Multiple sequence alignment - TraesCS2A01G206000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G206000 chr2A 100.000 6407 0 0 1 6407 184563568 184557162 0.000000e+00 11832.0
1 TraesCS2A01G206000 chr2A 98.170 601 11 0 5805 6405 590185670 590185070 0.000000e+00 1050.0
2 TraesCS2A01G206000 chr2A 79.747 158 18 7 212 360 745121799 745121647 1.140000e-17 102.0
3 TraesCS2A01G206000 chr2B 96.107 1875 63 6 3801 5667 231665894 231664022 0.000000e+00 3049.0
4 TraesCS2A01G206000 chr2B 93.084 1634 73 17 458 2074 231669150 231667540 0.000000e+00 2355.0
5 TraesCS2A01G206000 chr2B 96.159 729 27 1 2655 3382 231666943 231666215 0.000000e+00 1190.0
6 TraesCS2A01G206000 chr2B 96.089 358 13 1 3446 3802 231666216 231665859 3.330000e-162 582.0
7 TraesCS2A01G206000 chr2B 95.906 171 6 1 2248 2418 206593553 206593722 6.330000e-70 276.0
8 TraesCS2A01G206000 chr2B 90.526 190 14 2 2067 2255 231667418 231667232 1.380000e-61 248.0
9 TraesCS2A01G206000 chr2D 96.948 1540 34 7 3801 5332 166107998 166109532 0.000000e+00 2571.0
10 TraesCS2A01G206000 chr2D 96.602 1177 35 3 2631 3802 166106857 166108033 0.000000e+00 1947.0
11 TraesCS2A01G206000 chr2D 96.875 1120 24 4 724 1838 166105234 166106347 0.000000e+00 1864.0
12 TraesCS2A01G206000 chr2D 98.214 392 5 2 5278 5667 166109530 166109921 0.000000e+00 684.0
13 TraesCS2A01G206000 chr2D 80.501 718 85 26 1 699 166102946 166103627 3.450000e-137 499.0
14 TraesCS2A01G206000 chr2D 89.267 382 33 8 1877 2255 166106343 166106719 7.520000e-129 472.0
15 TraesCS2A01G206000 chr2D 97.006 167 5 0 2252 2418 299891717 299891551 1.360000e-71 281.0
16 TraesCS2A01G206000 chr2D 82.635 167 19 6 202 360 614820692 614820528 8.660000e-29 139.0
17 TraesCS2A01G206000 chr1A 98.502 601 9 0 5805 6405 589092871 589093471 0.000000e+00 1061.0
18 TraesCS2A01G206000 chr6A 98.170 601 11 0 5805 6405 79032883 79033483 0.000000e+00 1050.0
19 TraesCS2A01G206000 chr6A 87.805 82 9 1 195 275 593028898 593028817 1.900000e-15 95.3
20 TraesCS2A01G206000 chr4A 97.671 601 14 0 5805 6405 606716444 606715844 0.000000e+00 1033.0
21 TraesCS2A01G206000 chr4A 97.504 601 15 0 5805 6405 341614583 341613983 0.000000e+00 1027.0
22 TraesCS2A01G206000 chr7A 97.504 601 15 0 5805 6405 642387747 642387147 0.000000e+00 1027.0
23 TraesCS2A01G206000 chr7A 97.504 601 14 1 5805 6405 704477313 704476714 0.000000e+00 1026.0
24 TraesCS2A01G206000 chr7A 97.338 601 16 0 5805 6405 237416519 237417119 0.000000e+00 1022.0
25 TraesCS2A01G206000 chr7A 96.386 166 6 0 2254 2419 494786990 494786825 2.280000e-69 274.0
26 TraesCS2A01G206000 chr7A 95.349 43 2 0 2422 2464 663806056 663806014 1.150000e-07 69.4
27 TraesCS2A01G206000 chr5A 97.338 601 16 0 5805 6405 471691204 471690604 0.000000e+00 1022.0
28 TraesCS2A01G206000 chr5A 95.954 173 6 1 2243 2415 320214234 320214405 4.890000e-71 279.0
29 TraesCS2A01G206000 chr3A 98.256 172 2 1 2244 2415 585298151 585297981 3.750000e-77 300.0
30 TraesCS2A01G206000 chr4B 95.906 171 6 1 2248 2418 549841922 549841753 6.330000e-70 276.0
31 TraesCS2A01G206000 chr3B 94.382 178 8 2 2248 2424 604820153 604819977 8.190000e-69 272.0
32 TraesCS2A01G206000 chrUn 95.322 171 7 1 2248 2418 86671483 86671314 2.940000e-68 270.0
33 TraesCS2A01G206000 chr7B 93.048 187 10 3 2237 2421 464547121 464546936 2.940000e-68 270.0
34 TraesCS2A01G206000 chr7B 90.196 51 1 3 2422 2471 633226199 633226152 5.360000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G206000 chr2A 184557162 184563568 6406 True 11832.0 11832 100.000000 1 6407 1 chr2A.!!$R1 6406
1 TraesCS2A01G206000 chr2A 590185070 590185670 600 True 1050.0 1050 98.170000 5805 6405 1 chr2A.!!$R2 600
2 TraesCS2A01G206000 chr2B 231664022 231669150 5128 True 1484.8 3049 94.393000 458 5667 5 chr2B.!!$R1 5209
3 TraesCS2A01G206000 chr2D 166102946 166109921 6975 False 1339.5 2571 93.067833 1 5667 6 chr2D.!!$F1 5666
4 TraesCS2A01G206000 chr1A 589092871 589093471 600 False 1061.0 1061 98.502000 5805 6405 1 chr1A.!!$F1 600
5 TraesCS2A01G206000 chr6A 79032883 79033483 600 False 1050.0 1050 98.170000 5805 6405 1 chr6A.!!$F1 600
6 TraesCS2A01G206000 chr4A 606715844 606716444 600 True 1033.0 1033 97.671000 5805 6405 1 chr4A.!!$R2 600
7 TraesCS2A01G206000 chr4A 341613983 341614583 600 True 1027.0 1027 97.504000 5805 6405 1 chr4A.!!$R1 600
8 TraesCS2A01G206000 chr7A 642387147 642387747 600 True 1027.0 1027 97.504000 5805 6405 1 chr7A.!!$R2 600
9 TraesCS2A01G206000 chr7A 704476714 704477313 599 True 1026.0 1026 97.504000 5805 6405 1 chr7A.!!$R4 600
10 TraesCS2A01G206000 chr7A 237416519 237417119 600 False 1022.0 1022 97.338000 5805 6405 1 chr7A.!!$F1 600
11 TraesCS2A01G206000 chr5A 471690604 471691204 600 True 1022.0 1022 97.338000 5805 6405 1 chr5A.!!$R1 600

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
88 89 0.105039 GGTCAGGATGCCCTAACTCG 59.895 60.000 0.0 0.0 42.02 4.18 F
112 113 0.233848 CGCGTCGTAACCTTTTTGCT 59.766 50.000 0.0 0.0 0.00 3.91 F
114 115 1.662026 GCGTCGTAACCTTTTTGCTGG 60.662 52.381 0.0 0.0 0.00 4.85 F
1975 3599 0.657312 TGTCGTTCTTGCTGCACTTG 59.343 50.000 0.0 0.0 0.00 3.16 F
2157 3908 0.112995 GATGCCCTCCCATAATGCCA 59.887 55.000 0.0 0.0 0.00 4.92 F
3782 5665 0.108585 TCCAAGGGTTGACAGAGCAC 59.891 55.000 0.0 0.0 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1370 2987 0.890683 CCCGCAAATCCTCAGCTTTT 59.109 50.000 0.00 0.0 0.00 2.27 R
1497 3115 1.148310 CGCCACAAGATCGTGACTTT 58.852 50.000 15.90 0.0 39.34 2.66 R
2034 3658 1.264826 CGACAAAACACCCTTAACCCG 59.735 52.381 0.00 0.0 0.00 5.28 R
3486 5368 1.337447 CCCAAGCAATTCAACAGCAGG 60.337 52.381 0.00 0.0 0.00 4.85 R
3797 5680 1.347707 TGTGCTCTGTCAACCCTTAGG 59.652 52.381 0.00 0.0 40.04 2.69 R
5715 7659 0.765510 AGACCCGGCAGAAGTTCTTT 59.234 50.000 1.56 0.0 0.00 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.032960 TGTAGGCAATCTCAATGGTGTT 57.967 40.909 0.00 0.00 0.00 3.32
33 34 3.760684 GGCAATCTCAATGGTGTTCTCTT 59.239 43.478 0.00 0.00 0.00 2.85
38 39 3.056536 TCTCAATGGTGTTCTCTTCTCGG 60.057 47.826 0.00 0.00 0.00 4.63
39 40 1.734465 CAATGGTGTTCTCTTCTCGGC 59.266 52.381 0.00 0.00 0.00 5.54
41 42 1.446272 GGTGTTCTCTTCTCGGCGG 60.446 63.158 7.21 0.00 0.00 6.13
42 43 2.095252 GTGTTCTCTTCTCGGCGGC 61.095 63.158 7.21 0.00 0.00 6.53
47 48 3.916392 CTCTTCTCGGCGGCGTGTT 62.916 63.158 31.06 0.00 0.00 3.32
61 62 2.616001 GGCGTGTTGGTCTTATGGGTAA 60.616 50.000 0.00 0.00 0.00 2.85
67 68 5.046087 GTGTTGGTCTTATGGGTAACTAGGT 60.046 44.000 0.00 0.00 0.00 3.08
69 70 5.687166 TGGTCTTATGGGTAACTAGGTTG 57.313 43.478 0.00 0.00 0.00 3.77
71 72 4.472470 GGTCTTATGGGTAACTAGGTTGGT 59.528 45.833 0.00 0.00 0.00 3.67
73 74 5.188359 GTCTTATGGGTAACTAGGTTGGTCA 59.812 44.000 0.00 0.00 0.00 4.02
80 81 0.912486 ACTAGGTTGGTCAGGATGCC 59.088 55.000 0.00 0.00 34.76 4.40
87 88 1.204146 TGGTCAGGATGCCCTAACTC 58.796 55.000 0.00 0.00 42.02 3.01
88 89 0.105039 GGTCAGGATGCCCTAACTCG 59.895 60.000 0.00 0.00 42.02 4.18
98 99 2.879462 CTAACTCGTGGGCGCGTC 60.879 66.667 8.43 4.38 34.75 5.19
110 111 0.723459 GGCGCGTCGTAACCTTTTTG 60.723 55.000 8.43 0.00 0.00 2.44
111 112 1.325210 GCGCGTCGTAACCTTTTTGC 61.325 55.000 8.43 0.00 0.00 3.68
112 113 0.233848 CGCGTCGTAACCTTTTTGCT 59.766 50.000 0.00 0.00 0.00 3.91
113 114 1.670326 GCGTCGTAACCTTTTTGCTG 58.330 50.000 0.00 0.00 0.00 4.41
114 115 1.662026 GCGTCGTAACCTTTTTGCTGG 60.662 52.381 0.00 0.00 0.00 4.85
119 121 3.949113 TCGTAACCTTTTTGCTGGAGTTT 59.051 39.130 0.00 0.00 0.00 2.66
123 125 6.752815 CGTAACCTTTTTGCTGGAGTTTAAAA 59.247 34.615 0.00 0.00 0.00 1.52
149 151 8.478775 AAATTAACCTAGCAACTCTCCTTTTT 57.521 30.769 0.00 0.00 0.00 1.94
223 225 3.902467 ACTCTCTCCGGTCCTTTTTACTT 59.098 43.478 0.00 0.00 0.00 2.24
225 227 3.899360 TCTCTCCGGTCCTTTTTACTTCA 59.101 43.478 0.00 0.00 0.00 3.02
226 228 4.530946 TCTCTCCGGTCCTTTTTACTTCAT 59.469 41.667 0.00 0.00 0.00 2.57
255 257 9.793259 ATAGGATTTGTCTGAAGTCAAACTTAA 57.207 29.630 5.13 0.00 38.80 1.85
430 440 6.486248 TGAACTCAAACTTCGACAATTCTTG 58.514 36.000 0.00 0.00 0.00 3.02
434 444 5.568482 TCAAACTTCGACAATTCTTGTGTG 58.432 37.500 0.00 0.00 45.52 3.82
