Multiple sequence alignment - TraesCS2A01G194100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G194100 chr2A 100.000 2339 0 0 1 2339 162288609 162290947 0.000000e+00 4320
1 TraesCS2A01G194100 chr2A 94.567 497 25 2 867 1362 728086465 728085970 0.000000e+00 767
2 TraesCS2A01G194100 chr2B 84.662 991 74 44 1361 2339 197213830 197212906 0.000000e+00 917
3 TraesCS2A01G194100 chr2B 89.305 374 36 1 282 655 197214316 197213947 1.270000e-127 466
4 TraesCS2A01G194100 chr2B 95.053 283 9 5 1 282 197214628 197214350 7.670000e-120 440
5 TraesCS2A01G194100 chr3D 96.573 496 17 0 867 1362 90829930 90830425 0.000000e+00 822
6 TraesCS2A01G194100 chr3D 95.775 497 20 1 867 1363 177014578 177014083 0.000000e+00 800
7 TraesCS2A01G194100 chr6D 96.177 497 18 1 867 1362 462398882 462398386 0.000000e+00 811
8 TraesCS2A01G194100 chr6D 95.976 497 19 1 867 1362 452071184 452070688 0.000000e+00 806
9 TraesCS2A01G194100 chr2D 87.972 715 48 18 1361 2044 138757496 138756789 0.000000e+00 809
10 TraesCS2A01G194100 chr2D 91.525 590 45 2 282 868 138758066 138757479 0.000000e+00 808
11 TraesCS2A01G194100 chr2D 93.822 437 18 5 1907 2339 138756870 138756439 0.000000e+00 649
12 TraesCS2A01G194100 chr2D 97.518 282 6 1 1 282 138758380 138758100 4.520000e-132 481
13 TraesCS2A01G194100 chr1D 95.400 500 22 1 867 1365 176361014 176361513 0.000000e+00 795
14 TraesCS2A01G194100 chr1D 95.171 497 23 1 867 1362 356881459 356881955 0.000000e+00 784
15 TraesCS2A01G194100 chr5B 95.363 496 23 0 867 1362 684173689 684174184 0.000000e+00 789
16 TraesCS2A01G194100 chr7D 94.779 498 25 1 867 1363 219849406 219848909 0.000000e+00 774


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G194100 chr2A 162288609 162290947 2338 False 4320.000000 4320 100.000000 1 2339 1 chr2A.!!$F1 2338
1 TraesCS2A01G194100 chr2B 197212906 197214628 1722 True 607.666667 917 89.673333 1 2339 3 chr2B.!!$R1 2338
2 TraesCS2A01G194100 chr2D 138756439 138758380 1941 True 686.750000 809 92.709250 1 2339 4 chr2D.!!$R1 2338

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
936 978 0.03759 CGATGGGGGTGGTTTTGAGA 59.962 55.0 0.0 0.0 0.0 3.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1992 2119 0.68792 TGTAAGTGGTGGCCAATCGA 59.312 50.0 7.24 0.0 34.18 3.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.685803 CCTATTGGTCCAGCAATGGCA 60.686 52.381 13.13 0.00 44.61 4.92
