Multiple sequence alignment - TraesCS2A01G202800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G202800 chr2A 100.000 8511 0 0 1 8511 177009589 177018099 0.000000e+00 15717.0
1 TraesCS2A01G202800 chr2A 95.148 2432 79 14 2483 4878 578392907 578390479 0.000000e+00 3801.0
2 TraesCS2A01G202800 chr2A 94.512 984 29 8 3936 4900 90221518 90220541 0.000000e+00 1495.0
3 TraesCS2A01G202800 chr2A 89.552 201 20 1 7791 7991 705782781 705782980 3.940000e-63 254.0
4 TraesCS2A01G202800 chr2A 89.916 119 9 2 8049 8165 493336447 493336564 5.320000e-32 150.0
5 TraesCS2A01G202800 chr2A 84.706 85 8 4 7970 8051 177017597 177017679 7.080000e-11 80.5
6 TraesCS2A01G202800 chr2D 94.949 3207 104 29 4884 8051 172819104 172815917 0.000000e+00 4972.0
7 TraesCS2A01G202800 chr2D 93.427 2480 81 25 1 2430 172821606 172819159 0.000000e+00 3602.0
8 TraesCS2A01G202800 chr2D 93.506 154 10 0 8164 8317 7164995 7164842 6.650000e-56 230.0
9 TraesCS2A01G202800 chr2D 91.613 155 12 1 8009 8163 172815999 172815846 6.690000e-51 213.0
10 TraesCS2A01G202800 chr3D 95.181 2407 84 12 2513 4889 341505986 341508390 0.000000e+00 3773.0
11 TraesCS2A01G202800 chr3D 93.082 159 11 0 8165 8323 33061417 33061259 5.140000e-57 233.0
12 TraesCS2A01G202800 chr3D 92.547 161 12 0 8163 8323 610920806 610920646 1.850000e-56 231.0
13 TraesCS2A01G202800 chr3D 84.305 223 32 2 8165 8386 30043026 30042806 1.860000e-51 215.0
14 TraesCS2A01G202800 chr3D 85.185 162 15 5 8165 8323 346339653 346339808 3.180000e-34 158.0
15 TraesCS2A01G202800 chr3D 90.598 117 6 3 8052 8165 454500070 454499956 5.320000e-32 150.0
16 TraesCS2A01G202800 chr3D 90.588 85 5 2 606 687 236661938 236662022 9.030000e-20 110.0
17 TraesCS2A01G202800 chr3A 94.903 2433 83 15 2483 4877 217719760 217717331 0.000000e+00 3768.0
18 TraesCS2A01G202800 chr3A 94.670 2439 91 14 2483 4885 77485237 77487672 0.000000e+00 3747.0
19 TraesCS2A01G202800 chr3A 86.432 597 59 6 783 1365 712303232 712303820 1.210000e-177 634.0
20 TraesCS2A01G202800 chr3A 88.406 207 20 3 7791 7994 699486080 699485875 6.600000e-61 246.0
21 TraesCS2A01G202800 chr3A 90.588 85 5 2 606 687 323399400 323399316 9.030000e-20 110.0
22 TraesCS2A01G202800 chr5A 94.556 2443 97 13 2483 4889 483274155 483276597 0.000000e+00 3742.0
23 TraesCS2A01G202800 chr5A 89.655 203 20 1 7790 7991 228892251 228892453 3.050000e-64 257.0
24 TraesCS2A01G202800 chr5A 89.916 119 9 2 8049 8165 573057745 573057628 5.320000e-32 150.0
25 TraesCS2A01G202800 chr5A 88.889 90 6 2 606 691 141878786 141878875 3.250000e-19 108.0
26 TraesCS2A01G202800 chr3B 94.444 2430 96 17 2483 4875 128483214 128485641 0.000000e+00 3703.0
27 TraesCS2A01G202800 chr3B 93.999 2333 106 20 2566 4878 217989754 217987436 0.000000e+00 3502.0
28 TraesCS2A01G202800 chr3B 93.728 2312 113 18 2587 4878 219488445 219486146 0.000000e+00 3437.0
29 TraesCS2A01G202800 chr3B 87.234 1457 167 12 3425 4868 74892110 74893560 0.000000e+00 1642.0
30 TraesCS2A01G202800 chr1B 93.204 2428 137 19 2483 4889 365469177 365471597 0.000000e+00 3544.0
31 TraesCS2A01G202800 chr1B 92.683 41 3 0 8011 8051 676171955 676171915 9.230000e-05 60.2
32 TraesCS2A01G202800 chr2B 93.482 2332 67 18 1 2305 225432774 225435047 0.000000e+00 3386.0
33 TraesCS2A01G202800 chr2B 89.394 1782 145 25 5957 7708 225436415 225438182 0.000000e+00 2204.0
34 TraesCS2A01G202800 chr2B 88.221 832 58 15 4884 5708 225435199 225435997 0.000000e+00 957.0
35 TraesCS2A01G202800 chr2B 87.854 247 24 2 5707 5951 225436079 225436321 1.400000e-72 285.0
36 TraesCS2A01G202800 chr1D 95.343 2126 72 7 2786 4884 223522458 223524583 0.000000e+00 3352.0
37 TraesCS2A01G202800 chr1D 85.135 148 17 4 8173 8317 463935445 463935300 6.880000e-31 147.0
38 TraesCS2A01G202800 chr1D 82.822 163 22 5 8165 8323 463947987 463947827 3.200000e-29 141.0
39 TraesCS2A01G202800 chr1D 90.566 106 9 1 8059 8164 476839716 476839820 1.150000e-28 139.0
40 TraesCS2A01G202800 chr1D 91.667 96 7 1 8059 8154 374365396 374365302 1.930000e-26 132.0
41 TraesCS2A01G202800 chr5D 94.900 2098 71 13 2483 4545 574715 572619 0.000000e+00 3249.0
42 TraesCS2A01G202800 chr5D 87.862 1071 110 12 3808 4867 152753046 152754107 0.000000e+00 1240.0
43 TraesCS2A01G202800 chr5D 88.177 203 22 2 7790 7991 441220541 441220742 3.070000e-59 241.0
44 TraesCS2A01G202800 chr5D 93.082 159 11 0 8165 8323 117842610 117842768 5.140000e-57 233.0
45 TraesCS2A01G202800 chr5D 87.624 202 19 5 7793 7991 520682599 520682797 6.650000e-56 230.0
46 TraesCS2A01G202800 chr5D 86.634 202 23 3 7793 7991 311894645 311894845 4.000000e-53 220.0
47 TraesCS2A01G202800 chr5D 87.037 162 16 4 8165 8323 517596756 517596597 2.440000e-40 178.0
48 TraesCS2A01G202800 chr5D 91.589 107 8 1 8059 8165 483622494 483622389 6.880000e-31 147.0
49 TraesCS2A01G202800 chr5D 90.654 107 8 2 8059 8165 451159431 451159327 3.200000e-29 141.0
50 TraesCS2A01G202800 chr5D 90.698 43 4 0 8009 8051 380185993 380186035 3.320000e-04 58.4
51 TraesCS2A01G202800 chr4D 94.556 1837 64 13 2483 4283 428566027 428567863 0.000000e+00 2806.0
52 TraesCS2A01G202800 chr4D 89.855 207 20 1 7793 7998 379253115 379253321 1.820000e-66 265.0
53 TraesCS2A01G202800 chr4D 89.313 131 14 0 8187 8317 108183238 108183108 1.900000e-36 165.0
54 TraesCS2A01G202800 chr4D 86.184 152 14 6 8164 8312 77175785 77175932 3.180000e-34 158.0
55 TraesCS2A01G202800 chr4D 83.832 167 15 9 8165 8323 205026669 205026831 1.910000e-31 148.0
56 TraesCS2A01G202800 chr4D 83.333 162 15 9 8164 8317 181259125 181258968 1.150000e-28 139.0
57 TraesCS2A01G202800 chr4D 83.333 162 15 9 8164 8317 205031014 205031171 1.150000e-28 139.0
58 TraesCS2A01G202800 chr4D 91.753 97 5 3 8070 8165 489204677 489204771 1.930000e-26 132.0
59 TraesCS2A01G202800 chr4D 88.636 88 9 1 8072 8159 379253478 379253564 1.170000e-18 106.0
60 TraesCS2A01G202800 chr6A 91.862 811 52 8 1226 2032 80477885 80477085 0.000000e+00 1120.0
61 TraesCS2A01G202800 chr6A 92.193 538 34 6 4884 5420 80476576 80476046 0.000000e+00 754.0
62 TraesCS2A01G202800 chr6A 95.041 363 17 1 2031 2392 80477024 80476662 3.450000e-158 569.0
63 TraesCS2A01G202800 chr6A 87.440 207 24 2 7790 7994 101855533 101855327 3.970000e-58 237.0
64 TraesCS2A01G202800 chr6A 85.922 206 27 2 7790 7994 604155261 604155057 1.440000e-52 219.0
65 TraesCS2A01G202800 chr6A 88.535 157 17 1 8167 8323 614685240 614685395 1.130000e-43 189.0
66 TraesCS2A01G202800 chr6A 83.590 195 28 4 7804 7996 483895378 483895186 6.790000e-41 180.0
67 TraesCS2A01G202800 chr6A 90.435 115 8 2 8052 8164 359015341 359015228 1.910000e-31 148.0
68 TraesCS2A01G202800 chr6A 89.720 107 8 2 8052 8155 610859147 610859041 5.360000e-27 134.0
69 TraesCS2A01G202800 chr6A 88.636 88 7 1 603 687 88856187 88856274 4.200000e-18 104.0
70 TraesCS2A01G202800 chr6D 87.960 598 49 7 783 1365 2368833 2369422 0.000000e+00 684.0
71 TraesCS2A01G202800 chr6D 92.453 159 12 0 8165 8323 132367414 132367256 2.390000e-55 228.0
72 TraesCS2A01G202800 chr6D 78.512 242 32 18 8165 8393 3889046 3889280 3.200000e-29 141.0
73 TraesCS2A01G202800 chr6D 83.824 136 16 5 8189 8320 3912507 3912640 3.230000e-24 124.0
74 TraesCS2A01G202800 chr6D 87.736 106 9 4 8059 8163 289717765 289717867 4.170000e-23 121.0
75 TraesCS2A01G202800 chr4B 90.213 235 19 3 8158 8392 459521207 459520977 3.860000e-78 303.0
76 TraesCS2A01G202800 chr4B 85.784 204 25 3 7793 7993 592675368 592675570 6.690000e-51 213.0
77 TraesCS2A01G202800 chr4B 90.517 116 8 2 8052 8165 605828504 605828390 5.320000e-32 150.0
78 TraesCS2A01G202800 chr4B 83.333 168 17 9 8163 8323 648587821 648587658 2.480000e-30 145.0
79 TraesCS2A01G202800 chr4B 88.235 119 11 2 8049 8165 42929164 42929281 1.150000e-28 139.0
80 TraesCS2A01G202800 chr7A 86.957 230 27 3 8165 8394 245599728 245599502 1.100000e-63 255.0
81 TraesCS2A01G202800 chr7A 88.235 204 21 3 7790 7991 232282223 232282425 3.070000e-59 241.0
82 TraesCS2A01G202800 chr7A 88.298 94 6 3 606 696 542815900 542815809 3.250000e-19 108.0
83 TraesCS2A01G202800 chr7D 88.670 203 22 1 7793 7994 547294044 547293842 6.600000e-61 246.0
84 TraesCS2A01G202800 chr7D 88.889 90 6 2 606 692 238998593 238998505 3.250000e-19 108.0
85 TraesCS2A01G202800 chr7D 88.889 90 6 2 606 692 239380310 239380222 3.250000e-19 108.0
86 TraesCS2A01G202800 chr6B 87.204 211 25 2 7785 7994 508495595 508495386 1.100000e-58 239.0
87 TraesCS2A01G202800 chr6B 87.379 206 24 2 7790 7994 543224338 543224134 1.430000e-57 235.0
88 TraesCS2A01G202800 chr6B 80.932 236 31 12 8165 8394 78302112 78301885 3.160000e-39 174.0
89 TraesCS2A01G202800 chr6B 90.756 119 8 2 8049 8165 599801345 599801462 1.140000e-33 156.0
90 TraesCS2A01G202800 chr6B 89.076 119 10 2 8049 8165 543237444 543237561 2.480000e-30 145.0
91 TraesCS2A01G202800 chr5B 92.453 159 12 0 8165 8323 129283900 129283742 2.390000e-55 228.0
92 TraesCS2A01G202800 chr5B 91.558 154 13 0 8164 8317 439355866 439355713 6.690000e-51 213.0
93 TraesCS2A01G202800 chr1A 84.951 206 30 1 7790 7994 71308290 71308085 3.110000e-49 207.0