435 445 3.609103 ACTTCGACAATTCTTGTGTGC 57.391 42.857 0.00 0.00 45.52 4.57
437 447 3.376859 ACTTCGACAATTCTTGTGTGCAA 59.623 39.130 0.00 0.00 45.52 4.08
445 455 6.498304 ACAATTCTTGTGTGCAAAGTAAGAG 58.502 36.000 0.00 0.00 43.48 2.85
447 457 5.734855 TTCTTGTGTGCAAAGTAAGAGAC 57.265 39.130 0.00 0.00 33.73 3.36
448 458 4.127171 TCTTGTGTGCAAAGTAAGAGACC 58.873 43.478 0.00 0.00 33.73 3.85
449 459 2.846193 TGTGTGCAAAGTAAGAGACCC 58.154 47.619 0.00 0.00 0.00 4.46
450 460 1.798813 GTGTGCAAAGTAAGAGACCCG 59.201 52.381 0.00 0.00 0.00 5.28
453 463 2.673368 GTGCAAAGTAAGAGACCCGATG 59.327 50.000 0.00 0.00 0.00 3.84
497 511 9.567848 TCTGTGTGTTTTGAATTCTTTAGAAAC 57.432 29.630 7.05 9.95 37.61 2.78
594 618 7.060421 CCTTAACCTTGCTATTTTGGGAGATA 58.940 38.462 0.00 0.00 0.00 1.98
595 619 7.013369 CCTTAACCTTGCTATTTTGGGAGATAC 59.987 40.741 0.00 0.00 0.00 2.24
596 620 4.793201 ACCTTGCTATTTTGGGAGATACC 58.207 43.478 0.00 0.00 38.08 2.73
597 621 3.815401 CCTTGCTATTTTGGGAGATACCG 59.185 47.826 0.00 0.00 40.11 4.02
598 622 4.451900 CTTGCTATTTTGGGAGATACCGT 58.548 43.478 0.00 0.00 40.11 4.83
701 2311 2.168936 ACACCACTTCCGTCAGTTACAA 59.831 45.455 0.00 0.00 0.00 2.41
711 2321 2.159841 CGTCAGTTACAATTGAGGCGTG 60.160 50.000 13.59 3.09 0.00 5.34
908 2520 7.054124 GGATCACTTTAGAAGAGAGAGAGAGA 58.946 42.308 0.00 0.00 31.69 3.10
909 2521 7.227512 GGATCACTTTAGAAGAGAGAGAGAGAG 59.772 44.444 0.00 0.00 31.69 3.20
910 2522 6.414732 TCACTTTAGAAGAGAGAGAGAGAGG 58.585 44.000 0.00 0.00 0.00 3.69
911 2523 5.590259 CACTTTAGAAGAGAGAGAGAGAGGG 59.410 48.000 0.00 0.00 0.00 4.30
912 2524 5.491078 ACTTTAGAAGAGAGAGAGAGAGGGA 59.509 44.000 0.00 0.00 0.00 4.20
913 2525 5.630415 TTAGAAGAGAGAGAGAGAGGGAG 57.370 47.826 0.00 0.00 0.00 4.30
914 2526 3.736094 AGAAGAGAGAGAGAGAGGGAGA 58.264 50.000 0.00 0.00 0.00 3.71
1356 2973 4.468153 TCTTGTTTAATTATGGGTTGGGGC 59.532 41.667 0.00 0.00 0.00 5.80
1497 3115 1.899437 GAATCTGTGGGTGGCCGAGA 61.899 60.000 0.00 0.00 0.00 4.04
1517 3135 4.571250 GTCACGATCTTGTGGCGA 57.429 55.556 0.00 0.00 40.31 5.54
1567 3185 2.806434 TGCAGGAGGTAAACCGTAGTA 58.194 47.619 0.00 0.00 42.08 1.82
1578 3196 5.289434 GGTAAACCGTAGTAGAATTTCCGTG 59.711 44.000 0.00 0.00 0.00 4.94
1659 3277 0.733150 GAGCCACGATTTTGGTAGGC 59.267 55.000 0.00 0.00 42.31 3.93
1857 3478 9.772973 AATATCTATATTTGTTGCCGTGAAGTA 57.227 29.630 0.00 0.00 28.99 2.24
1861 3482 2.319136 TTGTTGCCGTGAAGTAGTGT 57.681 45.000 0.00 0.00 0.00 3.55
1862 3483 3.455990 TTGTTGCCGTGAAGTAGTGTA 57.544 42.857 0.00 0.00 0.00 2.90
1865 3486 3.556775 TGTTGCCGTGAAGTAGTGTAAAC 59.443 43.478 0.00 0.00 0.00 2.01
1867 3488 3.386486 TGCCGTGAAGTAGTGTAAACAG 58.614 45.455 0.00 0.00 0.00 3.16
1868 3489 3.068448 TGCCGTGAAGTAGTGTAAACAGA 59.932 43.478 0.00 0.00 0.00 3.41
1869 3490 4.243270 GCCGTGAAGTAGTGTAAACAGAT 58.757 43.478 0.00 0.00 0.00 2.90
1896 3520 5.755409 TCTTTCTCACAGCCATACCTTAA 57.245 39.130 0.00 0.00 0.00 1.85
1901 3525 8.506168 TTTCTCACAGCCATACCTTAAATAAG 57.494 34.615 0.00 0.00 0.00 1.73
1903 3527 7.500992 TCTCACAGCCATACCTTAAATAAGAG 58.499 38.462 1.75 0.00 35.33 2.85
1929 3553 7.556844 ACTGACTCTTCTAGTTGAGTTGAAAA 58.443 34.615 16.92 5.58 42.79 2.29
1953 3577 5.239525 ACTGAAAACTACAGCATTGGAAGTC 59.760 40.000 0.00 0.00 38.74 3.01
1960 3584 3.525537 ACAGCATTGGAAGTCTATGTCG 58.474 45.455 0.00 0.00 32.46 4.35
1975 3599 0.657312 TGTCGTTCTTGCTGCACTTG 59.343 50.000 0.00 0.00 0.00 3.16
2024 3648 2.685380 CTCCAGGGCGAGGGAGTT 60.685 66.667 8.95 0.00 44.59 3.01
2034 3658 1.450025 CGAGGGAGTTTGCCTTTACC 58.550 55.000 0.00 0.00 38.79 2.85
2044 3668 0.328926 TGCCTTTACCGGGTTAAGGG 59.671 55.000 34.04 22.27 41.09 3.95
2053 3677 1.610038 CCGGGTTAAGGGTGTTTTGTC 59.390 52.381 0.00 0.00 0.00 3.18
2099 3850 2.817844 GGAAAGCGGTCAACAAATAGGT 59.182 45.455 0.00 0.00 0.00 3.08
2109 3860 4.035208 GTCAACAAATAGGTAAGCATCCCG 59.965 45.833 0.00 0.00 0.00 5.14
2113 3864 4.141482 ACAAATAGGTAAGCATCCCGTGAT 60.141 41.667 0.00 0.00 0.00 3.06
2157 3908 0.112995 GATGCCCTCCCATAATGCCA 59.887 55.000 0.00 0.00 0.00 4.92
2169 3920 6.857848 TCCCATAATGCCAAATGGACTATTA 58.142 36.000 10.23 5.38 44.62 0.98
2211 3963 8.507249 GGCAAGATATTTGGTATCTACATTGAC 58.493 37.037 0.00 0.00 46.96 3.18
2215 3967 9.261180 AGATATTTGGTATCTACATTGACGTTG 57.739 33.333 0.00 0.00 46.05 4.10
2222 3974 7.389330 TGGTATCTACATTGACGTTGAAATGTT 59.611 33.333 22.22 12.34 42.85 2.71
2227 3979 5.451908 ACATTGACGTTGAAATGTTAGCAG 58.548 37.500 15.41 0.00 42.85 4.24
2228 3980 5.008613 ACATTGACGTTGAAATGTTAGCAGT 59.991 36.000 15.41 0.00 42.85 4.40
2233 3985 5.054477 ACGTTGAAATGTTAGCAGTACTGT 58.946 37.500 23.44 12.90 0.00 3.55
2260 4012 9.884814 AGTCTTCTACATAATTATGTACTCCCT 57.115 33.333 27.12 18.00 44.54 4.20
2262 4014 9.310449 TCTTCTACATAATTATGTACTCCCTCC 57.690 37.037 27.12 0.00 44.54 4.30
2263 4015 7.698506 TCTACATAATTATGTACTCCCTCCG 57.301 40.000 27.12 17.62 44.54 4.63
2264 4016 7.236529 TCTACATAATTATGTACTCCCTCCGT 58.763 38.462 27.12 7.80 44.54 4.69
2265 4017 6.742559 ACATAATTATGTACTCCCTCCGTT 57.257 37.500 26.07 0.54 44.54 4.44
2266 4018 6.756221 ACATAATTATGTACTCCCTCCGTTC 58.244 40.000 26.07 0.00 44.54 3.95
2267 4019 4.684484 AATTATGTACTCCCTCCGTTCC 57.316 45.455 0.00 0.00 0.00 3.62
2268 4020 3.393426 TTATGTACTCCCTCCGTTCCT 57.607 47.619 0.00 0.00 0.00 3.36
2269 4021 4.524802 TTATGTACTCCCTCCGTTCCTA 57.475 45.455 0.00 0.00 0.00 2.94
2270 4022 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
2271 4023 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
2272 4024 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
2273 4025 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
2274 4026 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
2275 4027 6.613699 TGTACTCCCTCCGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
2276 4028 7.068702 TGTACTCCCTCCGTTCCTAAATATAA 58.931 38.462 0.00 0.00 0.00 0.98
2277 4029 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2278 4030 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2279 4031 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2280 4032 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2281 4033 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2282 4034 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2283 4035 7.656542 CCCTCCGTTCCTAAATATAAGTCTTTC 59.343 40.741 0.00 0.00 0.00 2.62
2284 4036 8.422566 CCTCCGTTCCTAAATATAAGTCTTTCT 58.577 37.037 0.00 0.00 0.00 2.52
2301 4053 8.789767 AGTCTTTCTAGAGATTCCAATATGGA 57.210 34.615 0.00 0.00 46.61 3.41
2313 4065 5.977489 TCCAATATGGACTACATACGGAG 57.023 43.478 0.00 0.00 42.67 4.63
2314 4066 4.219944 TCCAATATGGACTACATACGGAGC 59.780 45.833 0.00 0.00 42.67 4.70
2315 4067 4.021456 CCAATATGGACTACATACGGAGCA 60.021 45.833 0.00 0.00 44.41 4.26
2316 4068 5.510690 CCAATATGGACTACATACGGAGCAA 60.511 44.000 0.00 0.00 44.41 3.91
2317 4069 5.801531 ATATGGACTACATACGGAGCAAA 57.198 39.130 0.00 0.00 44.41 3.68
2318 4070 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
2319 4071 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
2320 4072 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
2321 4073 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
2322 4074 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
2323 4075 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2324 4076 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2325 4077 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2326 4078 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2327 4079 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2328 4080 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
2329 4081 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2330 4082 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2331 4083 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2332 4084 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2333 4085 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2375 4127 5.984725 ACATCCGTATGTAGTCCATTTTGA 58.015 37.500 0.00 0.00 44.66 2.69