34 35 1.890625 TTGGTCCAGCAATGGCATGC 61.891 55.000 9.90 9.90 46.78 4.06
84 85 5.189736 TCCATTGACTTGTTAGAGCTACCAT 59.810 40.000 0.00 0.00 0.00 3.55
126 127 5.593010 ACTGTACAGATTTCGAGAATAGCC 58.407 41.667 29.30 0.00 0.00 3.93
127 128 5.361285 ACTGTACAGATTTCGAGAATAGCCT 59.639 40.000 29.30 0.00 0.00 4.58
128 129 5.833082 TGTACAGATTTCGAGAATAGCCTC 58.167 41.667 0.00 0.00 0.00 4.70
144 147 1.682854 GCCTCTCTCTCTGACCATGAG 59.317 57.143 0.00 0.00 0.00 2.90
292 331 7.082602 GCTATCATTTGCAAATATGTCCAGAG 58.917 38.462 23.69 12.90 0.00 3.35
386 428 9.425893 CAGTACAAGCAAAGTATGATAAATTCG 57.574 33.333 0.00 0.00 0.00 3.34
444 486 3.314357 TGAGTGGACATACCTTATCGTCG 59.686 47.826 0.00 0.00 39.86 5.12
567 609 1.424638 CCCTAACACCTCATCCGGAT 58.575 55.000 12.38 12.38 0.00 4.18
603 645 2.037304 GCCCTAGATCCCTCCCCTCA 62.037 65.000 0.00 0.00 0.00 3.86
637 679 1.971505 ATTGATCTCCTTGCCGCGGA 61.972 55.000 33.48 11.82 0.00 5.54
650 692 4.070552 GCGGACGTCTGCCCTCTT 62.071 66.667 34.42 0.00 42.27 2.85
655 697 0.674895 GACGTCTGCCCTCTTGCAAT 60.675 55.000 8.70 0.00 41.51 3.56
669 711 2.192664 TGCAATAGGTTTTCGCTCCA 57.807 45.000 0.00 0.00 0.00 3.86
719 761 4.202040 TGCTTTGATACATTGCCATACAGC 60.202 41.667 0.00 0.00 0.00 4.40
758 800 0.107410 AAACTTCGTGTGGCTGACCA 60.107 50.000 0.00 0.00 46.51 4.02
800 842 2.186160 CACCGTGCCTTCTGTTGCA 61.186 57.895 0.00 0.00 34.54 4.08
819 861 2.164422 GCAGTTTGATCTGGCCTTTACC 59.836 50.000 3.32 0.00 36.12 2.85
820 862 2.420022 CAGTTTGATCTGGCCTTTACCG 59.580 50.000 3.32 0.00 0.00 4.02
870 912 8.458843 CCAATTAAGGTTAGAACTATGGTTGTG 58.541 37.037 0.00 0.00 35.58 3.33
872 914 9.802039 AATTAAGGTTAGAACTATGGTTGTGAA 57.198 29.630 0.00 0.00 35.58 3.18
873 915 9.802039 ATTAAGGTTAGAACTATGGTTGTGAAA 57.198 29.630 0.00 0.00 35.58 2.69
874 916 7.506328 AAGGTTAGAACTATGGTTGTGAAAC 57.494 36.000 0.00 0.00 35.58 2.78
875 917 6.838382 AGGTTAGAACTATGGTTGTGAAACT 58.162 36.000 0.00 0.00 38.04 2.66
876 918 7.287810 AGGTTAGAACTATGGTTGTGAAACTT 58.712 34.615 0.00 0.00 38.04 2.66
877 919 8.434392 AGGTTAGAACTATGGTTGTGAAACTTA 58.566 33.333 0.00 0.00 38.04 2.24
878 920 9.059260 GGTTAGAACTATGGTTGTGAAACTTAA 57.941 33.333 0.00 0.00 38.04 1.85
