Multiple sequence alignment - TraesCS2A01G201600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G201600 chr2A 100.000 4229 0 0 1 4229 174798920 174794692 0.000000e+00 7810.0
1 TraesCS2A01G201600 chr2A 100.000 2250 0 0 4802 7051 174794119 174791870 0.000000e+00 4156.0
2 TraesCS2A01G201600 chr2A 92.857 98 7 0 4805 4902 174793959 174793862 7.370000e-30 143.0
3 TraesCS2A01G201600 chr2A 92.857 98 7 0 4962 5059 174794116 174794019 7.370000e-30 143.0
4 TraesCS2A01G201600 chr2D 92.411 2095 119 21 1 2076 174597910 174595837 0.000000e+00 2952.0
5 TraesCS2A01G201600 chr2D 92.536 844 35 8 5633 6465 174582093 174581267 0.000000e+00 1184.0
6 TraesCS2A01G201600 chr2D 92.540 630 41 5 3116 3744 174591558 174590934 0.000000e+00 898.0
7 TraesCS2A01G201600 chr2D 86.675 818 78 14 2321 3122 174595732 174594930 0.000000e+00 878.0
8 TraesCS2A01G201600 chr2D 85.312 320 41 5 5276 5592 174589700 174589384 6.820000e-85 326.0
9 TraesCS2A01G201600 chr2B 92.753 1435 72 15 5053 6466 222590022 222588599 0.000000e+00 2045.0
10 TraesCS2A01G201600 chr2B 95.950 1210 40 6 2930 4136 222592229 222591026 0.000000e+00 1954.0
11 TraesCS2A01G201600 chr2B 95.761 1203 27 11 876 2076 222594153 222592973 0.000000e+00 1917.0
12 TraesCS2A01G201600 chr2B 94.514 401 19 3 2327 2726 222592875 222592477 3.610000e-172 616.0
13 TraesCS2A01G201600 chr2B 94.857 175 9 0 2771 2945 222592478 222592304 2.510000e-69 274.0
14 TraesCS2A01G201600 chr2B 93.478 92 5 1 4131 4222 222590738 222590648 1.230000e-27 135.0
15 TraesCS2A01G201600 chr2B 88.158 76 3 1 2075 2144 417500837 417500762 1.260000e-12 86.1
16 TraesCS2A01G201600 chr2B 97.727 44 1 0 5017 5060 222590076 222590033 7.580000e-10 76.8
17 TraesCS2A01G201600 chr2B 95.349 43 2 0 4860 4902 222590076 222590034 1.270000e-07 69.4
18 TraesCS2A01G201600 chr6A 98.822 594 2 3 6463 7051 393548295 393547702 0.000000e+00 1053.0
19 TraesCS2A01G201600 chr1D 96.674 451 10 1 6472 6917 104213015 104212565 0.000000e+00 745.0
20 TraesCS2A01G201600 chr1D 93.151 73 3 2 2250 2322 110339033 110338963 9.670000e-19 106.0
21 TraesCS2A01G201600 chr1D 85.556 90 12 1 359 448 463005698 463005610 7.530000e-15 93.5
22 TraesCS2A01G201600 chr7B 85.409 562 67 13 1 550 652554371 652554929 2.850000e-158 569.0
23 TraesCS2A01G201600 chr7A 80.925 346 58 8 15 356 53871978 53872319 4.190000e-67 267.0
24 TraesCS2A01G201600 chr3B 80.115 347 61 8 1 343 41579344 41579686 1.170000e-62 252.0
25 TraesCS2A01G201600 chr3B 95.455 66 3 0 2257 2322 42630818 42630883 9.670000e-19 106.0
26 TraesCS2A01G201600 chr5D 74.346 573 126 17 6490 7050 453123306 453122743 2.560000e-54 224.0
27 TraesCS2A01G201600 chr5D 95.588 68 3 0 2255 2322 241947608 241947541 7.480000e-20 110.0
28 TraesCS2A01G201600 chr5D 95.588 68 3 0 2255 2322 294634490 294634423 7.480000e-20 110.0
29 TraesCS2A01G201600 chr5D 89.610 77 6 1 2072 2148 459929774 459929848 5.820000e-16 97.1
30 TraesCS2A01G201600 chr6D 96.970 66 2 0 2257 2322 304099452 304099387 2.080000e-20 111.0
31 TraesCS2A01G201600 chr6D 89.855 69 5 2 2075 2141 178858014 178857946 3.500000e-13 87.9
32 TraesCS2A01G201600 chr6D 97.059 34 1 0 763 796 429976681 429976714 2.750000e-04 58.4
33 TraesCS2A01G201600 chr6B 96.970 66 2 0 2257 2322 469774337 469774272 2.080000e-20 111.0
34 TraesCS2A01G201600 chr4D 96.923 65 2 0 2258 2322 29833486 29833550 7.480000e-20 110.0
35 TraesCS2A01G201600 chr4A 82.927 123 19 2 357 478 665715391 665715270 7.480000e-20 110.0
36 TraesCS2A01G201600 chr4A 90.141 71 3 1 2075 2141 621127584 621127654 9.740000e-14 89.8
37 TraesCS2A01G201600 chr4A 89.189 74 3 2 2072 2140 683423461 683423534 3.500000e-13 87.9
38 TraesCS2A01G201600 chr3A 93.333 75 2 2 2074 2145 440635039 440634965 2.690000e-19 108.0
39 TraesCS2A01G201600 chr3A 95.455 66 3 0 2257 2322 34532449 34532514 9.670000e-19 106.0
40 TraesCS2A01G201600 chr3D 95.455 66 3 0 2257 2322 426451859 426451924 9.670000e-19 106.0
41 TraesCS2A01G201600 chr1B 79.605 152 22 7 3891 4038 313081458 313081604 4.500000e-17 100.0
42 TraesCS2A01G201600 chr4B 90.411 73 6 1 2070 2141 509914124 509914052 2.090000e-15 95.3
43 TraesCS2A01G201600 chrUn 91.176 68 4 1 2075 2142 93374799 93374734 2.710000e-14 91.6
44 TraesCS2A01G201600 chrUn 88.158 76 7 1 2066 2141 49143829 49143756 9.740000e-14 89.8
45 TraesCS2A01G201600 chr7D 86.765 68 8 1 17 83 51169718 51169785 2.730000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G201600 chr2A 174791870 174798920 7050 True 3063.0 7810 96.428500 1 7051 4 chr2A.!!$R1 7050
1 TraesCS2A01G201600 chr2D 174589384 174597910 8526 True 1263.5 2952 89.234500 1 5592 4 chr2D.!!$R2 5591
2 TraesCS2A01G201600 chr2D 174581267 174582093 826 True 1184.0 1184 92.536000 5633 6465 1 chr2D.!!$R1 832
3 TraesCS2A01G201600 chr2B 222588599 222594153 5554 True 885.9 2045 95.048625 876 6466 8 chr2B.!!$R2 5590
4 TraesCS2A01G201600 chr6A 393547702 393548295 593 True 1053.0 1053 98.822000 6463 7051 1 chr6A.!!$R1 588
5 TraesCS2A01G201600 chr7B 652554371 652554929 558 False 569.0 569 85.409000 1 550 1 chr7B.!!$F1 549
6 TraesCS2A01G201600 chr5D 453122743 453123306 563 True 224.0 224 74.346000 6490 7050 1 chr5D.!!$R3 560

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
737 750 0.105039 ACGCGAGGGAGATCCAAATC 59.895 55.0 15.93 0.0 38.24 2.17 F
2286 2323 0.107945 CCAGTGCTAGAAGCTCCCAC 60.108 60.0 0.00 0.0 42.97 4.61 F
2310 2347 0.029989 GGTAGGGTCTGGGGAAGGAT 60.030 60.0 0.00 0.0 0.00 3.24 F
3618 7140 1.169577 GGAGAGTCAGTTCAGAGCGA 58.830 55.0 0.00 0.0 0.00 4.93 F
4834 8834 0.035056 CATTTCCTTCCCACGCCTCT 60.035 55.0 0.00 0.0 0.00 3.69 F
4927 8927 0.105246 AGCTCGATTCCCCTCCATCT 60.105 55.0 0.00 0.0 0.00 2.90 F
4983 8983 0.323725 TGCCTCTGCATTTCCTTCCC 60.324 55.0 0.00 0.0 44.23 3.97 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2291 2328 0.029989 ATCCTTCCCCAGACCCTACC 60.030 60.000 0.00 0.0 0.00 3.18 R
4074 7622 0.035458 GGCAGTGGCTAGTCAAGTGT 59.965 55.000 9.90 0.0 40.87 3.55 R
4208 8208 1.251251 GTCTTCTTGCCCAATGCTGT 58.749 50.000 0.00 0.0 42.00 4.40 R
4899 8899 0.031994 GGAATCGAGCTGAGAGAGGC 59.968 60.000 0.00 0.0 0.00 4.70 R
5642 9869 1.745232 ACAGTTCGGCAGTTTTGTCA 58.255 45.000 0.00 0.0 0.00 3.58 R
5966 10197 2.159824 GCCTCTTTCAACTAGGCGTTTC 59.840 50.000 0.00 0.0 45.82 2.78 R
6066 10297 4.053295 CAAAAGTTTGATTCAGGCCACAG 58.947 43.478 5.01 0.0 40.55 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 5.125356 ACGAATTTGCTACATCCATCATGA 58.875 37.500 0.00 0.00 36.21 3.07
83 84 2.107750 ATCATGACGGAGCTGCGG 59.892 61.111 31.29 13.75 0.00 5.69
92 93 2.423898 GGAGCTGCGGCCTACTACA 61.424 63.158 15.55 0.00 39.73 2.74
101 102 2.890371 CCTACTACAACGGCGGCT 59.110 61.111 13.24 0.00 0.00 5.52
139 140 6.534634 ACAGTCCTCAAATTTTGCTACTACT 58.465 36.000 4.19 1.61 0.00 2.57
147 149 3.695830 TTTTGCTACTACTGGTGAGGG 57.304 47.619 0.00 0.00 0.00 4.30
159 161 3.157087 CTGGTGAGGGTTTTGCTACATT 58.843 45.455 0.00 0.00 0.00 2.71
233 235 6.932947 ACCGTCTTTAGATTTTGCTACTACT 58.067 36.000 0.00 0.00 0.00 2.57
235 237 7.033791 CCGTCTTTAGATTTTGCTACTACTGA 58.966 38.462 0.00 0.00 0.00 3.41
263 265 4.160252 GGTTTTTGCTACATCCATCATGGT 59.840 41.667 2.79 0.00 39.03 3.55
275 277 2.704596 CCATCATGGTGGAGATGAGACT 59.295 50.000 21.24 0.00 43.28 3.24
285 287 1.583967 GATGAGACTGGCGACGACG 60.584 63.158 2.12 2.12 42.93 5.12
336 338 1.246056 TTGTGCTACTACCGGCGAGT 61.246 55.000 9.30 13.70 0.00 4.18
397 399 5.643379 TTTTTCTGCTACATCCATGAACC 57.357 39.130 0.00 0.00 0.00 3.62
411 413 2.512485 TGAACCGCGTTGACTCTTTA 57.488 45.000 4.92 0.00 0.00 1.85
414 416 0.669625 ACCGCGTTGACTCTTTAGCC 60.670 55.000 4.92 0.00 0.00 3.93
415 417 1.359459 CCGCGTTGACTCTTTAGCCC 61.359 60.000 4.92 0.00 0.00 5.19