2376 4128 6.411376 ACATCCGTATGTAGTCCATTTTGAA 58.589 36.000 0.00 0.00 44.66 2.69
2377 4129 6.882140 ACATCCGTATGTAGTCCATTTTGAAA 59.118 34.615 0.00 0.00 44.66 2.69
2378 4130 7.556275 ACATCCGTATGTAGTCCATTTTGAAAT 59.444 33.333 0.00 0.00 44.66 2.17
2379 4131 7.548196 TCCGTATGTAGTCCATTTTGAAATC 57.452 36.000 0.00 0.00 34.86 2.17
2380 4132 7.335627 TCCGTATGTAGTCCATTTTGAAATCT 58.664 34.615 0.00 0.00 34.86 2.40
2381 4133 7.494625 TCCGTATGTAGTCCATTTTGAAATCTC 59.505 37.037 0.00 0.00 34.86 2.75
2382 4134 7.495934 CCGTATGTAGTCCATTTTGAAATCTCT 59.504 37.037 0.00 0.00 34.86 3.10
2383 4135 8.883731 CGTATGTAGTCCATTTTGAAATCTCTT 58.116 33.333 0.00 0.00 34.86 2.85
2409 4161 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
2410 4162 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2411 4163 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2421 4173 5.134725 AGGAACGGAGGGAGTAGTTATTA 57.865 43.478 0.00 0.00 0.00 0.98
2434 4186 4.645588 AGTAGTTATTAGCTCCGCAACTCT 59.354 41.667 0.00 0.00 32.09 3.24
2440 4192 2.125912 CTCCGCAACTCTGACCCG 60.126 66.667 0.00 0.00 0.00 5.28
2464 4216 3.374402 AGTAGGCGCTGCGTGAGT 61.374 61.111 24.04 9.00 0.00 3.41
2465 4217 3.181967 GTAGGCGCTGCGTGAGTG 61.182 66.667 24.04 0.00 35.05 3.51
2466 4218 3.680786 TAGGCGCTGCGTGAGTGT 61.681 61.111 24.04 4.72 34.35 3.55
2467 4219 3.914605 TAGGCGCTGCGTGAGTGTG 62.915 63.158 24.04 0.00 34.35 3.82
2469 4221 4.360027 GCGCTGCGTGAGTGTGTG 62.360 66.667 24.04 0.00 34.35 3.82
2470 4222 2.961721 CGCTGCGTGAGTGTGTGT 60.962 61.111 14.93 0.00 0.00 3.72
2471 4223 2.628106 GCTGCGTGAGTGTGTGTG 59.372 61.111 0.00 0.00 0.00 3.82
2472 4224 2.173669 GCTGCGTGAGTGTGTGTGT 61.174 57.895 0.00 0.00 0.00 3.72
2473 4225 1.637934 CTGCGTGAGTGTGTGTGTG 59.362 57.895 0.00 0.00 0.00 3.82
2474 4226 1.079474 TGCGTGAGTGTGTGTGTGT 60.079 52.632 0.00 0.00 0.00 3.72
2475 4227 1.348250 GCGTGAGTGTGTGTGTGTG 59.652 57.895 0.00 0.00 0.00 3.82
2476 4228 1.358725 GCGTGAGTGTGTGTGTGTGT 61.359 55.000 0.00 0.00 0.00 3.72
2477 4229 1.075542 CGTGAGTGTGTGTGTGTGTT 58.924 50.000 0.00 0.00 0.00 3.32
2478 4230 1.201910 CGTGAGTGTGTGTGTGTGTTG 60.202 52.381 0.00 0.00 0.00 3.33
2479 4231 1.804151 GTGAGTGTGTGTGTGTGTTGT 59.196 47.619 0.00 0.00 0.00 3.32
2480 4232 1.803555 TGAGTGTGTGTGTGTGTTGTG 59.196 47.619 0.00 0.00 0.00 3.33
2481 4233 1.804151 GAGTGTGTGTGTGTGTTGTGT 59.196 47.619 0.00 0.00 0.00 3.72
2549 4302 9.739276 AAGACATAGTTATTCAATTGACAGGAA 57.261 29.630 7.89 0.00 0.00 3.36
2550 4303 9.388506 AGACATAGTTATTCAATTGACAGGAAG 57.611 33.333 7.89 0.00 0.00 3.46
2551 4304 8.511604 ACATAGTTATTCAATTGACAGGAAGG 57.488 34.615 7.89 0.00 0.00 3.46
2552 4305 7.557719 ACATAGTTATTCAATTGACAGGAAGGG 59.442 37.037 7.89 0.00 0.00 3.95
2553 4306 5.892348 AGTTATTCAATTGACAGGAAGGGT 58.108 37.500 7.89 0.00 0.00 4.34
2558 4311 3.077359 CAATTGACAGGAAGGGTCTGAC 58.923 50.000 0.00 0.00 36.26 3.51
2567 4320 4.697352 CAGGAAGGGTCTGACTGTTAAATG 59.303 45.833 7.85 0.00 34.36 2.32
2575 4328 6.166982 GGTCTGACTGTTAAATGACTTAGCT 58.833 40.000 7.85 0.00 0.00 3.32
2576 4329 6.651225 GGTCTGACTGTTAAATGACTTAGCTT 59.349 38.462 7.85 0.00 0.00 3.74
2577 4330 7.173390 GGTCTGACTGTTAAATGACTTAGCTTT 59.827 37.037 7.85 0.00 0.00 3.51
2578 4331 9.204570 GTCTGACTGTTAAATGACTTAGCTTTA 57.795 33.333 0.00 0.00 0.00 1.85
2579 4332 9.424319 TCTGACTGTTAAATGACTTAGCTTTAG 57.576 33.333 0.00 0.00 0.00 1.85
2580 4333 8.029642 TGACTGTTAAATGACTTAGCTTTAGC 57.970 34.615 0.00 0.00 42.49 3.09
2597 4350 7.265693 GCTTTAGCTGTGCTGTTTAATTTAC 57.734 36.000 0.00 0.00 40.10 2.01
2598 4351 7.084486 GCTTTAGCTGTGCTGTTTAATTTACT 58.916 34.615 0.00 0.00 40.10 2.24
2599 4352 7.595130 GCTTTAGCTGTGCTGTTTAATTTACTT 59.405 33.333 0.00 0.00 40.10 2.24
2600 4353 9.463443 CTTTAGCTGTGCTGTTTAATTTACTTT 57.537 29.630 0.00 0.00 40.10 2.66
2601 4354 9.458374 TTTAGCTGTGCTGTTTAATTTACTTTC 57.542 29.630 0.00 0.00 40.10 2.62
2602 4355 6.142817 AGCTGTGCTGTTTAATTTACTTTCG 58.857 36.000 0.00 0.00 37.57 3.46
2603 4356 5.912955 GCTGTGCTGTTTAATTTACTTTCGT 59.087 36.000 0.00 0.00 0.00 3.85
2604 4357 6.086371 GCTGTGCTGTTTAATTTACTTTCGTC 59.914 38.462 0.00 0.00 0.00 4.20
2605 4358 7.254227 TGTGCTGTTTAATTTACTTTCGTCT 57.746 32.000 0.00 0.00 0.00 4.18
2606 4359 7.129622 TGTGCTGTTTAATTTACTTTCGTCTG 58.870 34.615 0.00 0.00 0.00 3.51
2607 4360 7.011576 TGTGCTGTTTAATTTACTTTCGTCTGA 59.988 33.333 0.00 0.00 0.00 3.27
2608 4361 7.853929 GTGCTGTTTAATTTACTTTCGTCTGAA 59.146 33.333 0.00 0.00 0.00 3.02
2609 4362 8.564574 TGCTGTTTAATTTACTTTCGTCTGAAT 58.435 29.630 0.00 0.00 33.20 2.57
2610 4363 8.840867 GCTGTTTAATTTACTTTCGTCTGAATG 58.159 33.333 0.00 0.00 35.84 2.67
2616 4369 8.827177 AATTTACTTTCGTCTGAATGAGTACA 57.173 30.769 0.00 0.00 30.75 2.90
2617 4370 7.869016 TTTACTTTCGTCTGAATGAGTACAG 57.131 36.000 0.00 0.00 30.75 2.74
2618 4371 5.707242 ACTTTCGTCTGAATGAGTACAGA 57.293 39.130 0.00 0.00 40.22 3.41
2619 4372 6.085555 ACTTTCGTCTGAATGAGTACAGAA 57.914 37.500 0.00 0.00 43.29 3.02
2620 4373 5.921408 ACTTTCGTCTGAATGAGTACAGAAC 59.079 40.000 0.00 0.00 43.29 3.01
2621 4374 5.447624 TTCGTCTGAATGAGTACAGAACA 57.552 39.130 0.00 0.00 43.29 3.18
2622 4375 5.644977 TCGTCTGAATGAGTACAGAACAT 57.355 39.130 0.00 0.00 43.29 2.71
2623 4376 5.641709 TCGTCTGAATGAGTACAGAACATC 58.358 41.667 0.00 0.00 43.29 3.06
2624 4377 5.183140 TCGTCTGAATGAGTACAGAACATCA 59.817 40.000 0.00 0.00 43.29 3.07
2625 4378 6.038985 CGTCTGAATGAGTACAGAACATCAT 58.961 40.000 0.00 0.00 43.29 2.45
2626 4379 6.020041 CGTCTGAATGAGTACAGAACATCATG 60.020 42.308 0.00 0.00 43.29 3.07
2627 4380 7.038048 GTCTGAATGAGTACAGAACATCATGA 58.962 38.462 0.00 0.00 43.29 3.07
2628 4381 7.009999 GTCTGAATGAGTACAGAACATCATGAC 59.990 40.741 0.00 0.00 43.29 3.06
2629 4382 6.700352 TGAATGAGTACAGAACATCATGACA 58.300 36.000 0.00 0.00 32.85 3.58
2651 4404 1.133025 GTGGACATGTGGTTAGCATGC 59.867 52.381 10.51 10.51 45.40 4.06
2696 4577 8.225603 TCAAGAAATAGACTTCAGTTTTGCTT 57.774 30.769 0.00 0.00 0.00 3.91
2712 4593 6.811665 AGTTTTGCTTGGTTTTTCTCTTACAC 59.188 34.615 0.00 0.00 0.00 2.90
2758 4639 2.371658 AAGTCTTCTGGCTTGCCTTT 57.628 45.000 13.18 0.00 0.00 3.11
2842 4723 6.816640 TCACATGTAGCATTCAAGGTTAGTAC 59.183 38.462 0.00 0.00 0.00 2.73
2872 4753 2.167075 GCTTTGCAGCTTATCCAATGGT 59.833 45.455 0.00 0.00 43.51 3.55
2882 4763 4.019321 GCTTATCCAATGGTAGATGGGCTA 60.019 45.833 0.00 0.00 37.31 3.93
2891 4772 3.953612 TGGTAGATGGGCTAAATTTGCAG 59.046 43.478 0.00 0.00 0.00 4.41
2908 4789 3.338249 TGCAGTTAAAGATCCAGTGCTC 58.662 45.455 11.04 0.00 37.68 4.26
2920 4801 3.674997 TCCAGTGCTCAACAATAACTCC 58.325 45.455 0.00 0.00 0.00 3.85
2924 4805 3.498397 AGTGCTCAACAATAACTCCGTTG 59.502 43.478 0.00 0.00 41.07 4.10
3059 4940 7.612244 AGACTATCATAGCGACTGGTAATGTAT 59.388 37.037 0.00 0.00 0.00 2.29
3075 4956 6.772716 GGTAATGTATTGGTCACATTGGATCT 59.227 38.462 10.20 0.00 44.30 2.75
3431 5313 1.881973 TGTGCTTCTGATGCTCCAAAC 59.118 47.619 15.38 6.56 0.00 2.93
3432 5314 1.200948 GTGCTTCTGATGCTCCAAACC 59.799 52.381 15.38 0.00 0.00 3.27
3467 5349 1.482177 CCTGAGACATAGAGGGGAGGG 60.482 61.905 0.00 0.00 0.00 4.30
3472 5354 2.254023 AGACATAGAGGGGAGGGGATTT 59.746 50.000 0.00 0.00 0.00 2.17
3486 5368 5.453480 GGAGGGGATTTATGTCAGTGTACTC 60.453 48.000 0.00 0.00 0.00 2.59
3490 5372 4.811557 GGATTTATGTCAGTGTACTCCTGC 59.188 45.833 7.90 5.08 0.00 4.85
3517 5399 3.673599 GCTTGGGTGGAAGCTCAC 58.326 61.111 0.00 0.00 44.26 3.51
3522 5405 2.452600 TGGGTGGAAGCTCACTTTTT 57.547 45.000 5.61 0.00 35.82 1.94
3529 5412 5.652452 GGTGGAAGCTCACTTTTTACCATAT 59.348 40.000 5.61 0.00 35.82 1.78
3639 5522 2.161855 TCCTAACACCAGCTGCAATTG 58.838 47.619 8.66 0.00 0.00 2.32
3709 5592 8.573885 TCACCACTCTACCATTAGTTTATATCG 58.426 37.037 0.00 0.00 0.00 2.92
3766 5649 0.118346 TCTTGCCCCCTAACTCTCCA 59.882 55.000 0.00 0.00 0.00 3.86
3767 5650 0.991920 CTTGCCCCCTAACTCTCCAA 59.008 55.000 0.00 0.00 0.00 3.53
3768 5651 0.991920 TTGCCCCCTAACTCTCCAAG 59.008 55.000 0.00 0.00 0.00 3.61
3769 5652 0.914417 TGCCCCCTAACTCTCCAAGG 60.914 60.000 0.00 0.00 0.00 3.61
3773 5656 2.789409 CCCTAACTCTCCAAGGGTTG 57.211 55.000 2.47 0.00 44.34 3.77
3774 5657 2.266279 CCCTAACTCTCCAAGGGTTGA 58.734 52.381 2.47 0.00 44.34 3.18