94 TraesCS2A01G202800 chr1A 89.655 116 7 3 8052 8164 495496274 495496161 8.910000e-30 143.0
95 TraesCS2A01G202800 chrUn 90.517 116 8 2 8052 8165 147247833 147247719 5.320000e-32 150.0
96 TraesCS2A01G202800 chrUn 90.517 116 8 2 8052 8165 279384486 279384372 5.320000e-32 150.0
97 TraesCS2A01G202800 chrUn 89.655 116 9 2 8052 8165 147178090 147177976 2.480000e-30 145.0
98 TraesCS2A01G202800 chrUn 89.815 108 8 2 8059 8165 77401697 77401592 1.490000e-27 135.0
99 TraesCS2A01G202800 chr7B 90.517 116 8 2 8052 8165 671012235 671012121 5.320000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G202800 chr2A 177009589 177018099 8510 False 7898.750000 15717 92.353000 1 8511 2 chr2A.!!$F3 8510
1 TraesCS2A01G202800 chr2A 578390479 578392907 2428 True 3801.000000 3801 95.148000 2483 4878 1 chr2A.!!$R2 2395
2 TraesCS2A01G202800 chr2A 90220541 90221518 977 True 1495.000000 1495 94.512000 3936 4900 1 chr2A.!!$R1 964
3 TraesCS2A01G202800 chr2D 172815846 172821606 5760 True 2929.000000 4972 93.329667 1 8163 3 chr2D.!!$R2 8162
4 TraesCS2A01G202800 chr3D 341505986 341508390 2404 False 3773.000000 3773 95.181000 2513 4889 1 chr3D.!!$F2 2376
5 TraesCS2A01G202800 chr3A 217717331 217719760 2429 True 3768.000000 3768 94.903000 2483 4877 1 chr3A.!!$R1 2394
6 TraesCS2A01G202800 chr3A 77485237 77487672 2435 False 3747.000000 3747 94.670000 2483 4885 1 chr3A.!!$F1 2402
7 TraesCS2A01G202800 chr3A 712303232 712303820 588 False 634.000000 634 86.432000 783 1365 1 chr3A.!!$F2 582
8 TraesCS2A01G202800 chr5A 483274155 483276597 2442 False 3742.000000 3742 94.556000 2483 4889 1 chr5A.!!$F3 2406
9 TraesCS2A01G202800 chr3B 128483214 128485641 2427 False 3703.000000 3703 94.444000 2483 4875 1 chr3B.!!$F2 2392
10 TraesCS2A01G202800 chr3B 217987436 217989754 2318 True 3502.000000 3502 93.999000 2566 4878 1 chr3B.!!$R1 2312
11 TraesCS2A01G202800 chr3B 219486146 219488445 2299 True 3437.000000 3437 93.728000 2587 4878 1 chr3B.!!$R2 2291
12 TraesCS2A01G202800 chr3B 74892110 74893560 1450 False 1642.000000 1642 87.234000 3425 4868 1 chr3B.!!$F1 1443
13 TraesCS2A01G202800 chr1B 365469177 365471597 2420 False 3544.000000 3544 93.204000 2483 4889 1 chr1B.!!$F1 2406
14 TraesCS2A01G202800 chr2B 225432774 225438182 5408 False 1708.000000 3386 89.737750 1 7708 4 chr2B.!!$F1 7707
15 TraesCS2A01G202800 chr1D 223522458 223524583 2125 False 3352.000000 3352 95.343000 2786 4884 1 chr1D.!!$F1 2098
16 TraesCS2A01G202800 chr5D 572619 574715 2096 True 3249.000000 3249 94.900000 2483 4545 1 chr5D.!!$R1 2062
17 TraesCS2A01G202800 chr5D 152753046 152754107 1061 False 1240.000000 1240 87.862000 3808 4867 1 chr5D.!!$F2 1059
18 TraesCS2A01G202800 chr4D 428566027 428567863 1836 False 2806.000000 2806 94.556000 2483 4283 1 chr4D.!!$F4 1800
19 TraesCS2A01G202800 chr6A 80476046 80477885 1839 True 814.333333 1120 93.032000 1226 5420 3 chr6A.!!$R6 4194
20 TraesCS2A01G202800 chr6D 2368833 2369422 589 False 684.000000 684 87.960000 783 1365 1 chr6D.!!$F1 582

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
748 777 0.240945 GGGTTGAATGGAACGTGCAG 59.759 55.0 0.00 0.00 0.00 4.41 F
2699 2870 0.106519 AGCTGGTGGTTGCTGACTTT 60.107 50.0 0.00 0.00 38.21 2.66 F
3640 3820 0.251354 GAGAGAGCCATTGAGCACCA 59.749 55.0 0.00 0.00 34.23 4.17 F
4219 4442 0.107312 CAGATGGTGCCTCAGAAGGG 60.107 60.0 0.00 0.00 43.58 3.95 F
5083 5309 0.162507 CAACGCTCTGTTTGCTCGAG 59.837 55.0 8.45 8.45 39.29 4.04 F
5916 6240 0.324552 TGCTTGTTGGGGATGATGGG 60.325 55.0 0.00 0.00 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2720 2892 0.037590 ACTTTGGCACGCTTATCCCA 59.962 50.000 0.00 0.0 0.00 4.37 R
4219 4442 2.357952 GACCCCAAATATCGAAAGGTGC 59.642 50.000 0.00 0.0 0.00 5.01 R
5339 5566 1.202359 TGTCACGCAAGCGCATATCTA 60.202 47.619 15.09 0.0 44.19 1.98 R
6087 6510 1.125711 ACCCCACCTGCGTTAAGAGT 61.126 55.000 0.00 0.0 0.00 3.24 R
6115 6538 1.480954 CGGTTGGCTAGTGGTATGAGT 59.519 52.381 0.00 0.0 0.00 3.41 R
7718 8173 0.041312 CAGAGTGGCCGAAACAAACG 60.041 55.000 0.00 0.0 0.00 3.60 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 156 2.363683 GTGCCTTTCCCAATCTCTCTG 58.636 52.381 0.00 0.00 0.00 3.35
303 311 0.930742 CTCGTGCTTCGTATCTCCGC 60.931 60.000 2.39 0.00 40.80 5.54
344 352 5.341617 GTTCGAGATTTCTACACTCCGATT 58.658 41.667 0.00 0.00 0.00 3.34
540 554 3.791953 TTTTTCATTGAGGGGTCGGTA 57.208 42.857 0.00 0.00 0.00 4.02
619 645 6.688578 TCCTCTGTTCTGTTGAAGTGTATAC 58.311 40.000 0.00 0.00 32.15 1.47
621 647 4.921515 TCTGTTCTGTTGAAGTGTATACGC 59.078 41.667 8.42 8.42 32.15 4.42
625 651 4.482386 TCTGTTGAAGTGTATACGCAGAC 58.518 43.478 18.25 10.71 0.00 3.51
722 751 5.880054 ACGTCCATCCAAATTCAAGTAAG 57.120 39.130 0.00 0.00 0.00 2.34
733 762 1.742308 TCAAGTAAGGCCTCAGGGTT 58.258 50.000 5.23 0.00 34.45 4.11
748 777 0.240945 GGGTTGAATGGAACGTGCAG 59.759 55.000 0.00 0.00 0.00 4.41
765 794 1.403323 GCAGCCCAACTTCTCTTATGC 59.597 52.381 0.00 0.00 0.00 3.14
881 911 2.282462 GTGGGTTCCCCTGTGCTG 60.282 66.667 5.34 0.00 45.70 4.41
1114 1166 5.288015 TGGTAACACTCGATCGTTTGTAAA 58.712 37.500 19.76 11.51 46.17 2.01
1115 1167 5.752472 TGGTAACACTCGATCGTTTGTAAAA 59.248 36.000 19.76 9.65 46.17 1.52
1116 1168 6.424509 TGGTAACACTCGATCGTTTGTAAAAT 59.575 34.615 19.76 10.31 46.17 1.82
1117 1169 7.041916 TGGTAACACTCGATCGTTTGTAAAATT 60.042 33.333 19.76 10.03 46.17 1.82
1118 1170 7.476492 GGTAACACTCGATCGTTTGTAAAATTC 59.524 37.037 19.76 6.92 0.00 2.17
1394 1450 0.249699 TACTGCCAAGGTGTCACACG 60.250 55.000 0.73 0.00 34.83 4.49
1500 1556 0.593128 ACAAGAAGCGTGCAATCACC 59.407 50.000 0.00 0.00 40.04 4.02
1567 1646 8.695456 ACAATATTTCTGTTGGTTTCAGTTTCT 58.305 29.630 0.00 0.00 34.86 2.52
1629 1710 4.899502 AGTACAAGGCCATATGCAGTATC 58.100 43.478 5.01 0.00 43.89 2.24
2195 2354 8.383175 TGTTCTTAAACCTGTCATTTCCTATCT 58.617 33.333 0.00 0.00 34.28 1.98
2310 2470 6.761714 GCTACAGCCTACAAGTATAACAATGT 59.238 38.462 0.00 0.00 34.31 2.71
2431 2591 9.685276 AAGATTTGTGTATTACATCTGGAATCA 57.315 29.630 0.00 0.00 39.48 2.57
2432 2592 9.685276 AGATTTGTGTATTACATCTGGAATCAA 57.315 29.630 0.00 0.00 39.48 2.57
2435 2595 9.513906 TTTGTGTATTACATCTGGAATCAAGAA 57.486 29.630 0.00 0.00 39.48 2.52
2436 2596 8.722480 TGTGTATTACATCTGGAATCAAGAAG 57.278 34.615 0.00 0.00 33.42 2.85
2437 2597 8.539544 TGTGTATTACATCTGGAATCAAGAAGA 58.460 33.333 0.00 0.00 33.42 2.87
2438 2598 9.383519 GTGTATTACATCTGGAATCAAGAAGAA 57.616 33.333 0.00 0.00 0.00 2.52
2440 2600 9.050601 GTATTACATCTGGAATCAAGAAGAAGG 57.949 37.037 0.00 0.00 0.00 3.46
2441 2601 4.853007 ACATCTGGAATCAAGAAGAAGGG 58.147 43.478 0.00 0.00 0.00 3.95
2442 2602 4.290722 ACATCTGGAATCAAGAAGAAGGGT 59.709 41.667 0.00 0.00 0.00 4.34
2443 2603 4.292186 TCTGGAATCAAGAAGAAGGGTG 57.708 45.455 0.00 0.00 0.00 4.61
2444 2604 3.652869 TCTGGAATCAAGAAGAAGGGTGT 59.347 43.478 0.00 0.00 0.00 4.16
2445 2605 4.104738 TCTGGAATCAAGAAGAAGGGTGTT 59.895 41.667 0.00 0.00 0.00 3.32
2446 2606 5.309543 TCTGGAATCAAGAAGAAGGGTGTTA 59.690 40.000 0.00 0.00 0.00 2.41
2447 2607 5.560724 TGGAATCAAGAAGAAGGGTGTTAG 58.439 41.667 0.00 0.00 0.00 2.34
2448 2608 4.396478 GGAATCAAGAAGAAGGGTGTTAGC 59.604 45.833 0.00 0.00 0.00 3.09
2449 2609 4.917906 ATCAAGAAGAAGGGTGTTAGCT 57.082 40.909 0.00 0.00 0.00 3.32
2450 2610 6.374417 AATCAAGAAGAAGGGTGTTAGCTA 57.626 37.500 0.00 0.00 0.00 3.32
2451 2611 5.148651 TCAAGAAGAAGGGTGTTAGCTAC 57.851 43.478 0.00 0.00 0.00 3.58
2452 2612 4.591498 TCAAGAAGAAGGGTGTTAGCTACA 59.409 41.667 0.00 0.00 0.00 2.74
2453 2613 5.071250 TCAAGAAGAAGGGTGTTAGCTACAA 59.929 40.000 0.00 0.00 38.80 2.41
2454 2614 5.763876 AGAAGAAGGGTGTTAGCTACAAT 57.236 39.130 0.00 0.00 38.80 2.71
2455 2615 5.735766 AGAAGAAGGGTGTTAGCTACAATC 58.264 41.667 0.00 0.00 38.80 2.67
2456 2616 5.248477 AGAAGAAGGGTGTTAGCTACAATCA 59.752 40.000 0.00 0.00 38.80 2.57
2457 2617 5.700402 AGAAGGGTGTTAGCTACAATCAT 57.300 39.130 0.00 0.00 38.80 2.45
2458 2618 6.067217 AGAAGGGTGTTAGCTACAATCATT 57.933 37.500 0.00 0.00 38.80 2.57
2459 2619 6.485171 AGAAGGGTGTTAGCTACAATCATTT 58.515 36.000 0.00 0.00 38.80 2.32
2460 2620 6.375455 AGAAGGGTGTTAGCTACAATCATTTG 59.625 38.462 0.00 0.00 38.80 2.32
2462 2622 5.415701 AGGGTGTTAGCTACAATCATTTGTG 59.584 40.000 0.00 0.00 45.56 3.33
2463 2623 5.183140 GGGTGTTAGCTACAATCATTTGTGT 59.817 40.000 0.00 0.00 45.56 3.72
2464 2624 6.373216 GGGTGTTAGCTACAATCATTTGTGTA 59.627 38.462 0.00 0.00 45.56 2.90
2465 2625 7.067008 GGGTGTTAGCTACAATCATTTGTGTAT 59.933 37.037 0.00 0.00 45.56 2.29
2466 2626 8.458843 GGTGTTAGCTACAATCATTTGTGTATT 58.541 33.333 0.00 0.00 45.56 1.89
2472 2632 9.618890 AGCTACAATCATTTGTGTATTACATCT 57.381 29.630 0.00 0.00 45.56 2.90
2473 2633 9.655769 GCTACAATCATTTGTGTATTACATCTG 57.344 33.333 0.00 0.00 45.56 2.90
2475 2635 8.806429 ACAATCATTTGTGTATTACATCTGGA 57.194 30.769 0.00 0.00 44.36 3.86
2476 2636 9.241919 ACAATCATTTGTGTATTACATCTGGAA 57.758 29.630 0.00 0.00 44.36 3.53
2504 2664 9.585369 AAAGAAGAAGGAGAAGATTTCTTGATT 57.415 29.630 3.68 0.00 40.27 2.57