432 434 4.680237 CTCGCTCACGCAACCCCA 62.680 66.667 0.00 0.00 39.84 4.96
437 439 2.203408 TCACGCAACCCCATGCAA 60.203 55.556 0.00 0.00 46.76 4.08
451 453 0.108186 ATGCAACGAGCTTCGATGGA 60.108 50.000 11.64 11.20 45.40 3.41
453 455 1.424493 GCAACGAGCTTCGATGGAGG 61.424 60.000 11.64 0.00 43.74 4.30
455 457 0.970937 AACGAGCTTCGATGGAGGGA 60.971 55.000 11.64 0.00 43.74 4.20
496 498 2.548920 GGAAATACCATGGAGCGAGAGG 60.549 54.545 21.47 0.00 38.79 3.69
518 531 2.060980 GGTGAGGAGGAGATGCGGT 61.061 63.158 0.00 0.00 0.00 5.68
520 533 2.060383 TGAGGAGGAGATGCGGTGG 61.060 63.158 0.00 0.00 0.00 4.61
521 534 1.758514 GAGGAGGAGATGCGGTGGA 60.759 63.158 0.00 0.00 0.00 4.02
534 547 1.757699 GCGGTGGAAAGTAGGAGAGAT 59.242 52.381 0.00 0.00 0.00 2.75
559 572 2.801631 GGGTGAGGAGGAGATGCGG 61.802 68.421 0.00 0.00 0.00 5.69
561 574 3.531207 TGAGGAGGAGATGCGGCG 61.531 66.667 0.51 0.51 0.00 6.46
562 575 3.219928 GAGGAGGAGATGCGGCGA 61.220 66.667 12.98 0.00 0.00 5.54
564 577 1.228583 AGGAGGAGATGCGGCGATA 60.229 57.895 12.98 0.00 0.00 2.92
595 608 1.228552 GGTGACAATGCTGGGTGGT 60.229 57.895 0.00 0.00 0.00 4.16
597 610 0.537143 GTGACAATGCTGGGTGGTCA 60.537 55.000 0.00 0.00 36.24 4.02
599 612 0.250901 GACAATGCTGGGTGGTCAGT 60.251 55.000 0.00 0.00 37.12 3.41
606 619 2.159819 CTGGGTGGTCAGTGAGGACG 62.160 65.000 0.00 0.00 38.70 4.79
607 620 2.207924 GGGTGGTCAGTGAGGACGT 61.208 63.158 0.00 0.00 38.70 4.34
704 717 2.826725 GGGAAAGAAGAAGACGAGGAGA 59.173 50.000 0.00 0.00 0.00 3.71
705 718 3.367600 GGGAAAGAAGAAGACGAGGAGAC 60.368 52.174 0.00 0.00 0.00 3.36
720 733 1.135632 GGAGACAGGAAGAAGACGACG 60.136 57.143 0.00 0.00 0.00 5.12
727 740 1.919956 GAAGAAGACGACGCGAGGGA 61.920 60.000 15.93 0.00 0.00 4.20
737 750 0.105039 ACGCGAGGGAGATCCAAATC 59.895 55.000 15.93 0.00 38.24 2.17
738 751 0.601311 CGCGAGGGAGATCCAAATCC 60.601 60.000 0.00 0.00 38.24 3.01
742 755 2.092968 CGAGGGAGATCCAAATCCAACA 60.093 50.000 0.47 0.00 37.33 3.33
756 769 2.906897 AACAGTTGGTGCGGCTGG 60.907 61.111 0.00 0.00 34.79 4.85
757 770 4.954970 ACAGTTGGTGCGGCTGGG 62.955 66.667 0.00 0.00 34.79 4.45
758 771 4.641645 CAGTTGGTGCGGCTGGGA 62.642 66.667 0.00 0.00 0.00 4.37
759 772 4.335647 AGTTGGTGCGGCTGGGAG 62.336 66.667 0.00 0.00 0.00 4.30
778 791 3.526825 CCGATCGGCCGAAATTTTC 57.473 52.632 34.66 23.25 0.00 2.29
812 825 3.334078 GCCTAGTAGCGCACGTAAA 57.666 52.632 11.47 0.00 0.00 2.01
855 868 9.627395 GAAGCTAGTGGTATAGTATAACATGTG 57.373 37.037 11.05 5.77 0.00 3.21
909 932 0.820891 AACAAGTGTGAGCCAGCCAG 60.821 55.000 0.00 0.00 0.00 4.85
1217 1240 3.791586 GCTCCTGTCCCCCTCTGC 61.792 72.222 0.00 0.00 0.00 4.26
1608 1631 2.517875 GCCGCCAATGCCTCTGAT 60.518 61.111 0.00 0.00 0.00 2.90
1740 1763 1.526315 TCATCTGCCAGGATCCCAAT 58.474 50.000 8.55 0.00 0.00 3.16
1755 1778 2.173669 CAATGCGCTCTACCGGGTG 61.174 63.158 10.66 0.00 0.00 4.61
2066 2091 8.506437 CAGAGCACTCAATGTTAAATTCTTGTA 58.494 33.333 0.00 0.00 0.00 2.41
2084 2109 7.286215 TCTTGTATAAGAATTACTCCCTCCG 57.714 40.000 0.00 0.00 39.89 4.63
2085 2110 6.837568 TCTTGTATAAGAATTACTCCCTCCGT 59.162 38.462 0.00 0.00 39.89 4.69
2086 2111 6.645790 TGTATAAGAATTACTCCCTCCGTC 57.354 41.667 0.00 0.00 30.46 4.79
2087 2112 5.537674 TGTATAAGAATTACTCCCTCCGTCC 59.462 44.000 0.00 0.00 30.46 4.79
2088 2113 1.790818 AGAATTACTCCCTCCGTCCC 58.209 55.000 0.00 0.00 0.00 4.46
2089 2114 1.007963 AGAATTACTCCCTCCGTCCCA 59.992 52.381 0.00 0.00 0.00 4.37
2090 2115 2.047830 GAATTACTCCCTCCGTCCCAT 58.952 52.381 0.00 0.00 0.00 4.00
2091 2116 3.116862 AGAATTACTCCCTCCGTCCCATA 60.117 47.826 0.00 0.00 0.00 2.74
2092 2117 2.852714 TTACTCCCTCCGTCCCATAA 57.147 50.000 0.00 0.00 0.00 1.90
2093 2118 3.339713 TTACTCCCTCCGTCCCATAAT 57.660 47.619 0.00 0.00 0.00 1.28
2094 2119 4.474303 TTACTCCCTCCGTCCCATAATA 57.526 45.455 0.00 0.00 0.00 0.98
2095 2120 2.606378 ACTCCCTCCGTCCCATAATAC 58.394 52.381 0.00 0.00 0.00 1.89
2096 2121 2.090943 ACTCCCTCCGTCCCATAATACA 60.091 50.000 0.00 0.00 0.00 2.29
2097 2122 2.969950 CTCCCTCCGTCCCATAATACAA 59.030 50.000 0.00 0.00 0.00 2.41
2098 2123 2.969950 TCCCTCCGTCCCATAATACAAG 59.030 50.000 0.00 0.00 0.00 3.16
2099 2124 2.969950 CCCTCCGTCCCATAATACAAGA 59.030 50.000 0.00 0.00 0.00 3.02
2100 2125 3.006967 CCCTCCGTCCCATAATACAAGAG 59.993 52.174 0.00 0.00 0.00 2.85
2101 2126 3.555168 CCTCCGTCCCATAATACAAGAGC 60.555 52.174 0.00 0.00 0.00 4.09
2102 2127 2.035449 TCCGTCCCATAATACAAGAGCG 59.965 50.000 0.00 0.00 0.00 5.03
2103 2128 2.223971 CCGTCCCATAATACAAGAGCGT 60.224 50.000 0.00 0.00 0.00 5.07
2104 2129 3.454375 CGTCCCATAATACAAGAGCGTT 58.546 45.455 0.00 0.00 0.00 4.84
2105 2130 3.869246 CGTCCCATAATACAAGAGCGTTT 59.131 43.478 0.00 0.00 0.00 3.60
2106 2131 4.025979 CGTCCCATAATACAAGAGCGTTTC 60.026 45.833 0.00 0.00 0.00 2.78
2107 2132 4.873827 GTCCCATAATACAAGAGCGTTTCA 59.126 41.667 0.00 0.00 0.00 2.69
2108 2133 5.353123 GTCCCATAATACAAGAGCGTTTCAA 59.647 40.000 0.00 0.00 0.00 2.69
2109 2134 5.941058 TCCCATAATACAAGAGCGTTTCAAA 59.059 36.000 0.00 0.00 0.00 2.69
2110 2135 6.431543 TCCCATAATACAAGAGCGTTTCAAAA 59.568 34.615 0.00 0.00 0.00 2.44
2111 2136 7.040340 TCCCATAATACAAGAGCGTTTCAAAAA 60.040 33.333 0.00 0.00 0.00 1.94
2112 2137 7.759433 CCCATAATACAAGAGCGTTTCAAAAAT 59.241 33.333 0.00 0.00 0.00 1.82
2113 2138 8.586273 CCATAATACAAGAGCGTTTCAAAAATG 58.414 33.333 0.00 0.00 0.00 2.32
2114 2139 6.452244 AATACAAGAGCGTTTCAAAAATGC 57.548 33.333 8.25 8.25 0.00 3.56
2115 2140 4.045636 ACAAGAGCGTTTCAAAAATGCT 57.954 36.364 16.69 16.69 35.41 3.79
2116 2141 4.044426 ACAAGAGCGTTTCAAAAATGCTC 58.956 39.130 27.38 27.38 43.46 4.26
2123 2148 8.620533 GAGCGTTTCAAAAATGCTCTTATATT 57.379 30.769 27.36 5.34 41.60 1.28
2124 2149 9.716507 GAGCGTTTCAAAAATGCTCTTATATTA 57.283 29.630 27.36 0.00 41.60 0.98
2146 2171 4.119556 TGGGACAGAGGGAGTATCATAG 57.880 50.000 0.00 0.00 36.25 2.23
2158 2183 9.261035 GAGGGAGTATCATAGAAAGATGGATTA 57.739 37.037 0.00 0.00 36.25 1.75
2179 2204 8.512956 GGATTAAGGTGAAAAGAAAGTTAGGAC 58.487 37.037 0.00 0.00 0.00 3.85
2211 2248 7.827236 TGATTACCTTAGATTTTACACCACTGG 59.173 37.037 0.00 0.00 0.00 4.00
2221 2258 7.728532 AGATTTTACACCACTGGGATTACTTTT 59.271 33.333 0.00 0.00 38.05 2.27
2222 2259 7.663043 TTTTACACCACTGGGATTACTTTTT 57.337 32.000 0.00 0.00 38.05 1.94
2251 2288 5.983333 ATAAGGAATGACAGTCCAGGAAT 57.017 39.130 23.09 8.29 37.65 3.01
2252 2289 3.922171 AGGAATGACAGTCCAGGAATC 57.078 47.619 23.09 0.00 37.65 2.52
2253 2290 2.169352 AGGAATGACAGTCCAGGAATCG 59.831 50.000 23.09 0.00 37.65 3.34
2254 2291 2.168521 GGAATGACAGTCCAGGAATCGA 59.831 50.000 16.92 0.00 35.05 3.59
2255 2292 3.181461 GGAATGACAGTCCAGGAATCGAT 60.181 47.826 16.92 0.00 35.05 3.59
2256 2293 4.039245 GGAATGACAGTCCAGGAATCGATA 59.961 45.833 16.92 0.00 35.05 2.92
2257 2294 5.453339 GGAATGACAGTCCAGGAATCGATAA 60.453 44.000 16.92 0.00 35.05 1.75
2258 2295 5.614324 ATGACAGTCCAGGAATCGATAAA 57.386 39.130 0.00 0.00 0.00 1.40
2259 2296 5.011090 TGACAGTCCAGGAATCGATAAAG 57.989 43.478 0.00 0.00 0.00 1.85
2260 2297 4.141937 TGACAGTCCAGGAATCGATAAAGG 60.142 45.833 0.00 0.00 0.00 3.11
2261 2298 4.030913 ACAGTCCAGGAATCGATAAAGGA 58.969 43.478 0.00 1.32 0.00 3.36
2262 2299 4.141914 ACAGTCCAGGAATCGATAAAGGAC 60.142 45.833 21.94 21.94 43.26 3.85
2263 2300 4.030913 AGTCCAGGAATCGATAAAGGACA 58.969 43.478 26.96 3.85 44.87 4.02
2264 2301 4.100189 AGTCCAGGAATCGATAAAGGACAG 59.900 45.833 26.96 5.54 44.87 3.51
2265 2302 4.099573 GTCCAGGAATCGATAAAGGACAGA 59.900 45.833 23.39 4.53 42.65 3.41
2266 2303 4.099573 TCCAGGAATCGATAAAGGACAGAC 59.900 45.833 0.00 0.00 0.00 3.51
2267 2304 4.372656 CAGGAATCGATAAAGGACAGACC 58.627 47.826 0.00 0.00 39.35 3.85
2268 2305 3.388350 AGGAATCGATAAAGGACAGACCC 59.612 47.826 0.00 0.00 40.05 4.46