3775 5658 2.027100 CCCTAACTCTCCAAGGGTTGAC 60.027 54.545 2.47 0.00 44.34 3.18
3776 5659 2.637872 CCTAACTCTCCAAGGGTTGACA 59.362 50.000 2.47 0.00 0.00 3.58
3777 5660 2.938956 AACTCTCCAAGGGTTGACAG 57.061 50.000 0.00 0.00 0.00 3.51
3778 5661 2.103153 ACTCTCCAAGGGTTGACAGA 57.897 50.000 0.00 0.00 0.00 3.41
3779 5662 1.974236 ACTCTCCAAGGGTTGACAGAG 59.026 52.381 11.30 11.30 40.50 3.35
3780 5663 0.687354 TCTCCAAGGGTTGACAGAGC 59.313 55.000 0.00 0.00 0.00 4.09
3781 5664 0.397941 CTCCAAGGGTTGACAGAGCA 59.602 55.000 0.00 0.00 0.00 4.26
3782 5665 0.108585 TCCAAGGGTTGACAGAGCAC 59.891 55.000 0.00 0.00 0.00 4.40
3783 5666 0.179020 CCAAGGGTTGACAGAGCACA 60.179 55.000 0.00 0.00 0.00 4.57
3784 5667 1.679139 CAAGGGTTGACAGAGCACAA 58.321 50.000 0.00 0.00 0.00 3.33
3785 5668 2.023673 CAAGGGTTGACAGAGCACAAA 58.976 47.619 0.00 0.00 0.00 2.83
3786 5669 2.624838 CAAGGGTTGACAGAGCACAAAT 59.375 45.455 0.00 0.00 0.00 2.32
3787 5670 2.508526 AGGGTTGACAGAGCACAAATC 58.491 47.619 0.00 0.00 0.00 2.17
3788 5671 2.158623 AGGGTTGACAGAGCACAAATCA 60.159 45.455 0.00 0.00 0.00 2.57
3789 5672 2.622942 GGGTTGACAGAGCACAAATCAA 59.377 45.455 0.00 0.00 0.00 2.57
3790 5673 3.550842 GGGTTGACAGAGCACAAATCAAC 60.551 47.826 13.17 13.17 45.40 3.18
3791 5674 3.316308 GGTTGACAGAGCACAAATCAACT 59.684 43.478 17.81 0.00 45.43 3.16
3792 5675 4.531332 GTTGACAGAGCACAAATCAACTC 58.469 43.478 13.86 0.00 43.68 3.01
3793 5676 4.077300 TGACAGAGCACAAATCAACTCT 57.923 40.909 0.00 0.00 40.07 3.24
3797 5680 3.406764 AGAGCACAAATCAACTCTGACC 58.593 45.455 0.00 0.00 38.07 4.02
3798 5681 2.485814 GAGCACAAATCAACTCTGACCC 59.514 50.000 0.00 0.00 33.30 4.46
3799 5682 2.107204 AGCACAAATCAACTCTGACCCT 59.893 45.455 0.00 0.00 33.30 4.34
3839 5722 1.553706 TCAACTCCGACCCTAACTCC 58.446 55.000 0.00 0.00 0.00 3.85
3840 5723 1.076677 TCAACTCCGACCCTAACTCCT 59.923 52.381 0.00 0.00 0.00 3.69
3891 5776 3.930336 TCTTCTGCTGTTGTCATACTGG 58.070 45.455 0.00 0.00 0.00 4.00
3949 5834 6.554605 AGGAGAAAAGTTCATTCCCATTTGAA 59.445 34.615 0.00 0.00 0.00 2.69
3983 5868 6.370442 ACGATTTTTATCAACGGAGACAATCA 59.630 34.615 0.00 0.00 0.00 2.57
3995 5880 3.486383 GAGACAATCAAAGGGTCAACCA 58.514 45.455 0.89 0.00 43.89 3.67
4195 6080 2.936498 CCATTAACTACGGCAGAACTGG 59.064 50.000 3.99 0.00 0.00 4.00
4209 6094 1.135333 GAACTGGTCCTAGAGAAGCGG 59.865 57.143 0.00 0.00 0.00 5.52
4221 6106 1.448717 GAAGCGGCTTGACCTCTCC 60.449 63.158 21.70 0.00 29.90 3.71
4331 6216 8.911247 AGTGAAGAACAAACTGACAAATTTAC 57.089 30.769 0.00 0.00 0.00 2.01
4513 6398 2.028930 CACTTACAAGAGGAGGCGTCTT 60.029 50.000 6.34 0.00 38.82 3.01
4652 6537 6.010219 TGAGTTAAAATTCTTTCCTGAGGGG 58.990 40.000 0.00 0.00 0.00 4.79
4653 6538 5.333581 AGTTAAAATTCTTTCCTGAGGGGG 58.666 41.667 0.00 0.00 35.33 5.40
4786 6671 1.494960 TTTTGCCCTGGTCTGCTTTT 58.505 45.000 0.00 0.00 0.00 2.27
4890 6776 6.887626 GGTTCAAACCTTACCTTCATAACA 57.112 37.500 4.63 0.00 45.75 2.41
4935 6824 1.281419 TCCCTGCCGTTAAGGATGAA 58.719 50.000 0.00 0.00 45.00 2.57
5089 6978 5.246981 ACTTTCTTCCATGGACAGAATCA 57.753 39.130 26.33 17.65 0.00 2.57
5163 7054 0.532573 CTCAGTTAGCCGAGGCAGAA 59.467 55.000 17.18 7.11 44.88 3.02
5256 7147 9.671279 GTCATTGATGAATGGGTATGTATATCA 57.329 33.333 5.00 0.00 39.68 2.15
5332 7275 4.039245 TCCAGTGCTAAAATCTATCCTCCG 59.961 45.833 0.00 0.00 0.00 4.63
5561 7504 3.982576 AGCTAACCTTTGGTTGTTTCG 57.017 42.857 11.78 0.00 46.35 3.46
5664 7608 1.607628 GAGCTGCCTTGCTTATGATGG 59.392 52.381 0.00 0.00 44.17 3.51
5665 7609 1.064166 AGCTGCCTTGCTTATGATGGT 60.064 47.619 0.00 0.00 40.93 3.55
5668 7612 3.736126 GCTGCCTTGCTTATGATGGTTTC 60.736 47.826 0.00 0.00 0.00 2.78
5669 7613 3.698040 CTGCCTTGCTTATGATGGTTTCT 59.302 43.478 0.00 0.00 0.00 2.52
5670 7614 4.088634 TGCCTTGCTTATGATGGTTTCTT 58.911 39.130 0.00 0.00 0.00 2.52
5671 7615 5.260424 TGCCTTGCTTATGATGGTTTCTTA 58.740 37.500 0.00 0.00 0.00 2.10
5672 7616 5.714333 TGCCTTGCTTATGATGGTTTCTTAA 59.286 36.000 0.00 0.00 0.00 1.85
5673 7617 6.380846 TGCCTTGCTTATGATGGTTTCTTAAT 59.619 34.615 0.00 0.00 0.00 1.40
5674 7618 6.698766 GCCTTGCTTATGATGGTTTCTTAATG 59.301 38.462 0.00 0.00 0.00 1.90
5675 7619 7.416664 GCCTTGCTTATGATGGTTTCTTAATGA 60.417 37.037 0.00 0.00 0.00 2.57
5676 7620 8.636213 CCTTGCTTATGATGGTTTCTTAATGAT 58.364 33.333 0.00 0.00 0.00 2.45
5677 7621 9.459640 CTTGCTTATGATGGTTTCTTAATGATG 57.540 33.333 0.00 0.00 0.00 3.07
5678 7622 8.523915 TGCTTATGATGGTTTCTTAATGATGT 57.476 30.769 0.00 0.00 0.00 3.06
5679 7623 8.407832 TGCTTATGATGGTTTCTTAATGATGTG 58.592 33.333 0.00 0.00 0.00 3.21
5680 7624 8.408601 GCTTATGATGGTTTCTTAATGATGTGT 58.591 33.333 0.00 0.00 0.00 3.72
5709 7653 3.988379 TTTGTCGATTCTTTTGCTGCT 57.012 38.095 0.00 0.00 0.00 4.24
5710 7654 3.988379 TTGTCGATTCTTTTGCTGCTT 57.012 38.095 0.00 0.00 0.00 3.91
5711 7655 3.542712 TGTCGATTCTTTTGCTGCTTC 57.457 42.857 0.00 0.00 0.00 3.86
5712 7656 2.877786 TGTCGATTCTTTTGCTGCTTCA 59.122 40.909 0.00 0.00 0.00 3.02
5713 7657 3.229552 GTCGATTCTTTTGCTGCTTCAC 58.770 45.455 0.00 0.00 0.00 3.18
5714 7658 2.877786 TCGATTCTTTTGCTGCTTCACA 59.122 40.909 0.00 0.00 0.00 3.58
5715 7659 3.314913 TCGATTCTTTTGCTGCTTCACAA 59.685 39.130 0.00 0.00 0.00 3.33
5716 7660 4.043750 CGATTCTTTTGCTGCTTCACAAA 58.956 39.130 0.00 0.00 34.11 2.83
5717 7661 4.503734 CGATTCTTTTGCTGCTTCACAAAA 59.496 37.500 0.00 0.00 41.97 2.44
5722 7666 4.454728 TTTGCTGCTTCACAAAAGAACT 57.545 36.364 0.00 0.00 33.06 3.01
5723 7667 4.454728 TTGCTGCTTCACAAAAGAACTT 57.545 36.364 0.00 0.00 0.00 2.66
5724 7668 4.032703 TGCTGCTTCACAAAAGAACTTC 57.967 40.909 0.00 0.00 0.00 3.01
5725 7669 3.696051 TGCTGCTTCACAAAAGAACTTCT 59.304 39.130 0.00 0.00 0.00 2.85
5726 7670 4.040376 GCTGCTTCACAAAAGAACTTCTG 58.960 43.478 0.00 0.00 0.00 3.02
5727 7671 4.032703 TGCTTCACAAAAGAACTTCTGC 57.967 40.909 0.00 0.00 0.00 4.26
5728 7672 3.181487 TGCTTCACAAAAGAACTTCTGCC 60.181 43.478 0.00 0.00 0.00 4.85
5729 7673 3.621794 CTTCACAAAAGAACTTCTGCCG 58.378 45.455 0.00 0.00 0.00 5.69
5730 7674 1.946768 TCACAAAAGAACTTCTGCCGG 59.053 47.619 0.00 0.00 0.00 6.13
5731 7675 1.001378 CACAAAAGAACTTCTGCCGGG 60.001 52.381 2.18 0.00 0.00 5.73
5732 7676 1.318576 CAAAAGAACTTCTGCCGGGT 58.681 50.000 2.18 0.00 0.00 5.28
5733 7677 1.266989 CAAAAGAACTTCTGCCGGGTC 59.733 52.381 2.18 0.00 0.00 4.46
5734 7678 0.765510 AAAGAACTTCTGCCGGGTCT 59.234 50.000 2.18 0.00 0.00 3.85
5735 7679 0.765510 AAGAACTTCTGCCGGGTCTT 59.234 50.000 2.18 0.00 0.00 3.01
5736 7680 0.765510 AGAACTTCTGCCGGGTCTTT 59.234 50.000 2.18 0.00 0.00 2.52
5737 7681 1.143073 AGAACTTCTGCCGGGTCTTTT 59.857 47.619 2.18 0.00 0.00 2.27
5738 7682 2.370849 AGAACTTCTGCCGGGTCTTTTA 59.629 45.455 2.18 0.00 0.00 1.52
5739 7683 2.180432 ACTTCTGCCGGGTCTTTTAC 57.820 50.000 2.18 0.00 0.00 2.01
5740 7684 1.418637 ACTTCTGCCGGGTCTTTTACA 59.581 47.619 2.18 0.00 0.00 2.41
5741 7685 1.804748 CTTCTGCCGGGTCTTTTACAC 59.195 52.381 2.18 0.00 0.00 2.90
5742 7686 1.053424 TCTGCCGGGTCTTTTACACT 58.947 50.000 2.18 0.00 0.00 3.55
5743 7687 2.250031 TCTGCCGGGTCTTTTACACTA 58.750 47.619 2.18 0.00 0.00 2.74
5744 7688 2.028748 TCTGCCGGGTCTTTTACACTAC 60.029 50.000 2.18 0.00 0.00 2.73
5745 7689 1.002315 TGCCGGGTCTTTTACACTACC 59.998 52.381 2.18 0.00 0.00 3.18
5746 7690 1.277273 GCCGGGTCTTTTACACTACCT 59.723 52.381 2.18 0.00 32.38 3.08
5747 7691 2.497273 GCCGGGTCTTTTACACTACCTA 59.503 50.000 2.18 0.00 32.38 3.08
5748 7692 3.133542 GCCGGGTCTTTTACACTACCTAT 59.866 47.826 2.18 0.00 32.38 2.57
5749 7693 4.690122 CCGGGTCTTTTACACTACCTATG 58.310 47.826 0.00 0.00 32.38 2.23
5750 7694 4.161001 CCGGGTCTTTTACACTACCTATGT 59.839 45.833 0.00 0.00 32.38 2.29
5751 7695 5.346522 CGGGTCTTTTACACTACCTATGTC 58.653 45.833 0.00 0.00 32.38 3.06
5752 7696 5.126707 CGGGTCTTTTACACTACCTATGTCT 59.873 44.000 0.00 0.00 32.38 3.41
5753 7697 6.350780 CGGGTCTTTTACACTACCTATGTCTT 60.351 42.308 0.00 0.00 32.38 3.01
5754 7698 7.392418 GGGTCTTTTACACTACCTATGTCTTT 58.608 38.462 0.00 0.00 32.38 2.52
5755 7699 8.534496 GGGTCTTTTACACTACCTATGTCTTTA 58.466 37.037 0.00 0.00 32.38 1.85
5782 7726 7.952671 ACTTGATATTTAGATCGGCTAGAACA 58.047 34.615 0.00 0.00 0.00 3.18
