 2 3583 3674 646314598 646314509 1.070000e-32 152.0
45 TraesCS2A01G206600 chr4A 91.818 110 4 5 4786 4894 69329835 69329940 1.390000e-31 148.0
46 TraesCS2A01G206600 chr7B 96.703 91 1 2 3584 3674 20111199 20111287 3.860000e-32 150.0
47 TraesCS2A01G206600 chr6B 96.703 91 1 2 3584 3674 212540814 212540726 3.860000e-32 150.0
48 TraesCS2A01G206600 chr6B 86.207 87 10 2 2759 2844 317887186 317887271 6.600000e-15 93.5
49 TraesCS2A01G206600 chr3D 94.898 98 2 3 4805 4901 54370500 54370405 3.860000e-32 150.0
50 TraesCS2A01G206600 chr7D 93.939 99 4 2 4806 4903 5068084 5068181 1.390000e-31 148.0
51 TraesCS2A01G206600 chr5B 93.069 101 6 1 4797 4897 121201355 121201256 5.000000e-31 147.0
52 TraesCS2A01G206600 chr5B 90.000 100 8 2 4080 4178 441635851 441635949 1.810000e-25 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G206600 chr2A 185724297 185730483 6186 False 11426.000000 11426 100.000 1 6187 1 chr2A.!!$F1 6186
1 TraesCS2A01G206600 chr2D 164991191 164997180 5989 True 1555.000000 4215 96.200 392 6085 6 chr2D.!!$R1 5693
2 TraesCS2A01G206600 chr2B 232346552 232352307 5755 False 1265.571429 4207 94.174 392 6082 7 chr2B.!!$F2 5690
3 TraesCS2A01G206600 chr3A 548009043 548009674 631 True 608.000000 608 84.733 5219 5844 1 chr3A.!!$R2 625

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.033920 CCAAAAGTGAAGCCCTTGCC 59.966 55.000 0.00 0.00 38.69 4.52 F
81 82 0.036388 TGAACGAATCAGACCTGGGC 60.036 55.000 0.00 0.00 33.04 5.36 F
1831 1926 0.179048 TGAAGCGGCCCAGTCATATG 60.179 55.000 0.00 0.00 0.00 1.78 F
2472 2567 0.169230 CCTGACTCGAACTCGACCAG 59.831 60.000 14.86 14.86 44.22 4.00 F
3662 3758 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77 F
3664 3760 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2013 2108 0.029567 GCCAGTATCTCGTGTCCTCG 59.970 60.000 0.00 0.00 0.00 4.63 R
2197 2292 4.069232 GGCCCCGCCTTTTCAAGC 62.069 66.667 0.00 0.00 46.69 4.01 R
3643 3739 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46 R
3957 4057 0.031178 GAGTTGCACAAGGCCACAAG 59.969 55.000 5.01 0.00 40.48 3.16 R
4644 4757 0.392461 GATAGCCGACTGTGCCCAAA 60.392 55.000 0.00 0.00 0.00 3.28 R
5482 5974 0.682209 ACTACCTAAAGGCGCGAGGA 60.682 55.000 12.10 0.00 39.32 3.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.839654 CTGATATGCAGCTTTGCGG 57.160 52.632 0.00 0.00 37.90 5.69
23 24 1.302366 CTGATATGCAGCTTTGCGGA 58.698 50.000 0.00 0.00 37.90 5.54
24 25 1.003116 CTGATATGCAGCTTTGCGGAC 60.003 52.381 0.00 0.00 37.90 4.79
25 26 0.308993 GATATGCAGCTTTGCGGACC 59.691 55.000 0.00 0.00 37.69 4.46
26 27 0.107017 ATATGCAGCTTTGCGGACCT 60.107 50.000 0.00 0.00 37.69 3.85
27 28 0.744414 TATGCAGCTTTGCGGACCTC 60.744 55.000 0.00 0.00 37.69 3.85
28 29 3.435186 GCAGCTTTGCGGACCTCC 61.435 66.667 0.00 0.00 0.00 4.30
29 30 2.032528 CAGCTTTGCGGACCTCCA 59.967 61.111 0.00 0.00 35.14 3.86
30 31 1.600636 CAGCTTTGCGGACCTCCAA 60.601 57.895 0.00 0.00 35.14 3.53
31 32 1.150536 AGCTTTGCGGACCTCCAAA 59.849 52.632 6.90 6.90 35.14 3.28
32 33 0.890996 AGCTTTGCGGACCTCCAAAG 60.891 55.000 21.25 21.25 46.55 2.77
33 34 1.172812 GCTTTGCGGACCTCCAAAGT 61.173 55.000 23.94 0.00 45.91 2.66
34 35 0.593128 CTTTGCGGACCTCCAAAGTG 59.407 55.000 18.95 4.03 41.68 3.16
35 36 0.821711 TTTGCGGACCTCCAAAGTGG 60.822 55.000 3.78 0.00 39.43 4.00
36 37 3.056328 GCGGACCTCCAAAGTGGC 61.056 66.667 0.00 0.00 37.47 5.01
37 38 2.750350 CGGACCTCCAAAGTGGCT 59.250 61.111 0.00 0.00 37.47 4.75
38 39 1.376037 CGGACCTCCAAAGTGGCTC 60.376 63.158 0.00 0.00 37.47 4.70
39 40 1.761174 GGACCTCCAAAGTGGCTCA 59.239 57.895 0.00 0.00 37.47 4.26
40 41 0.606673 GGACCTCCAAAGTGGCTCAC 60.607 60.000 0.00 0.00 37.47 3.51
41 42 0.606673 GACCTCCAAAGTGGCTCACC 60.607 60.000 2.18 0.00 37.47 4.02
42 43 1.352622 ACCTCCAAAGTGGCTCACCA 61.353 55.000 2.18 0.00 46.51 4.17
58 59 0.752658 ACCAAAAGTGAAGCCCTTGC 59.247 50.000 0.00 0.00 37.95 4.01
59 60 0.033920 CCAAAAGTGAAGCCCTTGCC 59.966 55.000 0.00 0.00 38.69 4.52
60 61 0.318955 CAAAAGTGAAGCCCTTGCCG 60.319 55.000 0.00 0.00 38.69 5.69
61 62 0.755327 AAAAGTGAAGCCCTTGCCGT 60.755 50.000 0.00 0.00 38.69 5.68
62 63 0.755327 AAAGTGAAGCCCTTGCCGTT 60.755 50.000 0.00 0.00 38.69 4.44
63 64 1.455383 AAGTGAAGCCCTTGCCGTTG 61.455 55.000 0.00 0.00 38.69 4.10
64 65 1.896660 GTGAAGCCCTTGCCGTTGA 60.897 57.895 0.00 0.00 38.69 3.18
65 66 1.152860 TGAAGCCCTTGCCGTTGAA 60.153 52.632 0.00 0.00 38.69 2.69
66 67 1.285950 GAAGCCCTTGCCGTTGAAC 59.714 57.895 0.00 0.00 38.69 3.18
67 68 2.458006 GAAGCCCTTGCCGTTGAACG 62.458 60.000 11.30 11.30 42.11 3.95
68 69 2.951475 AAGCCCTTGCCGTTGAACGA 62.951 55.000 20.47 0.00 42.28 3.85
69 70 2.548295 GCCCTTGCCGTTGAACGAA 61.548 57.895 20.47 5.46 46.05 3.85
70 71 1.862602 GCCCTTGCCGTTGAACGAAT 61.863 55.000 20.47 0.00 46.05 3.34
71 72 0.168128 CCCTTGCCGTTGAACGAATC 59.832 55.000 20.47 8.33 46.05 2.52
72 73 0.871722 CCTTGCCGTTGAACGAATCA 59.128 50.000 20.47 10.86 46.05 2.57
73 74 1.135972 CCTTGCCGTTGAACGAATCAG 60.136 52.381 20.47 8.95 46.05 2.90
74 75 1.798223 CTTGCCGTTGAACGAATCAGA 59.202 47.619 20.47 4.82 46.05 3.27
75 76 1.144969 TGCCGTTGAACGAATCAGAC 58.855 50.000 20.47 0.22 46.05 3.51
76 77 0.442699 GCCGTTGAACGAATCAGACC 59.557 55.000 20.47 0.00 46.05 3.85
77 78 1.939838 GCCGTTGAACGAATCAGACCT 60.940 52.381 20.47 0.00 46.05 3.85
78 79 1.726791 CCGTTGAACGAATCAGACCTG 59.273 52.381 20.47 0.00 46.05 4.00
79 80 1.726791 CGTTGAACGAATCAGACCTGG 59.273 52.381 13.13 0.00 46.05 4.45
80 81 2.076863 GTTGAACGAATCAGACCTGGG 58.923 52.381 0.00 0.00 39.77 4.45
81 82 0.036388 TGAACGAATCAGACCTGGGC 60.036 55.000 0.00 0.00 33.04 5.36
82 83 0.036388 GAACGAATCAGACCTGGGCA 60.036 55.000 0.47 0.00 0.00 5.36
83 84 0.400213 AACGAATCAGACCTGGGCAA 59.600 50.000 0.47 0.00 0.00 4.52
84 85 0.321653 ACGAATCAGACCTGGGCAAC 60.322 55.000 0.47 0.00 0.00 4.17
85 86 0.321564 CGAATCAGACCTGGGCAACA 60.322 55.000 0.47 0.00 39.74 3.33
86 87 1.168714 GAATCAGACCTGGGCAACAC 58.831 55.000 0.47 0.00 39.74 3.32
87 88 0.251341 AATCAGACCTGGGCAACACC 60.251 55.000 0.47 0.00 39.74 4.16
96 97 4.572571 GGCAACACCCCGGACACA 62.573 66.667 0.73 0.00 0.00 3.72
97 98 3.284449 GCAACACCCCGGACACAC 61.284 66.667 0.73 0.00 0.00 3.82
98 99 2.593436 CAACACCCCGGACACACC 60.593 66.667 0.73 0.00 0.00 4.16
99 100 3.091190 AACACCCCGGACACACCA 61.091 61.111 0.73 0.00 38.90 4.17
100 101 2.457323 AACACCCCGGACACACCAT 61.457 57.895 0.73 0.00 38.90 3.55
101 102 2.046314 CACCCCGGACACACCATC 60.046 66.667 0.73 0.00 38.90 3.51
102 103 3.702048 ACCCCGGACACACCATCG 61.702 66.667 0.73 0.00 38.90 3.84
103 104 3.387091 CCCCGGACACACCATCGA 61.387 66.667 0.73 0.00 38.90 3.59
104 105 2.660206 CCCGGACACACCATCGAA 59.340 61.111 0.73 0.00 38.90 3.71
105 106 1.740296 CCCGGACACACCATCGAAC 60.740 63.158 0.73 0.00 38.90 3.95
106 107 1.292223 CCGGACACACCATCGAACT 59.708 57.895 0.00 0.00 38.90 3.01
107 108 0.736325 CCGGACACACCATCGAACTC 60.736 60.000 0.00 0.00 38.90 3.01
108 109 0.736325 CGGACACACCATCGAACTCC 60.736 60.000 0.00 0.00 38.90 3.85
109 110 0.320374 GGACACACCATCGAACTCCA 59.680 55.000 0.00 0.00 38.79 3.86
110 111 1.673033 GGACACACCATCGAACTCCAG 60.673 57.143 0.00 0.00 38.79 3.86
111 112 1.272490 GACACACCATCGAACTCCAGA 59.728 52.381 0.00 0.00 0.00 3.86
112 113 1.902508 ACACACCATCGAACTCCAGAT 59.097 47.619 0.00 0.00 0.00 2.90
113 114 2.093973 ACACACCATCGAACTCCAGATC 60.094 50.000 0.00 0.00 0.00 2.75
114 115 2.167281 CACACCATCGAACTCCAGATCT 59.833 50.000 0.00 0.00 0.00 2.75
115 116 2.167281 ACACCATCGAACTCCAGATCTG 59.833 50.000 16.24 16.24 0.00 2.90
124 125 4.950479 CCAGATCTGGCACTCCAC 57.050 61.111 28.45 0.00 44.73 4.02
125 126 1.222936 CCAGATCTGGCACTCCACC 59.777 63.158 28.45 0.00 44.73 4.61
126 127 1.556373 CCAGATCTGGCACTCCACCA 61.556 60.000 28.45 0.00 44.73 4.17
127 128 0.392193 CAGATCTGGCACTCCACCAC 60.392 60.000 15.38 0.00 37.47 4.16
128 129 1.448540 GATCTGGCACTCCACCACG 60.449 63.158 0.00 0.00 37.47 4.94
129 130 1.888436 GATCTGGCACTCCACCACGA 61.888 60.000 0.00 0.00 37.47 4.35
130 131 2.172483 ATCTGGCACTCCACCACGAC 62.172 60.000 0.00 0.00 37.47 4.34
131 132 2.842462 TGGCACTCCACCACGACT 60.842 61.111 0.00 0.00 37.47 4.18
132 133 1.532078 TGGCACTCCACCACGACTA 60.532 57.895 0.00 0.00 37.47 2.59
133 134 1.116536 TGGCACTCCACCACGACTAA 61.117 55.000 0.00 0.00 37.47 2.24
134 135 0.389948 GGCACTCCACCACGACTAAG 60.390 60.000 0.00 0.00 0.00 2.18
