Multiple sequence alignment - TraesCS2A01G200700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G200700 chr2A 100.000 3353 0 0 1 3353 173519014 173515662 0.000000e+00 6192.0
1 TraesCS2A01G200700 chr2A 88.432 389 44 1 27 415 474131910 474131523 5.070000e-128 468.0
2 TraesCS2A01G200700 chr2D 92.188 2765 91 35 420 3102 162891702 162888981 0.000000e+00 3794.0
3 TraesCS2A01G200700 chr2B 94.830 1973 52 12 509 2448 222001953 221999998 0.000000e+00 3033.0
4 TraesCS2A01G200700 chr2B 85.820 677 46 17 2465 3102 221998068 221997403 0.000000e+00 673.0
5 TraesCS2A01G200700 chr2B 94.681 94 5 0 420 513 222004581 222004488 2.700000e-31 147.0
6 TraesCS2A01G200700 chr2B 97.059 34 1 0 3307 3340 39089649 39089616 1.300000e-04 58.4
7 TraesCS2A01G200700 chr2B 88.636 44 3 1 3307 3350 38090329 38090288 6.000000e-03 52.8
8 TraesCS2A01G200700 chr5A 90.130 385 35 3 25 408 475524029 475524411 6.460000e-137 497.0
9 TraesCS2A01G200700 chr5A 89.351 385 36 3 24 407 631210486 631210106 2.340000e-131 479.0
10 TraesCS2A01G200700 chr3A 89.610 385 39 1 24 408 63527019 63527402 3.890000e-134 488.0
11 TraesCS2A01G200700 chr3A 89.119 386 39 3 27 411 190026988 190026605 8.420000e-131 477.0
12 TraesCS2A01G200700 chr7A 89.323 384 39 2 25 407 218188195 218188577 6.510000e-132 481.0
13 TraesCS2A01G200700 chr7A 88.918 388 41 2 25 411 722081653 722081267 8.420000e-131 477.0
14 TraesCS2A01G200700 chr4A 89.529 382 36 4 27 407 40196303 40196681 6.510000e-132 481.0
15 TraesCS2A01G200700 chr6A 88.520 392 42 3 22 411 91890453 91890843 3.920000e-129 472.0
16 TraesCS2A01G200700 chr6B 100.000 33 0 0 3321 3353 716524950 716524918 1.000000e-05 62.1
17 TraesCS2A01G200700 chr3B 95.000 40 0 2 3306 3344 728581579 728581617 1.000000e-05 62.1
18 TraesCS2A01G200700 chr3D 94.872 39 1 1 3306 3344 549063776 549063813 3.610000e-05 60.2
19 TraesCS2A01G200700 chr3D 100.000 31 0 0 3321 3351 384006694 384006724 1.300000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G200700 chr2A 173515662 173519014 3352 True 6192.000000 6192 100.000 1 3353 1 chr2A.!!$R1 3352
1 TraesCS2A01G200700 chr2D 162888981 162891702 2721 True 3794.000000 3794 92.188 420 3102 1 chr2D.!!$R1 2682
2 TraesCS2A01G200700 chr2B 221997403 222004581 7178 True 1284.333333 3033 91.777 420 3102 3 chr2B.!!$R3 2682

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
350 351 0.031917 TTAGACCCTACCGCCATGGA 60.032 55.0 18.4 0.0 42.00 3.41 F
375 376 0.321298 GCGGTAGCAAAAGGGTCAGA 60.321 55.0 0.0 0.0 44.35 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2265 4840 0.614415 CTGTGAGCAGGGAGAGGTCT 60.614 60.000 0.00 0.0 39.01 3.85 R
2357 4932 6.472686 TTACGGGCCAAATAATAGCAAAAT 57.527 33.333 4.39 0.0 0.00 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.653890 CCGATGCGGCTAAATTTCATG 58.346 47.619 0.00 0.00 41.17 3.07
40 41 2.033299 CCGATGCGGCTAAATTTCATGT 59.967 45.455 0.00 0.00 41.17 3.21
41 42 3.489059 CCGATGCGGCTAAATTTCATGTT 60.489 43.478 0.00 0.00 41.17 2.71
42 43 4.104776 CGATGCGGCTAAATTTCATGTTT 58.895 39.130 0.00 0.00 0.00 2.83
43 44 4.562394 CGATGCGGCTAAATTTCATGTTTT 59.438 37.500 0.00 0.00 0.00 2.43
44 45 5.499017 CGATGCGGCTAAATTTCATGTTTTG 60.499 40.000 0.00 0.00 0.00 2.44
45 46 4.876125 TGCGGCTAAATTTCATGTTTTGA 58.124 34.783 0.00 0.00 0.00 2.69
46 47 4.683781 TGCGGCTAAATTTCATGTTTTGAC 59.316 37.500 0.00 0.00 32.84 3.18
47 48 4.091365 GCGGCTAAATTTCATGTTTTGACC 59.909 41.667 0.00 0.00 32.84 4.02
48 49 4.625311 CGGCTAAATTTCATGTTTTGACCC 59.375 41.667 0.00 0.00 32.84 4.46
49 50 5.566627 CGGCTAAATTTCATGTTTTGACCCT 60.567 40.000 0.00 0.00 32.84 4.34
50 51 6.230472 GGCTAAATTTCATGTTTTGACCCTT 58.770 36.000 0.00 0.00 32.84 3.95
51 52 6.710295 GGCTAAATTTCATGTTTTGACCCTTT 59.290 34.615 0.00 0.00 32.84 3.11
52 53 7.228507 GGCTAAATTTCATGTTTTGACCCTTTT 59.771 33.333 0.00 0.00 32.84 2.27
53 54 8.620416 GCTAAATTTCATGTTTTGACCCTTTTT 58.380 29.630 0.00 0.00 32.84 1.94
126 127 2.871096 TTTTTGCTACCGTCAGGGAT 57.129 45.000 0.00 0.00 43.47 3.85
127 128 2.396590 TTTTGCTACCGTCAGGGATC 57.603 50.000 0.00 0.00 43.47 3.36
128 129 1.271856 TTTGCTACCGTCAGGGATCA 58.728 50.000 0.00 0.00 43.47 2.92
129 130 1.496060 TTGCTACCGTCAGGGATCAT 58.504 50.000 0.00 0.00 43.47 2.45
130 131 0.752658 TGCTACCGTCAGGGATCATG 59.247 55.000 0.00 0.00 43.47 3.07
131 132 0.034059 GCTACCGTCAGGGATCATGG 59.966 60.000 0.00 0.00 43.47 3.66
132 133 0.034059 CTACCGTCAGGGATCATGGC 59.966 60.000 0.00 0.00 43.47 4.40
133 134 1.744320 TACCGTCAGGGATCATGGCG 61.744 60.000 15.03 15.03 45.03 5.69
134 135 2.280389 CGTCAGGGATCATGGCGG 60.280 66.667 14.38 0.00 41.88 6.13
135 136 2.911143 GTCAGGGATCATGGCGGT 59.089 61.111 0.00 0.00 0.00 5.68
136 137 1.744320 CGTCAGGGATCATGGCGGTA 61.744 60.000 14.38 0.00 41.88 4.02
137 138 0.034059 GTCAGGGATCATGGCGGTAG 59.966 60.000 0.00 0.00 0.00 3.18
138 139 1.121407 TCAGGGATCATGGCGGTAGG 61.121 60.000 0.00 0.00 0.00 3.18
139 140 1.843376 AGGGATCATGGCGGTAGGG 60.843 63.158 0.00 0.00 0.00 3.53
140 141 2.147387 GGGATCATGGCGGTAGGGT 61.147 63.158 0.00 0.00 0.00 4.34
141 142 0.834687 GGGATCATGGCGGTAGGGTA 60.835 60.000 0.00 0.00 0.00 3.69
142 143 1.276622 GGATCATGGCGGTAGGGTAT 58.723 55.000 0.00 0.00 0.00 2.73
143 144 2.463752 GGATCATGGCGGTAGGGTATA 58.536 52.381 0.00 0.00 0.00 1.47
144 145 2.835764 GGATCATGGCGGTAGGGTATAA 59.164 50.000 0.00 0.00 0.00 0.98
145 146 3.369157 GGATCATGGCGGTAGGGTATAAC 60.369 52.174 0.00 0.00 0.00 1.89
146 147 2.680251 TCATGGCGGTAGGGTATAACA 58.320 47.619 0.00 0.00 0.00 2.41
147 148 2.631062 TCATGGCGGTAGGGTATAACAG 59.369 50.000 0.00 0.00 0.00 3.16
148 149 0.754472 TGGCGGTAGGGTATAACAGC 59.246 55.000 0.00 0.00 36.28 4.40
149 150 0.034476 GGCGGTAGGGTATAACAGCC 59.966 60.000 1.03 1.03 46.91 4.85
155 156 3.601277 GGGTATAACAGCCTACCGC 57.399 57.895 0.00 0.00 41.95 5.68
156 157 0.034476 GGGTATAACAGCCTACCGCC 59.966 60.000 0.00 0.00 41.95 6.13
157 158 0.754472 GGTATAACAGCCTACCGCCA 59.246 55.000 0.00 0.00 38.78 5.69
158 159 1.139455 GGTATAACAGCCTACCGCCAA 59.861 52.381 0.00 0.00 38.78 4.52
159 160 2.480845 GTATAACAGCCTACCGCCAAG 58.519 52.381 0.00 0.00 38.78 3.61
172 173 3.006728 CCAAGGTCCCTGGCGGTA 61.007 66.667 0.00 0.00 0.00 4.02
173 174 2.584608 CAAGGTCCCTGGCGGTAG 59.415 66.667 0.00 0.00 0.00 3.18
174 175 2.687566 AAGGTCCCTGGCGGTAGG 60.688 66.667 0.00 0.00 37.59 3.18
180 181 4.028490 CCTGGCGGTAGGGTTGCA 62.028 66.667 0.00 0.00 34.06 4.08
181 182 2.272146 CTGGCGGTAGGGTTGCAT 59.728 61.111 0.00 0.00 0.00 3.96
182 183 2.045438 TGGCGGTAGGGTTGCATG 60.045 61.111 0.00 0.00 0.00 4.06
183 184 3.518068 GGCGGTAGGGTTGCATGC 61.518 66.667 11.82 11.82 0.00 4.06
184 185 3.518068 GCGGTAGGGTTGCATGCC 61.518 66.667 16.68 0.00 0.00 4.40
185 186 2.828549 CGGTAGGGTTGCATGCCC 60.829 66.667 16.68 16.67 46.43 5.36
190 191 3.749981 GGGTTGCATGCCCTATCG 58.250 61.111 16.68 0.00 42.81 2.92
191 192 2.555547 GGGTTGCATGCCCTATCGC 61.556 63.158 16.68 5.70 42.81 4.58
192 193 2.555547 GGTTGCATGCCCTATCGCC 61.556 63.158 16.68 3.02 0.00 5.54
193 194 1.823470 GTTGCATGCCCTATCGCCA 60.823 57.895 16.68 0.00 0.00 5.69
194 195 1.077140 TTGCATGCCCTATCGCCAA 60.077 52.632 16.68 0.00 0.00 4.52
195 196 0.682532 TTGCATGCCCTATCGCCAAA 60.683 50.000 16.68 0.00 0.00 3.28
196 197 0.682532 TGCATGCCCTATCGCCAAAA 60.683 50.000 16.68 0.00 0.00 2.44
197 198 0.459489 GCATGCCCTATCGCCAAAAA 59.541 50.000 6.36 0.00 0.00 1.94
198 199 1.802508 GCATGCCCTATCGCCAAAAAC 60.803 52.381 6.36 0.00 0.00 2.43
199 200 1.111277 ATGCCCTATCGCCAAAAACC 58.889 50.000 0.00 0.00 0.00 3.27
200 201 0.039035 TGCCCTATCGCCAAAAACCT 59.961 50.000 0.00 0.00 0.00 3.50
201 202 0.738975 GCCCTATCGCCAAAAACCTC 59.261 55.000 0.00 0.00 0.00 3.85
202 203 1.389555 CCCTATCGCCAAAAACCTCC 58.610 55.000 0.00 0.00 0.00 4.30
203 204 1.064685 CCCTATCGCCAAAAACCTCCT 60.065 52.381 0.00 0.00 0.00 3.69
204 205 2.171870 CCCTATCGCCAAAAACCTCCTA 59.828 50.000 0.00 0.00 0.00 2.94
205 206 3.371166 CCCTATCGCCAAAAACCTCCTAA 60.371 47.826 0.00 0.00 0.00 2.69
206 207 3.877508 CCTATCGCCAAAAACCTCCTAAG 59.122 47.826 0.00 0.00 0.00 2.18
207 208 2.943036 TCGCCAAAAACCTCCTAAGT 57.057 45.000 0.00 0.00 0.00 2.24
208 209 4.563140 ATCGCCAAAAACCTCCTAAGTA 57.437 40.909 0.00 0.00 0.00 2.24
209 210 4.563140 TCGCCAAAAACCTCCTAAGTAT 57.437 40.909 0.00 0.00 0.00 2.12
210 211 4.913784 TCGCCAAAAACCTCCTAAGTATT 58.086 39.130 0.00 0.00 0.00 1.89
211 212 6.052405 TCGCCAAAAACCTCCTAAGTATTA 57.948 37.500 0.00 0.00 0.00 0.98
212 213 6.474630 TCGCCAAAAACCTCCTAAGTATTAA 58.525 36.000 0.00 0.00 0.00 1.40
213 214 6.941436 TCGCCAAAAACCTCCTAAGTATTAAA 59.059 34.615 0.00 0.00 0.00 1.52
214 215 7.025365 CGCCAAAAACCTCCTAAGTATTAAAC 58.975 38.462 0.00 0.00 0.00 2.01
215 216 7.308710 CGCCAAAAACCTCCTAAGTATTAAACA 60.309 37.037 0.00 0.00 0.00 2.83
216 217 8.528643 GCCAAAAACCTCCTAAGTATTAAACAT 58.471 33.333 0.00 0.00 0.00 2.71
222 223 9.886132 AACCTCCTAAGTATTAAACATAGTGTG 57.114 33.333 0.00 0.00 29.17 3.82
223 224 9.043548 ACCTCCTAAGTATTAAACATAGTGTGT 57.956 33.333 0.00 0.00 44.84 3.72
