Multiple sequence alignment - TraesCS2A01G203600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G203600 chr2A 100.000 6889 0 0 1 6889 179663290 179670178 0.000000e+00 12722.0
1 TraesCS2A01G203600 chr2A 96.571 175 4 2 6391 6565 706218315 706218143 8.740000e-74 289.0
2 TraesCS2A01G203600 chr2A 86.667 165 12 6 6124 6282 179669354 179669514 2.550000e-39 174.0
3 TraesCS2A01G203600 chr2A 86.667 165 12 6 6065 6225 179669413 179669571 2.550000e-39 174.0
4 TraesCS2A01G203600 chr2A 88.696 115 9 3 6278 6390 738347159 738347271 3.350000e-28 137.0
5 TraesCS2A01G203600 chr2B 95.365 5070 155 30 1040 6052 227076518 227081564 0.000000e+00 7987.0
6 TraesCS2A01G203600 chr2B 87.379 412 45 5 1 412 227072851 227073255 3.760000e-127 466.0
7 TraesCS2A01G203600 chr2B 84.598 448 42 15 511 931 227075705 227076152 2.970000e-113 420.0
8 TraesCS2A01G203600 chr2B 96.610 177 6 0 6389 6565 244915600 244915776 1.880000e-75 294.0
9 TraesCS2A01G203600 chr2B 92.462 199 12 2 6374 6572 741146738 741146933 1.460000e-71 281.0
10 TraesCS2A01G203600 chr2B 79.141 326 50 9 6579 6886 172178803 172179128 7.000000e-50 209.0
11 TraesCS2A01G203600 chr2B 85.446 213 17 6 6182 6390 227081601 227081803 7.000000e-50 209.0
12 TraesCS2A01G203600 chr2B 83.636 220 22 6 6558 6776 227081787 227081993 1.960000e-45 195.0
13 TraesCS2A01G203600 chr2D 90.630 4162 216 66 1 4048 170454883 170450782 0.000000e+00 5365.0
14 TraesCS2A01G203600 chr2D 94.724 1194 55 7 4039 5229 170450412 170449224 0.000000e+00 1849.0
15 TraesCS2A01G203600 chr2D 90.145 619 17 7 5343 5932 170449169 170448566 0.000000e+00 765.0
16 TraesCS2A01G203600 chr2D 88.034 117 8 5 6277 6390 76064277 76064164 4.330000e-27 134.0
17 TraesCS2A01G203600 chr2D 88.034 117 8 5 6277 6390 191678622 191678509 4.330000e-27 134.0
18 TraesCS2A01G203600 chr2D 86.275 102 6 6 5945 6039 22200818 22200918 3.400000e-18 104.0
19 TraesCS2A01G203600 chr4A 96.610 177 6 0 6384 6560 89423260 89423084 1.880000e-75 294.0
20 TraesCS2A01G203600 chr4A 97.619 168 4 0 6390 6557 546625016 546624849 8.740000e-74 289.0
21 TraesCS2A01G203600 chr4A 80.368 326 45 11 6579 6886 691505585 691505909 5.370000e-56 230.0
22 TraesCS2A01G203600 chr4A 79.048 315 59 6 6579 6887 531324801 531325114 7.000000e-50 209.0
23 TraesCS2A01G203600 chr3A 96.629 178 5 1 6386 6563 565776550 565776374 1.880000e-75 294.0
24 TraesCS2A01G203600 chr3A 85.083 181 25 2 6581 6760 703417845 703417666 4.240000e-42 183.0
25 TraesCS2A01G203600 chr3A 82.857 175 29 1 6580 6753 55617726 55617900 9.250000e-34 156.0
26 TraesCS2A01G203600 chr3A 90.909 44 3 1 6236 6279 661647681 661647723 2.680000e-04 58.4
27 TraesCS2A01G203600 chr7A 96.111 180 5 2 6391 6570 133673563 133673740 6.760000e-75 292.0
28 TraesCS2A01G203600 chr1B 96.610 177 5 1 6386 6562 456742193 456742368 6.760000e-75 292.0
29 TraesCS2A01G203600 chr1B 96.089 179 6 1 6385 6563 144229207 144229384 2.430000e-74 291.0
30 TraesCS2A01G203600 chr1B 93.269 104 7 0 5255 5358 543023156 543023053 3.330000e-33 154.0
31 TraesCS2A01G203600 chr1B 84.615 104 11 5 5943 6042 628502837 628502735 1.580000e-16 99.0
32 TraesCS2A01G203600 chr3B 79.878 328 46 10 6579 6886 383472321 383471994 8.990000e-54 222.0
33 TraesCS2A01G203600 chr3B 98.969 97 1 0 5255 5351 421902958 421903054 2.550000e-39 174.0
34 TraesCS2A01G203600 chr3B 94.949 99 5 0 5253 5351 330797987 330798085 9.250000e-34 156.0
35 TraesCS2A01G203600 chrUn 78.947 285 51 5 6579 6855 30547903 30547620 1.180000e-42 185.0
36 TraesCS2A01G203600 chrUn 78.947 285 51 7 6579 6855 30572247 30571964 1.180000e-42 185.0
37 TraesCS2A01G203600 chrUn 78.671 286 51 8 6579 6855 134446847 134446563 1.530000e-41 182.0
38 TraesCS2A01G203600 chrUn 77.660 282 49 10 6579 6850 30604053 30603776 7.150000e-35 159.0
39 TraesCS2A01G203600 chrUn 100.000 34 0 0 6231 6264 110519032 110519065 5.770000e-06 63.9
40 TraesCS2A01G203600 chr6D 78.596 285 52 7 6579 6855 1016099 1016382 5.490000e-41 180.0
41 TraesCS2A01G203600 chr6D 84.536 97 10 4 5944 6039 457685391 457685483 2.650000e-14 91.6
42 TraesCS2A01G203600 chr6D 91.667 48 3 1 6231 6278 368363620 368363666 1.600000e-06 65.8
43 TraesCS2A01G203600 chr4D 83.523 176 28 1 6579 6753 347519584 347519409 5.530000e-36 163.0
44 TraesCS2A01G203600 chr4D 89.474 114 6 4 6280 6390 96888380 96888270 9.320000e-29 139.0
45 TraesCS2A01G203600 chr4D 86.000 100 8 4 5945 6039 301525915 301526013 1.220000e-17 102.0
46 TraesCS2A01G203600 chr4D 86.316 95 9 4 5945 6039 486613131 486613221 4.400000e-17 100.0
47 TraesCS2A01G203600 chr6B 92.727 110 8 0 5253 5362 529769800 529769691 7.150000e-35 159.0
48 TraesCS2A01G203600 chr6B 92.523 107 8 0 5255 5361 276558772 276558666 3.330000e-33 154.0
49 TraesCS2A01G203600 chr7B 91.228 114 8 1 5255 5366 354415168 354415281 3.330000e-33 154.0
50 TraesCS2A01G203600 chr7B 89.381 113 7 4 6281 6390 332644181 332644071 3.350000e-28 137.0
51 TraesCS2A01G203600 chr7B 89.583 48 3 2 6235 6281 84023589 84023543 7.460000e-05 60.2
52 TraesCS2A01G203600 chr7D 92.523 107 7 1 5246 5351 168579909 168580015 1.200000e-32 152.0
53 TraesCS2A01G203600 chr7D 88.430 121 7 6 6273 6390 588414826 588414942 9.320000e-29 139.0
54 TraesCS2A01G203600 chr7D 100.000 33 0 0 6231 6263 603826524 603826492 2.070000e-05 62.1
55 TraesCS2A01G203600 chr1A 91.071 112 8 2 5252 5361 474641777 474641666 4.300000e-32 150.0
56 TraesCS2A01G203600 chr5D 90.265 113 5 5 6281 6390 414230176 414230067 7.200000e-30 143.0
57 TraesCS2A01G203600 chr5D 83.929 112 8 9 5941 6042 482454439 482454328 1.580000e-16 99.0
58 TraesCS2A01G203600 chr5D 87.755 49 3 2 6236 6282 390271831 390271878 3.000000e-03 54.7
59 TraesCS2A01G203600 chr5A 87.705 122 9 5 6273 6390 654405595 654405714 3.350000e-28 137.0
60 TraesCS2A01G203600 chr5A 93.023 43 2 1 6236 6278 169296078 169296119 2.070000e-05 62.1
61 TraesCS2A01G203600 chr6A 85.263 95 12 2 5945 6039 516599752 516599844 5.690000e-16 97.1
62 TraesCS2A01G203600 chr6A 82.569 109 10 9 5941 6042 477138620 477138514 3.420000e-13 87.9
63 TraesCS2A01G203600 chr5B 90.698 43 3 1 6236 6278 147440545 147440586 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G203600 chr2A 179663290 179670178 6888 False 4356.666667 12722 91.111333 1 6889 3 chr2A.!!$F2 6888
1 TraesCS2A01G203600 chr2B 227072851 227081993 9142 False 1855.400000 7987 87.284800 1 6776 5 chr2B.!!$F4 6775
2 TraesCS2A01G203600 chr2D 170448566 170454883 6317 True 2659.666667 5365 91.833000 1 5932 3 chr2D.!!$R3 5931

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
52 53 0.090843 GCTCTTGCGTAACGTTCGTC 59.909 55.000 2.82 5.95 0.00 4.20 F
1231 3916 0.180171 TCGGCACCACCATCATTAGG 59.820 55.000 0.00 0.00 39.03 2.69 F
1236 3921 0.180406 ACCACCATCATTAGGTCGGC 59.820 55.000 0.00 0.00 37.23 5.54 F
1885 4606 0.238553 GAGCCAAAAGGAAGCGACAC 59.761 55.000 0.00 0.00 0.00 3.67 F
1889 4610 1.068333 CCAAAAGGAAGCGACACCATG 60.068 52.381 0.00 0.00 0.00 3.66 F
2935 5668 1.141185 AGTGGATTAGCTTAGCCCCC 58.859 55.000 4.29 0.00 0.00 5.40 F
2955 5688 4.080015 CCCCTCATACCACATTTTGTAGGA 60.080 45.833 0.00 0.00 0.00 2.94 F
4322 7471 4.647564 AGAACCAGTGTCATCTTCCAAT 57.352 40.909 0.00 0.00 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1411 4096 0.105039 GTCCGGCTCCTCGATTGATT 59.895 55.000 0.0 0.00 0.00 2.57 R
2756 5489 1.072965 AGTTCTTCACCTCAAGCCAGG 59.927 52.381 0.0 0.00 39.80 4.45 R
2910 5643 3.628032 GGCTAAGCTAATCCACTGAAACC 59.372 47.826 0.0 0.00 0.00 3.27 R
3679 6446 0.391228 TAGCAGCTGGTGAAACACGA 59.609 50.000 28.1 2.34 39.98 4.35 R
3887 6655 5.815581 ACTTGCAACAGATAATAACCCTGA 58.184 37.500 0.0 0.00 0.00 3.86 R
4322 7471 3.159472 GCCATCCCAAGCATTATCATCA 58.841 45.455 0.0 0.00 0.00 3.07 R
4325 7474 3.225104 GAAGCCATCCCAAGCATTATCA 58.775 45.455 0.0 0.00 0.00 2.15 R
6090 9301 0.031111 CCTACTCCCTCCATCCCACA 60.031 60.000 0.0 0.00 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 2.026262 ACCCGAATTCAATGGTGCTAGT 60.026 45.455 6.22 0.00 0.00 2.57
52 53 0.090843 GCTCTTGCGTAACGTTCGTC 59.909 55.000 2.82 5.95 0.00 4.20
65 66 1.007154 TTCGTCGCGAACACCATCA 60.007 52.632 12.06 0.00 41.05 3.07
115 116 2.032620 CCTGGACGCTATGAACTACCT 58.967 52.381 0.00 0.00 0.00 3.08
131 132 3.881089 ACTACCTGTAACAAACTTGCCAC 59.119 43.478 0.00 0.00 0.00 5.01
135 136 4.951094 ACCTGTAACAAACTTGCCACTAAA 59.049 37.500 0.00 0.00 0.00 1.85
160 161 0.543277 CATTCCTGCTCACCCTGCTA 59.457 55.000 0.00 0.00 0.00 3.49
225 226 4.349365 CTCTAAGGAAGAGGAAGGACTGT 58.651 47.826 0.00 0.00 46.98 3.55
228 229 2.534990 AGGAAGAGGAAGGACTGTGAG 58.465 52.381 0.00 0.00 0.00 3.51
233 234 2.435059 GAAGGACTGTGAGGCGGC 60.435 66.667 0.00 0.00 0.00 6.53