2269 2306 3.134081 GGAATCGATAAAGGACAGACCCA 59.866 47.826 0.00 0.00 40.05 4.51
2270 2307 4.372656 GAATCGATAAAGGACAGACCCAG 58.627 47.826 0.00 0.00 40.05 4.45
2271 2308 2.816411 TCGATAAAGGACAGACCCAGT 58.184 47.619 0.00 0.00 40.05 4.00
2272 2309 2.496070 TCGATAAAGGACAGACCCAGTG 59.504 50.000 0.00 0.00 40.05 3.66
2273 2310 2.633488 GATAAAGGACAGACCCAGTGC 58.367 52.381 0.00 0.00 40.05 4.40
2274 2311 1.729586 TAAAGGACAGACCCAGTGCT 58.270 50.000 0.00 0.00 39.47 4.40
2275 2312 1.729586 AAAGGACAGACCCAGTGCTA 58.270 50.000 0.00 0.00 36.61 3.49
2276 2313 1.270907 AAGGACAGACCCAGTGCTAG 58.729 55.000 0.00 0.00 36.61 3.42
2277 2314 0.409876 AGGACAGACCCAGTGCTAGA 59.590 55.000 0.00 0.00 35.81 2.43
2278 2315 1.203187 AGGACAGACCCAGTGCTAGAA 60.203 52.381 0.00 0.00 35.81 2.10
2279 2316 1.205893 GGACAGACCCAGTGCTAGAAG 59.794 57.143 0.00 0.00 0.00 2.85
2280 2317 0.610687 ACAGACCCAGTGCTAGAAGC 59.389 55.000 0.00 0.00 42.82 3.86
2281 2318 0.901124 CAGACCCAGTGCTAGAAGCT 59.099 55.000 0.00 0.00 42.97 3.74
2282 2319 1.134848 CAGACCCAGTGCTAGAAGCTC 60.135 57.143 0.00 0.00 42.97 4.09
2283 2320 0.176910 GACCCAGTGCTAGAAGCTCC 59.823 60.000 0.00 0.00 42.97 4.70
2284 2321 1.268283 ACCCAGTGCTAGAAGCTCCC 61.268 60.000 0.00 0.00 42.97 4.30
2285 2322 1.267574 CCCAGTGCTAGAAGCTCCCA 61.268 60.000 0.00 0.00 42.97 4.37
2286 2323 0.107945 CCAGTGCTAGAAGCTCCCAC 60.108 60.000 0.00 0.00 42.97 4.61
2287 2324 0.459237 CAGTGCTAGAAGCTCCCACG 60.459 60.000 0.00 0.00 42.97 4.94
2288 2325 1.811679 GTGCTAGAAGCTCCCACGC 60.812 63.158 0.00 0.00 42.97 5.34
2289 2326 2.282783 TGCTAGAAGCTCCCACGCA 61.283 57.895 0.00 0.00 42.97 5.24
2290 2327 1.079127 GCTAGAAGCTCCCACGCAA 60.079 57.895 0.00 0.00 38.45 4.85
2291 2328 1.086634 GCTAGAAGCTCCCACGCAAG 61.087 60.000 0.00 0.00 38.45 4.01
2292 2329 0.460987 CTAGAAGCTCCCACGCAAGG 60.461 60.000 0.00 0.00 46.39 3.61
2293 2330 1.192146 TAGAAGCTCCCACGCAAGGT 61.192 55.000 0.00 0.00 46.39 3.50
2294 2331 1.192146 AGAAGCTCCCACGCAAGGTA 61.192 55.000 0.00 0.00 46.39 3.08
2295 2332 0.741221 GAAGCTCCCACGCAAGGTAG 60.741 60.000 0.00 0.00 46.39 3.18
2296 2333 2.125106 GCTCCCACGCAAGGTAGG 60.125 66.667 0.00 0.00 46.39 3.18
2297 2334 2.584608 CTCCCACGCAAGGTAGGG 59.415 66.667 0.00 0.00 46.39 3.53
2298 2335 2.203877 TCCCACGCAAGGTAGGGT 60.204 61.111 0.00 0.00 46.39 4.34
2299 2336 2.240162 CTCCCACGCAAGGTAGGGTC 62.240 65.000 0.00 0.00 46.39 4.46
2300 2337 2.291043 CCCACGCAAGGTAGGGTCT 61.291 63.158 0.00 0.00 46.39 3.85
2301 2338 1.079127 CCACGCAAGGTAGGGTCTG 60.079 63.158 0.00 0.00 46.39 3.51
2302 2339 1.079127 CACGCAAGGTAGGGTCTGG 60.079 63.158 0.00 0.00 46.39 3.86
2303 2340 2.291043 ACGCAAGGTAGGGTCTGGG 61.291 63.158 0.00 0.00 46.39 4.45
2304 2341 2.998949 GCAAGGTAGGGTCTGGGG 59.001 66.667 0.00 0.00 0.00 4.96
2305 2342 1.615424 GCAAGGTAGGGTCTGGGGA 60.615 63.158 0.00 0.00 0.00 4.81
2306 2343 1.205460 GCAAGGTAGGGTCTGGGGAA 61.205 60.000 0.00 0.00 0.00 3.97
2307 2344 0.912486 CAAGGTAGGGTCTGGGGAAG 59.088 60.000 0.00 0.00 0.00 3.46
2308 2345 0.253207 AAGGTAGGGTCTGGGGAAGG 60.253 60.000 0.00 0.00 0.00 3.46
2309 2346 1.160289 AGGTAGGGTCTGGGGAAGGA 61.160 60.000 0.00 0.00 0.00 3.36
2310 2347 0.029989 GGTAGGGTCTGGGGAAGGAT 60.030 60.000 0.00 0.00 0.00 3.24
2311 2348 1.628327 GGTAGGGTCTGGGGAAGGATT 60.628 57.143 0.00 0.00 0.00 3.01
2312 2349 2.361070 GGTAGGGTCTGGGGAAGGATTA 60.361 54.545 0.00 0.00 0.00 1.75
2313 2350 2.918774 AGGGTCTGGGGAAGGATTAT 57.081 50.000 0.00 0.00 0.00 1.28
2314 2351 4.451760 GGTAGGGTCTGGGGAAGGATTATA 60.452 50.000 0.00 0.00 0.00 0.98
2315 2352 3.599348 AGGGTCTGGGGAAGGATTATAC 58.401 50.000 0.00 0.00 0.00 1.47
2316 2353 2.302157 GGGTCTGGGGAAGGATTATACG 59.698 54.545 0.00 0.00 0.00 3.06
2317 2354 3.236896 GGTCTGGGGAAGGATTATACGA 58.763 50.000 0.00 0.00 0.00 3.43
2318 2355 3.258622 GGTCTGGGGAAGGATTATACGAG 59.741 52.174 0.00 0.00 0.00 4.18
2319 2356 3.258622 GTCTGGGGAAGGATTATACGAGG 59.741 52.174 0.00 0.00 0.00 4.63
2320 2357 1.975680 TGGGGAAGGATTATACGAGGC 59.024 52.381 0.00 0.00 0.00 4.70
2321 2358 1.975680 GGGGAAGGATTATACGAGGCA 59.024 52.381 0.00 0.00 0.00 4.75
2322 2359 2.028020 GGGGAAGGATTATACGAGGCAG 60.028 54.545 0.00 0.00 0.00 4.85
2323 2360 2.633481 GGGAAGGATTATACGAGGCAGT 59.367 50.000 0.00 0.00 0.00 4.40
2324 2361 3.306156 GGGAAGGATTATACGAGGCAGTC 60.306 52.174 0.00 0.00 0.00 3.51
2325 2362 3.574826 GGAAGGATTATACGAGGCAGTCT 59.425 47.826 0.00 0.00 0.00 3.24
2326 2363 4.765856 GGAAGGATTATACGAGGCAGTCTA 59.234 45.833 0.00 0.00 0.00 2.59
2327 2364 5.106078 GGAAGGATTATACGAGGCAGTCTAG 60.106 48.000 0.00 0.00 0.00 2.43
2328 2365 4.337145 AGGATTATACGAGGCAGTCTAGG 58.663 47.826 0.00 0.00 0.00 3.02
2329 2366 4.043059 AGGATTATACGAGGCAGTCTAGGA 59.957 45.833 0.00 0.00 0.00 2.94
2330 2367 4.765856 GGATTATACGAGGCAGTCTAGGAA 59.234 45.833 0.00 0.00 0.00 3.36
2341 2378 4.381079 GGCAGTCTAGGAACCGATATCATC 60.381 50.000 3.12 0.00 0.00 2.92
2400 2440 4.901197 TGAAGGGCAACACTACAATCTA 57.099 40.909 0.00 0.00 39.74 1.98
2411 2451 7.569591 GCAACACTACAATCTACTGAAGTGAAC 60.570 40.741 7.24 0.00 38.14 3.18
2449 2489 5.961396 TTTGTTACGCATTTAAGGGCTTA 57.039 34.783 0.00 0.00 0.00 3.09
2454 2494 3.626930 ACGCATTTAAGGGCTTATTGGA 58.373 40.909 0.00 0.00 0.00 3.53
2628 2668 6.043358 GCAAACCCTTCCTCTACCTTATCTAT 59.957 42.308 0.00 0.00 0.00 1.98
2629 2669 7.672240 CAAACCCTTCCTCTACCTTATCTATC 58.328 42.308 0.00 0.00 0.00 2.08
2675 2722 3.961480 TTGTCTACTGTCCACATCCAG 57.039 47.619 0.00 0.00 34.82 3.86
2721 2768 2.559998 ACTTGTTTCCAGTTGCAACG 57.440 45.000 23.21 17.24 0.00 4.10
2727 2774 2.039818 TTCCAGTTGCAACGGTTACA 57.960 45.000 27.78 14.25 0.00 2.41
2728 2775 2.264005 TCCAGTTGCAACGGTTACAT 57.736 45.000 27.78 9.28 0.00 2.29
2737 2784 3.936453 TGCAACGGTTACATCTAATGTCC 59.064 43.478 0.00 0.00 43.67 4.02
2844 2893 2.104451 CAGTGGAGATAGGCAGCAGAAT 59.896 50.000 0.00 0.00 0.00 2.40
2929 2981 9.303116 AGAAGATCTCTAGAAAGTACAGTTTCA 57.697 33.333 11.16 0.00 38.66 2.69
2978 3120 5.902613 TTTTAAGCATCCCTCTGTTGATG 57.097 39.130 0.00 0.00 41.02 3.07
3001 3143 1.320507 TTAACACTTTTGCGGGTCCC 58.679 50.000 0.00 0.00 0.00 4.46
3045 3187 7.004555 TGCTCCTCAAGTCTTGATTAAGTTA 57.995 36.000 15.60 5.33 39.30 2.24
3156 6677 9.884465 CTTCCTTTTGTCAGATTTTGTTACTAG 57.116 33.333 0.00 0.00 0.00 2.57
3192 6714 3.230134 TGTTGCTTTTTAGCCATGGAGT 58.770 40.909 18.40 3.75 0.00 3.85
3206 6728 4.022849 GCCATGGAGTTTATAGTCAATGCC 60.023 45.833 18.40 0.00 34.86 4.40
3219 6741 4.074970 AGTCAATGCCATCTTTCTTTCGT 58.925 39.130 0.00 0.00 0.00 3.85
3330 6852 4.853924 TCAAGTTCTTGAAAATGAGGGC 57.146 40.909 12.08 0.00 0.00 5.19
3468 6990 2.780065 TGTTTGATGCACTTGTCAGC 57.220 45.000 0.00 0.00 0.00 4.26
3618 7140 1.169577 GGAGAGTCAGTTCAGAGCGA 58.830 55.000 0.00 0.00 0.00 4.93
3655 7177 5.641209 CAGAGAGAAATACAAAGGGTCAGTG 59.359 44.000 0.00 0.00 0.00 3.66
3812 7360 5.593679 TCTTACTGTTGCAGTATCCCTAC 57.406 43.478 9.44 0.00 44.85 3.18
3886 7434 8.616076 GCATAGTGAGATAGCAACATAGTTTTT 58.384 33.333 0.00 0.00 0.00 1.94
3942 7490 9.574516 CCCCTTCATTACTTTATAGCACTTATT 57.425 33.333 0.00 0.00 0.00 1.40
4010 7558 7.280876 TGTGATAGCAAATTAGATCACCACTTC 59.719 37.037 10.45 0.00 44.94 3.01
4141 8110 4.025015 CTGCAAGTTTGAGATATGCACC 57.975 45.455 0.00 0.00 41.67 5.01
4208 8208 4.274214 CAGACAAAGAAACAGAGCACATCA 59.726 41.667 0.00 0.00 0.00 3.07
4215 8215 2.195741 ACAGAGCACATCACAGCATT 57.804 45.000 0.00 0.00 0.00 3.56
4825 8825 3.271250 TGCCTCTGCATTTCCTTCC 57.729 52.632 0.00 0.00 44.23 3.46
4826 8826 0.323725 TGCCTCTGCATTTCCTTCCC 60.324 55.000 0.00 0.00 44.23 3.97
4827 8827 0.323725 GCCTCTGCATTTCCTTCCCA 60.324 55.000 0.00 0.00 37.47 4.37
4828 8828 1.467920 CCTCTGCATTTCCTTCCCAC 58.532 55.000 0.00 0.00 0.00 4.61
