Multiple sequence alignment - TraesCS2A01G194400
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G194400 | chr2A | 100.000 | 6765 | 0 | 0 | 1 | 6765 | 162412786 | 162419550 | 0.000000e+00 | 12493.0 |
1 | TraesCS2A01G194400 | chr2A | 85.802 | 162 | 19 | 3 | 2673 | 2832 | 162414838 | 162414997 | 1.170000e-37 | 169.0 |
2 | TraesCS2A01G194400 | chr2A | 85.802 | 162 | 19 | 3 | 2053 | 2212 | 162415458 | 162415617 | 1.170000e-37 | 169.0 |
3 | TraesCS2A01G194400 | chr2D | 92.873 | 3999 | 194 | 30 | 2747 | 6722 | 138697704 | 138693774 | 0.000000e+00 | 5722.0 |
4 | TraesCS2A01G194400 | chr2D | 89.882 | 2115 | 141 | 41 | 579 | 2647 | 138699798 | 138697711 | 0.000000e+00 | 2652.0 |
5 | TraesCS2A01G194400 | chr2D | 88.372 | 86 | 10 | 0 | 2127 | 2212 | 138697704 | 138697619 | 3.340000e-18 | 104.0 |
6 | TraesCS2A01G194400 | chr2D | 91.379 | 58 | 4 | 1 | 533 | 589 | 138700942 | 138700885 | 2.020000e-10 | 78.7 |
7 | TraesCS2A01G194400 | chr2D | 96.970 | 33 | 1 | 0 | 6117 | 6149 | 617418624 | 617418656 | 1.000000e-03 | 56.5 |
8 | TraesCS2A01G194400 | chr2B | 95.161 | 2542 | 76 | 10 | 2303 | 4801 | 197151328 | 197148791 | 0.000000e+00 | 3969.0 |
9 | TraesCS2A01G194400 | chr2B | 90.698 | 1677 | 79 | 33 | 622 | 2258 | 197152975 | 197151336 | 0.000000e+00 | 2161.0 |
10 | TraesCS2A01G194400 | chr2B | 92.624 | 1315 | 75 | 14 | 4786 | 6094 | 197148602 | 197147304 | 0.000000e+00 | 1871.0 |
11 | TraesCS2A01G194400 | chr2B | 82.748 | 655 | 73 | 13 | 6126 | 6765 | 197147303 | 197146674 | 1.280000e-151 | 547.0 |
12 | TraesCS2A01G194400 | chr2B | 79.180 | 317 | 36 | 13 | 304 | 605 | 197154901 | 197154600 | 6.920000e-45 | 193.0 |
13 | TraesCS2A01G194400 | chr2B | 85.802 | 162 | 19 | 3 | 2053 | 2212 | 197150948 | 197150789 | 1.170000e-37 | 169.0 |
14 | TraesCS2A01G194400 | chr2B | 89.256 | 121 | 12 | 1 | 2687 | 2807 | 197151523 | 197151404 | 4.230000e-32 | 150.0 |
15 | TraesCS2A01G194400 | chr2B | 83.529 | 85 | 14 | 0 | 2580 | 2664 | 752862808 | 752862892 | 5.620000e-11 | 80.5 |
16 | TraesCS2A01G194400 | chrUn | 84.821 | 336 | 42 | 5 | 2341 | 2673 | 36178708 | 36179037 | 5.060000e-86 | 329.0 |
17 | TraesCS2A01G194400 | chr7D | 85.560 | 277 | 37 | 2 | 1 | 277 | 51950744 | 51950471 | 3.090000e-73 | 287.0 |
18 | TraesCS2A01G194400 | chr7D | 84.965 | 286 | 38 | 4 | 1 | 284 | 45737873 | 45737591 | 1.110000e-72 | 285.0 |
19 | TraesCS2A01G194400 | chr7D | 92.308 | 65 | 5 | 0 | 2410 | 2474 | 79630360 | 79630296 | 7.220000e-15 | 93.5 |
20 | TraesCS2A01G194400 | chr7D | 94.444 | 54 | 3 | 0 | 2544 | 2597 | 135077957 | 135078010 | 4.350000e-12 | 84.2 |
21 | TraesCS2A01G194400 | chr7D | 90.566 | 53 | 5 | 0 | 2542 | 2594 | 25506333 | 25506385 | 3.380000e-08 | 71.3 |
22 | TraesCS2A01G194400 | chr4A | 84.758 | 269 | 37 | 3 | 1 | 268 | 299421925 | 299422190 | 4.020000e-67 | 267.0 |
23 | TraesCS2A01G194400 | chr5D | 84.364 | 275 | 38 | 5 | 1 | 274 | 107409781 | 107410051 | 1.450000e-66 | 265.0 |
24 | TraesCS2A01G194400 | chr5D | 78.113 | 265 | 49 | 4 | 2410 | 2673 | 502028857 | 502028601 | 7.020000e-35 | 159.0 |
25 | TraesCS2A01G194400 | chr5D | 81.935 | 155 | 25 | 2 | 2377 | 2531 | 502029297 | 502029146 | 1.980000e-25 | 128.0 |
26 | TraesCS2A01G194400 | chr5D | 88.525 | 61 | 7 | 0 | 2410 | 2470 | 548289400 | 548289460 | 2.620000e-09 | 75.0 |
27 | TraesCS2A01G194400 | chr7B | 85.281 | 231 | 32 | 2 | 1 | 230 | 652403361 | 652403132 | 3.150000e-58 | 237.0 |
28 | TraesCS2A01G194400 | chr7B | 82.879 | 257 | 41 | 3 | 1 | 256 | 652976410 | 652976156 | 1.900000e-55 | 228.0 |
29 | TraesCS2A01G194400 | chr7B | 82.292 | 192 | 27 | 5 | 1 | 191 | 652442633 | 652442448 | 7.020000e-35 | 159.0 |
30 | TraesCS2A01G194400 | chr3B | 85.380 | 171 | 23 | 2 | 1 | 171 | 788251479 | 788251311 | 6.970000e-40 | 176.0 |
31 | TraesCS2A01G194400 | chr3A | 84.328 | 134 | 21 | 0 | 2541 | 2674 | 151637680 | 151637547 | 1.530000e-26 | 132.0 |
32 | TraesCS2A01G194400 | chr7A | 83.206 | 131 | 19 | 1 | 2388 | 2518 | 82510744 | 82510617 | 4.290000e-22 | 117.0 |
33 | TraesCS2A01G194400 | chr7A | 92.593 | 54 | 4 | 0 | 2544 | 2597 | 134167892 | 134167945 | 2.020000e-10 | 78.7 |
34 | TraesCS2A01G194400 | chr5A | 79.141 | 163 | 28 | 5 | 2431 | 2591 | 675426944 | 675427102 | 2.580000e-19 | 108.0 |
35 | TraesCS2A01G194400 | chr3D | 94.737 | 38 | 2 | 0 | 2348 | 2385 | 158806089 | 158806052 | 7.330000e-05 | 60.2 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G194400 | chr2A | 162412786 | 162419550 | 6764 | False | 12493.000000 | 12493 | 100.000000 | 1 | 6765 | 1 | chr2A.!!$F1 | 6764 |
1 | TraesCS2A01G194400 | chr2D | 138693774 | 138700942 | 7168 | True | 2139.175000 | 5722 | 90.626500 | 533 | 6722 | 4 | chr2D.!!$R1 | 6189 |
2 | TraesCS2A01G194400 | chr2B | 197146674 | 197154901 | 8227 | True | 1294.285714 | 3969 | 87.924143 | 304 | 6765 | 7 | chr2B.!!$R1 | 6461 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
104 | 105 | 0.036577 | CTGGCTTCACTGGGTCAGAG | 60.037 | 60.0 | 1.59 | 0.0 | 35.18 | 3.35 | F |
1123 | 3862 | 0.108329 | ACCAGGGCGTATCGTCTTTG | 60.108 | 55.0 | 0.00 | 0.0 | 0.00 | 2.77 | F |
1330 | 4073 | 0.741221 | CCCGCTCTCTTAGTTGGTGC | 60.741 | 60.0 | 0.00 | 0.0 | 0.00 | 5.01 | F |
2535 | 5302 | 0.462759 | GATCCTCCTGCCCAAAGACG | 60.463 | 60.0 | 0.00 | 0.0 | 0.00 | 4.18 | F |
3437 | 6221 | 0.449388 | GAGAACTGCTGAATTGGCCG | 59.551 | 55.0 | 0.00 | 0.0 | 0.00 | 6.13 | F |
4865 | 7885 | 0.108585 | TTGTCCAAGTCCTGACTGCC | 59.891 | 55.0 | 0.00 | 0.0 | 41.58 | 4.85 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1161 | 3900 | 0.105593 | AGATGATACTGCGTGGCCTG | 59.894 | 55.000 | 3.32 | 0.0 | 0.00 | 4.85 | R |
2386 | 5153 | 0.456221 | AGCGTTGTACTGGAGGATCG | 59.544 | 55.000 | 0.00 | 0.0 | 34.37 | 3.69 | R |
2743 | 5520 | 3.319755 | CCACTTGTTGGCAAAATAGCAG | 58.680 | 45.455 | 0.00 | 0.0 | 39.07 | 4.24 | R |
3890 | 6679 | 0.536006 | GGAAGACAAGTGCAGTGGCT | 60.536 | 55.000 | 0.00 | 0.0 | 41.91 | 4.75 | R |
5184 | 8207 | 0.543749 | GTATGCCAAGCTCCCTCAGT | 59.456 | 55.000 | 0.00 | 0.0 | 0.00 | 3.41 | R |
6579 | 9625 | 0.028770 | CTTCCGCACTGTTTTCGCAA | 59.971 | 50.000 | 0.00 | 0.0 | 0.00 | 4.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
17 | 18 | 3.555428 | GCTGTCAGGTGCGAAGTC | 58.445 | 61.111 | 1.14 | 0.00 | 0.00 | 3.01 |
18 | 19 | 2.029844 | GCTGTCAGGTGCGAAGTCC | 61.030 | 63.158 | 1.14 | 0.00 | 0.00 | 3.85 |
19 | 20 | 1.668294 | CTGTCAGGTGCGAAGTCCT | 59.332 | 57.895 | 0.00 | 0.00 | 34.83 | 3.85 |
20 | 21 | 0.389166 | CTGTCAGGTGCGAAGTCCTC | 60.389 | 60.000 | 0.00 | 0.00 | 32.62 | 3.71 |
21 | 22 | 0.827925 | TGTCAGGTGCGAAGTCCTCT | 60.828 | 55.000 | 0.00 | 0.00 | 32.62 | 3.69 |
22 | 23 | 0.109039 | GTCAGGTGCGAAGTCCTCTC | 60.109 | 60.000 | 0.00 | 0.00 | 32.62 | 3.20 |
23 | 24 | 0.251386 | TCAGGTGCGAAGTCCTCTCT | 60.251 | 55.000 | 0.00 | 0.00 | 32.62 | 3.10 |
24 | 25 | 1.004394 | TCAGGTGCGAAGTCCTCTCTA | 59.996 | 52.381 | 0.00 | 0.00 | 32.62 | 2.43 |
25 | 26 | 2.028130 | CAGGTGCGAAGTCCTCTCTAT | 58.972 | 52.381 | 0.00 | 0.00 | 32.62 | 1.98 |
26 | 27 | 3.118000 | TCAGGTGCGAAGTCCTCTCTATA | 60.118 | 47.826 | 0.00 | 0.00 | 32.62 | 1.31 |
27 | 28 | 3.823873 | CAGGTGCGAAGTCCTCTCTATAT | 59.176 | 47.826 | 0.00 | 0.00 | 32.62 | 0.86 |
28 | 29 | 3.823873 | AGGTGCGAAGTCCTCTCTATATG | 59.176 | 47.826 | 0.00 | 0.00 | 29.49 | 1.78 |
29 | 30 | 3.570550 | GGTGCGAAGTCCTCTCTATATGT | 59.429 | 47.826 | 0.00 | 0.00 | 0.00 | 2.29 |
30 | 31 | 4.038162 | GGTGCGAAGTCCTCTCTATATGTT | 59.962 | 45.833 | 0.00 | 0.00 | 0.00 | 2.71 |
31 | 32 | 5.241064 | GGTGCGAAGTCCTCTCTATATGTTA | 59.759 | 44.000 | 0.00 | 0.00 | 0.00 | 2.41 |
32 | 33 | 6.144175 | GTGCGAAGTCCTCTCTATATGTTAC | 58.856 | 44.000 | 0.00 | 0.00 | 0.00 | 2.50 |
33 | 34 | 5.826208 | TGCGAAGTCCTCTCTATATGTTACA | 59.174 | 40.000 | 0.00 | 0.00 | 0.00 | 2.41 |
34 | 35 | 6.144175 | GCGAAGTCCTCTCTATATGTTACAC | 58.856 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
35 | 36 | 6.016943 | GCGAAGTCCTCTCTATATGTTACACT | 60.017 | 42.308 | 0.00 | 0.00 | 0.00 | 3.55 |
36 | 37 | 7.356540 | CGAAGTCCTCTCTATATGTTACACTG | 58.643 | 42.308 | 0.00 | 0.00 | 0.00 | 3.66 |
37 | 38 | 7.012515 | CGAAGTCCTCTCTATATGTTACACTGT | 59.987 | 40.741 | 0.00 | 0.00 | 0.00 | 3.55 |
38 | 39 | 7.575414 | AGTCCTCTCTATATGTTACACTGTG | 57.425 | 40.000 | 6.19 | 6.19 | 0.00 | 3.66 |
39 | 40 | 6.039941 | AGTCCTCTCTATATGTTACACTGTGC | 59.960 | 42.308 | 7.90 | 0.00 | 0.00 | 4.57 |
40 | 41 | 5.891551 | TCCTCTCTATATGTTACACTGTGCA | 59.108 | 40.000 | 7.90 | 0.00 | 0.00 | 4.57 |
41 | 42 | 6.039829 | TCCTCTCTATATGTTACACTGTGCAG | 59.960 | 42.308 | 7.90 | 0.00 | 0.00 | 4.41 |
42 | 43 | 5.592054 | TCTCTATATGTTACACTGTGCAGC | 58.408 | 41.667 | 7.90 | 0.00 | 0.00 | 5.25 |
43 | 44 | 5.127031 | TCTCTATATGTTACACTGTGCAGCA | 59.873 | 40.000 | 7.90 | 3.62 | 0.00 | 4.41 |
44 | 45 | 5.729510 | TCTATATGTTACACTGTGCAGCAA | 58.270 | 37.500 | 7.90 | 0.00 | 0.00 | 3.91 |
45 | 46 | 6.169800 | TCTATATGTTACACTGTGCAGCAAA | 58.830 | 36.000 | 7.90 | 0.00 | 0.00 | 3.68 |
46 | 47 | 5.902613 | ATATGTTACACTGTGCAGCAAAT | 57.097 | 34.783 | 7.90 | 0.00 | 0.00 | 2.32 |
47 | 48 | 7.984617 | TCTATATGTTACACTGTGCAGCAAATA | 59.015 | 33.333 | 7.90 | 0.00 | 0.00 | 1.40 |
48 | 49 | 4.747540 | TGTTACACTGTGCAGCAAATAG | 57.252 | 40.909 | 7.90 | 0.00 | 0.00 | 1.73 |
49 | 50 | 3.501828 | TGTTACACTGTGCAGCAAATAGG | 59.498 | 43.478 | 7.90 | 0.00 | 0.00 | 2.57 |