224 225 9.314321 CCTCCTAAGTATTAAACATAGTGTGTG 57.686 37.037 0.00 0.00 41.14 3.82
225 226 8.712285 TCCTAAGTATTAAACATAGTGTGTGC 57.288 34.615 0.00 0.00 41.14 4.57
226 227 8.537016 TCCTAAGTATTAAACATAGTGTGTGCT 58.463 33.333 0.00 0.00 41.14 4.40
227 228 8.818057 CCTAAGTATTAAACATAGTGTGTGCTC 58.182 37.037 0.00 0.00 41.14 4.26
228 229 6.887376 AGTATTAAACATAGTGTGTGCTCG 57.113 37.500 0.00 0.00 41.14 5.03
229 230 6.395629 AGTATTAAACATAGTGTGTGCTCGT 58.604 36.000 0.00 0.00 41.14 4.18
230 231 4.983215 TTAAACATAGTGTGTGCTCGTG 57.017 40.909 0.00 0.00 41.14 4.35
231 232 1.148310 AACATAGTGTGTGCTCGTGC 58.852 50.000 1.71 1.71 41.14 5.34
232 233 0.670546 ACATAGTGTGTGCTCGTGCC 60.671 55.000 7.05 0.00 40.28 5.01
233 234 0.390340 CATAGTGTGTGCTCGTGCCT 60.390 55.000 7.05 0.00 38.71 4.75
234 235 1.135112 CATAGTGTGTGCTCGTGCCTA 60.135 52.381 7.05 1.17 38.71 3.93
235 236 0.242825 TAGTGTGTGCTCGTGCCTAC 59.757 55.000 7.05 6.63 38.71 3.18
236 237 2.027625 GTGTGTGCTCGTGCCTACC 61.028 63.158 7.05 0.00 38.71 3.18
237 238 2.809601 GTGTGCTCGTGCCTACCG 60.810 66.667 7.05 0.00 38.71 4.02
238 239 4.735132 TGTGCTCGTGCCTACCGC 62.735 66.667 7.05 0.00 38.71 5.68
241 242 4.752879 GCTCGTGCCTACCGCCAA 62.753 66.667 0.00 0.00 36.24 4.52
242 243 2.509336 CTCGTGCCTACCGCCAAG 60.509 66.667 0.00 0.00 36.24 3.61
243 244 4.752879 TCGTGCCTACCGCCAAGC 62.753 66.667 0.00 0.00 36.24 4.01
245 246 2.438434 GTGCCTACCGCCAAGCAT 60.438 61.111 0.00 0.00 37.60 3.79
246 247 2.124736 TGCCTACCGCCAAGCATC 60.125 61.111 0.00 0.00 36.24 3.91
247 248 2.190578 GCCTACCGCCAAGCATCT 59.809 61.111 0.00 0.00 0.00 2.90
248 249 1.452108 GCCTACCGCCAAGCATCTT 60.452 57.895 0.00 0.00 0.00 2.40
249 250 1.718757 GCCTACCGCCAAGCATCTTG 61.719 60.000 0.00 0.00 0.00 3.02
250 251 1.097547 CCTACCGCCAAGCATCTTGG 61.098 60.000 18.57 18.57 42.37 3.61
255 256 4.635769 CCAAGCATCTTGGCGGTA 57.364 55.556 12.09 0.00 39.27 4.02
256 257 2.397751 CCAAGCATCTTGGCGGTAG 58.602 57.895 12.09 0.00 39.27 3.18
257 258 1.097547 CCAAGCATCTTGGCGGTAGG 61.098 60.000 12.09 0.00 39.27 3.18
258 259 1.097547 CAAGCATCTTGGCGGTAGGG 61.098 60.000 0.00 0.00 39.27 3.53
259 260 1.562672 AAGCATCTTGGCGGTAGGGT 61.563 55.000 0.00 0.00 39.27 4.34
260 261 1.077716 GCATCTTGGCGGTAGGGTT 60.078 57.895 0.00 0.00 0.00 4.11
261 262 1.376609 GCATCTTGGCGGTAGGGTTG 61.377 60.000 0.00 0.00 0.00 3.77
262 263 0.035439 CATCTTGGCGGTAGGGTTGT 60.035 55.000 0.00 0.00 0.00 3.32
263 264 0.035439 ATCTTGGCGGTAGGGTTGTG 60.035 55.000 0.00 0.00 0.00 3.33
264 265 2.281900 TTGGCGGTAGGGTTGTGC 60.282 61.111 0.00 0.00 0.00 4.57
265 266 3.121406 TTGGCGGTAGGGTTGTGCA 62.121 57.895 0.00 0.00 0.00 4.57
266 267 2.746277 GGCGGTAGGGTTGTGCAG 60.746 66.667 0.00 0.00 0.00 4.41
267 268 2.746277 GCGGTAGGGTTGTGCAGG 60.746 66.667 0.00 0.00 0.00 4.85
268 269 2.746277 CGGTAGGGTTGTGCAGGC 60.746 66.667 0.00 0.00 0.00 4.85
269 270 2.757077 GGTAGGGTTGTGCAGGCT 59.243 61.111 0.00 0.00 0.00 4.58
270 271 1.895020 CGGTAGGGTTGTGCAGGCTA 61.895 60.000 0.00 0.00 0.00 3.93
271 272 0.392595 GGTAGGGTTGTGCAGGCTAC 60.393 60.000 0.00 0.00 0.00 3.58
272 273 0.392595 GTAGGGTTGTGCAGGCTACC 60.393 60.000 0.00 0.00 0.00 3.18
273 274 0.838554 TAGGGTTGTGCAGGCTACCA 60.839 55.000 9.51 0.00 32.20 3.25
274 275 1.971695 GGGTTGTGCAGGCTACCAC 60.972 63.158 9.51 7.91 32.20 4.16
275 276 1.971695 GGTTGTGCAGGCTACCACC 60.972 63.158 13.02 5.23 0.00 4.61
276 277 1.228124 GTTGTGCAGGCTACCACCA 60.228 57.895 13.02 2.05 0.00 4.17
277 278 0.821711 GTTGTGCAGGCTACCACCAA 60.822 55.000 13.02 6.63 0.00 3.67
278 279 0.821711 TTGTGCAGGCTACCACCAAC 60.822 55.000 13.02 0.00 0.00 3.77
279 280 1.971695 GTGCAGGCTACCACCAACC 60.972 63.158 6.28 0.00 0.00 3.77
280 281 2.361230 GCAGGCTACCACCAACCC 60.361 66.667 0.00 0.00 0.00 4.11
281 282 2.046314 CAGGCTACCACCAACCCG 60.046 66.667 0.00 0.00 0.00 5.28
282 283 2.528378 AGGCTACCACCAACCCGT 60.528 61.111 0.00 0.00 0.00 5.28
283 284 2.151388 AGGCTACCACCAACCCGTT 61.151 57.895 0.00 0.00 0.00 4.44
284 285 1.228337 GGCTACCACCAACCCGTTT 60.228 57.895 0.00 0.00 0.00 3.60
285 286 1.520600 GGCTACCACCAACCCGTTTG 61.521 60.000 0.00 0.00 34.63 2.93
297 298 4.405762 CGTTTGGCGGTAGCGATA 57.594 55.556 20.16 2.32 46.35 2.92
298 299 2.895039 CGTTTGGCGGTAGCGATAT 58.105 52.632 20.16 0.00 46.35 1.63
299 300 1.214367 CGTTTGGCGGTAGCGATATT 58.786 50.000 20.16 0.00 46.35 1.28
300 301 1.595794 CGTTTGGCGGTAGCGATATTT 59.404 47.619 20.16 0.00 46.35 1.40
301 302 2.031191 CGTTTGGCGGTAGCGATATTTT 59.969 45.455 20.16 0.00 46.35 1.82
302 303 3.614588 GTTTGGCGGTAGCGATATTTTC 58.385 45.455 20.16 0.00 46.35 2.29
303 304 2.902705 TGGCGGTAGCGATATTTTCT 57.097 45.000 20.16 0.00 46.35 2.52
304 305 4.325028 TTGGCGGTAGCGATATTTTCTA 57.675 40.909 20.16 0.00 46.35 2.10
305 306 3.645884 TGGCGGTAGCGATATTTTCTAC 58.354 45.455 20.16 0.00 46.35 2.59
306 307 2.991866 GGCGGTAGCGATATTTTCTACC 59.008 50.000 20.16 14.27 45.43 3.18
310 311 4.863491 GGTAGCGATATTTTCTACCGTCA 58.137 43.478 11.02 0.00 41.78 4.35
311 312 5.284079 GGTAGCGATATTTTCTACCGTCAA 58.716 41.667 11.02 0.00 41.78 3.18
312 313 5.750067 GGTAGCGATATTTTCTACCGTCAAA 59.250 40.000 11.02 0.00 41.78 2.69
313 314 5.968387 AGCGATATTTTCTACCGTCAAAG 57.032 39.130 0.00 0.00 0.00 2.77
314 315 5.416947 AGCGATATTTTCTACCGTCAAAGT 58.583 37.500 0.00 0.00 0.00 2.66
315 316 5.519206 AGCGATATTTTCTACCGTCAAAGTC 59.481 40.000 0.00 0.00 0.00 3.01
316 317 5.519206 GCGATATTTTCTACCGTCAAAGTCT 59.481 40.000 0.00 0.00 0.00 3.24
317 318 6.291690 GCGATATTTTCTACCGTCAAAGTCTC 60.292 42.308 0.00 0.00 0.00 3.36
318 319 6.973474 CGATATTTTCTACCGTCAAAGTCTCT 59.027 38.462 0.00 0.00 0.00 3.10
319 320 7.043986 CGATATTTTCTACCGTCAAAGTCTCTG 60.044 40.741 0.00 0.00 0.00 3.35
320 321 3.936372 TTCTACCGTCAAAGTCTCTGG 57.064 47.619 0.00 0.00 0.00 3.86
321 322 1.544691 TCTACCGTCAAAGTCTCTGGC 59.455 52.381 0.00 0.00 0.00 4.85
322 323 0.242825 TACCGTCAAAGTCTCTGGCG 59.757 55.000 0.00 0.00 41.48 5.69
323 324 3.862124 CGTCAAAGTCTCTGGCGG 58.138 61.111 0.00 0.00 38.23 6.13
324 325 1.006102 CGTCAAAGTCTCTGGCGGT 60.006 57.895 0.00 0.00 38.23 5.68
325 326 0.242825 CGTCAAAGTCTCTGGCGGTA 59.757 55.000 0.00 0.00 38.23 4.02
326 327 1.732732 CGTCAAAGTCTCTGGCGGTAG 60.733 57.143 0.00 0.00 38.23 3.18
327 328 0.895530 TCAAAGTCTCTGGCGGTAGG 59.104 55.000 0.00 0.00 0.00 3.18
328 329 0.741221 CAAAGTCTCTGGCGGTAGGC 60.741 60.000 0.00 0.00 44.11 3.93
329 330 0.905337 AAAGTCTCTGGCGGTAGGCT 60.905 55.000 0.00 0.00 44.18 4.58
330 331 1.608717 AAGTCTCTGGCGGTAGGCTG 61.609 60.000 0.00 0.00 44.18 4.85
331 332 2.037367 TCTCTGGCGGTAGGCTGT 59.963 61.111 0.00 0.00 44.18 4.40
332 333 1.609501 TCTCTGGCGGTAGGCTGTT 60.610 57.895 0.00 0.00 44.18 3.16
333 334 0.323999 TCTCTGGCGGTAGGCTGTTA 60.324 55.000 0.00 0.00 44.18 2.41
334 335 0.103208 CTCTGGCGGTAGGCTGTTAG 59.897 60.000 0.00 0.00 44.18 2.34
335 336 0.323999 TCTGGCGGTAGGCTGTTAGA 60.324 55.000 0.00 0.00 44.18 2.10
336 337 0.179108 CTGGCGGTAGGCTGTTAGAC 60.179 60.000 0.00 0.00 44.18 2.59
337 338 1.143401 GGCGGTAGGCTGTTAGACC 59.857 63.158 0.00 0.00 42.94 3.85
338 339 1.143401 GCGGTAGGCTGTTAGACCC 59.857 63.158 0.00 0.00 39.11 4.46
339 340 1.328430 GCGGTAGGCTGTTAGACCCT 61.328 60.000 0.00 0.00 39.11 4.34
340 341 2.025863 GCGGTAGGCTGTTAGACCCTA 61.026 57.143 0.00 0.00 39.11 3.53
341 342 1.680207 CGGTAGGCTGTTAGACCCTAC 59.320 57.143 0.00 7.39 46.60 3.18
343 344 1.680207 GTAGGCTGTTAGACCCTACCG 59.320 57.143 0.00 0.00 43.31 4.02
344 345 1.143401 GGCTGTTAGACCCTACCGC 59.857 63.158 0.00 0.00 0.00 5.68
345 346 1.143401 GCTGTTAGACCCTACCGCC 59.857 63.158 0.00 0.00 0.00 6.13
346 347 1.610554 GCTGTTAGACCCTACCGCCA 61.611 60.000 0.00 0.00 0.00 5.69
347 348 1.120530 CTGTTAGACCCTACCGCCAT 58.879 55.000 0.00 0.00 0.00 4.40
348 349 0.828022 TGTTAGACCCTACCGCCATG 59.172 55.000 0.00 0.00 0.00 3.66
349 350 0.106149 GTTAGACCCTACCGCCATGG 59.894 60.000 7.63 7.63 46.41 3.66
350 351 0.031917 TTAGACCCTACCGCCATGGA 60.032 55.000 18.40 0.00 42.00 3.41
351 352 0.757935 TAGACCCTACCGCCATGGAC 60.758 60.000 18.40 5.97 42.00 4.02
352 353 2.040606 ACCCTACCGCCATGGACT 59.959 61.111 18.40 0.00 42.00 3.85
353 354 2.029307 GACCCTACCGCCATGGACTC 62.029 65.000 18.40 0.00 42.00 3.36
354 355 1.762460 CCCTACCGCCATGGACTCT 60.762 63.158 18.40 0.00 42.00 3.24
355 356 1.443407 CCTACCGCCATGGACTCTG 59.557 63.158 18.40 1.49 42.00 3.35
356 357 1.443407 CTACCGCCATGGACTCTGG 59.557 63.158 18.40 10.73 42.00 3.86
361 362 3.628989 CCATGGACTCTGGCGGTA 58.371 61.111 5.56 0.00 0.00 4.02
362 363 1.443407 CCATGGACTCTGGCGGTAG 59.557 63.158 5.56 0.00 0.00 3.18
363 364 1.227380 CATGGACTCTGGCGGTAGC 60.227 63.158 0.00 0.00 44.18 3.58
373 374 4.390048 GCGGTAGCAAAAGGGTCA 57.610 55.556 0.00 0.00 44.35 4.02
374 375 2.171635 GCGGTAGCAAAAGGGTCAG 58.828 57.895 0.00 0.00 44.35 3.51
375 376 0.321298 GCGGTAGCAAAAGGGTCAGA 60.321 55.000 0.00 0.00 44.35 3.27
376 377 1.679032 GCGGTAGCAAAAGGGTCAGAT 60.679 52.381 0.00 0.00 44.35 2.90
377 378 2.280628 CGGTAGCAAAAGGGTCAGATC 58.719 52.381 0.00 0.00 0.00 2.75