4829 8829 1.089920 CTCTGCATTTCCTTCCCACG 58.910 55.000 0.00 0.00 0.00 4.94
4830 8830 0.960364 TCTGCATTTCCTTCCCACGC 60.960 55.000 0.00 0.00 0.00 5.34
4831 8831 1.937546 CTGCATTTCCTTCCCACGCC 61.938 60.000 0.00 0.00 0.00 5.68
4832 8832 1.678970 GCATTTCCTTCCCACGCCT 60.679 57.895 0.00 0.00 0.00 5.52
4833 8833 1.657751 GCATTTCCTTCCCACGCCTC 61.658 60.000 0.00 0.00 0.00 4.70
4834 8834 0.035056 CATTTCCTTCCCACGCCTCT 60.035 55.000 0.00 0.00 0.00 3.69
4835 8835 0.253327 ATTTCCTTCCCACGCCTCTC 59.747 55.000 0.00 0.00 0.00 3.20
4836 8836 0.836400 TTTCCTTCCCACGCCTCTCT 60.836 55.000 0.00 0.00 0.00 3.10
4837 8837 1.544825 TTCCTTCCCACGCCTCTCTG 61.545 60.000 0.00 0.00 0.00 3.35
4838 8838 2.125350 CTTCCCACGCCTCTCTGC 60.125 66.667 0.00 0.00 0.00 4.26
4839 8839 3.672295 CTTCCCACGCCTCTCTGCC 62.672 68.421 0.00 0.00 0.00 4.85
4840 8840 4.704103 TCCCACGCCTCTCTGCCT 62.704 66.667 0.00 0.00 0.00 4.75
4841 8841 4.463879 CCCACGCCTCTCTGCCTG 62.464 72.222 0.00 0.00 0.00 4.85
4842 8842 3.699894 CCACGCCTCTCTGCCTGT 61.700 66.667 0.00 0.00 0.00 4.00
4843 8843 2.433838 CACGCCTCTCTGCCTGTG 60.434 66.667 0.00 0.00 0.00 3.66
4844 8844 3.699894 ACGCCTCTCTGCCTGTGG 61.700 66.667 0.00 0.00 0.00 4.17
4854 8854 2.045926 GCCTGTGGCGTCCAGAAT 60.046 61.111 7.03 0.00 39.62 2.40
4855 8855 1.675641 GCCTGTGGCGTCCAGAATT 60.676 57.895 7.03 0.00 39.62 2.17
4856 8856 1.244019 GCCTGTGGCGTCCAGAATTT 61.244 55.000 7.03 0.00 39.62 1.82
4857 8857 1.948611 GCCTGTGGCGTCCAGAATTTA 60.949 52.381 7.03 0.00 39.62 1.40
4858 8858 2.009774 CCTGTGGCGTCCAGAATTTAG 58.990 52.381 7.03 0.00 32.34 1.85
4859 8859 1.398390 CTGTGGCGTCCAGAATTTAGC 59.602 52.381 0.00 0.00 32.34 3.09
4860 8860 1.271108 TGTGGCGTCCAGAATTTAGCA 60.271 47.619 0.00 0.00 32.34 3.49
4861 8861 2.017049 GTGGCGTCCAGAATTTAGCAT 58.983 47.619 0.00 0.00 32.34 3.79
4862 8862 2.016318 TGGCGTCCAGAATTTAGCATG 58.984 47.619 0.00 0.00 0.00 4.06
4863 8863 1.334869 GGCGTCCAGAATTTAGCATGG 59.665 52.381 0.00 0.00 0.00 3.66
4864 8864 1.334869 GCGTCCAGAATTTAGCATGGG 59.665 52.381 0.00 0.00 33.45 4.00
4865 8865 1.949525 CGTCCAGAATTTAGCATGGGG 59.050 52.381 0.00 0.00 33.45 4.96
4866 8866 2.421388 CGTCCAGAATTTAGCATGGGGA 60.421 50.000 0.00 0.00 33.45 4.81
4867 8867 3.748668 CGTCCAGAATTTAGCATGGGGAT 60.749 47.826 0.00 0.00 33.45 3.85
4868 8868 3.571401 GTCCAGAATTTAGCATGGGGATG 59.429 47.826 0.00 0.00 33.45 3.51
4875 8875 2.042639 GCATGGGGATGCCAACCT 60.043 61.111 5.30 0.00 41.47 3.50
4876 8876 2.129785 GCATGGGGATGCCAACCTC 61.130 63.158 5.30 0.00 41.47 3.85
4877 8877 1.307309 CATGGGGATGCCAACCTCA 59.693 57.895 5.30 0.00 42.42 3.86
4878 8878 1.039233 CATGGGGATGCCAACCTCAC 61.039 60.000 5.30 0.00 40.94 3.51
4879 8879 2.043953 GGGGATGCCAACCTCACC 60.044 66.667 5.30 0.00 0.00 4.02
4880 8880 2.763215 GGGATGCCAACCTCACCA 59.237 61.111 0.00 0.00 0.00 4.17
4881 8881 1.307647 GGGATGCCAACCTCACCAT 59.692 57.895 0.00 0.00 0.00 3.55
4882 8882 0.324645 GGGATGCCAACCTCACCATT 60.325 55.000 0.00 0.00 0.00 3.16
4883 8883 1.560505 GGATGCCAACCTCACCATTT 58.439 50.000 0.00 0.00 0.00 2.32
4884 8884 1.205417 GGATGCCAACCTCACCATTTG 59.795 52.381 0.00 0.00 0.00 2.32
4885 8885 1.205417 GATGCCAACCTCACCATTTGG 59.795 52.381 0.00 0.00 42.43 3.28
4886 8886 0.831288 TGCCAACCTCACCATTTGGG 60.831 55.000 0.96 0.00 40.26 4.12
4887 8887 1.974543 CCAACCTCACCATTTGGGC 59.025 57.895 0.96 0.00 42.05 5.36
4888 8888 1.586028 CAACCTCACCATTTGGGCG 59.414 57.895 0.96 0.00 42.05 6.13
4889 8889 2.275380 AACCTCACCATTTGGGCGC 61.275 57.895 0.00 0.00 42.05 6.53
4890 8890 3.451894 CCTCACCATTTGGGCGCC 61.452 66.667 21.18 21.18 42.05 6.53
4891 8891 2.676121 CTCACCATTTGGGCGCCA 60.676 61.111 30.85 12.04 42.05 5.69
4892 8892 2.203552 TCACCATTTGGGCGCCAA 60.204 55.556 30.85 16.59 42.29 4.52
4893 8893 2.048316 CACCATTTGGGCGCCAAC 60.048 61.111 30.85 12.89 43.82 3.77
4894 8894 2.522923 ACCATTTGGGCGCCAACA 60.523 55.556 30.85 15.86 43.82 3.33
4895 8895 2.262292 CCATTTGGGCGCCAACAG 59.738 61.111 30.85 13.39 43.82 3.16
4896 8896 2.262292 CATTTGGGCGCCAACAGG 59.738 61.111 30.85 8.35 43.82 4.00
4897 8897 2.117206 ATTTGGGCGCCAACAGGA 59.883 55.556 30.85 10.74 43.82 3.86
4898 8898 1.305213 ATTTGGGCGCCAACAGGAT 60.305 52.632 30.85 12.53 43.82 3.24
4899 8899 1.606885 ATTTGGGCGCCAACAGGATG 61.607 55.000 30.85 0.00 43.82 3.51
4903 8903 3.512516 GCGCCAACAGGATGCCTC 61.513 66.667 0.00 0.00 42.53 4.70
4904 8904 2.270205 CGCCAACAGGATGCCTCT 59.730 61.111 0.00 0.00 42.53 3.69
4905 8905 1.817099 CGCCAACAGGATGCCTCTC 60.817 63.158 0.00 0.00 42.53 3.20
4906 8906 1.606531 GCCAACAGGATGCCTCTCT 59.393 57.895 0.00 0.00 42.53 3.10
4907 8907 0.463474 GCCAACAGGATGCCTCTCTC 60.463 60.000 0.00 0.00 42.53 3.20
4912 8912 0.390124 CAGGATGCCTCTCTCAGCTC 59.610 60.000 0.00 0.00 0.00 4.09
4927 8927 0.105246 AGCTCGATTCCCCTCCATCT 60.105 55.000 0.00 0.00 0.00 2.90
4934 8934 2.040043 CCCCTCCATCTCCTGGCT 60.040 66.667 0.00 0.00 45.52 4.75
4946 8946 1.130054 TCCTGGCTATCTCCCATGCC 61.130 60.000 0.00 0.00 45.10 4.40
4947 8947 1.132554 CCTGGCTATCTCCCATGCCT 61.133 60.000 0.00 0.00 45.11 4.75
4948 8948 1.649321 CTGGCTATCTCCCATGCCTA 58.351 55.000 0.00 0.00 45.11 3.93
4949 8949 1.277557 CTGGCTATCTCCCATGCCTAC 59.722 57.143 0.00 0.00 45.11 3.18
4950 8950 1.132721 TGGCTATCTCCCATGCCTACT 60.133 52.381 0.00 0.00 45.11 2.57
4951 8951 1.277557 GGCTATCTCCCATGCCTACTG 59.722 57.143 0.00 0.00 41.92 2.74
4952 8952 2.251818 GCTATCTCCCATGCCTACTGA 58.748 52.381 0.00 0.00 0.00 3.41
4953 8953 2.836981 GCTATCTCCCATGCCTACTGAT 59.163 50.000 0.00 0.00 0.00 2.90
4954 8954 4.026744 GCTATCTCCCATGCCTACTGATA 58.973 47.826 0.00 0.00 0.00 2.15
4955 8955 4.653341 GCTATCTCCCATGCCTACTGATAT 59.347 45.833 0.00 0.00 0.00 1.63
4956 8956 5.130145 GCTATCTCCCATGCCTACTGATATT 59.870 44.000 0.00 0.00 0.00 1.28
4957 8957 6.352565 GCTATCTCCCATGCCTACTGATATTT 60.353 42.308 0.00 0.00 0.00 1.40
4958 8958 5.489792 TCTCCCATGCCTACTGATATTTC 57.510 43.478 0.00 0.00 0.00 2.17
4959 8959 4.287067 TCTCCCATGCCTACTGATATTTCC 59.713 45.833 0.00 0.00 0.00 3.13
4960 8960 3.330701 TCCCATGCCTACTGATATTTCCC 59.669 47.826 0.00 0.00 0.00 3.97
4961 8961 3.331889 CCCATGCCTACTGATATTTCCCT 59.668 47.826 0.00 0.00 0.00 4.20
4962 8962 4.566488 CCCATGCCTACTGATATTTCCCTC 60.566 50.000 0.00 0.00 0.00 4.30
4963 8963 4.566488 CCATGCCTACTGATATTTCCCTCC 60.566 50.000 0.00 0.00 0.00 4.30
4964 8964 3.941629 TGCCTACTGATATTTCCCTCCT 58.058 45.455 0.00 0.00 0.00 3.69
4965 8965 3.648067 TGCCTACTGATATTTCCCTCCTG 59.352 47.826 0.00 0.00 0.00 3.86
4966 8966 3.558109 GCCTACTGATATTTCCCTCCTGC 60.558 52.174 0.00 0.00 0.00 4.85
4967 8967 3.008485 CCTACTGATATTTCCCTCCTGCC 59.992 52.174 0.00 0.00 0.00 4.85
4968 8968 2.781667 ACTGATATTTCCCTCCTGCCT 58.218 47.619 0.00 0.00 0.00 4.75
4969 8969 2.708325 ACTGATATTTCCCTCCTGCCTC 59.292 50.000 0.00 0.00 0.00 4.70
4970 8970 2.978278 CTGATATTTCCCTCCTGCCTCT 59.022 50.000 0.00 0.00 0.00 3.69
4971 8971 2.707791 TGATATTTCCCTCCTGCCTCTG 59.292 50.000 0.00 0.00 0.00 3.35
4972 8972 0.839946 TATTTCCCTCCTGCCTCTGC 59.160 55.000 0.00 0.00 38.26 4.26
4982 8982 3.271250 TGCCTCTGCATTTCCTTCC 57.729 52.632 0.00 0.00 44.23 3.46
4983 8983 0.323725 TGCCTCTGCATTTCCTTCCC 60.324 55.000 0.00 0.00 44.23 3.97
4984 8984 0.323725 GCCTCTGCATTTCCTTCCCA 60.324 55.000 0.00 0.00 37.47 4.37
4985 8985 1.467920 CCTCTGCATTTCCTTCCCAC 58.532 55.000 0.00 0.00 0.00 4.61
4986 8986 1.089920 CTCTGCATTTCCTTCCCACG 58.910 55.000 0.00 0.00 0.00 4.94
4987 8987 0.400213 TCTGCATTTCCTTCCCACGT 59.600 50.000 0.00 0.00 0.00 4.49
4988 8988 0.804989 CTGCATTTCCTTCCCACGTC 59.195 55.000 0.00 0.00 0.00 4.34
4989 8989 0.400213 TGCATTTCCTTCCCACGTCT 59.600 50.000 0.00 0.00 0.00 4.18
4990 8990 1.087501 GCATTTCCTTCCCACGTCTC 58.912 55.000 0.00 0.00 0.00 3.36