50 | 51 | 2.566833 | ACACTGTGCAGCAAATAGGA | 57.433 | 45.000 | 7.90 | 0.00 | 0.00 | 2.94 |
51 | 52 | 3.077484 | ACACTGTGCAGCAAATAGGAT | 57.923 | 42.857 | 7.90 | 0.00 | 0.00 | 3.24 |
52 | 53 | 3.424703 | ACACTGTGCAGCAAATAGGATT | 58.575 | 40.909 | 7.90 | 0.00 | 0.00 | 3.01 |
53 | 54 | 3.828451 | ACACTGTGCAGCAAATAGGATTT | 59.172 | 39.130 | 7.90 | 0.00 | 0.00 | 2.17 |
54 | 55 | 4.281688 | ACACTGTGCAGCAAATAGGATTTT | 59.718 | 37.500 | 7.90 | 0.00 | 0.00 | 1.82 |
55 | 56 | 5.476599 | ACACTGTGCAGCAAATAGGATTTTA | 59.523 | 36.000 | 7.90 | 0.00 | 0.00 | 1.52 |
56 | 57 | 5.801947 | CACTGTGCAGCAAATAGGATTTTAC | 59.198 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
57 | 58 | 5.105756 | ACTGTGCAGCAAATAGGATTTTACC | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
58 | 59 | 4.159506 | TGTGCAGCAAATAGGATTTTACCC | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
59 | 60 | 4.159506 | GTGCAGCAAATAGGATTTTACCCA | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 4.51 |
60 | 61 | 4.159506 | TGCAGCAAATAGGATTTTACCCAC | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 4.61 |
61 | 62 | 4.441495 | GCAGCAAATAGGATTTTACCCACC | 60.441 | 45.833 | 0.00 | 0.00 | 0.00 | 4.61 |
62 | 63 | 4.709397 | CAGCAAATAGGATTTTACCCACCA | 59.291 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
63 | 64 | 4.709886 | AGCAAATAGGATTTTACCCACCAC | 59.290 | 41.667 | 0.00 | 0.00 | 0.00 | 4.16 |
64 | 65 | 4.439563 | GCAAATAGGATTTTACCCACCACG | 60.440 | 45.833 | 0.00 | 0.00 | 0.00 | 4.94 |
65 | 66 | 4.579647 | AATAGGATTTTACCCACCACGT | 57.420 | 40.909 | 0.00 | 0.00 | 0.00 | 4.49 |
66 | 67 | 2.194201 | AGGATTTTACCCACCACGTG | 57.806 | 50.000 | 9.08 | 9.08 | 0.00 | 4.49 |
75 | 76 | 4.466133 | CACCACGTGGGCAGTAAA | 57.534 | 55.556 | 36.47 | 0.00 | 42.05 | 2.01 |
76 | 77 | 2.941210 | CACCACGTGGGCAGTAAAT | 58.059 | 52.632 | 36.47 | 12.00 | 42.05 | 1.40 |
77 | 78 | 1.243902 | CACCACGTGGGCAGTAAATT | 58.756 | 50.000 | 36.47 | 11.21 | 42.05 | 1.82 |
78 | 79 | 2.428491 | CACCACGTGGGCAGTAAATTA | 58.572 | 47.619 | 36.47 | 0.00 | 42.05 | 1.40 |
79 | 80 | 2.814919 | CACCACGTGGGCAGTAAATTAA | 59.185 | 45.455 | 36.47 | 0.00 | 42.05 | 1.40 |
80 | 81 | 3.078837 | ACCACGTGGGCAGTAAATTAAG | 58.921 | 45.455 | 36.47 | 8.28 | 42.05 | 1.85 |
81 | 82 | 3.078837 | CCACGTGGGCAGTAAATTAAGT | 58.921 | 45.455 | 27.57 | 0.00 | 0.00 | 2.24 |
82 | 83 | 3.119990 | CCACGTGGGCAGTAAATTAAGTG | 60.120 | 47.826 | 27.57 | 0.00 | 0.00 | 3.16 |
83 | 84 | 3.078837 | ACGTGGGCAGTAAATTAAGTGG | 58.921 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
84 | 85 | 2.422127 | CGTGGGCAGTAAATTAAGTGGG | 59.578 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
85 | 86 | 2.165641 | GTGGGCAGTAAATTAAGTGGGC | 59.834 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
86 | 87 | 2.042433 | TGGGCAGTAAATTAAGTGGGCT | 59.958 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
87 | 88 | 2.427095 | GGGCAGTAAATTAAGTGGGCTG | 59.573 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
88 | 89 | 2.427095 | GGCAGTAAATTAAGTGGGCTGG | 59.573 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
89 | 90 | 2.159240 | GCAGTAAATTAAGTGGGCTGGC | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
90 | 91 | 3.356290 | CAGTAAATTAAGTGGGCTGGCT | 58.644 | 45.455 | 0.00 | 0.00 | 0.00 | 4.75 |
91 | 92 | 3.763897 | CAGTAAATTAAGTGGGCTGGCTT | 59.236 | 43.478 | 0.00 | 0.00 | 0.00 | 4.35 |
92 | 93 | 4.017126 | AGTAAATTAAGTGGGCTGGCTTC | 58.983 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
93 | 94 | 2.603075 | AATTAAGTGGGCTGGCTTCA | 57.397 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
94 | 95 | 1.839424 | ATTAAGTGGGCTGGCTTCAC | 58.161 | 50.000 | 0.00 | 1.73 | 0.00 | 3.18 |
95 | 96 | 0.771127 | TTAAGTGGGCTGGCTTCACT | 59.229 | 50.000 | 7.19 | 7.19 | 42.77 | 3.41 |
96 | 97 | 0.036732 | TAAGTGGGCTGGCTTCACTG | 59.963 | 55.000 | 12.48 | 0.00 | 41.03 | 3.66 |
97 | 98 | 2.674380 | GTGGGCTGGCTTCACTGG | 60.674 | 66.667 | 0.00 | 0.00 | 0.00 | 4.00 |
98 | 99 | 3.970410 | TGGGCTGGCTTCACTGGG | 61.970 | 66.667 | 0.00 | 0.00 | 0.00 | 4.45 |
99 | 100 | 3.971702 | GGGCTGGCTTCACTGGGT | 61.972 | 66.667 | 0.00 | 0.00 | 0.00 | 4.51 |
100 | 101 | 2.360475 | GGCTGGCTTCACTGGGTC | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 4.46 |
101 | 102 | 2.431683 | GCTGGCTTCACTGGGTCA | 59.568 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
102 | 103 | 1.673665 | GCTGGCTTCACTGGGTCAG | 60.674 | 63.158 | 0.00 | 0.00 | 37.52 | 3.51 |
103 | 104 | 2.061220 | CTGGCTTCACTGGGTCAGA | 58.939 | 57.895 | 1.59 | 0.00 | 35.18 | 3.27 |
104 | 105 | 0.036577 | CTGGCTTCACTGGGTCAGAG | 60.037 | 60.000 | 1.59 | 0.00 | 35.18 | 3.35 |
105 | 106 | 1.376553 | GGCTTCACTGGGTCAGAGC | 60.377 | 63.158 | 1.59 | 0.84 | 35.18 | 4.09 |
106 | 107 | 1.739562 | GCTTCACTGGGTCAGAGCG | 60.740 | 63.158 | 1.59 | 0.00 | 35.18 | 5.03 |
107 | 108 | 1.739562 | CTTCACTGGGTCAGAGCGC | 60.740 | 63.158 | 0.00 | 0.00 | 35.18 | 5.92 |
108 | 109 | 3.573772 | TTCACTGGGTCAGAGCGCG | 62.574 | 63.158 | 0.00 | 0.00 | 35.18 | 6.86 |
109 | 110 | 4.363990 | CACTGGGTCAGAGCGCGT | 62.364 | 66.667 | 8.43 | 0.00 | 35.18 | 6.01 |
110 | 111 | 4.363990 | ACTGGGTCAGAGCGCGTG | 62.364 | 66.667 | 8.43 | 3.72 | 35.18 | 5.34 |
111 | 112 | 4.363990 | CTGGGTCAGAGCGCGTGT | 62.364 | 66.667 | 8.43 | 0.00 | 32.44 | 4.49 |
112 | 113 | 4.662961 | TGGGTCAGAGCGCGTGTG | 62.663 | 66.667 | 8.43 | 3.61 | 0.00 | 3.82 |
119 | 120 | 4.830765 | GAGCGCGTGTGGCCCATA | 62.831 | 66.667 | 8.43 | 0.00 | 38.94 | 2.74 |
120 | 121 | 4.175337 | AGCGCGTGTGGCCCATAT | 62.175 | 61.111 | 8.43 | 0.00 | 38.94 | 1.78 |
121 | 122 | 2.280524 | GCGCGTGTGGCCCATATA | 60.281 | 61.111 | 8.43 | 0.00 | 38.94 | 0.86 |
122 | 123 | 2.604174 | GCGCGTGTGGCCCATATAC | 61.604 | 63.158 | 8.43 | 0.00 | 38.94 | 1.47 |
123 | 124 | 2.307309 | CGCGTGTGGCCCATATACG | 61.307 | 63.158 | 0.00 | 12.06 | 38.94 | 3.06 |
124 | 125 | 1.068417 | GCGTGTGGCCCATATACGA | 59.932 | 57.895 | 18.26 | 0.00 | 36.94 | 3.43 |
125 | 126 | 0.531090 | GCGTGTGGCCCATATACGAA | 60.531 | 55.000 | 18.26 | 0.00 | 36.94 | 3.85 |
126 | 127 | 1.942677 | CGTGTGGCCCATATACGAAA | 58.057 | 50.000 | 11.23 | 0.00 | 36.94 | 3.46 |
127 | 128 | 2.489971 | CGTGTGGCCCATATACGAAAT | 58.510 | 47.619 | 11.23 | 0.00 | 36.94 | 2.17 |
128 | 129 | 2.875933 | CGTGTGGCCCATATACGAAATT | 59.124 | 45.455 | 11.23 | 0.00 | 36.94 | 1.82 |
129 | 130 | 3.059188 | CGTGTGGCCCATATACGAAATTC | 60.059 | 47.826 | 11.23 | 0.00 | 36.94 | 2.17 |
130 | 131 | 4.134563 | GTGTGGCCCATATACGAAATTCT | 58.865 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
131 | 132 | 4.024048 | GTGTGGCCCATATACGAAATTCTG | 60.024 | 45.833 | 0.00 | 0.00 | 0.00 | 3.02 |
132 | 133 | 4.141597 | TGTGGCCCATATACGAAATTCTGA | 60.142 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
133 | 134 | 4.819630 | GTGGCCCATATACGAAATTCTGAA | 59.180 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
134 | 135 | 4.819630 | TGGCCCATATACGAAATTCTGAAC | 59.180 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
135 | 136 | 4.819630 | GGCCCATATACGAAATTCTGAACA | 59.180 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
136 | 137 | 5.298276 | GGCCCATATACGAAATTCTGAACAA | 59.702 | 40.000 | 0.00 | 0.00 | 0.00 | 2.83 |
137 | 138 | 6.183360 | GGCCCATATACGAAATTCTGAACAAA | 60.183 | 38.462 | 0.00 | 0.00 | 0.00 | 2.83 |
138 | 139 | 6.691388 | GCCCATATACGAAATTCTGAACAAAC | 59.309 | 38.462 | 0.00 | 0.00 | 0.00 | 2.93 |
139 | 140 | 7.193595 | CCCATATACGAAATTCTGAACAAACC | 58.806 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
140 | 141 | 7.148154 | CCCATATACGAAATTCTGAACAAACCA | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
141 | 142 | 8.405531 | CCATATACGAAATTCTGAACAAACCAT | 58.594 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
142 | 143 | 9.787532 | CATATACGAAATTCTGAACAAACCATT | 57.212 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
147 | 148 | 9.191995 | ACGAAATTCTGAACAAACCATTATTTC | 57.808 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
148 | 149 | 9.410556 | CGAAATTCTGAACAAACCATTATTTCT | 57.589 | 29.630 | 0.00 | 0.00 | 30.98 | 2.52 |
159 | 160 | 9.981114 | ACAAACCATTATTTCTTTTCTAACAGG | 57.019 | 29.630 | 0.00 | 0.00 | 0.00 | 4.00 |
162 | 163 | 8.581253 | ACCATTATTTCTTTTCTAACAGGAGG | 57.419 | 34.615 | 0.00 | 0.00 | 0.00 | 4.30 |
163 | 164 | 8.390921 | ACCATTATTTCTTTTCTAACAGGAGGA | 58.609 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
164 | 165 | 8.897752 | CCATTATTTCTTTTCTAACAGGAGGAG | 58.102 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
165 | 166 | 8.897752 | CATTATTTCTTTTCTAACAGGAGGAGG | 58.102 | 37.037 | 0.00 | 0.00 | 0.00 | 4.30 |
166 | 167 | 3.983044 | TCTTTTCTAACAGGAGGAGGC | 57.017 | 47.619 | 0.00 | 0.00 | 0.00 | 4.70 |
167 | 168 | 3.248024 | TCTTTTCTAACAGGAGGAGGCA | 58.752 | 45.455 | 0.00 | 0.00 | 0.00 | 4.75 |
168 | 169 | 3.008049 | TCTTTTCTAACAGGAGGAGGCAC | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 5.01 |
169 | 170 | 2.024176 | TTCTAACAGGAGGAGGCACA | 57.976 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
170 | 171 | 2.024176 | TCTAACAGGAGGAGGCACAA | 57.976 | 50.000 | 0.00 | 0.00 | 0.00 | 3.33 |
171 | 172 | 2.334977 | TCTAACAGGAGGAGGCACAAA | 58.665 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
172 | 173 | 2.708861 | TCTAACAGGAGGAGGCACAAAA | 59.291 | 45.455 | 0.00 | 0.00 | 0.00 | 2.44 |