879 921 9.874215 GTTAGAACTATGGTTGTGAAACTTAAC 57.126 33.333 0.00 0.00 38.04 2.01
880 922 7.186021 AGAACTATGGTTGTGAAACTTAACG 57.814 36.000 0.00 0.00 38.04 3.18
881 923 6.764560 AGAACTATGGTTGTGAAACTTAACGT 59.235 34.615 0.00 0.00 38.04 3.99
882 924 6.930667 ACTATGGTTGTGAAACTTAACGTT 57.069 33.333 5.88 5.88 38.04 3.99
883 925 6.721321 ACTATGGTTGTGAAACTTAACGTTG 58.279 36.000 11.99 0.00 38.04 4.10
884 926 5.821516 ATGGTTGTGAAACTTAACGTTGA 57.178 34.783 11.99 0.73 38.04 3.18
885 927 5.821516 TGGTTGTGAAACTTAACGTTGAT 57.178 34.783 11.99 0.00 38.04 2.57
886 928 5.574082 TGGTTGTGAAACTTAACGTTGATG 58.426 37.500 11.99 3.28 38.04 3.07
887 929 4.439776 GGTTGTGAAACTTAACGTTGATGC 59.560 41.667 11.99 0.00 38.04 3.91
888 930 5.270853 GTTGTGAAACTTAACGTTGATGCT 58.729 37.500 11.99 0.00 38.04 3.79
889 931 5.493133 TGTGAAACTTAACGTTGATGCTT 57.507 34.783 11.99 0.00 38.04 3.91
890 932 5.507077 TGTGAAACTTAACGTTGATGCTTC 58.493 37.500 11.99 8.31 38.04 3.86
891 933 5.295787 TGTGAAACTTAACGTTGATGCTTCT 59.704 36.000 11.99 0.00 38.04 2.85
892 934 6.183360 TGTGAAACTTAACGTTGATGCTTCTT 60.183 34.615 11.99 0.00 38.04 2.52
893 935 6.691388 GTGAAACTTAACGTTGATGCTTCTTT 59.309 34.615 11.99 0.00 35.61 2.52
894 936 7.220108 GTGAAACTTAACGTTGATGCTTCTTTT 59.780 33.333 11.99 0.00 35.61 2.27
895 937 7.219917 TGAAACTTAACGTTGATGCTTCTTTTG 59.780 33.333 11.99 0.00 35.61 2.44
896 938 6.371809 ACTTAACGTTGATGCTTCTTTTGA 57.628 33.333 11.99 0.00 0.00 2.69
897 939 6.199393 ACTTAACGTTGATGCTTCTTTTGAC 58.801 36.000 11.99 0.00 0.00 3.18
898 940 3.626028 ACGTTGATGCTTCTTTTGACC 57.374 42.857 0.88 0.00 0.00 4.02
899 941 2.948979 ACGTTGATGCTTCTTTTGACCA 59.051 40.909 0.88 0.00 0.00 4.02
900 942 3.243068 ACGTTGATGCTTCTTTTGACCAC 60.243 43.478 0.88 0.00 0.00 4.16
901 943 3.300009 GTTGATGCTTCTTTTGACCACG 58.700 45.455 0.88 0.00 0.00 4.94
902 944 2.844946 TGATGCTTCTTTTGACCACGA 58.155 42.857 0.88 0.00 0.00 4.35
903 945 2.548057 TGATGCTTCTTTTGACCACGAC 59.452 45.455 0.88 0.00 0.00 4.34
904 946 1.305201 TGCTTCTTTTGACCACGACC 58.695 50.000 0.00 0.00 0.00 4.79
905 947 1.134220 TGCTTCTTTTGACCACGACCT 60.134 47.619 0.00 0.00 0.00 3.85
906 948 1.264288 GCTTCTTTTGACCACGACCTG 59.736 52.381 0.00 0.00 0.00 4.00
907 949 1.264288 CTTCTTTTGACCACGACCTGC 59.736 52.381 0.00 0.00 0.00 4.85
908 950 0.468226 TCTTTTGACCACGACCTGCT 59.532 50.000 0.00 0.00 0.00 4.24