378 379 2.093447 CGGTAGCAAAAGGGTCAGATCT 60.093 50.000 0.00 0.00 0.00 2.75
379 380 3.536570 GGTAGCAAAAGGGTCAGATCTC 58.463 50.000 0.00 0.00 0.00 2.75
380 381 2.393271 AGCAAAAGGGTCAGATCTCG 57.607 50.000 0.00 0.00 0.00 4.04
381 382 1.902508 AGCAAAAGGGTCAGATCTCGA 59.097 47.619 0.00 0.00 0.00 4.04
382 383 2.503356 AGCAAAAGGGTCAGATCTCGAT 59.497 45.455 0.00 0.00 0.00 3.59
383 384 3.054802 AGCAAAAGGGTCAGATCTCGATT 60.055 43.478 0.00 0.00 0.00 3.34
384 385 3.691609 GCAAAAGGGTCAGATCTCGATTT 59.308 43.478 0.00 0.00 0.00 2.17
385 386 4.156739 GCAAAAGGGTCAGATCTCGATTTT 59.843 41.667 0.00 0.00 0.00 1.82
386 387 5.335976 GCAAAAGGGTCAGATCTCGATTTTT 60.336 40.000 0.00 1.97 0.00 1.94
425 426 3.547746 TCTTAAAAATTAGCCGGCCGAT 58.452 40.909 30.73 17.92 0.00 4.18
566 3112 2.436646 CGTCCCACCAGCATCACC 60.437 66.667 0.00 0.00 0.00 4.02
654 3205 2.186826 CCCCCGTCAAATGATCGCC 61.187 63.158 0.00 0.00 0.00 5.54
779 3341 1.101331 CTTTGATTCCCTCTGCCTGC 58.899 55.000 0.00 0.00 0.00 4.85
831 3393 1.512734 GCAAATCGACAAGCGCAGG 60.513 57.895 11.47 2.84 40.61 4.85
910 3485 4.061596 GCAGTTATGAGTTATCCCTGAGC 58.938 47.826 0.00 0.00 0.00 4.26
946 3521 3.358076 CTGACCGACTCTTCCCGCC 62.358 68.421 0.00 0.00 0.00 6.13
947 3522 4.144703 GACCGACTCTTCCCGCCC 62.145 72.222 0.00 0.00 0.00 6.13
992 3567 4.096984 CACCTGAAATTATTGGCCTCTGTC 59.903 45.833 3.32 0.00 0.00 3.51
993 3568 4.018050 ACCTGAAATTATTGGCCTCTGTCT 60.018 41.667 3.32 0.00 0.00 3.41
994 3569 4.337555 CCTGAAATTATTGGCCTCTGTCTG 59.662 45.833 3.32 0.00 0.00 3.51
995 3570 4.922206 TGAAATTATTGGCCTCTGTCTGT 58.078 39.130 3.32 0.00 0.00 3.41
1055 3630 3.126879 CGCGATGAAGGCCAAGCA 61.127 61.111 5.01 0.00 33.83 3.91
1494 4069 1.527311 GTCAAGTTCTCGCACTTCACC 59.473 52.381 0.00 0.00 34.60 4.02
1731 4306 2.960688 GCCCTTCGAGTTCCAGCCT 61.961 63.158 0.00 0.00 0.00 4.58
1737 4312 1.982660 TCGAGTTCCAGCCTATCGAT 58.017 50.000 2.16 2.16 37.48 3.59
1851 4426 3.713615 CTACGACGTGACGGGCTCG 62.714 68.421 11.56 3.27 43.02 5.03
2079 4654 2.157305 TACGGAACATCGTGGCCGTT 62.157 55.000 21.69 0.00 45.62 4.44
2231 4806 2.663196 GAAGGGCTACACGCTGGT 59.337 61.111 0.00 0.00 41.51 4.00
2265 4840 1.374947 CCTCAAGCTCGGGTGGAAA 59.625 57.895 0.00 0.00 0.00 3.13
2349 4924 2.262211 GAGCAAAAACGCCATGATTCC 58.738 47.619 0.00 0.00 0.00 3.01
2452 5035 4.039730 TCTCTCTTCACTTCCTCAAGGTTG 59.960 45.833 0.00 0.00 33.37 3.77
2499 6998 1.410737 CCATCGTAGCCGTGTGTTCG 61.411 60.000 0.00 0.00 35.01 3.95
2513 7012 0.673985 TGTTCGGAGACTGTGACTGG 59.326 55.000 0.00 0.00 34.32 4.00
2569 7089 2.781973 GCGCCGTTGTGTTTAATACTCG 60.782 50.000 0.00 0.00 0.00 4.18
2633 7154 0.318441 TCGGTGAGCAGGACAAGAAG 59.682 55.000 0.00 0.00 0.00 2.85
2715 7236 2.800544 CAGTTGTCTCCTTGTGTAACGG 59.199 50.000 0.00 0.00 42.39 4.44
2750 7271 2.302662 CGATACGAGAGAATGACTGCG 58.697 52.381 0.00 0.00 0.00 5.18
2771 7292 2.817834 GCATGCTTGCCCGTACGA 60.818 61.111 18.76 0.00 43.38 3.43
2773 7294 1.447838 CATGCTTGCCCGTACGAGT 60.448 57.895 18.76 0.00 0.00 4.18
2813 7339 2.216898 GTTCATGGCATGTAGGAGAGC 58.783 52.381 25.62 5.12 0.00 4.09
2821 7347 1.453762 ATGTAGGAGAGCCGCGTACC 61.454 60.000 4.92 0.55 39.96 3.34
2835 7361 1.746470 CGTACCACAGGGGAATTTCC 58.254 55.000 6.91 6.91 41.15 3.13
2873 7400 3.812019 CGTGGTCGGACGCTAGCT 61.812 66.667 13.93 0.00 31.56 3.32
2879 7406 2.178521 CGGACGCTAGCTTCGTGT 59.821 61.111 16.68 9.62 40.59 4.49
2886 7413 0.804156 GCTAGCTTCGTGTCAGGCTC 60.804 60.000 7.70 0.00 36.40 4.70
2888 7415 1.203523 CTAGCTTCGTGTCAGGCTCTT 59.796 52.381 0.00 0.00 36.40 2.85
2890 7417 1.827969 AGCTTCGTGTCAGGCTCTTAT 59.172 47.619 0.00 0.00 0.00 1.73
2892 7419 2.675317 GCTTCGTGTCAGGCTCTTATGT 60.675 50.000 0.00 0.00 0.00 2.29
2893 7420 3.428999 GCTTCGTGTCAGGCTCTTATGTA 60.429 47.826 0.00 0.00 0.00 2.29
2894 7421 3.777465 TCGTGTCAGGCTCTTATGTAC 57.223 47.619 0.00 0.00 0.00 2.90
2895 7422 3.353557 TCGTGTCAGGCTCTTATGTACT 58.646 45.455 0.00 0.00 0.00 2.73
2896 7423 3.377485 TCGTGTCAGGCTCTTATGTACTC 59.623 47.826 0.00 0.00 0.00 2.59
2897 7424 3.378742 CGTGTCAGGCTCTTATGTACTCT 59.621 47.826 0.00 0.00 0.00 3.24
2898 7425 4.575236 CGTGTCAGGCTCTTATGTACTCTA 59.425 45.833 0.00 0.00 0.00 2.43
2899 7426 5.504337 CGTGTCAGGCTCTTATGTACTCTAC 60.504 48.000 0.00 0.00 0.00 2.59
2918 7445 2.299521 ACTACTGTAGGGATCACGAGC 58.700 52.381 18.38 0.00 0.00 5.03
2943 7471 1.416401 AGGAACGCAGGAAAGAACTGA 59.584 47.619 0.00 0.00 38.20 3.41
3044 7573 4.866327 ACCTACTGCTACTAGGTCTTCT 57.134 45.455 0.00 0.00 40.05 2.85
3045 7574 5.195848 ACCTACTGCTACTAGGTCTTCTT 57.804 43.478 0.00 0.00 40.05 2.52
3046 7575 5.195185 ACCTACTGCTACTAGGTCTTCTTC 58.805 45.833 0.00 0.00 40.05 2.87
3047 7576 4.273969 CCTACTGCTACTAGGTCTTCTTCG 59.726 50.000 0.00 0.00 0.00 3.79
3048 7577 3.688235 ACTGCTACTAGGTCTTCTTCGT 58.312 45.455 0.00 0.00 0.00 3.85
3049 7578 3.690628 ACTGCTACTAGGTCTTCTTCGTC 59.309 47.826 0.00 0.00 0.00 4.20
3062 7609 5.117897 GTCTTCTTCGTCAACAGAGTTGATC 59.882 44.000 14.77 8.51 0.00 2.92
3094 7641 7.347508 TCAGCTCGTTAGATTTAACAAGTTC 57.652 36.000 6.91 0.00 39.29 3.01
3129 7676 8.681486 ATAAACAATCTCATTCCATCGATTCA 57.319 30.769 0.00 0.00 0.00 2.57
3130 7677 7.395190 AAACAATCTCATTCCATCGATTCAA 57.605 32.000 0.00 0.00 0.00 2.69
3131 7678 6.369059 ACAATCTCATTCCATCGATTCAAC 57.631 37.500 0.00 0.00 0.00 3.18
3132 7679 5.297776 ACAATCTCATTCCATCGATTCAACC 59.702 40.000 0.00 0.00 0.00 3.77
3133 7680 4.760530 TCTCATTCCATCGATTCAACCT 57.239 40.909 0.00 0.00 0.00 3.50
3134 7681 5.869649 TCTCATTCCATCGATTCAACCTA 57.130 39.130 0.00 0.00 0.00 3.08
3135 7682 6.233905 TCTCATTCCATCGATTCAACCTAA 57.766 37.500 0.00 0.00 0.00 2.69
3136 7683 6.830912 TCTCATTCCATCGATTCAACCTAAT 58.169 36.000 0.00 0.00 0.00 1.73
3137 7684 6.931281 TCTCATTCCATCGATTCAACCTAATC 59.069 38.462 0.00 0.00 33.37 1.75
3138 7685 6.591001 TCATTCCATCGATTCAACCTAATCA 58.409 36.000 0.00 0.00 35.93 2.57
3139 7686 7.226441 TCATTCCATCGATTCAACCTAATCAT 58.774 34.615 0.00 0.00 35.93 2.45
3140 7687 7.388776 TCATTCCATCGATTCAACCTAATCATC 59.611 37.037 0.00 0.00 35.93 2.92
3141 7688 6.173427 TCCATCGATTCAACCTAATCATCA 57.827 37.500 0.00 0.00 35.93 3.07
3142 7689 6.591001 TCCATCGATTCAACCTAATCATCAA 58.409 36.000 0.00 0.00 35.93 2.57
3143 7690 7.226441 TCCATCGATTCAACCTAATCATCAAT 58.774 34.615 0.00 0.00 35.93 2.57
3144 7691 7.173735 TCCATCGATTCAACCTAATCATCAATG 59.826 37.037 0.00 0.00 35.93 2.82
3145 7692 7.040892 CCATCGATTCAACCTAATCATCAATGT 60.041 37.037 0.00 0.00 35.93 2.71
3146 7693 7.482654 TCGATTCAACCTAATCATCAATGTC 57.517 36.000 0.00 0.00 35.93 3.06
3147 7694 7.047271 TCGATTCAACCTAATCATCAATGTCA 58.953 34.615 0.00 0.00 35.93 3.58
3148 7695 7.716560 TCGATTCAACCTAATCATCAATGTCAT 59.283 33.333 0.00 0.00 35.93 3.06
3149 7696 8.992073 CGATTCAACCTAATCATCAATGTCATA 58.008 33.333 0.00 0.00 35.93 2.15
3151 7698 7.734924 TCAACCTAATCATCAATGTCATAGC 57.265 36.000 0.00 0.00 0.00 2.97
3152 7699 6.712095 TCAACCTAATCATCAATGTCATAGCC 59.288 38.462 0.00 0.00 0.00 3.93
3153 7700 6.191657 ACCTAATCATCAATGTCATAGCCA 57.808 37.500 0.00 0.00 0.00 4.75
3154 7701 6.787170 ACCTAATCATCAATGTCATAGCCAT 58.213 36.000 0.00 0.00 0.00 4.40
3155 7702 6.657966 ACCTAATCATCAATGTCATAGCCATG 59.342 38.462 0.00 0.00 0.00 3.66
3156 7703 6.882678 CCTAATCATCAATGTCATAGCCATGA 59.117 38.462 0.00 0.00 38.90 3.07
3163 7710 3.806941 TCATAGCCATGACAAGCCC 57.193 52.632 0.00 0.00 36.22 5.19
3164 7711 0.918258 TCATAGCCATGACAAGCCCA 59.082 50.000 0.00 0.00 36.22 5.36
3165 7712 1.134007 TCATAGCCATGACAAGCCCAG 60.134 52.381 0.00 0.00 36.22 4.45
3166 7713 0.184451 ATAGCCATGACAAGCCCAGG 59.816 55.000 0.00 0.00 0.00 4.45
3167 7714 1.925285 TAGCCATGACAAGCCCAGGG 61.925 60.000 0.00 0.00 38.41 4.45
3168 7715 2.765969 CCATGACAAGCCCAGGGT 59.234 61.111 7.55 0.00 31.41 4.34
3169 7716 1.379044 CCATGACAAGCCCAGGGTC 60.379 63.158 7.55 0.00 31.41 4.46
3170 7717 1.379916 CATGACAAGCCCAGGGTCA 59.620 57.895 7.55 2.76 44.73 4.02
3171 7718 0.251297 CATGACAAGCCCAGGGTCAA 60.251 55.000 7.55 0.00 43.93 3.18
3172 7719 0.706433 ATGACAAGCCCAGGGTCAAT 59.294 50.000 7.55 0.00 43.93 2.57
3173 7720 0.038166 TGACAAGCCCAGGGTCAATC 59.962 55.000 7.55 1.11 38.50 2.67
3174 7721 0.038166 GACAAGCCCAGGGTCAATCA 59.962 55.000 7.55 0.00 0.00 2.57
3175 7722 0.251341 ACAAGCCCAGGGTCAATCAC 60.251 55.000 7.55 0.00 0.00 3.06
3176 7723 0.038744 CAAGCCCAGGGTCAATCACT 59.961 55.000 7.55 0.00 0.00 3.41
3177 7724 1.281867 CAAGCCCAGGGTCAATCACTA 59.718 52.381 7.55 0.00 0.00 2.74
3178 7725 1.207791 AGCCCAGGGTCAATCACTAG 58.792 55.000 7.55 0.00 0.00 2.57
3179 7726 0.464554 GCCCAGGGTCAATCACTAGC 60.465 60.000 7.55 0.00 0.00 3.42
3180 7727 1.207791 CCCAGGGTCAATCACTAGCT 58.792 55.000 0.00 0.00 0.00 3.32
3181 7728 2.398588 CCCAGGGTCAATCACTAGCTA 58.601 52.381 0.00 0.00 0.00 3.32
3182 7729 2.975489 CCCAGGGTCAATCACTAGCTAT 59.025 50.000 0.00 0.00 0.00 2.97
3183 7730 4.160329 CCCAGGGTCAATCACTAGCTATA 58.840 47.826 0.00 0.00 0.00 1.31
3184 7731 4.221703 CCCAGGGTCAATCACTAGCTATAG 59.778 50.000 0.00 0.00 34.96 1.31