2505 2665 8.791327 AGAAGAAGGAGAAGATTTCTTGATTC 57.209 34.615 3.68 0.00 40.27 2.52
2506 2666 7.828717 AGAAGAAGGAGAAGATTTCTTGATTCC 59.171 37.037 3.68 2.94 40.27 3.01
2508 2668 7.337938 AGAAGGAGAAGATTTCTTGATTCCTC 58.662 38.462 13.67 7.37 40.87 3.71
2509 2669 6.889595 AGGAGAAGATTTCTTGATTCCTCT 57.110 37.500 0.00 0.00 40.87 3.69
2654 2822 4.645588 GTGCCTAGACTGTAAGGTGATACT 59.354 45.833 9.65 0.00 39.30 2.12
2671 2842 6.127310 GGTGATACTTGGAGAGATGTTGTACT 60.127 42.308 0.00 0.00 0.00 2.73
2699 2870 0.106519 AGCTGGTGGTTGCTGACTTT 60.107 50.000 0.00 0.00 38.21 2.66
2705 2877 2.418609 GGTGGTTGCTGACTTTGCTTTT 60.419 45.455 0.00 0.00 0.00 2.27
2961 3134 3.524789 TGGAATGATGATGTCCAGAAGGT 59.475 43.478 0.00 0.00 36.51 3.50
2999 3172 3.384789 AGATTGCTTCAGACGCCTATACA 59.615 43.478 0.00 0.00 0.00 2.29
3039 3212 7.179338 AGACAACATAGAGAAGTACAAGATGGT 59.821 37.037 0.00 0.00 0.00 3.55
3054 3227 0.962356 ATGGTGAAGAAGGCCGCAAG 60.962 55.000 0.00 0.00 0.00 4.01
3075 3248 1.220529 CGAGCTGTCAGTGAAGCAAA 58.779 50.000 21.50 0.00 42.06 3.68
3087 3260 1.937546 GAAGCAAAGGGTCGGGCATG 61.938 60.000 0.00 0.00 0.00 4.06
3090 3263 2.035626 AAAGGGTCGGGCATGTGG 59.964 61.111 0.00 0.00 0.00 4.17
3093 3266 4.796495 GGGTCGGGCATGTGGGAC 62.796 72.222 0.00 0.00 0.00 4.46
3095 3268 3.717294 GTCGGGCATGTGGGACCT 61.717 66.667 0.00 0.00 31.91 3.85
3096 3269 3.399181 TCGGGCATGTGGGACCTC 61.399 66.667 0.00 0.00 31.91 3.85
3097 3270 3.402681 CGGGCATGTGGGACCTCT 61.403 66.667 0.00 0.00 31.91 3.69
3098 3271 2.063979 CGGGCATGTGGGACCTCTA 61.064 63.158 0.00 0.00 31.91 2.43
3163 3338 0.673437 GCCAAGATCCGAGAGAGGAG 59.327 60.000 0.00 0.00 44.55 3.69
3378 3554 2.834549 TCTGAGGTCAAGGAGGCTTTAG 59.165 50.000 0.00 0.00 0.00 1.85
3393 3569 5.892348 AGGCTTTAGAAAGGATGAAAGGAA 58.108 37.500 4.27 0.00 36.53 3.36
3394 3570 6.497640 AGGCTTTAGAAAGGATGAAAGGAAT 58.502 36.000 4.27 0.00 36.53 3.01
3405 3583 3.071874 TGAAAGGAATCAAGGCGATGT 57.928 42.857 0.00 0.00 33.40 3.06
3431 3609 5.312178 CCCTAATTGTATCCCCATTGAGGTA 59.688 44.000 0.00 0.00 34.66 3.08
3445 3623 0.831307 GAGGTATGGAAAGGCCTCGT 59.169 55.000 5.23 0.00 38.22 4.18
3628 3808 3.181456 ACAATGAAGCTATGGGAGAGAGC 60.181 47.826 0.00 0.00 36.42 4.09
3640 3820 0.251354 GAGAGAGCCATTGAGCACCA 59.749 55.000 0.00 0.00 34.23 4.17
3695 3875 0.776810 TTGGTTTCATGCCTGGGAGA 59.223 50.000 0.00 0.00 0.00 3.71
4219 4442 0.107312 CAGATGGTGCCTCAGAAGGG 60.107 60.000 0.00 0.00 43.58 3.95
4631 4857 2.590007 GCTCCAGTGCATAGCGGG 60.590 66.667 0.00 0.00 0.00 6.13
4688 4914 3.517901 AGGGTAGACCGAATTTGACATGA 59.482 43.478 0.00 0.00 46.96 3.07
4706 4932 4.159506 ACATGAGAGGAGTCTGTTAAGAGC 59.840 45.833 0.00 0.00 30.97 4.09
4748 4974 5.957771 TCACCAAAGAACTAGCTATGGAT 57.042 39.130 14.35 0.00 0.00 3.41
4969 5195 4.906747 ATCAGAAAGGCTGGAGATATCC 57.093 45.455 0.00 0.00 44.98 2.59
5083 5309 0.162507 CAACGCTCTGTTTGCTCGAG 59.837 55.000 8.45 8.45 39.29 4.04
5245 5472 7.440523 ACATCTGCTTTCCTTGTTAACTAAG 57.559 36.000 7.22 8.63 0.00 2.18
5246 5473 5.941948 TCTGCTTTCCTTGTTAACTAAGC 57.058 39.130 7.22 13.02 38.68 3.09
5269 5496 6.255887 AGCGTGTTAGTTACTATTTGATCTGC 59.744 38.462 0.00 0.00 0.00 4.26
5309 5536 7.278868 ACACTAGCATTGTCTTACTGCTTAATC 59.721 37.037 1.21 0.00 43.44 1.75
5339 5566 1.068333 CGCTAGCAACAAACCTGCATT 60.068 47.619 16.45 0.00 42.48 3.56
5460 5687 8.616598 TCATCCAGGTAAGGGTTAAATCTTTTA 58.383 33.333 0.00 0.00 0.00 1.52
5516 5743 4.459337 AGCCAAGTTGTAGACCTTTTATGC 59.541 41.667 1.45 0.00 0.00 3.14
5523 5750 7.341805 AGTTGTAGACCTTTTATGCTGATCAT 58.658 34.615 0.00 0.00 39.17 2.45
5567 5794 1.742308 TGGAGTAAGCCAGGGACTTT 58.258 50.000 0.00 0.00 34.60 2.66
5636 5863 4.453136 TGTTAACCATGTACGGAAAAGAGC 59.547 41.667 2.48 0.00 0.00 4.09
5739 6059 5.774690 TGTTCCTTTTGTTATTGCTCTGGAT 59.225 36.000 0.00 0.00 0.00 3.41
5785 6107 6.204882 ACACAAAGCAGTAGAACATTTACTCC 59.795 38.462 0.00 0.00 0.00 3.85
5840 6164 5.106118 GGCTCCAACATTTTCTAGAACTTCC 60.106 44.000 4.18 0.00 0.00 3.46
5914 6238 4.342951 ACATATTGCTTGTTGGGGATGATG 59.657 41.667 0.00 0.00 0.00 3.07
5916 6240 0.324552 TGCTTGTTGGGGATGATGGG 60.325 55.000 0.00 0.00 0.00 4.00
5978 6391 5.391203 CGTGGTAACTGTTAAACAATAGGGC 60.391 44.000 1.10 0.00 37.61 5.19
5979 6392 5.474189 GTGGTAACTGTTAAACAATAGGGCA 59.526 40.000 1.10 0.00 37.61 5.36
5980 6393 6.152154 GTGGTAACTGTTAAACAATAGGGCAT 59.848 38.462 1.10 0.00 37.61 4.40
5981 6394 7.337436 GTGGTAACTGTTAAACAATAGGGCATA 59.663 37.037 1.10 0.00 37.61 3.14
6087 6510 3.449227 CACTCGCGTAGGCCAGGA 61.449 66.667 5.01 0.00 30.93 3.86
6092 6515 2.711922 CGCGTAGGCCAGGACTCTT 61.712 63.158 0.00 0.00 35.02 2.85
6207 6630 1.326548 AGCGAACGTTTGTGTCACTTC 59.673 47.619 16.75 0.00 0.00 3.01
6281 6706 4.386652 CAGCCATTAAAACATCTGTTGCAC 59.613 41.667 0.00 0.00 38.44 4.57
6554 6984 1.935873 CAGTATGGTGACCTCATTGCG 59.064 52.381 2.11 0.00 0.00 4.85
6572 7002 7.047891 TCATTGCGTAAATAAGACATCCTTCT 58.952 34.615 0.00 0.00 36.34 2.85
6678 7108 2.054232 TCCATCGAGGAGTACAGACC 57.946 55.000 0.00 0.00 43.07 3.85
6844 7275 9.453572 GCCATGGAAATATCACTTGATAATCTA 57.546 33.333 18.40 4.14 40.09 1.98
7116 7547 1.431195 TAACCAGGGGAAGGCAGCAA 61.431 55.000 0.00 0.00 0.00 3.91
7238 7669 7.173218 TCAGAACCTAAAACAGCAATAAGTCTG 59.827 37.037 0.00 0.00 36.45 3.51
7289 7738 6.631016 TCCACTAATAGACTGTACTTGCAAG 58.369 40.000 24.84 24.84 0.00 4.01
7310 7763 6.206634 GCAAGCATTATAGGCAGTTAACCATA 59.793 38.462 0.88 0.00 0.00 2.74
7316 7769 9.453572 CATTATAGGCAGTTAACCATATCATGT 57.546 33.333 0.88 0.00 0.00 3.21
7317 7770 8.846943 TTATAGGCAGTTAACCATATCATGTG 57.153 34.615 0.88 0.00 0.00 3.21
7454 7907 2.365617 GCGAGGGAAGATAGAACATGGA 59.634 50.000 0.00 0.00 0.00 3.41
7491 7944 2.171840 CTCACGGAGAAAGAGGAGGAA 58.828 52.381 0.00 0.00 0.00 3.36
7655 8110 9.678260 GTTTTCCATGCCTATATGAGAAGATAT 57.322 33.333 0.00 0.00 0.00 1.63
7686 8141 3.748048 CGAATGGAAAGTGTCTCATGTGT 59.252 43.478 0.00 0.00 0.00 3.72
7687 8142 4.143030 CGAATGGAAAGTGTCTCATGTGTC 60.143 45.833 0.00 0.00 0.00 3.67
7697 8152 2.992543 GTCTCATGTGTCTCTCTGTTGC 59.007 50.000 0.00 0.00 0.00 4.17
7718 8173 1.217001 CCTTTTTCTTTTGCCGCACC 58.783 50.000 0.00 0.00 0.00 5.01
7753 8208 3.430218 CACTCTGAACTGAAATCGGTCAC 59.570 47.826 0.00 0.00 33.61 3.67
7802 8257 3.496870 GCCTGCTTACTTAGGGCATGTAT 60.497 47.826 0.00 0.00 42.08 2.29
7814 8269 2.689983 GGGCATGTATAATGCATAGCCC 59.310 50.000 19.36 19.36 46.21 5.19
7823 8278 1.070127 ATGCATAGCCCCAGGGTGAT 61.070 55.000 4.22 0.00 37.65 3.06
7826 8281 1.386485 ATAGCCCCAGGGTGATGCT 60.386 57.895 11.42 11.42 37.65 3.79
7827 8282 1.422161 ATAGCCCCAGGGTGATGCTC 61.422 60.000 10.11 0.00 37.65 4.26
7829 8284 4.181010 CCCCAGGGTGATGCTCCG 62.181 72.222 4.22 0.00 0.00 4.63
7830 8285 3.402681 CCCAGGGTGATGCTCCGT 61.403 66.667 0.00 0.00 0.00 4.69
7835 8290 1.050988 AGGGTGATGCTCCGTATGCT 61.051 55.000 0.00 0.00 0.00 3.79
7863 8318 7.946219 TGTAGGATCGGATATCAGGTAAAGTAA 59.054 37.037 4.83 0.00 0.00 2.24
7874 8329 7.893124 ATCAGGTAAAGTAAGTTCGGATAGA 57.107 36.000 0.00 0.00 0.00 1.98
7881 8336 4.197750 AGTAAGTTCGGATAGAGAAGCGA 58.802 43.478 0.00 0.00 0.00 4.93
7886 8341 2.428491 TCGGATAGAGAAGCGAGATCC 58.572 52.381 0.00 0.00 33.99 3.36
7888 8343 2.817258 CGGATAGAGAAGCGAGATCCTT 59.183 50.000 0.00 0.00 34.99 3.36
7894 8349 1.552337 AGAAGCGAGATCCTTTGCAGA 59.448 47.619 0.00 0.00 0.00 4.26
7898 8353 1.677217 GCGAGATCCTTTGCAGAAGGT 60.677 52.381 20.22 11.97 38.55 3.50
7908 8363 1.228245 GCAGAAGGTGGGTGCTTGA 60.228 57.895 0.00 0.00 34.23 3.02
7945 8400 3.129638 TCCGGTGTCAAAAGTTGAAAAGG 59.870 43.478 0.00 0.00 42.15 3.11
7958 8413 3.799281 TGAAAAGGTTGGAGTGCAAAG 57.201 42.857 0.00 0.00 0.00 2.77
7975 8430 5.430886 TGCAAAGTAGAGATGCATGTGTAT 58.569 37.500 2.46 0.00 44.52 2.29
7977 8432 7.047271 TGCAAAGTAGAGATGCATGTGTATTA 58.953 34.615 2.46 0.00 44.52 0.98
7979 8434 7.439356 GCAAAGTAGAGATGCATGTGTATTAGA 59.561 37.037 2.46 0.00 39.81 2.10
7983 8438 6.975196 AGAGATGCATGTGTATTAGAGTCT 57.025 37.500 2.46 0.00 0.00 3.24
7984 8439 7.358770 AGAGATGCATGTGTATTAGAGTCTT 57.641 36.000 2.46 0.00 0.00 3.01
7985 8440 7.790027 AGAGATGCATGTGTATTAGAGTCTTT 58.210 34.615 2.46 0.00 0.00 2.52
7986 8441 8.918116 AGAGATGCATGTGTATTAGAGTCTTTA 58.082 33.333 2.46 0.00 0.00 1.85
7987 8442 9.703892 GAGATGCATGTGTATTAGAGTCTTTAT 57.296 33.333 2.46 0.00 0.00 1.40
8005 8460 9.384764 AGTCTTTATTTTATACTCCTGTGAAGC 57.615 33.333 0.00 0.00 0.00 3.86
8006 8461 8.613482 GTCTTTATTTTATACTCCTGTGAAGCC 58.387 37.037 0.00 0.00 0.00 4.35
8007 8462 7.773690 TCTTTATTTTATACTCCTGTGAAGCCC 59.226 37.037 0.00 0.00 0.00 5.19
8008 8463 5.717119 ATTTTATACTCCTGTGAAGCCCT 57.283 39.130 0.00 0.00 0.00 5.19
8009 8464 4.487714 TTTATACTCCTGTGAAGCCCTG 57.512 45.455 0.00 0.00 0.00 4.45
8010 8465 1.958288 ATACTCCTGTGAAGCCCTGT 58.042 50.000 0.00 0.00 0.00 4.00
8011 8466 0.976641 TACTCCTGTGAAGCCCTGTG 59.023 55.000 0.00 0.00 0.00 3.66
8012 8467 1.056700 ACTCCTGTGAAGCCCTGTGT 61.057 55.000 0.00 0.00 0.00 3.72
8013 8468 0.976641 CTCCTGTGAAGCCCTGTGTA 59.023 55.000 0.00 0.00 0.00 2.90
8014 8469 1.556911 CTCCTGTGAAGCCCTGTGTAT 59.443 52.381 0.00 0.00 0.00 2.29