909 951 1.134220 TCTTTTGACCACGACCTGCTT 60.134 47.619 0.00 0.00 0.00 3.91
910 952 2.103432 TCTTTTGACCACGACCTGCTTA 59.897 45.455 0.00 0.00 0.00 3.09
911 953 2.163818 TTTGACCACGACCTGCTTAG 57.836 50.000 0.00 0.00 0.00 2.18
912 954 0.320374 TTGACCACGACCTGCTTAGG 59.680 55.000 0.00 0.00 0.00 2.69
913 955 1.218316 GACCACGACCTGCTTAGGG 59.782 63.158 0.00 0.00 0.00 3.53
914 956 2.240162 GACCACGACCTGCTTAGGGG 62.240 65.000 0.00 0.00 0.00 4.79
915 957 2.125106 CACGACCTGCTTAGGGGC 60.125 66.667 0.00 0.00 0.00 5.80
916 958 2.606519 ACGACCTGCTTAGGGGCA 60.607 61.111 0.00 0.00 40.15 5.36
917 959 2.125106 CGACCTGCTTAGGGGCAC 60.125 66.667 0.00 0.00 37.29 5.01
918 960 2.125106 GACCTGCTTAGGGGCACG 60.125 66.667 0.00 0.00 37.29 5.34
919 961 2.606519 ACCTGCTTAGGGGCACGA 60.607 61.111 0.00 0.00 37.29 4.35
920 962 1.972660 GACCTGCTTAGGGGCACGAT 61.973 60.000 0.00 0.00 37.29 3.73
921 963 1.524621 CCTGCTTAGGGGCACGATG 60.525 63.158 0.00 0.00 37.29 3.84
922 964 1.524621 CTGCTTAGGGGCACGATGG 60.525 63.158 0.00 0.00 37.29 3.51
923 965 2.203209 GCTTAGGGGCACGATGGG 60.203 66.667 0.00 0.00 0.00 4.00
924 966 2.510906 CTTAGGGGCACGATGGGG 59.489 66.667 0.00 0.00 0.00 4.96
925 967 3.093835 TTAGGGGCACGATGGGGG 61.094 66.667 0.00 0.00 0.00 5.40
926 968 3.954740 TTAGGGGCACGATGGGGGT 62.955 63.158 0.00 0.00 0.00 4.95
930 972 4.360405 GGCACGATGGGGGTGGTT 62.360 66.667 0.00 0.00 35.94 3.67
931 973 2.282887 GCACGATGGGGGTGGTTT 60.283 61.111 0.00 0.00 35.94 3.27
932 974 1.906333 GCACGATGGGGGTGGTTTT 60.906 57.895 0.00 0.00 35.94 2.43
933 975 1.963679 CACGATGGGGGTGGTTTTG 59.036 57.895 0.00 0.00 0.00 2.44
934 976 0.538516 CACGATGGGGGTGGTTTTGA 60.539 55.000 0.00 0.00 0.00 2.69
935 977 0.251165 ACGATGGGGGTGGTTTTGAG 60.251 55.000 0.00 0.00 0.00 3.02
936 978 0.037590 CGATGGGGGTGGTTTTGAGA 59.962 55.000 0.00 0.00 0.00 3.27
937 979 1.839424 GATGGGGGTGGTTTTGAGAG 58.161 55.000 0.00 0.00 0.00 3.20
938 980 1.354368 GATGGGGGTGGTTTTGAGAGA 59.646 52.381 0.00 0.00 0.00 3.10
939 981 1.455822 TGGGGGTGGTTTTGAGAGAT 58.544 50.000 0.00 0.00 0.00 2.75
940 982 1.075374 TGGGGGTGGTTTTGAGAGATG 59.925 52.381 0.00 0.00 0.00 2.90
941 983 1.354368 GGGGGTGGTTTTGAGAGATGA 59.646 52.381 0.00 0.00 0.00 2.92
942 984 2.225017 GGGGGTGGTTTTGAGAGATGAA 60.225 50.000 0.00 0.00 0.00 2.57