135 136 0.601558 GCACTCCACCACGACTAAGA 59.398 55.000 0.00 0.00 0.00 2.10
136 137 1.669211 GCACTCCACCACGACTAAGAC 60.669 57.143 0.00 0.00 0.00 3.01
137 138 0.879765 ACTCCACCACGACTAAGACG 59.120 55.000 0.00 0.00 0.00 4.18
138 139 0.456312 CTCCACCACGACTAAGACGC 60.456 60.000 0.00 0.00 0.00 5.19
139 140 1.445582 CCACCACGACTAAGACGCC 60.446 63.158 0.00 0.00 0.00 5.68
140 141 1.800315 CACCACGACTAAGACGCCG 60.800 63.158 0.00 0.00 0.00 6.46
141 142 1.968017 ACCACGACTAAGACGCCGA 60.968 57.895 0.00 0.00 0.00 5.54
142 143 1.210931 CCACGACTAAGACGCCGAA 59.789 57.895 0.00 0.00 0.00 4.30
143 144 0.797249 CCACGACTAAGACGCCGAAG 60.797 60.000 0.00 0.00 0.00 3.79
159 160 3.629142 CGAAGGAGGAAACCATACCTT 57.371 47.619 0.00 0.00 42.57 3.50
161 162 3.887352 GAAGGAGGAAACCATACCTTCC 58.113 50.000 19.59 6.73 46.03 3.46
162 163 2.929301 AGGAGGAAACCATACCTTCCA 58.071 47.619 3.83 0.00 43.12 3.53
163 164 3.474920 AGGAGGAAACCATACCTTCCAT 58.525 45.455 3.83 0.00 43.12 3.41
164 165 3.459969 AGGAGGAAACCATACCTTCCATC 59.540 47.826 3.83 0.00 43.12 3.51
165 166 3.435169 GGAGGAAACCATACCTTCCATCC 60.435 52.174 3.83 4.28 43.12 3.51
166 167 3.197983 AGGAAACCATACCTTCCATCCA 58.802 45.455 3.83 0.00 43.12 3.41
167 168 3.053619 AGGAAACCATACCTTCCATCCAC 60.054 47.826 3.83 0.00 43.12 4.02
168 169 3.308832 GGAAACCATACCTTCCATCCACA 60.309 47.826 0.00 0.00 40.79 4.17
169 170 4.340617 GAAACCATACCTTCCATCCACAA 58.659 43.478 0.00 0.00 0.00 3.33
170 171 4.396357 AACCATACCTTCCATCCACAAA 57.604 40.909 0.00 0.00 0.00 2.83
171 172 3.697166 ACCATACCTTCCATCCACAAAC 58.303 45.455 0.00 0.00 0.00 2.93
172 173 3.023832 CCATACCTTCCATCCACAAACC 58.976 50.000 0.00 0.00 0.00 3.27
173 174 3.563261 CCATACCTTCCATCCACAAACCA 60.563 47.826 0.00 0.00 0.00 3.67
174 175 1.995376 ACCTTCCATCCACAAACCAC 58.005 50.000 0.00 0.00 0.00 4.16
175 176 0.881118 CCTTCCATCCACAAACCACG 59.119 55.000 0.00 0.00 0.00 4.94
176 177 1.544537 CCTTCCATCCACAAACCACGA 60.545 52.381 0.00 0.00 0.00 4.35
177 178 2.226330 CTTCCATCCACAAACCACGAA 58.774 47.619 0.00 0.00 0.00 3.85
178 179 1.600023 TCCATCCACAAACCACGAAC 58.400 50.000 0.00 0.00 0.00 3.95
179 180 0.596082 CCATCCACAAACCACGAACC 59.404 55.000 0.00 0.00 0.00 3.62
180 181 0.596082 CATCCACAAACCACGAACCC 59.404 55.000 0.00 0.00 0.00 4.11
181 182 0.183971 ATCCACAAACCACGAACCCA 59.816 50.000 0.00 0.00 0.00 4.51
182 183 0.464735 TCCACAAACCACGAACCCAG 60.465 55.000 0.00 0.00 0.00 4.45
183 184 0.750182 CCACAAACCACGAACCCAGT 60.750 55.000 0.00 0.00 0.00 4.00
184 185 1.475392 CCACAAACCACGAACCCAGTA 60.475 52.381 0.00 0.00 0.00 2.74
185 186 1.871039 CACAAACCACGAACCCAGTAG 59.129 52.381 0.00 0.00 0.00 2.57
186 187 1.764134 ACAAACCACGAACCCAGTAGA 59.236 47.619 0.00 0.00 0.00 2.59
187 188 2.370849 ACAAACCACGAACCCAGTAGAT 59.629 45.455 0.00 0.00 0.00 1.98
188 189 3.579586 ACAAACCACGAACCCAGTAGATA 59.420 43.478 0.00 0.00 0.00 1.98
189 190 4.224370 ACAAACCACGAACCCAGTAGATAT 59.776 41.667 0.00 0.00 0.00 1.63
190 191 5.183228 CAAACCACGAACCCAGTAGATATT 58.817 41.667 0.00 0.00 0.00 1.28
191 192 4.667519 ACCACGAACCCAGTAGATATTC 57.332 45.455 0.00 0.00 0.00 1.75
192 193 3.387050 ACCACGAACCCAGTAGATATTCC 59.613 47.826 0.00 0.00 0.00 3.01
193 194 3.552273 CCACGAACCCAGTAGATATTCCG 60.552 52.174 0.00 0.00 0.00 4.30
194 195 3.067742 CACGAACCCAGTAGATATTCCGT 59.932 47.826 0.00 0.00 0.00 4.69
195 196 3.317430 ACGAACCCAGTAGATATTCCGTC 59.683 47.826 0.00 0.00 0.00 4.79
196 197 3.568853 CGAACCCAGTAGATATTCCGTCT 59.431 47.826 0.00 0.00 0.00 4.18
197 198 4.037684 CGAACCCAGTAGATATTCCGTCTT 59.962 45.833 0.00 0.00 0.00 3.01
198 199 5.530712 GAACCCAGTAGATATTCCGTCTTC 58.469 45.833 0.00 0.00 0.00 2.87
199 200 3.896272 ACCCAGTAGATATTCCGTCTTCC 59.104 47.826 0.00 0.00 0.00 3.46
200 201 3.895656 CCCAGTAGATATTCCGTCTTCCA 59.104 47.826 0.00 0.00 0.00 3.53
201 202 4.021894 CCCAGTAGATATTCCGTCTTCCAG 60.022 50.000 0.00 0.00 0.00 3.86
202 203 4.827835 CCAGTAGATATTCCGTCTTCCAGA 59.172 45.833 0.00 0.00 0.00 3.86
203 204 5.478679 CCAGTAGATATTCCGTCTTCCAGAT 59.521 44.000 0.00 0.00 0.00 2.90
204 205 6.385843 CAGTAGATATTCCGTCTTCCAGATG 58.614 44.000 0.00 0.00 0.00 2.90
205 206 6.015856 CAGTAGATATTCCGTCTTCCAGATGT 60.016 42.308 0.00 0.00 29.27 3.06
206 207 5.461032 AGATATTCCGTCTTCCAGATGTC 57.539 43.478 0.00 0.00 29.27 3.06
207 208 2.586258 ATTCCGTCTTCCAGATGTCG 57.414 50.000 0.00 0.00 29.27 4.35
208 209 1.254026 TTCCGTCTTCCAGATGTCGT 58.746 50.000 0.00 0.00 29.27 4.34
209 210 0.809385 TCCGTCTTCCAGATGTCGTC 59.191 55.000 0.00 0.00 29.27 4.20
210 211 0.523546 CCGTCTTCCAGATGTCGTCG 60.524 60.000 0.00 0.00 29.27 5.12
211 212 0.446616 CGTCTTCCAGATGTCGTCGA 59.553 55.000 0.00 0.00 0.00 4.20
212 213 1.064208 CGTCTTCCAGATGTCGTCGAT 59.936 52.381 0.00 0.00 0.00 3.59
213 214 2.287103 CGTCTTCCAGATGTCGTCGATA 59.713 50.000 0.00 0.00 0.00 2.92
214 215 3.619729 GTCTTCCAGATGTCGTCGATAC 58.380 50.000 0.00 0.00 0.00 2.24
215 216 3.064958 GTCTTCCAGATGTCGTCGATACA 59.935 47.826 0.00 6.09 0.00 2.29
216 217 3.312697 TCTTCCAGATGTCGTCGATACAG 59.687 47.826 0.00 0.00 0.00 2.74
217 218 2.914059 TCCAGATGTCGTCGATACAGA 58.086 47.619 0.00 0.00 0.00 3.41
218 219 2.612672 TCCAGATGTCGTCGATACAGAC 59.387 50.000 0.00 7.71 37.76 3.51
219 220 2.287069 CCAGATGTCGTCGATACAGACC 60.287 54.545 0.00 2.60 37.85 3.85
220 221 2.354821 CAGATGTCGTCGATACAGACCA 59.645 50.000 0.00 0.00 37.85 4.02
221 222 2.355132 AGATGTCGTCGATACAGACCAC 59.645 50.000 0.00 4.96 37.85 4.16
222 223 1.525941 TGTCGTCGATACAGACCACA 58.474 50.000 0.00 0.00 39.31 4.17
223 224 1.881324 TGTCGTCGATACAGACCACAA 59.119 47.619 0.00 0.00 38.83 3.33
224 225 2.490509 TGTCGTCGATACAGACCACAAT 59.509 45.455 0.00 0.00 38.83 2.71
225 226 3.106672 GTCGTCGATACAGACCACAATC 58.893 50.000 0.00 0.00 37.85 2.67
226 227 3.014623 TCGTCGATACAGACCACAATCT 58.985 45.455 0.00 0.00 37.85 2.40
233 234 1.012086 CAGACCACAATCTGCATCCG 58.988 55.000 0.00 0.00 39.77 4.18
234 235 0.745845 AGACCACAATCTGCATCCGC 60.746 55.000 0.00 0.00 39.24 5.54
235 236 0.745845 GACCACAATCTGCATCCGCT 60.746 55.000 0.00 0.00 39.64 5.52
236 237 0.745845 ACCACAATCTGCATCCGCTC 60.746 55.000 0.00 0.00 39.64 5.03
237 238 1.442526 CCACAATCTGCATCCGCTCC 61.443 60.000 0.00 0.00 39.64 4.70
238 239 0.463295 CACAATCTGCATCCGCTCCT 60.463 55.000 0.00 0.00 39.64 3.69
239 240 0.463295 ACAATCTGCATCCGCTCCTG 60.463 55.000 0.00 0.00 39.64 3.86
240 241 1.147824 AATCTGCATCCGCTCCTGG 59.852 57.895 0.00 0.00 39.64 4.45
241 242 1.340399 AATCTGCATCCGCTCCTGGA 61.340 55.000 0.00 0.00 43.58 3.86
242 243 2.037620 ATCTGCATCCGCTCCTGGAC 62.038 60.000 0.00 0.00 41.85 4.02
243 244 2.685017 TGCATCCGCTCCTGGACT 60.685 61.111 0.00 0.00 41.85 3.85
244 245 1.381191 TGCATCCGCTCCTGGACTA 60.381 57.895 0.00 0.00 41.85 2.59
245 246 1.068250 GCATCCGCTCCTGGACTAC 59.932 63.158 0.00 0.00 41.85 2.73
246 247 1.742768 CATCCGCTCCTGGACTACC 59.257 63.158 0.00 0.00 41.85 3.18
247 248 0.757188 CATCCGCTCCTGGACTACCT 60.757 60.000 0.00 0.00 41.85 3.08
248 249 0.468400 ATCCGCTCCTGGACTACCTC 60.468 60.000 0.00 0.00 41.85 3.85
249 250 2.128507 CCGCTCCTGGACTACCTCC 61.129 68.421 0.00 0.00 39.97 4.30
250 251 2.128507 CGCTCCTGGACTACCTCCC 61.129 68.421 0.00 0.00 38.49 4.30
251 252 1.001760 GCTCCTGGACTACCTCCCA 59.998 63.158 0.00 0.00 38.49 4.37
252 253 0.617820 GCTCCTGGACTACCTCCCAA 60.618 60.000 0.00 0.00 38.49 4.12
253 254 1.952621 CTCCTGGACTACCTCCCAAA 58.047 55.000 0.00 0.00 38.49 3.28
254 255 1.555533 CTCCTGGACTACCTCCCAAAC 59.444 57.143 0.00 0.00 38.49 2.93
255 256 1.151413 TCCTGGACTACCTCCCAAACT 59.849 52.381 0.00 0.00 38.49 2.66
256 257 1.985895 CCTGGACTACCTCCCAAACTT 59.014 52.381 0.00 0.00 38.49 2.66
257 258 2.027100 CCTGGACTACCTCCCAAACTTC 60.027 54.545 0.00 0.00 38.49 3.01
258 259 1.982958 TGGACTACCTCCCAAACTTCC 59.017 52.381 0.00 0.00 38.49 3.46
259 260 1.982958 GGACTACCTCCCAAACTTCCA 59.017 52.381 0.00 0.00 31.83 3.53
260 261 2.027100 GGACTACCTCCCAAACTTCCAG 60.027 54.545 0.00 0.00 31.83 3.86
261 262 2.904434 GACTACCTCCCAAACTTCCAGA 59.096 50.000 0.00 0.00 0.00 3.86
262 263 3.519913 GACTACCTCCCAAACTTCCAGAT 59.480 47.826 0.00 0.00 0.00 2.90
263 264 2.887151 ACCTCCCAAACTTCCAGATG 57.113 50.000 0.00 0.00 0.00 2.90
264 265 2.065799 ACCTCCCAAACTTCCAGATGT 58.934 47.619 0.00 0.00 0.00 3.06
265 266 2.040412 ACCTCCCAAACTTCCAGATGTC 59.960 50.000 0.00 0.00 0.00 3.06
266 267 2.350522 CTCCCAAACTTCCAGATGTCG 58.649 52.381 0.00 0.00 0.00 4.35