173 | 174 | 2.452600 | AACAGGAGGAGGCACAAAAA | 57.547 | 45.000 | 0.00 | 0.00 | 0.00 | 1.94 |
174 | 175 | 2.683211 | ACAGGAGGAGGCACAAAAAT | 57.317 | 45.000 | 0.00 | 0.00 | 0.00 | 1.82 |
175 | 176 | 2.962859 | ACAGGAGGAGGCACAAAAATT | 58.037 | 42.857 | 0.00 | 0.00 | 0.00 | 1.82 |
176 | 177 | 4.112634 | ACAGGAGGAGGCACAAAAATTA | 57.887 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
177 | 178 | 4.082125 | ACAGGAGGAGGCACAAAAATTAG | 58.918 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
178 | 179 | 4.082125 | CAGGAGGAGGCACAAAAATTAGT | 58.918 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
179 | 180 | 5.222048 | ACAGGAGGAGGCACAAAAATTAGTA | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
180 | 181 | 5.123979 | CAGGAGGAGGCACAAAAATTAGTAC | 59.876 | 44.000 | 0.00 | 0.00 | 0.00 | 2.73 |
181 | 182 | 4.094442 | GGAGGAGGCACAAAAATTAGTACG | 59.906 | 45.833 | 0.00 | 0.00 | 0.00 | 3.67 |
182 | 183 | 4.901868 | AGGAGGCACAAAAATTAGTACGA | 58.098 | 39.130 | 0.00 | 0.00 | 0.00 | 3.43 |
183 | 184 | 4.694037 | AGGAGGCACAAAAATTAGTACGAC | 59.306 | 41.667 | 0.00 | 0.00 | 0.00 | 4.34 |
184 | 185 | 4.142752 | GGAGGCACAAAAATTAGTACGACC | 60.143 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
185 | 186 | 4.648651 | AGGCACAAAAATTAGTACGACCT | 58.351 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
186 | 187 | 4.694037 | AGGCACAAAAATTAGTACGACCTC | 59.306 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
187 | 188 | 4.435121 | GGCACAAAAATTAGTACGACCTCG | 60.435 | 45.833 | 0.00 | 0.00 | 46.33 | 4.63 |
188 | 189 | 4.386652 | GCACAAAAATTAGTACGACCTCGA | 59.613 | 41.667 | 0.78 | 0.00 | 43.02 | 4.04 |
189 | 190 | 5.107375 | GCACAAAAATTAGTACGACCTCGAA | 60.107 | 40.000 | 0.78 | 0.00 | 43.02 | 3.71 |
190 | 191 | 6.401796 | GCACAAAAATTAGTACGACCTCGAAT | 60.402 | 38.462 | 0.78 | 0.00 | 43.02 | 3.34 |
191 | 192 | 7.201461 | GCACAAAAATTAGTACGACCTCGAATA | 60.201 | 37.037 | 0.78 | 0.00 | 43.02 | 1.75 |
192 | 193 | 8.649841 | CACAAAAATTAGTACGACCTCGAATAA | 58.350 | 33.333 | 0.78 | 0.00 | 43.02 | 1.40 |
193 | 194 | 9.206870 | ACAAAAATTAGTACGACCTCGAATAAA | 57.793 | 29.630 | 0.78 | 0.00 | 43.02 | 1.40 |
196 | 197 | 9.643693 | AAAATTAGTACGACCTCGAATAAAAGA | 57.356 | 29.630 | 0.78 | 0.00 | 43.02 | 2.52 |
197 | 198 | 9.643693 | AAATTAGTACGACCTCGAATAAAAGAA | 57.356 | 29.630 | 0.78 | 0.00 | 43.02 | 2.52 |
198 | 199 | 9.643693 | AATTAGTACGACCTCGAATAAAAGAAA | 57.356 | 29.630 | 0.78 | 0.00 | 43.02 | 2.52 |
199 | 200 | 9.643693 | ATTAGTACGACCTCGAATAAAAGAAAA | 57.356 | 29.630 | 0.78 | 0.00 | 43.02 | 2.29 |
200 | 201 | 7.951530 | AGTACGACCTCGAATAAAAGAAAAA | 57.048 | 32.000 | 0.78 | 0.00 | 43.02 | 1.94 |
201 | 202 | 8.543862 | AGTACGACCTCGAATAAAAGAAAAAT | 57.456 | 30.769 | 0.78 | 0.00 | 43.02 | 1.82 |
202 | 203 | 8.654215 | AGTACGACCTCGAATAAAAGAAAAATC | 58.346 | 33.333 | 0.78 | 0.00 | 43.02 | 2.17 |
203 | 204 | 7.668525 | ACGACCTCGAATAAAAGAAAAATCT | 57.331 | 32.000 | 0.78 | 0.00 | 43.02 | 2.40 |
204 | 205 | 8.095937 | ACGACCTCGAATAAAAGAAAAATCTT | 57.904 | 30.769 | 0.78 | 0.00 | 43.02 | 2.40 |
205 | 206 | 8.565416 | ACGACCTCGAATAAAAGAAAAATCTTT | 58.435 | 29.630 | 0.78 | 0.00 | 43.02 | 2.52 |
206 | 207 | 9.052080 | CGACCTCGAATAAAAGAAAAATCTTTC | 57.948 | 33.333 | 4.45 | 0.00 | 43.02 | 2.62 |
207 | 208 | 9.343103 | GACCTCGAATAAAAGAAAAATCTTTCC | 57.657 | 33.333 | 4.45 | 0.00 | 41.72 | 3.13 |
208 | 209 | 8.021396 | ACCTCGAATAAAAGAAAAATCTTTCCG | 58.979 | 33.333 | 4.45 | 6.64 | 41.72 | 4.30 |
209 | 210 | 7.484959 | CCTCGAATAAAAGAAAAATCTTTCCGG | 59.515 | 37.037 | 0.00 | 0.00 | 41.72 | 5.14 |
210 | 211 | 7.878036 | TCGAATAAAAGAAAAATCTTTCCGGT | 58.122 | 30.769 | 0.00 | 0.00 | 41.72 | 5.28 |
211 | 212 | 7.806014 | TCGAATAAAAGAAAAATCTTTCCGGTG | 59.194 | 33.333 | 0.00 | 0.00 | 41.72 | 4.94 |
212 | 213 | 7.806014 | CGAATAAAAGAAAAATCTTTCCGGTGA | 59.194 | 33.333 | 0.00 | 0.00 | 41.72 | 4.02 |
213 | 214 | 9.639601 | GAATAAAAGAAAAATCTTTCCGGTGAT | 57.360 | 29.630 | 0.00 | 1.17 | 41.72 | 3.06 |
214 | 215 | 8.986477 | ATAAAAGAAAAATCTTTCCGGTGATG | 57.014 | 30.769 | 0.00 | 0.00 | 41.72 | 3.07 |
215 | 216 | 6.648879 | AAAGAAAAATCTTTCCGGTGATGA | 57.351 | 33.333 | 0.00 | 0.00 | 41.72 | 2.92 |
216 | 217 | 6.648879 | AAGAAAAATCTTTCCGGTGATGAA | 57.351 | 33.333 | 0.00 | 0.00 | 41.72 | 2.57 |
217 | 218 | 6.013842 | AGAAAAATCTTTCCGGTGATGAAC | 57.986 | 37.500 | 0.00 | 0.00 | 41.72 | 3.18 |
218 | 219 | 4.419522 | AAAATCTTTCCGGTGATGAACG | 57.580 | 40.909 | 0.00 | 0.00 | 0.00 | 3.95 |
227 | 228 | 3.822594 | CGGTGATGAACGGATGAAAAA | 57.177 | 42.857 | 0.00 | 0.00 | 0.00 | 1.94 |
302 | 303 | 8.489990 | AGATATATCATGCCTCTTTTCATTCG | 57.510 | 34.615 | 15.08 | 0.00 | 0.00 | 3.34 |
309 | 310 | 5.607119 | TGCCTCTTTTCATTCGTAGAAAC | 57.393 | 39.130 | 0.00 | 0.00 | 45.90 | 2.78 |
316 | 317 | 9.716507 | CTCTTTTCATTCGTAGAAACAGAAAAA | 57.283 | 29.630 | 15.15 | 0.00 | 45.90 | 1.94 |
347 | 349 | 8.730680 | AGAAAATAAAATGACGTGTAGCTCAAT | 58.269 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
358 | 360 | 9.974980 | TGACGTGTAGCTCAATTATTATATGAA | 57.025 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
370 | 372 | 9.282247 | CAATTATTATATGAAAAGAGATGCCGC | 57.718 | 33.333 | 0.00 | 0.00 | 0.00 | 6.53 |
371 | 373 | 5.886960 | ATTATATGAAAAGAGATGCCGCC | 57.113 | 39.130 | 0.00 | 0.00 | 0.00 | 6.13 |
372 | 374 | 1.581934 | TATGAAAAGAGATGCCGCCG | 58.418 | 50.000 | 0.00 | 0.00 | 0.00 | 6.46 |
377 | 379 | 1.305930 | AAAGAGATGCCGCCGGTTTC | 61.306 | 55.000 | 4.45 | 1.78 | 0.00 | 2.78 |
388 | 390 | 2.677836 | CCGCCGGTTTCATATGATATGG | 59.322 | 50.000 | 12.17 | 9.20 | 0.00 | 2.74 |
528 | 541 | 8.573035 | ACTCTTTTCGTTCTAAAATAAATGCCA | 58.427 | 29.630 | 0.00 | 0.00 | 0.00 | 4.92 |
529 | 542 | 8.736751 | TCTTTTCGTTCTAAAATAAATGCCAC | 57.263 | 30.769 | 0.00 | 0.00 | 0.00 | 5.01 |
536 | 549 | 9.139174 | CGTTCTAAAATAAATGCCACTGATTTT | 57.861 | 29.630 | 0.00 | 0.00 | 34.83 | 1.82 |
669 | 3390 | 2.734492 | GCAATCCAGTCATTTCAGCAGC | 60.734 | 50.000 | 0.00 | 0.00 | 0.00 | 5.25 |
672 | 3393 | 1.093159 | CCAGTCATTTCAGCAGCTCC | 58.907 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
676 | 3397 | 0.543277 | TCATTTCAGCAGCTCCGGAT | 59.457 | 50.000 | 3.57 | 0.00 | 0.00 | 4.18 |
688 | 3409 | 0.676782 | CTCCGGATGTGGGTCAAACC | 60.677 | 60.000 | 3.57 | 0.00 | 37.60 | 3.27 |
784 | 3505 | 2.683933 | GGGAGTTCTCCGAGGCCA | 60.684 | 66.667 | 5.01 | 0.00 | 0.00 | 5.36 |
888 | 3610 | 4.250305 | GTCACGGGCCACACCACT | 62.250 | 66.667 | 4.39 | 0.00 | 42.05 | 4.00 |
892 | 3614 | 2.264794 | CGGGCCACACCACTACTC | 59.735 | 66.667 | 4.39 | 0.00 | 42.05 | 2.59 |
1089 | 3822 | 2.159000 | AGGTATCCGTTTCCCGAATGAC | 60.159 | 50.000 | 0.00 | 0.00 | 39.56 | 3.06 |
1093 | 3826 | 0.796312 | CCGTTTCCCGAATGACACTG | 59.204 | 55.000 | 0.00 | 0.00 | 39.56 | 3.66 |
1095 | 3828 | 1.606994 | CGTTTCCCGAATGACACTGGA | 60.607 | 52.381 | 0.00 | 0.00 | 39.56 | 3.86 |
1096 | 3829 | 2.711542 | GTTTCCCGAATGACACTGGAT | 58.288 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
1122 | 3861 | 0.175073 | GACCAGGGCGTATCGTCTTT | 59.825 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1123 | 3862 | 0.108329 | ACCAGGGCGTATCGTCTTTG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 2.77 |
1131 | 3870 | 3.492137 | GGCGTATCGTCTTTGTAGGGATT | 60.492 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
1132 | 3871 | 4.117685 | GCGTATCGTCTTTGTAGGGATTT | 58.882 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
1161 | 3900 | 4.643784 | TCTGGAACGGTACTAGGATTTCTC | 59.356 | 45.833 | 0.00 | 0.00 | 35.30 | 2.87 |
1193 | 3932 | 3.701542 | AGTATCATCTTCACAGGCTTCGA | 59.298 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
1194 | 3933 | 3.616956 | ATCATCTTCACAGGCTTCGAA | 57.383 | 42.857 | 0.00 | 0.00 | 0.00 | 3.71 |
1202 | 3941 | 2.166270 | CAGGCTTCGAAGTTCCTGC | 58.834 | 57.895 | 28.02 | 15.25 | 39.53 | 4.85 |
1236 | 3979 | 8.581057 | AGTCGATTGTATTTCTAAGCAGTATG | 57.419 | 34.615 | 0.00 | 0.00 | 40.87 | 2.39 |
1257 | 4000 | 1.879380 | TGATTGACCCTGCAAGAAACG | 59.121 | 47.619 | 0.00 | 0.00 | 34.07 | 3.60 |
1293 | 4036 | 6.837312 | TCTTGTTCTAGGATTGGACTTCAAA | 58.163 | 36.000 | 0.00 | 0.00 | 39.05 | 2.69 |
1301 | 4044 | 5.388654 | AGGATTGGACTTCAAATGTTCAGT | 58.611 | 37.500 | 0.00 | 0.00 | 39.05 | 3.41 |
1313 | 4056 | 7.687941 | TCAAATGTTCAGTTTCTAGATTCCC | 57.312 | 36.000 | 0.00 | 0.00 | 0.00 | 3.97 |
1323 | 4066 | 5.300792 | AGTTTCTAGATTCCCGCTCTCTTAG | 59.699 | 44.000 | 0.00 | 0.00 | 0.00 | 2.18 |
1327 | 4070 | 2.432510 | AGATTCCCGCTCTCTTAGTTGG | 59.567 | 50.000 | 0.00 | 0.00 | 0.00 | 3.77 |
1329 | 4072 | 0.895530 | TCCCGCTCTCTTAGTTGGTG | 59.104 | 55.000 | 0.00 | 0.00 | 0.00 | 4.17 |
1330 | 4073 | 0.741221 | CCCGCTCTCTTAGTTGGTGC | 60.741 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
1337 | 4080 | 5.423886 | GCTCTCTTAGTTGGTGCTTCTTAT | 58.576 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
1355 | 4098 | 6.509418 | TCTTATATGTTGTTTTGGTCAGCC | 57.491 | 37.500 | 0.00 | 0.00 | 0.00 | 4.85 |
1369 | 4113 | 2.229784 | GGTCAGCCTTCACCATTTTCTG | 59.770 | 50.000 | 0.00 | 0.00 | 32.33 | 3.02 |
1373 | 4117 | 3.508793 | CAGCCTTCACCATTTTCTGATGT | 59.491 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
1374 | 4118 | 4.021719 | CAGCCTTCACCATTTTCTGATGTT | 60.022 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