3185 7732 4.835615 CCAGGGTCAATCACTAGCTATAGT 59.164 45.833 0.84 0.00 43.24 2.12
3197 7744 6.636562 ACTAGCTATAGTGCTAAACATCGT 57.363 37.500 0.84 0.00 43.84 3.73
3198 7745 7.040473 ACTAGCTATAGTGCTAAACATCGTT 57.960 36.000 0.84 0.00 43.84 3.85
3199 7746 7.490000 ACTAGCTATAGTGCTAAACATCGTTT 58.510 34.615 0.84 0.00 43.84 3.60
3200 7747 6.830114 AGCTATAGTGCTAAACATCGTTTC 57.170 37.500 0.84 0.00 42.10 2.78
3201 7748 6.338146 AGCTATAGTGCTAAACATCGTTTCA 58.662 36.000 0.84 0.00 42.10 2.69
3202 7749 6.255887 AGCTATAGTGCTAAACATCGTTTCAC 59.744 38.462 0.84 0.11 42.10 3.18
3203 7750 6.255887 GCTATAGTGCTAAACATCGTTTCACT 59.744 38.462 14.53 14.53 37.17 3.41
3204 7751 7.434307 GCTATAGTGCTAAACATCGTTTCACTA 59.566 37.037 16.80 16.80 39.10 2.74
3205 7752 5.840940 AGTGCTAAACATCGTTTCACTAC 57.159 39.130 10.50 2.07 32.29 2.73
3206 7753 5.294356 AGTGCTAAACATCGTTTCACTACA 58.706 37.500 10.50 0.00 32.29 2.74
3207 7754 5.405571 AGTGCTAAACATCGTTTCACTACAG 59.594 40.000 10.50 0.00 32.29 2.74
3208 7755 5.176958 GTGCTAAACATCGTTTCACTACAGT 59.823 40.000 0.00 0.00 0.00 3.55
3209 7756 5.176774 TGCTAAACATCGTTTCACTACAGTG 59.823 40.000 2.84 2.84 46.91 3.66
3222 7769 4.976224 ACTACAGTGAACAAAACAACCC 57.024 40.909 0.00 0.00 0.00 4.11
3223 7770 4.337145 ACTACAGTGAACAAAACAACCCA 58.663 39.130 0.00 0.00 0.00 4.51
3224 7771 4.953579 ACTACAGTGAACAAAACAACCCAT 59.046 37.500 0.00 0.00 0.00 4.00
3225 7772 4.122143 ACAGTGAACAAAACAACCCATG 57.878 40.909 0.00 0.00 0.00 3.66
3226 7773 2.865551 CAGTGAACAAAACAACCCATGC 59.134 45.455 0.00 0.00 0.00 4.06
3227 7774 2.158971 AGTGAACAAAACAACCCATGCC 60.159 45.455 0.00 0.00 0.00 4.40
3228 7775 1.833630 TGAACAAAACAACCCATGCCA 59.166 42.857 0.00 0.00 0.00 4.92
3229 7776 2.437281 TGAACAAAACAACCCATGCCAT 59.563 40.909 0.00 0.00 0.00 4.40
3230 7777 2.547299 ACAAAACAACCCATGCCATG 57.453 45.000 0.00 0.00 0.00 3.66
3231 7778 2.045524 ACAAAACAACCCATGCCATGA 58.954 42.857 6.18 0.00 0.00 3.07
3232 7779 2.224257 ACAAAACAACCCATGCCATGAC 60.224 45.455 6.18 0.00 0.00 3.06
3233 7780 0.975887 AAACAACCCATGCCATGACC 59.024 50.000 6.18 0.00 0.00 4.02
3234 7781 0.904394 AACAACCCATGCCATGACCC 60.904 55.000 6.18 0.00 0.00 4.46
3235 7782 1.000739 CAACCCATGCCATGACCCT 59.999 57.895 6.18 0.00 0.00 4.34
3236 7783 1.000739 AACCCATGCCATGACCCTG 59.999 57.895 6.18 0.00 0.00 4.45
3237 7784 2.123597 CCCATGCCATGACCCTGG 60.124 66.667 6.18 0.00 39.45 4.45
3238 7785 2.685366 CCATGCCATGACCCTGGT 59.315 61.111 6.18 0.00 38.63 4.00
3239 7786 1.644437 CCCATGCCATGACCCTGGTA 61.644 60.000 6.18 0.00 38.63 3.25
3240 7787 0.479815 CCATGCCATGACCCTGGTAT 59.520 55.000 6.18 0.00 41.67 2.73
3241 7788 1.546323 CCATGCCATGACCCTGGTATC 60.546 57.143 6.18 0.00 39.31 2.24
3242 7789 0.773644 ATGCCATGACCCTGGTATCC 59.226 55.000 0.00 0.00 37.03 2.59
3243 7790 0.327480 TGCCATGACCCTGGTATCCT 60.327 55.000 0.00 0.00 38.63 3.24
3244 7791 0.846693 GCCATGACCCTGGTATCCTT 59.153 55.000 0.00 0.00 38.63 3.36
3245 7792 1.477558 GCCATGACCCTGGTATCCTTG 60.478 57.143 0.00 0.00 38.63 3.61
3246 7793 1.143684 CCATGACCCTGGTATCCTTGG 59.856 57.143 0.00 0.00 0.00 3.61
3247 7794 1.846439 CATGACCCTGGTATCCTTGGT 59.154 52.381 0.00 0.00 32.45 3.67
3248 7795 2.053747 TGACCCTGGTATCCTTGGTT 57.946 50.000 0.00 0.00 30.55 3.67
3249 7796 1.633432 TGACCCTGGTATCCTTGGTTG 59.367 52.381 0.00 0.00 30.55 3.77
3250 7797 0.999712 ACCCTGGTATCCTTGGTTGG 59.000 55.000 0.00 0.00 0.00 3.77
3251 7798 0.395724 CCCTGGTATCCTTGGTTGGC 60.396 60.000 0.00 0.00 0.00 4.52
3252 7799 0.625849 CCTGGTATCCTTGGTTGGCT 59.374 55.000 0.00 0.00 0.00 4.75
3253 7800 1.843851 CCTGGTATCCTTGGTTGGCTA 59.156 52.381 0.00 0.00 0.00 3.93
3254 7801 2.421529 CCTGGTATCCTTGGTTGGCTAC 60.422 54.545 0.00 0.00 0.00 3.58
3255 7802 1.208535 TGGTATCCTTGGTTGGCTACG 59.791 52.381 0.00 0.00 31.50 3.51
3256 7803 1.296727 GTATCCTTGGTTGGCTACGC 58.703 55.000 0.00 0.00 0.00 4.42
3266 7813 3.553363 GGCTACGCCCCCGGTAAT 61.553 66.667 0.00 0.00 44.06 1.89
3267 7814 2.030113 GCTACGCCCCCGGTAATC 59.970 66.667 0.00 0.00 39.22 1.75
3268 7815 2.799452 GCTACGCCCCCGGTAATCA 61.799 63.158 0.00 0.00 39.22 2.57
3269 7816 1.068585 CTACGCCCCCGGTAATCAC 59.931 63.158 0.00 0.00 39.22 3.06
3270 7817 1.678598 CTACGCCCCCGGTAATCACA 61.679 60.000 0.00 0.00 39.22 3.58
3271 7818 1.958902 TACGCCCCCGGTAATCACAC 61.959 60.000 0.00 0.00 39.22 3.82
3272 7819 2.672295 GCCCCCGGTAATCACACA 59.328 61.111 0.00 0.00 0.00 3.72
3273 7820 1.747745 GCCCCCGGTAATCACACAC 60.748 63.158 0.00 0.00 0.00 3.82
3274 7821 1.680487 CCCCCGGTAATCACACACA 59.320 57.895 0.00 0.00 0.00 3.72
3275 7822 0.675522 CCCCCGGTAATCACACACAC 60.676 60.000 0.00 0.00 0.00 3.82
3276 7823 0.035598 CCCCGGTAATCACACACACA 59.964 55.000 0.00 0.00 0.00 3.72
3277 7824 1.153353 CCCGGTAATCACACACACAC 58.847 55.000 0.00 0.00 0.00 3.82
3278 7825 1.541452 CCCGGTAATCACACACACACA 60.541 52.381 0.00 0.00 0.00 3.72
3279 7826 2.214347 CCGGTAATCACACACACACAA 58.786 47.619 0.00 0.00 0.00 3.33
3280 7827 2.614520 CCGGTAATCACACACACACAAA 59.385 45.455 0.00 0.00 0.00 2.83
3281 7828 3.065510 CCGGTAATCACACACACACAAAA 59.934 43.478 0.00 0.00 0.00 2.44
3282 7829 4.278858 CGGTAATCACACACACACAAAAG 58.721 43.478 0.00 0.00 0.00 2.27
3283 7830 4.034626 CGGTAATCACACACACACAAAAGA 59.965 41.667 0.00 0.00 0.00 2.52
3284 7831 5.447954 CGGTAATCACACACACACAAAAGAA 60.448 40.000 0.00 0.00 0.00 2.52
3285 7832 5.741982 GGTAATCACACACACACAAAAGAAC 59.258 40.000 0.00 0.00 0.00 3.01
3286 7833 5.643379 AATCACACACACACAAAAGAACT 57.357 34.783 0.00 0.00 0.00 3.01
3287 7834 4.418013 TCACACACACACAAAAGAACTG 57.582 40.909 0.00 0.00 0.00 3.16
3288 7835 2.916716 CACACACACACAAAAGAACTGC 59.083 45.455 0.00 0.00 0.00 4.40
3289 7836 2.176369 CACACACACAAAAGAACTGCG 58.824 47.619 0.00 0.00 0.00 5.18
3290 7837 1.810151 ACACACACAAAAGAACTGCGT 59.190 42.857 0.00 0.00 0.00 5.24
3291 7838 2.176369 CACACACAAAAGAACTGCGTG 58.824 47.619 0.00 0.00 33.92 5.34
3292 7839 1.810151 ACACACAAAAGAACTGCGTGT 59.190 42.857 0.00 0.00 41.30 4.49
3293 7840 3.004171 ACACACAAAAGAACTGCGTGTA 58.996 40.909 0.00 0.00 38.08 2.90
3294 7841 3.063452 ACACACAAAAGAACTGCGTGTAG 59.937 43.478 0.00 0.00 38.08 2.74
3295 7842 3.063452 CACACAAAAGAACTGCGTGTAGT 59.937 43.478 0.00 0.00 38.70 2.73
3296 7843 4.269123 CACACAAAAGAACTGCGTGTAGTA 59.731 41.667 0.00 0.00 38.70 1.82
3297 7844 4.871557 ACACAAAAGAACTGCGTGTAGTAA 59.128 37.500 0.00 0.00 38.95 2.24
3298 7845 5.006358 ACACAAAAGAACTGCGTGTAGTAAG 59.994 40.000 0.00 0.00 38.95 2.34
3299 7846 5.006358 CACAAAAGAACTGCGTGTAGTAAGT 59.994 40.000 0.00 0.00 0.00 2.24
3300 7847 5.006358 ACAAAAGAACTGCGTGTAGTAAGTG 59.994 40.000 0.00 0.00 0.00 3.16
3301 7848 3.299340 AGAACTGCGTGTAGTAAGTGG 57.701 47.619 0.00 0.00 0.00 4.00
3302 7849 2.889045 AGAACTGCGTGTAGTAAGTGGA 59.111 45.455 0.00 0.00 0.00 4.02
3303 7850 3.319972 AGAACTGCGTGTAGTAAGTGGAA 59.680 43.478 0.00 0.00 0.00 3.53
3304 7851 3.299340 ACTGCGTGTAGTAAGTGGAAG 57.701 47.619 0.00 0.00 0.00 3.46
3305 7852 1.993370 CTGCGTGTAGTAAGTGGAAGC 59.007 52.381 0.00 0.00 0.00 3.86
3306 7853 1.616865 TGCGTGTAGTAAGTGGAAGCT 59.383 47.619 0.00 0.00 0.00 3.74
3307 7854 2.036733 TGCGTGTAGTAAGTGGAAGCTT 59.963 45.455 0.00 0.00 0.00 3.74
3308 7855 3.256383 TGCGTGTAGTAAGTGGAAGCTTA 59.744 43.478 0.00 0.00 0.00 3.09
3309 7856 3.858238 GCGTGTAGTAAGTGGAAGCTTAG 59.142 47.826 0.00 0.00 32.30 2.18
3310 7857 4.421948 CGTGTAGTAAGTGGAAGCTTAGG 58.578 47.826 0.00 0.00 32.30 2.69
3311 7858 4.157289 CGTGTAGTAAGTGGAAGCTTAGGA 59.843 45.833 0.00 0.00 32.30 2.94
3312 7859 5.163540 CGTGTAGTAAGTGGAAGCTTAGGAT 60.164 44.000 0.00 0.00 32.30 3.24
3313 7860 6.043411 GTGTAGTAAGTGGAAGCTTAGGATG 58.957 44.000 0.00 0.00 32.30 3.51
3314 7861 5.720041 TGTAGTAAGTGGAAGCTTAGGATGT 59.280 40.000 0.00 0.00 32.30 3.06
3315 7862 5.091261 AGTAAGTGGAAGCTTAGGATGTG 57.909 43.478 0.00 0.00 32.30 3.21
3316 7863 4.532521 AGTAAGTGGAAGCTTAGGATGTGT 59.467 41.667 0.00 0.00 32.30 3.72
3317 7864 4.373156 AAGTGGAAGCTTAGGATGTGTT 57.627 40.909 0.00 0.00 0.00 3.32
3318 7865 4.373156 AGTGGAAGCTTAGGATGTGTTT 57.627 40.909 0.00 0.00 0.00 2.83
3319 7866 4.074970 AGTGGAAGCTTAGGATGTGTTTG 58.925 43.478 0.00 0.00 0.00 2.93
3320 7867 3.191371 GTGGAAGCTTAGGATGTGTTTGG 59.809 47.826 0.00 0.00 0.00 3.28
3321 7868 3.181434 TGGAAGCTTAGGATGTGTTTGGT 60.181 43.478 0.00 0.00 0.00 3.67
3322 7869 4.042311 TGGAAGCTTAGGATGTGTTTGGTA 59.958 41.667 0.00 0.00 0.00 3.25
3323 7870 4.636206 GGAAGCTTAGGATGTGTTTGGTAG 59.364 45.833 0.00 0.00 0.00 3.18
3324 7871 4.222124 AGCTTAGGATGTGTTTGGTAGG 57.778 45.455 0.00 0.00 0.00 3.18
3325 7872 3.054361 AGCTTAGGATGTGTTTGGTAGGG 60.054 47.826 0.00 0.00 0.00 3.53
3326 7873 3.308188 GCTTAGGATGTGTTTGGTAGGGT 60.308 47.826 0.00 0.00 0.00 4.34
3327 7874 2.879103 AGGATGTGTTTGGTAGGGTG 57.121 50.000 0.00 0.00 0.00 4.61
3328 7875 1.173913 GGATGTGTTTGGTAGGGTGC 58.826 55.000 0.00 0.00 0.00 5.01
3329 7876 1.546773 GGATGTGTTTGGTAGGGTGCA 60.547 52.381 0.00 0.00 0.00 4.57
3330 7877 2.446435 GATGTGTTTGGTAGGGTGCAT 58.554 47.619 0.00 0.00 0.00 3.96