267 268 1.697432 TCCCAAACTTCCAGATGTCGT 59.303 47.619 0.00 0.00 0.00 4.34
268 269 2.105821 TCCCAAACTTCCAGATGTCGTT 59.894 45.455 0.00 0.00 0.00 3.85
269 270 2.226437 CCCAAACTTCCAGATGTCGTTG 59.774 50.000 0.00 0.00 0.00 4.10
270 271 3.138304 CCAAACTTCCAGATGTCGTTGA 58.862 45.455 0.00 0.00 0.00 3.18
271 272 3.563808 CCAAACTTCCAGATGTCGTTGAA 59.436 43.478 0.00 0.00 0.00 2.69
272 273 4.036262 CCAAACTTCCAGATGTCGTTGAAA 59.964 41.667 0.00 0.00 0.00 2.69
273 274 5.278463 CCAAACTTCCAGATGTCGTTGAAAT 60.278 40.000 0.00 0.00 0.00 2.17
274 275 5.362556 AACTTCCAGATGTCGTTGAAATG 57.637 39.130 0.00 0.00 0.00 2.32
275 276 3.189287 ACTTCCAGATGTCGTTGAAATGC 59.811 43.478 0.00 0.00 0.00 3.56
276 277 2.083774 TCCAGATGTCGTTGAAATGCC 58.916 47.619 0.00 0.00 0.00 4.40
277 278 1.133025 CCAGATGTCGTTGAAATGCCC 59.867 52.381 0.00 0.00 0.00 5.36
278 279 2.086869 CAGATGTCGTTGAAATGCCCT 58.913 47.619 0.00 0.00 0.00 5.19
279 280 2.489329 CAGATGTCGTTGAAATGCCCTT 59.511 45.455 0.00 0.00 0.00 3.95
280 281 3.057315 CAGATGTCGTTGAAATGCCCTTT 60.057 43.478 0.00 0.00 0.00 3.11
281 282 4.155826 CAGATGTCGTTGAAATGCCCTTTA 59.844 41.667 0.00 0.00 0.00 1.85
282 283 4.764823 AGATGTCGTTGAAATGCCCTTTAA 59.235 37.500 0.00 0.00 0.00 1.52
283 284 4.231718 TGTCGTTGAAATGCCCTTTAAC 57.768 40.909 0.00 0.00 0.00 2.01
284 285 3.004944 TGTCGTTGAAATGCCCTTTAACC 59.995 43.478 0.00 0.00 0.00 2.85
285 286 2.559231 TCGTTGAAATGCCCTTTAACCC 59.441 45.455 0.00 0.00 0.00 4.11
286 287 2.297597 CGTTGAAATGCCCTTTAACCCA 59.702 45.455 0.00 0.00 0.00 4.51
287 288 3.243907 CGTTGAAATGCCCTTTAACCCAA 60.244 43.478 0.00 0.00 0.00 4.12
288 289 4.062293 GTTGAAATGCCCTTTAACCCAAC 58.938 43.478 0.00 0.00 0.00 3.77
289 290 2.635427 TGAAATGCCCTTTAACCCAACC 59.365 45.455 0.00 0.00 0.00 3.77
290 291 1.262417 AATGCCCTTTAACCCAACCG 58.738 50.000 0.00 0.00 0.00 4.44
291 292 0.406361 ATGCCCTTTAACCCAACCGA 59.594 50.000 0.00 0.00 0.00 4.69
292 293 0.406361 TGCCCTTTAACCCAACCGAT 59.594 50.000 0.00 0.00 0.00 4.18
293 294 1.100510 GCCCTTTAACCCAACCGATC 58.899 55.000 0.00 0.00 0.00 3.69
294 295 1.375551 CCCTTTAACCCAACCGATCG 58.624 55.000 8.51 8.51 0.00 3.69
295 296 1.375551 CCTTTAACCCAACCGATCGG 58.624 55.000 32.20 32.20 42.03 4.18
311 312 2.511600 GGTGCAGCGCGAGGTAAT 60.512 61.111 12.10 0.00 41.81 1.89
312 313 2.106683 GGTGCAGCGCGAGGTAATT 61.107 57.895 12.10 0.00 41.81 1.40
313 314 0.808453 GGTGCAGCGCGAGGTAATTA 60.808 55.000 12.10 0.00 41.81 1.40
314 315 1.217882 GTGCAGCGCGAGGTAATTAT 58.782 50.000 12.10 0.00 41.81 1.28
315 316 1.070577 GTGCAGCGCGAGGTAATTATG 60.071 52.381 12.10 0.00 41.81 1.90
316 317 1.202475 TGCAGCGCGAGGTAATTATGA 60.202 47.619 12.10 0.00 41.81 2.15
317 318 1.192534 GCAGCGCGAGGTAATTATGAC 59.807 52.381 12.10 0.00 41.81 3.06
318 319 2.469826 CAGCGCGAGGTAATTATGACA 58.530 47.619 12.10 0.00 41.81 3.58
319 320 2.863740 CAGCGCGAGGTAATTATGACAA 59.136 45.455 12.10 0.00 41.81 3.18
320 321 3.060272 CAGCGCGAGGTAATTATGACAAG 60.060 47.826 12.10 0.00 41.81 3.16
321 322 2.864343 GCGCGAGGTAATTATGACAAGT 59.136 45.455 12.10 0.00 0.00 3.16
322 323 3.308866 GCGCGAGGTAATTATGACAAGTT 59.691 43.478 12.10 0.00 0.00 2.66
323 324 4.782195 GCGCGAGGTAATTATGACAAGTTG 60.782 45.833 12.10 0.00 0.00 3.16
324 325 4.588278 GCGAGGTAATTATGACAAGTTGC 58.412 43.478 1.81 0.00 0.00 4.17
325 326 4.495844 GCGAGGTAATTATGACAAGTTGCC 60.496 45.833 1.81 0.00 0.00 4.52
326 327 4.634004 CGAGGTAATTATGACAAGTTGCCA 59.366 41.667 1.81 0.00 0.00 4.92
327 328 5.123186 CGAGGTAATTATGACAAGTTGCCAA 59.877 40.000 1.81 0.00 0.00 4.52
328 329 6.515272 AGGTAATTATGACAAGTTGCCAAG 57.485 37.500 1.81 0.00 0.00 3.61
329 330 6.010219 AGGTAATTATGACAAGTTGCCAAGT 58.990 36.000 1.81 0.00 0.00 3.16
330 331 7.172342 AGGTAATTATGACAAGTTGCCAAGTA 58.828 34.615 1.81 0.00 0.00 2.24
331 332 7.336931 AGGTAATTATGACAAGTTGCCAAGTAG 59.663 37.037 1.81 0.00 0.00 2.57
332 333 7.120726 GGTAATTATGACAAGTTGCCAAGTAGT 59.879 37.037 1.81 0.00 0.00 2.73
333 334 9.158233 GTAATTATGACAAGTTGCCAAGTAGTA 57.842 33.333 1.81 0.00 0.00 1.82
334 335 7.849804 ATTATGACAAGTTGCCAAGTAGTAG 57.150 36.000 1.81 0.00 0.00 2.57
335 336 4.682778 TGACAAGTTGCCAAGTAGTAGT 57.317 40.909 1.81 0.00 0.00 2.73
336 337 5.794726 TGACAAGTTGCCAAGTAGTAGTA 57.205 39.130 1.81 0.00 0.00 1.82
337 338 5.535333 TGACAAGTTGCCAAGTAGTAGTAC 58.465 41.667 1.81 0.00 0.00 2.73
338 339 5.069383 TGACAAGTTGCCAAGTAGTAGTACA 59.931 40.000 10.33 0.00 0.00 2.90
339 340 5.295152 ACAAGTTGCCAAGTAGTAGTACAC 58.705 41.667 10.33 0.00 0.00 2.90
340 341 4.170292 AGTTGCCAAGTAGTAGTACACG 57.830 45.455 10.33 0.60 0.00 4.49
341 342 3.822735 AGTTGCCAAGTAGTAGTACACGA 59.177 43.478 10.33 0.00 0.00 4.35
342 343 3.837213 TGCCAAGTAGTAGTACACGAC 57.163 47.619 10.33 0.00 33.29 4.34
343 344 3.148412 TGCCAAGTAGTAGTACACGACA 58.852 45.455 10.33 0.80 35.39 4.35
344 345 3.760151 TGCCAAGTAGTAGTACACGACAT 59.240 43.478 10.33 0.00 35.39 3.06
345 346 4.943093 TGCCAAGTAGTAGTACACGACATA 59.057 41.667 10.33 0.00 35.39 2.29
346 347 5.415389 TGCCAAGTAGTAGTACACGACATAA 59.585 40.000 10.33 0.00 35.39 1.90
347 348 5.970023 GCCAAGTAGTAGTACACGACATAAG 59.030 44.000 10.33 0.00 35.39 1.73
348 349 6.404074 GCCAAGTAGTAGTACACGACATAAGT 60.404 42.308 10.33 0.00 35.39 2.24
349 350 7.533426 CCAAGTAGTAGTACACGACATAAGTT 58.467 38.462 10.33 0.00 35.39 2.66
350 351 8.025445 CCAAGTAGTAGTACACGACATAAGTTT 58.975 37.037 10.33 0.00 35.39 2.66
351 352 9.403110 CAAGTAGTAGTACACGACATAAGTTTT 57.597 33.333 10.33 0.00 35.39 2.43
352 353 9.617975 AAGTAGTAGTACACGACATAAGTTTTC 57.382 33.333 10.33 0.00 35.39 2.29
353 354 9.007901 AGTAGTAGTACACGACATAAGTTTTCT 57.992 33.333 10.33 0.00 35.39 2.52
354 355 9.617975 GTAGTAGTACACGACATAAGTTTTCTT 57.382 33.333 2.52 0.00 37.07 2.52
356 357 9.538508 AGTAGTACACGACATAAGTTTTCTTTT 57.461 29.630 2.52 0.00 40.91 2.27
424 425 0.949105 AGCGTACACGGCTCTTTTGG 60.949 55.000 3.67 0.00 40.23 3.28
465 470 3.674410 GCTTCCTTGCCTCTAAATTGCAC 60.674 47.826 0.00 0.00 34.16 4.57
529 537 1.680735 CAAGCCAAGTTGCCAACTACA 59.319 47.619 11.10 0.00 41.91 2.74
532 540 1.407258 GCCAAGTTGCCAACTACACAA 59.593 47.619 11.10 0.00 41.91 3.33
533 541 2.798145 GCCAAGTTGCCAACTACACAAC 60.798 50.000 11.10 0.00 41.91 3.32
534 542 2.540769 CCAAGTTGCCAACTACACAACG 60.541 50.000 11.10 0.00 46.41 4.10
535 543 2.032680 AGTTGCCAACTACACAACGT 57.967 45.000 8.67 0.00 46.41 3.99
536 544 1.937899 AGTTGCCAACTACACAACGTC 59.062 47.619 8.67 0.00 46.41 4.34
538 546 0.466543 TGCCAACTACACAACGTCCT 59.533 50.000 0.00 0.00 0.00 3.85
539 547 1.145803 GCCAACTACACAACGTCCTC 58.854 55.000 0.00 0.00 0.00 3.71
540 548 1.415374 CCAACTACACAACGTCCTCG 58.585 55.000 0.00 0.00 43.34 4.63
566 577 4.475135 GACCAGGCCCGCTCCTTC 62.475 72.222 0.00 0.00 33.25 3.46
573 584 2.694760 GCCCGCTCCTTCAAGCAAG 61.695 63.158 0.00 0.00 42.62 4.01
691 707 2.184830 GGAGCGGGCGAATAAACCC 61.185 63.158 0.00 0.00 43.25 4.11
744 760 4.320456 AGGCACCAGCGTGGACAG 62.320 66.667 10.46 2.58 40.96 3.51
763 779 3.674753 ACAGCAAACAAATATCGCAAAGC 59.325 39.130 0.00 0.00 0.00 3.51
1023 1068 3.437795 CGCCTACTGTCGGTCGGT 61.438 66.667 4.39 0.00 39.26 4.69
1034 1079 3.681835 GGTCGGTGAGAGGTGCGT 61.682 66.667 0.00 0.00 0.00 5.24
1047 1096 3.070302 AGAGGTGCGTTTCTTCTTCTTCT 59.930 43.478 0.00 0.00 0.00 2.85
1048 1097 3.394719 AGGTGCGTTTCTTCTTCTTCTC 58.605 45.455 0.00 0.00 0.00 2.87
1049 1098 2.155924 GGTGCGTTTCTTCTTCTTCTCG 59.844 50.000 0.00 0.00 0.00 4.04
1050 1099 2.795470 GTGCGTTTCTTCTTCTTCTCGT 59.205 45.455 0.00 0.00 0.00 4.18
1051 1100 3.050619 TGCGTTTCTTCTTCTTCTCGTC 58.949 45.455 0.00 0.00 0.00 4.20
1052 1101 3.243434 TGCGTTTCTTCTTCTTCTCGTCT 60.243 43.478 0.00 0.00 0.00 4.18
1053 1102 4.023450 TGCGTTTCTTCTTCTTCTCGTCTA 60.023 41.667 0.00 0.00 0.00 2.59
1056 1105 6.315551 CGTTTCTTCTTCTTCTCGTCTATCA 58.684 40.000 0.00 0.00 0.00 2.15
1234 1326 8.519526 GTTTGTTATTACTGTGATCAATTGGGA 58.480 33.333 5.42 0.00 0.00 4.37
1285 1377 2.614057 GCCACATACTATGCCTGAACAC 59.386 50.000 0.00 0.00 0.00 3.32
1415 1509 8.616799 AAATAAAATGGCTAGTATTTTGGGGA 57.383 30.769 20.57 8.75 38.01 4.81
1421 1515 6.142259 TGGCTAGTATTTTGGGGAAAGTTA 57.858 37.500 0.00 0.00 0.00 2.24
1435 1529 6.389869 TGGGGAAAGTTATGAGATGATTACCT 59.610 38.462 0.00 0.00 0.00 3.08
1440 1534 9.606631 GAAAGTTATGAGATGATTACCTGAACT 57.393 33.333 0.00 0.00 0.00 3.01
1450 1544 6.985188 TGATTACCTGAACTACATTGCTTC 57.015 37.500 0.00 0.00 0.00 3.86