1375 | 4119 | 4.590222 | AGCCTTCACCATTTTCTGATGTTT | 59.410 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
1376 | 4120 | 5.774690 | AGCCTTCACCATTTTCTGATGTTTA | 59.225 | 36.000 | 0.00 | 0.00 | 0.00 | 2.01 |
1377 | 4121 | 6.438425 | AGCCTTCACCATTTTCTGATGTTTAT | 59.562 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
1379 | 4123 | 8.416329 | GCCTTCACCATTTTCTGATGTTTATAT | 58.584 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
1380 | 4124 | 9.956720 | CCTTCACCATTTTCTGATGTTTATATC | 57.043 | 33.333 | 0.00 | 0.00 | 0.00 | 1.63 |
1442 | 4204 | 5.518812 | TCATCCTTCGTTTTGTGACAAATG | 58.481 | 37.500 | 11.97 | 7.91 | 0.00 | 2.32 |
1509 | 4272 | 4.322567 | GTTTCACAGAGATTGAGAAGGCT | 58.677 | 43.478 | 0.00 | 0.00 | 37.61 | 4.58 |
1647 | 4410 | 1.134098 | TGCTTCTGGCCAGGTATTAGC | 60.134 | 52.381 | 32.23 | 27.53 | 40.92 | 3.09 |
1681 | 4444 | 4.636648 | ACGTACTTGGTGTTTTGAACATGA | 59.363 | 37.500 | 0.00 | 0.00 | 44.35 | 3.07 |
1945 | 4708 | 0.899019 | TGGTCGTGCAGCCAGTATTA | 59.101 | 50.000 | 0.00 | 0.00 | 0.00 | 0.98 |
1956 | 4719 | 6.261826 | GTGCAGCCAGTATTATTCTTCTCATT | 59.738 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
1999 | 4765 | 5.452078 | TTCAGAGTGCCGAAATCAATTTT | 57.548 | 34.783 | 0.00 | 0.00 | 0.00 | 1.82 |
2002 | 4768 | 5.471797 | TCAGAGTGCCGAAATCAATTTTGTA | 59.528 | 36.000 | 2.80 | 0.00 | 30.77 | 2.41 |
2048 | 4814 | 5.240844 | GTGCTTACACCACAAGGAACTTATT | 59.759 | 40.000 | 0.00 | 0.00 | 44.18 | 1.40 |
2050 | 4816 | 9.072981 | GTGCTTACACCACAAGGAACTTATTGT | 62.073 | 40.741 | 0.00 | 0.00 | 44.18 | 2.71 |
2250 | 5017 | 4.785511 | TTCCTCTTCTCGTCACTTTAGG | 57.214 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
2287 | 5054 | 2.481952 | AGAGTGCAGAAATCAACTTCGC | 59.518 | 45.455 | 0.00 | 0.00 | 0.00 | 4.70 |
2301 | 5068 | 4.335315 | TCAACTTCGCATTGTCTGAAAACT | 59.665 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
2359 | 5126 | 6.112734 | TGGATACTAGTTAATTGCCTGTGTG | 58.887 | 40.000 | 0.00 | 0.00 | 37.61 | 3.82 |
2386 | 5153 | 2.290323 | ACGGGGGCATCAATATTCTAGC | 60.290 | 50.000 | 0.00 | 0.00 | 0.00 | 3.42 |
2407 | 5174 | 1.476891 | GATCCTCCAGTACAACGCTCA | 59.523 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
2421 | 5188 | 3.678056 | ACGCTCAGTGATACTTTCCAA | 57.322 | 42.857 | 0.00 | 0.00 | 0.00 | 3.53 |
2429 | 5196 | 8.296713 | GCTCAGTGATACTTTCCAAAATTAACA | 58.703 | 33.333 | 0.00 | 0.00 | 0.00 | 2.41 |
2478 | 5245 | 7.876936 | ACTCTCCATAGTTAACGTGATTCTA | 57.123 | 36.000 | 13.48 | 0.00 | 0.00 | 2.10 |
2491 | 5258 | 4.572389 | ACGTGATTCTAACATCCAATGCTC | 59.428 | 41.667 | 0.00 | 0.00 | 0.00 | 4.26 |
2526 | 5293 | 1.583054 | AATTAACGCGATCCTCCTGC | 58.417 | 50.000 | 15.93 | 0.00 | 0.00 | 4.85 |
2535 | 5302 | 0.462759 | GATCCTCCTGCCCAAAGACG | 60.463 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2725 | 5502 | 5.357878 | GCTACACATGATTTTCCTTGGATCA | 59.642 | 40.000 | 0.00 | 0.00 | 34.61 | 2.92 |
2781 | 5558 | 1.221909 | TGGCTAGGGGAGAGGAGTGA | 61.222 | 60.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2972 | 5749 | 9.766277 | GAGTTTTCTTCTGCTATATTTCAGTTG | 57.234 | 33.333 | 4.49 | 0.94 | 0.00 | 3.16 |
3136 | 5913 | 4.298103 | ACTGCAATTGACTTCTCTGGAT | 57.702 | 40.909 | 10.34 | 0.00 | 0.00 | 3.41 |
3163 | 5940 | 9.252962 | CACTCATTTTATTTGGATAAATGCCTC | 57.747 | 33.333 | 0.00 | 0.00 | 37.52 | 4.70 |
3170 | 5947 | 3.312736 | TGGATAAATGCCTCCCCTTTC | 57.687 | 47.619 | 0.00 | 0.00 | 0.00 | 2.62 |
3437 | 6221 | 0.449388 | GAGAACTGCTGAATTGGCCG | 59.551 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
3490 | 6274 | 3.130516 | CGCCTTCTTCATGAGGTACTACA | 59.869 | 47.826 | 4.57 | 0.00 | 41.55 | 2.74 |
3523 | 6307 | 8.892723 | TGCTTATTCAGTATATTGAAGTGTTGG | 58.107 | 33.333 | 14.95 | 4.98 | 40.16 | 3.77 |
3605 | 6390 | 6.898189 | GTCACTTAACAACTACAAAAGTCACG | 59.102 | 38.462 | 0.00 | 0.00 | 37.50 | 4.35 |
3617 | 6402 | 2.568623 | AAGTCACGCCCATCTTCTTT | 57.431 | 45.000 | 0.00 | 0.00 | 0.00 | 2.52 |
3779 | 6568 | 2.298729 | TGGTGCTTTAATTCAGGTTGGC | 59.701 | 45.455 | 0.00 | 0.00 | 0.00 | 4.52 |
3890 | 6679 | 3.558321 | CCCGTCACTTTCCTGGTAAATCA | 60.558 | 47.826 | 0.00 | 0.00 | 0.00 | 2.57 |
4442 | 7254 | 4.101585 | TGCATCCTAGATGTCCCTACTTTG | 59.898 | 45.833 | 6.46 | 0.00 | 0.00 | 2.77 |
4586 | 7398 | 1.813178 | GCCTTTAACTCTTGGCCAGTC | 59.187 | 52.381 | 5.11 | 0.00 | 39.49 | 3.51 |
4647 | 7460 | 1.281287 | ACCAGAGCAGATGCACTTCAT | 59.719 | 47.619 | 7.68 | 0.00 | 45.16 | 2.57 |
4729 | 7545 | 5.610982 | ACCCCTAACCATCATGCTAAATAGA | 59.389 | 40.000 | 0.00 | 0.00 | 0.00 | 1.98 |
4805 | 7825 | 5.940192 | TGTGTGAGTCATTCAACCAATAC | 57.060 | 39.130 | 0.00 | 0.00 | 37.61 | 1.89 |
4865 | 7885 | 0.108585 | TTGTCCAAGTCCTGACTGCC | 59.891 | 55.000 | 0.00 | 0.00 | 41.58 | 4.85 |
4871 | 7891 | 2.477825 | CAAGTCCTGACTGCCGATATG | 58.522 | 52.381 | 0.00 | 0.00 | 41.58 | 1.78 |
4889 | 7909 | 8.234546 | GCCGATATGTTTTACTTTCTTTTCTCA | 58.765 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
4916 | 7936 | 9.674068 | TGCATACTTGGTCATAATTAAACTGTA | 57.326 | 29.630 | 0.00 | 0.00 | 0.00 | 2.74 |
4965 | 7985 | 6.482308 | ACTGGTTGTAACACTCTTGAACATAC | 59.518 | 38.462 | 0.00 | 0.00 | 0.00 | 2.39 |
5031 | 8054 | 4.761739 | TCAATTTTGACAGGCTTTCGAGAT | 59.238 | 37.500 | 0.00 | 0.00 | 31.01 | 2.75 |
5184 | 8207 | 3.572682 | CCGACTATATTGTCCCTGCTGTA | 59.427 | 47.826 | 11.04 | 0.00 | 33.70 | 2.74 |
5202 | 8225 | 1.762957 | GTACTGAGGGAGCTTGGCATA | 59.237 | 52.381 | 0.00 | 0.00 | 0.00 | 3.14 |
5217 | 8240 | 3.702330 | TGGCATACTGAAATACGAGTCG | 58.298 | 45.455 | 11.85 | 11.85 | 0.00 | 4.18 |
5220 | 8243 | 4.497674 | GGCATACTGAAATACGAGTCGAGT | 60.498 | 45.833 | 21.50 | 13.24 | 0.00 | 4.18 |
5421 | 8444 | 1.140312 | AGGTTCACCTGAGGCTTTCA | 58.860 | 50.000 | 0.00 | 0.00 | 46.55 | 2.69 |
5492 | 8516 | 0.387622 | CGGCTGCAGATTGGTGTTTG | 60.388 | 55.000 | 20.43 | 0.00 | 0.00 | 2.93 |
5563 | 8591 | 4.814234 | AGTTTACTTGAGTGCACGATCAAA | 59.186 | 37.500 | 18.74 | 10.34 | 35.14 | 2.69 |
5571 | 8599 | 6.682423 | TGAGTGCACGATCAAATTCATTAT | 57.318 | 33.333 | 12.01 | 0.00 | 0.00 | 1.28 |
5577 | 8605 | 9.071221 | GTGCACGATCAAATTCATTATGTTTAA | 57.929 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
5578 | 8606 | 9.071221 | TGCACGATCAAATTCATTATGTTTAAC | 57.929 | 29.630 | 0.00 | 0.00 | 0.00 | 2.01 |
5616 | 8644 | 3.213506 | AGCAAAGCAGTCAATGTGTGTA | 58.786 | 40.909 | 0.00 | 0.00 | 0.00 | 2.90 |
5642 | 8671 | 1.066858 | TGATTCAACTCGGGCTGACTC | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
5643 | 8672 | 0.250513 | ATTCAACTCGGGCTGACTCC | 59.749 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5766 | 8795 | 4.956700 | CACCCTCTCCATTTACTACTGAGA | 59.043 | 45.833 | 0.00 | 0.00 | 0.00 | 3.27 |
5974 | 9003 | 5.279384 | CGTCTATGTATTGTGGTGGTAGTC | 58.721 | 45.833 | 0.00 | 0.00 | 0.00 | 2.59 |
5988 | 9017 | 4.463050 | TGGTAGTCCCAAACCATCTTTT | 57.537 | 40.909 | 0.00 | 0.00 | 41.50 | 2.27 |
5989 | 9018 | 4.810345 | TGGTAGTCCCAAACCATCTTTTT | 58.190 | 39.130 | 0.00 | 0.00 | 41.50 | 1.94 |
5990 | 9019 | 4.586841 | TGGTAGTCCCAAACCATCTTTTTG | 59.413 | 41.667 | 0.00 | 0.00 | 41.50 | 2.44 |
5993 | 9022 | 5.692115 | AGTCCCAAACCATCTTTTTGTTT | 57.308 | 34.783 | 0.00 | 0.00 | 32.92 | 2.83 |
5994 | 9023 | 5.670485 | AGTCCCAAACCATCTTTTTGTTTC | 58.330 | 37.500 | 0.00 | 0.00 | 32.92 | 2.78 |
5995 | 9024 | 5.188751 | AGTCCCAAACCATCTTTTTGTTTCA | 59.811 | 36.000 | 0.00 | 0.00 | 32.92 | 2.69 |
5996 | 9025 | 6.054941 | GTCCCAAACCATCTTTTTGTTTCAT | 58.945 | 36.000 | 0.00 | 0.00 | 32.92 | 2.57 |
5997 | 9026 | 6.202762 | GTCCCAAACCATCTTTTTGTTTCATC | 59.797 | 38.462 | 0.00 | 0.00 | 32.92 | 2.92 |
5998 | 9027 | 5.469760 | CCCAAACCATCTTTTTGTTTCATCC | 59.530 | 40.000 | 0.00 | 0.00 | 32.92 | 3.51 |
5999 | 9028 | 6.054295 | CCAAACCATCTTTTTGTTTCATCCA | 58.946 | 36.000 | 0.00 | 0.00 | 32.92 | 3.41 |
6000 | 9029 | 6.541641 | CCAAACCATCTTTTTGTTTCATCCAA | 59.458 | 34.615 | 0.00 | 0.00 | 32.92 | 3.53 |
6001 | 9030 | 7.229106 | CCAAACCATCTTTTTGTTTCATCCAAT | 59.771 | 33.333 | 0.00 | 0.00 | 32.92 | 3.16 |
6002 | 9031 | 7.967890 | AACCATCTTTTTGTTTCATCCAATC | 57.032 | 32.000 | 0.00 | 0.00 | 0.00 | 2.67 |
6003 | 9032 | 7.307131 | ACCATCTTTTTGTTTCATCCAATCT | 57.693 | 32.000 | 0.00 | 0.00 | 0.00 | 2.40 |
6004 | 9033 | 8.421249 | ACCATCTTTTTGTTTCATCCAATCTA | 57.579 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
6005 | 9034 | 8.869109 | ACCATCTTTTTGTTTCATCCAATCTAA | 58.131 | 29.630 | 0.00 | 0.00 | 0.00 | 2.10 |
6006 | 9035 | 9.709495 | CCATCTTTTTGTTTCATCCAATCTAAA | 57.291 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
6066 | 9096 | 2.739379 | GGCTATCATTCTAGAAAGCGGC | 59.261 | 50.000 | 16.79 | 13.42 | 0.00 | 6.53 |
6084 | 9114 | 1.839894 | CCCAGGTTAGGGCATCTCC | 59.160 | 63.158 | 0.00 | 0.00 | 43.10 | 3.71 |
6094 | 9124 | 0.533755 | GGGCATCTCCAAGTCCATCG | 60.534 | 60.000 | 0.00 | 0.00 | 36.21 | 3.84 |
6107 | 9137 | 1.189524 | TCCATCGAAACGGACACCCT | 61.190 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
6108 | 9138 | 0.533491 | CCATCGAAACGGACACCCTA | 59.467 | 55.000 | 0.00 | 0.00 | 0.00 | 3.53 |
6109 | 9139 | 1.066716 | CCATCGAAACGGACACCCTAA | 60.067 | 52.381 | 0.00 | 0.00 | 0.00 | 2.69 |
6111 | 9141 | 2.153366 | TCGAAACGGACACCCTAAAC | 57.847 | 50.000 | 0.00 | 0.00 | 0.00 | 2.01 |
6112 | 9142 | 1.411977 | TCGAAACGGACACCCTAAACA | 59.588 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