3331 7878 1.614996 TGTGTTTGGTAGGGTGCATG 58.385 50.000 0.00 0.00 0.00 4.06
3332 7879 1.143889 TGTGTTTGGTAGGGTGCATGA 59.856 47.619 0.00 0.00 0.00 3.07
3333 7880 1.812571 GTGTTTGGTAGGGTGCATGAG 59.187 52.381 0.00 0.00 0.00 2.90
3334 7881 1.271871 TGTTTGGTAGGGTGCATGAGG 60.272 52.381 0.00 0.00 0.00 3.86
3335 7882 0.323360 TTTGGTAGGGTGCATGAGGC 60.323 55.000 0.00 0.00 45.13 4.70
3336 7883 1.207488 TTGGTAGGGTGCATGAGGCT 61.207 55.000 0.00 0.00 45.15 4.58
3337 7884 0.326143 TGGTAGGGTGCATGAGGCTA 60.326 55.000 0.00 0.00 45.15 3.93
3338 7885 0.837272 GGTAGGGTGCATGAGGCTAA 59.163 55.000 0.00 0.00 45.15 3.09
3339 7886 1.211949 GGTAGGGTGCATGAGGCTAAA 59.788 52.381 0.00 0.00 45.15 1.85
3340 7887 2.356741 GGTAGGGTGCATGAGGCTAAAA 60.357 50.000 0.00 0.00 45.15 1.52
3341 7888 2.134789 AGGGTGCATGAGGCTAAAAG 57.865 50.000 0.00 0.00 45.15 2.27
3342 7889 1.355720 AGGGTGCATGAGGCTAAAAGT 59.644 47.619 0.00 0.00 45.15 2.66
3343 7890 2.171003 GGGTGCATGAGGCTAAAAGTT 58.829 47.619 0.00 0.00 45.15 2.66
3344 7891 2.562738 GGGTGCATGAGGCTAAAAGTTT 59.437 45.455 0.00 0.00 45.15 2.66
3345 7892 3.367395 GGGTGCATGAGGCTAAAAGTTTC 60.367 47.826 0.00 0.00 45.15 2.78
3346 7893 3.367395 GGTGCATGAGGCTAAAAGTTTCC 60.367 47.826 0.00 0.00 45.15 3.13
3347 7894 3.507622 GTGCATGAGGCTAAAAGTTTCCT 59.492 43.478 0.00 0.00 45.15 3.36
3348 7895 4.700213 GTGCATGAGGCTAAAAGTTTCCTA 59.300 41.667 0.00 0.00 45.15 2.94
3349 7896 4.700213 TGCATGAGGCTAAAAGTTTCCTAC 59.300 41.667 0.00 0.00 45.15 3.18
3350 7897 4.096532 GCATGAGGCTAAAAGTTTCCTACC 59.903 45.833 0.00 0.00 40.25 3.18
3351 7898 4.296621 TGAGGCTAAAAGTTTCCTACCC 57.703 45.455 0.00 0.00 0.00 3.69
3352 7899 3.653836 TGAGGCTAAAAGTTTCCTACCCA 59.346 43.478 0.00 0.00 0.00 4.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.338818 ACATGAAATTTAGCCGCATCG 57.661 42.857 0.00 0.00 0.00 3.84
21 22 5.576384 TCAAAACATGAAATTTAGCCGCATC 59.424 36.000 0.00 0.00 34.30 3.91
22 23 5.348451 GTCAAAACATGAAATTTAGCCGCAT 59.652 36.000 0.00 0.00 40.50 4.73
23 24 4.683781 GTCAAAACATGAAATTTAGCCGCA 59.316 37.500 0.00 0.00 40.50 5.69
24 25 4.091365 GGTCAAAACATGAAATTTAGCCGC 59.909 41.667 0.00 0.00 40.50 6.53
25 26 4.625311 GGGTCAAAACATGAAATTTAGCCG 59.375 41.667 0.00 0.00 40.50 5.52
26 27 5.793817 AGGGTCAAAACATGAAATTTAGCC 58.206 37.500 0.00 2.28 40.50 3.93
27 28 7.728847 AAAGGGTCAAAACATGAAATTTAGC 57.271 32.000 0.00 0.00 40.50 3.09
107 108 2.039216 TGATCCCTGACGGTAGCAAAAA 59.961 45.455 0.00 0.00 0.00 1.94
108 109 1.626321 TGATCCCTGACGGTAGCAAAA 59.374 47.619 0.00 0.00 0.00 2.44
109 110 1.271856 TGATCCCTGACGGTAGCAAA 58.728 50.000 0.00 0.00 0.00 3.68
110 111 1.138859 CATGATCCCTGACGGTAGCAA 59.861 52.381 0.00 0.00 0.00 3.91
111 112 0.752658 CATGATCCCTGACGGTAGCA 59.247 55.000 0.00 0.00 0.00 3.49
112 113 0.034059 CCATGATCCCTGACGGTAGC 59.966 60.000 0.00 0.00 0.00 3.58
113 114 0.034059 GCCATGATCCCTGACGGTAG 59.966 60.000 0.00 0.00 0.00 3.18
114 115 1.744320 CGCCATGATCCCTGACGGTA 61.744 60.000 0.00 0.00 0.00 4.02
115 116 2.911143 GCCATGATCCCTGACGGT 59.089 61.111 0.00 0.00 0.00 4.83
116 117 2.280389 CGCCATGATCCCTGACGG 60.280 66.667 0.00 0.00 0.00 4.79
117 118 1.744320 TACCGCCATGATCCCTGACG 61.744 60.000 0.00 0.00 0.00 4.35
118 119 0.034059 CTACCGCCATGATCCCTGAC 59.966 60.000 0.00 0.00 0.00 3.51
119 120 1.121407 CCTACCGCCATGATCCCTGA 61.121 60.000 0.00 0.00 0.00 3.86
120 121 1.372683 CCTACCGCCATGATCCCTG 59.627 63.158 0.00 0.00 0.00 4.45
121 122 1.843376 CCCTACCGCCATGATCCCT 60.843 63.158 0.00 0.00 0.00 4.20
122 123 0.834687 TACCCTACCGCCATGATCCC 60.835 60.000 0.00 0.00 0.00 3.85
123 124 1.276622 ATACCCTACCGCCATGATCC 58.723 55.000 0.00 0.00 0.00 3.36
124 125 3.259876 TGTTATACCCTACCGCCATGATC 59.740 47.826 0.00 0.00 0.00 2.92
125 126 3.244582 TGTTATACCCTACCGCCATGAT 58.755 45.455 0.00 0.00 0.00 2.45
126 127 2.631062 CTGTTATACCCTACCGCCATGA 59.369 50.000 0.00 0.00 0.00 3.07
127 128 2.870435 GCTGTTATACCCTACCGCCATG 60.870 54.545 0.00 0.00 0.00 3.66
128 129 1.346722 GCTGTTATACCCTACCGCCAT 59.653 52.381 0.00 0.00 0.00 4.40
129 130 0.754472 GCTGTTATACCCTACCGCCA 59.246 55.000 0.00 0.00 0.00 5.69
130 131 0.034476 GGCTGTTATACCCTACCGCC 59.966 60.000 0.00 0.00 37.46 6.13
131 132 1.046204 AGGCTGTTATACCCTACCGC 58.954 55.000 0.00 0.00 0.00 5.68
132 133 3.930634 GTAGGCTGTTATACCCTACCG 57.069 52.381 0.00 0.00 43.31 4.02
134 135 2.029560 GCGGTAGGCTGTTATACCCTAC 60.030 54.545 0.00 7.39 46.60 3.18
135 136 2.242043 GCGGTAGGCTGTTATACCCTA 58.758 52.381 0.00 0.00 38.60 3.53
136 137 1.046204 GCGGTAGGCTGTTATACCCT 58.954 55.000 0.00 0.00 38.60 4.34
137 138 0.034476 GGCGGTAGGCTGTTATACCC 59.966 60.000 0.00 0.00 42.94 3.69
138 139 0.754472 TGGCGGTAGGCTGTTATACC 59.246 55.000 0.00 0.00 44.18 2.73
139 140 2.480845 CTTGGCGGTAGGCTGTTATAC 58.519 52.381 0.00 0.00 44.18 1.47
140 141 1.414919 CCTTGGCGGTAGGCTGTTATA 59.585 52.381 0.00 0.00 44.18 0.98
141 142 0.180406 CCTTGGCGGTAGGCTGTTAT 59.820 55.000 0.00 0.00 44.18 1.89
142 143 1.196104 ACCTTGGCGGTAGGCTGTTA 61.196 55.000 0.00 0.00 46.73 2.41
143 144 2.351276 CCTTGGCGGTAGGCTGTT 59.649 61.111 0.00 0.00 44.18 3.16
144 145 2.928396 ACCTTGGCGGTAGGCTGT 60.928 61.111 0.00 0.00 46.73 4.40
155 156 3.006728 TACCGCCAGGGACCTTGG 61.007 66.667 18.34 18.34 43.47 3.61
156 157 2.584608 CTACCGCCAGGGACCTTG 59.415 66.667 0.00 0.00 43.47 3.61
157 158 2.687566 CCTACCGCCAGGGACCTT 60.688 66.667 0.00 0.00 43.47 3.50
163 164 3.344137 ATGCAACCCTACCGCCAGG 62.344 63.158 0.00 0.00 45.13 4.45
164 165 2.114670 CATGCAACCCTACCGCCAG 61.115 63.158 0.00 0.00 0.00 4.85
165 166 2.045438 CATGCAACCCTACCGCCA 60.045 61.111 0.00 0.00 0.00 5.69
166 167 3.518068 GCATGCAACCCTACCGCC 61.518 66.667 14.21 0.00 0.00 6.13
167 168 3.518068 GGCATGCAACCCTACCGC 61.518 66.667 21.36 0.00 0.00 5.68
168 169 2.828549 GGGCATGCAACCCTACCG 60.829 66.667 21.36 0.00 44.68 4.02
174 175 2.555547 GGCGATAGGGCATGCAACC 61.556 63.158 21.36 12.66 41.77 3.77
175 176 3.034030 GGCGATAGGGCATGCAAC 58.966 61.111 21.36 11.90 41.77 4.17
182 183 0.738975 GAGGTTTTTGGCGATAGGGC 59.261 55.000 0.00 0.00 42.69 5.19
183 184 1.064685 AGGAGGTTTTTGGCGATAGGG 60.065 52.381 0.00 0.00 0.00 3.53
184 185 2.420058 AGGAGGTTTTTGGCGATAGG 57.580 50.000 0.00 0.00 0.00 2.57
185 186 4.514401 ACTTAGGAGGTTTTTGGCGATAG 58.486 43.478 0.00 0.00 0.00 2.08
186 187 4.563140 ACTTAGGAGGTTTTTGGCGATA 57.437 40.909 0.00 0.00 0.00 2.92
187 188 3.434940 ACTTAGGAGGTTTTTGGCGAT 57.565 42.857 0.00 0.00 0.00 4.58
188 189 2.943036 ACTTAGGAGGTTTTTGGCGA 57.057 45.000 0.00 0.00 0.00 5.54
189 190 6.746745 TTAATACTTAGGAGGTTTTTGGCG 57.253 37.500 0.00 0.00 0.00 5.69
190 191 7.888424 TGTTTAATACTTAGGAGGTTTTTGGC 58.112 34.615 0.00 0.00 0.00 4.52
196 197 9.886132 CACACTATGTTTAATACTTAGGAGGTT 57.114 33.333 0.00 0.00 38.29 3.50
197 198 9.043548 ACACACTATGTTTAATACTTAGGAGGT 57.956 33.333 0.00 0.00 38.98 3.85
198 199 9.314321 CACACACTATGTTTAATACTTAGGAGG 57.686 37.037 0.00 0.00 40.64 4.30
199 200 8.818057 GCACACACTATGTTTAATACTTAGGAG 58.182 37.037 0.00 0.00 40.64 3.69
200 201 8.537016 AGCACACACTATGTTTAATACTTAGGA 58.463 33.333 0.00 0.00 40.64 2.94
201 202 8.718102 AGCACACACTATGTTTAATACTTAGG 57.282 34.615 0.00 0.00 40.64 2.69
202 203 8.532341 CGAGCACACACTATGTTTAATACTTAG 58.468 37.037 0.00 0.00 40.64 2.18
203 204 8.030692 ACGAGCACACACTATGTTTAATACTTA 58.969 33.333 0.00 0.00 40.64 2.24
204 205 6.872020 ACGAGCACACACTATGTTTAATACTT 59.128 34.615 0.00 0.00 40.64 2.24
205 206 6.310467 CACGAGCACACACTATGTTTAATACT 59.690 38.462 0.00 0.00 40.64 2.12
206 207 6.466812 CACGAGCACACACTATGTTTAATAC 58.533 40.000 0.00 0.00 40.64 1.89
207 208 5.062934 GCACGAGCACACACTATGTTTAATA 59.937 40.000 0.00 0.00 40.64 0.98
208 209 4.142902 GCACGAGCACACACTATGTTTAAT 60.143 41.667 0.00 0.00 40.64 1.40
209 210 3.185594 GCACGAGCACACACTATGTTTAA 59.814 43.478 0.00 0.00 40.64 1.52
210 211 2.734606 GCACGAGCACACACTATGTTTA 59.265 45.455 0.00 0.00 40.64 2.01
211 212 1.531149 GCACGAGCACACACTATGTTT 59.469 47.619 0.00 0.00 40.64 2.83
212 213 1.148310 GCACGAGCACACACTATGTT 58.852 50.000 0.00 0.00 40.64 2.71
213 214 0.670546 GGCACGAGCACACACTATGT 60.671 55.000 7.26 0.00 44.81 2.29
214 215 0.390340 AGGCACGAGCACACACTATG 60.390 55.000 7.26 0.00 44.61 2.23
215 216 1.135083 GTAGGCACGAGCACACACTAT 60.135 52.381 7.26 0.00 44.61 2.12
216 217 0.242825 GTAGGCACGAGCACACACTA 59.757 55.000 7.26 0.00 44.61 2.74
217 218 1.006102 GTAGGCACGAGCACACACT 60.006 57.895 7.26 0.00 44.61 3.55
218 219 2.027625 GGTAGGCACGAGCACACAC 61.028 63.158 7.26 0.00 44.61 3.82
219 220 2.342279 GGTAGGCACGAGCACACA 59.658 61.111 7.26 0.00 44.61 3.72
220 221 2.809601 CGGTAGGCACGAGCACAC 60.810 66.667 7.26 3.37 44.61 3.82
221 222 4.735132 GCGGTAGGCACGAGCACA 62.735 66.667 7.26 0.00 44.61 4.57
230 231 1.452108 AAGATGCTTGGCGGTAGGC 60.452 57.895 0.00 0.00 44.11 3.93
231 232 1.097547 CCAAGATGCTTGGCGGTAGG 61.098 60.000 12.75 0.00 32.18 3.18
232 233 2.397751 CCAAGATGCTTGGCGGTAG 58.602 57.895 12.75 0.00 32.18 3.18
233 234 4.635769 CCAAGATGCTTGGCGGTA 57.364 55.556 12.75 0.00 32.18 4.02