1483 1578 7.226523 ACAATTGAGTTTTAAATTTCACCCTGC 59.773 33.333 13.59 0.00 0.00 4.85
1509 1604 5.703130 AGTGTCAGATAAGCTTGGAAACTTC 59.297 40.000 9.86 0.00 0.00 3.01
1574 1669 0.325602 AACCGGAACAAATAGGCGGA 59.674 50.000 9.46 0.00 0.00 5.54
1831 1926 0.179048 TGAAGCGGCCCAGTCATATG 60.179 55.000 0.00 0.00 0.00 1.78
2013 2108 3.328505 CCAAAATGGAAGGCATTGTCAC 58.671 45.455 0.00 0.00 40.96 3.67
2472 2567 0.169230 CCTGACTCGAACTCGACCAG 59.831 60.000 14.86 14.86 44.22 4.00
2593 2688 7.846485 TCAATTTTATGGCAAAAGTTTCGAAC 58.154 30.769 0.00 0.00 0.00 3.95
2596 2691 0.736053 TGGCAAAAGTTTCGAACGCT 59.264 45.000 0.00 0.00 36.23 5.07
2884 2979 4.675976 CCACATTGGGACATATGCATTT 57.324 40.909 3.54 0.00 39.30 2.32
2926 3021 5.277825 TGCACGTCTTTTATTTGTTTCCTG 58.722 37.500 0.00 0.00 0.00 3.86
2960 3055 1.697432 CCCTGAGTGGTGGTTTACTGA 59.303 52.381 0.00 0.00 0.00 3.41
3152 3248 7.495050 AACATTCTTGTCCGTCTAAACGAGAC 61.495 42.308 0.00 6.17 42.87 3.36
3619 3715 4.413928 GGCAACCTGGTGCATGTA 57.586 55.556 18.44 0.00 46.81 2.29
3620 3716 2.183409 GGCAACCTGGTGCATGTAG 58.817 57.895 18.44 0.00 46.81 2.74
3621 3717 1.508088 GCAACCTGGTGCATGTAGC 59.492 57.895 6.00 6.00 44.29 3.58
3622 3718 0.962356 GCAACCTGGTGCATGTAGCT 60.962 55.000 14.15 0.00 44.29 3.32
3623 3719 1.089920 CAACCTGGTGCATGTAGCTC 58.910 55.000 14.15 0.00 45.94 4.09
3629 3725 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
3630 3726 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
3631 3727 2.828128 GCATGTAGCTCCCGCTTGC 61.828 63.158 0.00 0.00 46.47 4.01
3632 3728 2.202932 ATGTAGCTCCCGCTTGCG 60.203 61.111 8.14 8.14 46.47 4.85
3635 3731 4.819761 TAGCTCCCGCTTGCGCAG 62.820 66.667 11.31 6.32 46.47 5.18
3647 3743 4.785453 GCGCAGGGTCCAGGGAAG 62.785 72.222 0.30 0.00 0.00 3.46
3648 3744 4.101448 CGCAGGGTCCAGGGAAGG 62.101 72.222 0.00 0.00 0.00 3.46
3649 3745 3.732849 GCAGGGTCCAGGGAAGGG 61.733 72.222 0.00 0.00 0.00 3.95
3650 3746 2.204151 CAGGGTCCAGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
3651 3747 2.125225 AGGGTCCAGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
3652 3748 3.015753 GGGTCCAGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
3653 3749 3.400054 GGTCCAGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
3654 3750 2.284405 GTCCAGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
3655 3751 2.284405 TCCAGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
3656 3752 3.400054 CCAGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
3657 3753 2.606519 CAGGGAAGGGTCCGACCA 60.607 66.667 19.43 0.00 46.04 4.02
3658 3754 2.606826 AGGGAAGGGTCCGACCAC 60.607 66.667 19.43 8.70 46.04 4.16
3659 3755 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
3660 3756 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
3661 3757 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
3662 3758 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
3663 3759 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
3664 3760 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
3665 3761 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
3800 3896 4.018050 AGCTCAGGGATTTTAGGTTCATGT 60.018 41.667 0.00 0.00 0.00 3.21
3807 3903 6.887002 AGGGATTTTAGGTTCATGTCTTTCTC 59.113 38.462 0.00 0.00 0.00 2.87
3866 3962 6.106673 TGGCTTCAGTACTAGCTTTTGTATC 58.893 40.000 15.53 0.03 37.54 2.24
3955 4055 6.604171 TGCTGTATCTCCCAATCAATAACAT 58.396 36.000 0.00 0.00 0.00 2.71
3957 4057 6.569226 GCTGTATCTCCCAATCAATAACATGC 60.569 42.308 0.00 0.00 0.00 4.06
3958 4058 6.604171 TGTATCTCCCAATCAATAACATGCT 58.396 36.000 0.00 0.00 0.00 3.79
3959 4059 7.062322 TGTATCTCCCAATCAATAACATGCTT 58.938 34.615 0.00 0.00 0.00 3.91
3960 4060 5.840243 TCTCCCAATCAATAACATGCTTG 57.160 39.130 0.00 0.00 0.00 4.01
3961 4061 5.263599 TCTCCCAATCAATAACATGCTTGT 58.736 37.500 0.00 0.00 37.82 3.16
3962 4062 5.125900 TCTCCCAATCAATAACATGCTTGTG 59.874 40.000 5.94 0.00 35.83 3.33
3963 4063 4.160065 TCCCAATCAATAACATGCTTGTGG 59.840 41.667 5.94 0.74 35.83 4.17
3964 4064 3.866910 CCAATCAATAACATGCTTGTGGC 59.133 43.478 5.94 0.00 35.83 5.01
4143 4247 6.348478 TTGACCAGGGGATAAATAATTGGA 57.652 37.500 0.00 0.00 0.00 3.53
4333 4443 8.553153 TGGTAGGAATTGGATAAGACATTTACA 58.447 33.333 0.00 0.00 0.00 2.41
4546 4659 7.557358 TCGGTTATTATACTGTGTACAGAAGGA 59.443 37.037 18.18 0.00 46.59 3.36
4639 4752 6.951256 TGTTCAAGAAAGATGATGTAGACG 57.049 37.500 0.00 0.00 0.00 4.18
4640 4753 6.687604 TGTTCAAGAAAGATGATGTAGACGA 58.312 36.000 0.00 0.00 0.00 4.20
4641 4754 6.586463 TGTTCAAGAAAGATGATGTAGACGAC 59.414 38.462 0.00 0.00 0.00 4.34
4642 4755 6.267496 TCAAGAAAGATGATGTAGACGACA 57.733 37.500 0.00 0.00 43.97 4.35
4644 4757 5.906113 AGAAAGATGATGTAGACGACAGT 57.094 39.130 0.00 0.00 42.79 3.55
4656 4771 0.814010 ACGACAGTTTGGGCACAGTC 60.814 55.000 0.00 0.00 31.53 3.51
4816 5015 8.173412 TCATCATCACTACATTATACTCCCTCT 58.827 37.037 0.00 0.00 0.00 3.69
5016 5220 7.014711 AGCTACAATACACTGTGCATAGTATCT 59.985 37.037 16.35 4.51 0.00 1.98
5262 5751 5.090652 TGTATTCTGTCGTTCAAAAGTGC 57.909 39.130 0.00 0.00 0.00 4.40
5320 5809 3.792956 GCACTTGAAATATGATGTTGGCG 59.207 43.478 0.00 0.00 0.00 5.69
5405 5895 5.464168 GCTGCAGTTGATTTTCACACTAAT 58.536 37.500 16.64 0.00 0.00 1.73
5482 5974 9.313118 GAAATTTGGTGTAGAAATCAAACAGTT 57.687 29.630 0.00 0.00 32.87 3.16
5504 5996 2.159198 CCTCGCGCCTTTAGGTAGTTTA 60.159 50.000 0.00 0.00 37.57 2.01
5521 6013 4.620982 AGTTTACTGCTGAAATTTGGTGC 58.379 39.130 0.00 0.00 0.00 5.01
5720 6214 1.374560 TTATCCCAAACACGGCATCG 58.625 50.000 0.00 0.00 43.02 3.84
5798 6314 7.619982 GCAAATTAAAGTAACACTCAATGCTGC 60.620 37.037 0.00 0.00 0.00 5.25
5813 6329 0.440371 GCTGCTACGCACTTGTTCTC 59.560 55.000 0.00 0.00 33.79 2.87
5963 6520 4.214545 CGTTGCAGGGTAGTGTGAATTTTA 59.785 41.667 0.00 0.00 0.00 1.52
5964 6521 5.278071 CGTTGCAGGGTAGTGTGAATTTTAA 60.278 40.000 0.00 0.00 0.00 1.52
5970 6527 7.363793 GCAGGGTAGTGTGAATTTTAATTCCAT 60.364 37.037 11.54 0.38 43.19 3.41
5992 6549 4.890088 TGTTAATCCTTCGTACTTGCAGT 58.110 39.130 0.00 0.00 0.00 4.40
5995 6552 6.261381 TGTTAATCCTTCGTACTTGCAGTTTT 59.739 34.615 0.00 0.00 0.00 2.43
6019 6576 2.654749 TGAGGATCACGTACTTGCAG 57.345 50.000 0.00 0.00 42.56 4.41
6020 6577 1.204704 TGAGGATCACGTACTTGCAGG 59.795 52.381 0.00 0.00 42.56 4.85
6021 6578 0.108138 AGGATCACGTACTTGCAGGC 60.108 55.000 0.00 0.00 0.00 4.85
6085 6642 6.422400 GGCTGTGAATGTCTAAGCTATACTTC 59.578 42.308 0.00 0.00 39.97 3.01
6086 6643 6.422400 GCTGTGAATGTCTAAGCTATACTTCC 59.578 42.308 0.00 0.00 39.97 3.46
6087 6644 7.661536 TGTGAATGTCTAAGCTATACTTCCT 57.338 36.000 0.00 0.00 39.97 3.36
6088 6645 7.717568 TGTGAATGTCTAAGCTATACTTCCTC 58.282 38.462 0.00 0.00 39.97 3.71
6089 6646 7.149307 GTGAATGTCTAAGCTATACTTCCTCC 58.851 42.308 0.00 0.00 39.97 4.30
6090 6647 5.968528 ATGTCTAAGCTATACTTCCTCCG 57.031 43.478 0.00 0.00 39.97 4.63
6091 6648 4.789807 TGTCTAAGCTATACTTCCTCCGT 58.210 43.478 0.00 0.00 39.97 4.69
6092 6649 5.933617 TGTCTAAGCTATACTTCCTCCGTA 58.066 41.667 0.00 0.00 39.97 4.02
6093 6650 6.359804 TGTCTAAGCTATACTTCCTCCGTAA 58.640 40.000 0.00 0.00 39.97 3.18
6094 6651 6.830324 TGTCTAAGCTATACTTCCTCCGTAAA 59.170 38.462 0.00 0.00 39.97 2.01
6095 6652 7.138081 GTCTAAGCTATACTTCCTCCGTAAAC 58.862 42.308 0.00 0.00 39.97 2.01
6096 6653 7.013178 GTCTAAGCTATACTTCCTCCGTAAACT 59.987 40.741 0.00 0.00 39.97 2.66
6097 6654 8.213679 TCTAAGCTATACTTCCTCCGTAAACTA 58.786 37.037 0.00 0.00 39.97 2.24
6098 6655 7.651027 AAGCTATACTTCCTCCGTAAACTAA 57.349 36.000 0.00 0.00 30.77 2.24
6099 6656 7.836479 AGCTATACTTCCTCCGTAAACTAAT 57.164 36.000 0.00 0.00 0.00 1.73
6100 6657 8.930846 AGCTATACTTCCTCCGTAAACTAATA 57.069 34.615 0.00 0.00 0.00 0.98
6101 6658 9.531158 AGCTATACTTCCTCCGTAAACTAATAT 57.469 33.333 0.00 0.00 0.00 1.28
6107 6664 9.418839 ACTTCCTCCGTAAACTAATATAAGAGT 57.581 33.333 0.00 0.00 0.00 3.24
6108 6665 9.680315 CTTCCTCCGTAAACTAATATAAGAGTG 57.320 37.037 0.00 0.00 0.00 3.51
6109 6666 8.757982 TCCTCCGTAAACTAATATAAGAGTGT 57.242 34.615 0.00 0.00 0.00 3.55
6110 6667 9.193806 TCCTCCGTAAACTAATATAAGAGTGTT 57.806 33.333 0.00 0.00 0.00 3.32
6111 6668 9.813446 CCTCCGTAAACTAATATAAGAGTGTTT 57.187 33.333 0.00 0.00 0.00 2.83
6160 6717 9.517609 AACGCTCTTATATTAGTTTACAGAGTG 57.482 33.333 0.00 0.00 41.26 3.51
6161 6718 8.900781 ACGCTCTTATATTAGTTTACAGAGTGA 58.099 33.333 12.51 0.00 38.95 3.41