5783 7727 8.589338 ACTTGATATTTAGATCGGCTAGAACAT 58.411 33.333 0.00 0.00 0.00 2.71
5784 7728 9.429359 CTTGATATTTAGATCGGCTAGAACATT 57.571 33.333 0.00 0.00 0.00 2.71
5785 7729 9.778741 TTGATATTTAGATCGGCTAGAACATTT 57.221 29.630 0.00 0.00 0.00 2.32
5786 7730 9.424319 TGATATTTAGATCGGCTAGAACATTTC 57.576 33.333 0.00 0.00 0.00 2.17
5787 7731 9.424319 GATATTTAGATCGGCTAGAACATTTCA 57.576 33.333 0.00 0.00 0.00 2.69
5788 7732 6.903883 TTTAGATCGGCTAGAACATTTCAC 57.096 37.500 0.00 0.00 0.00 3.18
5789 7733 4.471904 AGATCGGCTAGAACATTTCACA 57.528 40.909 0.00 0.00 0.00 3.58
5790 7734 4.832248 AGATCGGCTAGAACATTTCACAA 58.168 39.130 0.00 0.00 0.00 3.33
5791 7735 5.245531 AGATCGGCTAGAACATTTCACAAA 58.754 37.500 0.00 0.00 0.00 2.83
5792 7736 5.705441 AGATCGGCTAGAACATTTCACAAAA 59.295 36.000 0.00 0.00 0.00 2.44
5793 7737 5.356882 TCGGCTAGAACATTTCACAAAAG 57.643 39.130 0.00 0.00 0.00 2.27
5794 7738 5.060506 TCGGCTAGAACATTTCACAAAAGA 58.939 37.500 0.00 0.00 0.00 2.52
5795 7739 5.705441 TCGGCTAGAACATTTCACAAAAGAT 59.295 36.000 0.00 0.00 0.00 2.40
5796 7740 6.024049 CGGCTAGAACATTTCACAAAAGATC 58.976 40.000 0.00 0.00 0.00 2.75
5797 7741 6.024049 GGCTAGAACATTTCACAAAAGATCG 58.976 40.000 0.00 0.00 0.00 3.69
5798 7742 6.348540 GGCTAGAACATTTCACAAAAGATCGT 60.349 38.462 0.00 0.00 0.00 3.73
5799 7743 6.738649 GCTAGAACATTTCACAAAAGATCGTC 59.261 38.462 0.00 0.00 0.00 4.20
5800 7744 6.867662 AGAACATTTCACAAAAGATCGTCT 57.132 33.333 0.00 0.00 0.00 4.18
5801 7745 7.962964 AGAACATTTCACAAAAGATCGTCTA 57.037 32.000 0.00 0.00 0.00 2.59
5802 7746 8.023050 AGAACATTTCACAAAAGATCGTCTAG 57.977 34.615 0.00 0.00 0.00 2.43
5803 7747 7.872993 AGAACATTTCACAAAAGATCGTCTAGA 59.127 33.333 0.00 0.00 0.00 2.43
5855 7799 4.215109 TCTTCAGGCTAAAACTTTGGCTT 58.785 39.130 9.92 0.32 43.23 4.35
5883 7827 2.351244 TGCGCCCGACTGATTCTCT 61.351 57.895 4.18 0.00 0.00 3.10
5902 7846 4.827284 TCTCTGTTTTGGAAAGGGTTGATC 59.173 41.667 0.00 0.00 0.00 2.92
5972 7916 0.606604 GGCTAACACGAGGTTCTGGA 59.393 55.000 0.00 0.00 40.96 3.86
6068 8012 4.848357 AGCCTATGTTGCAACTGTCTTAT 58.152 39.130 28.61 15.66 0.00 1.73
6157 8101 3.921677 TCTTGTACGAAGGTTGATGGAC 58.078 45.455 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.225942 AGAGAACACCATTGAGATTGCCTA 59.774 41.667 0.00 0.00 0.00 3.93
16 17 3.056536 CCGAGAAGAGAACACCATTGAGA 60.057 47.826 0.00 0.00 0.00 3.27
20 21 1.673033 CGCCGAGAAGAGAACACCATT 60.673 52.381 0.00 0.00 0.00 3.16
28 29 4.116328 CACGCCGCCGAGAAGAGA 62.116 66.667 0.00 0.00 38.29 3.10
38 39 1.423845 CATAAGACCAACACGCCGC 59.576 57.895 0.00 0.00 0.00 6.53
39 40 1.366111 CCCATAAGACCAACACGCCG 61.366 60.000 0.00 0.00 0.00 6.46
41 42 2.389962 TACCCATAAGACCAACACGC 57.610 50.000 0.00 0.00 0.00 5.34
42 43 3.934068 AGTTACCCATAAGACCAACACG 58.066 45.455 0.00 0.00 0.00 4.49
47 48 4.472108 CCAACCTAGTTACCCATAAGACCA 59.528 45.833 0.00 0.00 0.00 4.02
51 52 5.396436 CCTGACCAACCTAGTTACCCATAAG 60.396 48.000 0.00 0.00 0.00 1.73
61 62 0.912486 GGCATCCTGACCAACCTAGT 59.088 55.000 0.00 0.00 0.00 2.57
71 72 0.824109 CACGAGTTAGGGCATCCTGA 59.176 55.000 0.00 0.00 44.61 3.86
73 74 1.338136 CCCACGAGTTAGGGCATCCT 61.338 60.000 0.00 0.00 46.96 3.24
88 89 4.729856 AGGTTACGACGCGCCCAC 62.730 66.667 5.73 0.00 0.00 4.61
95 96 1.868498 TCCAGCAAAAAGGTTACGACG 59.132 47.619 0.00 0.00 0.00 5.12
98 99 3.982576 AACTCCAGCAAAAAGGTTACG 57.017 42.857 0.00 0.00 0.00 3.18
123 125 8.478775 AAAAGGAGAGTTGCTAGGTTAATTTT 57.521 30.769 0.00 0.00 0.00 1.82
149 151 5.957842 ACCATGAGCTTCGTTTCATTAAA 57.042 34.783 0.00 0.00 31.91 1.52
150 152 5.935206 TGTACCATGAGCTTCGTTTCATTAA 59.065 36.000 0.00 0.00 31.91 1.40
151 153 5.350365 GTGTACCATGAGCTTCGTTTCATTA 59.650 40.000 0.00 0.00 31.91 1.90
152 154 4.154195 GTGTACCATGAGCTTCGTTTCATT 59.846 41.667 0.00 0.00 31.91 2.57
153 155 3.684788 GTGTACCATGAGCTTCGTTTCAT 59.315 43.478 0.00 0.00 34.48 2.57
154 156 3.064207 GTGTACCATGAGCTTCGTTTCA 58.936 45.455 0.00 0.00 0.00 2.69
155 157 2.415512 GGTGTACCATGAGCTTCGTTTC 59.584 50.000 0.00 0.00 35.64 2.78
156 158 2.224426 TGGTGTACCATGAGCTTCGTTT 60.224 45.455 0.00 0.00 42.01 3.60
157 159 1.346395 TGGTGTACCATGAGCTTCGTT 59.654 47.619 0.00 0.00 42.01 3.85
158 160 0.973632 TGGTGTACCATGAGCTTCGT 59.026 50.000 0.00 0.00 42.01 3.85
159 161 3.832704 TGGTGTACCATGAGCTTCG 57.167 52.632 0.00 0.00 42.01 3.79
188 190 7.274603 ACCGGAGAGAGTATTATGTTTAGAC 57.725 40.000 9.46 0.00 0.00 2.59
194 196 4.456662 AGGACCGGAGAGAGTATTATGT 57.543 45.455 9.46 0.00 0.00 2.29
199 201 5.270794 AGTAAAAAGGACCGGAGAGAGTAT 58.729 41.667 9.46 0.00 0.00 2.12
205 207 4.903045 ATGAAGTAAAAAGGACCGGAGA 57.097 40.909 9.46 0.00 0.00 3.71
403 413 7.535139 AGAATTGTCGAAGTTTGAGTTCAAAA 58.465 30.769 8.74 0.00 46.08 2.44
404 414 7.083875 AGAATTGTCGAAGTTTGAGTTCAAA 57.916 32.000 3.28 3.28 42.90 2.69
405 415 6.677781 AGAATTGTCGAAGTTTGAGTTCAA 57.322 33.333 12.13 6.42 0.00 2.69
407 417 6.959701 CAAGAATTGTCGAAGTTTGAGTTC 57.040 37.500 0.00 0.00 42.34 3.01
430 440 1.798813 CGGGTCTCTTACTTTGCACAC 59.201 52.381 0.00 0.00 0.00 3.82
434 444 2.280628 CCATCGGGTCTCTTACTTTGC 58.719 52.381 0.00 0.00 0.00 3.68
447 457 3.132289 ACACATGACTAAGTACCATCGGG 59.868 47.826 0.00 0.00 41.29 5.14
448 458 4.098044 AGACACATGACTAAGTACCATCGG 59.902 45.833 0.00 0.00 0.00 4.18
449 459 5.066634 AGAGACACATGACTAAGTACCATCG 59.933 44.000 0.00 0.00 0.00 3.84
450 460 6.127591 ACAGAGACACATGACTAAGTACCATC 60.128 42.308 0.00 0.00 0.00 3.51
453 463 5.047943 ACACAGAGACACATGACTAAGTACC 60.048 44.000 0.00 0.00 0.00 3.34
497 511 4.320690 CGCAACATTAATTCACTGTTTCCG 59.679 41.667 0.00 0.00 30.99 4.30
535 559 3.181483 CGGTTGCGGTAACTATTAGGAGT 60.181 47.826 8.82 0.00 39.31 3.85
537 561 2.101249 CCGGTTGCGGTAACTATTAGGA 59.899 50.000 8.82 0.00 39.31 2.94
538 562 2.476821 CCGGTTGCGGTAACTATTAGG 58.523 52.381 8.82 2.30 39.31 2.69
539 563 1.862827 GCCGGTTGCGGTAACTATTAG 59.137 52.381 1.90 0.00 39.31 1.73
540 564 1.206610 TGCCGGTTGCGGTAACTATTA 59.793 47.619 1.90 0.00 45.60 0.98
541 565 0.036199 TGCCGGTTGCGGTAACTATT 60.036 50.000 1.90 0.00 45.60 1.73
542 566 0.741927 GTGCCGGTTGCGGTAACTAT 60.742 55.000 1.90 0.00 45.60 2.12
543 567 1.374505 GTGCCGGTTGCGGTAACTA 60.375 57.895 1.90 0.00 45.60 2.24
544 568 2.667199 GTGCCGGTTGCGGTAACT 60.667 61.111 1.90 0.00 45.60 2.24
545 569 3.729698 GGTGCCGGTTGCGGTAAC 61.730 66.667 1.90 0.00 45.60 2.50
561 585 2.723273 AGCAAGGTTAAGGGAAATCGG 58.277 47.619 0.00 0.00 0.00 4.18
563 587 7.041721 CCAAAATAGCAAGGTTAAGGGAAATC 58.958 38.462 0.00 0.00 0.00 2.17
594 618 9.591792 GGTAAGACTTTAATCAACTAATACGGT 57.408 33.333 0.00 0.00 0.00 4.83
595 619 8.749499 CGGTAAGACTTTAATCAACTAATACGG 58.251 37.037 0.00 0.00 0.00 4.02
596 620 8.264632 GCGGTAAGACTTTAATCAACTAATACG 58.735 37.037 0.00 0.00 0.00 3.06
597 621 9.090692 TGCGGTAAGACTTTAATCAACTAATAC 57.909 33.333 0.00 0.00 0.00 1.89
598 622 9.656040 TTGCGGTAAGACTTTAATCAACTAATA 57.344 29.630 0.00 0.00 0.00 0.98
908 2520 2.788589 GGTTCTCCCCCTCTCCCT 59.211 66.667 0.00 0.00 0.00 4.20
909 2521 2.764547 CGGTTCTCCCCCTCTCCC 60.765 72.222 0.00 0.00 0.00 4.30
910 2522 1.305887 TTCGGTTCTCCCCCTCTCC 60.306 63.158 0.00 0.00 0.00 3.71
911 2523 1.962321 GCTTCGGTTCTCCCCCTCTC 61.962 65.000 0.00 0.00 0.00 3.20
912 2524 1.990614 GCTTCGGTTCTCCCCCTCT 60.991 63.158 0.00 0.00 0.00 3.69
913 2525 2.245438 CTGCTTCGGTTCTCCCCCTC 62.245 65.000 0.00 0.00 0.00 4.30
914 2526 2.203938 TGCTTCGGTTCTCCCCCT 60.204 61.111 0.00 0.00 0.00 4.79
1356 2973 2.846371 CTTTTGGAGCTCCTCACGG 58.154 57.895 32.28 15.08 36.82 4.94
1370 2987 0.890683 CCCGCAAATCCTCAGCTTTT 59.109 50.000 0.00 0.00 0.00 2.27
1399 3016 1.348594 GCAATCGAACGGCACTAGC 59.651 57.895 0.00 0.00 41.10 3.42
1497 3115 1.148310 CGCCACAAGATCGTGACTTT 58.852 50.000 15.90 0.00 39.34 2.66
1517 3135 4.706476 TCAAGAAATTCGGATGGCAAATCT 59.294 37.500 0.00 0.00 0.00 2.40
1567 3185 6.540914 TCAAAAACTCTACACACGGAAATTCT 59.459 34.615 0.00 0.00 0.00 2.40
1578 3196 5.578776 CAAACCCTGTCAAAAACTCTACAC 58.421 41.667 0.00 0.00 0.00 2.90
1639 3257 1.948611 GCCTACCAAAATCGTGGCTCA 60.949 52.381 0.00 0.00 43.00 4.26