6113 | 9143 | 2.037511 | TCGAAACGGACACCCTAAACAT | 59.962 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
6115 | 9145 | 3.364565 | CGAAACGGACACCCTAAACATTG | 60.365 | 47.826 | 0.00 | 0.00 | 0.00 | 2.82 |
6117 | 9147 | 1.422402 | ACGGACACCCTAAACATTGGT | 59.578 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
6185 | 9218 | 5.244402 | TCATCCAATCCCATACATCAAATGC | 59.756 | 40.000 | 0.00 | 0.00 | 0.00 | 3.56 |
6200 | 9233 | 0.620700 | AATGCCCGTCCTAGGTTCCT | 60.621 | 55.000 | 9.08 | 0.00 | 0.00 | 3.36 |
6286 | 9319 | 6.413526 | GCAATAACAATCAAAATGCGTCGATA | 59.586 | 34.615 | 0.00 | 0.00 | 0.00 | 2.92 |
6289 | 9322 | 9.515020 | AATAACAATCAAAATGCGTCGATATTT | 57.485 | 25.926 | 0.00 | 0.00 | 0.00 | 1.40 |
6338 | 9375 | 0.678950 | CCAAAAATTGCCAGTCCGGT | 59.321 | 50.000 | 0.00 | 0.00 | 36.97 | 5.28 |
6341 | 9378 | 0.678950 | AAAATTGCCAGTCCGGTTGG | 59.321 | 50.000 | 19.37 | 19.37 | 38.78 | 3.77 |
6367 | 9404 | 4.033709 | CAAACATCCTCCCTCTTCCTCTA | 58.966 | 47.826 | 0.00 | 0.00 | 0.00 | 2.43 |
6375 | 9412 | 1.762957 | CCCTCTTCCTCTATTTGCGGA | 59.237 | 52.381 | 0.00 | 0.00 | 0.00 | 5.54 |
6422 | 9468 | 0.320771 | CTTTGTGAGCGGCCACTACT | 60.321 | 55.000 | 18.07 | 0.00 | 37.89 | 2.57 |
6433 | 9479 | 2.348888 | CCACTACTCGCGGGTCCTT | 61.349 | 63.158 | 18.71 | 0.00 | 0.00 | 3.36 |
6478 | 9524 | 0.326264 | AACATCTCTGCCACCACCTC | 59.674 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
6482 | 9528 | 2.607750 | TCTGCCACCACCTCCTCC | 60.608 | 66.667 | 0.00 | 0.00 | 0.00 | 4.30 |
6531 | 9577 | 1.403679 | CAAAACGGGAACTCAAGTGCA | 59.596 | 47.619 | 0.00 | 0.00 | 0.00 | 4.57 |
6533 | 9579 | 2.851263 | AACGGGAACTCAAGTGCATA | 57.149 | 45.000 | 0.00 | 0.00 | 0.00 | 3.14 |
6579 | 9625 | 2.035783 | GGGAAAGGGCGGCTTTCT | 59.964 | 61.111 | 23.00 | 9.84 | 39.84 | 2.52 |
6588 | 9634 | 1.275471 | GGCGGCTTTCTTGCGAAAAC | 61.275 | 55.000 | 0.00 | 0.00 | 38.58 | 2.43 |
6598 | 9644 | 0.028770 | TTGCGAAAACAGTGCGGAAG | 59.971 | 50.000 | 0.00 | 0.00 | 31.89 | 3.46 |
6631 | 9677 | 0.179018 | AGGCTCCGTCTTGCTTTTGT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
6637 | 9683 | 1.021202 | CGTCTTGCTTTTGTGTGGGA | 58.979 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
6647 | 9693 | 1.576368 | TTGTGTGGGACAGGGGTGTT | 61.576 | 55.000 | 0.00 | 0.00 | 41.80 | 3.32 |
6654 | 9700 | 0.323451 | GGACAGGGGTGTTGGATTCC | 60.323 | 60.000 | 0.00 | 0.00 | 0.00 | 3.01 |
6685 | 9734 | 4.137543 | GGCTGTCCGGATATCAAATCTTT | 58.862 | 43.478 | 7.81 | 0.00 | 0.00 | 2.52 |
6707 | 9756 | 3.323751 | TTAGGTTTGCTTCGGTCTACC | 57.676 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
6708 | 9757 | 1.349067 | AGGTTTGCTTCGGTCTACCT | 58.651 | 50.000 | 0.00 | 0.00 | 0.00 | 3.08 |
6724 | 9773 | 1.686355 | ACCTGAATTTGGACGCACAA | 58.314 | 45.000 | 5.58 | 0.00 | 0.00 | 3.33 |
6727 | 9776 | 2.223688 | CCTGAATTTGGACGCACAAACA | 60.224 | 45.455 | 7.19 | 2.50 | 42.51 | 2.83 |
6732 | 9781 | 5.009110 | TGAATTTGGACGCACAAACAGATTA | 59.991 | 36.000 | 7.19 | 0.00 | 42.51 | 1.75 |
6733 | 9782 | 4.902443 | TTTGGACGCACAAACAGATTAA | 57.098 | 36.364 | 1.44 | 0.00 | 35.57 | 1.40 |
6734 | 9783 | 4.902443 | TTGGACGCACAAACAGATTAAA | 57.098 | 36.364 | 0.00 | 0.00 | 0.00 | 1.52 |
6740 | 9795 | 6.128117 | GGACGCACAAACAGATTAAAGGAATA | 60.128 | 38.462 | 0.00 | 0.00 | 0.00 | 1.75 |
6744 | 9799 | 7.360861 | CGCACAAACAGATTAAAGGAATAGACA | 60.361 | 37.037 | 0.00 | 0.00 | 0.00 | 3.41 |
6755 | 9810 | 1.666189 | GGAATAGACAGCGTTGAAGGC | 59.334 | 52.381 | 6.16 | 0.94 | 0.00 | 4.35 |
6757 | 9812 | 0.905357 | ATAGACAGCGTTGAAGGCCT | 59.095 | 50.000 | 6.16 | 0.00 | 0.00 | 5.19 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 2.029844 | GGACTTCGCACCTGACAGC | 61.030 | 63.158 | 0.00 | 0.00 | 0.00 | 4.40 |
1 | 2 | 0.389166 | GAGGACTTCGCACCTGACAG | 60.389 | 60.000 | 0.00 | 0.00 | 36.57 | 3.51 |
2 | 3 | 0.827925 | AGAGGACTTCGCACCTGACA | 60.828 | 55.000 | 0.00 | 0.00 | 36.57 | 3.58 |
3 | 4 | 0.109039 | GAGAGGACTTCGCACCTGAC | 60.109 | 60.000 | 0.00 | 0.00 | 36.57 | 3.51 |
4 | 5 | 0.251386 | AGAGAGGACTTCGCACCTGA | 60.251 | 55.000 | 0.00 | 0.00 | 36.57 | 3.86 |
5 | 6 | 1.464734 | TAGAGAGGACTTCGCACCTG | 58.535 | 55.000 | 0.00 | 0.00 | 36.57 | 4.00 |
6 | 7 | 2.445682 | ATAGAGAGGACTTCGCACCT | 57.554 | 50.000 | 0.00 | 0.00 | 39.41 | 4.00 |
7 | 8 | 3.570550 | ACATATAGAGAGGACTTCGCACC | 59.429 | 47.826 | 0.00 | 0.00 | 0.00 | 5.01 |
8 | 9 | 4.839668 | ACATATAGAGAGGACTTCGCAC | 57.160 | 45.455 | 0.00 | 0.00 | 0.00 | 5.34 |
9 | 10 | 5.826208 | TGTAACATATAGAGAGGACTTCGCA | 59.174 | 40.000 | 0.00 | 0.00 | 0.00 | 5.10 |
10 | 11 | 6.016943 | AGTGTAACATATAGAGAGGACTTCGC | 60.017 | 42.308 | 0.00 | 0.00 | 41.43 | 4.70 |
11 | 12 | 7.012515 | ACAGTGTAACATATAGAGAGGACTTCG | 59.987 | 40.741 | 0.00 | 0.00 | 41.43 | 3.79 |
12 | 13 | 8.132362 | CACAGTGTAACATATAGAGAGGACTTC | 58.868 | 40.741 | 0.00 | 0.00 | 41.43 | 3.01 |
13 | 14 | 7.416890 | GCACAGTGTAACATATAGAGAGGACTT | 60.417 | 40.741 | 1.61 | 0.00 | 41.43 | 3.01 |
14 | 15 | 6.039941 | GCACAGTGTAACATATAGAGAGGACT | 59.960 | 42.308 | 1.61 | 0.00 | 41.43 | 3.85 |
15 | 16 | 6.183360 | TGCACAGTGTAACATATAGAGAGGAC | 60.183 | 42.308 | 1.61 | 0.00 | 41.43 | 3.85 |
16 | 17 | 5.891551 | TGCACAGTGTAACATATAGAGAGGA | 59.108 | 40.000 | 1.61 | 0.00 | 41.43 | 3.71 |
17 | 18 | 6.149129 | TGCACAGTGTAACATATAGAGAGG | 57.851 | 41.667 | 1.61 | 0.00 | 41.43 | 3.69 |
18 | 19 | 5.689514 | GCTGCACAGTGTAACATATAGAGAG | 59.310 | 44.000 | 1.61 | 0.00 | 41.43 | 3.20 |
19 | 20 | 5.127031 | TGCTGCACAGTGTAACATATAGAGA | 59.873 | 40.000 | 0.00 | 0.00 | 41.43 | 3.10 |
20 | 21 | 5.351458 | TGCTGCACAGTGTAACATATAGAG | 58.649 | 41.667 | 0.00 | 0.00 | 41.43 | 2.43 |
21 | 22 | 5.337578 | TGCTGCACAGTGTAACATATAGA | 57.662 | 39.130 | 0.00 | 0.00 | 41.43 | 1.98 |
22 | 23 | 6.421377 | TTTGCTGCACAGTGTAACATATAG | 57.579 | 37.500 | 0.00 | 0.00 | 41.43 | 1.31 |
23 | 24 | 7.226523 | CCTATTTGCTGCACAGTGTAACATATA | 59.773 | 37.037 | 0.00 | 4.09 | 41.43 | 0.86 |
24 | 25 | 5.902613 | ATTTGCTGCACAGTGTAACATAT | 57.097 | 34.783 | 0.00 | 0.00 | 41.43 | 1.78 |
25 | 26 | 5.353956 | CCTATTTGCTGCACAGTGTAACATA | 59.646 | 40.000 | 0.00 | 0.00 | 41.43 | 2.29 |
26 | 27 | 4.156556 | CCTATTTGCTGCACAGTGTAACAT | 59.843 | 41.667 | 0.00 | 0.00 | 41.43 | 2.71 |
27 | 28 | 3.501828 | CCTATTTGCTGCACAGTGTAACA | 59.498 | 43.478 | 0.00 | 0.00 | 41.43 | 2.41 |
28 | 29 | 3.751175 | TCCTATTTGCTGCACAGTGTAAC | 59.249 | 43.478 | 0.00 | 0.00 | 0.00 | 2.50 |
29 | 30 | 4.014569 | TCCTATTTGCTGCACAGTGTAA | 57.985 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
30 | 31 | 3.694043 | TCCTATTTGCTGCACAGTGTA | 57.306 | 42.857 | 0.00 | 0.00 | 0.00 | 2.90 |
31 | 32 | 2.566833 | TCCTATTTGCTGCACAGTGT | 57.433 | 45.000 | 0.00 | 0.00 | 0.00 | 3.55 |
32 | 33 | 4.445452 | AAATCCTATTTGCTGCACAGTG | 57.555 | 40.909 | 0.00 | 0.00 | 0.00 | 3.66 |
33 | 34 | 5.105756 | GGTAAAATCCTATTTGCTGCACAGT | 60.106 | 40.000 | 0.00 | 0.00 | 0.00 | 3.55 |
34 | 35 | 5.343249 | GGTAAAATCCTATTTGCTGCACAG | 58.657 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
35 | 36 | 4.159506 | GGGTAAAATCCTATTTGCTGCACA | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 4.57 |
36 | 37 | 4.159506 | TGGGTAAAATCCTATTTGCTGCAC | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 4.57 |
37 | 38 | 4.159506 | GTGGGTAAAATCCTATTTGCTGCA | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 4.41 |
38 | 39 | 4.441495 | GGTGGGTAAAATCCTATTTGCTGC | 60.441 | 45.833 | 0.00 | 0.00 | 0.00 | 5.25 |
39 | 40 | 4.709397 | TGGTGGGTAAAATCCTATTTGCTG | 59.291 | 41.667 | 0.00 | 0.00 | 0.00 | 4.41 |
40 | 41 | 4.709886 | GTGGTGGGTAAAATCCTATTTGCT | 59.290 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
41 | 42 | 4.439563 | CGTGGTGGGTAAAATCCTATTTGC | 60.440 | 45.833 | 0.00 | 0.00 | 0.00 | 3.68 |
42 | 43 | 4.703093 | ACGTGGTGGGTAAAATCCTATTTG | 59.297 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
43 | 44 | 4.703093 | CACGTGGTGGGTAAAATCCTATTT | 59.297 | 41.667 | 7.95 | 0.00 | 0.00 | 1.40 |
44 | 45 | 4.266714 | CACGTGGTGGGTAAAATCCTATT | 58.733 | 43.478 | 7.95 | 0.00 | 0.00 | 1.73 |
45 | 46 | 3.881220 | CACGTGGTGGGTAAAATCCTAT | 58.119 | 45.455 | 7.95 | 0.00 | 0.00 | 2.57 |
46 | 47 | 3.337694 | CACGTGGTGGGTAAAATCCTA | 57.662 | 47.619 | 7.95 | 0.00 | 0.00 | 2.94 |
47 | 48 | 2.194201 | CACGTGGTGGGTAAAATCCT | 57.806 | 50.000 | 7.95 | 0.00 | 0.00 | 3.24 |
58 | 59 | 1.243902 | AATTTACTGCCCACGTGGTG | 58.756 | 50.000 | 31.80 | 23.37 | 36.04 | 4.17 |
59 | 60 | 2.863132 | TAATTTACTGCCCACGTGGT | 57.137 | 45.000 | 31.80 | 16.80 | 36.04 | 4.16 |
60 | 61 | 3.078837 | ACTTAATTTACTGCCCACGTGG | 58.921 | 45.455 | 28.26 | 28.26 | 37.09 | 4.94 |
61 | 62 | 3.119990 | CCACTTAATTTACTGCCCACGTG | 60.120 | 47.826 | 9.08 | 9.08 | 0.00 | 4.49 |
62 | 63 | 3.078837 | CCACTTAATTTACTGCCCACGT | 58.921 | 45.455 | 0.00 | 0.00 | 0.00 | 4.49 |
63 | 64 | 2.422127 | CCCACTTAATTTACTGCCCACG | 59.578 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
64 | 65 | 2.165641 | GCCCACTTAATTTACTGCCCAC | 59.834 | 50.000 | 0.00 | 0.00 | 0.00 | 4.61 |
65 | 66 | 2.042433 | AGCCCACTTAATTTACTGCCCA | 59.958 | 45.455 | 0.00 | 0.00 | 0.00 | 5.36 |
66 | 67 | 2.427095 | CAGCCCACTTAATTTACTGCCC | 59.573 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
67 | 68 | 2.427095 | CCAGCCCACTTAATTTACTGCC | 59.573 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