6162 6719 9.388346 CGCTCTTATATTAGTTTACAGAGTGAG 57.612 37.037 0.00 0.00 38.95 3.51
6172 6729 9.971922 TTAGTTTACAGAGTGAGTACCTTTTAC 57.028 33.333 0.00 0.00 0.00 2.01
6173 6730 7.144000 AGTTTACAGAGTGAGTACCTTTTACG 58.856 38.462 0.00 0.00 0.00 3.18
6174 6731 6.639632 TTACAGAGTGAGTACCTTTTACGT 57.360 37.500 0.00 0.00 0.00 3.57
6175 6732 5.526506 ACAGAGTGAGTACCTTTTACGTT 57.473 39.130 0.00 0.00 0.00 3.99
6176 6733 5.910614 ACAGAGTGAGTACCTTTTACGTTT 58.089 37.500 0.00 0.00 0.00 3.60
6177 6734 6.343703 ACAGAGTGAGTACCTTTTACGTTTT 58.656 36.000 0.00 0.00 0.00 2.43
6178 6735 6.478016 ACAGAGTGAGTACCTTTTACGTTTTC 59.522 38.462 0.00 0.00 0.00 2.29
6179 6736 6.700520 CAGAGTGAGTACCTTTTACGTTTTCT 59.299 38.462 0.00 0.00 0.00 2.52
6180 6737 6.700520 AGAGTGAGTACCTTTTACGTTTTCTG 59.299 38.462 0.00 0.00 0.00 3.02
6181 6738 6.343703 AGTGAGTACCTTTTACGTTTTCTGT 58.656 36.000 0.00 0.00 0.00 3.41
6182 6739 6.257193 AGTGAGTACCTTTTACGTTTTCTGTG 59.743 38.462 0.00 0.00 0.00 3.66
6183 6740 6.256321 GTGAGTACCTTTTACGTTTTCTGTGA 59.744 38.462 0.00 0.00 0.00 3.58
6184 6741 6.817641 TGAGTACCTTTTACGTTTTCTGTGAA 59.182 34.615 0.00 0.00 0.00 3.18
6185 6742 7.333921 TGAGTACCTTTTACGTTTTCTGTGAAA 59.666 33.333 0.00 0.00 0.00 2.69
6186 6743 7.466805 AGTACCTTTTACGTTTTCTGTGAAAC 58.533 34.615 0.00 0.00 36.43 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.435186 GGAGGTCCGCAAAGCTGC 61.435 66.667 0.00 0.00 45.75 5.25
12 13 1.172180 TTTGGAGGTCCGCAAAGCTG 61.172 55.000 0.00 0.00 39.43 4.24
13 14 0.890996 CTTTGGAGGTCCGCAAAGCT 60.891 55.000 0.00 0.00 39.43 3.74
14 15 1.172812 ACTTTGGAGGTCCGCAAAGC 61.173 55.000 0.00 0.00 36.95 3.51
15 16 0.593128 CACTTTGGAGGTCCGCAAAG 59.407 55.000 0.00 0.00 38.19 2.77
16 17 0.821711 CCACTTTGGAGGTCCGCAAA 60.822 55.000 0.00 0.00 40.96 3.68
17 18 1.228124 CCACTTTGGAGGTCCGCAA 60.228 57.895 0.00 0.00 40.96 4.85
18 19 2.429930 CCACTTTGGAGGTCCGCA 59.570 61.111 0.00 0.00 40.96 5.69
19 20 3.056328 GCCACTTTGGAGGTCCGC 61.056 66.667 0.00 0.00 40.96 5.54
20 21 1.376037 GAGCCACTTTGGAGGTCCG 60.376 63.158 0.00 0.00 40.96 4.79
21 22 0.606673 GTGAGCCACTTTGGAGGTCC 60.607 60.000 0.00 0.00 40.96 4.46
22 23 0.606673 GGTGAGCCACTTTGGAGGTC 60.607 60.000 0.00 0.00 40.96 3.85
23 24 1.352622 TGGTGAGCCACTTTGGAGGT 61.353 55.000 0.00 0.00 40.96 3.85
24 25 0.178992 TTGGTGAGCCACTTTGGAGG 60.179 55.000 0.00 0.00 46.01 4.30
25 26 1.691196 TTTGGTGAGCCACTTTGGAG 58.309 50.000 0.00 0.00 46.01 3.86
26 27 2.031120 CTTTTGGTGAGCCACTTTGGA 58.969 47.619 0.00 0.00 46.01 3.53
27 28 1.756538 ACTTTTGGTGAGCCACTTTGG 59.243 47.619 5.48 0.00 46.01 3.28
38 39 1.538849 GCAAGGGCTTCACTTTTGGTG 60.539 52.381 0.00 0.00 41.18 4.17
39 40 0.752658 GCAAGGGCTTCACTTTTGGT 59.247 50.000 0.00 0.00 36.96 3.67
40 41 0.033920 GGCAAGGGCTTCACTTTTGG 59.966 55.000 0.00 0.00 40.87 3.28
41 42 0.318955 CGGCAAGGGCTTCACTTTTG 60.319 55.000 0.00 0.00 40.87 2.44
42 43 0.755327 ACGGCAAGGGCTTCACTTTT 60.755 50.000 0.00 0.00 40.87 2.27
43 44 0.755327 AACGGCAAGGGCTTCACTTT 60.755 50.000 0.00 0.00 40.87 2.66
44 45 1.152756 AACGGCAAGGGCTTCACTT 60.153 52.632 0.00 0.00 40.87 3.16
45 46 1.898574 CAACGGCAAGGGCTTCACT 60.899 57.895 0.00 0.00 40.87 3.41
46 47 1.452145 TTCAACGGCAAGGGCTTCAC 61.452 55.000 0.00 0.00 40.87 3.18
47 48 1.152860 TTCAACGGCAAGGGCTTCA 60.153 52.632 0.00 0.00 40.87 3.02
48 49 1.285950 GTTCAACGGCAAGGGCTTC 59.714 57.895 0.00 0.00 40.87 3.86
49 50 2.551912 CGTTCAACGGCAAGGGCTT 61.552 57.895 0.61 0.00 38.08 4.35
50 51 2.951475 TTCGTTCAACGGCAAGGGCT 62.951 55.000 10.69 0.00 42.81 5.19
51 52 1.862602 ATTCGTTCAACGGCAAGGGC 61.863 55.000 10.69 0.00 42.81 5.19
52 53 0.168128 GATTCGTTCAACGGCAAGGG 59.832 55.000 10.69 0.00 42.81 3.95
53 54 0.871722 TGATTCGTTCAACGGCAAGG 59.128 50.000 10.69 0.00 42.81 3.61
54 55 1.798223 TCTGATTCGTTCAACGGCAAG 59.202 47.619 10.69 3.48 42.81 4.01
55 56 1.529438 GTCTGATTCGTTCAACGGCAA 59.471 47.619 10.69 0.00 42.81 4.52
56 57 1.144969 GTCTGATTCGTTCAACGGCA 58.855 50.000 10.69 5.55 42.81 5.69
57 58 0.442699 GGTCTGATTCGTTCAACGGC 59.557 55.000 10.69 0.72 42.81 5.68
58 59 1.726791 CAGGTCTGATTCGTTCAACGG 59.273 52.381 10.69 0.00 42.81 4.44
59 60 1.726791 CCAGGTCTGATTCGTTCAACG 59.273 52.381 2.64 2.64 44.19 4.10
60 61 2.076863 CCCAGGTCTGATTCGTTCAAC 58.923 52.381 0.00 0.00 32.78 3.18
61 62 1.610624 GCCCAGGTCTGATTCGTTCAA 60.611 52.381 0.00 0.00 32.78 2.69
62 63 0.036388 GCCCAGGTCTGATTCGTTCA 60.036 55.000 0.00 0.00 0.00 3.18
63 64 0.036388 TGCCCAGGTCTGATTCGTTC 60.036 55.000 0.00 0.00 0.00 3.95
64 65 0.400213 TTGCCCAGGTCTGATTCGTT 59.600 50.000 0.00 0.00 0.00 3.85
65 66 0.321653 GTTGCCCAGGTCTGATTCGT 60.322 55.000 0.00 0.00 0.00 3.85
66 67 0.321564 TGTTGCCCAGGTCTGATTCG 60.322 55.000 0.00 0.00 0.00 3.34
67 68 1.168714 GTGTTGCCCAGGTCTGATTC 58.831 55.000 0.00 0.00 0.00 2.52
68 69 0.251341 GGTGTTGCCCAGGTCTGATT 60.251 55.000 0.00 0.00 0.00 2.57
69 70 1.380302 GGTGTTGCCCAGGTCTGAT 59.620 57.895 0.00 0.00 0.00 2.90
70 71 2.836154 GGTGTTGCCCAGGTCTGA 59.164 61.111 0.00 0.00 0.00 3.27
79 80 4.572571 TGTGTCCGGGGTGTTGCC 62.573 66.667 0.00 0.00 0.00 4.52
80 81 3.284449 GTGTGTCCGGGGTGTTGC 61.284 66.667 0.00 0.00 0.00 4.17
81 82 2.593436 GGTGTGTCCGGGGTGTTG 60.593 66.667 0.00 0.00 0.00 3.33
82 83 2.406002 GATGGTGTGTCCGGGGTGTT 62.406 60.000 0.00 0.00 39.52 3.32
83 84 2.852075 ATGGTGTGTCCGGGGTGT 60.852 61.111 0.00 0.00 39.52 4.16
84 85 2.046314 GATGGTGTGTCCGGGGTG 60.046 66.667 0.00 0.00 39.52 4.61
85 86 3.702048 CGATGGTGTGTCCGGGGT 61.702 66.667 0.00 0.00 39.52 4.95
86 87 2.949909 TTCGATGGTGTGTCCGGGG 61.950 63.158 0.00 0.00 39.52 5.73
87 88 1.740296 GTTCGATGGTGTGTCCGGG 60.740 63.158 0.00 0.00 39.52 5.73
88 89 0.736325 GAGTTCGATGGTGTGTCCGG 60.736 60.000 0.00 0.00 39.52 5.14
89 90 0.736325 GGAGTTCGATGGTGTGTCCG 60.736 60.000 0.00 0.00 39.52 4.79
90 91 0.320374 TGGAGTTCGATGGTGTGTCC 59.680 55.000 0.00 0.00 0.00 4.02
91 92 1.272490 TCTGGAGTTCGATGGTGTGTC 59.728 52.381 0.00 0.00 0.00 3.67
92 93 1.338107 TCTGGAGTTCGATGGTGTGT 58.662 50.000 0.00 0.00 0.00 3.72
93 94 2.167281 AGATCTGGAGTTCGATGGTGTG 59.833 50.000 0.00 0.00 0.00 3.82
94 95 2.167281 CAGATCTGGAGTTCGATGGTGT 59.833 50.000 15.38 0.00 0.00 4.16
95 96 2.819115 CAGATCTGGAGTTCGATGGTG 58.181 52.381 15.38 0.00 0.00 4.17
114 115 1.116536 TTAGTCGTGGTGGAGTGCCA 61.117 55.000 0.00 0.00 43.47 4.92
115 116 0.389948 CTTAGTCGTGGTGGAGTGCC 60.390 60.000 0.00 0.00 0.00 5.01
116 117 0.601558 TCTTAGTCGTGGTGGAGTGC 59.398 55.000 0.00 0.00 0.00 4.40
117 118 1.401148 CGTCTTAGTCGTGGTGGAGTG 60.401 57.143 0.00 0.00 0.00 3.51
118 119 0.879765 CGTCTTAGTCGTGGTGGAGT 59.120 55.000 0.00 0.00 0.00 3.85
119 120 0.456312 GCGTCTTAGTCGTGGTGGAG 60.456 60.000 0.68 0.00 0.00 3.86
120 121 1.582968 GCGTCTTAGTCGTGGTGGA 59.417 57.895 0.68 0.00 0.00 4.02
121 122 1.445582 GGCGTCTTAGTCGTGGTGG 60.446 63.158 0.68 0.00 0.00 4.61
122 123 1.800315 CGGCGTCTTAGTCGTGGTG 60.800 63.158 0.00 0.00 34.13 4.17
123 124 1.518056 TTCGGCGTCTTAGTCGTGGT 61.518 55.000 6.85 0.00 40.52 4.16
124 125 0.797249 CTTCGGCGTCTTAGTCGTGG 60.797 60.000 6.85 0.00 40.52 4.94
125 126 0.797249 CCTTCGGCGTCTTAGTCGTG 60.797 60.000 6.85 0.00 40.52 4.35
126 127 0.957395 TCCTTCGGCGTCTTAGTCGT 60.957 55.000 6.85 0.00 40.52 4.34
127 128 0.248134 CTCCTTCGGCGTCTTAGTCG 60.248 60.000 6.85 0.00 41.09 4.18
128 129 0.100861 CCTCCTTCGGCGTCTTAGTC 59.899 60.000 6.85 0.00 0.00 2.59
129 130 0.323178 TCCTCCTTCGGCGTCTTAGT 60.323 55.000 6.85 0.00 0.00 2.24
130 131 0.815734 TTCCTCCTTCGGCGTCTTAG 59.184 55.000 6.85 0.84 0.00 2.18
131 132 1.067354 GTTTCCTCCTTCGGCGTCTTA 60.067 52.381 6.85 0.00 0.00 2.10
132 133 0.320508 GTTTCCTCCTTCGGCGTCTT 60.321 55.000 6.85 0.00 0.00 3.01
133 134 1.292541 GTTTCCTCCTTCGGCGTCT 59.707 57.895 6.85 0.00 0.00 4.18
134 135 1.740664 GGTTTCCTCCTTCGGCGTC 60.741 63.158 6.85 0.00 0.00 5.19
135 136 1.838073 ATGGTTTCCTCCTTCGGCGT 61.838 55.000 6.85 0.00 0.00 5.68
136 137 0.177141 TATGGTTTCCTCCTTCGGCG 59.823 55.000 0.00 0.00 0.00 6.46
137 138 1.664873 GTATGGTTTCCTCCTTCGGC 58.335 55.000 0.00 0.00 0.00 5.54
138 139 1.838077 AGGTATGGTTTCCTCCTTCGG 59.162 52.381 0.00 0.00 0.00 4.30
139 140 3.532542 GAAGGTATGGTTTCCTCCTTCG 58.467 50.000 15.37 0.00 42.63 3.79
141 142 3.265489 TGGAAGGTATGGTTTCCTCCTT 58.735 45.455 5.03 0.00 42.67 3.36
142 143 2.929301 TGGAAGGTATGGTTTCCTCCT 58.071 47.619 5.03 0.00 42.67 3.69
143 144 3.435169 GGATGGAAGGTATGGTTTCCTCC 60.435 52.174 5.03 5.71 42.67 4.30