1659 3277 8.414003 TGAAGGCTACTGACATGTTATAACTAG 58.586 37.037 16.33 10.87 0.00 2.57
1857 3478 7.011482 GTGAGAAAGAACACATCTGTTTACACT 59.989 37.037 0.00 0.00 40.93 3.55
1861 3482 6.017934 GCTGTGAGAAAGAACACATCTGTTTA 60.018 38.462 0.00 0.00 44.21 2.01
1862 3483 5.220931 GCTGTGAGAAAGAACACATCTGTTT 60.221 40.000 0.00 0.00 44.21 2.83
1865 3486 3.188048 GGCTGTGAGAAAGAACACATCTG 59.812 47.826 0.00 0.00 44.21 2.90
1867 3488 3.141398 TGGCTGTGAGAAAGAACACATC 58.859 45.455 0.00 0.00 44.21 3.06
1868 3489 3.213206 TGGCTGTGAGAAAGAACACAT 57.787 42.857 0.00 0.00 44.21 3.21
1869 3490 2.708216 TGGCTGTGAGAAAGAACACA 57.292 45.000 0.00 0.00 43.31 3.72
1901 3525 6.205853 TCAACTCAACTAGAAGAGTCAGTCTC 59.794 42.308 17.72 0.00 43.88 3.36
1903 3527 6.320494 TCAACTCAACTAGAAGAGTCAGTC 57.680 41.667 17.72 0.00 43.88 3.51
1929 3553 5.133221 ACTTCCAATGCTGTAGTTTTCAGT 58.867 37.500 0.00 0.00 35.60 3.41
1938 3562 4.159693 ACGACATAGACTTCCAATGCTGTA 59.840 41.667 0.00 0.00 0.00 2.74
1940 3564 3.525537 ACGACATAGACTTCCAATGCTG 58.474 45.455 0.00 0.00 0.00 4.41
1941 3565 3.895232 ACGACATAGACTTCCAATGCT 57.105 42.857 0.00 0.00 0.00 3.79
1942 3566 4.184629 AGAACGACATAGACTTCCAATGC 58.815 43.478 0.00 0.00 0.00 3.56
1943 3567 5.446473 GCAAGAACGACATAGACTTCCAATG 60.446 44.000 0.00 0.00 0.00 2.82
1953 3577 2.341257 AGTGCAGCAAGAACGACATAG 58.659 47.619 0.00 0.00 0.00 2.23
1960 3584 4.641777 GCCAAGTGCAGCAAGAAC 57.358 55.556 0.00 0.00 40.77 3.01
1979 3603 1.966451 GTGCGCCTAGGCAACAACT 60.966 57.895 32.47 0.00 45.93 3.16
2002 3626 2.801631 CCCTCGCCCTGGAGATCAC 61.802 68.421 0.00 0.00 36.08 3.06
2024 3648 1.272037 CCCTTAACCCGGTAAAGGCAA 60.272 52.381 17.24 0.00 38.78 4.52
2034 3658 1.264826 CGACAAAACACCCTTAACCCG 59.735 52.381 0.00 0.00 0.00 5.28
2078 3827 2.817844 ACCTATTTGTTGACCGCTTTCC 59.182 45.455 0.00 0.00 0.00 3.13
2079 3828 5.616488 TTACCTATTTGTTGACCGCTTTC 57.384 39.130 0.00 0.00 0.00 2.62
2080 3829 4.082949 GCTTACCTATTTGTTGACCGCTTT 60.083 41.667 0.00 0.00 0.00 3.51
2083 3832 2.745281 TGCTTACCTATTTGTTGACCGC 59.255 45.455 0.00 0.00 0.00 5.68
2084 3833 4.035208 GGATGCTTACCTATTTGTTGACCG 59.965 45.833 0.00 0.00 0.00 4.79
2085 3834 4.338400 GGGATGCTTACCTATTTGTTGACC 59.662 45.833 0.00 0.00 0.00 4.02
2109 3860 2.290641 ACTTCGCTTCACAAACCATCAC 59.709 45.455 0.00 0.00 0.00 3.06
2113 3864 2.325583 AGACTTCGCTTCACAAACCA 57.674 45.000 0.00 0.00 0.00 3.67
2190 3942 9.256477 TCAACGTCAATGTAGATACCAAATATC 57.744 33.333 0.00 0.00 40.22 1.63
2211 3963 5.591643 ACAGTACTGCTAACATTTCAACG 57.408 39.130 22.90 0.00 0.00 4.10
2215 3967 8.030106 AGAAGACTACAGTACTGCTAACATTTC 58.970 37.037 22.90 16.03 0.00 2.17
2251 4003 2.905415 TTAGGAACGGAGGGAGTACA 57.095 50.000 0.00 0.00 0.00 2.90
2252 4004 7.232330 ACTTATATTTAGGAACGGAGGGAGTAC 59.768 40.741 0.00 0.00 0.00 2.73
2253 4005 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
2254 4006 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
2255 4007 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2256 4008 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2257 4009 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
2258 4010 8.422566 AGAAAGACTTATATTTAGGAACGGAGG 58.577 37.037 0.00 0.00 0.00 4.30
2275 4027 9.218525 TCCATATTGGAATCTCTAGAAAGACTT 57.781 33.333 0.00 0.00 45.00 3.01
2276 4028 8.789767 TCCATATTGGAATCTCTAGAAAGACT 57.210 34.615 0.00 0.00 45.00 3.24
2291 4043 4.219944 GCTCCGTATGTAGTCCATATTGGA 59.780 45.833 0.00 0.00 45.98 3.53
2292 4044 4.021456 TGCTCCGTATGTAGTCCATATTGG 60.021 45.833 0.00 0.00 38.29 3.16
2293 4045 5.134202 TGCTCCGTATGTAGTCCATATTG 57.866 43.478 0.00 0.00 38.29 1.90
2294 4046 5.801531 TTGCTCCGTATGTAGTCCATATT 57.198 39.130 0.00 0.00 38.29 1.28
2295 4047 5.801531 TTTGCTCCGTATGTAGTCCATAT 57.198 39.130 0.00 0.00 38.29 1.78
2296 4048 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
2297 4049 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
2298 4050 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
2299 4051 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
2300 4052 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2301 4053 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2302 4054 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2303 4055 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2304 4056 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2305 4057 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2306 4058 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2307 4059 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2308 4060 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2309 4061 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
2310 4062 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
2311 4063 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
2342 4094 9.339850 GGACTACATACGGATGTATATAGACAT 57.660 37.037 20.64 12.70 45.42 3.06
2343 4095 8.323567 TGGACTACATACGGATGTATATAGACA 58.676 37.037 20.64 12.12 45.42 3.41
2344 4096 8.728337 TGGACTACATACGGATGTATATAGAC 57.272 38.462 20.64 10.95 45.42 2.59
2345 4097 9.916360 AATGGACTACATACGGATGTATATAGA 57.084 33.333 20.64 5.22 45.42 1.98
2348 4100 9.653287 CAAAATGGACTACATACGGATGTATAT 57.347 33.333 20.64 12.15 45.42 0.86
2349 4101 8.862085 TCAAAATGGACTACATACGGATGTATA 58.138 33.333 20.64 8.48 45.42 1.47
2350 4102 7.732025 TCAAAATGGACTACATACGGATGTAT 58.268 34.615 20.64 11.04 45.42 2.29
2351 4103 7.114866 TCAAAATGGACTACATACGGATGTA 57.885 36.000 19.32 19.32 44.77 2.29
2353 4105 6.918892 TTCAAAATGGACTACATACGGATG 57.081 37.500 5.94 5.94 39.40 3.51
2354 4106 7.993183 AGATTTCAAAATGGACTACATACGGAT 59.007 33.333 0.00 0.00 39.40 4.18
2355 4107 7.335627 AGATTTCAAAATGGACTACATACGGA 58.664 34.615 0.00 0.00 39.40 4.69
2356 4108 7.495934 AGAGATTTCAAAATGGACTACATACGG 59.504 37.037 0.00 0.00 39.40 4.02
2357 4109 8.425577 AGAGATTTCAAAATGGACTACATACG 57.574 34.615 0.00 0.00 39.40 3.06
2384 4136 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
2385 4137 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
2386 4138 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2387 4139 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2388 4140 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2389 4141 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2390 4142 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2391 4143 7.300658 ACTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
2392 4144 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
2393 4145 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
2394 4146 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
2395 4147 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
2396 4148 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
2397 4149 3.463048 AACTACTCCCTCCGTTCCTAA 57.537 47.619 0.00 0.00 0.00 2.69
2398 4150 4.803329 ATAACTACTCCCTCCGTTCCTA 57.197 45.455 0.00 0.00 0.00 2.94
2399 4151 3.684408 ATAACTACTCCCTCCGTTCCT 57.316 47.619 0.00 0.00 0.00 3.36
2400 4152 4.261952 GCTAATAACTACTCCCTCCGTTCC 60.262 50.000 0.00 0.00 0.00 3.62
2401 4153 4.583907 AGCTAATAACTACTCCCTCCGTTC 59.416 45.833 0.00 0.00 0.00 3.95
2402 4154 4.544683 AGCTAATAACTACTCCCTCCGTT 58.455 43.478 0.00 0.00 0.00 4.44
2403 4155 4.143543 GAGCTAATAACTACTCCCTCCGT 58.856 47.826 0.00 0.00 0.00 4.69
2404 4156 3.506844 GGAGCTAATAACTACTCCCTCCG 59.493 52.174 0.00 0.00 42.44 4.63
2405 4157 3.506844 CGGAGCTAATAACTACTCCCTCC 59.493 52.174 0.00 0.00 44.89 4.30
2406 4158 4.769859 CGGAGCTAATAACTACTCCCTC 57.230 50.000 0.00 0.00 44.89 4.30
2434 4186 1.255667 GCCTACTGAAGACCGGGTCA 61.256 60.000 27.87 8.36 34.60 4.02
2440 4192 1.811679 GCAGCGCCTACTGAAGACC 60.812 63.158 2.29 0.00 40.25 3.85
2464 4216 1.950216 ACAACACAACACACACACACA 59.050 42.857 0.00 0.00 0.00 3.72
2465 4217 2.031595 TCACAACACAACACACACACAC 60.032 45.455 0.00 0.00 0.00 3.82
2466 4218 2.222027 TCACAACACAACACACACACA 58.778 42.857 0.00 0.00 0.00 3.72
2467 4219 2.225491 ACTCACAACACAACACACACAC 59.775 45.455 0.00 0.00 0.00 3.82