4991 8991 1.739067 CATTTCCTTCCCACGTCTCC 58.261 55.000 0.00 0.00 0.00 3.71
4992 8992 0.618981 ATTTCCTTCCCACGTCTCCC 59.381 55.000 0.00 0.00 0.00 4.30
4993 8993 0.473117 TTTCCTTCCCACGTCTCCCT 60.473 55.000 0.00 0.00 0.00 4.20
5064 9250 1.252904 GCCAACAGGATGCCACATGT 61.253 55.000 0.00 0.00 42.53 3.21
5134 9323 8.812972 ACACCATTATATAGTCACCATAACGAT 58.187 33.333 0.00 0.00 0.00 3.73
5213 9402 7.064371 CAGTTAGTTTCAGATGACCAAGATGAG 59.936 40.741 0.00 0.00 0.00 2.90
5214 9403 5.752036 AGTTTCAGATGACCAAGATGAGA 57.248 39.130 0.00 0.00 0.00 3.27
5215 9404 6.119240 AGTTTCAGATGACCAAGATGAGAA 57.881 37.500 0.00 0.00 0.00 2.87
5216 9405 6.719301 AGTTTCAGATGACCAAGATGAGAAT 58.281 36.000 0.00 0.00 0.00 2.40
5217 9406 6.598457 AGTTTCAGATGACCAAGATGAGAATG 59.402 38.462 0.00 0.00 0.00 2.67
5218 9407 5.945144 TCAGATGACCAAGATGAGAATGA 57.055 39.130 0.00 0.00 0.00 2.57
5265 9455 6.107343 GGTAGACCTTTGAGGACTTGATAAC 58.893 44.000 4.41 0.00 40.69 1.89
5314 9532 1.600023 TGGACAAGCCAACTTAACCG 58.400 50.000 0.00 0.00 45.87 4.44
5568 9788 4.131596 ACTTGGCAAACTAAGTCGCTTTA 58.868 39.130 0.00 0.00 31.88 1.85
5571 9791 5.291293 TGGCAAACTAAGTCGCTTTATTC 57.709 39.130 0.00 0.00 0.00 1.75
5573 9793 5.086727 GGCAAACTAAGTCGCTTTATTCAC 58.913 41.667 0.00 0.00 0.00 3.18
5585 9807 9.167311 AGTCGCTTTATTCACAAGATATTTTCT 57.833 29.630 0.00 0.00 35.70 2.52
5629 9856 6.639632 TTTATGCTCTTAATTGATGGGAGC 57.360 37.500 0.00 0.00 46.41 4.70
5642 9869 5.387113 TGATGGGAGCATATAGTTTTGGT 57.613 39.130 0.00 0.00 0.00 3.67
5687 9914 4.921515 TGTTACGTAAGATCAACTGCTGTC 59.078 41.667 8.60 0.00 43.62 3.51
5709 9938 3.119602 CGTCGGAAGAGTTCAATCTGGTA 60.120 47.826 0.00 0.00 43.49 3.25
5710 9939 4.174762 GTCGGAAGAGTTCAATCTGGTAC 58.825 47.826 0.00 0.00 43.49 3.34
5722 9951 2.613026 TCTGGTACGGTATGCAATGG 57.387 50.000 0.00 0.00 35.30 3.16
5737 9966 2.159014 GCAATGGCATGTGGAATGTCAT 60.159 45.455 0.00 0.00 45.21 3.06
5772 10001 7.522073 GCAAGAAACTCAAGGAATTGTATGACA 60.522 37.037 0.00 0.00 0.00 3.58
5966 10197 3.751175 TCAAGCTGTTGATTAACCGGAAG 59.249 43.478 9.46 0.00 37.79 3.46
6066 10297 3.206964 GGCTAGGCAGTAGGATTGTTTC 58.793 50.000 12.16 0.00 0.00 2.78
6220 10456 6.246163 TCTTGAGTAGATACACTGGAGTCAA 58.754 40.000 0.00 0.00 30.53 3.18
6244 10495 8.711457 CAACATTGAAGAACTCTGTTTTGTTTT 58.289 29.630 0.00 0.00 0.00 2.43
6245 10496 8.243289 ACATTGAAGAACTCTGTTTTGTTTTG 57.757 30.769 0.00 0.00 0.00 2.44
6246 10497 7.872483 ACATTGAAGAACTCTGTTTTGTTTTGT 59.128 29.630 0.00 0.00 0.00 2.83
6247 10498 7.636259 TTGAAGAACTCTGTTTTGTTTTGTG 57.364 32.000 0.00 0.00 0.00 3.33
6248 10499 6.744112 TGAAGAACTCTGTTTTGTTTTGTGT 58.256 32.000 0.00 0.00 0.00 3.72
6249 10500 7.206687 TGAAGAACTCTGTTTTGTTTTGTGTT 58.793 30.769 0.00 0.00 0.00 3.32
6250 10501 7.708752 TGAAGAACTCTGTTTTGTTTTGTGTTT 59.291 29.630 0.00 0.00 0.00 2.83
6251 10502 8.432110 AAGAACTCTGTTTTGTTTTGTGTTTT 57.568 26.923 0.00 0.00 0.00 2.43
6252 10503 7.850501 AGAACTCTGTTTTGTTTTGTGTTTTG 58.149 30.769 0.00 0.00 0.00 2.44
6253 10504 7.494298 AGAACTCTGTTTTGTTTTGTGTTTTGT 59.506 29.630 0.00 0.00 0.00 2.83
6254 10505 8.649973 AACTCTGTTTTGTTTTGTGTTTTGTA 57.350 26.923 0.00 0.00 0.00 2.41
6255 10506 8.825667 ACTCTGTTTTGTTTTGTGTTTTGTAT 57.174 26.923 0.00 0.00 0.00 2.29
6256 10507 8.921670 ACTCTGTTTTGTTTTGTGTTTTGTATC 58.078 29.630 0.00 0.00 0.00 2.24
6295 10546 2.983229 AGCTTGTCAGGATGTCATGTC 58.017 47.619 0.00 0.00 33.41 3.06
6385 10639 7.503902 GGAATTATCTAAGGGAAGCAATCTTGT 59.496 37.037 0.00 0.00 31.48 3.16
6386 10640 7.814264 ATTATCTAAGGGAAGCAATCTTGTG 57.186 36.000 0.00 0.00 31.48 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 2.847435 AAGCCGCCGTTGTAGTAGGC 62.847 60.000 0.00 0.00 46.88 3.93
117 118 5.940470 CCAGTAGTAGCAAAATTTGAGGACT 59.060 40.000 10.26 10.57 0.00 3.85
139 140 2.969821 ATGTAGCAAAACCCTCACCA 57.030 45.000 0.00 0.00 0.00 4.17
147 149 3.792956 CGCCATGATGAATGTAGCAAAAC 59.207 43.478 0.00 0.00 34.11 2.43
159 161 1.044790 TCTCAGCTCCGCCATGATGA 61.045 55.000 0.00 0.00 0.00 2.92
233 235 4.016444 GGATGTAGCAAAAACCCTCATCA 58.984 43.478 0.00 0.00 34.01 3.07
235 237 4.046286 TGGATGTAGCAAAAACCCTCAT 57.954 40.909 0.00 0.00 0.00 2.90
263 265 1.657751 CGTCGCCAGTCTCATCTCCA 61.658 60.000 0.00 0.00 0.00 3.86
285 287 0.452987 TGCAGCAAAATCATCTCGCC 59.547 50.000 0.00 0.00 0.00 5.54
319 321 1.226603 CACTCGCCGGTAGTAGCAC 60.227 63.158 10.74 0.00 0.00 4.40
336 338 7.064847 GCAAAAATCATGGATGTAGCAAAATCA 59.935 33.333 0.00 0.00 0.00 2.57
397 399 0.389948 AGGGCTAAAGAGTCAACGCG 60.390 55.000 3.53 3.53 0.00 6.01
432 434 0.108186 TCCATCGAAGCTCGTTGCAT 60.108 50.000 0.00 0.00 45.94 3.96
437 439 1.379977 TCCCTCCATCGAAGCTCGT 60.380 57.895 0.00 0.00 41.35 4.18
478 480 1.967066 CTCCTCTCGCTCCATGGTATT 59.033 52.381 12.58 0.00 0.00 1.89
479 481 1.626686 CTCCTCTCGCTCCATGGTAT 58.373 55.000 12.58 0.00 0.00 2.73
496 498 1.406860 GCATCTCCTCCTCACCCCTC 61.407 65.000 0.00 0.00 0.00 4.30
518 531 4.219115 CCTGCTATCTCTCCTACTTTCCA 58.781 47.826 0.00 0.00 0.00 3.53
520 533 3.576550 CCCCTGCTATCTCTCCTACTTTC 59.423 52.174 0.00 0.00 0.00 2.62
521 534 3.582164 CCCCTGCTATCTCTCCTACTTT 58.418 50.000 0.00 0.00 0.00 2.66
534 547 2.243774 CTCCTCCTCACCCCCTGCTA 62.244 65.000 0.00 0.00 0.00 3.49
559 572 3.712881 GTCGGCCGCCATTATCGC 61.713 66.667 23.51 0.00 0.00 4.58
561 574 3.041940 CCGTCGGCCGCCATTATC 61.042 66.667 23.51 3.46 34.38 1.75
562 575 3.857038 ACCGTCGGCCGCCATTAT 61.857 61.111 23.51 0.00 34.38 1.28
571 584 2.742372 AGCATTGTCACCGTCGGC 60.742 61.111 12.28 0.00 0.00 5.54
595 608 3.680786 CGGCCACGTCCTCACTGA 61.681 66.667 2.24 0.00 34.81 3.41
597 610 3.374402 CTCGGCCACGTCCTCACT 61.374 66.667 2.24 0.00 41.85 3.41
599 612 4.671590 TCCTCGGCCACGTCCTCA 62.672 66.667 2.24 0.00 41.85 3.86
606 619 4.373116 TTGCTCGTCCTCGGCCAC 62.373 66.667 2.24 0.00 37.69 5.01
607 620 4.069232 CTTGCTCGTCCTCGGCCA 62.069 66.667 2.24 0.00 37.69 5.36
631 644 4.394712 GCTCACCAGACACCCCCG 62.395 72.222 0.00 0.00 0.00 5.73
688 701 2.040545 TCCTGTCTCCTCGTCTTCTTCT 59.959 50.000 0.00 0.00 0.00 2.85
704 717 1.081376 CGCGTCGTCTTCTTCCTGT 60.081 57.895 0.00 0.00 0.00 4.00
705 718 0.794981 CTCGCGTCGTCTTCTTCCTG 60.795 60.000 5.77 0.00 0.00 3.86
720 733 0.469917 TGGATTTGGATCTCCCTCGC 59.530 55.000 0.00 0.00 35.38 5.03
738 751 2.332514 CAGCCGCACCAACTGTTG 59.667 61.111 13.50 13.50 0.00 3.33
742 755 4.335647 CTCCCAGCCGCACCAACT 62.336 66.667 0.00 0.00 0.00 3.16
760 773 3.526825 GAAAATTTCGGCCGATCGG 57.473 52.632 31.56 30.03 38.57 4.18
836 849 7.866393 GTGACTCCACATGTTATACTATACCAC 59.134 40.741 0.00 0.00 42.72 4.16
855 868 2.657237 CCACAGGTCGGTGACTCC 59.343 66.667 2.94 0.00 41.32 3.85
1183 1206 1.153823 GCAGGAAGAGTAGCGCGAA 60.154 57.895 12.10 0.00 0.00 4.70
1704 1727 1.052124 TGAACACGTGGTCCCTTCCT 61.052 55.000 29.74 0.00 0.00 3.36
1755 1778 1.097547 CATTGCTGATCCGGTCCACC 61.098 60.000 0.00 0.00 0.00 4.61
2066 2091 3.902467 GGGACGGAGGGAGTAATTCTTAT 59.098 47.826 0.00 0.00 0.00 1.73
2076 2101 2.605257 TGTATTATGGGACGGAGGGAG 58.395 52.381 0.00 0.00 0.00 4.30
2077 2102 2.779429 TGTATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
2078 2103 2.969950 TCTTGTATTATGGGACGGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
2079 2104 3.555168 GCTCTTGTATTATGGGACGGAGG 60.555 52.174 0.00 0.00 0.00 4.30
2080 2105 3.654414 GCTCTTGTATTATGGGACGGAG 58.346 50.000 0.00 0.00 0.00 4.63
2081 2106 2.035449 CGCTCTTGTATTATGGGACGGA 59.965 50.000 0.00 0.00 0.00 4.69
2082 2107 2.223971 ACGCTCTTGTATTATGGGACGG 60.224 50.000 0.00 0.00 0.00 4.79
2083 2108 3.093717 ACGCTCTTGTATTATGGGACG 57.906 47.619 0.00 0.00 0.00 4.79
2084 2109 4.873827 TGAAACGCTCTTGTATTATGGGAC 59.126 41.667 0.00 0.00 0.00 4.46