274 275 4.586001 AGATCAAACACCTTCATGCTGTTT 59.414 37.500 0.00 0.00 38.39 2.83
275 276 4.305989 TCAAACACCTTCATGCTGTTTC 57.694 40.909 7.33 0.00 36.25 2.78
276 277 3.698539 TCAAACACCTTCATGCTGTTTCA 59.301 39.130 7.33 0.00 36.25 2.69
277 278 3.715628 AACACCTTCATGCTGTTTCAC 57.284 42.857 0.00 0.00 0.00 3.18
295 296 1.055040 ACAGGAGCTCTTGAGCTTGT 58.945 50.000 30.40 20.93 46.36 3.16
296 297 1.419387 ACAGGAGCTCTTGAGCTTGTT 59.581 47.619 30.40 4.96 46.36 2.83
297 298 1.805345 CAGGAGCTCTTGAGCTTGTTG 59.195 52.381 23.68 17.68 46.36 3.33
299 300 2.634940 AGGAGCTCTTGAGCTTGTTGTA 59.365 45.455 23.68 0.00 46.36 2.41
303 304 5.215252 AGCTCTTGAGCTTGTTGTAGTTA 57.785 39.130 18.29 0.00 43.52 2.24
336 338 8.181487 TCTATTTTAACGATCCTTTTGAGTCG 57.819 34.615 0.00 0.00 39.78 4.18
347 349 4.819630 TCCTTTTGAGTCGCAAGTTGTATT 59.180 37.500 4.48 0.00 37.87 1.89
350 352 5.940192 TTTGAGTCGCAAGTTGTATTCAT 57.060 34.783 4.48 0.00 37.87 2.57
351 353 5.940192 TTGAGTCGCAAGTTGTATTCATT 57.060 34.783 4.48 0.00 39.48 2.57
361 363 8.434661 CGCAAGTTGTATTCATTGCTTTTATTT 58.565 29.630 4.48 0.00 44.51 1.40
362 364 9.532697 GCAAGTTGTATTCATTGCTTTTATTTG 57.467 29.630 4.48 0.00 43.59 2.32
394 396 4.775058 ACTGTAACTCTGTGCTACTCTG 57.225 45.455 0.00 0.00 0.00 3.35
429 2808 9.377312 TGGCTTTATTAATTTAAAACTGGATGC 57.623 29.630 0.00 0.00 0.00 3.91
488 2869 4.029087 GCGACGCAAAACAATAATTCAGAC 59.971 41.667 16.42 0.00 0.00 3.51
489 2870 4.257447 CGACGCAAAACAATAATTCAGACG 59.743 41.667 0.00 0.00 0.00 4.18
490 2871 5.103290 ACGCAAAACAATAATTCAGACGT 57.897 34.783 0.00 0.00 0.00 4.34
491 2872 5.516090 ACGCAAAACAATAATTCAGACGTT 58.484 33.333 0.00 0.00 0.00 3.99
492 2873 6.660722 ACGCAAAACAATAATTCAGACGTTA 58.339 32.000 0.00 0.00 0.00 3.18
493 2874 7.133513 ACGCAAAACAATAATTCAGACGTTAA 58.866 30.769 0.00 0.00 0.00 2.01
494 2875 7.806014 ACGCAAAACAATAATTCAGACGTTAAT 59.194 29.630 0.00 0.00 0.00 1.40
495 2876 8.635124 CGCAAAACAATAATTCAGACGTTAATT 58.365 29.630 0.00 0.00 0.00 1.40
572 2955 4.261952 CGAGGATAAGCATGACTCAGACAT 60.262 45.833 0.00 0.00 0.00 3.06
579 2962 2.071540 CATGACTCAGACATGCACGTT 58.928 47.619 4.11 0.00 38.58 3.99
585 2968 3.376859 ACTCAGACATGCACGTTTCAAAA 59.623 39.130 0.00 0.00 0.00 2.44
594 2977 3.728221 TGCACGTTTCAAAAATCATCACG 59.272 39.130 0.00 0.00 0.00 4.35
603 2986 6.293713 TCAAAAATCATCACGAAAACGAGA 57.706 33.333 0.00 0.00 0.00 4.04
607 2990 4.928661 ATCATCACGAAAACGAGAAAGG 57.071 40.909 0.00 0.00 0.00 3.11
611 3008 3.523547 TCACGAAAACGAGAAAGGTTGA 58.476 40.909 0.00 0.00 0.00 3.18
613 3010 3.308866 CACGAAAACGAGAAAGGTTGACT 59.691 43.478 0.00 0.00 0.00 3.41
621 3018 1.003696 AGAAAGGTTGACTAGGCAGGC 59.996 52.381 0.00 0.00 0.00 4.85
640 3037 3.118454 GCTGGTGCGCGTGTATGT 61.118 61.111 8.43 0.00 0.00 2.29
666 3063 5.278463 CGTGTCATCTTCATGGTTCCTTTTT 60.278 40.000 0.00 0.00 0.00 1.94
813 3223 3.220658 TGGTCTGTCGTGCCGTGA 61.221 61.111 0.00 0.00 0.00 4.35
854 3264 1.632046 GCACCGTCATTACCACACCG 61.632 60.000 0.00 0.00 0.00 4.94
1013 3430 1.682854 CTCCTCTGCACATCTCTCCTC 59.317 57.143 0.00 0.00 0.00 3.71
1014 3431 0.752054 CCTCTGCACATCTCTCCTCC 59.248 60.000 0.00 0.00 0.00 4.30
1015 3432 0.752054 CTCTGCACATCTCTCCTCCC 59.248 60.000 0.00 0.00 0.00 4.30
1016 3433 0.689080 TCTGCACATCTCTCCTCCCC 60.689 60.000 0.00 0.00 0.00 4.81
1055 3739 2.877708 GCAAAAACAGGGAGGAGAGAGG 60.878 54.545 0.00 0.00 0.00 3.69
1093 3777 2.031163 CCGAATCCCTGCGATCCC 59.969 66.667 0.00 0.00 0.00 3.85
1094 3778 2.031163 CGAATCCCTGCGATCCCC 59.969 66.667 0.00 0.00 0.00 4.81
1184 3869 1.671379 GGCACAAGAAGGTCCGTCC 60.671 63.158 0.61 0.00 0.00 4.79
1231 3916 0.180171 TCGGCACCACCATCATTAGG 59.820 55.000 0.00 0.00 39.03 2.69
1236 3921 0.180406 ACCACCATCATTAGGTCGGC 59.820 55.000 0.00 0.00 37.23 5.54
1424 4109 1.871080 CCGGGAAATCAATCGAGGAG 58.129 55.000 0.00 0.00 0.00 3.69
1451 4137 1.852067 CGGTAGCTGGCTTTGCGTTT 61.852 55.000 0.00 0.00 35.28 3.60
1510 4196 0.762418 TATGGGAATCGCCATTCGGT 59.238 50.000 8.22 0.00 39.64 4.69
1511 4197 0.819259 ATGGGAATCGCCATTCGGTG 60.819 55.000 0.00 0.00 44.83 4.94
1528 4214 4.683832 TCGGTGGTTTGGTTGTAAATTTG 58.316 39.130 0.00 0.00 0.00 2.32
1536 4222 5.957842 TTGGTTGTAAATTTGATCGCTCT 57.042 34.783 0.00 0.00 0.00 4.09
1537 4223 7.302524 GTTTGGTTGTAAATTTGATCGCTCTA 58.697 34.615 0.00 0.00 0.00 2.43
1549 4235 5.447624 TGATCGCTCTATTACGGATTTCA 57.552 39.130 0.00 0.00 0.00 2.69
1575 4261 2.092914 CCTGGGTGGGATTACAGAGAAC 60.093 54.545 0.00 0.00 32.86 3.01
1655 4346 5.073965 ACAAAACTTGAGTAATACCCTCCCA 59.926 40.000 0.00 0.00 0.00 4.37
1691 4388 7.225784 AGGAGCACTCTATTATGTATGTCTG 57.774 40.000 0.00 0.00 0.00 3.51
1810 4515 4.841443 TTGTGTAGCGTATATCGTGGAT 57.159 40.909 0.00 0.00 42.13 3.41
1836 4541 7.039882 CAGAAGGGTTATAACATCGTGTAAGT 58.960 38.462 17.16 0.00 0.00 2.24
1846 4567 5.654603 ACATCGTGTAAGTAATCTCACCA 57.345 39.130 0.00 0.00 0.00 4.17
1847 4568 6.222038 ACATCGTGTAAGTAATCTCACCAT 57.778 37.500 0.00 0.00 0.00 3.55
1864 4585 6.155049 TCTCACCATCTATCTTTGATGTCACA 59.845 38.462 0.00 0.00 39.54 3.58
1885 4606 0.238553 GAGCCAAAAGGAAGCGACAC 59.761 55.000 0.00 0.00 0.00 3.67
1889 4610 1.068333 CCAAAAGGAAGCGACACCATG 60.068 52.381 0.00 0.00 0.00 3.66
1914 4635 4.744137 GTGCTTGTTATGTTGCAATCACAA 59.256 37.500 0.59 8.71 39.82 3.33
1925 4646 6.437928 TGTTGCAATCACAATCTTCTGTTAC 58.562 36.000 0.59 0.00 0.00 2.50
1928 4649 4.326205 CAATCACAATCTTCTGTTACGCG 58.674 43.478 3.53 3.53 0.00 6.01
2065 4786 2.222027 CAAGTCAAAGTGAGTGGTCCC 58.778 52.381 0.00 0.00 28.97 4.46
2112 4833 9.045223 CGTATCTATTGATGGATCAGACAAAAA 57.955 33.333 0.00 0.00 38.19 1.94
2356 5077 9.131791 TCATTAGTGCTTGTATCTAGACATGTA 57.868 33.333 0.00 0.00 0.00 2.29
2490 5211 6.778834 TCCATTTCTATGCATTCATTGTGT 57.221 33.333 3.54 0.00 34.22 3.72
2500 5221 7.696755 TATGCATTCATTGTGTATCAACACTC 58.303 34.615 3.54 0.00 43.51 3.51
2690 5423 2.037251 CCTTTTTCCGACTCCACTCTCA 59.963 50.000 0.00 0.00 0.00 3.27
2910 5643 2.604914 GGTCATCATGTGCTACAACTCG 59.395 50.000 0.00 0.00 0.00 4.18
2935 5668 1.141185 AGTGGATTAGCTTAGCCCCC 58.859 55.000 4.29 0.00 0.00 5.40
2955 5688 4.080015 CCCCTCATACCACATTTTGTAGGA 60.080 45.833 0.00 0.00 0.00 2.94
2958 5691 5.354234 CCTCATACCACATTTTGTAGGACAC 59.646 44.000 0.00 0.00 0.00 3.67
3074 5807 4.799564 TGTTGAGCAGAAACCAAAAGTT 57.200 36.364 0.00 0.00 41.81 2.66
3292 6058 5.422214 TGGATTACTTTCTCCTGGAGTTC 57.578 43.478 22.50 9.47 32.47 3.01
3308 6074 6.936335 CCTGGAGTTCCTAAATGCAAATTTTT 59.064 34.615 0.00 0.00 36.82 1.94
3679 6446 6.347696 TCAAAAACCTTCATTTGAGCAACAT 58.652 32.000 0.00 0.00 39.81 2.71
4098 7247 7.383102 TCTTCTGCTGATAACCTTGATTTTC 57.617 36.000 0.00 0.00 0.00 2.29
4322 7471 4.647564 AGAACCAGTGTCATCTTCCAAT 57.352 40.909 0.00 0.00 0.00 3.16
4325 7474 4.581309 ACCAGTGTCATCTTCCAATGAT 57.419 40.909 0.00 0.00 37.93 2.45
4632 7781 1.669115 GCAGCGTCTTCAGCTCCAA 60.669 57.895 0.00 0.00 44.06 3.53
4715 7864 5.314529 AGCACTCCTCGCACTACTTATATA 58.685 41.667 0.00 0.00 0.00 0.86
4901 8050 0.116940 ATGCACCCCAAATGGTTCCT 59.883 50.000 0.00 0.00 36.12 3.36
4934 8083 0.041090 AAATGGTTCCCGGGAATGCT 59.959 50.000 37.57 21.73 36.45 3.79
5065 8214 3.156714 TGGTGTCGCCAAGGTGAT 58.843 55.556 1.56 0.00 45.94 3.06
5080 8229 5.066893 CCAAGGTGATGACTTGTGGATAATG 59.933 44.000 0.00 0.00 42.84 1.90
5095 8246 6.256975 TGTGGATAATGTTTAGATACGTGCAC 59.743 38.462 6.82 6.82 0.00 4.57
5101 8252 4.163552 TGTTTAGATACGTGCACTCGAAG 58.836 43.478 16.19 0.68 34.70 3.79
5135 8286 9.985730 ATATTGATTGTTTCATCTCTCTCTCTC 57.014 33.333 0.00 0.00 33.34 3.20
5137 8288 7.099266 TGATTGTTTCATCTCTCTCTCTCTC 57.901 40.000 0.00 0.00 0.00 3.20
5138 8289 6.891361 TGATTGTTTCATCTCTCTCTCTCTCT 59.109 38.462 0.00 0.00 0.00 3.10
5188 8339 5.053978 ACAATCAGGACTTCTTTTCTGGT 57.946 39.130 0.00 0.00 0.00 4.00
5208 8359 0.028374 AACTTCGGTTTTGGTTCGCG 59.972 50.000 0.00 0.00 33.96 5.87
5209 8360 1.082366 CTTCGGTTTTGGTTCGCGG 60.082 57.895 6.13 0.00 0.00 6.46
5229 8380 4.142534 GCGGGGGTAAGTTTTGTTATCTTC 60.143 45.833 0.00 0.00 0.00 2.87
5268 8419 1.049289 AGCAATACTCCCTCCGTCCC 61.049 60.000 0.00 0.00 0.00 4.46
5269 8420 1.335132 GCAATACTCCCTCCGTCCCA 61.335 60.000 0.00 0.00 0.00 4.37
5293 8444 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
5336 8487 9.944663 TGTGCTAAAGTTAAGACACTTATTTTG 57.055 29.630 0.00 0.00 35.87 2.44
5360 8511 4.019141 AGACGGAGGGAGTACTAGATATGG 60.019 50.000 0.00 0.00 0.00 2.74
5544 8695 2.537625 GGAATGTTCTCGAAGCGATGAG 59.462 50.000 0.00 0.00 34.61 2.90
5602 8757 1.587547 GGCGCAGATTTAGGGAGAAG 58.412 55.000 10.83 0.00 0.00 2.85
5603 8758 1.134371 GGCGCAGATTTAGGGAGAAGT 60.134 52.381 10.83 0.00 0.00 3.01
5605 8760 2.352960 GCGCAGATTTAGGGAGAAGTTG 59.647 50.000 0.30 0.00 0.00 3.16