2468 4220 2.225255 CACTCACAACACAACACACACA 59.775 45.455 0.00 0.00 0.00 3.72
2469 4221 2.225491 ACACTCACAACACAACACACAC 59.775 45.455 0.00 0.00 0.00 3.82
2470 4222 2.225255 CACACTCACAACACAACACACA 59.775 45.455 0.00 0.00 0.00 3.72
2471 4223 2.225491 ACACACTCACAACACAACACAC 59.775 45.455 0.00 0.00 0.00 3.82
2472 4224 2.225255 CACACACTCACAACACAACACA 59.775 45.455 0.00 0.00 0.00 3.72
2473 4225 2.850321 CACACACTCACAACACAACAC 58.150 47.619 0.00 0.00 0.00 3.32
2474 4226 1.198867 GCACACACTCACAACACAACA 59.801 47.619 0.00 0.00 0.00 3.33
2475 4227 1.790123 CGCACACACTCACAACACAAC 60.790 52.381 0.00 0.00 0.00 3.32
2476 4228 0.445829 CGCACACACTCACAACACAA 59.554 50.000 0.00 0.00 0.00 3.33
2477 4229 0.672091 ACGCACACACTCACAACACA 60.672 50.000 0.00 0.00 0.00 3.72
2478 4230 0.247655 CACGCACACACTCACAACAC 60.248 55.000 0.00 0.00 0.00 3.32
2479 4231 0.672091 ACACGCACACACTCACAACA 60.672 50.000 0.00 0.00 0.00 3.33
2480 4232 1.005347 GTACACGCACACACTCACAAC 60.005 52.381 0.00 0.00 0.00 3.32
2481 4233 1.282817 GTACACGCACACACTCACAA 58.717 50.000 0.00 0.00 0.00 3.33
2525 4278 8.616076 CCTTCCTGTCAATTGAATAACTATGTC 58.384 37.037 10.35 0.00 0.00 3.06
2549 4302 5.568620 AAGTCATTTAACAGTCAGACCCT 57.431 39.130 0.00 0.00 0.00 4.34
2550 4303 5.351740 GCTAAGTCATTTAACAGTCAGACCC 59.648 44.000 0.00 0.00 0.00 4.46
2551 4304 6.166982 AGCTAAGTCATTTAACAGTCAGACC 58.833 40.000 0.00 0.00 0.00 3.85
2552 4305 7.659652 AAGCTAAGTCATTTAACAGTCAGAC 57.340 36.000 0.00 0.00 0.00 3.51
2553 4306 9.424319 CTAAAGCTAAGTCATTTAACAGTCAGA 57.576 33.333 0.00 0.00 0.00 3.27
2575 4328 9.458374 GAAAGTAAATTAAACAGCACAGCTAAA 57.542 29.630 0.00 0.00 36.40 1.85
2576 4329 7.801315 CGAAAGTAAATTAAACAGCACAGCTAA 59.199 33.333 0.00 0.00 36.40 3.09
2577 4330 7.041644 ACGAAAGTAAATTAAACAGCACAGCTA 60.042 33.333 0.00 0.00 46.88 3.32
2578 4331 6.142817 CGAAAGTAAATTAAACAGCACAGCT 58.857 36.000 0.00 0.00 40.77 4.24
2579 4332 5.912955 ACGAAAGTAAATTAAACAGCACAGC 59.087 36.000 0.00 0.00 46.88 4.40
2597 4350 5.920840 TGTTCTGTACTCATTCAGACGAAAG 59.079 40.000 0.00 0.00 39.87 2.62
2598 4351 5.838529 TGTTCTGTACTCATTCAGACGAAA 58.161 37.500 0.00 0.00 39.87 3.46
2599 4352 5.447624 TGTTCTGTACTCATTCAGACGAA 57.552 39.130 0.00 0.00 39.87 3.85
2600 4353 5.183140 TGATGTTCTGTACTCATTCAGACGA 59.817 40.000 0.00 0.00 39.87 4.20
2601 4354 5.402398 TGATGTTCTGTACTCATTCAGACG 58.598 41.667 0.00 0.00 39.87 4.18
2602 4355 7.009999 GTCATGATGTTCTGTACTCATTCAGAC 59.990 40.741 0.00 0.00 39.87 3.51
2603 4356 7.038048 GTCATGATGTTCTGTACTCATTCAGA 58.962 38.462 0.00 0.00 38.66 3.27
2604 4357 6.815142 TGTCATGATGTTCTGTACTCATTCAG 59.185 38.462 0.00 0.00 0.00 3.02
2605 4358 6.700352 TGTCATGATGTTCTGTACTCATTCA 58.300 36.000 0.00 0.00 0.00 2.57
2606 4359 7.279536 ACATGTCATGATGTTCTGTACTCATTC 59.720 37.037 19.77 0.00 32.38 2.67
2607 4360 7.065443 CACATGTCATGATGTTCTGTACTCATT 59.935 37.037 19.77 0.00 34.18 2.57
2608 4361 6.537660 CACATGTCATGATGTTCTGTACTCAT 59.462 38.462 19.77 0.00 34.18 2.90
2609 4362 5.870978 CACATGTCATGATGTTCTGTACTCA 59.129 40.000 19.77 0.00 34.18 3.41
2610 4363 5.292834 CCACATGTCATGATGTTCTGTACTC 59.707 44.000 19.77 0.00 34.18 2.59
2611 4364 5.046376 TCCACATGTCATGATGTTCTGTACT 60.046 40.000 19.77 0.00 34.18 2.73
2612 4365 5.063944 GTCCACATGTCATGATGTTCTGTAC 59.936 44.000 19.77 0.00 34.18 2.90
2613 4366 5.178061 GTCCACATGTCATGATGTTCTGTA 58.822 41.667 19.77 0.00 34.18 2.74
2614 4367 4.005650 GTCCACATGTCATGATGTTCTGT 58.994 43.478 19.77 0.00 34.18 3.41
2615 4368 4.004982 TGTCCACATGTCATGATGTTCTG 58.995 43.478 19.77 5.91 34.18 3.02
2616 4369 4.290711 TGTCCACATGTCATGATGTTCT 57.709 40.909 19.77 0.00 34.18 3.01
2617 4370 4.916870 CATGTCCACATGTCATGATGTTC 58.083 43.478 19.77 9.01 46.40 3.18
2618 4371 4.976224 CATGTCCACATGTCATGATGTT 57.024 40.909 19.77 0.00 46.40 2.71
2629 4382 2.877097 TGCTAACCACATGTCCACAT 57.123 45.000 0.00 0.00 36.96 3.21
2651 4404 4.196193 TGATTTTGCCTCCTATTACCGTG 58.804 43.478 0.00 0.00 0.00 4.94
2696 4577 5.667466 AGAGAACGTGTAAGAGAAAAACCA 58.333 37.500 0.00 0.00 0.00 3.67
2758 4639 2.224744 TGCTTGCCTGGTTCATCTACAA 60.225 45.455 0.00 0.00 0.00 2.41
2842 4723 5.919141 GGATAAGCTGCAAAGCAATAATCAG 59.081 40.000 1.02 0.00 38.41 2.90
2872 4753 7.613801 TCTTTAACTGCAAATTTAGCCCATCTA 59.386 33.333 9.23 0.00 0.00 1.98
2882 4763 5.928264 GCACTGGATCTTTAACTGCAAATTT 59.072 36.000 0.00 0.00 0.00 1.82
2891 4772 5.689383 TTGTTGAGCACTGGATCTTTAAC 57.311 39.130 0.00 0.00 0.00 2.01
3059 4940 6.071952 GCTAAGAAAAGATCCAATGTGACCAA 60.072 38.462 0.00 0.00 0.00 3.67
3075 4956 5.592688 AGTAACCTTGCTGTTGCTAAGAAAA 59.407 36.000 3.87 0.00 39.05 2.29
3300 5182 6.824305 ACTTGCTAGAAATAACAAGCATGT 57.176 33.333 1.04 8.39 42.55 3.21
3364 5246 8.722394 GCCTAATTTCACTCCAATAACTATAGC 58.278 37.037 0.00 0.00 0.00 2.97
3406 5288 3.943381 TGGAGCATCAGAAGCACATTTAG 59.057 43.478 0.00 0.00 36.25 1.85
3431 5313 3.259374 TCTCAGGCAGTTAGAAGAGTTGG 59.741 47.826 0.00 0.00 0.00 3.77
3432 5314 4.241681 GTCTCAGGCAGTTAGAAGAGTTG 58.758 47.826 0.00 0.00 0.00 3.16
3467 5349 4.811557 GCAGGAGTACACTGACATAAATCC 59.188 45.833 18.39 2.13 38.20 3.01
3472 5354 3.431415 ACAGCAGGAGTACACTGACATA 58.569 45.455 18.39 0.00 38.20 2.29
3486 5368 1.337447 CCCAAGCAATTCAACAGCAGG 60.337 52.381 0.00 0.00 0.00 4.85
3490 5372 1.962807 TCCACCCAAGCAATTCAACAG 59.037 47.619 0.00 0.00 0.00 3.16
3517 5399 6.483640 GGCAGGAGTACTCATATGGTAAAAAG 59.516 42.308 23.91 2.79 0.00 2.27
3522 5405 4.471078 AGGCAGGAGTACTCATATGGTA 57.529 45.455 23.91 1.63 0.00 3.25
3639 5522 3.343617 TGGCCTAGTCTAACAACAATGC 58.656 45.455 3.32 0.00 0.00 3.56
3649 5532 5.163301 GGAATGAAATGTCTGGCCTAGTCTA 60.163 44.000 3.32 0.00 0.00 2.59
3709 5592 8.519799 TTTACCCATTTCCTCATGAGATTTAC 57.480 34.615 24.62 0.00 0.00 2.01
3766 5649 2.435372 TTTGTGCTCTGTCAACCCTT 57.565 45.000 0.00 0.00 0.00 3.95
3767 5650 2.158623 TGATTTGTGCTCTGTCAACCCT 60.159 45.455 0.00 0.00 0.00 4.34
3768 5651 2.229792 TGATTTGTGCTCTGTCAACCC 58.770 47.619 0.00 0.00 0.00 4.11
3769 5652 3.316308 AGTTGATTTGTGCTCTGTCAACC 59.684 43.478 18.64 8.70 45.93 3.77
3770 5653 4.274459 AGAGTTGATTTGTGCTCTGTCAAC 59.726 41.667 16.45 16.45 45.42 3.18
3771 5654 4.274214 CAGAGTTGATTTGTGCTCTGTCAA 59.726 41.667 11.06 0.00 45.73 3.18
3772 5655 3.811497 CAGAGTTGATTTGTGCTCTGTCA 59.189 43.478 11.06 0.00 45.73 3.58
3773 5656 4.401525 CAGAGTTGATTTGTGCTCTGTC 57.598 45.455 11.06 0.00 45.73 3.51
3776 5659 3.406764 GGTCAGAGTTGATTTGTGCTCT 58.593 45.455 0.00 0.00 38.69 4.09
3777 5660 2.485814 GGGTCAGAGTTGATTTGTGCTC 59.514 50.000 0.00 0.00 35.39 4.26
3778 5661 2.107204 AGGGTCAGAGTTGATTTGTGCT 59.893 45.455 0.00 0.00 35.39 4.40
3779 5662 2.508526 AGGGTCAGAGTTGATTTGTGC 58.491 47.619 0.00 0.00 35.39 4.57
3780 5663 4.697352 CCTTAGGGTCAGAGTTGATTTGTG 59.303 45.833 0.00 0.00 35.39 3.33
3781 5664 4.263506 CCCTTAGGGTCAGAGTTGATTTGT 60.264 45.833 9.64 0.00 38.25 2.83
3782 5665 4.265073 CCCTTAGGGTCAGAGTTGATTTG 58.735 47.826 9.64 0.00 38.25 2.32
3783 5666 4.576330 CCCTTAGGGTCAGAGTTGATTT 57.424 45.455 9.64 0.00 38.25 2.17
3797 5680 1.347707 TGTGCTCTGTCAACCCTTAGG 59.652 52.381 0.00 0.00 40.04 2.69
3798 5681 2.839486 TGTGCTCTGTCAACCCTTAG 57.161 50.000 0.00 0.00 0.00 2.18
3799 5682 3.569194 TTTGTGCTCTGTCAACCCTTA 57.431 42.857 0.00 0.00 0.00 2.69
3839 5722 6.127054 TGTCTTGTTTATATCCCCTCACAGAG 60.127 42.308 0.00 0.00 0.00 3.35
3840 5723 5.724370 TGTCTTGTTTATATCCCCTCACAGA 59.276 40.000 0.00 0.00 0.00 3.41
3891 5776 2.028112 TGTGTATGTCTGTCAAGCCTCC 60.028 50.000 0.00 0.00 0.00 4.30
3949 5834 4.764679 TGATAAAAATCGTGCAACAGCT 57.235 36.364 0.00 0.00 35.74 4.24
3995 5880 3.136641 ACTGGAGGTGAATAGGGACAT 57.863 47.619 0.00 0.00 0.00 3.06
4195 6080 0.818296 TCAAGCCGCTTCTCTAGGAC 59.182 55.000 1.56 0.00 0.00 3.85
4209 6094 2.896443 CGAGGGGAGAGGTCAAGC 59.104 66.667 0.00 0.00 0.00 4.01
4221 6106 1.144936 GAAGGAGACATGGCGAGGG 59.855 63.158 0.00 0.00 0.00 4.30
4249 6134 5.503031 CGAAGGACATTACACATCAGCATTC 60.503 44.000 0.00 0.00 0.00 2.67
4258 6143 5.358090 TGTTGTTACGAAGGACATTACACA 58.642 37.500 0.00 0.00 0.00 3.72
4331 6216 1.157870 AACGTGGTTGAACTCGCCTG 61.158 55.000 11.58 0.00 0.00 4.85