943 985 3.496331 GGGGTGGTTTTGAGAGATGAAA 58.504 45.455 0.00 0.00 0.00 2.69
944 986 3.895041 GGGGTGGTTTTGAGAGATGAAAA 59.105 43.478 0.00 0.00 0.00 2.29
945 987 4.343814 GGGGTGGTTTTGAGAGATGAAAAA 59.656 41.667 0.00 0.00 0.00 1.94
946 988 5.509670 GGGGTGGTTTTGAGAGATGAAAAAG 60.510 44.000 0.00 0.00 0.00 2.27
947 989 5.509670 GGGTGGTTTTGAGAGATGAAAAAGG 60.510 44.000 0.00 0.00 0.00 3.11
948 990 5.069119 GGTGGTTTTGAGAGATGAAAAAGGT 59.931 40.000 0.00 0.00 0.00 3.50
949 991 6.264518 GGTGGTTTTGAGAGATGAAAAAGGTA 59.735 38.462 0.00 0.00 0.00 3.08
950 992 7.363431 GTGGTTTTGAGAGATGAAAAAGGTAG 58.637 38.462 0.00 0.00 0.00 3.18
951 993 6.490040 TGGTTTTGAGAGATGAAAAAGGTAGG 59.510 38.462 0.00 0.00 0.00 3.18
952 994 6.490381 GGTTTTGAGAGATGAAAAAGGTAGGT 59.510 38.462 0.00 0.00 0.00 3.08
953 995 7.014326 GGTTTTGAGAGATGAAAAAGGTAGGTT 59.986 37.037 0.00 0.00 0.00 3.50
954 996 8.414003 GTTTTGAGAGATGAAAAAGGTAGGTTT 58.586 33.333 0.00 0.00 0.00 3.27
955 997 9.635404 TTTTGAGAGATGAAAAAGGTAGGTTTA 57.365 29.630 0.00 0.00 0.00 2.01
956 998 9.807921 TTTGAGAGATGAAAAAGGTAGGTTTAT 57.192 29.630 0.00 0.00 0.00 1.40
957 999 9.449719 TTGAGAGATGAAAAAGGTAGGTTTATC 57.550 33.333 0.00 0.00 0.00 1.75
958 1000 7.764443 TGAGAGATGAAAAAGGTAGGTTTATCG 59.236 37.037 0.00 0.00 0.00 2.92
959 1001 7.621796 AGAGATGAAAAAGGTAGGTTTATCGT 58.378 34.615 0.00 0.00 0.00 3.73
960 1002 7.549488 AGAGATGAAAAAGGTAGGTTTATCGTG 59.451 37.037 0.00 0.00 0.00 4.35
961 1003 6.598064 AGATGAAAAAGGTAGGTTTATCGTGG 59.402 38.462 0.00 0.00 0.00 4.94
962 1004 5.005094 TGAAAAAGGTAGGTTTATCGTGGG 58.995 41.667 0.00 0.00 0.00 4.61
963 1005 4.914177 AAAAGGTAGGTTTATCGTGGGA 57.086 40.909 0.00 0.00 0.00 4.37
964 1006 4.482952 AAAGGTAGGTTTATCGTGGGAG 57.517 45.455 0.00 0.00 0.00 4.30
965 1007 2.395619 AGGTAGGTTTATCGTGGGAGG 58.604 52.381 0.00 0.00 0.00 4.30
966 1008 1.415289 GGTAGGTTTATCGTGGGAGGG 59.585 57.143 0.00 0.00 0.00 4.30
967 1009 2.391678 GTAGGTTTATCGTGGGAGGGA 58.608 52.381 0.00 0.00 0.00 4.20
968 1010 1.961133 AGGTTTATCGTGGGAGGGAA 58.039 50.000 0.00 0.00 0.00 3.97
969 1011 1.558294 AGGTTTATCGTGGGAGGGAAC 59.442 52.381 0.00 0.00 0.00 3.62
970 1012 1.648504 GTTTATCGTGGGAGGGAACG 58.351 55.000 0.00 0.00 41.11 3.95
971 1013 0.538118 TTTATCGTGGGAGGGAACGG 59.462 55.000 0.00 0.00 40.18 4.44