238 239 1.097547 CCTACCGCCAAGATGCTTGG 61.098 60.000 19.28 19.28 42.37 3.61
239 240 1.097547 CCCTACCGCCAAGATGCTTG 61.098 60.000 0.00 0.00 0.00 4.01
240 241 1.224592 CCCTACCGCCAAGATGCTT 59.775 57.895 0.00 0.00 0.00 3.91
241 242 1.562672 AACCCTACCGCCAAGATGCT 61.563 55.000 0.00 0.00 0.00 3.79
242 243 1.077716 AACCCTACCGCCAAGATGC 60.078 57.895 0.00 0.00 0.00 3.91
243 244 0.035439 ACAACCCTACCGCCAAGATG 60.035 55.000 0.00 0.00 0.00 2.90
244 245 0.035439 CACAACCCTACCGCCAAGAT 60.035 55.000 0.00 0.00 0.00 2.40
245 246 1.373435 CACAACCCTACCGCCAAGA 59.627 57.895 0.00 0.00 0.00 3.02
246 247 2.332654 GCACAACCCTACCGCCAAG 61.333 63.158 0.00 0.00 0.00 3.61
247 248 2.281900 GCACAACCCTACCGCCAA 60.282 61.111 0.00 0.00 0.00 4.52
248 249 3.545124 CTGCACAACCCTACCGCCA 62.545 63.158 0.00 0.00 0.00 5.69
249 250 2.746277 CTGCACAACCCTACCGCC 60.746 66.667 0.00 0.00 0.00 6.13
250 251 2.746277 CCTGCACAACCCTACCGC 60.746 66.667 0.00 0.00 0.00 5.68
251 252 1.895020 TAGCCTGCACAACCCTACCG 61.895 60.000 0.00 0.00 0.00 4.02
252 253 0.392595 GTAGCCTGCACAACCCTACC 60.393 60.000 0.00 0.00 0.00 3.18
253 254 0.392595 GGTAGCCTGCACAACCCTAC 60.393 60.000 0.00 0.00 0.00 3.18
254 255 0.838554 TGGTAGCCTGCACAACCCTA 60.839 55.000 6.05 0.00 0.00 3.53
255 256 2.153401 TGGTAGCCTGCACAACCCT 61.153 57.895 6.05 0.00 0.00 4.34
256 257 1.971695 GTGGTAGCCTGCACAACCC 60.972 63.158 6.05 0.00 0.00 4.11
257 258 1.971695 GGTGGTAGCCTGCACAACC 60.972 63.158 0.00 3.56 32.88 3.77
258 259 0.821711 TTGGTGGTAGCCTGCACAAC 60.822 55.000 0.00 0.00 0.00 3.32
259 260 0.821711 GTTGGTGGTAGCCTGCACAA 60.822 55.000 0.00 0.00 0.00 3.33
260 261 1.228124 GTTGGTGGTAGCCTGCACA 60.228 57.895 0.00 0.00 0.00 4.57
261 262 1.971695 GGTTGGTGGTAGCCTGCAC 60.972 63.158 0.00 0.00 0.00 4.57
262 263 2.434331 GGTTGGTGGTAGCCTGCA 59.566 61.111 0.00 0.00 0.00 4.41
263 264 2.361230 GGGTTGGTGGTAGCCTGC 60.361 66.667 0.00 0.00 0.00 4.85
264 265 2.046314 CGGGTTGGTGGTAGCCTG 60.046 66.667 0.00 0.00 0.00 4.85
265 266 1.712000 AAACGGGTTGGTGGTAGCCT 61.712 55.000 0.00 0.00 0.00 4.58
266 267 1.228337 AAACGGGTTGGTGGTAGCC 60.228 57.895 0.00 0.00 0.00 3.93
267 268 1.953772 CAAACGGGTTGGTGGTAGC 59.046 57.895 0.00 0.00 33.18 3.58
280 281 1.214367 AATATCGCTACCGCCAAACG 58.786 50.000 0.00 0.00 43.15 3.60
281 282 3.311596 AGAAAATATCGCTACCGCCAAAC 59.688 43.478 0.00 0.00 0.00 2.93
282 283 3.537580 AGAAAATATCGCTACCGCCAAA 58.462 40.909 0.00 0.00 0.00 3.28
283 284 3.188159 AGAAAATATCGCTACCGCCAA 57.812 42.857 0.00 0.00 0.00 4.52
284 285 2.902705 AGAAAATATCGCTACCGCCA 57.097 45.000 0.00 0.00 0.00 5.69
285 286 2.991866 GGTAGAAAATATCGCTACCGCC 59.008 50.000 10.89 0.00 43.16 6.13
288 289 4.863491 TGACGGTAGAAAATATCGCTACC 58.137 43.478 14.24 14.24 46.76 3.18
289 290 6.474751 ACTTTGACGGTAGAAAATATCGCTAC 59.525 38.462 0.00 0.00 35.05 3.58
290 291 6.567050 ACTTTGACGGTAGAAAATATCGCTA 58.433 36.000 0.00 0.00 0.00 4.26
291 292 5.416947 ACTTTGACGGTAGAAAATATCGCT 58.583 37.500 0.00 0.00 0.00 4.93
292 293 5.519206 AGACTTTGACGGTAGAAAATATCGC 59.481 40.000 0.00 0.00 0.00 4.58
293 294 6.973474 AGAGACTTTGACGGTAGAAAATATCG 59.027 38.462 0.00 0.00 0.00 2.92
294 295 7.222999 CCAGAGACTTTGACGGTAGAAAATATC 59.777 40.741 0.00 0.00 0.00 1.63
295 296 7.042335 CCAGAGACTTTGACGGTAGAAAATAT 58.958 38.462 0.00 0.00 0.00 1.28
296 297 6.395629 CCAGAGACTTTGACGGTAGAAAATA 58.604 40.000 0.00 0.00 0.00 1.40
297 298 5.238583 CCAGAGACTTTGACGGTAGAAAAT 58.761 41.667 0.00 0.00 0.00 1.82
298 299 4.628074 CCAGAGACTTTGACGGTAGAAAA 58.372 43.478 0.00 0.00 0.00 2.29
299 300 3.554337 GCCAGAGACTTTGACGGTAGAAA 60.554 47.826 0.00 0.00 0.00 2.52
300 301 2.029290 GCCAGAGACTTTGACGGTAGAA 60.029 50.000 0.00 0.00 0.00 2.10
301 302 1.544691 GCCAGAGACTTTGACGGTAGA 59.455 52.381 0.00 0.00 0.00 2.59
302 303 1.732732 CGCCAGAGACTTTGACGGTAG 60.733 57.143 0.00 0.00 0.00 3.18
303 304 0.242825 CGCCAGAGACTTTGACGGTA 59.757 55.000 0.00 0.00 0.00 4.02
304 305 1.006102 CGCCAGAGACTTTGACGGT 60.006 57.895 0.00 0.00 0.00 4.83
305 306 1.738099 CCGCCAGAGACTTTGACGG 60.738 63.158 6.35 6.35 0.00 4.79
306 307 0.242825 TACCGCCAGAGACTTTGACG 59.757 55.000 0.00 0.00 0.00 4.35
307 308 1.404315 CCTACCGCCAGAGACTTTGAC 60.404 57.143 0.00 0.00 0.00 3.18
308 309 0.895530 CCTACCGCCAGAGACTTTGA 59.104 55.000 0.00 0.00 0.00 2.69
309 310 0.741221 GCCTACCGCCAGAGACTTTG 60.741 60.000 0.00 0.00 0.00 2.77
310 311 0.905337 AGCCTACCGCCAGAGACTTT 60.905 55.000 0.00 0.00 38.78 2.66
311 312 1.305381 AGCCTACCGCCAGAGACTT 60.305 57.895 0.00 0.00 38.78 3.01
312 313 2.055042 CAGCCTACCGCCAGAGACT 61.055 63.158 0.00 0.00 38.78 3.24
313 314 1.889530 AACAGCCTACCGCCAGAGAC 61.890 60.000 0.00 0.00 38.78 3.36
314 315 0.323999 TAACAGCCTACCGCCAGAGA 60.324 55.000 0.00 0.00 38.78 3.10
315 316 0.103208 CTAACAGCCTACCGCCAGAG 59.897 60.000 0.00 0.00 38.78 3.35
316 317 0.323999 TCTAACAGCCTACCGCCAGA 60.324 55.000 0.00 0.00 38.78 3.86
317 318 0.179108 GTCTAACAGCCTACCGCCAG 60.179 60.000 0.00 0.00 38.78 4.85
318 319 1.610554 GGTCTAACAGCCTACCGCCA 61.611 60.000 0.00 0.00 38.78 5.69
319 320 1.143401 GGTCTAACAGCCTACCGCC 59.857 63.158 0.00 0.00 38.78 6.13
320 321 1.143401 GGGTCTAACAGCCTACCGC 59.857 63.158 0.00 0.00 39.90 5.68
326 327 1.143401 GCGGTAGGGTCTAACAGCC 59.857 63.158 0.00 0.00 43.93 4.85
327 328 1.143401 GGCGGTAGGGTCTAACAGC 59.857 63.158 0.00 0.00 36.28 4.40
328 329 1.120530 ATGGCGGTAGGGTCTAACAG 58.879 55.000 0.00 0.00 0.00 3.16
329 330 0.828022 CATGGCGGTAGGGTCTAACA 59.172 55.000 0.00 0.00 0.00 2.41
330 331 0.106149 CCATGGCGGTAGGGTCTAAC 59.894 60.000 0.00 0.00 0.00 2.34
331 332 0.031917 TCCATGGCGGTAGGGTCTAA 60.032 55.000 6.96 0.00 35.57 2.10
332 333 0.757935 GTCCATGGCGGTAGGGTCTA 60.758 60.000 6.96 0.00 35.57 2.59
333 334 2.064581 GTCCATGGCGGTAGGGTCT 61.065 63.158 6.96 0.00 35.57 3.85
334 335 2.029307 GAGTCCATGGCGGTAGGGTC 62.029 65.000 6.96 0.00 35.57 4.46
335 336 2.040606 AGTCCATGGCGGTAGGGT 59.959 61.111 6.96 0.00 35.57 4.34
336 337 1.762460 AGAGTCCATGGCGGTAGGG 60.762 63.158 6.96 0.00 35.57 3.53
337 338 1.443407 CAGAGTCCATGGCGGTAGG 59.557 63.158 6.96 0.00 35.57 3.18
338 339 1.443407 CCAGAGTCCATGGCGGTAG 59.557 63.158 6.96 0.00 35.57 3.18
339 340 3.628989 CCAGAGTCCATGGCGGTA 58.371 61.111 6.96 0.00 35.57 4.02
344 345 1.443407 CTACCGCCAGAGTCCATGG 59.557 63.158 4.97 4.97 41.04 3.66
345 346 1.227380 GCTACCGCCAGAGTCCATG 60.227 63.158 0.00 0.00 0.00 3.66
346 347 1.264749 TTGCTACCGCCAGAGTCCAT 61.265 55.000 0.00 0.00 34.43 3.41
347 348 1.476845 TTTGCTACCGCCAGAGTCCA 61.477 55.000 0.00 0.00 34.43 4.02
348 349 0.321298 TTTTGCTACCGCCAGAGTCC 60.321 55.000 0.00 0.00 34.43 3.85
349 350 1.079503 CTTTTGCTACCGCCAGAGTC 58.920 55.000 0.00 0.00 34.43 3.36
350 351 0.321653 CCTTTTGCTACCGCCAGAGT 60.322 55.000 0.00 0.00 34.43 3.24
351 352 1.026718 CCCTTTTGCTACCGCCAGAG 61.027 60.000 0.00 0.00 34.43 3.35
352 353 1.002624 CCCTTTTGCTACCGCCAGA 60.003 57.895 0.00 0.00 34.43 3.86
353 354 1.303317 ACCCTTTTGCTACCGCCAG 60.303 57.895 0.00 0.00 34.43 4.85
354 355 1.302993 GACCCTTTTGCTACCGCCA 60.303 57.895 0.00 0.00 34.43 5.69
355 356 1.302993 TGACCCTTTTGCTACCGCC 60.303 57.895 0.00 0.00 34.43 6.13
356 357 0.321298 TCTGACCCTTTTGCTACCGC 60.321 55.000 0.00 0.00 0.00 5.68
357 358 2.093447 AGATCTGACCCTTTTGCTACCG 60.093 50.000 0.00 0.00 0.00 4.02
358 359 3.536570 GAGATCTGACCCTTTTGCTACC 58.463 50.000 0.00 0.00 0.00 3.18
359 360 3.119101 TCGAGATCTGACCCTTTTGCTAC 60.119 47.826 0.00 0.00 0.00 3.58
360 361 3.096852 TCGAGATCTGACCCTTTTGCTA 58.903 45.455 0.00 0.00 0.00 3.49
361 362 1.902508 TCGAGATCTGACCCTTTTGCT 59.097 47.619 0.00 0.00 0.00 3.91
362 363 2.386661 TCGAGATCTGACCCTTTTGC 57.613 50.000 0.00 0.00 0.00 3.68
363 364 5.886960 AAAATCGAGATCTGACCCTTTTG 57.113 39.130 0.00 0.00 0.00 2.44
394 395 9.333724 CCGGCTAATTTTTAAGATTAGACCTTA 57.666 33.333 16.30 0.00 40.47 2.69
395 396 7.201794 GCCGGCTAATTTTTAAGATTAGACCTT 60.202 37.037 22.15 0.00 40.47 3.50
396 397 6.262496 GCCGGCTAATTTTTAAGATTAGACCT 59.738 38.462 22.15 0.00 40.47 3.85
397 398 6.436261 GCCGGCTAATTTTTAAGATTAGACC 58.564 40.000 22.15 14.65 40.47 3.85
398 399 6.436261 GGCCGGCTAATTTTTAAGATTAGAC 58.564 40.000 28.56 13.28 40.28 2.59
399 400 5.237779 CGGCCGGCTAATTTTTAAGATTAGA 59.762 40.000 28.56 0.00 38.69 2.10
400 401 5.237779 TCGGCCGGCTAATTTTTAAGATTAG 59.762 40.000 28.56 9.92 39.16 1.73
401 402 5.124645 TCGGCCGGCTAATTTTTAAGATTA 58.875 37.500 28.56 0.00 0.00 1.75
402 403 3.949113 TCGGCCGGCTAATTTTTAAGATT 59.051 39.130 28.56 0.00 0.00 2.40
403 404 3.547746 TCGGCCGGCTAATTTTTAAGAT 58.452 40.909 28.56 0.00 0.00 2.40
404 405 2.988570 TCGGCCGGCTAATTTTTAAGA 58.011 42.857 28.56 7.41 0.00 2.10
405 406 3.628017 CATCGGCCGGCTAATTTTTAAG 58.372 45.455 28.56 3.38 0.00 1.85
406 407 2.223618 GCATCGGCCGGCTAATTTTTAA 60.224 45.455 28.56 0.12 0.00 1.52
407 408 1.335496 GCATCGGCCGGCTAATTTTTA 59.665 47.619 28.56 0.77 0.00 1.52
408 409 0.102300 GCATCGGCCGGCTAATTTTT 59.898 50.000 28.56 1.33 0.00 1.94
409 410 0.751643 AGCATCGGCCGGCTAATTTT 60.752 50.000 28.56 5.74 42.56 1.82