5737 8892 4.744570 TGTTTCCTACAGCTGAATAGTCG 58.255 43.478 23.35 1.22 31.68 4.18
5815 8987 3.265737 TCAGGGTGTAGTTGCAATACCAT 59.734 43.478 19.77 13.70 33.10 3.55
5818 8990 5.239306 CAGGGTGTAGTTGCAATACCATATG 59.761 44.000 19.77 13.72 33.10 1.78
5855 9027 9.953697 TGTATTGTACGCCAATAATTTTATTCC 57.046 29.630 9.06 0.00 45.28 3.01
5944 9123 3.096092 TGGTATCCTTTGATGGGTTTGC 58.904 45.455 0.00 0.00 32.18 3.68
5971 9150 6.701340 AGTTATTGCACATCTAAGTGACTCA 58.299 36.000 0.00 0.00 42.05 3.41
5972 9151 7.161404 AGTTATTGCACATCTAAGTGACTCAA 58.839 34.615 0.00 0.00 42.05 3.02
5977 9156 5.640783 TGCACATCTAAGTGACTCAATCAAG 59.359 40.000 0.00 0.00 42.05 3.02
5987 9166 7.375106 AGTGACTCAATCAAGCATAAAAGAG 57.625 36.000 0.00 0.00 39.72 2.85
6052 9239 9.606631 GATCAATGACATAAGAAGTACTTCCTT 57.393 33.333 28.05 22.33 40.33 3.36
6091 9302 9.825972 AGTTTGAAACGATCTTATATTGTGTTG 57.174 29.630 1.97 0.00 36.23 3.33
6092 9303 9.607285 GTTTGAAACGATCTTATATTGTGTTGT 57.393 29.630 0.00 0.00 0.00 3.32
6093 9304 9.605955 TTTGAAACGATCTTATATTGTGTTGTG 57.394 29.630 0.00 0.00 0.00 3.33
6094 9305 7.747888 TGAAACGATCTTATATTGTGTTGTGG 58.252 34.615 0.00 0.00 0.00 4.17
6095 9306 6.677781 AACGATCTTATATTGTGTTGTGGG 57.322 37.500 0.00 0.00 0.00 4.61
6096 9307 5.984725 ACGATCTTATATTGTGTTGTGGGA 58.015 37.500 0.00 0.00 0.00 4.37
6097 9308 6.591935 ACGATCTTATATTGTGTTGTGGGAT 58.408 36.000 0.00 0.00 0.00 3.85
6098 9309 6.483307 ACGATCTTATATTGTGTTGTGGGATG 59.517 38.462 0.00 0.00 0.00 3.51
6099 9310 6.073058 CGATCTTATATTGTGTTGTGGGATGG 60.073 42.308 0.00 0.00 0.00 3.51
6100 9311 6.320434 TCTTATATTGTGTTGTGGGATGGA 57.680 37.500 0.00 0.00 0.00 3.41
6101 9312 6.356556 TCTTATATTGTGTTGTGGGATGGAG 58.643 40.000 0.00 0.00 0.00 3.86
6102 9313 2.220653 ATTGTGTTGTGGGATGGAGG 57.779 50.000 0.00 0.00 0.00 4.30
6103 9314 0.112218 TTGTGTTGTGGGATGGAGGG 59.888 55.000 0.00 0.00 0.00 4.30
6104 9315 0.770166 TGTGTTGTGGGATGGAGGGA 60.770 55.000 0.00 0.00 0.00 4.20
6105 9316 0.035056 GTGTTGTGGGATGGAGGGAG 60.035 60.000 0.00 0.00 0.00 4.30
6106 9317 0.475632 TGTTGTGGGATGGAGGGAGT 60.476 55.000 0.00 0.00 0.00 3.85
6107 9318 1.203376 TGTTGTGGGATGGAGGGAGTA 60.203 52.381 0.00 0.00 0.00 2.59
6108 9319 1.486726 GTTGTGGGATGGAGGGAGTAG 59.513 57.143 0.00 0.00 0.00 2.57
6109 9320 0.031111 TGTGGGATGGAGGGAGTAGG 60.031 60.000 0.00 0.00 0.00 3.18
6110 9321 0.264955 GTGGGATGGAGGGAGTAGGA 59.735 60.000 0.00 0.00 0.00 2.94
6111 9322 1.132689 GTGGGATGGAGGGAGTAGGAT 60.133 57.143 0.00 0.00 0.00 3.24
6112 9323 2.111972 GTGGGATGGAGGGAGTAGGATA 59.888 54.545 0.00 0.00 0.00 2.59
6113 9324 3.011348 TGGGATGGAGGGAGTAGGATAT 58.989 50.000 0.00 0.00 0.00 1.63
6114 9325 3.246130 TGGGATGGAGGGAGTAGGATATG 60.246 52.174 0.00 0.00 0.00 1.78
6115 9326 3.246167 GGGATGGAGGGAGTAGGATATGT 60.246 52.174 0.00 0.00 0.00 2.29
6116 9327 3.772025 GGATGGAGGGAGTAGGATATGTG 59.228 52.174 0.00 0.00 0.00 3.21
6117 9328 3.260269 TGGAGGGAGTAGGATATGTGG 57.740 52.381 0.00 0.00 0.00 4.17
6118 9329 2.522705 TGGAGGGAGTAGGATATGTGGT 59.477 50.000 0.00 0.00 0.00 4.16
6119 9330 3.730594 TGGAGGGAGTAGGATATGTGGTA 59.269 47.826 0.00 0.00 0.00 3.25
6120 9331 4.171243 TGGAGGGAGTAGGATATGTGGTAA 59.829 45.833 0.00 0.00 0.00 2.85
6121 9332 4.527427 GGAGGGAGTAGGATATGTGGTAAC 59.473 50.000 0.00 0.00 0.00 2.50
6157 9368 6.773976 AACTTATATTGTGTTGTGGGATGG 57.226 37.500 0.00 0.00 0.00 3.51
6158 9369 6.073447 ACTTATATTGTGTTGTGGGATGGA 57.927 37.500 0.00 0.00 0.00 3.41
6159 9370 6.122277 ACTTATATTGTGTTGTGGGATGGAG 58.878 40.000 0.00 0.00 0.00 3.86
6160 9371 2.220653 ATTGTGTTGTGGGATGGAGG 57.779 50.000 0.00 0.00 0.00 4.30
6161 9372 0.112218 TTGTGTTGTGGGATGGAGGG 59.888 55.000 0.00 0.00 0.00 4.30
6162 9373 0.770166 TGTGTTGTGGGATGGAGGGA 60.770 55.000 0.00 0.00 0.00 4.20
6163 9374 0.035056 GTGTTGTGGGATGGAGGGAG 60.035 60.000 0.00 0.00 0.00 4.30
6164 9375 0.475632 TGTTGTGGGATGGAGGGAGT 60.476 55.000 0.00 0.00 0.00 3.85
6165 9376 1.203376 TGTTGTGGGATGGAGGGAGTA 60.203 52.381 0.00 0.00 0.00 2.59
6166 9377 1.486726 GTTGTGGGATGGAGGGAGTAG 59.513 57.143 0.00 0.00 0.00 2.57
6167 9378 0.031111 TGTGGGATGGAGGGAGTAGG 60.031 60.000 0.00 0.00 0.00 3.18
6168 9379 0.264955 GTGGGATGGAGGGAGTAGGA 59.735 60.000 0.00 0.00 0.00 2.94
6169 9380 1.132689 GTGGGATGGAGGGAGTAGGAT 60.133 57.143 0.00 0.00 0.00 3.24
6170 9381 2.111972 GTGGGATGGAGGGAGTAGGATA 59.888 54.545 0.00 0.00 0.00 2.59
6171 9382 3.011348 TGGGATGGAGGGAGTAGGATAT 58.989 50.000 0.00 0.00 0.00 1.63
6172 9383 3.246130 TGGGATGGAGGGAGTAGGATATG 60.246 52.174 0.00 0.00 0.00 1.78
6173 9384 3.246167 GGGATGGAGGGAGTAGGATATGT 60.246 52.174 0.00 0.00 0.00 2.29
6174 9385 3.772025 GGATGGAGGGAGTAGGATATGTG 59.228 52.174 0.00 0.00 0.00 3.21
6175 9386 3.260269 TGGAGGGAGTAGGATATGTGG 57.740 52.381 0.00 0.00 0.00 4.17
6176 9387 2.522705 TGGAGGGAGTAGGATATGTGGT 59.477 50.000 0.00 0.00 0.00 4.16
6177 9388 3.730594 TGGAGGGAGTAGGATATGTGGTA 59.269 47.826 0.00 0.00 0.00 3.25
6178 9389 4.171243 TGGAGGGAGTAGGATATGTGGTAA 59.829 45.833 0.00 0.00 0.00 2.85
6179 9390 4.527427 GGAGGGAGTAGGATATGTGGTAAC 59.473 50.000 0.00 0.00 0.00 2.50
6213 9424 5.982890 AAACTTGTATTGTTGGGATGGAG 57.017 39.130 0.00 0.00 0.00 3.86
6238 9449 6.758886 GGGAGTAGCATATGTGATAACATAGC 59.241 42.308 8.88 11.32 36.21 2.97
6308 9521 6.267471 TCCTTCCGTCCTTAAAAGTGTACTTA 59.733 38.462 0.00 0.00 34.61 2.24
6309 9522 6.367149 CCTTCCGTCCTTAAAAGTGTACTTAC 59.633 42.308 0.00 0.00 34.61 2.34
6329 9542 8.474006 ACTTACAATTTTGTTGGAAAGTCAAC 57.526 30.769 0.63 0.00 45.13 3.18
6330 9543 8.311109 ACTTACAATTTTGTTGGAAAGTCAACT 58.689 29.630 0.63 0.00 45.15 3.16
6334 9547 8.503196 ACAATTTTGTTGGAAAGTCAACTTTTC 58.497 29.630 9.37 8.12 45.15 2.29
6335 9548 8.502387 CAATTTTGTTGGAAAGTCAACTTTTCA 58.498 29.630 11.71 11.71 46.61 2.69
6382 9595 8.072321 ACAATAATACACCAACATTTATGCCA 57.928 30.769 0.00 0.00 0.00 4.92
6383 9596 8.703743 ACAATAATACACCAACATTTATGCCAT 58.296 29.630 0.00 0.00 0.00 4.40
6384 9597 9.195411 CAATAATACACCAACATTTATGCCATC 57.805 33.333 0.00 0.00 0.00 3.51
6385 9598 6.788598 AATACACCAACATTTATGCCATCA 57.211 33.333 0.00 0.00 0.00 3.07
6386 9599 6.788598 ATACACCAACATTTATGCCATCAA 57.211 33.333 0.00 0.00 0.00 2.57
6387 9600 5.480642 ACACCAACATTTATGCCATCAAA 57.519 34.783 0.00 0.00 0.00 2.69
6388 9601 6.052405 ACACCAACATTTATGCCATCAAAT 57.948 33.333 0.00 0.00 0.00 2.32
6389 9602 6.474630 ACACCAACATTTATGCCATCAAATT 58.525 32.000 0.00 0.00 0.00 1.82
6390 9603 6.372103 ACACCAACATTTATGCCATCAAATTG 59.628 34.615 0.00 0.00 0.00 2.32
6391 9604 6.594547 CACCAACATTTATGCCATCAAATTGA 59.405 34.615 0.00 0.00 0.00 2.57
6392 9605 6.819649 ACCAACATTTATGCCATCAAATTGAG 59.180 34.615 1.10 0.00 0.00 3.02
6393 9606 6.259167 CCAACATTTATGCCATCAAATTGAGG 59.741 38.462 1.10 0.55 0.00 3.86
6399 9612 0.462789 CCATCAAATTGAGGGCAGGC 59.537 55.000 13.96 0.00 41.71 4.85
6400 9613 0.462789 CATCAAATTGAGGGCAGGCC 59.537 55.000 4.33 4.33 0.00 5.19
6401 9614 0.337428 ATCAAATTGAGGGCAGGCCT 59.663 50.000 17.36 17.36 36.10 5.19
6402 9615 0.612732 TCAAATTGAGGGCAGGCCTG 60.613 55.000 29.34 29.34 36.10 4.85
6403 9616 1.305549 AAATTGAGGGCAGGCCTGG 60.306 57.895 33.46 15.81 36.10 4.45
6416 9629 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
6417 9630 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
6418 9631 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
6419 9632 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
6420 9633 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
6421 9634 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
6422 9635 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
6423 9636 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
6424 9637 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
6425 9638 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
6426 9639 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
6427 9640 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
6428 9641 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
6429 9642 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
6430 9643 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
6431 9644 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
6432 9645 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
6433 9646 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
6434 9647 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
6435 9648 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
6436 9649 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
6437 9650 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
6438 9651 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