8015 8470 1.985159 TCCTGTGAAGCCCTGTGTATT 59.015 47.619 0.00 0.00 0.00 1.89
8016 8471 3.178046 TCCTGTGAAGCCCTGTGTATTA 58.822 45.455 0.00 0.00 0.00 0.98
8017 8472 3.197766 TCCTGTGAAGCCCTGTGTATTAG 59.802 47.826 0.00 0.00 0.00 1.73
8018 8473 3.197766 CCTGTGAAGCCCTGTGTATTAGA 59.802 47.826 0.00 0.00 0.00 2.10
8019 8474 4.437239 CTGTGAAGCCCTGTGTATTAGAG 58.563 47.826 0.00 0.00 0.00 2.43
8020 8475 3.838317 TGTGAAGCCCTGTGTATTAGAGT 59.162 43.478 0.00 0.00 0.00 3.24
8021 8476 4.286032 TGTGAAGCCCTGTGTATTAGAGTT 59.714 41.667 0.00 0.00 0.00 3.01
8061 8516 0.455005 GAGGCCCACGTGTACTAGTC 59.545 60.000 15.65 0.00 0.00 2.59
8104 8559 1.587547 GCCCACTAGTGATAGCTTGC 58.412 55.000 24.68 10.38 0.00 4.01
8107 8562 3.397482 CCCACTAGTGATAGCTTGCATC 58.603 50.000 24.68 0.00 0.00 3.91
8111 8566 1.123077 AGTGATAGCTTGCATCGGGA 58.877 50.000 0.00 0.00 0.00 5.14
8112 8567 1.069823 AGTGATAGCTTGCATCGGGAG 59.930 52.381 0.00 0.00 0.00 4.30
8113 8568 1.069204 GTGATAGCTTGCATCGGGAGA 59.931 52.381 0.00 0.00 46.90 3.71
8115 8570 2.170397 TGATAGCTTGCATCGGGAGAAA 59.830 45.455 0.00 0.00 45.37 2.52
8116 8571 2.779755 TAGCTTGCATCGGGAGAAAA 57.220 45.000 0.00 0.00 45.37 2.29
8157 8612 5.534654 CCTCAAACTACTTTTTGTCATGGGA 59.465 40.000 0.00 0.00 37.66 4.37
8173 8628 2.849942 TGGGACATCTGTGTTGAGTTG 58.150 47.619 0.00 0.00 39.09 3.16
8174 8629 2.172505 TGGGACATCTGTGTTGAGTTGT 59.827 45.455 0.00 0.00 39.09 3.32
8175 8630 3.389656 TGGGACATCTGTGTTGAGTTGTA 59.610 43.478 0.00 0.00 39.09 2.41
8176 8631 3.746492 GGGACATCTGTGTTGAGTTGTAC 59.254 47.826 0.00 0.00 39.09 2.90
8177 8632 4.503296 GGGACATCTGTGTTGAGTTGTACT 60.503 45.833 0.00 0.00 39.09 2.73
8178 8633 5.057149 GGACATCTGTGTTGAGTTGTACTT 58.943 41.667 0.00 0.00 39.09 2.24
8179 8634 5.527582 GGACATCTGTGTTGAGTTGTACTTT 59.472 40.000 0.00 0.00 39.09 2.66
8180 8635 6.704493 GGACATCTGTGTTGAGTTGTACTTTA 59.296 38.462 0.00 0.00 39.09 1.85
8181 8636 7.387948 GGACATCTGTGTTGAGTTGTACTTTAT 59.612 37.037 0.00 0.00 39.09 1.40
8182 8637 8.087982 ACATCTGTGTTGAGTTGTACTTTATG 57.912 34.615 0.00 0.00 34.01 1.90
8183 8638 7.715249 ACATCTGTGTTGAGTTGTACTTTATGT 59.285 33.333 0.00 0.00 34.01 2.29
8184 8639 8.559536 CATCTGTGTTGAGTTGTACTTTATGTT 58.440 33.333 0.00 0.00 0.00 2.71
8185 8640 7.915508 TCTGTGTTGAGTTGTACTTTATGTTG 58.084 34.615 0.00 0.00 0.00 3.33
8186 8641 6.491394 TGTGTTGAGTTGTACTTTATGTTGC 58.509 36.000 0.00 0.00 0.00 4.17
8187 8642 6.094186 TGTGTTGAGTTGTACTTTATGTTGCA 59.906 34.615 0.00 0.00 0.00 4.08
8188 8643 7.138736 GTGTTGAGTTGTACTTTATGTTGCAT 58.861 34.615 0.00 0.00 0.00 3.96
8189 8644 7.113404 GTGTTGAGTTGTACTTTATGTTGCATG 59.887 37.037 0.00 0.00 0.00 4.06
8190 8645 6.875948 TGAGTTGTACTTTATGTTGCATGT 57.124 33.333 0.00 0.00 0.00 3.21
8191 8646 7.971183 TGAGTTGTACTTTATGTTGCATGTA 57.029 32.000 0.00 0.00 0.00 2.29
8192 8647 8.560355 TGAGTTGTACTTTATGTTGCATGTAT 57.440 30.769 0.00 0.00 0.00 2.29
8193 8648 9.008965 TGAGTTGTACTTTATGTTGCATGTATT 57.991 29.630 0.00 0.00 0.00 1.89
8196 8651 9.205916 GTTGTACTTTATGTTGCATGTATTACG 57.794 33.333 0.00 0.00 0.00 3.18
8197 8652 8.481974 TGTACTTTATGTTGCATGTATTACGT 57.518 30.769 0.00 0.00 0.00 3.57
8198 8653 8.384365 TGTACTTTATGTTGCATGTATTACGTG 58.616 33.333 11.03 11.03 38.13 4.49
8199 8654 7.372451 ACTTTATGTTGCATGTATTACGTGT 57.628 32.000 15.60 0.85 37.43 4.49
8200 8655 7.812648 ACTTTATGTTGCATGTATTACGTGTT 58.187 30.769 15.60 0.00 37.43 3.32
8201 8656 7.960738 ACTTTATGTTGCATGTATTACGTGTTC 59.039 33.333 15.60 8.36 37.43 3.18
8202 8657 7.603963 TTATGTTGCATGTATTACGTGTTCT 57.396 32.000 15.60 2.46 37.43 3.01
8203 8658 5.276240 TGTTGCATGTATTACGTGTTCTG 57.724 39.130 15.60 0.00 37.43 3.02
8204 8659 4.153296 TGTTGCATGTATTACGTGTTCTGG 59.847 41.667 15.60 0.00 37.43 3.86
8205 8660 2.675844 TGCATGTATTACGTGTTCTGGC 59.324 45.455 15.60 3.15 37.43 4.85
8206 8661 2.031683 GCATGTATTACGTGTTCTGGCC 59.968 50.000 15.60 0.00 37.43 5.36
8207 8662 2.389962 TGTATTACGTGTTCTGGCCC 57.610 50.000 0.00 0.00 0.00 5.80
8208 8663 1.624312 TGTATTACGTGTTCTGGCCCA 59.376 47.619 0.00 0.00 0.00 5.36
8209 8664 2.004733 GTATTACGTGTTCTGGCCCAC 58.995 52.381 0.00 0.00 0.00 4.61
8210 8665 0.322187 ATTACGTGTTCTGGCCCACC 60.322 55.000 0.00 0.00 0.00 4.61
8211 8666 1.412453 TTACGTGTTCTGGCCCACCT 61.412 55.000 0.00 0.00 36.63 4.00
8212 8667 1.823169 TACGTGTTCTGGCCCACCTC 61.823 60.000 0.00 0.00 36.63 3.85
8213 8668 2.034221 GTGTTCTGGCCCACCTCC 59.966 66.667 0.00 0.00 36.63 4.30
8214 8669 2.121963 TGTTCTGGCCCACCTCCT 60.122 61.111 0.00 0.00 36.63 3.69
8215 8670 1.159905 TGTTCTGGCCCACCTCCTA 59.840 57.895 0.00 0.00 36.63 2.94
8216 8671 0.909610 TGTTCTGGCCCACCTCCTAG 60.910 60.000 0.00 0.00 36.63 3.02
8217 8672 0.910088 GTTCTGGCCCACCTCCTAGT 60.910 60.000 0.00 0.00 36.63 2.57
8218 8673 0.178873 TTCTGGCCCACCTCCTAGTT 60.179 55.000 0.00 0.00 36.63 2.24
8219 8674 0.909610 TCTGGCCCACCTCCTAGTTG 60.910 60.000 0.00 0.00 36.63 3.16
8220 8675 1.151899 TGGCCCACCTCCTAGTTGT 60.152 57.895 0.00 0.00 36.63 3.32
8221 8676 0.117541 TGGCCCACCTCCTAGTTGTA 59.882 55.000 0.00 0.00 36.63 2.41
8222 8677 1.274184 TGGCCCACCTCCTAGTTGTAT 60.274 52.381 0.00 0.00 36.63 2.29
8223 8678 2.022820 TGGCCCACCTCCTAGTTGTATA 60.023 50.000 0.00 0.00 36.63 1.47
8224 8679 3.248888 GGCCCACCTCCTAGTTGTATAT 58.751 50.000 0.00 0.00 0.00 0.86
8225 8680 4.140639 TGGCCCACCTCCTAGTTGTATATA 60.141 45.833 0.00 0.00 36.63 0.86
8226 8681 4.466726 GGCCCACCTCCTAGTTGTATATAG 59.533 50.000 0.00 0.00 0.00 1.31
8227 8682 5.085219 GCCCACCTCCTAGTTGTATATAGT 58.915 45.833 0.00 0.00 0.00 2.12
8228 8683 5.543020 GCCCACCTCCTAGTTGTATATAGTT 59.457 44.000 0.00 0.00 0.00 2.24
8229 8684 6.518537 GCCCACCTCCTAGTTGTATATAGTTG 60.519 46.154 0.00 0.00 0.00 3.16
8230 8685 6.781014 CCCACCTCCTAGTTGTATATAGTTGA 59.219 42.308 0.00 0.00 0.00 3.18
8231 8686 7.039644 CCCACCTCCTAGTTGTATATAGTTGAG 60.040 44.444 0.00 0.00 0.00 3.02
8232 8687 7.039644 CCACCTCCTAGTTGTATATAGTTGAGG 60.040 44.444 0.00 0.00 41.08 3.86
8233 8688 7.593653 ACCTCCTAGTTGTATATAGTTGAGGT 58.406 38.462 0.00 0.00 42.91 3.85
8234 8689 8.066247 ACCTCCTAGTTGTATATAGTTGAGGTT 58.934 37.037 0.00 0.00 44.75 3.50
8235 8690 8.361139 CCTCCTAGTTGTATATAGTTGAGGTTG 58.639 40.741 0.00 0.00 32.82 3.77
8236 8691 9.132923 CTCCTAGTTGTATATAGTTGAGGTTGA 57.867 37.037 0.00 0.00 0.00 3.18
8237 8692 9.132923 TCCTAGTTGTATATAGTTGAGGTTGAG 57.867 37.037 0.00 0.00 0.00 3.02
8238 8693 8.361139 CCTAGTTGTATATAGTTGAGGTTGAGG 58.639 40.741 0.00 0.00 0.00 3.86
8239 8694 6.583562 AGTTGTATATAGTTGAGGTTGAGGC 58.416 40.000 0.00 0.00 0.00 4.70
8240 8695 5.546621 TGTATATAGTTGAGGTTGAGGCC 57.453 43.478 0.00 0.00 0.00 5.19
8241 8696 5.216622 TGTATATAGTTGAGGTTGAGGCCT 58.783 41.667 3.86 3.86 42.53 5.19
8242 8697 6.378745 TGTATATAGTTGAGGTTGAGGCCTA 58.621 40.000 4.42 0.00 39.34 3.93
8243 8698 5.810080 ATATAGTTGAGGTTGAGGCCTAC 57.190 43.478 4.42 0.00 39.34 3.18
8244 8699 0.984995 AGTTGAGGTTGAGGCCTACC 59.015 55.000 16.00 16.00 39.34 3.18
8245 8700 0.035343 GTTGAGGTTGAGGCCTACCC 60.035 60.000 19.46 13.07 39.34 3.69
8247 8702 0.714180 TGAGGTTGAGGCCTACCCTA 59.286 55.000 19.46 7.60 46.60 3.53
8248 8703 1.294068 TGAGGTTGAGGCCTACCCTAT 59.706 52.381 19.46 3.03 46.60 2.57
8249 8704 2.520980 TGAGGTTGAGGCCTACCCTATA 59.479 50.000 19.46 8.60 46.60 1.31
8250 8705 2.898612 GAGGTTGAGGCCTACCCTATAC 59.101 54.545 19.46 4.15 46.60 1.47
8251 8706 2.523138 AGGTTGAGGCCTACCCTATACT 59.477 50.000 19.46 0.00 46.60 2.12
8252 8707 3.051264 AGGTTGAGGCCTACCCTATACTT 60.051 47.826 19.46 0.00 46.60 2.24
8253 8708 4.171442 AGGTTGAGGCCTACCCTATACTTA 59.829 45.833 19.46 0.00 46.60 2.24
8254 8709 5.092259 GGTTGAGGCCTACCCTATACTTAT 58.908 45.833 13.16 0.00 46.60 1.73
8255 8710 6.047599 AGGTTGAGGCCTACCCTATACTTATA 59.952 42.308 19.46 0.00 46.60 0.98
8256 8711 6.154192 GGTTGAGGCCTACCCTATACTTATAC 59.846 46.154 13.16 0.00 46.60 1.47
8257 8712 6.473429 TGAGGCCTACCCTATACTTATACA 57.527 41.667 4.42 0.00 46.60 2.29
8258 8713 7.052901 TGAGGCCTACCCTATACTTATACAT 57.947 40.000 4.42 0.00 46.60 2.29
8259 8714 8.178662 TGAGGCCTACCCTATACTTATACATA 57.821 38.462 4.42 0.00 46.60 2.29
8260 8715 8.057623 TGAGGCCTACCCTATACTTATACATAC 58.942 40.741 4.42 0.00 46.60 2.39
8261 8716 7.947484 AGGCCTACCCTATACTTATACATACA 58.053 38.462 1.29 0.00 44.08 2.29
8262 8717 8.575733 AGGCCTACCCTATACTTATACATACAT 58.424 37.037 1.29 0.00 44.08 2.29
8263 8718 8.639761 GGCCTACCCTATACTTATACATACATG 58.360 40.741 0.00 0.00 0.00 3.21
8264 8719 8.142551 GCCTACCCTATACTTATACATACATGC 58.857 40.741 0.00 0.00 0.00 4.06
8265 8720 8.350722 CCTACCCTATACTTATACATACATGCG 58.649 40.741 0.00 0.00 0.00 4.73
8266 8721 6.570692 ACCCTATACTTATACATACATGCGC 58.429 40.000 0.00 0.00 0.00 6.09
8267 8722 5.983720 CCCTATACTTATACATACATGCGCC 59.016 44.000 4.18 0.00 0.00 6.53
8268 8723 6.406512 CCCTATACTTATACATACATGCGCCA 60.407 42.308 4.18 0.00 0.00 5.69
8269 8724 6.697455 CCTATACTTATACATACATGCGCCAG 59.303 42.308 4.18 0.00 0.00 4.85
8270 8725 3.067106 ACTTATACATACATGCGCCAGC 58.933 45.455 4.18 0.00 45.41 4.85