68 | 69 | 2.159240 | GCCAGCCCACTTAATTTACTGC | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
69 | 70 | 3.356290 | AGCCAGCCCACTTAATTTACTG | 58.644 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
70 | 71 | 3.739401 | AGCCAGCCCACTTAATTTACT | 57.261 | 42.857 | 0.00 | 0.00 | 0.00 | 2.24 |
71 | 72 | 3.761752 | TGAAGCCAGCCCACTTAATTTAC | 59.238 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
72 | 73 | 3.761752 | GTGAAGCCAGCCCACTTAATTTA | 59.238 | 43.478 | 5.76 | 0.00 | 0.00 | 1.40 |
73 | 74 | 2.562738 | GTGAAGCCAGCCCACTTAATTT | 59.437 | 45.455 | 5.76 | 0.00 | 0.00 | 1.82 |
74 | 75 | 2.171003 | GTGAAGCCAGCCCACTTAATT | 58.829 | 47.619 | 5.76 | 0.00 | 0.00 | 1.40 |
75 | 76 | 1.355720 | AGTGAAGCCAGCCCACTTAAT | 59.644 | 47.619 | 8.84 | 0.00 | 37.86 | 1.40 |
76 | 77 | 0.771127 | AGTGAAGCCAGCCCACTTAA | 59.229 | 50.000 | 8.84 | 0.00 | 37.86 | 1.85 |
77 | 78 | 0.036732 | CAGTGAAGCCAGCCCACTTA | 59.963 | 55.000 | 11.21 | 0.00 | 38.93 | 2.24 |
78 | 79 | 1.228367 | CAGTGAAGCCAGCCCACTT | 60.228 | 57.895 | 11.21 | 0.00 | 38.93 | 3.16 |
79 | 80 | 2.433446 | CAGTGAAGCCAGCCCACT | 59.567 | 61.111 | 8.84 | 8.84 | 41.35 | 4.00 |
80 | 81 | 2.674380 | CCAGTGAAGCCAGCCCAC | 60.674 | 66.667 | 0.00 | 5.04 | 0.00 | 4.61 |
81 | 82 | 3.970410 | CCCAGTGAAGCCAGCCCA | 61.970 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
82 | 83 | 3.927481 | GACCCAGTGAAGCCAGCCC | 62.927 | 68.421 | 0.00 | 0.00 | 0.00 | 5.19 |
83 | 84 | 2.360475 | GACCCAGTGAAGCCAGCC | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
84 | 85 | 1.673665 | CTGACCCAGTGAAGCCAGC | 60.674 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
85 | 86 | 0.036577 | CTCTGACCCAGTGAAGCCAG | 60.037 | 60.000 | 0.00 | 0.00 | 32.61 | 4.85 |
86 | 87 | 2.061220 | CTCTGACCCAGTGAAGCCA | 58.939 | 57.895 | 0.00 | 0.00 | 32.61 | 4.75 |
87 | 88 | 1.376553 | GCTCTGACCCAGTGAAGCC | 60.377 | 63.158 | 0.00 | 0.00 | 32.61 | 4.35 |
88 | 89 | 1.739562 | CGCTCTGACCCAGTGAAGC | 60.740 | 63.158 | 0.00 | 0.00 | 32.61 | 3.86 |
89 | 90 | 1.739562 | GCGCTCTGACCCAGTGAAG | 60.740 | 63.158 | 0.00 | 0.00 | 32.61 | 3.02 |
90 | 91 | 2.343758 | GCGCTCTGACCCAGTGAA | 59.656 | 61.111 | 0.00 | 0.00 | 32.61 | 3.18 |
91 | 92 | 4.056125 | CGCGCTCTGACCCAGTGA | 62.056 | 66.667 | 5.56 | 0.00 | 32.61 | 3.41 |
92 | 93 | 4.363990 | ACGCGCTCTGACCCAGTG | 62.364 | 66.667 | 5.73 | 0.00 | 32.61 | 3.66 |
93 | 94 | 4.363990 | CACGCGCTCTGACCCAGT | 62.364 | 66.667 | 5.73 | 0.00 | 32.61 | 4.00 |
94 | 95 | 4.363990 | ACACGCGCTCTGACCCAG | 62.364 | 66.667 | 5.73 | 0.00 | 0.00 | 4.45 |
95 | 96 | 4.662961 | CACACGCGCTCTGACCCA | 62.663 | 66.667 | 5.73 | 0.00 | 0.00 | 4.51 |
105 | 106 | 2.307309 | CGTATATGGGCCACACGCG | 61.307 | 63.158 | 19.94 | 3.53 | 38.94 | 6.01 |
106 | 107 | 0.531090 | TTCGTATATGGGCCACACGC | 60.531 | 55.000 | 24.50 | 10.16 | 32.85 | 5.34 |
107 | 108 | 1.942677 | TTTCGTATATGGGCCACACG | 58.057 | 50.000 | 23.74 | 23.74 | 0.00 | 4.49 |
108 | 109 | 4.024048 | CAGAATTTCGTATATGGGCCACAC | 60.024 | 45.833 | 9.28 | 6.52 | 0.00 | 3.82 |
109 | 110 | 4.133820 | CAGAATTTCGTATATGGGCCACA | 58.866 | 43.478 | 9.28 | 0.00 | 0.00 | 4.17 |
110 | 111 | 4.385825 | TCAGAATTTCGTATATGGGCCAC | 58.614 | 43.478 | 9.28 | 0.00 | 0.00 | 5.01 |
111 | 112 | 4.698201 | TCAGAATTTCGTATATGGGCCA | 57.302 | 40.909 | 9.61 | 9.61 | 0.00 | 5.36 |
112 | 113 | 4.819630 | TGTTCAGAATTTCGTATATGGGCC | 59.180 | 41.667 | 0.00 | 0.00 | 0.00 | 5.80 |
113 | 114 | 6.371809 | TTGTTCAGAATTTCGTATATGGGC | 57.628 | 37.500 | 0.00 | 0.00 | 0.00 | 5.36 |
114 | 115 | 7.148154 | TGGTTTGTTCAGAATTTCGTATATGGG | 60.148 | 37.037 | 0.00 | 0.00 | 0.00 | 4.00 |
115 | 116 | 7.757526 | TGGTTTGTTCAGAATTTCGTATATGG | 58.242 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
116 | 117 | 9.787532 | AATGGTTTGTTCAGAATTTCGTATATG | 57.212 | 29.630 | 0.00 | 0.00 | 0.00 | 1.78 |
121 | 122 | 9.191995 | GAAATAATGGTTTGTTCAGAATTTCGT | 57.808 | 29.630 | 0.00 | 0.00 | 0.00 | 3.85 |
122 | 123 | 9.410556 | AGAAATAATGGTTTGTTCAGAATTTCG | 57.589 | 29.630 | 0.00 | 0.00 | 36.00 | 3.46 |
133 | 134 | 9.981114 | CCTGTTAGAAAAGAAATAATGGTTTGT | 57.019 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
136 | 137 | 9.025041 | CCTCCTGTTAGAAAAGAAATAATGGTT | 57.975 | 33.333 | 0.00 | 0.00 | 0.00 | 3.67 |
137 | 138 | 8.390921 | TCCTCCTGTTAGAAAAGAAATAATGGT | 58.609 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
138 | 139 | 8.807948 | TCCTCCTGTTAGAAAAGAAATAATGG | 57.192 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
139 | 140 | 8.897752 | CCTCCTCCTGTTAGAAAAGAAATAATG | 58.102 | 37.037 | 0.00 | 0.00 | 0.00 | 1.90 |
140 | 141 | 7.558081 | GCCTCCTCCTGTTAGAAAAGAAATAAT | 59.442 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
141 | 142 | 6.884836 | GCCTCCTCCTGTTAGAAAAGAAATAA | 59.115 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
142 | 143 | 6.012858 | TGCCTCCTCCTGTTAGAAAAGAAATA | 60.013 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
143 | 144 | 5.222130 | TGCCTCCTCCTGTTAGAAAAGAAAT | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 2.17 |
144 | 145 | 4.104102 | TGCCTCCTCCTGTTAGAAAAGAAA | 59.896 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
145 | 146 | 3.650942 | TGCCTCCTCCTGTTAGAAAAGAA | 59.349 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
146 | 147 | 3.008049 | GTGCCTCCTCCTGTTAGAAAAGA | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 2.52 |
147 | 148 | 3.244561 | TGTGCCTCCTCCTGTTAGAAAAG | 60.245 | 47.826 | 0.00 | 0.00 | 0.00 | 2.27 |
148 | 149 | 2.708861 | TGTGCCTCCTCCTGTTAGAAAA | 59.291 | 45.455 | 0.00 | 0.00 | 0.00 | 2.29 |
149 | 150 | 2.334977 | TGTGCCTCCTCCTGTTAGAAA | 58.665 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
150 | 151 | 2.024176 | TGTGCCTCCTCCTGTTAGAA | 57.976 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
151 | 152 | 2.024176 | TTGTGCCTCCTCCTGTTAGA | 57.976 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
152 | 153 | 2.859165 | TTTGTGCCTCCTCCTGTTAG | 57.141 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
153 | 154 | 3.586470 | TTTTTGTGCCTCCTCCTGTTA | 57.414 | 42.857 | 0.00 | 0.00 | 0.00 | 2.41 |
154 | 155 | 2.452600 | TTTTTGTGCCTCCTCCTGTT | 57.547 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
155 | 156 | 2.683211 | ATTTTTGTGCCTCCTCCTGT | 57.317 | 45.000 | 0.00 | 0.00 | 0.00 | 4.00 |
156 | 157 | 4.082125 | ACTAATTTTTGTGCCTCCTCCTG | 58.918 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
157 | 158 | 4.388577 | ACTAATTTTTGTGCCTCCTCCT | 57.611 | 40.909 | 0.00 | 0.00 | 0.00 | 3.69 |
158 | 159 | 4.094442 | CGTACTAATTTTTGTGCCTCCTCC | 59.906 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
159 | 160 | 4.933400 | TCGTACTAATTTTTGTGCCTCCTC | 59.067 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
160 | 161 | 4.694037 | GTCGTACTAATTTTTGTGCCTCCT | 59.306 | 41.667 | 0.00 | 0.00 | 0.00 | 3.69 |
161 | 162 | 4.142752 | GGTCGTACTAATTTTTGTGCCTCC | 60.143 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
162 | 163 | 4.694037 | AGGTCGTACTAATTTTTGTGCCTC | 59.306 | 41.667 | 0.00 | 0.00 | 0.00 | 4.70 |
163 | 164 | 4.648651 | AGGTCGTACTAATTTTTGTGCCT | 58.351 | 39.130 | 0.00 | 0.00 | 0.00 | 4.75 |
164 | 165 | 4.435121 | CGAGGTCGTACTAATTTTTGTGCC | 60.435 | 45.833 | 0.00 | 0.00 | 34.11 | 5.01 |
165 | 166 | 4.386652 | TCGAGGTCGTACTAATTTTTGTGC | 59.613 | 41.667 | 0.00 | 0.00 | 40.80 | 4.57 |
166 | 167 | 6.456447 | TTCGAGGTCGTACTAATTTTTGTG | 57.544 | 37.500 | 0.00 | 0.00 | 40.80 | 3.33 |
167 | 168 | 8.761575 | TTATTCGAGGTCGTACTAATTTTTGT | 57.238 | 30.769 | 0.00 | 0.00 | 40.80 | 2.83 |
170 | 171 | 9.643693 | TCTTTTATTCGAGGTCGTACTAATTTT | 57.356 | 29.630 | 0.00 | 0.00 | 40.80 | 1.82 |
171 | 172 | 9.643693 | TTCTTTTATTCGAGGTCGTACTAATTT | 57.356 | 29.630 | 0.00 | 0.00 | 40.80 | 1.82 |
172 | 173 | 9.643693 | TTTCTTTTATTCGAGGTCGTACTAATT | 57.356 | 29.630 | 0.00 | 0.00 | 40.80 | 1.40 |
173 | 174 | 9.643693 | TTTTCTTTTATTCGAGGTCGTACTAAT | 57.356 | 29.630 | 0.00 | 0.00 | 40.80 | 1.73 |
174 | 175 | 9.474920 | TTTTTCTTTTATTCGAGGTCGTACTAA | 57.525 | 29.630 | 0.00 | 0.00 | 40.80 | 2.24 |
175 | 176 | 9.643693 | ATTTTTCTTTTATTCGAGGTCGTACTA | 57.356 | 29.630 | 0.00 | 0.00 | 40.80 | 1.82 |
176 | 177 | 7.951530 | TTTTTCTTTTATTCGAGGTCGTACT | 57.048 | 32.000 | 0.00 | 0.00 | 40.80 | 2.73 |
177 | 178 | 8.654215 | AGATTTTTCTTTTATTCGAGGTCGTAC | 58.346 | 33.333 | 0.00 | 0.00 | 40.80 | 3.67 |
178 | 179 | 8.767478 | AGATTTTTCTTTTATTCGAGGTCGTA | 57.233 | 30.769 | 0.00 | 0.00 | 40.80 | 3.43 |
179 | 180 | 7.668525 | AGATTTTTCTTTTATTCGAGGTCGT | 57.331 | 32.000 | 0.00 | 0.00 | 40.80 | 4.34 |
180 | 181 | 8.950403 | AAAGATTTTTCTTTTATTCGAGGTCG | 57.050 | 30.769 | 0.00 | 0.00 | 36.64 | 4.79 |
181 | 182 | 9.343103 | GGAAAGATTTTTCTTTTATTCGAGGTC | 57.657 | 33.333 | 8.47 | 0.00 | 41.92 | 3.85 |
182 | 183 | 8.021396 | CGGAAAGATTTTTCTTTTATTCGAGGT | 58.979 | 33.333 | 8.47 | 0.00 | 41.92 | 3.85 |
183 | 184 | 7.484959 | CCGGAAAGATTTTTCTTTTATTCGAGG | 59.515 | 37.037 | 0.00 | 0.00 | 41.92 | 4.63 |
184 | 185 | 8.021396 | ACCGGAAAGATTTTTCTTTTATTCGAG | 58.979 | 33.333 | 9.46 | 0.72 | 41.92 | 4.04 |
185 | 186 | 7.806014 | CACCGGAAAGATTTTTCTTTTATTCGA | 59.194 | 33.333 | 9.46 | 0.00 | 41.92 | 3.71 |
186 | 187 | 7.806014 | TCACCGGAAAGATTTTTCTTTTATTCG | 59.194 | 33.333 | 9.46 | 2.43 | 41.92 | 3.34 |
187 | 188 | 9.639601 | ATCACCGGAAAGATTTTTCTTTTATTC | 57.360 | 29.630 | 9.46 | 0.00 | 41.92 | 1.75 |