6439 9652 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
6440 9653 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
6441 9654 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
6442 9655 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
6443 9656 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
6444 9657 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
6445 9658 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
6446 9659 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
6447 9660 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
6448 9661 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
6449 9662 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
6450 9663 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
6451 9664 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
6452 9665 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
6453 9666 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
6464 9677 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
6465 9678 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
6466 9679 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
6467 9680 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
6468 9681 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
6469 9682 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
6470 9683 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
6471 9684 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
6472 9685 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
6473 9686 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
6474 9687 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
6475 9688 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
6476 9689 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
6477 9690 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
6491 9704 5.975410 GCACTTTGCATAGGTAAGACTAG 57.025 43.478 9.08 0.00 44.26 2.57
6492 9705 4.811557 GCACTTTGCATAGGTAAGACTAGG 59.188 45.833 9.08 0.00 44.26 3.02
6493 9706 5.627040 GCACTTTGCATAGGTAAGACTAGGT 60.627 44.000 9.08 0.00 44.26 3.08
6494 9707 6.407202 CACTTTGCATAGGTAAGACTAGGTT 58.593 40.000 9.08 0.00 0.00 3.50
6495 9708 6.535508 CACTTTGCATAGGTAAGACTAGGTTC 59.464 42.308 9.08 0.00 0.00 3.62
6496 9709 5.609533 TTGCATAGGTAAGACTAGGTTCC 57.390 43.478 0.00 0.00 0.00 3.62
6497 9710 4.880164 TGCATAGGTAAGACTAGGTTCCT 58.120 43.478 0.00 0.00 0.00 3.36
6498 9711 6.022107 TGCATAGGTAAGACTAGGTTCCTA 57.978 41.667 0.00 0.00 33.10 2.94
6499 9712 6.621394 TGCATAGGTAAGACTAGGTTCCTAT 58.379 40.000 0.00 2.09 38.35 2.57
6500 9713 7.762610 TGCATAGGTAAGACTAGGTTCCTATA 58.237 38.462 11.18 0.00 36.51 1.31
6501 9714 8.229605 TGCATAGGTAAGACTAGGTTCCTATAA 58.770 37.037 11.18 4.48 36.51 0.98
6502 9715 9.257428 GCATAGGTAAGACTAGGTTCCTATAAT 57.743 37.037 11.18 0.00 36.51 1.28
6504 9717 9.994017 ATAGGTAAGACTAGGTTCCTATAATCC 57.006 37.037 10.36 0.00 36.77 3.01
6505 9718 7.247500 AGGTAAGACTAGGTTCCTATAATCCC 58.753 42.308 0.00 0.00 0.00 3.85
6506 9719 7.076566 AGGTAAGACTAGGTTCCTATAATCCCT 59.923 40.741 0.00 0.00 0.00 4.20
6507 9720 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
6508 9721 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
6509 9722 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
6510 9723 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
6511 9724 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
6512 9725 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
6513 9726 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
6514 9727 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
6515 9728 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
6516 9729 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
6517 9730 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
6518 9731 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
6519 9732 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
6521 9734 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
6522 9735 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
6523 9736 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
6524 9737 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
6525 9738 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
6526 9739 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
6527 9740 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
6534 9747 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
6535 9748 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
6536 9749 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
6537 9750 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
6538 9751 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
6539 9752 2.644798 ACCTTGTGTGGGAGCTTCTATT 59.355 45.455 0.00 0.00 0.00 1.73
6540 9753 3.274288 CCTTGTGTGGGAGCTTCTATTC 58.726 50.000 0.00 0.00 0.00 1.75
6541 9754 2.672961 TGTGTGGGAGCTTCTATTCG 57.327 50.000 0.00 0.00 0.00 3.34
6542 9755 1.291132 GTGTGGGAGCTTCTATTCGC 58.709 55.000 0.00 0.00 0.00 4.70
6543 9756 1.134670 GTGTGGGAGCTTCTATTCGCT 60.135 52.381 0.00 0.00 39.61 4.93
6544 9757 1.134699 TGTGGGAGCTTCTATTCGCTG 60.135 52.381 0.00 0.00 36.45 5.18
6545 9758 0.465705 TGGGAGCTTCTATTCGCTGG 59.534 55.000 0.00 0.00 36.45 4.85
6546 9759 0.250081 GGGAGCTTCTATTCGCTGGG 60.250 60.000 0.00 0.00 36.45 4.45
6547 9760 0.466124 GGAGCTTCTATTCGCTGGGT 59.534 55.000 0.00 0.00 36.45 4.51
6548 9761 1.539280 GGAGCTTCTATTCGCTGGGTC 60.539 57.143 0.00 0.00 36.45 4.46
6549 9762 1.410882 GAGCTTCTATTCGCTGGGTCT 59.589 52.381 0.00 0.00 36.45 3.85
6550 9763 1.137872 AGCTTCTATTCGCTGGGTCTG 59.862 52.381 0.00 0.00 34.69 3.51
6551 9764 1.134670 GCTTCTATTCGCTGGGTCTGT 60.135 52.381 0.00 0.00 0.00 3.41
6552 9765 2.815478 CTTCTATTCGCTGGGTCTGTC 58.185 52.381 0.00 0.00 0.00 3.51
6553 9766 1.112113 TCTATTCGCTGGGTCTGTCC 58.888 55.000 0.00 0.00 0.00 4.02
6554 9767 1.115467 CTATTCGCTGGGTCTGTCCT 58.885 55.000 0.00 0.00 36.25 3.85
6555 9768 1.482593 CTATTCGCTGGGTCTGTCCTT 59.517 52.381 0.00 0.00 36.25 3.36
6556 9769 0.693049 ATTCGCTGGGTCTGTCCTTT 59.307 50.000 0.00 0.00 36.25 3.11
6590 9803 6.662414 TCAAATTAGTAGAGTTTGATGGCG 57.338 37.500 0.00 0.00 37.05 5.69
6591 9804 6.170506 TCAAATTAGTAGAGTTTGATGGCGT 58.829 36.000 0.00 0.00 37.05 5.68
6592 9805 6.092122 TCAAATTAGTAGAGTTTGATGGCGTG 59.908 38.462 0.00 0.00 37.05 5.34
6593 9806 4.530710 TTAGTAGAGTTTGATGGCGTGT 57.469 40.909 0.00 0.00 0.00 4.49
6594 9807 2.960819 AGTAGAGTTTGATGGCGTGTC 58.039 47.619 0.00 0.00 0.00 3.67
6595 9808 2.000447 GTAGAGTTTGATGGCGTGTCC 59.000 52.381 0.00 0.00 0.00 4.02
6596 9809 0.670546 AGAGTTTGATGGCGTGTCCG 60.671 55.000 0.00 0.00 37.80 4.79
6597 9810 0.669318 GAGTTTGATGGCGTGTCCGA 60.669 55.000 0.00 0.00 37.80 4.55
6619 9832 2.161855 GTGTTGCCATGGTCTGATTCA 58.838 47.619 14.67 0.00 0.00 2.57
6620 9833 2.756760 GTGTTGCCATGGTCTGATTCAT 59.243 45.455 14.67 0.00 0.00 2.57
6622 9835 3.444742 TGTTGCCATGGTCTGATTCATTC 59.555 43.478 14.67 0.00 0.00 2.67
6634 9847 5.739161 GTCTGATTCATTCAACGTTAATGGC 59.261 40.000 20.44 14.44 35.48 4.40
6661 9874 2.747855 GGCGAGCCACCTTGAAGG 60.748 66.667 10.24 10.24 42.49 3.46
6693 9906 1.734465 GCATATCAGTAATGGAGCCGC 59.266 52.381 0.00 0.00 0.00 6.53
6694 9907 2.871637 GCATATCAGTAATGGAGCCGCA 60.872 50.000 0.00 0.00 0.00 5.69
6697 9910 0.829990 TCAGTAATGGAGCCGCATCA 59.170 50.000 0.00 0.00 0.00 3.07
6699 9912 2.016318 CAGTAATGGAGCCGCATCAAA 58.984 47.619 0.00 0.00 0.00 2.69
6701 9914 3.814842 CAGTAATGGAGCCGCATCAAATA 59.185 43.478 0.00 0.00 0.00 1.40
6702 9915 4.275689 CAGTAATGGAGCCGCATCAAATAA 59.724 41.667 0.00 0.00 0.00 1.40
6713 9926 3.432186 CGCATCAAATAAGGGTGAGGAGA 60.432 47.826 0.00 0.00 28.47 3.71
6735 9948 7.649306 GGAGATGATCCGTCATTTTTATTTTGG 59.351 37.037 0.00 0.00 44.96 3.28
6738 9951 6.393990 TGATCCGTCATTTTTATTTTGGTGG 58.606 36.000 0.00 0.00 0.00 4.61
6745 9958 8.024285 CGTCATTTTTATTTTGGTGGCTACTAA 58.976 33.333 0.00 0.00 0.00 2.24
6751 9964 1.737199 TTGGTGGCTACTAAGGTGGT 58.263 50.000 0.00 0.00 0.00 4.16
6753 9966 1.272807 GGTGGCTACTAAGGTGGTGA 58.727 55.000 0.00 0.00 0.00 4.02
6756 9969 2.038033 GTGGCTACTAAGGTGGTGACAA 59.962 50.000 0.00 0.00 46.06 3.18
6760 9973 3.244457 GCTACTAAGGTGGTGACAAAGGT 60.244 47.826 0.00 0.00 46.06 3.50
6776 9989 2.918712 AGGTGGTGTCAAGTTCAGAG 57.081 50.000 0.00 0.00 0.00 3.35
6777 9990 1.417890 AGGTGGTGTCAAGTTCAGAGG 59.582 52.381 0.00 0.00 0.00 3.69
6778 9991 1.416401 GGTGGTGTCAAGTTCAGAGGA 59.584 52.381 0.00 0.00 0.00 3.71
6779 9992 2.039084 GGTGGTGTCAAGTTCAGAGGAT 59.961 50.000 0.00 0.00 0.00 3.24