8281 8736 3.136123 CGCCAGCACCCCATCAAG 61.136 66.667 0.00 0.00 0.00 3.02
8282 8737 2.356278 GCCAGCACCCCATCAAGA 59.644 61.111 0.00 0.00 0.00 3.02
8283 8738 2.048603 GCCAGCACCCCATCAAGAC 61.049 63.158 0.00 0.00 0.00 3.01
8284 8739 1.379916 CCAGCACCCCATCAAGACA 59.620 57.895 0.00 0.00 0.00 3.41
8285 8740 0.251297 CCAGCACCCCATCAAGACAA 60.251 55.000 0.00 0.00 0.00 3.18
8286 8741 0.883833 CAGCACCCCATCAAGACAAC 59.116 55.000 0.00 0.00 0.00 3.32
8287 8742 0.606401 AGCACCCCATCAAGACAACG 60.606 55.000 0.00 0.00 0.00 4.10
8288 8743 0.605319 GCACCCCATCAAGACAACGA 60.605 55.000 0.00 0.00 0.00 3.85
8289 8744 1.950484 GCACCCCATCAAGACAACGAT 60.950 52.381 0.00 0.00 0.00 3.73
8290 8745 2.436417 CACCCCATCAAGACAACGATT 58.564 47.619 0.00 0.00 0.00 3.34
8291 8746 3.605634 CACCCCATCAAGACAACGATTA 58.394 45.455 0.00 0.00 0.00 1.75
8292 8747 4.199310 CACCCCATCAAGACAACGATTAT 58.801 43.478 0.00 0.00 0.00 1.28
8293 8748 4.640201 CACCCCATCAAGACAACGATTATT 59.360 41.667 0.00 0.00 0.00 1.40
8294 8749 4.640201 ACCCCATCAAGACAACGATTATTG 59.360 41.667 0.00 0.00 35.59 1.90
8295 8750 4.640201 CCCCATCAAGACAACGATTATTGT 59.360 41.667 0.00 0.00 45.52 2.71
8296 8751 5.820423 CCCCATCAAGACAACGATTATTGTA 59.180 40.000 0.00 0.00 42.89 2.41
8297 8752 6.486657 CCCCATCAAGACAACGATTATTGTAT 59.513 38.462 0.00 0.00 42.89 2.29
8298 8753 7.013274 CCCCATCAAGACAACGATTATTGTATT 59.987 37.037 0.00 0.00 43.05 1.89
8305 8760 8.447787 AGACAACGATTATTGTATTGCAAAAC 57.552 30.769 1.71 0.00 42.89 2.43
8306 8761 8.079203 AGACAACGATTATTGTATTGCAAAACA 58.921 29.630 1.71 0.00 42.89 2.83
8307 8762 8.755696 ACAACGATTATTGTATTGCAAAACAT 57.244 26.923 1.71 0.00 41.04 2.71
8308 8763 8.859156 ACAACGATTATTGTATTGCAAAACATC 58.141 29.630 1.71 0.00 41.04 3.06
8309 8764 9.075519 CAACGATTATTGTATTGCAAAACATCT 57.924 29.630 1.71 0.00 40.91 2.90
8310 8765 8.841444 ACGATTATTGTATTGCAAAACATCTC 57.159 30.769 1.71 0.00 40.91 2.75
8311 8766 8.677300 ACGATTATTGTATTGCAAAACATCTCT 58.323 29.630 1.71 0.00 40.91 3.10
8312 8767 9.162793 CGATTATTGTATTGCAAAACATCTCTC 57.837 33.333 1.71 0.00 40.91 3.20
8316 8771 7.977789 TTGTATTGCAAAACATCTCTCTACA 57.022 32.000 1.71 0.33 33.53 2.74
8317 8772 8.565896 TTGTATTGCAAAACATCTCTCTACAT 57.434 30.769 1.71 0.00 33.53 2.29
8318 8773 7.977904 TGTATTGCAAAACATCTCTCTACATG 58.022 34.615 1.71 0.00 0.00 3.21
8319 8774 5.885230 TTGCAAAACATCTCTCTACATGG 57.115 39.130 0.00 0.00 0.00 3.66
8320 8775 4.910195 TGCAAAACATCTCTCTACATGGT 58.090 39.130 0.00 0.00 0.00 3.55
8321 8776 6.048732 TGCAAAACATCTCTCTACATGGTA 57.951 37.500 0.00 0.00 0.00 3.25
8322 8777 6.653020 TGCAAAACATCTCTCTACATGGTAT 58.347 36.000 0.00 0.00 0.00 2.73
8323 8778 7.112122 TGCAAAACATCTCTCTACATGGTATT 58.888 34.615 0.00 0.00 0.00 1.89
8324 8779 8.264347 TGCAAAACATCTCTCTACATGGTATTA 58.736 33.333 0.00 0.00 0.00 0.98
8325 8780 9.109393 GCAAAACATCTCTCTACATGGTATTAA 57.891 33.333 0.00 0.00 0.00 1.40
8328 8783 9.698309 AAACATCTCTCTACATGGTATTAATCG 57.302 33.333 0.00 0.00 0.00 3.34
8329 8784 7.316640 ACATCTCTCTACATGGTATTAATCGC 58.683 38.462 0.00 0.00 0.00 4.58
8330 8785 6.894339 TCTCTCTACATGGTATTAATCGCA 57.106 37.500 0.00 0.00 0.00 5.10
8331 8786 7.284919 TCTCTCTACATGGTATTAATCGCAA 57.715 36.000 0.00 0.00 0.00 4.85
8332 8787 7.371159 TCTCTCTACATGGTATTAATCGCAAG 58.629 38.462 0.00 0.00 0.00 4.01
8333 8788 7.014326 TCTCTCTACATGGTATTAATCGCAAGT 59.986 37.037 0.00 0.00 39.48 3.16
8334 8789 7.145985 TCTCTACATGGTATTAATCGCAAGTC 58.854 38.462 0.00 0.00 39.48 3.01
8335 8790 5.918576 TCTACATGGTATTAATCGCAAGTCG 59.081 40.000 0.00 0.00 40.15 4.18
8345 8800 0.458669 TCGCAAGTCGATCCTAACCC 59.541 55.000 0.00 0.00 43.16 4.11
8346 8801 0.460311 CGCAAGTCGATCCTAACCCT 59.540 55.000 0.00 0.00 41.67 4.34
8347 8802 1.679680 CGCAAGTCGATCCTAACCCTA 59.320 52.381 0.00 0.00 41.67 3.53
8348 8803 2.287668 CGCAAGTCGATCCTAACCCTAG 60.288 54.545 0.00 0.00 41.67 3.02
8349 8804 2.546162 GCAAGTCGATCCTAACCCTAGC 60.546 54.545 0.00 0.00 0.00 3.42
8350 8805 2.959707 CAAGTCGATCCTAACCCTAGCT 59.040 50.000 0.00 0.00 0.00 3.32
8351 8806 4.142790 CAAGTCGATCCTAACCCTAGCTA 58.857 47.826 0.00 0.00 0.00 3.32
8352 8807 4.023726 AGTCGATCCTAACCCTAGCTAG 57.976 50.000 14.20 14.20 0.00 3.42
8353 8808 2.488937 GTCGATCCTAACCCTAGCTAGC 59.511 54.545 15.74 6.62 0.00 3.42
8354 8809 1.819903 CGATCCTAACCCTAGCTAGCC 59.180 57.143 15.74 0.00 0.00 3.93
8355 8810 1.819903 GATCCTAACCCTAGCTAGCCG 59.180 57.143 15.74 9.63 0.00 5.52
8356 8811 0.826672 TCCTAACCCTAGCTAGCCGC 60.827 60.000 15.74 0.00 39.57 6.53
8357 8812 1.666580 CTAACCCTAGCTAGCCGCC 59.333 63.158 15.74 0.00 40.39 6.13
8358 8813 1.817911 CTAACCCTAGCTAGCCGCCC 61.818 65.000 15.74 0.00 40.39 6.13
8410 8865 2.215907 CGCAGGTCTTATCCTCTGTG 57.784 55.000 0.00 0.00 35.37 3.66
8411 8866 1.804372 CGCAGGTCTTATCCTCTGTGC 60.804 57.143 0.00 0.00 35.37 4.57
8412 8867 1.804372 GCAGGTCTTATCCTCTGTGCG 60.804 57.143 0.00 0.00 35.37 5.34
8413 8868 1.478510 CAGGTCTTATCCTCTGTGCGT 59.521 52.381 0.00 0.00 35.37 5.24
8414 8869 1.751924 AGGTCTTATCCTCTGTGCGTC 59.248 52.381 0.00 0.00 31.32 5.19
8415 8870 1.534175 GGTCTTATCCTCTGTGCGTCG 60.534 57.143 0.00 0.00 0.00 5.12
8416 8871 0.100682 TCTTATCCTCTGTGCGTCGC 59.899 55.000 11.10 11.10 0.00 5.19
8417 8872 0.101399 CTTATCCTCTGTGCGTCGCT 59.899 55.000 19.50 0.00 0.00 4.93
8418 8873 0.179137 TTATCCTCTGTGCGTCGCTG 60.179 55.000 19.50 8.79 0.00 5.18
8419 8874 2.613739 TATCCTCTGTGCGTCGCTGC 62.614 60.000 19.50 11.74 0.00 5.25
8420 8875 4.731612 CCTCTGTGCGTCGCTGCT 62.732 66.667 19.50 0.00 35.36 4.24
8421 8876 3.476646 CTCTGTGCGTCGCTGCTG 61.477 66.667 19.50 14.34 35.36 4.41
8422 8877 4.284860 TCTGTGCGTCGCTGCTGT 62.285 61.111 19.50 0.00 35.36 4.40
8423 8878 3.771491 CTGTGCGTCGCTGCTGTC 61.771 66.667 19.50 2.93 35.36 3.51
8434 8889 2.031012 TGCTGTCGCAGGTCCTTG 59.969 61.111 8.57 0.00 42.25 3.61
8435 8890 3.426568 GCTGTCGCAGGTCCTTGC 61.427 66.667 8.57 0.00 40.67 4.01
8436 8891 2.743928 CTGTCGCAGGTCCTTGCC 60.744 66.667 7.48 0.00 41.01 4.52
8437 8892 4.680237 TGTCGCAGGTCCTTGCCG 62.680 66.667 7.48 3.15 41.01 5.69
8458 8913 4.708968 CCGCCGCGCTCTATCCTC 62.709 72.222 7.42 0.00 0.00 3.71
8459 8914 4.708968 CGCCGCGCTCTATCCTCC 62.709 72.222 5.56 0.00 0.00 4.30
8460 8915 4.365505 GCCGCGCTCTATCCTCCC 62.366 72.222 5.56 0.00 0.00 4.30
8461 8916 4.044484 CCGCGCTCTATCCTCCCG 62.044 72.222 5.56 0.00 0.00 5.14
8462 8917 4.708968 CGCGCTCTATCCTCCCGC 62.709 72.222 5.56 0.00 41.10 6.13
8463 8918 4.365505 GCGCTCTATCCTCCCGCC 62.366 72.222 0.00 0.00 38.84 6.13
8464 8919 2.912542 CGCTCTATCCTCCCGCCA 60.913 66.667 0.00 0.00 0.00 5.69
8465 8920 2.737830 GCTCTATCCTCCCGCCAC 59.262 66.667 0.00 0.00 0.00 5.01
8466 8921 2.873525 GCTCTATCCTCCCGCCACC 61.874 68.421 0.00 0.00 0.00 4.61
8467 8922 2.520982 TCTATCCTCCCGCCACCG 60.521 66.667 0.00 0.00 0.00 4.94
8468 8923 4.301027 CTATCCTCCCGCCACCGC 62.301 72.222 0.00 0.00 0.00 5.68
8504 8959 4.996434 CCGCCGCTCATCCCCATC 62.996 72.222 0.00 0.00 0.00 3.51
8507 8962 3.933722 CCGCTCATCCCCATCGCT 61.934 66.667 0.00 0.00 0.00 4.93
8508 8963 2.664185 CGCTCATCCCCATCGCTG 60.664 66.667 0.00 0.00 0.00 5.18
8509 8964 2.507944 GCTCATCCCCATCGCTGT 59.492 61.111 0.00 0.00 0.00 4.40
8510 8965 1.153086 GCTCATCCCCATCGCTGTT 60.153 57.895 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 156 0.545646 AGGAGGAGGAAATGCTCTGC 59.454 55.000 1.90 0.00 45.30 4.26
303 311 4.826733 TCGAACCCCCAATCAATCAATATG 59.173 41.667 0.00 0.00 0.00 1.78
366 374 2.504367 CTCTGTGGGATTTGGAAACGT 58.496 47.619 0.00 0.00 0.00 3.99
431 445 5.343307 AAATTGTCCTATGTTTCATGGCC 57.657 39.130 0.00 0.00 0.00 5.36
540 554 5.066375 GCTTTGTTCCCTTTGCAAGAAAAAT 59.934 36.000 0.00 0.00 0.00 1.82
574 600 2.981875 ACAACGACATTCGCTTTCAAC 58.018 42.857 0.00 0.00 45.12 3.18
619 645 2.527951 AAAGGGCTAGCCAGTCTGCG 62.528 60.000 34.09 0.00 37.98 5.18
621 647 0.107459 GGAAAGGGCTAGCCAGTCTG 60.107 60.000 34.09 0.00 37.98 3.51
625 651 0.548031 TGATGGAAAGGGCTAGCCAG 59.452 55.000 34.09 0.00 37.98 4.85
722 751 0.039618 TTCCATTCAACCCTGAGGCC 59.960 55.000 0.00 0.00 36.11 5.19
733 762 1.971167 GGGCTGCACGTTCCATTCA 60.971 57.895 0.50 0.00 0.00 2.57
748 777 0.378610 GCGCATAAGAGAAGTTGGGC 59.621 55.000 0.30 0.00 40.15 5.36
765 794 1.197721 GTTTTCAGACACCATGAGGCG 59.802 52.381 0.00 0.00 39.06 5.52
1098 1150 7.749126 GGAATTGAATTTTACAAACGATCGAGT 59.251 33.333 24.34 18.35 0.00 4.18
1114 1166 6.777580 AGCAGAATATAACGGGGAATTGAATT 59.222 34.615 0.00 0.00 0.00 2.17
1115 1167 6.306987 AGCAGAATATAACGGGGAATTGAAT 58.693 36.000 0.00 0.00 0.00 2.57
1116 1168 5.690865 AGCAGAATATAACGGGGAATTGAA 58.309 37.500 0.00 0.00 0.00 2.69
1117 1169 5.304686 AGCAGAATATAACGGGGAATTGA 57.695 39.130 0.00 0.00 0.00 2.57
1118 1170 4.152402 CGAGCAGAATATAACGGGGAATTG 59.848 45.833 0.00 0.00 0.00 2.32
1394 1450 1.068434 CCTAGCAGTAGAAGCAGCTCC 59.932 57.143 0.00 0.00 38.47 4.70
1500 1556 1.929836 GCAGAATAGCTCAACTGACCG 59.070 52.381 15.03 0.00 32.90 4.79
1629 1710 7.278646 TGAGACAAAACACTAGCATAGCATTAG 59.721 37.037 0.00 0.00 44.39 1.73
1763 1844 4.390603 TGTATGTACAAATCACTGCCGAAC 59.609 41.667 0.00 0.00 32.40 3.95