972 1014 1.332144 TTATCGTGGGAGGGAACGGG 61.332 60.000 0.00 0.00 40.18 5.28
973 1015 2.227494 TATCGTGGGAGGGAACGGGA 62.227 60.000 0.00 0.00 40.18 5.14
974 1016 3.315949 CGTGGGAGGGAACGGGAA 61.316 66.667 0.00 0.00 36.17 3.97
975 1017 2.669240 GTGGGAGGGAACGGGAAG 59.331 66.667 0.00 0.00 0.00 3.46
976 1018 1.916777 GTGGGAGGGAACGGGAAGA 60.917 63.158 0.00 0.00 0.00 2.87
977 1019 1.082206 TGGGAGGGAACGGGAAGAT 59.918 57.895 0.00 0.00 0.00 2.40
978 1020 0.549169 TGGGAGGGAACGGGAAGATT 60.549 55.000 0.00 0.00 0.00 2.40
979 1021 0.107165 GGGAGGGAACGGGAAGATTG 60.107 60.000 0.00 0.00 0.00 2.67
980 1022 0.909623 GGAGGGAACGGGAAGATTGA 59.090 55.000 0.00 0.00 0.00 2.57
981 1023 1.407025 GGAGGGAACGGGAAGATTGAC 60.407 57.143 0.00 0.00 0.00 3.18
982 1024 1.555533 GAGGGAACGGGAAGATTGACT 59.444 52.381 0.00 0.00 0.00 3.41
983 1025 2.764572 GAGGGAACGGGAAGATTGACTA 59.235 50.000 0.00 0.00 0.00 2.59
984 1026 3.385115 AGGGAACGGGAAGATTGACTAT 58.615 45.455 0.00 0.00 0.00 2.12
985 1027 3.780850 AGGGAACGGGAAGATTGACTATT 59.219 43.478 0.00 0.00 0.00 1.73
986 1028 3.877508 GGGAACGGGAAGATTGACTATTG 59.122 47.826 0.00 0.00 0.00 1.90
987 1029 3.312697 GGAACGGGAAGATTGACTATTGC 59.687 47.826 0.00 0.00 0.00 3.56
988 1030 2.550978 ACGGGAAGATTGACTATTGCG 58.449 47.619 0.00 0.00 0.00 4.85
989 1031 1.261619 CGGGAAGATTGACTATTGCGC 59.738 52.381 0.00 0.00 0.00 6.09
990 1032 2.288666 GGGAAGATTGACTATTGCGCA 58.711 47.619 5.66 5.66 0.00 6.09
991 1033 2.289002 GGGAAGATTGACTATTGCGCAG 59.711 50.000 11.31 0.87 0.00 5.18
992 1034 3.198068 GGAAGATTGACTATTGCGCAGA 58.802 45.455 11.31 1.35 0.00 4.26
993 1035 3.812053 GGAAGATTGACTATTGCGCAGAT 59.188 43.478 11.31 10.14 0.00 2.90
994 1036 4.319333 GGAAGATTGACTATTGCGCAGATG 60.319 45.833 11.31 7.14 0.00 2.90
995 1037 3.801698 AGATTGACTATTGCGCAGATGT 58.198 40.909 11.31 10.65 0.00 3.06
996 1038 3.558829 AGATTGACTATTGCGCAGATGTG 59.441 43.478 11.31 3.27 0.00 3.21
997 1039 2.385013 TGACTATTGCGCAGATGTGT 57.615 45.000 11.31 6.75 0.00 3.72
998 1040 2.698803 TGACTATTGCGCAGATGTGTT 58.301 42.857 11.31 0.00 0.00 3.32
999 1041 2.416202 TGACTATTGCGCAGATGTGTTG 59.584 45.455 11.31 0.00 0.00 3.33
1000 1042 2.672874 GACTATTGCGCAGATGTGTTGA 59.327 45.455 11.31 0.00 0.00 3.18
1001 1043 3.273434 ACTATTGCGCAGATGTGTTGAT 58.727 40.909 11.31 0.00 0.00 2.57