410 411 1.152963 AGCATCGGCCGGCTAATTT 60.153 52.632 28.56 5.17 42.56 1.82
411 412 1.893808 CAGCATCGGCCGGCTAATT 60.894 57.895 28.56 6.11 42.56 1.40
412 413 2.281070 CAGCATCGGCCGGCTAAT 60.281 61.111 28.56 17.20 42.56 1.73
641 3192 2.834618 GCCGGGGCGATCATTTGAC 61.835 63.158 2.18 0.00 0.00 3.18
654 3205 4.374584 TGGGTTGATTGGGCCGGG 62.375 66.667 2.18 0.00 0.00 5.73
808 3370 1.508088 GCTTGTCGATTTGCTGGGG 59.492 57.895 0.00 0.00 0.00 4.96
865 3427 0.811616 GACTTGGTAGAGCATGGCGG 60.812 60.000 0.00 0.00 0.00 6.13
992 3567 0.531532 GCCCTGGATCATCACGACAG 60.532 60.000 0.00 0.00 0.00 3.51
993 3568 1.522092 GCCCTGGATCATCACGACA 59.478 57.895 0.00 0.00 0.00 4.35
994 3569 1.592669 CGCCCTGGATCATCACGAC 60.593 63.158 0.00 0.00 0.00 4.34
995 3570 2.016393 GACGCCCTGGATCATCACGA 62.016 60.000 0.00 0.00 0.00 4.35
1265 3840 1.908340 GACCTCCTGCAGCATGTCCT 61.908 60.000 8.66 0.00 39.31 3.85
1737 4312 3.000819 ACGTGCCCGATCTTCCCA 61.001 61.111 0.00 0.00 37.88 4.37
1939 4514 4.323477 CTCCACGAACCGGCCCAA 62.323 66.667 0.00 0.00 0.00 4.12
2265 4840 0.614415 CTGTGAGCAGGGAGAGGTCT 60.614 60.000 0.00 0.00 39.01 3.85
2349 4924 8.553696 GGCCAAATAATAGCAAAATTTGATCAG 58.446 33.333 10.26 0.00 41.14 2.90
2357 4932 6.472686 TTACGGGCCAAATAATAGCAAAAT 57.527 33.333 4.39 0.00 0.00 1.82
2477 6974 1.878522 CACACGGCTACGATGGAGC 60.879 63.158 0.00 0.00 44.60 4.70
2478 6975 0.108804 AACACACGGCTACGATGGAG 60.109 55.000 0.00 0.00 44.60 3.86
2499 6998 1.605712 CGAAACCCAGTCACAGTCTCC 60.606 57.143 0.00 0.00 0.00 3.71
2513 7012 4.679639 GCCAAAATTTCCCTATCCGAAACC 60.680 45.833 0.00 0.00 32.30 3.27
2569 7089 8.301002 GGATGATGTCTACTCTAATCTAACCAC 58.699 40.741 0.00 0.00 0.00 4.16
2617 7138 2.560542 TCTCTCTTCTTGTCCTGCTCAC 59.439 50.000 0.00 0.00 0.00 3.51
2633 7154 0.099082 CGACGGGTAAGCTGTCTCTC 59.901 60.000 0.00 0.00 0.00 3.20
2715 7236 4.357142 TCGTATCGGTAACATCTCAAAGC 58.643 43.478 0.00 0.00 0.00 3.51
2770 7291 3.764049 GAACACCGTCGCGCACTC 61.764 66.667 8.75 0.00 0.00 3.51
2793 7319 2.216898 GCTCTCCTACATGCCATGAAC 58.783 52.381 12.53 0.00 0.00 3.18
2813 7339 2.530958 AATTCCCCTGTGGTACGCGG 62.531 60.000 12.47 0.00 45.01 6.46
2821 7347 3.006859 GGTTTCTTGGAAATTCCCCTGTG 59.993 47.826 9.87 0.00 35.03 3.66
2859 7386 2.278013 CGAAGCTAGCGTCCGACC 60.278 66.667 22.52 0.94 0.00 4.79
2862 7389 1.868251 GACACGAAGCTAGCGTCCG 60.868 63.158 22.52 20.86 40.44 4.79
2866 7393 2.161486 GCCTGACACGAAGCTAGCG 61.161 63.158 9.55 7.29 0.00 4.26
2873 7400 3.762288 AGTACATAAGAGCCTGACACGAA 59.238 43.478 0.00 0.00 0.00 3.85
2879 7406 6.993308 CAGTAGTAGAGTACATAAGAGCCTGA 59.007 42.308 0.00 0.00 0.00 3.86
2896 7423 3.499157 GCTCGTGATCCCTACAGTAGTAG 59.501 52.174 6.84 0.00 45.90 2.57
2897 7424 3.474600 GCTCGTGATCCCTACAGTAGTA 58.525 50.000 6.84 0.00 0.00 1.82
2898 7425 2.299521 GCTCGTGATCCCTACAGTAGT 58.700 52.381 6.84 0.00 0.00 2.73
2899 7426 1.264557 CGCTCGTGATCCCTACAGTAG 59.735 57.143 0.00 0.00 0.00 2.57
2918 7445 1.630244 CTTTCCTGCGTTCCTGCTCG 61.630 60.000 0.00 0.00 35.36 5.03
2931 7458 4.379302 AAGCCTGAATCAGTTCTTTCCT 57.621 40.909 9.63 0.00 35.33 3.36
3040 7569 4.089208 CGATCAACTCTGTTGACGAAGAAG 59.911 45.833 14.23 0.28 0.00 2.85
3041 7570 3.981416 CGATCAACTCTGTTGACGAAGAA 59.019 43.478 14.23 0.00 0.00 2.52
3042 7571 3.004419 ACGATCAACTCTGTTGACGAAGA 59.996 43.478 25.63 6.24 32.00 2.87
3044 7573 3.364889 ACGATCAACTCTGTTGACGAA 57.635 42.857 25.63 7.03 32.00 3.85
3045 7574 3.049912 CAACGATCAACTCTGTTGACGA 58.950 45.455 25.63 7.29 39.03 4.20
3046 7575 3.049912 TCAACGATCAACTCTGTTGACG 58.950 45.455 21.35 21.35 39.83 4.35
3047 7576 5.597813 AATCAACGATCAACTCTGTTGAC 57.402 39.130 14.23 8.46 43.43 3.18
3048 7577 5.757808 TGAAATCAACGATCAACTCTGTTGA 59.242 36.000 14.29 14.29 44.06 3.18
3049 7578 5.989249 TGAAATCAACGATCAACTCTGTTG 58.011 37.500 4.25 4.25 38.54 3.33
3062 7609 5.456192 AATCTAACGAGCTGAAATCAACG 57.544 39.130 0.00 0.00 0.00 4.10
3103 7650 9.777297 TGAATCGATGGAATGAGATTGTTTATA 57.223 29.630 0.00 0.00 32.61 0.98
3104 7651 8.681486 TGAATCGATGGAATGAGATTGTTTAT 57.319 30.769 0.00 0.00 32.61 1.40
3105 7652 8.397906 GTTGAATCGATGGAATGAGATTGTTTA 58.602 33.333 0.00 0.00 32.61 2.01
3106 7653 7.253422 GTTGAATCGATGGAATGAGATTGTTT 58.747 34.615 0.00 0.00 32.61 2.83
3107 7654 6.183360 GGTTGAATCGATGGAATGAGATTGTT 60.183 38.462 0.00 0.00 32.61 2.83
3108 7655 5.297776 GGTTGAATCGATGGAATGAGATTGT 59.702 40.000 0.00 0.00 32.61 2.71
3109 7656 5.530171 AGGTTGAATCGATGGAATGAGATTG 59.470 40.000 0.00 0.00 32.61 2.67
3110 7657 5.688807 AGGTTGAATCGATGGAATGAGATT 58.311 37.500 0.00 0.00 34.36 2.40
3111 7658 5.301835 AGGTTGAATCGATGGAATGAGAT 57.698 39.130 0.00 0.00 0.00 2.75
3112 7659 4.760530 AGGTTGAATCGATGGAATGAGA 57.239 40.909 0.00 0.00 0.00 3.27
3113 7660 6.707608 TGATTAGGTTGAATCGATGGAATGAG 59.292 38.462 0.00 0.00 38.46 2.90
3114 7661 6.591001 TGATTAGGTTGAATCGATGGAATGA 58.409 36.000 0.00 0.00 38.46 2.57
3115 7662 6.866010 TGATTAGGTTGAATCGATGGAATG 57.134 37.500 0.00 0.00 38.46 2.67
3116 7663 7.226441 TGATGATTAGGTTGAATCGATGGAAT 58.774 34.615 0.00 0.00 38.46 3.01
3117 7664 6.591001 TGATGATTAGGTTGAATCGATGGAA 58.409 36.000 0.00 0.00 38.46 3.53
3118 7665 6.173427 TGATGATTAGGTTGAATCGATGGA 57.827 37.500 0.00 0.00 38.46 3.41
3119 7666 6.866010 TTGATGATTAGGTTGAATCGATGG 57.134 37.500 0.00 0.00 38.46 3.51
3120 7667 7.868775 ACATTGATGATTAGGTTGAATCGATG 58.131 34.615 0.00 8.84 41.72 3.84
3121 7668 7.716560 TGACATTGATGATTAGGTTGAATCGAT 59.283 33.333 0.00 0.00 38.46 3.59
3122 7669 7.047271 TGACATTGATGATTAGGTTGAATCGA 58.953 34.615 0.00 0.00 38.46 3.59
3123 7670 7.250445 TGACATTGATGATTAGGTTGAATCG 57.750 36.000 0.00 0.00 38.46 3.34
3125 7672 8.790718 GCTATGACATTGATGATTAGGTTGAAT 58.209 33.333 0.73 0.00 0.00 2.57
3126 7673 7.229306 GGCTATGACATTGATGATTAGGTTGAA 59.771 37.037 0.73 0.00 0.00 2.69
3127 7674 6.712095 GGCTATGACATTGATGATTAGGTTGA 59.288 38.462 0.73 0.00 0.00 3.18
3128 7675 6.487668 TGGCTATGACATTGATGATTAGGTTG 59.512 38.462 0.73 0.00 0.00 3.77
3129 7676 6.604171 TGGCTATGACATTGATGATTAGGTT 58.396 36.000 0.73 0.00 0.00 3.50
3130 7677 6.191657 TGGCTATGACATTGATGATTAGGT 57.808 37.500 0.73 0.00 0.00 3.08
3131 7678 6.882678 TCATGGCTATGACATTGATGATTAGG 59.117 38.462 8.93 0.00 38.37 2.69
3132 7679 7.916914 TCATGGCTATGACATTGATGATTAG 57.083 36.000 8.93 0.00 38.37 1.73
3145 7692 0.918258 TGGGCTTGTCATGGCTATGA 59.082 50.000 8.93 8.93 40.92 2.15
3146 7693 1.315690 CTGGGCTTGTCATGGCTATG 58.684 55.000 3.17 3.17 35.57 2.23
3147 7694 0.184451 CCTGGGCTTGTCATGGCTAT 59.816 55.000 11.41 0.00 0.00 2.97
3148 7695 1.609239 CCTGGGCTTGTCATGGCTA 59.391 57.895 11.41 5.37 0.00 3.93
3149 7696 2.357836 CCTGGGCTTGTCATGGCT 59.642 61.111 11.41 0.00 0.00 4.75
3150 7697 2.757099 CCCTGGGCTTGTCATGGC 60.757 66.667 0.00 3.86 0.00 4.40
3151 7698 1.379044 GACCCTGGGCTTGTCATGG 60.379 63.158 14.08 0.00 0.00 3.66
3152 7699 0.251297 TTGACCCTGGGCTTGTCATG 60.251 55.000 14.08 0.00 38.68 3.07
3153 7700 0.706433 ATTGACCCTGGGCTTGTCAT 59.294 50.000 14.08 0.00 38.68 3.06
3154 7701 0.038166 GATTGACCCTGGGCTTGTCA 59.962 55.000 14.08 6.12 37.24 3.58
3155 7702 0.038166 TGATTGACCCTGGGCTTGTC 59.962 55.000 14.08 7.22 0.00 3.18
3156 7703 0.251341 GTGATTGACCCTGGGCTTGT 60.251 55.000 14.08 0.00 0.00 3.16
3157 7704 0.038744 AGTGATTGACCCTGGGCTTG 59.961 55.000 14.08 0.00 0.00 4.01
3158 7705 1.561542 CTAGTGATTGACCCTGGGCTT 59.438 52.381 14.08 0.00 0.00 4.35
3159 7706 1.207791 CTAGTGATTGACCCTGGGCT 58.792 55.000 14.08 2.04 0.00 5.19
3160 7707 0.464554 GCTAGTGATTGACCCTGGGC 60.465 60.000 14.08 6.42 0.00 5.36
3161 7708 1.207791 AGCTAGTGATTGACCCTGGG 58.792 55.000 12.28 12.28 0.00 4.45
3162 7709 4.835615 ACTATAGCTAGTGATTGACCCTGG 59.164 45.833 0.00 0.00 36.81 4.45
3174 7721 6.636562 ACGATGTTTAGCACTATAGCTAGT 57.363 37.500 0.00 0.00 46.77 2.57
3175 7722 7.648112 TGAAACGATGTTTAGCACTATAGCTAG 59.352 37.037 0.00 0.00 46.77 3.42
3176 7723 7.434307 GTGAAACGATGTTTAGCACTATAGCTA 59.566 37.037 0.00 0.00 44.50 3.32
3177 7724 7.844993 AGTGAAACGATGTTTAGCACTATAGCT 60.845 37.037 12.37 0.00 45.76 3.32
3178 7725 6.255887 AGTGAAACGATGTTTAGCACTATAGC 59.744 38.462 12.37 0.00 45.86 2.97
3179 7726 7.757097 AGTGAAACGATGTTTAGCACTATAG 57.243 36.000 12.37 0.00 45.86 1.31
3180 7727 8.245491 TGTAGTGAAACGATGTTTAGCACTATA 58.755 33.333 18.68 15.55 45.86 1.31
3181 7728 7.094631 TGTAGTGAAACGATGTTTAGCACTAT 58.905 34.615 18.68 5.12 45.86 2.12
3182 7729 6.448852 TGTAGTGAAACGATGTTTAGCACTA 58.551 36.000 14.75 14.75 45.86 2.74
3183 7730 5.294356 TGTAGTGAAACGATGTTTAGCACT 58.706 37.500 16.14 16.14 45.86 4.40
3184 7731 5.176958 ACTGTAGTGAAACGATGTTTAGCAC 59.823 40.000 0.00 6.27 45.86 4.40
3185 7732 5.294356 ACTGTAGTGAAACGATGTTTAGCA 58.706 37.500 0.00 0.00 45.86 3.49
3186 7733 5.840940 ACTGTAGTGAAACGATGTTTAGC 57.159 39.130 0.00 0.00 45.86 3.09
3200 7747 4.156922 TGGGTTGTTTTGTTCACTGTAGTG 59.843 41.667 5.67 5.67 46.91 2.74
3201 7748 4.337145 TGGGTTGTTTTGTTCACTGTAGT 58.663 39.130 0.00 0.00 0.00 2.73