2085 2110 5.092554 TGAAACGCTCTTGTATTATGGGA 57.907 39.130 0.00 0.00 0.00 4.37
2086 2111 5.811399 TTGAAACGCTCTTGTATTATGGG 57.189 39.130 0.00 0.00 0.00 4.00
2087 2112 8.586273 CATTTTTGAAACGCTCTTGTATTATGG 58.414 33.333 0.00 0.00 0.00 2.74
2088 2113 8.103924 GCATTTTTGAAACGCTCTTGTATTATG 58.896 33.333 0.00 0.00 0.00 1.90
2089 2114 8.028938 AGCATTTTTGAAACGCTCTTGTATTAT 58.971 29.630 0.00 0.00 0.00 1.28
2090 2115 7.367285 AGCATTTTTGAAACGCTCTTGTATTA 58.633 30.769 0.00 0.00 0.00 0.98
2091 2116 6.215845 AGCATTTTTGAAACGCTCTTGTATT 58.784 32.000 0.00 0.00 0.00 1.89
2092 2117 5.772521 AGCATTTTTGAAACGCTCTTGTAT 58.227 33.333 0.00 0.00 0.00 2.29
2093 2118 5.181690 AGCATTTTTGAAACGCTCTTGTA 57.818 34.783 0.00 0.00 0.00 2.41
2094 2119 4.044426 GAGCATTTTTGAAACGCTCTTGT 58.956 39.130 12.57 0.00 44.47 3.16
2095 2120 4.619931 GAGCATTTTTGAAACGCTCTTG 57.380 40.909 12.57 0.00 44.47 3.02
2105 2130 9.639563 TGTCCCATAATATAAGAGCATTTTTGA 57.360 29.630 0.00 0.00 0.00 2.69
2106 2131 9.903682 CTGTCCCATAATATAAGAGCATTTTTG 57.096 33.333 0.00 0.00 0.00 2.44
2107 2132 9.866655 TCTGTCCCATAATATAAGAGCATTTTT 57.133 29.630 0.00 0.00 0.00 1.94
2108 2133 9.512588 CTCTGTCCCATAATATAAGAGCATTTT 57.487 33.333 0.00 0.00 0.00 1.82
2109 2134 8.105829 CCTCTGTCCCATAATATAAGAGCATTT 58.894 37.037 0.00 0.00 0.00 2.32
2110 2135 7.311549 CCCTCTGTCCCATAATATAAGAGCATT 60.312 40.741 0.00 0.00 0.00 3.56
2111 2136 6.157645 CCCTCTGTCCCATAATATAAGAGCAT 59.842 42.308 0.00 0.00 0.00 3.79
2112 2137 5.485353 CCCTCTGTCCCATAATATAAGAGCA 59.515 44.000 0.00 0.00 0.00 4.26
2113 2138 5.721960 TCCCTCTGTCCCATAATATAAGAGC 59.278 44.000 0.00 0.00 0.00 4.09
2114 2139 6.957020 ACTCCCTCTGTCCCATAATATAAGAG 59.043 42.308 0.00 0.00 0.00 2.85
2115 2140 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
2116 2141 8.846423 ATACTCCCTCTGTCCCATAATATAAG 57.154 38.462 0.00 0.00 0.00 1.73
2117 2142 8.406643 TGATACTCCCTCTGTCCCATAATATAA 58.593 37.037 0.00 0.00 0.00 0.98
2118 2143 7.950803 TGATACTCCCTCTGTCCCATAATATA 58.049 38.462 0.00 0.00 0.00 0.86
2119 2144 6.815880 TGATACTCCCTCTGTCCCATAATAT 58.184 40.000 0.00 0.00 0.00 1.28
2120 2145 6.227624 TGATACTCCCTCTGTCCCATAATA 57.772 41.667 0.00 0.00 0.00 0.98
2121 2146 5.093236 TGATACTCCCTCTGTCCCATAAT 57.907 43.478 0.00 0.00 0.00 1.28
2122 2147 4.552883 TGATACTCCCTCTGTCCCATAA 57.447 45.455 0.00 0.00 0.00 1.90
2123 2148 4.767000 ATGATACTCCCTCTGTCCCATA 57.233 45.455 0.00 0.00 0.00 2.74
2124 2149 3.645053 ATGATACTCCCTCTGTCCCAT 57.355 47.619 0.00 0.00 0.00 4.00
2125 2150 3.727391 TCTATGATACTCCCTCTGTCCCA 59.273 47.826 0.00 0.00 0.00 4.37
2126 2151 4.390129 TCTATGATACTCCCTCTGTCCC 57.610 50.000 0.00 0.00 0.00 4.46
2127 2152 6.071984 TCTTTCTATGATACTCCCTCTGTCC 58.928 44.000 0.00 0.00 0.00 4.02
2128 2153 7.309744 CCATCTTTCTATGATACTCCCTCTGTC 60.310 44.444 0.00 0.00 0.00 3.51
2129 2154 6.496565 CCATCTTTCTATGATACTCCCTCTGT 59.503 42.308 0.00 0.00 0.00 3.41
2130 2155 6.723515 TCCATCTTTCTATGATACTCCCTCTG 59.276 42.308 0.00 0.00 0.00 3.35
2131 2156 6.868826 TCCATCTTTCTATGATACTCCCTCT 58.131 40.000 0.00 0.00 0.00 3.69
2132 2157 7.732222 ATCCATCTTTCTATGATACTCCCTC 57.268 40.000 0.00 0.00 0.00 4.30
2133 2158 9.621239 TTAATCCATCTTTCTATGATACTCCCT 57.379 33.333 0.00 0.00 0.00 4.20
2134 2159 9.883142 CTTAATCCATCTTTCTATGATACTCCC 57.117 37.037 0.00 0.00 0.00 4.30
2135 2160 9.883142 CCTTAATCCATCTTTCTATGATACTCC 57.117 37.037 0.00 0.00 0.00 3.85
2146 2171 9.631452 CTTTCTTTTCACCTTAATCCATCTTTC 57.369 33.333 0.00 0.00 0.00 2.62
2202 2231 4.340950 CACAAAAAGTAATCCCAGTGGTGT 59.659 41.667 8.74 0.00 0.00 4.16
2203 2232 4.340950 ACACAAAAAGTAATCCCAGTGGTG 59.659 41.667 8.74 0.00 0.00 4.17
2221 2258 7.227873 TGGACTGTCATTCCTTATTTACACAA 58.772 34.615 10.38 0.00 33.84 3.33
2222 2259 6.774673 TGGACTGTCATTCCTTATTTACACA 58.225 36.000 10.38 0.00 33.84 3.72
2251 2288 2.496070 CACTGGGTCTGTCCTTTATCGA 59.504 50.000 0.00 0.00 36.25 3.59
2252 2289 2.893637 CACTGGGTCTGTCCTTTATCG 58.106 52.381 0.00 0.00 36.25 2.92
2253 2290 2.237392 AGCACTGGGTCTGTCCTTTATC 59.763 50.000 0.00 0.00 36.25 1.75
2254 2291 2.269940 AGCACTGGGTCTGTCCTTTAT 58.730 47.619 0.00 0.00 36.25 1.40
2255 2292 1.729586 AGCACTGGGTCTGTCCTTTA 58.270 50.000 0.00 0.00 36.25 1.85
2256 2293 1.625818 CTAGCACTGGGTCTGTCCTTT 59.374 52.381 0.00 0.00 36.25 3.11
2257 2294 1.203187 TCTAGCACTGGGTCTGTCCTT 60.203 52.381 0.00 0.00 36.25 3.36
2258 2295 0.409876 TCTAGCACTGGGTCTGTCCT 59.590 55.000 0.00 0.00 36.25 3.85
2259 2296 1.205893 CTTCTAGCACTGGGTCTGTCC 59.794 57.143 0.00 0.00 0.00 4.02
2260 2297 1.404851 GCTTCTAGCACTGGGTCTGTC 60.405 57.143 0.00 0.00 41.89 3.51
2261 2298 0.610687 GCTTCTAGCACTGGGTCTGT 59.389 55.000 0.00 0.00 41.89 3.41
2262 2299 0.901124 AGCTTCTAGCACTGGGTCTG 59.099 55.000 1.09 0.00 45.56 3.51
2263 2300 1.190643 GAGCTTCTAGCACTGGGTCT 58.809 55.000 1.09 0.00 45.56 3.85
2264 2301 0.176910 GGAGCTTCTAGCACTGGGTC 59.823 60.000 1.09 0.00 45.56 4.46
2265 2302 1.268283 GGGAGCTTCTAGCACTGGGT 61.268 60.000 1.09 0.00 45.56 4.51
2266 2303 1.267574 TGGGAGCTTCTAGCACTGGG 61.268 60.000 1.09 0.00 45.56 4.45
2267 2304 0.107945 GTGGGAGCTTCTAGCACTGG 60.108 60.000 1.09 0.00 45.56 4.00
2268 2305 0.459237 CGTGGGAGCTTCTAGCACTG 60.459 60.000 1.09 0.00 45.56 3.66
2269 2306 1.893786 CGTGGGAGCTTCTAGCACT 59.106 57.895 1.09 0.00 45.56 4.40
2270 2307 1.811679 GCGTGGGAGCTTCTAGCAC 60.812 63.158 1.09 0.00 45.56 4.40
2271 2308 1.826340 TTGCGTGGGAGCTTCTAGCA 61.826 55.000 5.67 5.67 45.56 3.49
2272 2309 1.079127 TTGCGTGGGAGCTTCTAGC 60.079 57.895 0.00 0.00 42.84 3.42
2273 2310 0.460987 CCTTGCGTGGGAGCTTCTAG 60.461 60.000 0.00 0.00 38.13 2.43
2274 2311 1.192146 ACCTTGCGTGGGAGCTTCTA 61.192 55.000 0.00 0.00 38.13 2.10
2275 2312 1.192146 TACCTTGCGTGGGAGCTTCT 61.192 55.000 0.00 0.00 38.13 2.85
2276 2313 0.741221 CTACCTTGCGTGGGAGCTTC 60.741 60.000 0.00 0.00 38.13 3.86
2277 2314 1.296715 CTACCTTGCGTGGGAGCTT 59.703 57.895 0.00 0.00 38.13 3.74
2278 2315 2.660064 CCTACCTTGCGTGGGAGCT 61.660 63.158 1.73 0.00 45.98 4.09
2279 2316 2.125106 CCTACCTTGCGTGGGAGC 60.125 66.667 1.73 0.00 45.98 4.70
2280 2317 2.240162 GACCCTACCTTGCGTGGGAG 62.240 65.000 3.70 0.33 45.98 4.30
2281 2318 2.203877 ACCCTACCTTGCGTGGGA 60.204 61.111 3.70 0.00 45.98 4.37
2282 2319 2.267961 GACCCTACCTTGCGTGGG 59.732 66.667 0.00 0.00 42.75 4.61
2283 2320 1.079127 CAGACCCTACCTTGCGTGG 60.079 63.158 0.00 0.00 0.00 4.94
2284 2321 1.079127 CCAGACCCTACCTTGCGTG 60.079 63.158 0.00 0.00 0.00 5.34
2285 2322 2.291043 CCCAGACCCTACCTTGCGT 61.291 63.158 0.00 0.00 0.00 5.24
2286 2323 2.584608 CCCAGACCCTACCTTGCG 59.415 66.667 0.00 0.00 0.00 4.85
2287 2324 1.205460 TTCCCCAGACCCTACCTTGC 61.205 60.000 0.00 0.00 0.00 4.01
2288 2325 0.912486 CTTCCCCAGACCCTACCTTG 59.088 60.000 0.00 0.00 0.00 3.61
2289 2326 0.253207 CCTTCCCCAGACCCTACCTT 60.253 60.000 0.00 0.00 0.00 3.50
2290 2327 1.160289 TCCTTCCCCAGACCCTACCT 61.160 60.000 0.00 0.00 0.00 3.08
2291 2328 0.029989 ATCCTTCCCCAGACCCTACC 60.030 60.000 0.00 0.00 0.00 3.18
2292 2329 1.894699 AATCCTTCCCCAGACCCTAC 58.105 55.000 0.00 0.00 0.00 3.18
2293 2330 4.755106 CGTATAATCCTTCCCCAGACCCTA 60.755 50.000 0.00 0.00 0.00 3.53
2294 2331 2.918774 ATAATCCTTCCCCAGACCCT 57.081 50.000 0.00 0.00 0.00 4.34
2295 2332 2.302157 CGTATAATCCTTCCCCAGACCC 59.698 54.545 0.00 0.00 0.00 4.46
2296 2333 3.236896 TCGTATAATCCTTCCCCAGACC 58.763 50.000 0.00 0.00 0.00 3.85
2297 2334 3.258622 CCTCGTATAATCCTTCCCCAGAC 59.741 52.174 0.00 0.00 0.00 3.51
2298 2335 3.507411 CCTCGTATAATCCTTCCCCAGA 58.493 50.000 0.00 0.00 0.00 3.86
2299 2336 2.028020 GCCTCGTATAATCCTTCCCCAG 60.028 54.545 0.00 0.00 0.00 4.45
2300 2337 1.975680 GCCTCGTATAATCCTTCCCCA 59.024 52.381 0.00 0.00 0.00 4.96