144 145 3.202151 TGGATGGAAGGTATGGTTTCCTC 59.798 47.826 5.03 1.15 42.67 3.71
145 146 3.053619 GTGGATGGAAGGTATGGTTTCCT 60.054 47.826 5.03 0.00 42.67 3.36
146 147 3.288092 GTGGATGGAAGGTATGGTTTCC 58.712 50.000 0.00 0.00 42.56 3.13
147 148 3.963129 TGTGGATGGAAGGTATGGTTTC 58.037 45.455 0.00 0.00 0.00 2.78
148 149 4.396357 TTGTGGATGGAAGGTATGGTTT 57.604 40.909 0.00 0.00 0.00 3.27
149 150 4.086457 GTTTGTGGATGGAAGGTATGGTT 58.914 43.478 0.00 0.00 0.00 3.67
150 151 3.563479 GGTTTGTGGATGGAAGGTATGGT 60.563 47.826 0.00 0.00 0.00 3.55
151 152 3.023832 GGTTTGTGGATGGAAGGTATGG 58.976 50.000 0.00 0.00 0.00 2.74
152 153 3.443681 GTGGTTTGTGGATGGAAGGTATG 59.556 47.826 0.00 0.00 0.00 2.39
153 154 3.697166 GTGGTTTGTGGATGGAAGGTAT 58.303 45.455 0.00 0.00 0.00 2.73
154 155 2.551287 CGTGGTTTGTGGATGGAAGGTA 60.551 50.000 0.00 0.00 0.00 3.08
155 156 1.817740 CGTGGTTTGTGGATGGAAGGT 60.818 52.381 0.00 0.00 0.00 3.50
156 157 0.881118 CGTGGTTTGTGGATGGAAGG 59.119 55.000 0.00 0.00 0.00 3.46
157 158 1.890876 TCGTGGTTTGTGGATGGAAG 58.109 50.000 0.00 0.00 0.00 3.46
158 159 1.950909 GTTCGTGGTTTGTGGATGGAA 59.049 47.619 0.00 0.00 0.00 3.53
159 160 1.600023 GTTCGTGGTTTGTGGATGGA 58.400 50.000 0.00 0.00 0.00 3.41
160 161 0.596082 GGTTCGTGGTTTGTGGATGG 59.404 55.000 0.00 0.00 0.00 3.51
161 162 0.596082 GGGTTCGTGGTTTGTGGATG 59.404 55.000 0.00 0.00 0.00 3.51
162 163 0.183971 TGGGTTCGTGGTTTGTGGAT 59.816 50.000 0.00 0.00 0.00 3.41
163 164 0.464735 CTGGGTTCGTGGTTTGTGGA 60.465 55.000 0.00 0.00 0.00 4.02
164 165 0.750182 ACTGGGTTCGTGGTTTGTGG 60.750 55.000 0.00 0.00 0.00 4.17
165 166 1.871039 CTACTGGGTTCGTGGTTTGTG 59.129 52.381 0.00 0.00 0.00 3.33
166 167 1.764134 TCTACTGGGTTCGTGGTTTGT 59.236 47.619 0.00 0.00 0.00 2.83
167 168 2.536761 TCTACTGGGTTCGTGGTTTG 57.463 50.000 0.00 0.00 0.00 2.93
168 169 5.425630 GAATATCTACTGGGTTCGTGGTTT 58.574 41.667 0.00 0.00 0.00 3.27
169 170 4.141779 GGAATATCTACTGGGTTCGTGGTT 60.142 45.833 0.00 0.00 0.00 3.67
170 171 3.387050 GGAATATCTACTGGGTTCGTGGT 59.613 47.826 0.00 0.00 0.00 4.16
171 172 3.552273 CGGAATATCTACTGGGTTCGTGG 60.552 52.174 0.00 0.00 0.00 4.94
172 173 3.067742 ACGGAATATCTACTGGGTTCGTG 59.932 47.826 0.00 0.00 0.00 4.35
173 174 3.294214 ACGGAATATCTACTGGGTTCGT 58.706 45.455 0.00 0.00 0.00 3.85
174 175 3.568853 AGACGGAATATCTACTGGGTTCG 59.431 47.826 0.00 0.00 0.00 3.95
175 176 5.509332 GGAAGACGGAATATCTACTGGGTTC 60.509 48.000 0.00 0.00 0.00 3.62
176 177 4.344390 GGAAGACGGAATATCTACTGGGTT 59.656 45.833 0.00 0.00 0.00 4.11
177 178 3.896272 GGAAGACGGAATATCTACTGGGT 59.104 47.826 0.00 0.00 0.00 4.51
178 179 3.895656 TGGAAGACGGAATATCTACTGGG 59.104 47.826 0.00 0.00 0.00 4.45
179 180 4.827835 TCTGGAAGACGGAATATCTACTGG 59.172 45.833 0.00 0.00 38.67 4.00
195 196 3.312697 TCTGTATCGACGACATCTGGAAG 59.687 47.826 0.00 0.00 0.00 3.46
196 197 3.064958 GTCTGTATCGACGACATCTGGAA 59.935 47.826 0.00 0.00 32.69 3.53
197 198 2.612672 GTCTGTATCGACGACATCTGGA 59.387 50.000 0.00 0.00 32.69 3.86
198 199 2.287069 GGTCTGTATCGACGACATCTGG 60.287 54.545 0.00 0.00 34.75 3.86
199 200 2.354821 TGGTCTGTATCGACGACATCTG 59.645 50.000 0.00 0.00 34.75 2.90
200 201 2.355132 GTGGTCTGTATCGACGACATCT 59.645 50.000 0.00 0.00 40.81 2.90
201 202 2.096980 TGTGGTCTGTATCGACGACATC 59.903 50.000 0.00 0.00 44.20 3.06
202 203 2.089201 TGTGGTCTGTATCGACGACAT 58.911 47.619 0.00 0.00 44.20 3.06
203 204 1.525941 TGTGGTCTGTATCGACGACA 58.474 50.000 0.00 4.97 45.95 4.35
204 205 2.624316 TTGTGGTCTGTATCGACGAC 57.376 50.000 0.00 0.00 41.29 4.34
205 206 3.014623 AGATTGTGGTCTGTATCGACGA 58.985 45.455 0.00 0.00 34.75 4.20
206 207 3.108881 CAGATTGTGGTCTGTATCGACG 58.891 50.000 0.00 0.00 40.54 5.12
207 208 2.860735 GCAGATTGTGGTCTGTATCGAC 59.139 50.000 5.87 0.00 45.80 4.20
208 209 2.495669 TGCAGATTGTGGTCTGTATCGA 59.504 45.455 5.87 0.00 45.80 3.59
209 210 2.892374 TGCAGATTGTGGTCTGTATCG 58.108 47.619 5.87 0.00 45.80 2.92
212 213 2.418609 CGGATGCAGATTGTGGTCTGTA 60.419 50.000 5.87 1.87 45.80 2.74
213 214 1.676916 CGGATGCAGATTGTGGTCTGT 60.677 52.381 5.87 0.00 45.80 3.41
214 215 1.012086 CGGATGCAGATTGTGGTCTG 58.988 55.000 0.00 0.00 46.59 3.51
215 216 0.745845 GCGGATGCAGATTGTGGTCT 60.746 55.000 0.00 0.00 42.15 3.85
216 217 0.745845 AGCGGATGCAGATTGTGGTC 60.746 55.000 0.00 0.00 46.23 4.02
217 218 0.745845 GAGCGGATGCAGATTGTGGT 60.746 55.000 0.00 0.00 46.23 4.16
218 219 1.442526 GGAGCGGATGCAGATTGTGG 61.443 60.000 0.00 0.00 46.23 4.17
219 220 0.463295 AGGAGCGGATGCAGATTGTG 60.463 55.000 0.00 0.00 46.23 3.33
220 221 0.463295 CAGGAGCGGATGCAGATTGT 60.463 55.000 0.00 0.00 46.23 2.71
221 222 1.164662 CCAGGAGCGGATGCAGATTG 61.165 60.000 0.00 0.00 46.23 2.67
222 223 1.147824 CCAGGAGCGGATGCAGATT 59.852 57.895 0.00 0.00 46.23 2.40
223 224 1.763655 TCCAGGAGCGGATGCAGAT 60.764 57.895 0.00 0.00 46.23 2.90
224 225 2.364186 TCCAGGAGCGGATGCAGA 60.364 61.111 0.00 0.00 46.23 4.26
225 226 1.395045 TAGTCCAGGAGCGGATGCAG 61.395 60.000 0.00 0.00 46.23 4.41
226 227 1.381191 TAGTCCAGGAGCGGATGCA 60.381 57.895 0.00 0.00 46.23 3.96
227 228 1.068250 GTAGTCCAGGAGCGGATGC 59.932 63.158 0.00 0.00 37.41 3.91
228 229 0.757188 AGGTAGTCCAGGAGCGGATG 60.757 60.000 0.00 0.00 37.41 3.51
229 230 0.468400 GAGGTAGTCCAGGAGCGGAT 60.468 60.000 0.00 0.00 37.41 4.18
230 231 1.076923 GAGGTAGTCCAGGAGCGGA 60.077 63.158 0.00 0.00 35.89 5.54
231 232 2.128507 GGAGGTAGTCCAGGAGCGG 61.129 68.421 0.00 0.00 46.10 5.52
232 233 3.527641 GGAGGTAGTCCAGGAGCG 58.472 66.667 0.00 0.00 46.10 5.03
238 239 6.801256 TCTGGAAGTTTGGGAGGTAGTCCA 62.801 50.000 0.00 0.00 40.88 4.02
239 240 1.982958 TGGAAGTTTGGGAGGTAGTCC 59.017 52.381 0.00 0.00 46.10 3.85
240 241 2.904434 TCTGGAAGTTTGGGAGGTAGTC 59.096 50.000 0.00 0.00 33.76 2.59
241 242 2.986050 TCTGGAAGTTTGGGAGGTAGT 58.014 47.619 0.00 0.00 33.76 2.73
242 243 3.264450 ACATCTGGAAGTTTGGGAGGTAG 59.736 47.826 0.00 0.00 33.76 3.18
243 244 3.256704 ACATCTGGAAGTTTGGGAGGTA 58.743 45.455 0.00 0.00 33.76 3.08
244 245 2.040412 GACATCTGGAAGTTTGGGAGGT 59.960 50.000 0.00 0.00 33.76 3.85
245 246 2.716217 GACATCTGGAAGTTTGGGAGG 58.284 52.381 0.00 0.00 33.76 4.30
246 247 2.289694 ACGACATCTGGAAGTTTGGGAG 60.290 50.000 0.00 0.00 33.76 4.30
247 248 1.697432 ACGACATCTGGAAGTTTGGGA 59.303 47.619 0.00 0.00 33.76 4.37
248 249 2.185004 ACGACATCTGGAAGTTTGGG 57.815 50.000 0.00 0.00 33.76 4.12
249 250 3.138304 TCAACGACATCTGGAAGTTTGG 58.862 45.455 0.00 0.00 33.76 3.28
250 251 4.811555 TTCAACGACATCTGGAAGTTTG 57.188 40.909 0.00 0.00 33.76 2.93
251 252 5.762045 CATTTCAACGACATCTGGAAGTTT 58.238 37.500 0.00 0.00 33.76 2.66
252 253 4.320494 GCATTTCAACGACATCTGGAAGTT 60.320 41.667 0.00 0.00 33.76 2.66
253 254 3.189287 GCATTTCAACGACATCTGGAAGT 59.811 43.478 0.00 0.00 33.76 3.01
254 255 3.426695 GGCATTTCAACGACATCTGGAAG 60.427 47.826 0.00 0.00 0.00 3.46
255 256 2.487762 GGCATTTCAACGACATCTGGAA 59.512 45.455 0.00 0.00 0.00 3.53
256 257 2.083774 GGCATTTCAACGACATCTGGA 58.916 47.619 0.00 0.00 0.00 3.86
257 258 1.133025 GGGCATTTCAACGACATCTGG 59.867 52.381 0.00 0.00 0.00 3.86
258 259 2.086869 AGGGCATTTCAACGACATCTG 58.913 47.619 0.00 0.00 0.00 2.90
259 260 2.496899 AGGGCATTTCAACGACATCT 57.503 45.000 0.00 0.00 0.00 2.90
260 261 3.575965 AAAGGGCATTTCAACGACATC 57.424 42.857 0.00 0.00 0.00 3.06
261 262 4.321675 GGTTAAAGGGCATTTCAACGACAT 60.322 41.667 0.00 0.00 32.01 3.06
262 263 3.004944 GGTTAAAGGGCATTTCAACGACA 59.995 43.478 0.00 0.00 32.01 4.35
263 264 3.571571 GGTTAAAGGGCATTTCAACGAC 58.428 45.455 0.00 0.00 32.01 4.34
264 265 2.559231 GGGTTAAAGGGCATTTCAACGA 59.441 45.455 0.00 0.00 32.01 3.85
265 266 2.297597 TGGGTTAAAGGGCATTTCAACG 59.702 45.455 0.00 0.00 32.01 4.10
266 267 4.062293 GTTGGGTTAAAGGGCATTTCAAC 58.938 43.478 0.00 5.82 29.86 3.18
267 268 3.071747 GGTTGGGTTAAAGGGCATTTCAA 59.928 43.478 0.00 0.00 32.01 2.69
268 269 2.635427 GGTTGGGTTAAAGGGCATTTCA 59.365 45.455 0.00 0.00 32.01 2.69
269 270 2.353307 CGGTTGGGTTAAAGGGCATTTC 60.353 50.000 0.00 0.00 32.01 2.17
270 271 1.621317 CGGTTGGGTTAAAGGGCATTT 59.379 47.619 1.66 1.66 34.72 2.32
271 272 1.203075 TCGGTTGGGTTAAAGGGCATT 60.203 47.619 0.00 0.00 0.00 3.56
272 273 0.406361 TCGGTTGGGTTAAAGGGCAT 59.594 50.000 0.00 0.00 0.00 4.40
273 274 0.406361 ATCGGTTGGGTTAAAGGGCA 59.594 50.000 0.00 0.00 0.00 5.36
274 275 1.100510 GATCGGTTGGGTTAAAGGGC 58.899 55.000 0.00 0.00 0.00 5.19