6780 9993 3.496870 GGTGGTGTCAAGTTCAGAGGATT 60.497 47.826 0.00 0.00 0.00 3.01
6781 9994 3.748568 GTGGTGTCAAGTTCAGAGGATTC 59.251 47.826 0.00 0.00 0.00 2.52
6782 9995 3.648067 TGGTGTCAAGTTCAGAGGATTCT 59.352 43.478 0.00 0.00 0.00 2.40
6783 9996 4.103153 TGGTGTCAAGTTCAGAGGATTCTT 59.897 41.667 0.00 0.00 0.00 2.52
6784 9997 4.693095 GGTGTCAAGTTCAGAGGATTCTTC 59.307 45.833 0.00 0.00 0.00 2.87
6785 9998 5.300752 GTGTCAAGTTCAGAGGATTCTTCA 58.699 41.667 0.00 0.00 0.00 3.02
6786 9999 5.407995 GTGTCAAGTTCAGAGGATTCTTCAG 59.592 44.000 0.00 0.00 0.00 3.02
6787 10000 5.070981 TGTCAAGTTCAGAGGATTCTTCAGT 59.929 40.000 0.00 0.00 0.00 3.41
6788 10001 5.637387 GTCAAGTTCAGAGGATTCTTCAGTC 59.363 44.000 0.00 0.00 0.00 3.51
6789 10002 5.541868 TCAAGTTCAGAGGATTCTTCAGTCT 59.458 40.000 0.00 0.00 0.00 3.24
6790 10003 6.042552 TCAAGTTCAGAGGATTCTTCAGTCTT 59.957 38.462 0.00 0.00 0.00 3.01
6791 10004 5.792741 AGTTCAGAGGATTCTTCAGTCTTG 58.207 41.667 0.00 0.00 0.00 3.02
6792 10005 5.541868 AGTTCAGAGGATTCTTCAGTCTTGA 59.458 40.000 0.00 0.00 0.00 3.02
6793 10006 6.213195 AGTTCAGAGGATTCTTCAGTCTTGAT 59.787 38.462 0.00 0.00 32.27 2.57
6794 10007 6.617782 TCAGAGGATTCTTCAGTCTTGATT 57.382 37.500 0.00 0.00 32.27 2.57
6795 10008 6.404708 TCAGAGGATTCTTCAGTCTTGATTG 58.595 40.000 0.00 0.00 32.27 2.67
6796 10009 6.013898 TCAGAGGATTCTTCAGTCTTGATTGT 60.014 38.462 0.00 0.00 32.27 2.71
6797 10010 7.179160 TCAGAGGATTCTTCAGTCTTGATTGTA 59.821 37.037 0.00 0.00 32.27 2.41
6798 10011 7.986320 CAGAGGATTCTTCAGTCTTGATTGTAT 59.014 37.037 0.00 0.00 32.27 2.29
6799 10012 8.547173 AGAGGATTCTTCAGTCTTGATTGTATT 58.453 33.333 0.00 0.00 32.27 1.89
6800 10013 9.171877 GAGGATTCTTCAGTCTTGATTGTATTT 57.828 33.333 0.00 0.00 32.27 1.40
6801 10014 9.525826 AGGATTCTTCAGTCTTGATTGTATTTT 57.474 29.630 0.00 0.00 32.27 1.82
6805 10018 8.924511 TCTTCAGTCTTGATTGTATTTTTCCT 57.075 30.769 0.00 0.00 32.27 3.36
6806 10019 9.354673 TCTTCAGTCTTGATTGTATTTTTCCTT 57.645 29.630 0.00 0.00 32.27 3.36
6807 10020 9.971922 CTTCAGTCTTGATTGTATTTTTCCTTT 57.028 29.630 0.00 0.00 32.27 3.11
6811 10024 9.546428 AGTCTTGATTGTATTTTTCCTTTTTGG 57.454 29.630 0.00 0.00 37.10 3.28
6812 10025 8.282592 GTCTTGATTGTATTTTTCCTTTTTGGC 58.717 33.333 0.00 0.00 35.26 4.52
6813 10026 8.210265 TCTTGATTGTATTTTTCCTTTTTGGCT 58.790 29.630 0.00 0.00 35.26 4.75
6814 10027 7.727331 TGATTGTATTTTTCCTTTTTGGCTG 57.273 32.000 0.00 0.00 35.26 4.85
6815 10028 6.709846 TGATTGTATTTTTCCTTTTTGGCTGG 59.290 34.615 0.00 0.00 35.26 4.85
6816 10029 5.622346 TGTATTTTTCCTTTTTGGCTGGT 57.378 34.783 0.00 0.00 35.26 4.00
6817 10030 5.363939 TGTATTTTTCCTTTTTGGCTGGTG 58.636 37.500 0.00 0.00 35.26 4.17
6818 10031 2.323968 TTTTCCTTTTTGGCTGGTGC 57.676 45.000 0.00 0.00 38.76 5.01
6819 10032 1.494960 TTTCCTTTTTGGCTGGTGCT 58.505 45.000 0.00 0.00 39.59 4.40
6820 10033 1.039856 TTCCTTTTTGGCTGGTGCTC 58.960 50.000 0.00 0.00 39.59 4.26
6821 10034 0.827507 TCCTTTTTGGCTGGTGCTCC 60.828 55.000 0.00 0.00 39.59 4.70
6822 10035 0.829182 CCTTTTTGGCTGGTGCTCCT 60.829 55.000 6.34 0.00 39.59 3.69
6823 10036 1.043022 CTTTTTGGCTGGTGCTCCTT 58.957 50.000 6.34 0.00 39.59 3.36
6824 10037 1.413812 CTTTTTGGCTGGTGCTCCTTT 59.586 47.619 6.34 0.00 39.59 3.11
6825 10038 0.752054 TTTTGGCTGGTGCTCCTTTG 59.248 50.000 6.34 0.00 39.59 2.77
6826 10039 0.396974 TTTGGCTGGTGCTCCTTTGT 60.397 50.000 6.34 0.00 39.59 2.83
6827 10040 1.108727 TTGGCTGGTGCTCCTTTGTG 61.109 55.000 6.34 0.00 39.59 3.33
6828 10041 2.647297 GCTGGTGCTCCTTTGTGC 59.353 61.111 6.34 0.00 36.03 4.57
6829 10042 2.195567 GCTGGTGCTCCTTTGTGCA 61.196 57.895 6.34 0.00 38.57 4.57
6830 10043 1.737355 GCTGGTGCTCCTTTGTGCAA 61.737 55.000 6.34 0.00 42.14 4.08
6831 10044 0.746063 CTGGTGCTCCTTTGTGCAAA 59.254 50.000 6.34 0.00 42.14 3.68
6832 10045 0.746063 TGGTGCTCCTTTGTGCAAAG 59.254 50.000 15.53 15.53 45.47 2.77
6841 10054 3.308438 CTTTGTGCAAAGGCTAGCATT 57.692 42.857 18.24 13.85 43.44 3.56
6842 10055 3.656559 CTTTGTGCAAAGGCTAGCATTT 58.343 40.909 20.96 20.96 43.44 2.32
6843 10056 3.749665 TTGTGCAAAGGCTAGCATTTT 57.250 38.095 23.76 16.18 43.44 1.82
6844 10057 3.029320 TGTGCAAAGGCTAGCATTTTG 57.971 42.857 23.76 25.65 43.44 2.44
6871 10084 5.749596 TTTTTCAGTTGTCACATCGATGT 57.250 34.783 25.18 25.18 42.84 3.06
6881 10094 1.891178 ACATCGATGTGTACGTGACG 58.109 50.000 29.49 2.24 40.03 4.35
6882 10095 1.198408 ACATCGATGTGTACGTGACGT 59.802 47.619 29.49 17.03 40.83 4.34
6883 10096 1.577578 CATCGATGTGTACGTGACGTG 59.422 52.381 22.16 1.54 41.39 4.49
6884 10097 0.587768 TCGATGTGTACGTGACGTGT 59.412 50.000 22.16 0.00 41.39 4.49
6885 10098 1.797635 TCGATGTGTACGTGACGTGTA 59.202 47.619 22.16 6.46 41.39 2.90
6886 10099 2.159801 TCGATGTGTACGTGACGTGTAG 60.160 50.000 22.16 5.18 41.39 2.74
6887 10100 1.909532 GATGTGTACGTGACGTGTAGC 59.090 52.381 22.16 8.69 41.39 3.58
6888 10101 0.662085 TGTGTACGTGACGTGTAGCA 59.338 50.000 22.16 11.19 41.39 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 0.883833 GCACAAGCACTAGCACCATT 59.116 50.000 0.00 0.00 45.49 3.16
26 27 0.586319 GTTACGCAAGAGCACAAGCA 59.414 50.000 0.00 0.00 42.61 3.91
52 53 0.370273 GCTAAGTGATGGTGTTCGCG 59.630 55.000 0.00 0.00 0.00 5.87
55 56 2.027192 TCCAGGCTAAGTGATGGTGTTC 60.027 50.000 0.00 0.00 34.32 3.18
61 62 2.093973 ACGTTCTCCAGGCTAAGTGATG 60.094 50.000 0.00 0.00 0.00 3.07
62 63 2.180276 ACGTTCTCCAGGCTAAGTGAT 58.820 47.619 0.00 0.00 0.00 3.06
65 66 3.577415 ACTAAACGTTCTCCAGGCTAAGT 59.423 43.478 0.00 0.00 0.00 2.24
115 116 5.194432 TCCTTTAGTGGCAAGTTTGTTACA 58.806 37.500 0.00 0.00 0.00 2.41
146 147 6.047511 AGATATAATTAGCAGGGTGAGCAG 57.952 41.667 0.00 0.00 0.00 4.24
178 179 5.982465 GCACCTTTGCTGAAATAAAAACA 57.018 34.783 0.00 0.00 46.17 2.83
233 234 3.226346 TCTTGTTAAGGATGGTCGTCG 57.774 47.619 0.00 0.00 0.00 5.12
235 236 4.819105 TGATCTTGTTAAGGATGGTCGT 57.181 40.909 0.00 0.00 0.00 4.34
237 238 6.349363 GGTGTTTGATCTTGTTAAGGATGGTC 60.349 42.308 0.00 0.00 0.00 4.02
320 321 2.069273 CTTGCGACTCAAAAGGATCGT 58.931 47.619 0.00 0.00 36.93 3.73
325 326 4.749245 ATACAACTTGCGACTCAAAAGG 57.251 40.909 0.00 0.00 33.65 3.11
326 327 5.747565 TGAATACAACTTGCGACTCAAAAG 58.252 37.500 0.00 0.00 33.65 2.27
336 338 9.532697 CAAATAAAAGCAATGAATACAACTTGC 57.467 29.630 0.00 0.00 40.30 4.01
361 363 7.041644 GCACAGAGTTACAGTTTTACATAACCA 60.042 37.037 0.00 0.00 0.00 3.67
362 364 7.172703 AGCACAGAGTTACAGTTTTACATAACC 59.827 37.037 0.00 0.00 0.00 2.85
372 374 4.021894 CCAGAGTAGCACAGAGTTACAGTT 60.022 45.833 0.00 0.00 36.49 3.16
373 375 3.508012 CCAGAGTAGCACAGAGTTACAGT 59.492 47.826 0.00 0.00 36.49 3.55
376 378 2.417515 GGCCAGAGTAGCACAGAGTTAC 60.418 54.545 0.00 0.00 34.47 2.50
384 386 0.108138 AACATCGGCCAGAGTAGCAC 60.108 55.000 2.24 0.00 0.00 4.40
423 2802 2.936919 ACTGACACAAGAAGCATCCA 57.063 45.000 0.00 0.00 0.00 3.41
463 2844 4.480541 TGAATTATTGTTTTGCGTCGCAT 58.519 34.783 22.41 7.41 38.76 4.73
526 2907 9.420551 CTCGGTTTTTAGGATGTTAGTATATCC 57.579 37.037 6.03 6.03 41.15 2.59
539 2920 4.829872 TGCTTATCCTCGGTTTTTAGGA 57.170 40.909 0.00 0.00 45.76 2.94
572 2955 3.728221 CGTGATGATTTTTGAAACGTGCA 59.272 39.130 0.00 0.00 0.00 4.57
577 2960 7.144007 TCGTTTTCGTGATGATTTTTGAAAC 57.856 32.000 0.00 0.00 44.46 2.78
579 2962 6.720343 TCTCGTTTTCGTGATGATTTTTGAA 58.280 32.000 0.00 0.00 44.46 2.69
585 2968 4.755123 ACCTTTCTCGTTTTCGTGATGATT 59.245 37.500 0.00 0.00 43.54 2.57
594 2977 4.083961 GCCTAGTCAACCTTTCTCGTTTTC 60.084 45.833 0.00 0.00 0.00 2.29
603 2986 0.321653 CGCCTGCCTAGTCAACCTTT 60.322 55.000 0.00 0.00 0.00 3.11
607 2990 2.820037 GCCGCCTGCCTAGTCAAC 60.820 66.667 0.00 0.00 0.00 3.18
626 3023 2.377310 ACGAACATACACGCGCACC 61.377 57.895 5.73 0.00 0.00 5.01
634 3031 4.869861 CCATGAAGATGACACGAACATACA 59.130 41.667 0.00 0.00 0.00 2.29
637 3034 3.942829 ACCATGAAGATGACACGAACAT 58.057 40.909 0.00 0.00 0.00 2.71
640 3037 3.007940 AGGAACCATGAAGATGACACGAA 59.992 43.478 0.00 0.00 0.00 3.85
705 3106 3.562141 TGTAAACCACGTCAGTTGGAATG 59.438 43.478 1.43 0.00 0.00 2.67
771 3181 8.293867 CACGATTACAAACCAAGAAAGGAATAA 58.706 33.333 0.00 0.00 0.00 1.40
813 3223 0.621571 TGAGGGTCTGCTGGCCTAAT 60.622 55.000 14.40 0.55 0.00 1.73
854 3264 7.748683 TGTTCACGAGATTATATTTTTGTGTGC 59.251 33.333 0.00 0.00 0.00 4.57
1184 3869 3.047877 GGGAAACAGTGGCGACGG 61.048 66.667 0.00 0.00 0.00 4.79
1215 3900 1.299541 CGACCTAATGATGGTGGTGC 58.700 55.000 0.00 0.00 38.03 5.01
1404 4089 0.179056 TCCTCGATTGATTTCCCGGC 60.179 55.000 0.00 0.00 0.00 6.13
1411 4096 0.105039 GTCCGGCTCCTCGATTGATT 59.895 55.000 0.00 0.00 0.00 2.57
1412 4097 1.742768 GTCCGGCTCCTCGATTGAT 59.257 57.895 0.00 0.00 0.00 2.57
1413 4098 2.771639 CGTCCGGCTCCTCGATTGA 61.772 63.158 0.00 0.00 0.00 2.57