2195 2354 6.605194 TGGCACTAGGCATATTTTTAATGACA 59.395 34.615 0.00 0.00 46.46 3.58
2310 2470 9.979578 ACAATTAATTCTGCAATGTCAAAACTA 57.020 25.926 0.00 0.00 0.00 2.24
2330 2490 3.004629 CAGGCAGCAACAGACAACAATTA 59.995 43.478 0.00 0.00 0.00 1.40
2392 2552 9.579932 AATACACAAATCTTCTCCTTCTTCTTT 57.420 29.630 0.00 0.00 0.00 2.52
2394 2554 9.660180 GTAATACACAAATCTTCTCCTTCTTCT 57.340 33.333 0.00 0.00 0.00 2.85
2396 2556 9.965902 ATGTAATACACAAATCTTCTCCTTCTT 57.034 29.630 0.00 0.00 41.55 2.52
2398 2558 9.606631 AGATGTAATACACAAATCTTCTCCTTC 57.393 33.333 0.00 0.00 41.55 3.46
2399 2559 9.388506 CAGATGTAATACACAAATCTTCTCCTT 57.611 33.333 0.00 0.00 41.55 3.36
2400 2560 7.989741 CCAGATGTAATACACAAATCTTCTCCT 59.010 37.037 0.00 0.00 41.55 3.69
2401 2561 7.987458 TCCAGATGTAATACACAAATCTTCTCC 59.013 37.037 0.00 0.00 41.55 3.71
2402 2562 8.948631 TCCAGATGTAATACACAAATCTTCTC 57.051 34.615 0.00 0.00 41.55 2.87
2403 2563 9.911788 ATTCCAGATGTAATACACAAATCTTCT 57.088 29.630 0.00 0.00 41.55 2.85
2405 2565 9.685276 TGATTCCAGATGTAATACACAAATCTT 57.315 29.630 0.00 0.00 41.55 2.40
2406 2566 9.685276 TTGATTCCAGATGTAATACACAAATCT 57.315 29.630 0.00 0.00 41.55 2.40
2407 2567 9.941664 CTTGATTCCAGATGTAATACACAAATC 57.058 33.333 0.00 2.49 41.55 2.17
2430 2590 4.894784 TGTAGCTAACACCCTTCTTCTTG 58.105 43.478 0.00 0.00 31.43 3.02
2431 2591 5.562298 TTGTAGCTAACACCCTTCTTCTT 57.438 39.130 0.00 0.00 38.00 2.52
2432 2592 5.248477 TGATTGTAGCTAACACCCTTCTTCT 59.752 40.000 0.00 0.00 38.00 2.85
2435 2595 5.700402 ATGATTGTAGCTAACACCCTTCT 57.300 39.130 0.00 0.00 38.00 2.85
2436 2596 6.555315 CAAATGATTGTAGCTAACACCCTTC 58.445 40.000 0.00 0.00 38.00 3.46
2437 2597 6.515272 CAAATGATTGTAGCTAACACCCTT 57.485 37.500 0.00 0.00 38.00 3.95
2464 2624 9.844257 CTCCTTCTTCTTTATTCCAGATGTAAT 57.156 33.333 0.00 0.00 0.00 1.89
2465 2625 9.046846 TCTCCTTCTTCTTTATTCCAGATGTAA 57.953 33.333 0.00 0.00 0.00 2.41
2466 2626 8.609617 TCTCCTTCTTCTTTATTCCAGATGTA 57.390 34.615 0.00 0.00 0.00 2.29
2467 2627 7.502060 TCTCCTTCTTCTTTATTCCAGATGT 57.498 36.000 0.00 0.00 0.00 3.06
2468 2628 8.263640 TCTTCTCCTTCTTCTTTATTCCAGATG 58.736 37.037 0.00 0.00 0.00 2.90
2469 2629 8.386012 TCTTCTCCTTCTTCTTTATTCCAGAT 57.614 34.615 0.00 0.00 0.00 2.90
2470 2630 7.798710 TCTTCTCCTTCTTCTTTATTCCAGA 57.201 36.000 0.00 0.00 0.00 3.86
2471 2631 9.460019 AAATCTTCTCCTTCTTCTTTATTCCAG 57.540 33.333 0.00 0.00 0.00 3.86
2472 2632 9.454859 GAAATCTTCTCCTTCTTCTTTATTCCA 57.545 33.333 0.00 0.00 0.00 3.53
2473 2633 9.679661 AGAAATCTTCTCCTTCTTCTTTATTCC 57.320 33.333 0.00 0.00 34.07 3.01
2478 2638 9.585369 AATCAAGAAATCTTCTCCTTCTTCTTT 57.415 29.630 0.00 0.00 39.61 2.52
2479 2639 9.230122 GAATCAAGAAATCTTCTCCTTCTTCTT 57.770 33.333 0.00 0.00 39.61 2.52
2480 2640 7.828717 GGAATCAAGAAATCTTCTCCTTCTTCT 59.171 37.037 0.00 0.00 39.61 2.85
2481 2641 7.828717 AGGAATCAAGAAATCTTCTCCTTCTTC 59.171 37.037 10.25 0.00 39.61 2.87
2504 2664 9.733556 TGTTAGCTACAATCATTTTAAAGAGGA 57.266 29.630 0.00 0.00 32.64 3.71
2505 2665 9.774742 GTGTTAGCTACAATCATTTTAAAGAGG 57.225 33.333 0.00 0.00 38.80 3.69
2506 2666 9.774742 GGTGTTAGCTACAATCATTTTAAAGAG 57.225 33.333 0.00 0.00 38.80 2.85
2508 2668 8.739972 AGGGTGTTAGCTACAATCATTTTAAAG 58.260 33.333 0.00 0.00 38.80 1.85
2509 2669 8.644374 AGGGTGTTAGCTACAATCATTTTAAA 57.356 30.769 0.00 0.00 38.80 1.52
2514 2682 5.700402 AGAGGGTGTTAGCTACAATCATT 57.300 39.130 0.00 0.00 38.80 2.57
2671 2842 2.513753 CAACCACCAGCTTATGTTGGA 58.486 47.619 16.91 0.00 45.89 3.53
2699 2870 1.974265 TGGACACGAATCCAAAAGCA 58.026 45.000 9.53 0.00 46.08 3.91
2705 2877 0.834261 TCCCACTGGACACGAATCCA 60.834 55.000 11.15 11.15 46.92 3.41
2720 2892 0.037590 ACTTTGGCACGCTTATCCCA 59.962 50.000 0.00 0.00 0.00 4.37
2961 3134 9.288576 TGAAGCAATCTTTCTTCTCTTTAATCA 57.711 29.630 4.42 0.00 39.41 2.57
2999 3172 2.840038 TGTTGTCTGCACTCCTATCCAT 59.160 45.455 0.00 0.00 0.00 3.41
3054 3227 2.386660 GCTTCACTGACAGCTCGCC 61.387 63.158 1.25 0.00 32.87 5.54
3087 3260 0.683412 AACCGTTGTAGAGGTCCCAC 59.317 55.000 0.00 0.00 40.37 4.61
3090 3263 1.134877 GCCTAACCGTTGTAGAGGTCC 60.135 57.143 0.00 0.00 40.37 4.46
3092 3265 1.274447 GTGCCTAACCGTTGTAGAGGT 59.726 52.381 0.00 0.00 43.68 3.85
3093 3266 1.734707 CGTGCCTAACCGTTGTAGAGG 60.735 57.143 0.00 0.00 33.00 3.69
3095 3268 1.246649 TCGTGCCTAACCGTTGTAGA 58.753 50.000 0.00 0.00 0.00 2.59
3096 3269 1.990563 CTTCGTGCCTAACCGTTGTAG 59.009 52.381 0.00 0.00 0.00 2.74
3097 3270 1.337074 CCTTCGTGCCTAACCGTTGTA 60.337 52.381 0.00 0.00 0.00 2.41
3098 3271 0.601841 CCTTCGTGCCTAACCGTTGT 60.602 55.000 0.00 0.00 0.00 3.32
3163 3338 0.472471 TTGGCCAATATCCCTCGTCC 59.528 55.000 16.05 0.00 0.00 4.79
3378 3554 4.439289 CGCCTTGATTCCTTTCATCCTTTC 60.439 45.833 0.00 0.00 0.00 2.62
3405 3583 3.465210 TCAATGGGGATACAATTAGGGCA 59.535 43.478 0.00 0.00 39.74 5.36
3411 3589 5.375354 TCCATACCTCAATGGGGATACAATT 59.625 40.000 5.97 0.00 45.57 2.32
3431 3609 1.299976 GTCCACGAGGCCTTTCCAT 59.700 57.895 6.77 0.00 37.29 3.41
3445 3623 3.431415 AGCCATACTATCGCTATGTCCA 58.569 45.455 0.00 0.00 0.00 4.02
3628 3808 4.326826 TCTTCTTAAGTGGTGCTCAATGG 58.673 43.478 1.63 0.00 0.00 3.16
3640 3820 5.177696 GTCACGCTTGTCATTCTTCTTAAGT 59.822 40.000 1.63 0.00 0.00 2.24
3695 3875 2.442236 AAATGGCTTCCATGGTCGAT 57.558 45.000 12.58 2.61 44.40 3.59
4219 4442 2.357952 GACCCCAAATATCGAAAGGTGC 59.642 50.000 0.00 0.00 0.00 5.01
4346 4569 3.450817 ACTTGCCTTTTAGCTTTTGTGGT 59.549 39.130 0.00 0.00 0.00 4.16
4505 4731 7.640597 ATCTCGTATATCATAATTCCGGACA 57.359 36.000 1.83 0.00 0.00 4.02
4515 4741 7.640313 ACCCCAACTCTATCTCGTATATCATA 58.360 38.462 0.00 0.00 0.00 2.15
4688 4914 2.750712 GTCGCTCTTAACAGACTCCTCT 59.249 50.000 0.00 0.00 0.00 3.69
4706 4932 3.384789 TGATACTCCAATCCTTCAGGTCG 59.615 47.826 0.00 0.00 36.34 4.79
4748 4974 2.221299 AAGCTTCCACGCACCCCTA 61.221 57.895 0.00 0.00 0.00 3.53
5245 5472 6.255887 AGCAGATCAAATAGTAACTAACACGC 59.744 38.462 0.00 0.00 0.00 5.34
5246 5473 7.275779 ACAGCAGATCAAATAGTAACTAACACG 59.724 37.037 0.00 0.00 0.00 4.49
5269 5496 3.440522 TGCTAGTGTGCTACAGTCTACAG 59.559 47.826 0.00 0.00 33.15 2.74
5309 5536 3.159353 TGTTGCTAGCGTACTATGGTG 57.841 47.619 10.77 0.00 0.00 4.17
5339 5566 1.202359 TGTCACGCAAGCGCATATCTA 60.202 47.619 15.09 0.00 44.19 1.98
5494 5721 4.459337 AGCATAAAAGGTCTACAACTTGGC 59.541 41.667 0.00 0.00 0.00 4.52
5567 5794 4.918360 ACCACAGACAGGGCCCCA 62.918 66.667 21.43 0.00 0.00 4.96
5636 5863 3.016736 ACTAAATGTTTGGCTCCATCCG 58.983 45.455 0.00 0.00 0.00 4.18
5706 5939 9.646427 GCAATAACAAAAGGAACATGGTAAATA 57.354 29.630 0.00 0.00 0.00 1.40
5707 5940 8.374743 AGCAATAACAAAAGGAACATGGTAAAT 58.625 29.630 0.00 0.00 0.00 1.40
5708 5941 7.731054 AGCAATAACAAAAGGAACATGGTAAA 58.269 30.769 0.00 0.00 0.00 2.01
5840 6164 1.742761 AACCCTGCACATGAATCTCG 58.257 50.000 0.00 0.00 0.00 4.04
5914 6238 5.261209 TGCAGCAATAACAATATGTTCCC 57.739 39.130 0.00 0.00 40.22 3.97
5916 6240 8.188531 ACAAATGCAGCAATAACAATATGTTC 57.811 30.769 0.00 0.00 40.22 3.18
6038 6460 6.345298 TCGATTCTTAATGCAAGGTCATACA 58.655 36.000 0.00 0.00 34.76 2.29
6087 6510 1.125711 ACCCCACCTGCGTTAAGAGT 61.126 55.000 0.00 0.00 0.00 3.24
6092 6515 3.642503 CCCACCCCACCTGCGTTA 61.643 66.667 0.00 0.00 0.00 3.18
6115 6538 1.480954 CGGTTGGCTAGTGGTATGAGT 59.519 52.381 0.00 0.00 0.00 3.41
6236 6660 7.922811 GGCTGGAATAGTCCTAAAAATCAATTG 59.077 37.037 11.10 0.00 45.22 2.32
6281 6706 5.526479 CCATGGACAAGATCATTCTGTACAG 59.474 44.000 17.17 17.17 31.62 2.74
6572 7002 8.008332 AGGGAAACTTTAATTAAACTCCCTTGA 58.992 33.333 27.09 3.61 40.79 3.02
6678 7108 3.942829 TGTCATTGCAGAACCTCCTAAG 58.057 45.455 0.00 0.00 0.00 2.18
6844 7275 6.608808 AGATATAAGCTTTGGCATTGTCCTTT 59.391 34.615 3.20 0.00 41.70 3.11
7116 7547 2.553904 CCTTTGTCCTCATGTCAAGGCT 60.554 50.000 0.00 0.00 33.65 4.58
7216 7647 7.284489 TGTTCAGACTTATTGCTGTTTTAGGTT 59.716 33.333 0.00 0.00 33.90 3.50
7238 7669 4.583073 AGTTTACAAGTGGGGTGATTGTTC 59.417 41.667 0.00 0.00 38.14 3.18
7289 7738 7.921786 TGATATGGTTAACTGCCTATAATGC 57.078 36.000 5.42 0.00 0.00 3.56
7454 7907 3.201290 GTGAGCGAGTGAATGGATCAAT 58.799 45.455 0.00 0.00 40.50 2.57
7491 7944 3.099905 TGCTAATCTACTGCTGGTCTGT 58.900 45.455 0.00 0.00 0.00 3.41
7580 8035 3.554934 AGATTTTGCACAGAACTGGACA 58.445 40.909 6.76 1.48 34.19 4.02
7655 8110 2.749076 CACTTTCCATTCGAATCTGCCA 59.251 45.455 7.92 0.00 0.00 4.92
7686 8141 1.873591 GAAAAAGGCGCAACAGAGAGA 59.126 47.619 10.83 0.00 0.00 3.10
7687 8142 1.876156 AGAAAAAGGCGCAACAGAGAG 59.124 47.619 10.83 0.00 0.00 3.20
7718 8173 0.041312 CAGAGTGGCCGAAACAAACG 60.041 55.000 0.00 0.00 0.00 3.60
7753 8208 2.674852 CTCCATTGTGGTTCATGAGTCG 59.325 50.000 0.00 0.00 39.03 4.18
7802 8257 0.478072 CACCCTGGGGCTATGCATTA 59.522 55.000 18.88 0.00 39.32 1.90
7814 8269 0.250038 CATACGGAGCATCACCCTGG 60.250 60.000 0.00 0.00 36.25 4.45
7823 8278 2.871453 TCCTACATAGCATACGGAGCA 58.129 47.619 0.00 0.00 0.00 4.26
7826 8281 3.014623 CCGATCCTACATAGCATACGGA 58.985 50.000 0.00 0.00 40.16 4.69