2301 2338 1.975680 TGCCTCGTATAATCCTTCCCC 59.024 52.381 0.00 0.00 0.00 4.81
2302 2339 2.633481 ACTGCCTCGTATAATCCTTCCC 59.367 50.000 0.00 0.00 0.00 3.97
2303 2340 3.574826 AGACTGCCTCGTATAATCCTTCC 59.425 47.826 0.00 0.00 0.00 3.46
2304 2341 4.857509 AGACTGCCTCGTATAATCCTTC 57.142 45.455 0.00 0.00 0.00 3.46
2305 2342 4.767928 CCTAGACTGCCTCGTATAATCCTT 59.232 45.833 0.00 0.00 0.00 3.36
2306 2343 4.043059 TCCTAGACTGCCTCGTATAATCCT 59.957 45.833 0.00 0.00 0.00 3.24
2307 2344 4.333690 TCCTAGACTGCCTCGTATAATCC 58.666 47.826 0.00 0.00 0.00 3.01
2308 2345 5.335819 GGTTCCTAGACTGCCTCGTATAATC 60.336 48.000 0.00 0.00 0.00 1.75
2309 2346 4.523558 GGTTCCTAGACTGCCTCGTATAAT 59.476 45.833 0.00 0.00 0.00 1.28
2310 2347 3.887716 GGTTCCTAGACTGCCTCGTATAA 59.112 47.826 0.00 0.00 0.00 0.98
2311 2348 3.484407 GGTTCCTAGACTGCCTCGTATA 58.516 50.000 0.00 0.00 0.00 1.47
2312 2349 2.308690 GGTTCCTAGACTGCCTCGTAT 58.691 52.381 0.00 0.00 0.00 3.06
2313 2350 1.760192 GGTTCCTAGACTGCCTCGTA 58.240 55.000 0.00 0.00 0.00 3.43
2314 2351 1.313812 CGGTTCCTAGACTGCCTCGT 61.314 60.000 0.00 0.00 0.00 4.18
2315 2352 1.030488 TCGGTTCCTAGACTGCCTCG 61.030 60.000 0.00 0.00 0.00 4.63
2316 2353 1.404843 ATCGGTTCCTAGACTGCCTC 58.595 55.000 0.00 0.00 0.00 4.70
2317 2354 2.750141 TATCGGTTCCTAGACTGCCT 57.250 50.000 0.00 0.00 0.00 4.75
2318 2355 2.891580 TGATATCGGTTCCTAGACTGCC 59.108 50.000 0.00 0.00 0.00 4.85
2319 2356 4.739195 GATGATATCGGTTCCTAGACTGC 58.261 47.826 0.00 0.00 0.00 4.40
2341 2378 3.054948 TGGACTCCTGGTTAAATTACCCG 60.055 47.826 0.00 0.00 37.39 5.28
2400 2440 5.126061 GGCCAATATCAATGTTCACTTCAGT 59.874 40.000 0.00 0.00 0.00 3.41
2411 2451 6.292274 GCGTAACAAATTGGCCAATATCAATG 60.292 38.462 30.84 23.36 34.28 2.82
2449 2489 5.426689 TCTCAGCAACTTCTGTATCCAAT 57.573 39.130 0.00 0.00 35.63 3.16
2454 2494 6.883217 ACATCAATTCTCAGCAACTTCTGTAT 59.117 34.615 0.00 0.00 35.63 2.29
2509 2549 7.548427 TGTGATTTTGAAAAGATTGTGCTTTGA 59.452 29.630 0.00 0.00 38.08 2.69
2578 2618 3.837213 ATTGTGGAAGCATTTGTCTCG 57.163 42.857 0.00 0.00 0.00 4.04
2628 2668 5.966935 AGTAGATGAATGAAAGAGAAGGGGA 59.033 40.000 0.00 0.00 0.00 4.81
2629 2669 6.054295 CAGTAGATGAATGAAAGAGAAGGGG 58.946 44.000 0.00 0.00 0.00 4.79
2675 2722 4.019919 TGAATGCAGCTTAAAATCTCGC 57.980 40.909 0.00 0.00 0.00 5.03
2721 2768 9.924650 ATTAAGTATCGGACATTAGATGTAACC 57.075 33.333 0.00 0.00 45.03 2.85
2727 2774 9.337396 TGCAAAATTAAGTATCGGACATTAGAT 57.663 29.630 0.00 0.00 0.00 1.98
2728 2775 8.725405 TGCAAAATTAAGTATCGGACATTAGA 57.275 30.769 0.00 0.00 0.00 2.10
2769 2816 6.681729 TTGTTACCTTCAGTCTTGTCCTAT 57.318 37.500 0.00 0.00 0.00 2.57
2844 2893 2.237143 AGCGTGGAATCTCAAGAATGGA 59.763 45.455 0.00 0.00 0.00 3.41
2924 2976 8.068977 TGCTGTTAATTGCATGATTTTTGAAAC 58.931 29.630 0.00 0.00 33.94 2.78
2978 3120 2.792674 GACCCGCAAAAGTGTTAAAAGC 59.207 45.455 0.00 0.00 0.00 3.51
2984 3126 0.475044 TAGGGACCCGCAAAAGTGTT 59.525 50.000 4.40 0.00 0.00 3.32
3001 3143 8.680903 AGGAGCAACATTTTGAGATTACAATAG 58.319 33.333 0.00 0.00 34.24 1.73
3156 6677 1.668047 GCAACAAAGAGGATGCACTGC 60.668 52.381 0.00 0.00 38.63 4.40
3192 6714 8.397906 CGAAAGAAAGATGGCATTGACTATAAA 58.602 33.333 0.00 0.00 0.00 1.40
3330 6852 6.373779 GGCTCCATGTTTTATGATTACATCG 58.626 40.000 0.00 0.00 37.87 3.84
3549 7071 1.008538 GGCCTTGCTTGTGTCAACG 60.009 57.895 0.00 0.00 0.00 4.10
3618 7140 9.206690 TGTATTTCTCTCTGATACTCCAGAATT 57.793 33.333 0.00 0.00 42.05 2.17
3655 7177 4.880696 AGCATGAACTAAGAAAGATGGAGC 59.119 41.667 0.00 0.00 0.00 4.70
3796 7343 0.899019 TGCGTAGGGATACTGCAACA 59.101 50.000 0.00 0.00 31.69 3.33
3812 7360 6.972901 TGTACTCTGTATAAAAGATCACTGCG 59.027 38.462 0.00 0.00 0.00 5.18
3840 7388 8.972127 ACTATGCTATTCTGGGTGTATATACAG 58.028 37.037 15.93 4.79 36.78 2.74
3886 7434 5.416013 TCGCCACAAAATTCATTACACCATA 59.584 36.000 0.00 0.00 0.00 2.74
3942 7490 1.110518 TCGCCTCACCATACGCCATA 61.111 55.000 0.00 0.00 0.00 2.74
3943 7491 2.108976 CGCCTCACCATACGCCAT 59.891 61.111 0.00 0.00 0.00 4.40
3944 7492 3.071837 TCGCCTCACCATACGCCA 61.072 61.111 0.00 0.00 0.00 5.69
4022 7570 8.845227 TGTTGTCAACATGTCATACAAAGTTAT 58.155 29.630 14.48 0.00 36.25 1.89
4073 7621 1.151668 GCAGTGGCTAGTCAAGTGTG 58.848 55.000 0.00 0.00 36.96 3.82
4074 7622 0.035458 GGCAGTGGCTAGTCAAGTGT 59.965 55.000 9.90 0.00 40.87 3.55
4208 8208 1.251251 GTCTTCTTGCCCAATGCTGT 58.749 50.000 0.00 0.00 42.00 4.40
4808 8808 0.323725 TGGGAAGGAAATGCAGAGGC 60.324 55.000 0.00 0.00 41.68 4.70
4809 8809 1.467920 GTGGGAAGGAAATGCAGAGG 58.532 55.000 0.00 0.00 0.00 3.69
4810 8810 1.089920 CGTGGGAAGGAAATGCAGAG 58.910 55.000 0.00 0.00 0.00 3.35
4811 8811 0.960364 GCGTGGGAAGGAAATGCAGA 60.960 55.000 0.00 0.00 0.00 4.26
4812 8812 1.508088 GCGTGGGAAGGAAATGCAG 59.492 57.895 0.00 0.00 0.00 4.41
4813 8813 1.976474 GGCGTGGGAAGGAAATGCA 60.976 57.895 0.00 0.00 0.00 3.96
4814 8814 1.657751 GAGGCGTGGGAAGGAAATGC 61.658 60.000 0.00 0.00 0.00 3.56
4815 8815 0.035056 AGAGGCGTGGGAAGGAAATG 60.035 55.000 0.00 0.00 0.00 2.32
4816 8816 0.253327 GAGAGGCGTGGGAAGGAAAT 59.747 55.000 0.00 0.00 0.00 2.17
4817 8817 0.836400 AGAGAGGCGTGGGAAGGAAA 60.836 55.000 0.00 0.00 0.00 3.13
4818 8818 1.229209 AGAGAGGCGTGGGAAGGAA 60.229 57.895 0.00 0.00 0.00 3.36
4819 8819 1.984570 CAGAGAGGCGTGGGAAGGA 60.985 63.158 0.00 0.00 0.00 3.36
4820 8820 2.581354 CAGAGAGGCGTGGGAAGG 59.419 66.667 0.00 0.00 0.00 3.46
4821 8821 2.125350 GCAGAGAGGCGTGGGAAG 60.125 66.667 0.00 0.00 0.00 3.46
4822 8822 3.706373 GGCAGAGAGGCGTGGGAA 61.706 66.667 0.00 0.00 33.57 3.97
4837 8837 1.244019 AAATTCTGGACGCCACAGGC 61.244 55.000 0.00 0.00 46.75 4.85
4838 8838 2.009774 CTAAATTCTGGACGCCACAGG 58.990 52.381 2.37 0.00 36.62 4.00
4839 8839 1.398390 GCTAAATTCTGGACGCCACAG 59.602 52.381 0.00 0.00 37.30 3.66
4840 8840 1.271108 TGCTAAATTCTGGACGCCACA 60.271 47.619 0.00 0.00 0.00 4.17
4841 8841 1.448985 TGCTAAATTCTGGACGCCAC 58.551 50.000 0.00 0.00 0.00 5.01
4842 8842 2.016318 CATGCTAAATTCTGGACGCCA 58.984 47.619 0.00 0.00 0.00 5.69
4843 8843 1.334869 CCATGCTAAATTCTGGACGCC 59.665 52.381 0.00 0.00 0.00 5.68
4844 8844 1.334869 CCCATGCTAAATTCTGGACGC 59.665 52.381 0.00 0.00 0.00 5.19
4845 8845 1.949525 CCCCATGCTAAATTCTGGACG 59.050 52.381 0.00 0.00 0.00 4.79
4846 8846 3.297134 TCCCCATGCTAAATTCTGGAC 57.703 47.619 0.00 0.00 0.00 4.02
4847 8847 3.836146 CATCCCCATGCTAAATTCTGGA 58.164 45.455 0.00 0.00 0.00 3.86
4859 8859 1.039233 GTGAGGTTGGCATCCCCATG 61.039 60.000 10.97 0.00 44.89 3.66
4860 8860 1.307647 GTGAGGTTGGCATCCCCAT 59.692 57.895 10.97 0.00 44.89 4.00
4861 8861 2.763215 GTGAGGTTGGCATCCCCA 59.237 61.111 10.97 2.62 43.51 4.96
4862 8862 2.043953 GGTGAGGTTGGCATCCCC 60.044 66.667 10.97 0.00 0.00 4.81
4863 8863 0.324645 AATGGTGAGGTTGGCATCCC 60.325 55.000 10.97 3.28 0.00 3.85
4864 8864 1.205417 CAAATGGTGAGGTTGGCATCC 59.795 52.381 6.48 6.48 0.00 3.51
4865 8865 1.205417 CCAAATGGTGAGGTTGGCATC 59.795 52.381 0.00 0.00 35.72 3.91
4866 8866 1.269012 CCAAATGGTGAGGTTGGCAT 58.731 50.000 0.00 0.00 35.72 4.40
4867 8867 0.831288 CCCAAATGGTGAGGTTGGCA 60.831 55.000 0.00 0.00 40.46 4.92
4868 8868 1.974543 CCCAAATGGTGAGGTTGGC 59.025 57.895 0.00 0.00 40.46 4.52
4869 8869 1.974543 GCCCAAATGGTGAGGTTGG 59.025 57.895 0.00 0.00 41.30 3.77
4876 8876 2.048316 GTTGGCGCCCAAATGGTG 60.048 61.111 26.77 0.00 45.73 4.17
4877 8877 2.522923 TGTTGGCGCCCAAATGGT 60.523 55.556 26.77 0.00 45.73 3.55
4878 8878 2.262292 CTGTTGGCGCCCAAATGG 59.738 61.111 26.77 5.36 45.73 3.16
4879 8879 1.606885 ATCCTGTTGGCGCCCAAATG 61.607 55.000 26.77 10.16 45.73 2.32
4880 8880 1.305213 ATCCTGTTGGCGCCCAAAT 60.305 52.632 26.77 9.02 45.73 2.32
4881 8881 2.117206 ATCCTGTTGGCGCCCAAA 59.883 55.556 26.77 10.05 45.73 3.28