1414 4099 2.278857 CGTCCGGCTCCTCGATTG 60.279 66.667 0.00 0.00 0.00 2.67
1415 4100 4.208686 GCGTCCGGCTCCTCGATT 62.209 66.667 0.00 0.00 39.11 3.34
1436 4121 2.730094 CCAAACGCAAAGCCAGCT 59.270 55.556 0.00 0.00 0.00 4.24
1451 4137 4.056125 CGTCTGACGGAGCTGCCA 62.056 66.667 21.78 0.00 38.08 4.92
1510 4196 4.985409 GCGATCAAATTTACAACCAAACCA 59.015 37.500 0.00 0.00 0.00 3.67
1511 4197 5.227152 AGCGATCAAATTTACAACCAAACC 58.773 37.500 0.00 0.00 0.00 3.27
1528 4214 5.462405 ACTGAAATCCGTAATAGAGCGATC 58.538 41.667 0.00 0.00 0.00 3.69
1549 4235 1.080498 TGTAATCCCACCCAGGAGACT 59.920 52.381 0.00 0.00 39.95 3.24
1593 4279 3.493877 CAGCAGATACTATGAAGCAGCAC 59.506 47.826 0.00 0.00 0.00 4.40
1691 4388 2.015587 ACTAGAGTGCTACTACACCGC 58.984 52.381 0.00 0.00 41.67 5.68
1736 4441 4.371786 TGATTGGAATCTACGTCATGCTC 58.628 43.478 0.00 0.00 36.39 4.26
1810 4515 5.670792 ACACGATGTTATAACCCTTCTGA 57.329 39.130 13.01 0.00 0.00 3.27
1836 4541 8.927411 TGACATCAAAGATAGATGGTGAGATTA 58.073 33.333 7.92 0.00 45.49 1.75
1846 4567 5.996513 GGCTCATGTGACATCAAAGATAGAT 59.003 40.000 0.00 0.00 0.00 1.98
1847 4568 5.104817 TGGCTCATGTGACATCAAAGATAGA 60.105 40.000 0.00 0.00 0.00 1.98
1864 4585 1.168714 GTCGCTTCCTTTTGGCTCAT 58.831 50.000 0.00 0.00 40.12 2.90
1885 4606 2.988493 GCAACATAACAAGCACACATGG 59.012 45.455 0.00 0.00 0.00 3.66
1889 4610 4.297510 TGATTGCAACATAACAAGCACAC 58.702 39.130 0.00 0.00 37.27 3.82
1914 4635 4.164294 GAGTAACACGCGTAACAGAAGAT 58.836 43.478 13.44 0.00 0.00 2.40
1925 4646 2.717595 CGACAAACATGAGTAACACGCG 60.718 50.000 3.53 3.53 0.00 6.01
1928 4649 2.220133 ACGCGACAAACATGAGTAACAC 59.780 45.455 15.93 0.00 0.00 3.32
2065 4786 6.042144 ACGTTAAAAACAACCAATTGCATG 57.958 33.333 0.00 3.58 39.66 4.06
2112 4833 9.140286 CGATGTCAAATCTATCGGTAACATAAT 57.860 33.333 0.00 0.00 39.82 1.28
2234 4955 8.403236 CACAAGGTAAGGCATAAAATAACTACC 58.597 37.037 0.00 0.00 0.00 3.18
2356 5077 3.213206 TCTCCACAGATTGCAGTTGTT 57.787 42.857 0.00 0.00 0.00 2.83
2490 5211 6.175471 AGAATTGTGAGCATGAGTGTTGATA 58.825 36.000 0.00 0.00 0.00 2.15
2690 5423 1.954382 GAAGGACAAAGCTTTTCCGGT 59.046 47.619 23.19 18.47 34.31 5.28
2756 5489 1.072965 AGTTCTTCACCTCAAGCCAGG 59.927 52.381 0.00 0.00 39.80 4.45
2910 5643 3.628032 GGCTAAGCTAATCCACTGAAACC 59.372 47.826 0.00 0.00 0.00 3.27
2935 5668 6.173339 AGTGTCCTACAAAATGTGGTATGAG 58.827 40.000 0.00 0.00 0.00 2.90
3074 5807 8.826765 AGAATTGAATTCTCTCCTGGTAAGTAA 58.173 33.333 14.34 0.00 46.17 2.24
3105 5867 9.565090 CAAGATGATAGGAAGGAAACATATGAA 57.435 33.333 10.38 0.00 0.00 2.57
3116 5878 6.723298 ACAGTAGACAAGATGATAGGAAGG 57.277 41.667 0.00 0.00 0.00 3.46
3279 6045 3.587061 TGCATTTAGGAACTCCAGGAGAA 59.413 43.478 24.45 5.96 41.75 2.87
3528 6295 9.521841 TCTTGTCCTCGTATCTATATTTCAGAT 57.478 33.333 0.00 0.00 36.68 2.90
3679 6446 0.391228 TAGCAGCTGGTGAAACACGA 59.609 50.000 28.10 2.34 39.98 4.35
3887 6655 5.815581 ACTTGCAACAGATAATAACCCTGA 58.184 37.500 0.00 0.00 0.00 3.86
3888 6656 6.515272 AACTTGCAACAGATAATAACCCTG 57.485 37.500 0.00 0.00 0.00 4.45
3889 6657 6.948309 AGAAACTTGCAACAGATAATAACCCT 59.052 34.615 0.00 0.00 0.00 4.34
4098 7247 4.437239 GGTGATGCCTATATTCCAGATCG 58.563 47.826 0.00 0.00 0.00 3.69
4322 7471 3.159472 GCCATCCCAAGCATTATCATCA 58.841 45.455 0.00 0.00 0.00 3.07
4325 7474 3.225104 GAAGCCATCCCAAGCATTATCA 58.775 45.455 0.00 0.00 0.00 2.15
4632 7781 3.390639 TGTGGGTTTGATTTGGAAGCAAT 59.609 39.130 0.00 0.00 36.57 3.56
4715 7864 6.211184 TGTGGTCAGAGCCATTTCAAATAAAT 59.789 34.615 0.00 0.00 41.08 1.40
4782 7931 3.990469 GGTGATACCATATTCGACTGCAG 59.010 47.826 13.48 13.48 38.42 4.41
5065 8214 8.255206 ACGTATCTAAACATTATCCACAAGTCA 58.745 33.333 0.00 0.00 0.00 3.41
5080 8229 3.546670 CCTTCGAGTGCACGTATCTAAAC 59.453 47.826 12.01 0.00 34.70 2.01
5135 8286 0.888619 TGCCGAACAGTAGACCAGAG 59.111 55.000 0.00 0.00 0.00 3.35
5137 8288 0.108615 CCTGCCGAACAGTAGACCAG 60.109 60.000 4.95 0.00 45.68 4.00
5138 8289 1.972198 CCTGCCGAACAGTAGACCA 59.028 57.895 4.95 0.00 45.68 4.02
5188 8339 1.261089 CGCGAACCAAAACCGAAGTTA 59.739 47.619 0.00 0.00 34.19 2.24
5208 8359 7.284716 CCTATGAAGATAACAAAACTTACCCCC 59.715 40.741 0.00 0.00 0.00 5.40
5209 8360 7.832685 ACCTATGAAGATAACAAAACTTACCCC 59.167 37.037 0.00 0.00 0.00 4.95
5248 8399 0.831307 GGACGGAGGGAGTATTGCTT 59.169 55.000 0.00 0.00 0.00 3.91
5336 8487 3.775261 ATCTAGTACTCCCTCCGTCTC 57.225 52.381 0.00 0.00 0.00 3.36
5611 8766 4.444536 TCGGTAAAACAGTGTACAAGCTT 58.555 39.130 0.00 0.00 0.00 3.74
5612 8767 4.056050 CTCGGTAAAACAGTGTACAAGCT 58.944 43.478 0.00 0.00 0.00 3.74
5737 8892 3.574284 TTGGCATCACTGTAACAATGC 57.426 42.857 0.00 0.00 42.92 3.56
5815 8987 7.167968 GGCGTACAATACAAAGTAATCGACATA 59.832 37.037 0.00 0.00 0.00 2.29
5818 8990 5.289193 TGGCGTACAATACAAAGTAATCGAC 59.711 40.000 0.00 0.00 0.00 4.20
5944 9123 7.268586 AGTCACTTAGATGTGCAATAACTAGG 58.731 38.462 0.00 0.00 37.81 3.02
6052 9239 7.485418 TCGTTTCAAACTAACATAGCTTGAA 57.515 32.000 10.37 10.37 44.52 2.69
6074 9285 6.073058 CCATCCCACAACACAATATAAGATCG 60.073 42.308 0.00 0.00 0.00 3.69
6089 9300 1.625228 CCTACTCCCTCCATCCCACAA 60.625 57.143 0.00 0.00 0.00 3.33
6090 9301 0.031111 CCTACTCCCTCCATCCCACA 60.031 60.000 0.00 0.00 0.00 4.17
6091 9302 0.264955 TCCTACTCCCTCCATCCCAC 59.735 60.000 0.00 0.00 0.00 4.61
6092 9303 1.255033 ATCCTACTCCCTCCATCCCA 58.745 55.000 0.00 0.00 0.00 4.37
6093 9304 3.246167 ACATATCCTACTCCCTCCATCCC 60.246 52.174 0.00 0.00 0.00 3.85
6094 9305 3.772025 CACATATCCTACTCCCTCCATCC 59.228 52.174 0.00 0.00 0.00 3.51
6095 9306 3.772025 CCACATATCCTACTCCCTCCATC 59.228 52.174 0.00 0.00 0.00 3.51
6096 9307 3.144894 ACCACATATCCTACTCCCTCCAT 59.855 47.826 0.00 0.00 0.00 3.41
6097 9308 2.522705 ACCACATATCCTACTCCCTCCA 59.477 50.000 0.00 0.00 0.00 3.86
6098 9309 3.261818 ACCACATATCCTACTCCCTCC 57.738 52.381 0.00 0.00 0.00 4.30
6099 9310 5.145564 TGTTACCACATATCCTACTCCCTC 58.854 45.833 0.00 0.00 0.00 4.30
6100 9311 5.152306 TGTTACCACATATCCTACTCCCT 57.848 43.478 0.00 0.00 0.00 4.20
6101 9312 6.351117 GCTATGTTACCACATATCCTACTCCC 60.351 46.154 0.00 0.00 43.60 4.30
6102 9313 6.437793 AGCTATGTTACCACATATCCTACTCC 59.562 42.308 0.00 0.00 43.60 3.85
6103 9314 7.469537 AGCTATGTTACCACATATCCTACTC 57.530 40.000 0.00 0.00 43.60 2.59
6104 9315 7.509318 TCAAGCTATGTTACCACATATCCTACT 59.491 37.037 0.00 0.00 43.60 2.57
6105 9316 7.667557 TCAAGCTATGTTACCACATATCCTAC 58.332 38.462 0.00 0.00 43.60 3.18
6106 9317 7.849322 TCAAGCTATGTTACCACATATCCTA 57.151 36.000 0.00 0.00 43.60 2.94
6107 9318 6.747414 TCAAGCTATGTTACCACATATCCT 57.253 37.500 0.00 0.00 43.60 3.24
6108 9319 7.801716 TTTCAAGCTATGTTACCACATATCC 57.198 36.000 0.00 0.00 43.60 2.59
6131 9342 8.093927 CCATCCCACAACACAATATAAGTTTTT 58.906 33.333 0.00 0.00 0.00 1.94
6132 9343 7.453126 TCCATCCCACAACACAATATAAGTTTT 59.547 33.333 0.00 0.00 0.00 2.43
6133 9344 6.951198 TCCATCCCACAACACAATATAAGTTT 59.049 34.615 0.00 0.00 0.00 2.66
6134 9345 6.489603 TCCATCCCACAACACAATATAAGTT 58.510 36.000 0.00 0.00 0.00 2.66
6135 9346 6.073447 TCCATCCCACAACACAATATAAGT 57.927 37.500 0.00 0.00 0.00 2.24
6136 9347 5.532406 CCTCCATCCCACAACACAATATAAG 59.468 44.000 0.00 0.00 0.00 1.73
6137 9348 5.445069 CCTCCATCCCACAACACAATATAA 58.555 41.667 0.00 0.00 0.00 0.98
6138 9349 4.141274 CCCTCCATCCCACAACACAATATA 60.141 45.833 0.00 0.00 0.00 0.86
6139 9350 3.373001 CCCTCCATCCCACAACACAATAT 60.373 47.826 0.00 0.00 0.00 1.28
6140 9351 2.025416 CCCTCCATCCCACAACACAATA 60.025 50.000 0.00 0.00 0.00 1.90
6141 9352 1.272648 CCCTCCATCCCACAACACAAT 60.273 52.381 0.00 0.00 0.00 2.71
6142 9353 0.112218 CCCTCCATCCCACAACACAA 59.888 55.000 0.00 0.00 0.00 3.33
6143 9354 0.770166 TCCCTCCATCCCACAACACA 60.770 55.000 0.00 0.00 0.00 3.72
6144 9355 0.035056 CTCCCTCCATCCCACAACAC 60.035 60.000 0.00 0.00 0.00 3.32
6145 9356 0.475632 ACTCCCTCCATCCCACAACA 60.476 55.000 0.00 0.00 0.00 3.33
6146 9357 1.486726 CTACTCCCTCCATCCCACAAC 59.513 57.143 0.00 0.00 0.00 3.32
6147 9358 1.625228 CCTACTCCCTCCATCCCACAA 60.625 57.143 0.00 0.00 0.00 3.33
6148 9359 0.031111 CCTACTCCCTCCATCCCACA 60.031 60.000 0.00 0.00 0.00 4.17
6149 9360 0.264955 TCCTACTCCCTCCATCCCAC 59.735 60.000 0.00 0.00 0.00 4.61
6150 9361 1.255033 ATCCTACTCCCTCCATCCCA 58.745 55.000 0.00 0.00 0.00 4.37
6151 9362 3.246167 ACATATCCTACTCCCTCCATCCC 60.246 52.174 0.00 0.00 0.00 3.85
6152 9363 3.772025 CACATATCCTACTCCCTCCATCC 59.228 52.174 0.00 0.00 0.00 3.51
6153 9364 3.772025 CCACATATCCTACTCCCTCCATC 59.228 52.174 0.00 0.00 0.00 3.51
6154 9365 3.144894 ACCACATATCCTACTCCCTCCAT 59.855 47.826 0.00 0.00 0.00 3.41
6155 9366 2.522705 ACCACATATCCTACTCCCTCCA 59.477 50.000 0.00 0.00 0.00 3.86