7827 8282 3.014623 TCCGATCCTACATAGCATACGG 58.985 50.000 0.00 0.00 39.30 4.02
7829 8284 7.308891 CCTGATATCCGATCCTACATAGCATAC 60.309 44.444 0.00 0.00 0.00 2.39
7830 8285 6.717084 CCTGATATCCGATCCTACATAGCATA 59.283 42.308 0.00 0.00 0.00 3.14
7835 8290 8.114102 ACTTTACCTGATATCCGATCCTACATA 58.886 37.037 0.00 0.00 0.00 2.29
7863 8318 2.920524 TCTCGCTTCTCTATCCGAACT 58.079 47.619 0.00 0.00 0.00 3.01
7874 8329 1.552337 TCTGCAAAGGATCTCGCTTCT 59.448 47.619 0.00 0.00 0.00 2.85
7881 8336 1.005215 CCCACCTTCTGCAAAGGATCT 59.995 52.381 25.14 8.35 39.81 2.75
7886 8341 0.825010 AGCACCCACCTTCTGCAAAG 60.825 55.000 0.00 0.00 33.06 2.77
7888 8343 1.108727 CAAGCACCCACCTTCTGCAA 61.109 55.000 0.00 0.00 33.06 4.08
7894 8349 1.140312 TCTCTTCAAGCACCCACCTT 58.860 50.000 0.00 0.00 0.00 3.50
7898 8353 2.951642 CACTTTTCTCTTCAAGCACCCA 59.048 45.455 0.00 0.00 0.00 4.51
7908 8363 1.489230 ACCGGACCACACTTTTCTCTT 59.511 47.619 9.46 0.00 0.00 2.85
7945 8400 3.126000 GCATCTCTACTTTGCACTCCAAC 59.874 47.826 0.00 0.00 36.40 3.77
7958 8413 7.881142 AGACTCTAATACACATGCATCTCTAC 58.119 38.462 0.00 0.00 0.00 2.59
7979 8434 9.384764 GCTTCACAGGAGTATAAAATAAAGACT 57.615 33.333 0.00 0.00 0.00 3.24
7983 8438 7.556275 CAGGGCTTCACAGGAGTATAAAATAAA 59.444 37.037 0.00 0.00 0.00 1.40
7984 8439 7.054124 CAGGGCTTCACAGGAGTATAAAATAA 58.946 38.462 0.00 0.00 0.00 1.40
7985 8440 6.157994 ACAGGGCTTCACAGGAGTATAAAATA 59.842 38.462 0.00 0.00 0.00 1.40
7986 8441 5.044846 ACAGGGCTTCACAGGAGTATAAAAT 60.045 40.000 0.00 0.00 0.00 1.82
7987 8442 4.288626 ACAGGGCTTCACAGGAGTATAAAA 59.711 41.667 0.00 0.00 0.00 1.52
7988 8443 3.844211 ACAGGGCTTCACAGGAGTATAAA 59.156 43.478 0.00 0.00 0.00 1.40
7989 8444 3.197766 CACAGGGCTTCACAGGAGTATAA 59.802 47.826 0.00 0.00 0.00 0.98
7990 8445 2.766263 CACAGGGCTTCACAGGAGTATA 59.234 50.000 0.00 0.00 0.00 1.47
7991 8446 1.556911 CACAGGGCTTCACAGGAGTAT 59.443 52.381 0.00 0.00 0.00 2.12
7992 8447 0.976641 CACAGGGCTTCACAGGAGTA 59.023 55.000 0.00 0.00 0.00 2.59
7993 8448 1.056700 ACACAGGGCTTCACAGGAGT 61.057 55.000 0.00 0.00 0.00 3.85
7994 8449 0.976641 TACACAGGGCTTCACAGGAG 59.023 55.000 0.00 0.00 0.00 3.69
7995 8450 1.656587 ATACACAGGGCTTCACAGGA 58.343 50.000 0.00 0.00 0.00 3.86
7996 8451 2.496899 AATACACAGGGCTTCACAGG 57.503 50.000 0.00 0.00 0.00 4.00
7997 8452 4.081420 ACTCTAATACACAGGGCTTCACAG 60.081 45.833 0.00 0.00 0.00 3.66
7998 8453 3.838317 ACTCTAATACACAGGGCTTCACA 59.162 43.478 0.00 0.00 0.00 3.58
7999 8454 4.473477 ACTCTAATACACAGGGCTTCAC 57.527 45.455 0.00 0.00 0.00 3.18
8000 8455 5.499004 AAACTCTAATACACAGGGCTTCA 57.501 39.130 0.00 0.00 0.00 3.02
8001 8456 6.819397 AAAAACTCTAATACACAGGGCTTC 57.181 37.500 0.00 0.00 0.00 3.86
8002 8457 8.879427 AATAAAAACTCTAATACACAGGGCTT 57.121 30.769 0.00 0.00 0.00 4.35
8003 8458 8.879427 AAATAAAAACTCTAATACACAGGGCT 57.121 30.769 0.00 0.00 0.00 5.19
8133 8588 5.534654 TCCCATGACAAAAAGTAGTTTGAGG 59.465 40.000 4.76 1.92 40.29 3.86
8157 8612 7.715249 ACATAAAGTACAACTCAACACAGATGT 59.285 33.333 0.00 0.00 42.46 3.06
8163 8618 6.491394 TGCAACATAAAGTACAACTCAACAC 58.509 36.000 0.00 0.00 0.00 3.32
8164 8619 6.685527 TGCAACATAAAGTACAACTCAACA 57.314 33.333 0.00 0.00 0.00 3.33
8165 8620 7.138736 ACATGCAACATAAAGTACAACTCAAC 58.861 34.615 0.00 0.00 0.00 3.18
8166 8621 7.270757 ACATGCAACATAAAGTACAACTCAA 57.729 32.000 0.00 0.00 0.00 3.02
8167 8622 6.875948 ACATGCAACATAAAGTACAACTCA 57.124 33.333 0.00 0.00 0.00 3.41
8170 8625 9.205916 CGTAATACATGCAACATAAAGTACAAC 57.794 33.333 0.00 0.00 0.00 3.32
8171 8626 8.937884 ACGTAATACATGCAACATAAAGTACAA 58.062 29.630 0.00 0.00 0.00 2.41
8172 8627 8.384365 CACGTAATACATGCAACATAAAGTACA 58.616 33.333 0.00 0.00 0.00 2.90
8173 8628 8.385111 ACACGTAATACATGCAACATAAAGTAC 58.615 33.333 0.00 0.00 0.00 2.73
8174 8629 8.481974 ACACGTAATACATGCAACATAAAGTA 57.518 30.769 0.00 0.00 0.00 2.24
8175 8630 7.372451 ACACGTAATACATGCAACATAAAGT 57.628 32.000 0.00 0.00 0.00 2.66
8176 8631 8.175069 AGAACACGTAATACATGCAACATAAAG 58.825 33.333 0.00 0.00 0.00 1.85
8177 8632 7.960195 CAGAACACGTAATACATGCAACATAAA 59.040 33.333 0.00 0.00 0.00 1.40
8178 8633 7.413548 CCAGAACACGTAATACATGCAACATAA 60.414 37.037 0.00 0.00 0.00 1.90
8179 8634 6.036626 CCAGAACACGTAATACATGCAACATA 59.963 38.462 0.00 0.00 0.00 2.29
8180 8635 5.163764 CCAGAACACGTAATACATGCAACAT 60.164 40.000 0.00 0.00 0.00 2.71
8181 8636 4.153296 CCAGAACACGTAATACATGCAACA 59.847 41.667 0.00 0.00 0.00 3.33
8182 8637 4.647964 CCAGAACACGTAATACATGCAAC 58.352 43.478 0.00 0.00 0.00 4.17
8183 8638 3.126171 GCCAGAACACGTAATACATGCAA 59.874 43.478 0.00 0.00 0.00 4.08
8184 8639 2.675844 GCCAGAACACGTAATACATGCA 59.324 45.455 0.00 0.00 0.00 3.96
8185 8640 2.031683 GGCCAGAACACGTAATACATGC 59.968 50.000 0.00 0.00 0.00 4.06
8186 8641 2.612212 GGGCCAGAACACGTAATACATG 59.388 50.000 4.39 0.00 0.00 3.21
8187 8642 2.237643 TGGGCCAGAACACGTAATACAT 59.762 45.455 0.00 0.00 0.00 2.29
8188 8643 1.624312 TGGGCCAGAACACGTAATACA 59.376 47.619 0.00 0.00 0.00 2.29
8189 8644 2.004733 GTGGGCCAGAACACGTAATAC 58.995 52.381 6.40 0.00 0.00 1.89
8190 8645 1.065998 GGTGGGCCAGAACACGTAATA 60.066 52.381 6.40 0.00 38.46 0.98
8191 8646 0.322187 GGTGGGCCAGAACACGTAAT 60.322 55.000 6.40 0.00 38.46 1.89
8192 8647 1.071814 GGTGGGCCAGAACACGTAA 59.928 57.895 6.40 0.00 38.46 3.18
8193 8648 1.823169 GAGGTGGGCCAGAACACGTA 61.823 60.000 6.40 0.00 38.46 3.57
8194 8649 3.168528 AGGTGGGCCAGAACACGT 61.169 61.111 6.40 1.64 38.46 4.49
8195 8650 2.358737 GAGGTGGGCCAGAACACG 60.359 66.667 6.40 0.00 38.46 4.49
8196 8651 1.198759 TAGGAGGTGGGCCAGAACAC 61.199 60.000 6.40 2.66 37.19 3.32
8197 8652 0.909610 CTAGGAGGTGGGCCAGAACA 60.910 60.000 6.40 0.00 37.19 3.18
8198 8653 0.910088 ACTAGGAGGTGGGCCAGAAC 60.910 60.000 6.40 0.00 37.19 3.01
8199 8654 0.178873 AACTAGGAGGTGGGCCAGAA 60.179 55.000 6.40 0.00 37.19 3.02
8200 8655 0.909610 CAACTAGGAGGTGGGCCAGA 60.910 60.000 6.40 0.00 37.19 3.86
8201 8656 1.201429 ACAACTAGGAGGTGGGCCAG 61.201 60.000 6.40 0.00 37.20 4.85
8202 8657 0.117541 TACAACTAGGAGGTGGGCCA 59.882 55.000 0.00 0.00 37.20 5.36
8203 8658 1.508256 ATACAACTAGGAGGTGGGCC 58.492 55.000 0.00 0.00 37.20 5.80
8204 8659 5.085219 ACTATATACAACTAGGAGGTGGGC 58.915 45.833 0.00 0.00 37.20 5.36
8205 8660 6.781014 TCAACTATATACAACTAGGAGGTGGG 59.219 42.308 0.00 0.00 37.20 4.61
8206 8661 7.039644 CCTCAACTATATACAACTAGGAGGTGG 60.040 44.444 0.00 0.00 37.20 4.61
8207 8662 7.506261 ACCTCAACTATATACAACTAGGAGGTG 59.494 40.741 0.00 0.00 46.91 4.00
8208 8663 7.593653 ACCTCAACTATATACAACTAGGAGGT 58.406 38.462 0.00 0.00 44.72 3.85
8209 8664 8.361139 CAACCTCAACTATATACAACTAGGAGG 58.639 40.741 0.00 0.00 42.90 4.30
8210 8665 9.132923 TCAACCTCAACTATATACAACTAGGAG 57.867 37.037 0.00 0.00 0.00 3.69
8211 8666 9.132923 CTCAACCTCAACTATATACAACTAGGA 57.867 37.037 0.00 0.00 0.00 2.94
8212 8667 8.361139 CCTCAACCTCAACTATATACAACTAGG 58.639 40.741 0.00 0.00 0.00 3.02
8213 8668 7.868415 GCCTCAACCTCAACTATATACAACTAG 59.132 40.741 0.00 0.00 0.00 2.57
8214 8669 7.201974 GGCCTCAACCTCAACTATATACAACTA 60.202 40.741 0.00 0.00 0.00 2.24
8215 8670 6.408206 GGCCTCAACCTCAACTATATACAACT 60.408 42.308 0.00 0.00 0.00 3.16
8216 8671 5.758784 GGCCTCAACCTCAACTATATACAAC 59.241 44.000 0.00 0.00 0.00 3.32
8217 8672 5.665812 AGGCCTCAACCTCAACTATATACAA 59.334 40.000 0.00 0.00 33.62 2.41
8218 8673 5.216622 AGGCCTCAACCTCAACTATATACA 58.783 41.667 0.00 0.00 33.62 2.29
8219 8674 5.810080 AGGCCTCAACCTCAACTATATAC 57.190 43.478 0.00 0.00 33.62 1.47
8220 8675 5.778750 GGTAGGCCTCAACCTCAACTATATA 59.221 44.000 9.68 0.00 41.50 0.86
8221 8676 4.593634 GGTAGGCCTCAACCTCAACTATAT 59.406 45.833 9.68 0.00 41.50 0.86
8222 8677 3.965347 GGTAGGCCTCAACCTCAACTATA 59.035 47.826 9.68 0.00 41.50 1.31
8223 8678 2.772515 GGTAGGCCTCAACCTCAACTAT 59.227 50.000 9.68 0.00 41.50 2.12
8224 8679 2.185387 GGTAGGCCTCAACCTCAACTA 58.815 52.381 9.68 0.00 41.50 2.24
8225 8680 0.984995 GGTAGGCCTCAACCTCAACT 59.015 55.000 9.68 0.00 41.50 3.16
8226 8681 0.035343 GGGTAGGCCTCAACCTCAAC 60.035 60.000 21.67 7.05 41.50 3.18
8227 8682 0.178873 AGGGTAGGCCTCAACCTCAA 60.179 55.000 21.67 0.00 41.50 3.02
8228 8683 0.714180 TAGGGTAGGCCTCAACCTCA 59.286 55.000 21.67 9.13 41.50 3.86
8229 8684 2.104669 ATAGGGTAGGCCTCAACCTC 57.895 55.000 21.67 13.10 41.50 3.85
8230 8685 2.523138 AGTATAGGGTAGGCCTCAACCT 59.477 50.000 21.67 21.90 44.31 3.50
8231 8686 2.973710 AGTATAGGGTAGGCCTCAACC 58.026 52.381 9.68 13.37 34.85 3.77
8232 8687 6.723052 TGTATAAGTATAGGGTAGGCCTCAAC 59.277 42.308 9.68 1.64 34.45 3.18
8233 8688 6.866621 TGTATAAGTATAGGGTAGGCCTCAA 58.133 40.000 9.68 0.00 34.45 3.02
8234 8689 6.473429 TGTATAAGTATAGGGTAGGCCTCA 57.527 41.667 9.68 0.00 34.45 3.86
8235 8690 8.057623 TGTATGTATAAGTATAGGGTAGGCCTC 58.942 40.741 9.68 0.00 34.45 4.70
8236 8691 7.947484 TGTATGTATAAGTATAGGGTAGGCCT 58.053 38.462 11.78 11.78 34.45 5.19
8237 8692 8.639761 CATGTATGTATAAGTATAGGGTAGGCC 58.360 40.741 0.00 0.00 0.00 5.19
8238 8693 8.142551 GCATGTATGTATAAGTATAGGGTAGGC 58.857 40.741 0.00 0.00 0.00 3.93
8239 8694 8.350722 CGCATGTATGTATAAGTATAGGGTAGG 58.649 40.741 0.00 0.00 0.00 3.18