4882 8882 2.676121 CATCCTGTTGGCGCCCAA 60.676 61.111 26.77 15.66 41.69 4.12
4886 8886 3.512516 GAGGCATCCTGTTGGCGC 61.513 66.667 0.00 0.00 46.11 6.53
4887 8887 1.817099 GAGAGGCATCCTGTTGGCG 60.817 63.158 0.00 0.00 46.11 5.69
4888 8888 0.463474 GAGAGAGGCATCCTGTTGGC 60.463 60.000 0.00 0.00 42.18 4.52
4889 8889 0.907486 TGAGAGAGGCATCCTGTTGG 59.093 55.000 0.00 0.00 31.76 3.77
4890 8890 1.743091 GCTGAGAGAGGCATCCTGTTG 60.743 57.143 0.00 0.00 31.76 3.33
4891 8891 0.540923 GCTGAGAGAGGCATCCTGTT 59.459 55.000 0.00 0.00 31.76 3.16
4892 8892 0.325484 AGCTGAGAGAGGCATCCTGT 60.325 55.000 0.00 0.00 31.76 4.00
4893 8893 0.390124 GAGCTGAGAGAGGCATCCTG 59.610 60.000 0.00 0.00 31.76 3.86
4894 8894 1.108727 CGAGCTGAGAGAGGCATCCT 61.109 60.000 0.00 0.00 36.03 3.24
4895 8895 1.106351 TCGAGCTGAGAGAGGCATCC 61.106 60.000 0.00 0.00 0.00 3.51
4896 8896 0.961019 ATCGAGCTGAGAGAGGCATC 59.039 55.000 0.00 0.00 0.00 3.91
4897 8897 1.340889 GAATCGAGCTGAGAGAGGCAT 59.659 52.381 0.00 0.00 0.00 4.40
4898 8898 0.743688 GAATCGAGCTGAGAGAGGCA 59.256 55.000 0.00 0.00 0.00 4.75
4899 8899 0.031994 GGAATCGAGCTGAGAGAGGC 59.968 60.000 0.00 0.00 0.00 4.70
4900 8900 0.673437 GGGAATCGAGCTGAGAGAGG 59.327 60.000 0.00 0.00 0.00 3.69
4901 8901 0.673437 GGGGAATCGAGCTGAGAGAG 59.327 60.000 0.00 0.00 0.00 3.20
4902 8902 0.260230 AGGGGAATCGAGCTGAGAGA 59.740 55.000 0.00 0.00 0.00 3.10
4903 8903 0.673437 GAGGGGAATCGAGCTGAGAG 59.327 60.000 0.00 0.00 0.00 3.20
4904 8904 0.757188 GGAGGGGAATCGAGCTGAGA 60.757 60.000 0.00 0.00 0.00 3.27
4905 8905 1.045350 TGGAGGGGAATCGAGCTGAG 61.045 60.000 0.00 0.00 0.00 3.35
4906 8906 0.399091 ATGGAGGGGAATCGAGCTGA 60.399 55.000 0.00 0.00 0.00 4.26
4907 8907 0.034616 GATGGAGGGGAATCGAGCTG 59.965 60.000 0.00 0.00 0.00 4.24
4912 8912 0.683973 CAGGAGATGGAGGGGAATCG 59.316 60.000 0.00 0.00 0.00 3.34
4927 8927 1.130054 GGCATGGGAGATAGCCAGGA 61.130 60.000 0.00 0.00 46.26 3.86
4934 8934 6.156949 GGAAATATCAGTAGGCATGGGAGATA 59.843 42.308 0.00 0.00 0.00 1.98
4946 8946 3.906846 AGGCAGGAGGGAAATATCAGTAG 59.093 47.826 0.00 0.00 0.00 2.57
4947 8947 3.904339 GAGGCAGGAGGGAAATATCAGTA 59.096 47.826 0.00 0.00 0.00 2.74
4948 8948 2.708325 GAGGCAGGAGGGAAATATCAGT 59.292 50.000 0.00 0.00 0.00 3.41
4949 8949 2.978278 AGAGGCAGGAGGGAAATATCAG 59.022 50.000 0.00 0.00 0.00 2.90
4950 8950 2.707791 CAGAGGCAGGAGGGAAATATCA 59.292 50.000 0.00 0.00 0.00 2.15
4951 8951 2.551938 GCAGAGGCAGGAGGGAAATATC 60.552 54.545 0.00 0.00 40.72 1.63
4952 8952 1.423161 GCAGAGGCAGGAGGGAAATAT 59.577 52.381 0.00 0.00 40.72 1.28
4953 8953 0.839946 GCAGAGGCAGGAGGGAAATA 59.160 55.000 0.00 0.00 40.72 1.40
4954 8954 1.611965 GCAGAGGCAGGAGGGAAAT 59.388 57.895 0.00 0.00 40.72 2.17
4955 8955 3.081554 GCAGAGGCAGGAGGGAAA 58.918 61.111 0.00 0.00 40.72 3.13
4965 8965 0.323725 TGGGAAGGAAATGCAGAGGC 60.324 55.000 0.00 0.00 41.68 4.70
4966 8966 1.467920 GTGGGAAGGAAATGCAGAGG 58.532 55.000 0.00 0.00 0.00 3.69
4967 8967 1.089920 CGTGGGAAGGAAATGCAGAG 58.910 55.000 0.00 0.00 0.00 3.35
4968 8968 0.400213 ACGTGGGAAGGAAATGCAGA 59.600 50.000 0.00 0.00 0.00 4.26
4969 8969 0.804989 GACGTGGGAAGGAAATGCAG 59.195 55.000 0.00 0.00 0.00 4.41
4970 8970 0.400213 AGACGTGGGAAGGAAATGCA 59.600 50.000 0.00 0.00 0.00 3.96
4971 8971 1.087501 GAGACGTGGGAAGGAAATGC 58.912 55.000 0.00 0.00 0.00 3.56
4972 8972 1.679032 GGGAGACGTGGGAAGGAAATG 60.679 57.143 0.00 0.00 0.00 2.32
4973 8973 0.618981 GGGAGACGTGGGAAGGAAAT 59.381 55.000 0.00 0.00 0.00 2.17
4974 8974 0.473117 AGGGAGACGTGGGAAGGAAA 60.473 55.000 0.00 0.00 0.00 3.13
4975 8975 1.157751 AGGGAGACGTGGGAAGGAA 59.842 57.895 0.00 0.00 0.00 3.36
4976 8976 1.609501 CAGGGAGACGTGGGAAGGA 60.610 63.158 0.00 0.00 42.41 3.36
4977 8977 2.982130 CAGGGAGACGTGGGAAGG 59.018 66.667 0.00 0.00 42.41 3.46
4978 8978 2.266055 GCAGGGAGACGTGGGAAG 59.734 66.667 0.00 0.00 46.11 3.46
4979 8979 3.319198 GGCAGGGAGACGTGGGAA 61.319 66.667 0.00 0.00 46.11 3.97
4980 8980 4.316823 AGGCAGGGAGACGTGGGA 62.317 66.667 0.00 0.00 46.11 4.37
4981 8981 4.087892 CAGGCAGGGAGACGTGGG 62.088 72.222 0.00 0.00 46.11 4.61
4982 8982 3.314331 ACAGGCAGGGAGACGTGG 61.314 66.667 0.00 0.00 46.11 4.94
4984 8984 3.314331 CCACAGGCAGGGAGACGT 61.314 66.667 0.00 0.00 0.00 4.34
5003 9003 1.215173 TCCCCATGCTCAATTTCGGAT 59.785 47.619 0.00 0.00 0.00 4.18
5005 9005 0.740737 GTCCCCATGCTCAATTTCGG 59.259 55.000 0.00 0.00 0.00 4.30
5006 9006 0.378257 CGTCCCCATGCTCAATTTCG 59.622 55.000 0.00 0.00 0.00 3.46
5013 9013 3.134127 GTTGGCGTCCCCATGCTC 61.134 66.667 0.00 0.00 44.89 4.26
5064 9250 0.321298 GGCCCTCGCAACAGAAGTTA 60.321 55.000 0.00 0.00 35.85 2.24
5134 9323 4.693566 AGTTTTTATGGCGTCGAAATCTCA 59.306 37.500 0.00 0.00 0.00 3.27
5176 9365 5.122869 TCTGAAACTAACTGATCTTGCATGC 59.877 40.000 11.82 11.82 0.00 4.06
5213 9402 2.948315 GAGGGTTCCTTGCATCTCATTC 59.052 50.000 0.00 0.00 31.76 2.67
5214 9403 2.357569 GGAGGGTTCCTTGCATCTCATT 60.358 50.000 0.00 0.00 40.58 2.57
5215 9404 1.213926 GGAGGGTTCCTTGCATCTCAT 59.786 52.381 0.00 0.00 40.58 2.90
5216 9405 0.620556 GGAGGGTTCCTTGCATCTCA 59.379 55.000 0.00 0.00 40.58 3.27
5217 9406 0.620556 TGGAGGGTTCCTTGCATCTC 59.379 55.000 0.00 0.00 44.36 2.75
5218 9407 1.302907 ATGGAGGGTTCCTTGCATCT 58.697 50.000 2.46 0.00 44.36 2.90
5265 9455 2.755655 AGTGACTATTCTGACAGACCCG 59.244 50.000 4.15 0.00 0.00 5.28
5568 9788 9.028284 ACAATGACCAGAAAATATCTTGTGAAT 57.972 29.630 0.00 0.00 34.35 2.57
5571 9791 7.596494 ACACAATGACCAGAAAATATCTTGTG 58.404 34.615 9.35 9.35 41.75 3.33
5573 9793 9.726232 CATACACAATGACCAGAAAATATCTTG 57.274 33.333 0.00 0.00 37.86 3.02
5617 9844 6.840705 ACCAAAACTATATGCTCCCATCAATT 59.159 34.615 0.00 0.00 32.85 2.32
5619 9846 5.593909 CACCAAAACTATATGCTCCCATCAA 59.406 40.000 0.00 0.00 32.85 2.57
5642 9869 1.745232 ACAGTTCGGCAGTTTTGTCA 58.255 45.000 0.00 0.00 0.00 3.58
5687 9914 2.263077 CCAGATTGAACTCTTCCGACG 58.737 52.381 0.00 0.00 0.00 5.12
5722 9951 6.019318 GCAAATAAGAATGACATTCCACATGC 60.019 38.462 21.89 20.22 40.13 4.06
5729 9958 9.415544 AGTTTCTTGCAAATAAGAATGACATTC 57.584 29.630 18.71 18.71 43.84 2.67
5737 9966 7.581213 TCCTTGAGTTTCTTGCAAATAAGAA 57.419 32.000 0.00 0.00 43.02 2.52
5772 10001 6.150140 GCATTACACTCCTCTGAAACTGAATT 59.850 38.462 0.00 0.00 0.00 2.17
5966 10197 2.159824 GCCTCTTTCAACTAGGCGTTTC 59.840 50.000 0.00 0.00 45.82 2.78
6066 10297 4.053295 CAAAAGTTTGATTCAGGCCACAG 58.947 43.478 5.01 0.00 40.55 3.66
6220 10456 7.872483 ACAAAACAAAACAGAGTTCTTCAATGT 59.128 29.630 0.00 0.00 0.00 2.71
6244 10495 8.812329 GCATAAAACAAACAGATACAAAACACA 58.188 29.630 0.00 0.00 0.00 3.72
6245 10496 9.030301 AGCATAAAACAAACAGATACAAAACAC 57.970 29.630 0.00 0.00 0.00 3.32
6246 10497 9.029243 CAGCATAAAACAAACAGATACAAAACA 57.971 29.630 0.00 0.00 0.00 2.83
6247 10498 9.030301 ACAGCATAAAACAAACAGATACAAAAC 57.970 29.630 0.00 0.00 0.00 2.43
6248 10499 9.593134 AACAGCATAAAACAAACAGATACAAAA 57.407 25.926 0.00 0.00 0.00 2.44
6250 10501 9.891828 CTAACAGCATAAAACAAACAGATACAA 57.108 29.630 0.00 0.00 0.00 2.41
6251 10502 8.020819 GCTAACAGCATAAAACAAACAGATACA 58.979 33.333 0.00 0.00 41.89 2.29
6252 10503 8.237267 AGCTAACAGCATAAAACAAACAGATAC 58.763 33.333 0.38 0.00 45.56 2.24
6253 10504 8.335532 AGCTAACAGCATAAAACAAACAGATA 57.664 30.769 0.38 0.00 45.56 1.98
6254 10505 7.219484 AGCTAACAGCATAAAACAAACAGAT 57.781 32.000 0.38 0.00 45.56 2.90
6255 10506 6.633500 AGCTAACAGCATAAAACAAACAGA 57.367 33.333 0.38 0.00 45.56 3.41
6256 10507 6.697019 ACAAGCTAACAGCATAAAACAAACAG 59.303 34.615 0.38 0.00 45.56 3.16
6295 10546 7.742151 TGTTGTGAATAAGACATTCTGATTCG 58.258 34.615 8.23 0.00 44.06 3.34
6442 10696 9.299963 CATTCACTACTTGATTCTTCAGAGTAG 57.700 37.037 15.71 15.71 42.15 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.