6156 9367 3.261818 ACCACATATCCTACTCCCTCC 57.738 52.381 0.00 0.00 0.00 4.30
6157 9368 5.145564 TGTTACCACATATCCTACTCCCTC 58.854 45.833 0.00 0.00 0.00 4.30
6158 9369 5.152306 TGTTACCACATATCCTACTCCCT 57.848 43.478 0.00 0.00 0.00 4.20
6159 9370 6.724905 ACTATGTTACCACATATCCTACTCCC 59.275 42.308 0.00 0.00 43.60 4.30
6160 9371 7.778185 ACTATGTTACCACATATCCTACTCC 57.222 40.000 0.00 0.00 43.60 3.85
6161 9372 9.477484 CAAACTATGTTACCACATATCCTACTC 57.523 37.037 0.00 0.00 43.60 2.59
6162 9373 9.209048 TCAAACTATGTTACCACATATCCTACT 57.791 33.333 0.00 0.00 43.60 2.57
6163 9374 9.826574 TTCAAACTATGTTACCACATATCCTAC 57.173 33.333 0.00 0.00 43.60 3.18
6165 9376 9.747898 TTTTCAAACTATGTTACCACATATCCT 57.252 29.630 0.00 0.00 43.60 3.24
6189 9400 6.239572 CCTCCATCCCAACAATACAAGTTTTT 60.240 38.462 0.00 0.00 0.00 1.94
6190 9401 5.245977 CCTCCATCCCAACAATACAAGTTTT 59.754 40.000 0.00 0.00 0.00 2.43
6191 9402 4.772100 CCTCCATCCCAACAATACAAGTTT 59.228 41.667 0.00 0.00 0.00 2.66
6192 9403 4.344104 CCTCCATCCCAACAATACAAGTT 58.656 43.478 0.00 0.00 0.00 2.66
6193 9404 3.309121 CCCTCCATCCCAACAATACAAGT 60.309 47.826 0.00 0.00 0.00 3.16
6194 9405 3.053693 TCCCTCCATCCCAACAATACAAG 60.054 47.826 0.00 0.00 0.00 3.16
6195 9406 2.922955 TCCCTCCATCCCAACAATACAA 59.077 45.455 0.00 0.00 0.00 2.41
6196 9407 2.509548 CTCCCTCCATCCCAACAATACA 59.490 50.000 0.00 0.00 0.00 2.29
6197 9408 2.509964 ACTCCCTCCATCCCAACAATAC 59.490 50.000 0.00 0.00 0.00 1.89
6198 9409 2.858644 ACTCCCTCCATCCCAACAATA 58.141 47.619 0.00 0.00 0.00 1.90
6199 9410 1.686236 ACTCCCTCCATCCCAACAAT 58.314 50.000 0.00 0.00 0.00 2.71
6200 9411 2.196595 CTACTCCCTCCATCCCAACAA 58.803 52.381 0.00 0.00 0.00 2.83
6201 9412 1.879575 CTACTCCCTCCATCCCAACA 58.120 55.000 0.00 0.00 0.00 3.33
6202 9413 0.470341 GCTACTCCCTCCATCCCAAC 59.530 60.000 0.00 0.00 0.00 3.77
6203 9414 0.044092 TGCTACTCCCTCCATCCCAA 59.956 55.000 0.00 0.00 0.00 4.12
6204 9415 0.268869 ATGCTACTCCCTCCATCCCA 59.731 55.000 0.00 0.00 0.00 4.37
6205 9416 2.327325 TATGCTACTCCCTCCATCCC 57.673 55.000 0.00 0.00 0.00 3.85
6211 9422 6.346477 TGTTATCACATATGCTACTCCCTC 57.654 41.667 1.58 0.00 0.00 4.30
6213 9424 6.758886 GCTATGTTATCACATATGCTACTCCC 59.241 42.308 1.58 0.00 43.60 4.30
6271 9482 3.252944 GGACGGAAGGAGTATGCTACTAC 59.747 52.174 0.00 0.00 33.13 2.73
6272 9483 3.137913 AGGACGGAAGGAGTATGCTACTA 59.862 47.826 0.00 0.00 33.13 1.82
6286 9497 6.815089 TGTAAGTACACTTTTAAGGACGGAA 58.185 36.000 0.00 0.00 37.40 4.30
6308 9521 7.977789 AAAGTTGACTTTCCAACAAAATTGT 57.022 28.000 3.37 0.00 46.48 2.71
6309 9522 8.502387 TGAAAAGTTGACTTTCCAACAAAATTG 58.498 29.630 9.37 0.00 46.48 2.32
6380 9593 0.462789 GCCTGCCCTCAATTTGATGG 59.537 55.000 14.42 14.42 35.58 3.51
6381 9594 0.462789 GGCCTGCCCTCAATTTGATG 59.537 55.000 0.00 0.00 0.00 3.07
6382 9595 0.337428 AGGCCTGCCCTCAATTTGAT 59.663 50.000 3.11 0.00 41.21 2.57
6383 9596 0.612732 CAGGCCTGCCCTCAATTTGA 60.613 55.000 22.33 0.00 44.09 2.69
6384 9597 1.610554 CCAGGCCTGCCCTCAATTTG 61.611 60.000 28.39 5.53 44.09 2.32
6385 9598 1.305549 CCAGGCCTGCCCTCAATTT 60.306 57.895 28.39 0.00 44.09 1.82
6386 9599 2.361771 CCAGGCCTGCCCTCAATT 59.638 61.111 28.39 0.00 44.09 2.32
6387 9600 4.453892 GCCAGGCCTGCCCTCAAT 62.454 66.667 28.39 0.00 44.09 2.57
6399 9612 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
6400 9613 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
6401 9614 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
6402 9615 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
6403 9616 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
6404 9617 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
6405 9618 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
6411 9624 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
6412 9625 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
6413 9626 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
6414 9627 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
6415 9628 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
6416 9629 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
6417 9630 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
6428 9641 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
6429 9642 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
6430 9643 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
6431 9644 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
6432 9645 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
6433 9646 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
6434 9647 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
6435 9648 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
6436 9649 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
6437 9650 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
6446 9659 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
6447 9660 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
6448 9661 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
6449 9662 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
6450 9663 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
6451 9664 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
6452 9665 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
6453 9666 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
6455 9668 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
6456 9669 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
6457 9670 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
6458 9671 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
6469 9682 4.811557 CCTAGTCTTACCTATGCAAAGTGC 59.188 45.833 0.00 0.00 45.29 4.40
6470 9683 5.978814 ACCTAGTCTTACCTATGCAAAGTG 58.021 41.667 0.00 0.00 0.00 3.16
6471 9684 6.351966 GGAACCTAGTCTTACCTATGCAAAGT 60.352 42.308 0.00 0.00 0.00 2.66
6472 9685 6.049790 GGAACCTAGTCTTACCTATGCAAAG 58.950 44.000 0.00 0.00 0.00 2.77
6473 9686 5.724854 AGGAACCTAGTCTTACCTATGCAAA 59.275 40.000 0.00 0.00 0.00 3.68
6474 9687 5.278061 AGGAACCTAGTCTTACCTATGCAA 58.722 41.667 0.00 0.00 0.00 4.08
6475 9688 4.880164 AGGAACCTAGTCTTACCTATGCA 58.120 43.478 0.00 0.00 0.00 3.96
6476 9689 8.647256 TTATAGGAACCTAGTCTTACCTATGC 57.353 38.462 0.00 0.00 39.83 3.14
6478 9691 9.994017 GGATTATAGGAACCTAGTCTTACCTAT 57.006 37.037 0.00 0.00 41.56 2.57
6479 9692 8.397172 GGGATTATAGGAACCTAGTCTTACCTA 58.603 40.741 6.72 0.00 35.06 3.08
6480 9693 7.076566 AGGGATTATAGGAACCTAGTCTTACCT 59.923 40.741 6.72 6.80 31.45 3.08
6481 9694 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
6482 9695 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
6483 9696 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
6484 9697 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
6485 9698 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
6486 9699 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
6487 9700 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
6488 9701 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
6489 9702 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
6490 9703 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
6491 9704 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
6492 9705 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
6493 9706 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
6494 9707 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
6495 9708 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
6496 9709 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
6497 9710 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
6498 9711 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
6499 9712 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
6500 9713 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
6501 9714 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
6502 9715 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
6504 9717 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
6505 9718 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
6506 9719 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
6507 9720 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
6508 9721 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
6509 9722 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
6510 9723 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
6518 9731 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
6519 9732 3.274288 GAATAGAAGCTCCCACACAAGG 58.726 50.000 0.00 0.00 0.00 3.61
6520 9733 2.932614 CGAATAGAAGCTCCCACACAAG 59.067 50.000 0.00 0.00 0.00 3.16