188 | 189 | 9.423061 | CATCACCGGAAAGATTTTTCTTTTATT | 57.577 | 29.630 | 9.46 | 0.00 | 41.92 | 1.40 |
189 | 190 | 8.802267 | TCATCACCGGAAAGATTTTTCTTTTAT | 58.198 | 29.630 | 9.46 | 0.00 | 41.92 | 1.40 |
190 | 191 | 8.172352 | TCATCACCGGAAAGATTTTTCTTTTA | 57.828 | 30.769 | 9.46 | 0.00 | 41.92 | 1.52 |
191 | 192 | 7.049799 | TCATCACCGGAAAGATTTTTCTTTT | 57.950 | 32.000 | 9.46 | 0.00 | 41.92 | 2.27 |
192 | 193 | 6.648879 | TCATCACCGGAAAGATTTTTCTTT | 57.351 | 33.333 | 9.46 | 0.80 | 41.92 | 2.52 |
193 | 194 | 6.447162 | GTTCATCACCGGAAAGATTTTTCTT | 58.553 | 36.000 | 9.46 | 0.00 | 41.92 | 2.52 |
194 | 195 | 5.334879 | CGTTCATCACCGGAAAGATTTTTCT | 60.335 | 40.000 | 9.46 | 0.00 | 41.92 | 2.52 |
195 | 196 | 4.851558 | CGTTCATCACCGGAAAGATTTTTC | 59.148 | 41.667 | 9.46 | 0.06 | 41.59 | 2.29 |
196 | 197 | 4.794169 | CGTTCATCACCGGAAAGATTTTT | 58.206 | 39.130 | 9.46 | 0.00 | 0.00 | 1.94 |
197 | 198 | 4.419522 | CGTTCATCACCGGAAAGATTTT | 57.580 | 40.909 | 9.46 | 0.00 | 0.00 | 1.82 |
206 | 207 | 1.732941 | TTTCATCCGTTCATCACCGG | 58.267 | 50.000 | 0.00 | 0.00 | 45.55 | 5.28 |
207 | 208 | 3.822594 | TTTTTCATCCGTTCATCACCG | 57.177 | 42.857 | 0.00 | 0.00 | 0.00 | 4.94 |
276 | 277 | 9.591792 | CGAATGAAAAGAGGCATGATATATCTA | 57.408 | 33.333 | 13.79 | 1.35 | 0.00 | 1.98 |
277 | 278 | 8.099537 | ACGAATGAAAAGAGGCATGATATATCT | 58.900 | 33.333 | 13.79 | 0.00 | 0.00 | 1.98 |
278 | 279 | 8.261492 | ACGAATGAAAAGAGGCATGATATATC | 57.739 | 34.615 | 5.73 | 5.73 | 0.00 | 1.63 |
279 | 280 | 9.376075 | CTACGAATGAAAAGAGGCATGATATAT | 57.624 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
280 | 281 | 8.585018 | TCTACGAATGAAAAGAGGCATGATATA | 58.415 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
281 | 282 | 7.445121 | TCTACGAATGAAAAGAGGCATGATAT | 58.555 | 34.615 | 0.00 | 0.00 | 0.00 | 1.63 |
282 | 283 | 6.816136 | TCTACGAATGAAAAGAGGCATGATA | 58.184 | 36.000 | 0.00 | 0.00 | 0.00 | 2.15 |
283 | 284 | 5.674525 | TCTACGAATGAAAAGAGGCATGAT | 58.325 | 37.500 | 0.00 | 0.00 | 0.00 | 2.45 |
284 | 285 | 5.084818 | TCTACGAATGAAAAGAGGCATGA | 57.915 | 39.130 | 0.00 | 0.00 | 0.00 | 3.07 |
285 | 286 | 5.801350 | TTCTACGAATGAAAAGAGGCATG | 57.199 | 39.130 | 0.00 | 0.00 | 0.00 | 4.06 |
286 | 287 | 5.705441 | TGTTTCTACGAATGAAAAGAGGCAT | 59.295 | 36.000 | 0.00 | 0.00 | 35.54 | 4.40 |
287 | 288 | 5.060506 | TGTTTCTACGAATGAAAAGAGGCA | 58.939 | 37.500 | 0.00 | 0.00 | 35.54 | 4.75 |
288 | 289 | 5.408604 | TCTGTTTCTACGAATGAAAAGAGGC | 59.591 | 40.000 | 0.00 | 0.00 | 35.54 | 4.70 |
289 | 290 | 7.421530 | TTCTGTTTCTACGAATGAAAAGAGG | 57.578 | 36.000 | 0.00 | 0.00 | 35.54 | 3.69 |
290 | 291 | 9.716507 | TTTTTCTGTTTCTACGAATGAAAAGAG | 57.283 | 29.630 | 0.00 | 0.00 | 35.54 | 2.85 |
347 | 349 | 6.092122 | CGGCGGCATCTCTTTTCATATAATAA | 59.908 | 38.462 | 10.53 | 0.00 | 0.00 | 1.40 |
349 | 351 | 4.393062 | CGGCGGCATCTCTTTTCATATAAT | 59.607 | 41.667 | 10.53 | 0.00 | 0.00 | 1.28 |
350 | 352 | 3.745975 | CGGCGGCATCTCTTTTCATATAA | 59.254 | 43.478 | 10.53 | 0.00 | 0.00 | 0.98 |
352 | 354 | 2.146342 | CGGCGGCATCTCTTTTCATAT | 58.854 | 47.619 | 10.53 | 0.00 | 0.00 | 1.78 |
358 | 360 | 1.303317 | AAACCGGCGGCATCTCTTT | 60.303 | 52.632 | 28.71 | 15.13 | 0.00 | 2.52 |
364 | 366 | 0.179032 | TCATATGAAACCGGCGGCAT | 60.179 | 50.000 | 28.71 | 22.90 | 0.00 | 4.40 |
367 | 369 | 2.677836 | CCATATCATATGAAACCGGCGG | 59.322 | 50.000 | 27.06 | 27.06 | 0.00 | 6.13 |
370 | 372 | 7.885297 | ACAAAATCCATATCATATGAAACCGG | 58.115 | 34.615 | 9.99 | 0.00 | 0.00 | 5.28 |
502 | 515 | 8.573035 | TGGCATTTATTTTAGAACGAAAAGAGT | 58.427 | 29.630 | 0.00 | 0.00 | 32.06 | 3.24 |
503 | 516 | 8.850452 | GTGGCATTTATTTTAGAACGAAAAGAG | 58.150 | 33.333 | 0.00 | 0.00 | 32.06 | 2.85 |
504 | 517 | 8.573035 | AGTGGCATTTATTTTAGAACGAAAAGA | 58.427 | 29.630 | 0.00 | 0.00 | 32.06 | 2.52 |
505 | 518 | 8.638565 | CAGTGGCATTTATTTTAGAACGAAAAG | 58.361 | 33.333 | 0.00 | 0.00 | 32.06 | 2.27 |
506 | 519 | 8.353684 | TCAGTGGCATTTATTTTAGAACGAAAA | 58.646 | 29.630 | 0.00 | 0.00 | 33.04 | 2.29 |
507 | 520 | 7.877003 | TCAGTGGCATTTATTTTAGAACGAAA | 58.123 | 30.769 | 0.00 | 0.00 | 0.00 | 3.46 |
508 | 521 | 7.441890 | TCAGTGGCATTTATTTTAGAACGAA | 57.558 | 32.000 | 0.00 | 0.00 | 0.00 | 3.85 |
509 | 522 | 7.624360 | ATCAGTGGCATTTATTTTAGAACGA | 57.376 | 32.000 | 0.00 | 0.00 | 0.00 | 3.85 |
523 | 536 | 9.243105 | ACTAACTTTATACAAAATCAGTGGCAT | 57.757 | 29.630 | 0.00 | 0.00 | 0.00 | 4.40 |
554 | 571 | 6.603224 | ACTGATACTCCGTCCTAGAATAAGT | 58.397 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
610 | 1723 | 2.810164 | CCCTAGGCCTCCTGTATAGTC | 58.190 | 57.143 | 9.68 | 0.00 | 34.61 | 2.59 |
612 | 1725 | 1.562783 | GCCCTAGGCCTCCTGTATAG | 58.437 | 60.000 | 9.68 | 0.00 | 44.06 | 1.31 |
614 | 1727 | 4.650085 | GCCCTAGGCCTCCTGTAT | 57.350 | 61.111 | 9.68 | 0.00 | 44.06 | 2.29 |
636 | 3357 | 4.202567 | TGACTGGATTGCCCTTACTTTCTT | 60.203 | 41.667 | 0.00 | 0.00 | 35.38 | 2.52 |
643 | 3364 | 4.272489 | CTGAAATGACTGGATTGCCCTTA | 58.728 | 43.478 | 0.00 | 0.00 | 35.38 | 2.69 |
669 | 3390 | 0.676782 | GGTTTGACCCACATCCGGAG | 60.677 | 60.000 | 11.34 | 4.72 | 30.04 | 4.63 |
914 | 3636 | 2.610873 | GAGTCGGGAGGATTTAGGGAT | 58.389 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
915 | 3637 | 1.753141 | CGAGTCGGGAGGATTTAGGGA | 60.753 | 57.143 | 4.10 | 0.00 | 0.00 | 4.20 |
1103 | 3836 | 0.175073 | AAAGACGATACGCCCTGGTC | 59.825 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1104 | 3837 | 0.108329 | CAAAGACGATACGCCCTGGT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1105 | 3838 | 0.108329 | ACAAAGACGATACGCCCTGG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.45 |
1107 | 3840 | 1.407979 | CCTACAAAGACGATACGCCCT | 59.592 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
1111 | 3850 | 6.657836 | AAAAATCCCTACAAAGACGATACG | 57.342 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
1161 | 3900 | 0.105593 | AGATGATACTGCGTGGCCTG | 59.894 | 55.000 | 3.32 | 0.00 | 0.00 | 4.85 |
1202 | 3941 | 7.941795 | AGAAATACAATCGACTAATAACCCG | 57.058 | 36.000 | 0.00 | 0.00 | 0.00 | 5.28 |
1236 | 3979 | 2.350772 | CGTTTCTTGCAGGGTCAATCAC | 60.351 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1264 | 4007 | 8.712228 | AAGTCCAATCCTAGAACAAGAAAATT | 57.288 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
1271 | 4014 | 7.004086 | ACATTTGAAGTCCAATCCTAGAACAA | 58.996 | 34.615 | 0.00 | 0.00 | 34.23 | 2.83 |
1293 | 4036 | 4.080863 | AGCGGGAATCTAGAAACTGAACAT | 60.081 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
1301 | 4044 | 5.202004 | ACTAAGAGAGCGGGAATCTAGAAA | 58.798 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
1313 | 4056 | 1.996191 | GAAGCACCAACTAAGAGAGCG | 59.004 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
1323 | 4066 | 7.116233 | CCAAAACAACATATAAGAAGCACCAAC | 59.884 | 37.037 | 0.00 | 0.00 | 0.00 | 3.77 |
1327 | 4070 | 7.367285 | TGACCAAAACAACATATAAGAAGCAC | 58.633 | 34.615 | 0.00 | 0.00 | 0.00 | 4.40 |
1329 | 4072 | 6.528072 | GCTGACCAAAACAACATATAAGAAGC | 59.472 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
1330 | 4073 | 7.029563 | GGCTGACCAAAACAACATATAAGAAG | 58.970 | 38.462 | 0.00 | 0.00 | 35.26 | 2.85 |
1337 | 4080 | 4.037446 | GTGAAGGCTGACCAAAACAACATA | 59.963 | 41.667 | 0.00 | 0.00 | 39.06 | 2.29 |
1375 | 4119 | 9.486497 | TGAAAGCAAAGCAAAAACATTGATATA | 57.514 | 25.926 | 0.00 | 0.00 | 0.00 | 0.86 |
1376 | 4120 | 8.380743 | TGAAAGCAAAGCAAAAACATTGATAT | 57.619 | 26.923 | 0.00 | 0.00 | 0.00 | 1.63 |
1377 | 4121 | 7.783090 | TGAAAGCAAAGCAAAAACATTGATA | 57.217 | 28.000 | 0.00 | 0.00 | 0.00 | 2.15 |
1379 | 4123 | 6.680874 | ATGAAAGCAAAGCAAAAACATTGA | 57.319 | 29.167 | 0.00 | 0.00 | 0.00 | 2.57 |
1380 | 4124 | 8.071368 | ACATATGAAAGCAAAGCAAAAACATTG | 58.929 | 29.630 | 10.38 | 0.00 | 0.00 | 2.82 |
1382 | 4126 | 7.733402 | ACATATGAAAGCAAAGCAAAAACAT | 57.267 | 28.000 | 10.38 | 0.00 | 0.00 | 2.71 |
1442 | 4204 | 6.935208 | ACATAACTTAGAACTTCACTTGGGAC | 59.065 | 38.462 | 0.00 | 0.00 | 0.00 | 4.46 |
1509 | 4272 | 2.962421 | GTTCCCCTGAATTTTGTCCACA | 59.038 | 45.455 | 0.00 | 0.00 | 31.98 | 4.17 |
1581 | 4344 | 1.289066 | GTACTGCACAGTGAGCGGA | 59.711 | 57.895 | 25.61 | 6.78 | 42.52 | 5.54 |
1617 | 4380 | 1.603931 | GGCCAGAAGCAAAAGTTCAGC | 60.604 | 52.381 | 0.00 | 0.00 | 46.50 | 4.26 |
1647 | 4410 | 1.673033 | CCAAGTACGTTCCTGGCTGAG | 60.673 | 57.143 | 0.00 | 0.00 | 0.00 | 3.35 |
1831 | 4594 | 5.126545 | ACCACGTGTTATGCTATACAAGAGA | 59.873 | 40.000 | 15.65 | 0.00 | 0.00 | 3.10 |
1835 | 4598 | 6.044046 | CCTAACCACGTGTTATGCTATACAA | 58.956 | 40.000 | 15.65 | 0.00 | 38.71 | 2.41 |
1920 | 4683 | 1.210155 | GGCTGCACGACCAAATGTC | 59.790 | 57.895 | 0.50 | 0.00 | 40.81 | 3.06 |
1930 | 4693 | 4.122776 | AGAAGAATAATACTGGCTGCACG | 58.877 | 43.478 | 0.50 | 0.00 | 0.00 | 5.34 |
1945 | 4708 | 5.176741 | AGCCTGAAGTCAATGAGAAGAAT | 57.823 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
1956 | 4719 | 7.502226 | TCTGAAAATCTAAAAAGCCTGAAGTCA | 59.498 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
1999 | 4765 | 4.039004 | AGTGCATTGTTTTCAGGCAATACA | 59.961 | 37.500 | 0.00 | 0.00 | 41.20 | 2.29 |
2002 | 4768 | 3.756933 | AGTGCATTGTTTTCAGGCAAT | 57.243 | 38.095 | 0.00 | 0.00 | 41.20 | 3.56 |
2269 | 5036 | 2.686558 | TGCGAAGTTGATTTCTGCAC | 57.313 | 45.000 | 0.00 | 0.00 | 34.32 | 4.57 |