275 276 1.375551 CGATCGGTTGGGTTAAAGGG 58.624 55.000 7.38 0.00 0.00 3.95
276 277 1.375551 CCGATCGGTTGGGTTAAAGG 58.624 55.000 26.35 0.00 0.00 3.11
294 295 0.808453 TAATTACCTCGCGCTGCACC 60.808 55.000 5.56 0.00 0.00 5.01
295 296 1.070577 CATAATTACCTCGCGCTGCAC 60.071 52.381 5.56 0.00 0.00 4.57
296 297 1.202475 TCATAATTACCTCGCGCTGCA 60.202 47.619 5.56 0.00 0.00 4.41
297 298 1.192534 GTCATAATTACCTCGCGCTGC 59.807 52.381 5.56 0.00 0.00 5.25
298 299 2.469826 TGTCATAATTACCTCGCGCTG 58.530 47.619 5.56 0.00 0.00 5.18
299 300 2.882927 TGTCATAATTACCTCGCGCT 57.117 45.000 5.56 0.00 0.00 5.92
300 301 2.864343 ACTTGTCATAATTACCTCGCGC 59.136 45.455 0.00 0.00 0.00 6.86
301 302 4.782195 GCAACTTGTCATAATTACCTCGCG 60.782 45.833 0.00 0.00 0.00 5.87
302 303 4.495844 GGCAACTTGTCATAATTACCTCGC 60.496 45.833 0.00 0.00 0.00 5.03
303 304 4.634004 TGGCAACTTGTCATAATTACCTCG 59.366 41.667 0.00 0.00 37.61 4.63
304 305 6.151144 ACTTGGCAACTTGTCATAATTACCTC 59.849 38.462 0.00 0.00 29.04 3.85
305 306 6.010219 ACTTGGCAACTTGTCATAATTACCT 58.990 36.000 0.00 0.00 29.04 3.08
306 307 6.267496 ACTTGGCAACTTGTCATAATTACC 57.733 37.500 0.00 0.00 29.04 2.85
307 308 8.040716 ACTACTTGGCAACTTGTCATAATTAC 57.959 34.615 0.00 0.00 29.04 1.89
308 309 9.378551 CTACTACTTGGCAACTTGTCATAATTA 57.621 33.333 0.00 0.00 29.04 1.40
309 310 7.883311 ACTACTACTTGGCAACTTGTCATAATT 59.117 33.333 0.00 0.00 29.04 1.40
310 311 7.394816 ACTACTACTTGGCAACTTGTCATAAT 58.605 34.615 0.00 0.00 29.04 1.28
311 312 6.765403 ACTACTACTTGGCAACTTGTCATAA 58.235 36.000 0.00 0.00 29.04 1.90
312 313 6.354794 ACTACTACTTGGCAACTTGTCATA 57.645 37.500 0.00 0.00 29.04 2.15
313 314 5.228945 ACTACTACTTGGCAACTTGTCAT 57.771 39.130 0.00 0.00 29.04 3.06
314 315 4.682778 ACTACTACTTGGCAACTTGTCA 57.317 40.909 0.00 0.00 37.61 3.58
315 316 5.404667 GTGTACTACTACTTGGCAACTTGTC 59.595 44.000 0.00 0.00 37.61 3.18
316 317 5.295152 GTGTACTACTACTTGGCAACTTGT 58.705 41.667 0.00 0.00 37.61 3.16
317 318 4.384846 CGTGTACTACTACTTGGCAACTTG 59.615 45.833 0.00 0.00 37.61 3.16
318 319 4.279169 TCGTGTACTACTACTTGGCAACTT 59.721 41.667 0.00 0.00 37.61 2.66
319 320 3.822735 TCGTGTACTACTACTTGGCAACT 59.177 43.478 0.00 0.00 37.61 3.16
320 321 3.916776 GTCGTGTACTACTACTTGGCAAC 59.083 47.826 0.00 0.00 0.00 4.17
321 322 3.569277 TGTCGTGTACTACTACTTGGCAA 59.431 43.478 0.00 0.00 0.00 4.52
322 323 3.148412 TGTCGTGTACTACTACTTGGCA 58.852 45.455 0.00 0.00 0.00 4.92
323 324 3.837213 TGTCGTGTACTACTACTTGGC 57.163 47.619 0.00 0.00 0.00 4.52
324 325 7.081526 ACTTATGTCGTGTACTACTACTTGG 57.918 40.000 0.00 0.00 0.00 3.61
325 326 8.961294 AAACTTATGTCGTGTACTACTACTTG 57.039 34.615 0.00 0.00 0.00 3.16
326 327 9.617975 GAAAACTTATGTCGTGTACTACTACTT 57.382 33.333 0.00 0.00 0.00 2.24
327 328 9.007901 AGAAAACTTATGTCGTGTACTACTACT 57.992 33.333 0.00 0.00 0.00 2.57
328 329 9.617975 AAGAAAACTTATGTCGTGTACTACTAC 57.382 33.333 0.00 0.00 0.00 2.73
330 331 9.538508 AAAAGAAAACTTATGTCGTGTACTACT 57.461 29.630 0.00 0.00 0.00 2.57
376 377 8.440833 GCTAAATTGTTGTAGTCGACATAAGTT 58.559 33.333 19.50 9.32 38.07 2.66
377 378 7.601130 TGCTAAATTGTTGTAGTCGACATAAGT 59.399 33.333 19.50 0.00 38.07 2.24
378 379 7.898309 GTGCTAAATTGTTGTAGTCGACATAAG 59.102 37.037 19.50 3.53 38.07 1.73
379 380 7.385478 TGTGCTAAATTGTTGTAGTCGACATAA 59.615 33.333 19.50 6.69 38.07 1.90
380 381 6.869388 TGTGCTAAATTGTTGTAGTCGACATA 59.131 34.615 19.50 4.50 38.07 2.29
381 382 5.699001 TGTGCTAAATTGTTGTAGTCGACAT 59.301 36.000 19.50 5.54 38.07 3.06
382 383 5.051153 TGTGCTAAATTGTTGTAGTCGACA 58.949 37.500 19.50 0.48 36.31 4.35
383 384 5.585500 TGTGCTAAATTGTTGTAGTCGAC 57.415 39.130 7.70 7.70 0.00 4.20
384 385 4.151689 GCTGTGCTAAATTGTTGTAGTCGA 59.848 41.667 0.00 0.00 0.00 4.20
385 386 4.394795 GCTGTGCTAAATTGTTGTAGTCG 58.605 43.478 0.00 0.00 0.00 4.18
386 387 4.084013 ACGCTGTGCTAAATTGTTGTAGTC 60.084 41.667 0.00 0.00 0.00 2.59
387 388 3.813166 ACGCTGTGCTAAATTGTTGTAGT 59.187 39.130 0.00 0.00 0.00 2.73
388 389 4.404507 ACGCTGTGCTAAATTGTTGTAG 57.595 40.909 0.00 0.00 0.00 2.74
389 390 4.750598 TGTACGCTGTGCTAAATTGTTGTA 59.249 37.500 0.00 0.00 0.00 2.41
390 391 3.562141 TGTACGCTGTGCTAAATTGTTGT 59.438 39.130 0.00 0.00 0.00 3.32
424 425 5.332280 GGAAGCAAATTCGTGTTTGTAAAGC 60.332 40.000 13.75 0.00 40.38 3.51
465 470 0.035439 ACTTGGGCATTGGACTACGG 60.035 55.000 0.00 0.00 0.00 4.02
540 548 1.292992 CGGGCCTGGTCGTAATTAAC 58.707 55.000 2.57 0.00 0.00 2.01
541 549 0.462403 GCGGGCCTGGTCGTAATTAA 60.462 55.000 15.02 0.00 0.00 1.40
543 551 2.124860 GCGGGCCTGGTCGTAATT 60.125 61.111 15.02 0.00 0.00 1.40
544 552 3.081409 AGCGGGCCTGGTCGTAAT 61.081 61.111 11.46 0.00 0.00 1.89
566 577 2.256461 GCCGACTTGCCTTGCTTG 59.744 61.111 0.00 0.00 0.00 4.01
691 707 0.103937 GAGAAGAGGGCATCCACGAG 59.896 60.000 0.00 0.00 34.83 4.18
744 760 3.061161 CCTGCTTTGCGATATTTGTTTGC 59.939 43.478 0.00 0.00 0.00 3.68
935 980 4.658786 AACCCCAGGAGAGCCCGT 62.659 66.667 0.00 0.00 40.87 5.28
1023 1068 2.365617 AGAAGAAGAAACGCACCTCTCA 59.634 45.455 0.00 0.00 0.00 3.27
1034 1079 8.307483 ACATTGATAGACGAGAAGAAGAAGAAA 58.693 33.333 0.00 0.00 0.00 2.52
1047 1096 0.030235 CCGCCGACATTGATAGACGA 59.970 55.000 0.00 0.00 0.00 4.20
1048 1097 0.248907 ACCGCCGACATTGATAGACG 60.249 55.000 0.00 0.00 0.00 4.18
1049 1098 1.859080 GAACCGCCGACATTGATAGAC 59.141 52.381 0.00 0.00 0.00 2.59
1050 1099 1.754803 AGAACCGCCGACATTGATAGA 59.245 47.619 0.00 0.00 0.00 1.98
1051 1100 2.225068 AGAACCGCCGACATTGATAG 57.775 50.000 0.00 0.00 0.00 2.08
1052 1101 2.276201 CAAGAACCGCCGACATTGATA 58.724 47.619 0.00 0.00 0.00 2.15
1053 1102 1.086696 CAAGAACCGCCGACATTGAT 58.913 50.000 0.00 0.00 0.00 2.57
1056 1105 1.274167 TCTACAAGAACCGCCGACATT 59.726 47.619 0.00 0.00 0.00 2.71
1285 1377 2.605818 CCAATGTAACGGTATGGACACG 59.394 50.000 0.00 0.00 32.82 4.49
1421 1515 7.443575 GCAATGTAGTTCAGGTAATCATCTCAT 59.556 37.037 0.00 0.00 0.00 2.90
1435 1529 3.743521 ACAGCAGAAGCAATGTAGTTCA 58.256 40.909 0.00 0.00 45.49 3.18
1440 1534 5.704978 TCAATTGTACAGCAGAAGCAATGTA 59.295 36.000 5.13 0.00 45.49 2.29
1483 1578 5.471456 AGTTTCCAAGCTTATCTGACACTTG 59.529 40.000 0.00 0.00 37.94 3.16
1509 1604 7.537715 TGTAAGAGCACAACATCAAATATTGG 58.462 34.615 0.00 0.00 0.00 3.16
1574 1669 2.113139 CTGGGACAAACGGGCTGT 59.887 61.111 0.00 0.00 38.70 4.40
1975 2070 4.234019 GGCATGTATGGCCGTGAA 57.766 55.556 8.05 0.00 46.49 3.18
2013 2108 0.029567 GCCAGTATCTCGTGTCCTCG 59.970 60.000 0.00 0.00 0.00 4.63
2197 2292 4.069232 GGCCCCGCCTTTTCAAGC 62.069 66.667 0.00 0.00 46.69 4.01
2593 2688 1.817099 GCTCAATCCAGGGACAGCG 60.817 63.158 0.00 0.00 0.00 5.18
2596 2691 1.993653 CCAGCTCAATCCAGGGACA 59.006 57.895 0.00 0.00 0.00 4.02
2884 2979 4.156556 GTGCATACCAGAAGCATCTTCAAA 59.843 41.667 8.98 0.00 40.78 2.69
2926 3021 4.038042 CCACTCAGGGGAAAAGAGAAAAAC 59.962 45.833 0.00 0.00 33.69 2.43
3152 3248 7.918562 TGAAAAACGTTTTCCTCTTATTCTTGG 59.081 33.333 25.37 0.00 0.00 3.61
3556 3652 7.308408 CGAACTCTCCATGAAAATGCATGATAT 60.308 37.037 0.00 0.00 46.64 1.63
3596 3692 0.980231 TGCACCAGGTTGCCCTTTTT 60.980 50.000 10.46 0.00 42.25 1.94
3597 3693 0.763986 ATGCACCAGGTTGCCCTTTT 60.764 50.000 10.46 0.00 42.25 2.27
3598 3694 1.152269 ATGCACCAGGTTGCCCTTT 60.152 52.632 10.46 0.00 42.25 3.11
3601 3697 1.304052 TACATGCACCAGGTTGCCC 60.304 57.895 10.46 0.00 42.25 5.36
3603 3699 0.962356 AGCTACATGCACCAGGTTGC 60.962 55.000 8.03 8.03 44.17 4.17
3604 3700 1.089920 GAGCTACATGCACCAGGTTG 58.910 55.000 0.00 0.00 45.94 3.77
3605 3701 3.558674 GAGCTACATGCACCAGGTT 57.441 52.632 0.00 0.00 45.94 3.50
3630 3726 4.785453 CTTCCCTGGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
3631 3727 4.101448 CCTTCCCTGGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
3632 3728 3.732849 CCCTTCCCTGGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
3633 3729 2.204151 ACCCTTCCCTGGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
3634 3730 2.125225 GACCCTTCCCTGGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
3635 3731 3.015753 GGACCCTTCCCTGGACCC 61.016 72.222 0.00 0.00 35.57 4.46
3636 3732 3.400054 CGGACCCTTCCCTGGACC 61.400 72.222 0.00 0.00 38.99 4.46
3637 3733 2.284405 TCGGACCCTTCCCTGGAC 60.284 66.667 0.00 0.00 38.99 4.02
3638 3734 2.284405 GTCGGACCCTTCCCTGGA 60.284 66.667 0.00 0.00 38.99 3.86
3639 3735 3.400054 GGTCGGACCCTTCCCTGG 61.400 72.222 16.55 0.00 38.99 4.45