8240 8695 7.861372 GCGCATGTATGTATAAGTATAGGGTAG 59.139 40.741 0.30 0.00 0.00 3.18
8241 8696 7.201848 GGCGCATGTATGTATAAGTATAGGGTA 60.202 40.741 10.83 0.00 0.00 3.69
8242 8697 6.406624 GGCGCATGTATGTATAAGTATAGGGT 60.407 42.308 10.83 0.00 0.00 4.34
8243 8698 5.983720 GGCGCATGTATGTATAAGTATAGGG 59.016 44.000 10.83 0.00 0.00 3.53
8244 8699 6.569780 TGGCGCATGTATGTATAAGTATAGG 58.430 40.000 10.83 0.00 0.00 2.57
8245 8700 6.199154 GCTGGCGCATGTATGTATAAGTATAG 59.801 42.308 10.83 0.00 35.78 1.31
8246 8701 6.040247 GCTGGCGCATGTATGTATAAGTATA 58.960 40.000 10.83 0.00 35.78 1.47
8247 8702 4.870426 GCTGGCGCATGTATGTATAAGTAT 59.130 41.667 10.83 0.00 35.78 2.12
8248 8703 4.242475 GCTGGCGCATGTATGTATAAGTA 58.758 43.478 10.83 0.00 35.78 2.24
8249 8704 3.067106 GCTGGCGCATGTATGTATAAGT 58.933 45.455 10.83 0.00 35.78 2.24
8250 8705 3.066380 TGCTGGCGCATGTATGTATAAG 58.934 45.455 10.83 0.00 42.25 1.73
8251 8706 3.118905 TGCTGGCGCATGTATGTATAA 57.881 42.857 10.83 0.00 42.25 0.98
8252 8707 2.829741 TGCTGGCGCATGTATGTATA 57.170 45.000 10.83 0.00 42.25 1.47
8253 8708 3.704100 TGCTGGCGCATGTATGTAT 57.296 47.368 10.83 0.00 42.25 2.29
8264 8719 3.136123 CTTGATGGGGTGCTGGCG 61.136 66.667 0.00 0.00 0.00 5.69
8265 8720 2.048603 GTCTTGATGGGGTGCTGGC 61.049 63.158 0.00 0.00 0.00 4.85
8266 8721 0.251297 TTGTCTTGATGGGGTGCTGG 60.251 55.000 0.00 0.00 0.00 4.85
8267 8722 0.883833 GTTGTCTTGATGGGGTGCTG 59.116 55.000 0.00 0.00 0.00 4.41
8268 8723 0.606401 CGTTGTCTTGATGGGGTGCT 60.606 55.000 0.00 0.00 0.00 4.40
8269 8724 0.605319 TCGTTGTCTTGATGGGGTGC 60.605 55.000 0.00 0.00 0.00 5.01
8270 8725 2.113860 ATCGTTGTCTTGATGGGGTG 57.886 50.000 0.00 0.00 0.00 4.61
8271 8726 2.879103 AATCGTTGTCTTGATGGGGT 57.121 45.000 0.00 0.00 0.00 4.95
8272 8727 4.640201 ACAATAATCGTTGTCTTGATGGGG 59.360 41.667 0.00 0.00 37.80 4.96
8273 8728 5.818136 ACAATAATCGTTGTCTTGATGGG 57.182 39.130 0.00 0.00 37.80 4.00
8274 8729 7.376866 GCAATACAATAATCGTTGTCTTGATGG 59.623 37.037 16.82 0.00 43.31 3.51
8275 8730 7.909641 TGCAATACAATAATCGTTGTCTTGATG 59.090 33.333 16.82 4.84 43.31 3.07
8276 8731 7.984391 TGCAATACAATAATCGTTGTCTTGAT 58.016 30.769 16.82 0.00 43.31 2.57
8277 8732 7.371126 TGCAATACAATAATCGTTGTCTTGA 57.629 32.000 16.82 4.94 43.31 3.02
8278 8733 8.446489 TTTGCAATACAATAATCGTTGTCTTG 57.554 30.769 0.00 11.28 43.41 3.02
8279 8734 8.911662 GTTTTGCAATACAATAATCGTTGTCTT 58.088 29.630 14.24 0.00 41.18 3.01
8280 8735 8.079203 TGTTTTGCAATACAATAATCGTTGTCT 58.921 29.630 18.69 0.00 41.18 3.41
8281 8736 8.221801 TGTTTTGCAATACAATAATCGTTGTC 57.778 30.769 18.69 0.00 41.18 3.18
8282 8737 8.755696 ATGTTTTGCAATACAATAATCGTTGT 57.244 26.923 23.53 3.68 44.09 3.32
8283 8738 9.075519 AGATGTTTTGCAATACAATAATCGTTG 57.924 29.630 23.53 0.00 38.31 4.10
8284 8739 9.289303 GAGATGTTTTGCAATACAATAATCGTT 57.711 29.630 23.53 7.38 38.31 3.85
8285 8740 8.677300 AGAGATGTTTTGCAATACAATAATCGT 58.323 29.630 23.53 8.05 38.31 3.73
8286 8741 9.162793 GAGAGATGTTTTGCAATACAATAATCG 57.837 33.333 23.53 0.00 38.31 3.34
8290 8745 9.665719 TGTAGAGAGATGTTTTGCAATACAATA 57.334 29.630 23.53 4.19 38.31 1.90
8291 8746 8.565896 TGTAGAGAGATGTTTTGCAATACAAT 57.434 30.769 23.53 16.20 38.31 2.71
8292 8747 7.977789 TGTAGAGAGATGTTTTGCAATACAA 57.022 32.000 23.53 9.91 36.13 2.41
8293 8748 7.066163 CCATGTAGAGAGATGTTTTGCAATACA 59.934 37.037 22.29 22.29 0.00 2.29
8294 8749 7.066284 ACCATGTAGAGAGATGTTTTGCAATAC 59.934 37.037 12.51 12.51 0.00 1.89
8295 8750 7.112122 ACCATGTAGAGAGATGTTTTGCAATA 58.888 34.615 0.00 0.00 0.00 1.90
8296 8751 5.948162 ACCATGTAGAGAGATGTTTTGCAAT 59.052 36.000 0.00 0.00 0.00 3.56
8297 8752 5.316167 ACCATGTAGAGAGATGTTTTGCAA 58.684 37.500 0.00 0.00 0.00 4.08
8298 8753 4.910195 ACCATGTAGAGAGATGTTTTGCA 58.090 39.130 0.00 0.00 0.00 4.08
8299 8754 7.559590 AATACCATGTAGAGAGATGTTTTGC 57.440 36.000 0.00 0.00 0.00 3.68
8302 8757 9.698309 CGATTAATACCATGTAGAGAGATGTTT 57.302 33.333 0.00 0.00 0.00 2.83
8303 8758 7.815068 GCGATTAATACCATGTAGAGAGATGTT 59.185 37.037 0.00 0.00 0.00 2.71
8304 8759 7.039714 TGCGATTAATACCATGTAGAGAGATGT 60.040 37.037 0.00 0.00 0.00 3.06
8305 8760 7.315890 TGCGATTAATACCATGTAGAGAGATG 58.684 38.462 0.00 0.00 0.00 2.90
8306 8761 7.468141 TGCGATTAATACCATGTAGAGAGAT 57.532 36.000 0.00 0.00 0.00 2.75
8307 8762 6.894339 TGCGATTAATACCATGTAGAGAGA 57.106 37.500 0.00 0.00 0.00 3.10
8308 8763 7.148641 ACTTGCGATTAATACCATGTAGAGAG 58.851 38.462 0.00 0.00 0.00 3.20
8309 8764 7.050970 ACTTGCGATTAATACCATGTAGAGA 57.949 36.000 0.00 0.00 0.00 3.10
8310 8765 6.088217 CGACTTGCGATTAATACCATGTAGAG 59.912 42.308 0.00 0.00 44.57 2.43
8311 8766 5.918576 CGACTTGCGATTAATACCATGTAGA 59.081 40.000 0.00 0.00 44.57 2.59
8312 8767 5.918576 TCGACTTGCGATTAATACCATGTAG 59.081 40.000 0.00 0.00 45.59 2.74
8313 8768 5.834169 TCGACTTGCGATTAATACCATGTA 58.166 37.500 0.00 0.00 45.59 2.29
8314 8769 4.689071 TCGACTTGCGATTAATACCATGT 58.311 39.130 0.00 0.00 45.59 3.21
8327 8782 0.460311 AGGGTTAGGATCGACTTGCG 59.540 55.000 0.00 0.00 42.69 4.85
8328 8783 2.546162 GCTAGGGTTAGGATCGACTTGC 60.546 54.545 0.00 0.00 0.00 4.01
8329 8784 2.959707 AGCTAGGGTTAGGATCGACTTG 59.040 50.000 0.00 0.00 0.00 3.16
8330 8785 3.315880 AGCTAGGGTTAGGATCGACTT 57.684 47.619 0.00 0.00 0.00 3.01
8331 8786 3.811454 GCTAGCTAGGGTTAGGATCGACT 60.811 52.174 22.10 0.00 0.00 4.18
8332 8787 2.488937 GCTAGCTAGGGTTAGGATCGAC 59.511 54.545 22.10 0.00 0.00 4.20
8333 8788 2.554785 GGCTAGCTAGGGTTAGGATCGA 60.555 54.545 22.10 0.00 0.00 3.59
8334 8789 1.819903 GGCTAGCTAGGGTTAGGATCG 59.180 57.143 22.10 0.00 0.00 3.69
8335 8790 1.819903 CGGCTAGCTAGGGTTAGGATC 59.180 57.143 22.10 2.00 0.00 3.36
8336 8791 1.926108 CGGCTAGCTAGGGTTAGGAT 58.074 55.000 22.10 0.00 0.00 3.24
8337 8792 0.826672 GCGGCTAGCTAGGGTTAGGA 60.827 60.000 22.10 0.00 44.04 2.94
8338 8793 1.666580 GCGGCTAGCTAGGGTTAGG 59.333 63.158 22.10 0.00 44.04 2.69
8384 8839 3.385749 ATAAGACCTGCGGCGGTGG 62.386 63.158 18.57 12.00 37.42 4.61
8385 8840 1.883084 GATAAGACCTGCGGCGGTG 60.883 63.158 18.57 8.21 37.42 4.94
8386 8841 2.499685 GATAAGACCTGCGGCGGT 59.500 61.111 9.78 14.66 40.80 5.68
8387 8842 2.280186 GGATAAGACCTGCGGCGG 60.280 66.667 9.78 0.65 0.00 6.13
8388 8843 1.300233 GAGGATAAGACCTGCGGCG 60.300 63.158 0.51 0.51 40.73 6.46
8389 8844 0.249657 CAGAGGATAAGACCTGCGGC 60.250 60.000 0.00 0.00 40.73 6.53
8390 8845 1.115467 ACAGAGGATAAGACCTGCGG 58.885 55.000 0.00 0.00 40.73 5.69
8391 8846 1.804372 GCACAGAGGATAAGACCTGCG 60.804 57.143 0.00 0.00 40.73 5.18
8392 8847 1.804372 CGCACAGAGGATAAGACCTGC 60.804 57.143 0.00 0.00 40.73 4.85
8393 8848 1.478510 ACGCACAGAGGATAAGACCTG 59.521 52.381 0.00 0.00 40.73 4.00
8394 8849 1.751924 GACGCACAGAGGATAAGACCT 59.248 52.381 0.00 0.00 43.64 3.85
8395 8850 1.534175 CGACGCACAGAGGATAAGACC 60.534 57.143 0.00 0.00 0.00 3.85
8396 8851 1.828832 CGACGCACAGAGGATAAGAC 58.171 55.000 0.00 0.00 0.00 3.01
8397 8852 0.100682 GCGACGCACAGAGGATAAGA 59.899 55.000 16.42 0.00 0.00 2.10
8398 8853 0.101399 AGCGACGCACAGAGGATAAG 59.899 55.000 23.70 0.00 0.00 1.73
8399 8854 0.179137 CAGCGACGCACAGAGGATAA 60.179 55.000 23.70 0.00 0.00 1.75
8400 8855 1.433471 CAGCGACGCACAGAGGATA 59.567 57.895 23.70 0.00 0.00 2.59
8401 8856 2.182791 CAGCGACGCACAGAGGAT 59.817 61.111 23.70 0.00 0.00 3.24
8402 8857 4.724602 GCAGCGACGCACAGAGGA 62.725 66.667 23.70 0.00 0.00 3.71
8403 8858 4.731612 AGCAGCGACGCACAGAGG 62.732 66.667 23.70 5.03 0.00 3.69
8404 8859 3.476646 CAGCAGCGACGCACAGAG 61.477 66.667 23.70 7.21 0.00 3.35
8405 8860 4.284860 ACAGCAGCGACGCACAGA 62.285 61.111 23.70 0.00 0.00 3.41
8406 8861 3.771491 GACAGCAGCGACGCACAG 61.771 66.667 23.70 12.79 0.00 3.66
8418 8873 3.426568 GCAAGGACCTGCGACAGC 61.427 66.667 0.00 0.00 45.41 4.40
8419 8874 2.743928 GGCAAGGACCTGCGACAG 60.744 66.667 0.00 0.00 43.60 3.51
8420 8875 4.680237 CGGCAAGGACCTGCGACA 62.680 66.667 0.00 0.00 43.60 4.35
8441 8896 4.708968 GAGGATAGAGCGCGGCGG 62.709 72.222 25.03 5.97 0.00 6.13
8442 8897 4.708968 GGAGGATAGAGCGCGGCG 62.709 72.222 19.62 19.62 0.00 6.46
8443 8898 4.365505 GGGAGGATAGAGCGCGGC 62.366 72.222 8.83 0.00 0.00 6.53
8444 8899 4.044484 CGGGAGGATAGAGCGCGG 62.044 72.222 8.83 0.00 34.84 6.46
8445 8900 4.708968 GCGGGAGGATAGAGCGCG 62.709 72.222 0.00 0.00 40.35 6.86
8446 8901 4.365505 GGCGGGAGGATAGAGCGC 62.366 72.222 0.00 0.00 0.00 5.92
8447 8902 2.912542 TGGCGGGAGGATAGAGCG 60.913 66.667 0.00 0.00 0.00 5.03
8448 8903 2.737830 GTGGCGGGAGGATAGAGC 59.262 66.667 0.00 0.00 0.00 4.09
8449 8904 2.565645 CGGTGGCGGGAGGATAGAG 61.566 68.421 0.00 0.00 0.00 2.43
8450 8905 2.520982 CGGTGGCGGGAGGATAGA 60.521 66.667 0.00 0.00 0.00 1.98
8451 8906 4.301027 GCGGTGGCGGGAGGATAG 62.301 72.222 0.00 0.00 0.00 2.08
8487 8942 4.996434 GATGGGGATGAGCGGCGG 62.996 72.222 9.78 0.00 0.00 6.13
8490 8945 3.933722 AGCGATGGGGATGAGCGG 61.934 66.667 0.00 0.00 0.00 5.52
8491 8946 2.664185 CAGCGATGGGGATGAGCG 60.664 66.667 0.00 0.00 0.00 5.03
8492 8947 1.153086 AACAGCGATGGGGATGAGC 60.153 57.895 5.32 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.