2276 | 5043 | 5.437289 | TTTCAGACAATGCGAAGTTGATT | 57.563 | 34.783 | 0.00 | 0.00 | 0.00 | 2.57 |
2287 | 5054 | 8.383619 | GCACTAGTGTATAGTTTTCAGACAATG | 58.616 | 37.037 | 23.44 | 0.00 | 0.00 | 2.82 |
2359 | 5126 | 1.887344 | ATTGATGCCCCCGTTGCAAC | 61.887 | 55.000 | 19.89 | 19.89 | 42.92 | 4.17 |
2386 | 5153 | 0.456221 | AGCGTTGTACTGGAGGATCG | 59.544 | 55.000 | 0.00 | 0.00 | 34.37 | 3.69 |
2421 | 5188 | 5.505780 | TGAACGGGAGGATCATGTTAATTT | 58.494 | 37.500 | 0.00 | 0.00 | 34.72 | 1.82 |
2429 | 5196 | 4.080356 | TCATTCTTTGAACGGGAGGATCAT | 60.080 | 41.667 | 0.00 | 0.00 | 36.25 | 2.45 |
2478 | 5245 | 4.965814 | AGTATCATCGAGCATTGGATGTT | 58.034 | 39.130 | 0.00 | 0.00 | 39.65 | 2.71 |
2491 | 5258 | 6.948228 | CGCGTTAATTATGGAAAGTATCATCG | 59.052 | 38.462 | 0.00 | 0.00 | 0.00 | 3.84 |
2725 | 5502 | 3.387699 | AGCAGCCAACATAAAAGGTTGTT | 59.612 | 39.130 | 4.06 | 0.00 | 43.10 | 2.83 |
2743 | 5520 | 3.319755 | CCACTTGTTGGCAAAATAGCAG | 58.680 | 45.455 | 0.00 | 0.00 | 39.07 | 4.24 |
3136 | 5913 | 8.980596 | AGGCATTTATCCAAATAAAATGAGTGA | 58.019 | 29.630 | 10.34 | 0.00 | 39.98 | 3.41 |
3163 | 5940 | 9.020731 | AGTAAAACACATTATAACAGAAAGGGG | 57.979 | 33.333 | 0.00 | 0.00 | 0.00 | 4.79 |
3393 | 6177 | 4.998051 | AGTTGTGGTCCTACATTTTCCAT | 58.002 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
3437 | 6221 | 3.346631 | CTCAATTGGCAGTGGGCGC | 62.347 | 63.158 | 5.42 | 0.00 | 46.16 | 6.53 |
3490 | 6274 | 9.448438 | TTCAATATACTGAATAAGCAACACAGT | 57.552 | 29.630 | 0.00 | 0.00 | 42.94 | 3.55 |
3523 | 6307 | 7.979537 | AGAACACAGTGGGAAAAATTTAAAGTC | 59.020 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
3532 | 6316 | 2.687935 | GAGCAGAACACAGTGGGAAAAA | 59.312 | 45.455 | 0.00 | 0.00 | 0.00 | 1.94 |
3597 | 6382 | 2.568623 | AAGAAGATGGGCGTGACTTT | 57.431 | 45.000 | 0.00 | 0.00 | 0.00 | 2.66 |
3605 | 6390 | 4.725790 | AATTGCACTAAAGAAGATGGGC | 57.274 | 40.909 | 0.00 | 0.00 | 0.00 | 5.36 |
3617 | 6402 | 5.248248 | TGGATAGCTATGCCTAATTGCACTA | 59.752 | 40.000 | 21.04 | 0.00 | 45.48 | 2.74 |
3714 | 6503 | 4.344679 | ACCAAATTGAGATCAGTTGGCAAA | 59.655 | 37.500 | 19.57 | 0.00 | 42.18 | 3.68 |
3890 | 6679 | 0.536006 | GGAAGACAAGTGCAGTGGCT | 60.536 | 55.000 | 0.00 | 0.00 | 41.91 | 4.75 |
4374 | 7186 | 4.887748 | AGCCACGTAAAGATCATCCATAG | 58.112 | 43.478 | 0.00 | 0.00 | 0.00 | 2.23 |
4442 | 7254 | 5.792741 | TCAATCAACAAACATCCAAATCCC | 58.207 | 37.500 | 0.00 | 0.00 | 0.00 | 3.85 |
4586 | 7398 | 1.879380 | TCACAGAACAAAATGAGGCCG | 59.121 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
4647 | 7460 | 6.716934 | TGTATTTGCAAGTAAAACCAGGAA | 57.283 | 33.333 | 2.90 | 0.00 | 0.00 | 3.36 |
4729 | 7545 | 2.029110 | CCAAATCGTGTCTGGCCATTTT | 60.029 | 45.455 | 5.51 | 0.00 | 0.00 | 1.82 |
4805 | 7825 | 8.853077 | ATCAGTATCACCATAATTACACATGG | 57.147 | 34.615 | 0.00 | 3.79 | 46.05 | 3.66 |
4871 | 7891 | 9.899226 | AGTATGCATGAGAAAAGAAAGTAAAAC | 57.101 | 29.630 | 10.16 | 0.00 | 0.00 | 2.43 |
4889 | 7909 | 9.189156 | ACAGTTTAATTATGACCAAGTATGCAT | 57.811 | 29.630 | 3.79 | 3.79 | 0.00 | 3.96 |
4916 | 7936 | 3.960102 | TGCAGTGAAATTTTCCTCAAGGT | 59.040 | 39.130 | 6.68 | 0.00 | 36.34 | 3.50 |
4965 | 7985 | 8.613482 | CATGCCAGATAGATGCATTCTAATAAG | 58.387 | 37.037 | 0.00 | 0.00 | 42.79 | 1.73 |
5031 | 8054 | 3.181458 | GGTGTCCCTTGTAAAGTGAGTGA | 60.181 | 47.826 | 0.00 | 0.00 | 44.25 | 3.41 |
5184 | 8207 | 0.543749 | GTATGCCAAGCTCCCTCAGT | 59.456 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5202 | 8225 | 5.585445 | ACATAGACTCGACTCGTATTTCAGT | 59.415 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5217 | 8240 | 3.002862 | AGTCGATCGAGCAACATAGACTC | 59.997 | 47.826 | 20.09 | 1.46 | 33.01 | 3.36 |
5220 | 8243 | 3.610786 | GAGTCGATCGAGCAACATAGA | 57.389 | 47.619 | 20.09 | 0.00 | 0.00 | 1.98 |
5421 | 8444 | 3.887716 | GCAGGTCAGAGAATAAATGGCAT | 59.112 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
5492 | 8516 | 5.419542 | TCAGTGATAATACAGAGTGCAACC | 58.580 | 41.667 | 0.00 | 0.00 | 37.80 | 3.77 |
5571 | 8599 | 8.231837 | GCTTACGAAACCTAATGATGTTAAACA | 58.768 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
5577 | 8605 | 6.622896 | GCTTTGCTTACGAAACCTAATGATGT | 60.623 | 38.462 | 0.00 | 0.00 | 0.00 | 3.06 |
5578 | 8606 | 5.739161 | GCTTTGCTTACGAAACCTAATGATG | 59.261 | 40.000 | 0.00 | 0.00 | 0.00 | 3.07 |
5581 | 8609 | 5.041951 | TGCTTTGCTTACGAAACCTAATG | 57.958 | 39.130 | 0.00 | 0.00 | 0.00 | 1.90 |
5583 | 8611 | 4.131596 | ACTGCTTTGCTTACGAAACCTAA | 58.868 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
5584 | 8612 | 3.735591 | ACTGCTTTGCTTACGAAACCTA | 58.264 | 40.909 | 0.00 | 0.00 | 0.00 | 3.08 |
5585 | 8613 | 2.548480 | GACTGCTTTGCTTACGAAACCT | 59.452 | 45.455 | 0.00 | 0.00 | 0.00 | 3.50 |
5586 | 8614 | 2.289547 | TGACTGCTTTGCTTACGAAACC | 59.710 | 45.455 | 0.00 | 0.00 | 0.00 | 3.27 |
5587 | 8615 | 3.602390 | TGACTGCTTTGCTTACGAAAC | 57.398 | 42.857 | 0.00 | 0.00 | 0.00 | 2.78 |
5588 | 8616 | 4.036262 | ACATTGACTGCTTTGCTTACGAAA | 59.964 | 37.500 | 0.00 | 0.00 | 0.00 | 3.46 |
5589 | 8617 | 3.563808 | ACATTGACTGCTTTGCTTACGAA | 59.436 | 39.130 | 0.00 | 0.00 | 0.00 | 3.85 |
5590 | 8618 | 3.058983 | CACATTGACTGCTTTGCTTACGA | 60.059 | 43.478 | 0.00 | 0.00 | 0.00 | 3.43 |
5591 | 8619 | 3.228749 | CACATTGACTGCTTTGCTTACG | 58.771 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
5592 | 8620 | 3.976942 | CACACATTGACTGCTTTGCTTAC | 59.023 | 43.478 | 0.00 | 0.00 | 0.00 | 2.34 |
5616 | 8644 | 1.474077 | GCCCGAGTTGAATCAAATGCT | 59.526 | 47.619 | 0.00 | 0.00 | 0.00 | 3.79 |
5904 | 8933 | 0.742505 | TTGATGACCCTACGGTAGCG | 59.257 | 55.000 | 13.69 | 13.69 | 44.88 | 4.26 |
5926 | 8955 | 6.979238 | GCAGTAACACCAGTTCTACCTATAAG | 59.021 | 42.308 | 0.00 | 0.00 | 39.15 | 1.73 |
5974 | 9003 | 5.469760 | GGATGAAACAAAAAGATGGTTTGGG | 59.530 | 40.000 | 0.00 | 0.00 | 39.74 | 4.12 |
5979 | 9008 | 7.307131 | AGATTGGATGAAACAAAAAGATGGT | 57.693 | 32.000 | 0.00 | 0.00 | 0.00 | 3.55 |
5980 | 9009 | 9.709495 | TTTAGATTGGATGAAACAAAAAGATGG | 57.291 | 29.630 | 0.00 | 0.00 | 0.00 | 3.51 |
6023 | 9053 | 3.308530 | GCTGGTTGAATTTCGGACAAAG | 58.691 | 45.455 | 5.46 | 3.99 | 0.00 | 2.77 |
6094 | 9124 | 3.057806 | CCAATGTTTAGGGTGTCCGTTTC | 60.058 | 47.826 | 0.00 | 0.00 | 38.33 | 2.78 |
6138 | 9171 | 1.376424 | CTCCACAAGCGCTGTCCAT | 60.376 | 57.895 | 12.58 | 0.00 | 35.47 | 3.41 |
6139 | 9172 | 2.031012 | CTCCACAAGCGCTGTCCA | 59.969 | 61.111 | 12.58 | 0.00 | 35.47 | 4.02 |
6140 | 9173 | 2.029844 | GACTCCACAAGCGCTGTCC | 61.030 | 63.158 | 12.58 | 0.00 | 35.47 | 4.02 |
6145 | 9178 | 3.112709 | GACCGACTCCACAAGCGC | 61.113 | 66.667 | 0.00 | 0.00 | 0.00 | 5.92 |
6146 | 9179 | 1.078759 | GATGACCGACTCCACAAGCG | 61.079 | 60.000 | 0.00 | 0.00 | 0.00 | 4.68 |
6150 | 9183 | 1.207089 | GATTGGATGACCGACTCCACA | 59.793 | 52.381 | 0.00 | 0.00 | 41.20 | 4.17 |
6185 | 9218 | 1.112950 | GAGAAGGAACCTAGGACGGG | 58.887 | 60.000 | 17.98 | 0.00 | 0.00 | 5.28 |
6200 | 9233 | 3.084039 | GTGCATGTCAAATGGAGGAGAA | 58.916 | 45.455 | 0.00 | 0.00 | 0.00 | 2.87 |
6338 | 9375 | 1.976474 | GGAGGATGTTTGGCGCCAA | 60.976 | 57.895 | 37.30 | 37.30 | 0.00 | 4.52 |
6341 | 9378 | 2.044946 | AGGGAGGATGTTTGGCGC | 60.045 | 61.111 | 0.00 | 0.00 | 0.00 | 6.53 |
6367 | 9404 | 2.189521 | CTACCCGCCTCCGCAAAT | 59.810 | 61.111 | 0.00 | 0.00 | 34.03 | 2.32 |
6394 | 9431 | 1.008538 | GCTCACAAAGCCAACACGG | 60.009 | 57.895 | 0.00 | 0.00 | 45.92 | 4.94 |
6422 | 9468 | 4.388499 | GAGGCAAAGGACCCGCGA | 62.388 | 66.667 | 8.23 | 0.00 | 0.00 | 5.87 |
6457 | 9503 | 0.326264 | GGTGGTGGCAGAGATGTTCT | 59.674 | 55.000 | 0.00 | 0.00 | 36.25 | 3.01 |
6515 | 9561 | 1.676014 | GCTATGCACTTGAGTTCCCGT | 60.676 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
6531 | 9577 | 0.467384 | ACTCCATTCGCTGCTGCTAT | 59.533 | 50.000 | 14.03 | 4.30 | 36.97 | 2.97 |
6533 | 9579 | 1.744368 | CACTCCATTCGCTGCTGCT | 60.744 | 57.895 | 14.03 | 0.00 | 36.97 | 4.24 |
6579 | 9625 | 0.028770 | CTTCCGCACTGTTTTCGCAA | 59.971 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
6631 | 9677 | 2.762554 | CCAACACCCCTGTCCCACA | 61.763 | 63.158 | 0.00 | 0.00 | 0.00 | 4.17 |
6637 | 9683 | 1.131303 | TCGGAATCCAACACCCCTGT | 61.131 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
6685 | 9734 | 4.067192 | GGTAGACCGAAGCAAACCTAAAA | 58.933 | 43.478 | 0.00 | 0.00 | 0.00 | 1.52 |
6691 | 9740 | 2.450609 | TCAGGTAGACCGAAGCAAAC | 57.549 | 50.000 | 0.00 | 0.00 | 42.08 | 2.93 |
6707 | 9756 | 3.044986 | CTGTTTGTGCGTCCAAATTCAG | 58.955 | 45.455 | 5.20 | 5.48 | 36.75 | 3.02 |
6708 | 9757 | 2.685388 | TCTGTTTGTGCGTCCAAATTCA | 59.315 | 40.909 | 5.20 | 0.53 | 36.75 | 2.57 |
6724 | 9773 | 6.407202 | ACGCTGTCTATTCCTTTAATCTGTT | 58.593 | 36.000 | 0.00 | 0.00 | 0.00 | 3.16 |
6727 | 9776 | 6.640518 | TCAACGCTGTCTATTCCTTTAATCT | 58.359 | 36.000 | 0.00 | 0.00 | 0.00 | 2.40 |
6732 | 9781 | 4.003648 | CCTTCAACGCTGTCTATTCCTTT | 58.996 | 43.478 | 0.00 | 0.00 | 0.00 | 3.11 |
6733 | 9782 | 3.600388 | CCTTCAACGCTGTCTATTCCTT | 58.400 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
6734 | 9783 | 2.678190 | GCCTTCAACGCTGTCTATTCCT | 60.678 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
6740 | 9795 | 1.004440 | GAGGCCTTCAACGCTGTCT | 60.004 | 57.895 | 6.77 | 0.00 | 0.00 | 3.41 |
6744 | 9799 | 1.270550 | CATTTTGAGGCCTTCAACGCT | 59.729 | 47.619 | 6.77 | 0.00 | 45.22 | 5.07 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.