4652 6537 2.442830 GAATGCCCCCAAGCCTCC 60.443 66.667 0.00 0.00 0.00 4.30
4653 6538 1.305213 TTGAATGCCCCCAAGCCTC 60.305 57.895 0.00 0.00 0.00 4.70
4697 6582 6.542370 ACATTTACCCTATCAAGTTCCATTCG 59.458 38.462 0.00 0.00 0.00 3.34
4754 6639 1.202348 GGGCAAAATGGACTACAGCAC 59.798 52.381 0.00 0.00 0.00 4.40
4786 6671 4.463539 TGCCTCGTATCCAACTAAACACTA 59.536 41.667 0.00 0.00 0.00 2.74
4935 6824 4.111916 CGAACTGCAACCAACAAAAGAAT 58.888 39.130 0.00 0.00 0.00 2.40
5332 7275 1.190323 CTCTTTCTGCGACGAACACAC 59.810 52.381 0.00 0.00 0.00 3.82
5561 7504 3.505464 ATCTGTTACACAGCGAGTACC 57.495 47.619 0.00 0.00 45.54 3.34
5687 7631 4.681744 AGCAGCAAAAGAATCGACAAAAA 58.318 34.783 0.00 0.00 0.00 1.94
5688 7632 4.305989 AGCAGCAAAAGAATCGACAAAA 57.694 36.364 0.00 0.00 0.00 2.44
5689 7633 3.988379 AGCAGCAAAAGAATCGACAAA 57.012 38.095 0.00 0.00 0.00 2.83
5690 7634 3.314913 TGAAGCAGCAAAAGAATCGACAA 59.685 39.130 0.00 0.00 0.00 3.18
5691 7635 2.877786 TGAAGCAGCAAAAGAATCGACA 59.122 40.909 0.00 0.00 0.00 4.35
5692 7636 3.229552 GTGAAGCAGCAAAAGAATCGAC 58.770 45.455 0.00 0.00 0.00 4.20
5693 7637 2.877786 TGTGAAGCAGCAAAAGAATCGA 59.122 40.909 0.00 0.00 0.00 3.59
5694 7638 3.272439 TGTGAAGCAGCAAAAGAATCG 57.728 42.857 0.00 0.00 0.00 3.34
5695 7639 5.971895 TTTTGTGAAGCAGCAAAAGAATC 57.028 34.783 0.00 0.00 38.96 2.52
5700 7644 4.819769 AGTTCTTTTGTGAAGCAGCAAAA 58.180 34.783 0.00 0.00 40.78 2.44
5701 7645 4.454728 AGTTCTTTTGTGAAGCAGCAAA 57.545 36.364 0.00 0.00 33.40 3.68
5702 7646 4.158394 AGAAGTTCTTTTGTGAAGCAGCAA 59.842 37.500 0.00 0.00 0.00 3.91
5703 7647 3.696051 AGAAGTTCTTTTGTGAAGCAGCA 59.304 39.130 0.00 0.00 0.00 4.41
5704 7648 4.040376 CAGAAGTTCTTTTGTGAAGCAGC 58.960 43.478 1.56 0.00 0.00 5.25
5705 7649 4.040376 GCAGAAGTTCTTTTGTGAAGCAG 58.960 43.478 1.56 0.00 0.00 4.24
5706 7650 3.181487 GGCAGAAGTTCTTTTGTGAAGCA 60.181 43.478 1.56 0.00 0.00 3.91
5707 7651 3.375642 GGCAGAAGTTCTTTTGTGAAGC 58.624 45.455 1.56 0.76 0.00 3.86
5708 7652 3.548818 CCGGCAGAAGTTCTTTTGTGAAG 60.549 47.826 1.56 0.00 0.00 3.02
5709 7653 2.357637 CCGGCAGAAGTTCTTTTGTGAA 59.642 45.455 1.56 0.00 0.00 3.18
5710 7654 1.946768 CCGGCAGAAGTTCTTTTGTGA 59.053 47.619 1.56 0.00 0.00 3.58
5711 7655 1.001378 CCCGGCAGAAGTTCTTTTGTG 60.001 52.381 1.56 0.00 0.00 3.33
5712 7656 1.318576 CCCGGCAGAAGTTCTTTTGT 58.681 50.000 1.56 0.00 0.00 2.83
5713 7657 1.266989 GACCCGGCAGAAGTTCTTTTG 59.733 52.381 1.56 0.00 0.00 2.44
5714 7658 1.143073 AGACCCGGCAGAAGTTCTTTT 59.857 47.619 1.56 0.00 0.00 2.27
5715 7659 0.765510 AGACCCGGCAGAAGTTCTTT 59.234 50.000 1.56 0.00 0.00 2.52
5716 7660 0.765510 AAGACCCGGCAGAAGTTCTT 59.234 50.000 1.56 0.00 0.00 2.52
5717 7661 0.765510 AAAGACCCGGCAGAAGTTCT 59.234 50.000 0.00 0.00 0.00 3.01
5718 7662 1.605753 AAAAGACCCGGCAGAAGTTC 58.394 50.000 0.00 0.00 0.00 3.01
5719 7663 2.158726 TGTAAAAGACCCGGCAGAAGTT 60.159 45.455 0.00 0.00 0.00 2.66
5720 7664 1.418637 TGTAAAAGACCCGGCAGAAGT 59.581 47.619 0.00 0.00 0.00 3.01
5721 7665 1.804748 GTGTAAAAGACCCGGCAGAAG 59.195 52.381 0.00 0.00 0.00 2.85
5722 7666 1.418637 AGTGTAAAAGACCCGGCAGAA 59.581 47.619 0.00 0.00 0.00 3.02
5723 7667 1.053424 AGTGTAAAAGACCCGGCAGA 58.947 50.000 0.00 0.00 0.00 4.26
5724 7668 2.344025 GTAGTGTAAAAGACCCGGCAG 58.656 52.381 0.00 0.00 0.00 4.85
5725 7669 1.002315 GGTAGTGTAAAAGACCCGGCA 59.998 52.381 0.00 0.00 0.00 5.69
5726 7670 1.277273 AGGTAGTGTAAAAGACCCGGC 59.723 52.381 0.00 0.00 31.93 6.13
5727 7671 4.161001 ACATAGGTAGTGTAAAAGACCCGG 59.839 45.833 0.00 0.00 31.93 5.73
5728 7672 5.126707 AGACATAGGTAGTGTAAAAGACCCG 59.873 44.000 0.00 0.00 31.93 5.28
5729 7673 6.541934 AGACATAGGTAGTGTAAAAGACCC 57.458 41.667 0.00 0.00 31.93 4.46
5756 7700 9.074576 TGTTCTAGCCGATCTAAATATCAAGTA 57.925 33.333 0.00 0.00 0.00 2.24
5757 7701 7.952671 TGTTCTAGCCGATCTAAATATCAAGT 58.047 34.615 0.00 0.00 0.00 3.16
5758 7702 8.994429 ATGTTCTAGCCGATCTAAATATCAAG 57.006 34.615 0.00 0.00 0.00 3.02
5759 7703 9.778741 AAATGTTCTAGCCGATCTAAATATCAA 57.221 29.630 0.00 0.00 0.00 2.57
5760 7704 9.424319 GAAATGTTCTAGCCGATCTAAATATCA 57.576 33.333 0.00 0.00 0.00 2.15
5761 7705 9.424319 TGAAATGTTCTAGCCGATCTAAATATC 57.576 33.333 0.00 0.00 0.00 1.63
5762 7706 9.209175 GTGAAATGTTCTAGCCGATCTAAATAT 57.791 33.333 0.00 0.00 0.00 1.28
5763 7707 8.201464 TGTGAAATGTTCTAGCCGATCTAAATA 58.799 33.333 0.00 0.00 0.00 1.40
5764 7708 7.047891 TGTGAAATGTTCTAGCCGATCTAAAT 58.952 34.615 0.00 0.00 0.00 1.40
5765 7709 6.403049 TGTGAAATGTTCTAGCCGATCTAAA 58.597 36.000 0.00 0.00 0.00 1.85
5766 7710 5.972935 TGTGAAATGTTCTAGCCGATCTAA 58.027 37.500 0.00 0.00 0.00 2.10
5767 7711 5.592104 TGTGAAATGTTCTAGCCGATCTA 57.408 39.130 0.00 0.00 0.00 1.98
5768 7712 4.471904 TGTGAAATGTTCTAGCCGATCT 57.528 40.909 0.00 0.00 0.00 2.75
5769 7713 5.545658 TTTGTGAAATGTTCTAGCCGATC 57.454 39.130 0.00 0.00 0.00 3.69
5770 7714 5.705441 TCTTTTGTGAAATGTTCTAGCCGAT 59.295 36.000 0.00 0.00 0.00 4.18
5771 7715 5.060506 TCTTTTGTGAAATGTTCTAGCCGA 58.939 37.500 0.00 0.00 0.00 5.54
5772 7716 5.356882 TCTTTTGTGAAATGTTCTAGCCG 57.643 39.130 0.00 0.00 0.00 5.52
5773 7717 6.024049 CGATCTTTTGTGAAATGTTCTAGCC 58.976 40.000 0.00 0.00 0.00 3.93
5774 7718 6.603095 ACGATCTTTTGTGAAATGTTCTAGC 58.397 36.000 0.00 0.00 0.00 3.42
5775 7719 8.023050 AGACGATCTTTTGTGAAATGTTCTAG 57.977 34.615 0.00 0.00 0.00 2.43
5776 7720 7.962964 AGACGATCTTTTGTGAAATGTTCTA 57.037 32.000 0.00 0.00 0.00 2.10
5777 7721 6.867662 AGACGATCTTTTGTGAAATGTTCT 57.132 33.333 0.00 0.00 0.00 3.01
5778 7722 8.018677 TCTAGACGATCTTTTGTGAAATGTTC 57.981 34.615 0.00 0.00 0.00 3.18
5779 7723 7.962964 TCTAGACGATCTTTTGTGAAATGTT 57.037 32.000 0.00 0.00 0.00 2.71
5780 7724 7.441157 TGTTCTAGACGATCTTTTGTGAAATGT 59.559 33.333 0.00 0.00 0.00 2.71
5781 7725 7.796838 TGTTCTAGACGATCTTTTGTGAAATG 58.203 34.615 0.00 0.00 0.00 2.32
5782 7726 7.962964 TGTTCTAGACGATCTTTTGTGAAAT 57.037 32.000 0.00 0.00 0.00 2.17
5783 7727 7.095229 CCATGTTCTAGACGATCTTTTGTGAAA 60.095 37.037 0.00 0.00 0.00 2.69
5784 7728 6.368791 CCATGTTCTAGACGATCTTTTGTGAA 59.631 38.462 0.00 0.00 0.00 3.18
5785 7729 5.869344 CCATGTTCTAGACGATCTTTTGTGA 59.131 40.000 0.00 0.00 0.00 3.58
5786 7730 5.063944 CCCATGTTCTAGACGATCTTTTGTG 59.936 44.000 0.00 0.00 0.00 3.33
5787 7731 5.178797 CCCATGTTCTAGACGATCTTTTGT 58.821 41.667 0.00 0.00 0.00 2.83
5788 7732 4.034510 GCCCATGTTCTAGACGATCTTTTG 59.965 45.833 0.00 0.00 0.00 2.44
5789 7733 4.080863 AGCCCATGTTCTAGACGATCTTTT 60.081 41.667 0.00 0.00 0.00 2.27
5790 7734 3.452627 AGCCCATGTTCTAGACGATCTTT 59.547 43.478 0.00 0.00 0.00 2.52
5791 7735 3.034635 AGCCCATGTTCTAGACGATCTT 58.965 45.455 0.00 0.00 0.00 2.40
5792 7736 2.625790 GAGCCCATGTTCTAGACGATCT 59.374 50.000 0.00 0.00 0.00 2.75
5793 7737 2.362397 TGAGCCCATGTTCTAGACGATC 59.638 50.000 0.00 0.00 0.00 3.69
5794 7738 2.363680 CTGAGCCCATGTTCTAGACGAT 59.636 50.000 0.00 0.00 0.00 3.73
5795 7739 1.751351 CTGAGCCCATGTTCTAGACGA 59.249 52.381 0.00 0.00 0.00 4.20
5796 7740 1.751351 TCTGAGCCCATGTTCTAGACG 59.249 52.381 0.00 0.00 0.00 4.18
5797 7741 4.100808 AGAATCTGAGCCCATGTTCTAGAC 59.899 45.833 0.00 0.00 29.66 2.59
5798 7742 4.100653 CAGAATCTGAGCCCATGTTCTAGA 59.899 45.833 3.77 0.00 32.44 2.43
5799 7743 4.378774 CAGAATCTGAGCCCATGTTCTAG 58.621 47.826 3.77 0.00 32.44 2.43
5800 7744 3.432749 GCAGAATCTGAGCCCATGTTCTA 60.433 47.826 15.38 0.00 32.44 2.10
5801 7745 2.683152 GCAGAATCTGAGCCCATGTTCT 60.683 50.000 15.38 0.00 32.44 3.01
5802 7746 1.674962 GCAGAATCTGAGCCCATGTTC 59.325 52.381 15.38 0.00 32.44 3.18
5803 7747 1.760192 GCAGAATCTGAGCCCATGTT 58.240 50.000 15.38 0.00 32.44 2.71
5855 7799 4.063967 CGGGCGCACAGTCACCTA 62.064 66.667 11.77 0.00 0.00 3.08
5883 7827 4.541705 TCTGATCAACCCTTTCCAAAACA 58.458 39.130 0.00 0.00 0.00 2.83
5902 7846 1.274712 AGAAGAGGGGCTTGACTCTG 58.725 55.000 0.00 0.00 42.93 3.35
5972 7916 0.912487 TCCCCAAGCCACGTATCCTT 60.912 55.000 0.00 0.00 0.00 3.36
6068 8012 4.022242 GCTAATATTGAGAGGCGTGGACTA 60.022 45.833 0.00 0.00 0.00 2.59
6283 8227 6.263617 TGATTCGCAAAGGTACCTTAACTTTT 59.736 34.615 27.33 8.05 42.77 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.