3202 7749 4.974368 TGGGTTGTTTTGTTCACTGTAG 57.026 40.909 0.00 0.00 0.00 2.74
3203 7750 4.440802 GCATGGGTTGTTTTGTTCACTGTA 60.441 41.667 0.00 0.00 0.00 2.74
3204 7751 3.678529 GCATGGGTTGTTTTGTTCACTGT 60.679 43.478 0.00 0.00 0.00 3.55
3205 7752 2.865551 GCATGGGTTGTTTTGTTCACTG 59.134 45.455 0.00 0.00 0.00 3.66
3206 7753 2.158971 GGCATGGGTTGTTTTGTTCACT 60.159 45.455 0.00 0.00 0.00 3.41
3207 7754 2.209273 GGCATGGGTTGTTTTGTTCAC 58.791 47.619 0.00 0.00 0.00 3.18
3208 7755 1.833630 TGGCATGGGTTGTTTTGTTCA 59.166 42.857 0.00 0.00 0.00 3.18
3209 7756 2.611225 TGGCATGGGTTGTTTTGTTC 57.389 45.000 0.00 0.00 0.00 3.18
3210 7757 2.437281 TCATGGCATGGGTTGTTTTGTT 59.563 40.909 26.15 0.00 0.00 2.83
3211 7758 2.045524 TCATGGCATGGGTTGTTTTGT 58.954 42.857 26.15 0.00 0.00 2.83
3212 7759 2.415776 GTCATGGCATGGGTTGTTTTG 58.584 47.619 26.15 0.00 0.00 2.44
3213 7760 1.347378 GGTCATGGCATGGGTTGTTTT 59.653 47.619 26.15 0.00 0.00 2.43
3214 7761 0.975887 GGTCATGGCATGGGTTGTTT 59.024 50.000 26.15 0.00 0.00 2.83
3215 7762 0.904394 GGGTCATGGCATGGGTTGTT 60.904 55.000 26.15 0.00 0.00 2.83
3216 7763 1.305213 GGGTCATGGCATGGGTTGT 60.305 57.895 26.15 0.00 0.00 3.32
3217 7764 1.000739 AGGGTCATGGCATGGGTTG 59.999 57.895 26.15 2.90 0.00 3.77
3218 7765 1.000739 CAGGGTCATGGCATGGGTT 59.999 57.895 26.15 8.07 0.00 4.11
3219 7766 2.685366 CAGGGTCATGGCATGGGT 59.315 61.111 26.15 6.79 0.00 4.51
3220 7767 1.644437 TACCAGGGTCATGGCATGGG 61.644 60.000 26.15 20.30 44.80 4.00
3221 7768 0.479815 ATACCAGGGTCATGGCATGG 59.520 55.000 26.15 16.84 44.80 3.66
3222 7769 1.546323 GGATACCAGGGTCATGGCATG 60.546 57.143 21.42 21.42 44.80 4.06
3223 7770 0.773644 GGATACCAGGGTCATGGCAT 59.226 55.000 0.00 0.00 44.80 4.40
3224 7771 0.327480 AGGATACCAGGGTCATGGCA 60.327 55.000 0.00 0.00 44.80 4.92
3225 7772 0.846693 AAGGATACCAGGGTCATGGC 59.153 55.000 1.17 0.00 44.80 4.40
3226 7773 1.143684 CCAAGGATACCAGGGTCATGG 59.856 57.143 0.00 0.00 46.47 3.66
3227 7774 1.846439 ACCAAGGATACCAGGGTCATG 59.154 52.381 0.00 0.00 28.33 3.07
3228 7775 2.242196 CAACCAAGGATACCAGGGTCAT 59.758 50.000 0.00 0.00 32.39 3.06
3229 7776 1.633432 CAACCAAGGATACCAGGGTCA 59.367 52.381 0.00 0.00 32.39 4.02
3230 7777 1.064685 CCAACCAAGGATACCAGGGTC 60.065 57.143 0.00 0.00 32.39 4.46
3231 7778 0.999712 CCAACCAAGGATACCAGGGT 59.000 55.000 0.00 0.00 34.46 4.34
3232 7779 0.395724 GCCAACCAAGGATACCAGGG 60.396 60.000 0.00 0.00 37.17 4.45
3233 7780 0.625849 AGCCAACCAAGGATACCAGG 59.374 55.000 0.00 0.00 37.17 4.45
3234 7781 2.741878 CGTAGCCAACCAAGGATACCAG 60.742 54.545 3.15 0.00 45.42 4.00
3235 7782 1.208535 CGTAGCCAACCAAGGATACCA 59.791 52.381 3.15 0.00 45.42 3.25
3236 7783 1.949465 CGTAGCCAACCAAGGATACC 58.051 55.000 3.15 0.00 45.42 2.73
3251 7798 1.068585 GTGATTACCGGGGGCGTAG 59.931 63.158 6.32 0.00 0.00 3.51
3252 7799 1.685077 TGTGATTACCGGGGGCGTA 60.685 57.895 6.32 0.00 0.00 4.42
3253 7800 3.004354 TGTGATTACCGGGGGCGT 61.004 61.111 6.32 0.00 0.00 5.68
3254 7801 2.512974 GTGTGATTACCGGGGGCG 60.513 66.667 6.32 0.00 0.00 6.13
3255 7802 1.747745 GTGTGTGATTACCGGGGGC 60.748 63.158 6.32 0.00 0.00 5.80
3256 7803 0.675522 GTGTGTGTGATTACCGGGGG 60.676 60.000 6.32 0.00 0.00 5.40
3257 7804 0.035598 TGTGTGTGTGATTACCGGGG 59.964 55.000 6.32 0.00 0.00 5.73
3258 7805 1.153353 GTGTGTGTGTGATTACCGGG 58.847 55.000 6.32 0.00 0.00 5.73
3259 7806 1.872388 TGTGTGTGTGTGATTACCGG 58.128 50.000 0.00 0.00 0.00 5.28
3260 7807 3.953874 TTTGTGTGTGTGTGATTACCG 57.046 42.857 0.00 0.00 0.00 4.02
3261 7808 5.493133 TCTTTTGTGTGTGTGTGATTACC 57.507 39.130 0.00 0.00 0.00 2.85
3262 7809 6.468956 CAGTTCTTTTGTGTGTGTGTGATTAC 59.531 38.462 0.00 0.00 0.00 1.89
3263 7810 6.550843 CAGTTCTTTTGTGTGTGTGTGATTA 58.449 36.000 0.00 0.00 0.00 1.75
3264 7811 5.401550 CAGTTCTTTTGTGTGTGTGTGATT 58.598 37.500 0.00 0.00 0.00 2.57
3265 7812 4.675146 GCAGTTCTTTTGTGTGTGTGTGAT 60.675 41.667 0.00 0.00 0.00 3.06
3266 7813 3.365868 GCAGTTCTTTTGTGTGTGTGTGA 60.366 43.478 0.00 0.00 0.00 3.58
3267 7814 2.916716 GCAGTTCTTTTGTGTGTGTGTG 59.083 45.455 0.00 0.00 0.00 3.82
3268 7815 2.414029 CGCAGTTCTTTTGTGTGTGTGT 60.414 45.455 0.00 0.00 0.00 3.72
3269 7816 2.176369 CGCAGTTCTTTTGTGTGTGTG 58.824 47.619 0.00 0.00 0.00 3.82
3270 7817 1.810151 ACGCAGTTCTTTTGTGTGTGT 59.190 42.857 0.00 0.00 37.78 3.72
3271 7818 2.176369 CACGCAGTTCTTTTGTGTGTG 58.824 47.619 9.96 1.27 46.57 3.82
3272 7819 2.542766 CACGCAGTTCTTTTGTGTGT 57.457 45.000 9.96 0.00 46.57 3.72
3274 7821 3.267483 ACTACACGCAGTTCTTTTGTGT 58.733 40.909 1.73 1.73 41.61 3.72
3275 7822 3.944422 ACTACACGCAGTTCTTTTGTG 57.056 42.857 0.00 0.00 41.61 3.33
3276 7823 5.006358 CACTTACTACACGCAGTTCTTTTGT 59.994 40.000 0.00 0.00 41.61 2.83
3277 7824 5.432157 CACTTACTACACGCAGTTCTTTTG 58.568 41.667 0.00 0.00 41.61 2.44
3278 7825 4.510340 CCACTTACTACACGCAGTTCTTTT 59.490 41.667 0.00 0.00 41.61 2.27
3279 7826 4.056050 CCACTTACTACACGCAGTTCTTT 58.944 43.478 0.00 0.00 41.61 2.52
3280 7827 3.319972 TCCACTTACTACACGCAGTTCTT 59.680 43.478 0.00 0.00 41.61 2.52
3281 7828 2.889045 TCCACTTACTACACGCAGTTCT 59.111 45.455 0.00 0.00 41.61 3.01
3282 7829 3.293311 TCCACTTACTACACGCAGTTC 57.707 47.619 0.00 0.00 41.61 3.01
3283 7830 3.650139 CTTCCACTTACTACACGCAGTT 58.350 45.455 0.00 0.00 41.61 3.16
3285 7832 1.993370 GCTTCCACTTACTACACGCAG 59.007 52.381 0.00 0.00 0.00 5.18
3286 7833 1.616865 AGCTTCCACTTACTACACGCA 59.383 47.619 0.00 0.00 0.00 5.24
3287 7834 2.365408 AGCTTCCACTTACTACACGC 57.635 50.000 0.00 0.00 0.00 5.34
3288 7835 4.157289 TCCTAAGCTTCCACTTACTACACG 59.843 45.833 0.00 0.00 0.00 4.49
3289 7836 5.656213 TCCTAAGCTTCCACTTACTACAC 57.344 43.478 0.00 0.00 0.00 2.90
3290 7837 5.720041 ACATCCTAAGCTTCCACTTACTACA 59.280 40.000 0.00 0.00 0.00 2.74
3291 7838 6.043411 CACATCCTAAGCTTCCACTTACTAC 58.957 44.000 0.00 0.00 0.00 2.73
3292 7839 5.720041 ACACATCCTAAGCTTCCACTTACTA 59.280 40.000 0.00 0.00 0.00 1.82
3293 7840 4.532521 ACACATCCTAAGCTTCCACTTACT 59.467 41.667 0.00 0.00 0.00 2.24
3294 7841 4.833390 ACACATCCTAAGCTTCCACTTAC 58.167 43.478 0.00 0.00 0.00 2.34
3295 7842 5.499004 AACACATCCTAAGCTTCCACTTA 57.501 39.130 0.00 0.00 0.00 2.24
3296 7843 4.373156 AACACATCCTAAGCTTCCACTT 57.627 40.909 0.00 0.00 0.00 3.16
3297 7844 4.074970 CAAACACATCCTAAGCTTCCACT 58.925 43.478 0.00 0.00 0.00 4.00
3298 7845 3.191371 CCAAACACATCCTAAGCTTCCAC 59.809 47.826 0.00 0.00 0.00 4.02
3299 7846 3.181434 ACCAAACACATCCTAAGCTTCCA 60.181 43.478 0.00 0.00 0.00 3.53
3300 7847 3.421844 ACCAAACACATCCTAAGCTTCC 58.578 45.455 0.00 0.00 0.00 3.46
3301 7848 4.636206 CCTACCAAACACATCCTAAGCTTC 59.364 45.833 0.00 0.00 0.00 3.86
3302 7849 4.567747 CCCTACCAAACACATCCTAAGCTT 60.568 45.833 3.48 3.48 0.00 3.74
3303 7850 3.054361 CCCTACCAAACACATCCTAAGCT 60.054 47.826 0.00 0.00 0.00 3.74
3304 7851 3.279434 CCCTACCAAACACATCCTAAGC 58.721 50.000 0.00 0.00 0.00 3.09
3305 7852 4.261801 CACCCTACCAAACACATCCTAAG 58.738 47.826 0.00 0.00 0.00 2.18
3306 7853 3.560453 GCACCCTACCAAACACATCCTAA 60.560 47.826 0.00 0.00 0.00 2.69
3307 7854 2.026636 GCACCCTACCAAACACATCCTA 60.027 50.000 0.00 0.00 0.00 2.94
3308 7855 1.271926 GCACCCTACCAAACACATCCT 60.272 52.381 0.00 0.00 0.00 3.24
3309 7856 1.173913 GCACCCTACCAAACACATCC 58.826 55.000 0.00 0.00 0.00 3.51
3310 7857 1.904287 TGCACCCTACCAAACACATC 58.096 50.000 0.00 0.00 0.00 3.06
3311 7858 2.170166 CATGCACCCTACCAAACACAT 58.830 47.619 0.00 0.00 0.00 3.21
3312 7859 1.143889 TCATGCACCCTACCAAACACA 59.856 47.619 0.00 0.00 0.00 3.72
3313 7860 1.812571 CTCATGCACCCTACCAAACAC 59.187 52.381 0.00 0.00 0.00 3.32
3314 7861 1.271871 CCTCATGCACCCTACCAAACA 60.272 52.381 0.00 0.00 0.00 2.83
3315 7862 1.463674 CCTCATGCACCCTACCAAAC 58.536 55.000 0.00 0.00 0.00 2.93
3316 7863 0.323360 GCCTCATGCACCCTACCAAA 60.323 55.000 0.00 0.00 40.77 3.28
3317 7864 1.207488 AGCCTCATGCACCCTACCAA 61.207 55.000 0.00 0.00 44.83 3.67
3318 7865 0.326143 TAGCCTCATGCACCCTACCA 60.326 55.000 0.00 0.00 44.83 3.25
3319 7866 0.837272 TTAGCCTCATGCACCCTACC 59.163 55.000 0.00 0.00 44.83 3.18
3320 7867 2.710096 TTTAGCCTCATGCACCCTAC 57.290 50.000 0.00 0.00 44.83 3.18
3321 7868 2.576191 ACTTTTAGCCTCATGCACCCTA 59.424 45.455 0.00 0.00 44.83 3.53
3322 7869 1.355720 ACTTTTAGCCTCATGCACCCT 59.644 47.619 0.00 0.00 44.83 4.34
3323 7870 1.839424 ACTTTTAGCCTCATGCACCC 58.161 50.000 0.00 0.00 44.83 4.61
3324 7871 3.367395 GGAAACTTTTAGCCTCATGCACC 60.367 47.826 0.00 0.00 44.83 5.01
3325 7872 3.507622 AGGAAACTTTTAGCCTCATGCAC 59.492 43.478 0.00 0.00 39.82 4.57
3326 7873 3.766545 AGGAAACTTTTAGCCTCATGCA 58.233 40.909 0.00 0.00 39.82 3.96
3327 7874 4.096532 GGTAGGAAACTTTTAGCCTCATGC 59.903 45.833 0.00 0.00 43.67 4.06
3328 7875 4.640647 GGGTAGGAAACTTTTAGCCTCATG 59.359 45.833 0.00 0.00 43.67 3.07
3329 7876 4.291249 TGGGTAGGAAACTTTTAGCCTCAT 59.709 41.667 0.00 0.00 43.67 2.90
3330 7877 3.653836 TGGGTAGGAAACTTTTAGCCTCA 59.346 43.478 0.00 0.00 43.67 3.86
3331 7878 4.296621 TGGGTAGGAAACTTTTAGCCTC 57.703 45.455 0.00 0.00 43.67 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.