6521 9734 2.935238 GCGAATAGAAGCTCCCACACAA 60.935 50.000 0.00 0.00 0.00 3.33
6522 9735 1.405526 GCGAATAGAAGCTCCCACACA 60.406 52.381 0.00 0.00 0.00 3.72
6523 9736 1.134670 AGCGAATAGAAGCTCCCACAC 60.135 52.381 0.00 0.00 39.98 3.82
6524 9737 1.134699 CAGCGAATAGAAGCTCCCACA 60.135 52.381 0.00 0.00 42.52 4.17
6525 9738 1.576356 CAGCGAATAGAAGCTCCCAC 58.424 55.000 0.00 0.00 42.52 4.61
6526 9739 0.465705 CCAGCGAATAGAAGCTCCCA 59.534 55.000 0.00 0.00 42.52 4.37
6527 9740 0.250081 CCCAGCGAATAGAAGCTCCC 60.250 60.000 0.00 0.00 42.52 4.30
6528 9741 0.466124 ACCCAGCGAATAGAAGCTCC 59.534 55.000 0.00 0.00 42.52 4.70
6529 9742 1.410882 AGACCCAGCGAATAGAAGCTC 59.589 52.381 0.00 0.00 42.52 4.09
6530 9743 1.137872 CAGACCCAGCGAATAGAAGCT 59.862 52.381 0.00 0.00 45.74 3.74
6531 9744 1.134670 ACAGACCCAGCGAATAGAAGC 60.135 52.381 0.00 0.00 0.00 3.86
6532 9745 2.482142 GGACAGACCCAGCGAATAGAAG 60.482 54.545 0.00 0.00 0.00 2.85
6533 9746 1.480954 GGACAGACCCAGCGAATAGAA 59.519 52.381 0.00 0.00 0.00 2.10
6534 9747 1.112113 GGACAGACCCAGCGAATAGA 58.888 55.000 0.00 0.00 0.00 1.98
6535 9748 1.115467 AGGACAGACCCAGCGAATAG 58.885 55.000 0.00 0.00 40.05 1.73
6536 9749 1.568504 AAGGACAGACCCAGCGAATA 58.431 50.000 0.00 0.00 40.05 1.75
6537 9750 0.693049 AAAGGACAGACCCAGCGAAT 59.307 50.000 0.00 0.00 40.05 3.34
6538 9751 1.344065 TAAAGGACAGACCCAGCGAA 58.656 50.000 0.00 0.00 40.05 4.70
6539 9752 1.568504 ATAAAGGACAGACCCAGCGA 58.431 50.000 0.00 0.00 40.05 4.93
6540 9753 2.403252 AATAAAGGACAGACCCAGCG 57.597 50.000 0.00 0.00 40.05 5.18
6541 9754 4.036852 GCATAAATAAAGGACAGACCCAGC 59.963 45.833 0.00 0.00 40.05 4.85
6542 9755 4.580580 GGCATAAATAAAGGACAGACCCAG 59.419 45.833 0.00 0.00 40.05 4.45
6543 9756 4.017958 TGGCATAAATAAAGGACAGACCCA 60.018 41.667 0.00 0.00 40.05 4.51
6544 9757 4.532834 TGGCATAAATAAAGGACAGACCC 58.467 43.478 0.00 0.00 40.05 4.46
6545 9758 5.827797 TGATGGCATAAATAAAGGACAGACC 59.172 40.000 0.00 0.00 39.35 3.85
6546 9759 6.942532 TGATGGCATAAATAAAGGACAGAC 57.057 37.500 0.00 0.00 0.00 3.51
6547 9760 7.953005 TTTGATGGCATAAATAAAGGACAGA 57.047 32.000 0.00 0.00 0.00 3.41
6589 9802 3.041940 GGCAACACCTCGGACACG 61.042 66.667 0.00 0.00 42.74 4.49
6590 9803 2.110213 TGGCAACACCTCGGACAC 59.890 61.111 0.00 0.00 46.17 3.67
6619 9832 4.016444 AGGTGATGCCATTAACGTTGAAT 58.984 39.130 11.99 4.25 40.61 2.57
6620 9833 3.417101 AGGTGATGCCATTAACGTTGAA 58.583 40.909 11.99 1.87 40.61 2.69
6622 9835 3.848272 AAGGTGATGCCATTAACGTTG 57.152 42.857 11.99 0.00 40.61 4.10
6634 9847 1.675310 TGGCTCGCCAAAGGTGATG 60.675 57.895 8.43 0.00 44.12 3.07
6653 9866 1.268899 CAGCTTTGCAGACCTTCAAGG 59.731 52.381 0.22 0.22 42.49 3.61
6654 9867 1.335689 GCAGCTTTGCAGACCTTCAAG 60.336 52.381 0.00 0.00 34.41 3.02
6655 9868 0.670162 GCAGCTTTGCAGACCTTCAA 59.330 50.000 0.00 0.00 34.41 2.69
6656 9869 0.466007 TGCAGCTTTGCAGACCTTCA 60.466 50.000 0.00 0.00 40.23 3.02
6657 9870 2.334307 TGCAGCTTTGCAGACCTTC 58.666 52.632 0.00 0.00 40.23 3.46
6658 9871 4.585070 TGCAGCTTTGCAGACCTT 57.415 50.000 0.00 0.00 40.23 3.50
6678 9891 0.829990 TGATGCGGCTCCATTACTGA 59.170 50.000 0.00 0.00 0.00 3.41
6682 9895 3.820467 CCTTATTTGATGCGGCTCCATTA 59.180 43.478 0.00 0.00 0.00 1.90
6693 9906 5.933617 TCATCTCCTCACCCTTATTTGATG 58.066 41.667 0.00 0.00 0.00 3.07
6694 9907 6.240118 GGATCATCTCCTCACCCTTATTTGAT 60.240 42.308 0.00 0.00 41.29 2.57
6697 9910 4.040952 CGGATCATCTCCTCACCCTTATTT 59.959 45.833 0.00 0.00 42.47 1.40
6699 9912 3.169099 CGGATCATCTCCTCACCCTTAT 58.831 50.000 0.00 0.00 42.47 1.73
6701 9914 1.343478 ACGGATCATCTCCTCACCCTT 60.343 52.381 0.00 0.00 42.47 3.95
6702 9915 0.263172 ACGGATCATCTCCTCACCCT 59.737 55.000 0.00 0.00 42.47 4.34
6719 9932 6.386654 AGTAGCCACCAAAATAAAAATGACG 58.613 36.000 0.00 0.00 0.00 4.35
6720 9933 9.353999 CTTAGTAGCCACCAAAATAAAAATGAC 57.646 33.333 0.00 0.00 0.00 3.06
6721 9934 8.527810 CCTTAGTAGCCACCAAAATAAAAATGA 58.472 33.333 0.00 0.00 0.00 2.57
6722 9935 8.311109 ACCTTAGTAGCCACCAAAATAAAAATG 58.689 33.333 0.00 0.00 0.00 2.32
6723 9936 8.311109 CACCTTAGTAGCCACCAAAATAAAAAT 58.689 33.333 0.00 0.00 0.00 1.82
6728 9941 4.290196 ACCACCTTAGTAGCCACCAAAATA 59.710 41.667 0.00 0.00 0.00 1.40
6729 9942 3.075432 ACCACCTTAGTAGCCACCAAAAT 59.925 43.478 0.00 0.00 0.00 1.82
6733 9946 0.981183 CACCACCTTAGTAGCCACCA 59.019 55.000 0.00 0.00 0.00 4.17
6735 9948 1.621814 TGTCACCACCTTAGTAGCCAC 59.378 52.381 0.00 0.00 0.00 5.01
6738 9951 3.244457 ACCTTTGTCACCACCTTAGTAGC 60.244 47.826 0.00 0.00 0.00 3.58
6745 9958 0.106719 CACCACCTTTGTCACCACCT 60.107 55.000 0.00 0.00 0.00 4.00
6753 9966 3.016736 CTGAACTTGACACCACCTTTGT 58.983 45.455 0.00 0.00 0.00 2.83
6756 9969 2.158755 CCTCTGAACTTGACACCACCTT 60.159 50.000 0.00 0.00 0.00 3.50
6760 9973 3.648067 AGAATCCTCTGAACTTGACACCA 59.352 43.478 0.00 0.00 0.00 4.17
6779 9992 9.354673 AGGAAAAATACAATCAAGACTGAAGAA 57.645 29.630 0.00 0.00 34.49 2.52
6780 9993 8.924511 AGGAAAAATACAATCAAGACTGAAGA 57.075 30.769 0.00 0.00 34.49 2.87
6781 9994 9.971922 AAAGGAAAAATACAATCAAGACTGAAG 57.028 29.630 0.00 0.00 34.49 3.02
6785 9998 9.546428 CCAAAAAGGAAAAATACAATCAAGACT 57.454 29.630 0.00 0.00 41.22 3.24
6786 9999 8.282592 GCCAAAAAGGAAAAATACAATCAAGAC 58.717 33.333 0.00 0.00 41.22 3.01
6787 10000 8.210265 AGCCAAAAAGGAAAAATACAATCAAGA 58.790 29.630 0.00 0.00 41.22 3.02
6788 10001 8.284693 CAGCCAAAAAGGAAAAATACAATCAAG 58.715 33.333 0.00 0.00 41.22 3.02
6789 10002 7.228308 CCAGCCAAAAAGGAAAAATACAATCAA 59.772 33.333 0.00 0.00 41.22 2.57
6790 10003 6.709846 CCAGCCAAAAAGGAAAAATACAATCA 59.290 34.615 0.00 0.00 41.22 2.57
6791 10004 6.710295 ACCAGCCAAAAAGGAAAAATACAATC 59.290 34.615 0.00 0.00 41.22 2.67
6792 10005 6.486320 CACCAGCCAAAAAGGAAAAATACAAT 59.514 34.615 0.00 0.00 41.22 2.71
6793 10006 5.819901 CACCAGCCAAAAAGGAAAAATACAA 59.180 36.000 0.00 0.00 41.22 2.41
6794 10007 5.363939 CACCAGCCAAAAAGGAAAAATACA 58.636 37.500 0.00 0.00 41.22 2.29
6795 10008 4.213270 GCACCAGCCAAAAAGGAAAAATAC 59.787 41.667 0.00 0.00 41.22 1.89
6796 10009 4.102367 AGCACCAGCCAAAAAGGAAAAATA 59.898 37.500 0.00 0.00 43.56 1.40
6797 10010 3.117926 AGCACCAGCCAAAAAGGAAAAAT 60.118 39.130 0.00 0.00 43.56 1.82
6798 10011 2.238395 AGCACCAGCCAAAAAGGAAAAA 59.762 40.909 0.00 0.00 43.56 1.94
6799 10012 1.836802 AGCACCAGCCAAAAAGGAAAA 59.163 42.857 0.00 0.00 43.56 2.29
6800 10013 1.412343 GAGCACCAGCCAAAAAGGAAA 59.588 47.619 0.00 0.00 43.56 3.13
6801 10014 1.039856 GAGCACCAGCCAAAAAGGAA 58.960 50.000 0.00 0.00 43.56 3.36
6802 10015 0.827507 GGAGCACCAGCCAAAAAGGA 60.828 55.000 0.00 0.00 43.56 3.36
6803 10016 0.829182 AGGAGCACCAGCCAAAAAGG 60.829 55.000 2.07 0.00 43.56 3.11
6804 10017 1.043022 AAGGAGCACCAGCCAAAAAG 58.957 50.000 2.07 0.00 43.56 2.27
6805 10018 1.138661 CAAAGGAGCACCAGCCAAAAA 59.861 47.619 2.07 0.00 43.56 1.94
6806 10019 0.752054 CAAAGGAGCACCAGCCAAAA 59.248 50.000 2.07 0.00 43.56 2.44
6807 10020 0.396974 ACAAAGGAGCACCAGCCAAA 60.397 50.000 2.07 0.00 43.56 3.28
6808 10021 1.108727 CACAAAGGAGCACCAGCCAA 61.109 55.000 2.07 0.00 43.56 4.52
6809 10022 1.529010 CACAAAGGAGCACCAGCCA 60.529 57.895 2.07 0.00 43.56 4.75
6810 10023 2.924105 GCACAAAGGAGCACCAGCC 61.924 63.158 2.07 0.00 43.56 4.85
6811 10024 1.737355 TTGCACAAAGGAGCACCAGC 61.737 55.000 2.07 0.00 40.39 4.85
6812 10025 0.746063 TTTGCACAAAGGAGCACCAG 59.254 50.000 2.07 0.00 40.39 4.00
6813 10026 0.746063 CTTTGCACAAAGGAGCACCA 59.254 50.000 14.08 0.00 42.96 4.17
6814 10027 3.575399 CTTTGCACAAAGGAGCACC 57.425 52.632 14.08 0.00 42.96 5.01
6821 10034 3.308438 AATGCTAGCCTTTGCACAAAG 57.692 42.857 13.29 14.79 45.47 2.77
6822 10035 3.749665 AAATGCTAGCCTTTGCACAAA 57.250 38.095 16.03 0.00 42.26 2.83
6823 10036 3.391965 CAAAATGCTAGCCTTTGCACAA 58.608 40.909 17.25 0.00 42.26 3.33
6824 10037 3.029320 CAAAATGCTAGCCTTTGCACA 57.971 42.857 17.25 0.00 42.26 4.57
6849 10062 5.749596 ACATCGATGTGACAACTGAAAAA 57.250 34.783 29.49 0.00 40.03 1.94
6862 10075 1.198408 ACGTCACGTACACATCGATGT 59.802 47.619 25.18 25.18 39.08 3.06
6863 10076 1.577578 CACGTCACGTACACATCGATG 59.422 52.381 23.68 23.68 38.32 3.84
6864 10077 1.198408 ACACGTCACGTACACATCGAT 59.802 47.619 0.41 0.00 38.32 3.59
6865 10078 0.587768 ACACGTCACGTACACATCGA 59.412 50.000 0.41 0.00 38.32 3.59
6866 10079 2.163638 CTACACGTCACGTACACATCG 58.836 52.381 0.41 0.00 38.32 3.84
6867 10080 1.909532 GCTACACGTCACGTACACATC 59.090 52.381 0.41 0.00 38.32 3.06
6868 10081 1.267533 TGCTACACGTCACGTACACAT 59.732 47.619 0.41 0.00 38.32 3.21
6869 10082 0.662085 TGCTACACGTCACGTACACA 59.338 50.000 0.41 0.00 38.32 3.72
6870 10083 3.460114 TGCTACACGTCACGTACAC 57.540 52.632 0.41 0.00 38.32 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.