3640 3736 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
3641 3737 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
3642 3738 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
3643 3739 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
3644 3740 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
3645 3741 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
3646 3742 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
3647 3743 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
3648 3744 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
3649 3745 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
3654 3750 5.216665 TCCTACTATAGACCCAAAGTGGT 57.783 43.478 6.78 0.00 42.79 4.16
3655 3751 6.749036 AATCCTACTATAGACCCAAAGTGG 57.251 41.667 6.78 0.00 37.25 4.00
3656 3752 6.992715 CCAAATCCTACTATAGACCCAAAGTG 59.007 42.308 6.78 0.00 0.00 3.16
3657 3753 6.101296 CCCAAATCCTACTATAGACCCAAAGT 59.899 42.308 6.78 0.00 0.00 2.66
3658 3754 6.465894 CCCCAAATCCTACTATAGACCCAAAG 60.466 46.154 6.78 0.00 0.00 2.77
3659 3755 5.371472 CCCCAAATCCTACTATAGACCCAAA 59.629 44.000 6.78 0.00 0.00 3.28
3660 3756 4.911522 CCCCAAATCCTACTATAGACCCAA 59.088 45.833 6.78 0.00 0.00 4.12
3661 3757 4.077626 ACCCCAAATCCTACTATAGACCCA 60.078 45.833 6.78 0.00 0.00 4.51
3662 3758 4.286291 CACCCCAAATCCTACTATAGACCC 59.714 50.000 6.78 0.00 0.00 4.46
3663 3759 4.906060 ACACCCCAAATCCTACTATAGACC 59.094 45.833 6.78 0.00 0.00 3.85
3664 3760 5.365895 ACACACCCCAAATCCTACTATAGAC 59.634 44.000 6.78 0.00 0.00 2.59
3665 3761 5.535029 ACACACCCCAAATCCTACTATAGA 58.465 41.667 6.78 0.00 0.00 1.98
3666 3762 5.888982 ACACACCCCAAATCCTACTATAG 57.111 43.478 0.00 0.00 0.00 1.31
3667 3763 7.182387 TGTTAACACACCCCAAATCCTACTATA 59.818 37.037 3.59 0.00 0.00 1.31
3714 3810 0.690762 GGTCAGGCAAGAGTAACCCA 59.309 55.000 0.00 0.00 0.00 4.51
3800 3896 4.383552 GCATCTAAGCTGAAGGGAGAAAGA 60.384 45.833 0.00 0.00 0.00 2.52
3807 3903 2.286872 CACTGCATCTAAGCTGAAGGG 58.713 52.381 0.00 0.00 37.23 3.95
3955 4055 2.056815 TTGCACAAGGCCACAAGCA 61.057 52.632 5.01 7.25 46.50 3.91
3957 4057 0.031178 GAGTTGCACAAGGCCACAAG 59.969 55.000 5.01 0.00 40.48 3.16
3958 4058 0.682532 TGAGTTGCACAAGGCCACAA 60.683 50.000 5.01 0.00 40.48 3.33
3959 4059 0.682532 TTGAGTTGCACAAGGCCACA 60.683 50.000 5.01 0.00 40.48 4.17
3960 4060 0.675633 ATTGAGTTGCACAAGGCCAC 59.324 50.000 5.01 0.00 43.89 5.01
3961 4061 2.284754 TATTGAGTTGCACAAGGCCA 57.715 45.000 5.01 0.00 43.89 5.36
3962 4062 2.754552 TCATATTGAGTTGCACAAGGCC 59.245 45.455 0.00 0.00 43.89 5.19
3963 4063 3.441572 AGTCATATTGAGTTGCACAAGGC 59.558 43.478 0.00 0.00 45.13 4.35
3964 4064 6.932356 ATAGTCATATTGAGTTGCACAAGG 57.068 37.500 0.00 0.00 31.49 3.61
4042 4146 9.868277 AAACAACTAATCAACACAATTTTCTCA 57.132 25.926 0.00 0.00 0.00 3.27
4087 4191 2.122768 CCAGAGAAGGACCATTAGGCT 58.877 52.381 0.00 0.00 39.06 4.58
4143 4247 1.069906 GCGTGAAAACTGATTCTGCGT 60.070 47.619 0.00 0.00 33.94 5.24
4301 4406 5.669904 TCTTATCCAATTCCTACCATGACCA 59.330 40.000 0.00 0.00 0.00 4.02
4302 4407 5.998363 GTCTTATCCAATTCCTACCATGACC 59.002 44.000 0.00 0.00 0.00 4.02
4303 4408 6.591935 TGTCTTATCCAATTCCTACCATGAC 58.408 40.000 0.00 0.00 0.00 3.06
4304 4409 6.823286 TGTCTTATCCAATTCCTACCATGA 57.177 37.500 0.00 0.00 0.00 3.07
4333 4443 1.562672 CCTCCGGTGTTCCCCAGAAT 61.563 60.000 0.00 0.00 33.67 2.40
4572 4685 9.658799 TTAATTTGTCAAATGAGGAAAACAACA 57.341 25.926 11.54 0.00 0.00 3.33
4639 4752 1.507141 CCGACTGTGCCCAAACTGTC 61.507 60.000 4.77 4.77 42.43 3.51
4640 4753 1.525995 CCGACTGTGCCCAAACTGT 60.526 57.895 0.00 0.00 35.23 3.55
4641 4754 2.908073 GCCGACTGTGCCCAAACTG 61.908 63.158 0.00 0.00 0.00 3.16
4642 4755 1.764571 TAGCCGACTGTGCCCAAACT 61.765 55.000 0.00 0.00 0.00 2.66
4644 4757 0.392461 GATAGCCGACTGTGCCCAAA 60.392 55.000 0.00 0.00 0.00 3.28
4656 4771 2.802816 GGTCAAAGTAGCATGATAGCCG 59.197 50.000 0.00 0.00 34.23 5.52
4731 4928 7.118680 GGTTGAAAATACACGATCCAGTCTTTA 59.881 37.037 0.00 0.00 0.00 1.85
4740 4939 4.935808 ACCTCTGGTTGAAAATACACGATC 59.064 41.667 0.00 0.00 27.29 3.69
5248 5737 2.774439 ATGGTGCACTTTTGAACGAC 57.226 45.000 17.98 0.00 0.00 4.34
5262 5751 4.052159 TGGTTAGCACAAAACAATGGTG 57.948 40.909 0.00 0.00 35.68 4.17
5320 5809 1.003476 CATGGGCTGGGGTTTTTGC 60.003 57.895 0.00 0.00 0.00 3.68
5405 5895 6.422701 GCACTGTTATTACGTGCCATATAGAA 59.577 38.462 15.86 0.00 43.00 2.10
5482 5974 0.682209 ACTACCTAAAGGCGCGAGGA 60.682 55.000 12.10 0.00 39.32 3.71
5504 5996 2.806608 CTGCACCAAATTTCAGCAGT 57.193 45.000 20.03 0.12 45.57 4.40
5521 6013 4.633126 CACACAGGATAAGTTGATGGTCTG 59.367 45.833 0.00 0.00 0.00 3.51
5573 6065 8.424274 TGTACATGTAAAACAGCAGATATGAG 57.576 34.615 7.25 0.00 0.00 2.90
5720 6214 1.795768 TGCAGTCGTCATCTTTCACC 58.204 50.000 0.00 0.00 0.00 4.02
5798 6314 1.404315 GGAGGGAGAACAAGTGCGTAG 60.404 57.143 0.00 0.00 0.00 3.51
5963 6520 7.415206 GCAAGTACGAAGGATTAACATGGAATT 60.415 37.037 0.00 0.00 0.00 2.17
5964 6521 6.038271 GCAAGTACGAAGGATTAACATGGAAT 59.962 38.462 0.00 0.00 0.00 3.01
5997 6554 3.734463 TGCAAGTACGTGATCCTCAAAA 58.266 40.909 13.30 0.00 0.00 2.44
5998 6555 3.325870 CTGCAAGTACGTGATCCTCAAA 58.674 45.455 13.30 0.00 0.00 2.69
5999 6556 2.353704 CCTGCAAGTACGTGATCCTCAA 60.354 50.000 13.30 0.00 0.00 3.02
6000 6557 1.204704 CCTGCAAGTACGTGATCCTCA 59.795 52.381 13.30 0.00 0.00 3.86
6001 6558 1.927895 CCTGCAAGTACGTGATCCTC 58.072 55.000 13.30 0.00 0.00 3.71
6002 6559 0.108138 GCCTGCAAGTACGTGATCCT 60.108 55.000 13.30 0.00 0.00 3.24
6003 6560 1.421410 CGCCTGCAAGTACGTGATCC 61.421 60.000 13.30 0.00 0.00 3.36
6004 6561 0.736325 ACGCCTGCAAGTACGTGATC 60.736 55.000 13.30 0.00 42.21 2.92
6005 6562 1.292223 ACGCCTGCAAGTACGTGAT 59.708 52.632 13.30 0.00 42.21 3.06
6006 6563 2.732016 ACGCCTGCAAGTACGTGA 59.268 55.556 13.30 0.00 42.21 4.35
6008 6565 3.041940 GCACGCCTGCAAGTACGT 61.042 61.111 2.56 0.00 44.21 3.57
6009 6566 2.738521 AGCACGCCTGCAAGTACG 60.739 61.111 10.37 0.00 46.97 3.67
6010 6567 1.901650 GACAGCACGCCTGCAAGTAC 61.902 60.000 10.37 0.00 46.97 2.73
6011 6568 1.667830 GACAGCACGCCTGCAAGTA 60.668 57.895 10.37 0.00 46.97 2.24
6012 6569 2.974698 GACAGCACGCCTGCAAGT 60.975 61.111 10.37 7.83 46.97 3.16
6013 6570 3.730761 GGACAGCACGCCTGCAAG 61.731 66.667 10.37 4.76 46.97 4.01
6018 6575 4.457496 CATCGGGACAGCACGCCT 62.457 66.667 0.00 0.00 41.75 5.52
6019 6576 2.845752 TTACATCGGGACAGCACGCC 62.846 60.000 0.00 0.00 41.75 5.68
6020 6577 1.017177 TTTACATCGGGACAGCACGC 61.017 55.000 0.00 0.00 41.75 5.34
6021 6578 0.999406 CTTTACATCGGGACAGCACG 59.001 55.000 0.00 0.00 43.89 5.34
6085 6642 9.813446 AAACACTCTTATATTAGTTTACGGAGG 57.187 33.333 0.00 0.00 0.00 4.30
6134 6691 9.517609 CACTCTGTAAACTAATATAAGAGCGTT 57.482 33.333 0.00 0.00 0.00 4.84
6135 6692 8.900781 TCACTCTGTAAACTAATATAAGAGCGT 58.099 33.333 0.00 0.00 0.00 5.07
6136 6693 9.388346 CTCACTCTGTAAACTAATATAAGAGCG 57.612 37.037 0.00 0.00 0.00 5.03
6146 6703 9.971922 GTAAAAGGTACTCACTCTGTAAACTAA 57.028 33.333 0.00 0.00 38.49 2.24
6147 6704 8.292448 CGTAAAAGGTACTCACTCTGTAAACTA 58.708 37.037 0.00 0.00 38.49 2.24
6148 6705 7.144000 CGTAAAAGGTACTCACTCTGTAAACT 58.856 38.462 0.00 0.00 38.49 2.66
6149 6706 6.920210 ACGTAAAAGGTACTCACTCTGTAAAC 59.080 38.462 0.00 0.00 38.49 2.01
6150 6707 7.042797 ACGTAAAAGGTACTCACTCTGTAAA 57.957 36.000 0.00 0.00 38.49 2.01
6151 6708 6.639632 ACGTAAAAGGTACTCACTCTGTAA 57.360 37.500 0.00 0.00 38.49 2.41
6152 6709 6.639632 AACGTAAAAGGTACTCACTCTGTA 57.360 37.500 0.00 0.00 38.49 2.74
6153 6710 5.526506 AACGTAAAAGGTACTCACTCTGT 57.473 39.130 0.00 0.00 38.49 3.41
6154 6711 6.700520 AGAAAACGTAAAAGGTACTCACTCTG 59.299 38.462 0.00 0.00 38.49 3.35
6155 6712 6.700520 CAGAAAACGTAAAAGGTACTCACTCT 59.299 38.462 0.00 0.00 38.49 3.24
6156 6713 6.478016 ACAGAAAACGTAAAAGGTACTCACTC 59.522 38.462 0.00 0.00 38.49 3.51
6157 6714 6.257193 CACAGAAAACGTAAAAGGTACTCACT 59.743 38.462 0.00 0.00 38.49 3.41
6158 6715 6.256321 TCACAGAAAACGTAAAAGGTACTCAC 59.744 38.462 0.00 0.00 38.49 3.51
6159 6716 6.339730 TCACAGAAAACGTAAAAGGTACTCA 58.660 36.000 0.00 0.00 38.49 3.41
6160 6717 6.833342 TCACAGAAAACGTAAAAGGTACTC 57.167 37.500 0.00 0.00 38.49 2.59
6161 6718 7.466805 GTTTCACAGAAAACGTAAAAGGTACT 58.533 34.615 0.00 0.00 31.92 2.73
6162 6719 7.654963 GTTTCACAGAAAACGTAAAAGGTAC 57.345 36.000 0.00 0.00 30.16 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.