1002 1044 2.554806 ATTGCGCAGATGTGTTGATG 57.445 45.000 11.31 0.00 0.00 3.07
1003 1045 0.522626 TTGCGCAGATGTGTTGATGG 59.477 50.000 11.31 0.00 0.00 3.51
1004 1046 1.226491 GCGCAGATGTGTTGATGGC 60.226 57.895 0.30 0.00 0.00 4.40
1005 1047 1.061411 CGCAGATGTGTTGATGGCG 59.939 57.895 0.00 0.00 36.93 5.69
1006 1048 1.430632 GCAGATGTGTTGATGGCGG 59.569 57.895 0.00 0.00 0.00 6.13
1007 1049 1.026182 GCAGATGTGTTGATGGCGGA 61.026 55.000 0.00 0.00 0.00 5.54
1008 1050 1.452110 CAGATGTGTTGATGGCGGAA 58.548 50.000 0.00 0.00 0.00 4.30
1009 1051 1.399440 CAGATGTGTTGATGGCGGAAG 59.601 52.381 0.00 0.00 0.00 3.46
1026 1068 5.629079 CGGAAGCCTCAACTCTTAAATTT 57.371 39.130 0.00 0.00 0.00 1.82
1027 1069 5.393962 CGGAAGCCTCAACTCTTAAATTTG 58.606 41.667 0.00 0.00 0.00 2.32
1028 1070 5.619981 CGGAAGCCTCAACTCTTAAATTTGG 60.620 44.000 0.00 0.00 0.00 3.28
1029 1071 5.243954 GGAAGCCTCAACTCTTAAATTTGGT 59.756 40.000 0.00 0.00 0.00 3.67
1030 1072 6.433093 GGAAGCCTCAACTCTTAAATTTGGTA 59.567 38.462 0.00 0.00 0.00 3.25
1031 1073 7.122799 GGAAGCCTCAACTCTTAAATTTGGTAT 59.877 37.037 0.00 0.00 0.00 2.73
1032 1074 9.174166 GAAGCCTCAACTCTTAAATTTGGTATA 57.826 33.333 0.00 0.00 0.00 1.47
1033 1075 9.528489 AAGCCTCAACTCTTAAATTTGGTATAA 57.472 29.630 0.00 0.00 0.00 0.98
1034 1076 8.957466 AGCCTCAACTCTTAAATTTGGTATAAC 58.043 33.333 0.00 0.00 0.00 1.89
1035 1077 8.736244 GCCTCAACTCTTAAATTTGGTATAACA 58.264 33.333 0.00 0.00 0.00 2.41
1042 1084 9.221775 CTCTTAAATTTGGTATAACATTGACGC 57.778 33.333 0.00 0.00 0.00 5.19
1043 1085 8.731605 TCTTAAATTTGGTATAACATTGACGCA 58.268 29.630 0.00 0.00 0.00 5.24
1044 1086 9.347934 CTTAAATTTGGTATAACATTGACGCAA 57.652 29.630 0.00 0.00 0.00 4.85
1045 1087 9.692749 TTAAATTTGGTATAACATTGACGCAAA 57.307 25.926 0.00 0.00 0.00 3.68
1046 1088 7.810766 AATTTGGTATAACATTGACGCAAAG 57.189 32.000 0.00 0.00 0.00 2.77
1047 1089 4.955925 TGGTATAACATTGACGCAAAGG 57.044 40.909 0.00 0.00 0.00 3.11
1048 1090 3.692101 TGGTATAACATTGACGCAAAGGG 59.308 43.478 0.00 0.00 0.00 3.95
1049 1091 2.939460 ATAACATTGACGCAAAGGGC 57.061 45.000 0.00 0.00 39.90 5.19
1058 1100 4.329831 GCAAAGGGCGGGATGTAA 57.670 55.556 0.00 0.00 0.00 2.41
1059 1101 2.807247 GCAAAGGGCGGGATGTAAT 58.193 52.632 0.00 0.00 0.00 1.89
1060 1102 0.668535 GCAAAGGGCGGGATGTAATC 59.331 55.000 0.00 0.00 44.55 1.75
1061 1103 0.944386 CAAAGGGCGGGATGTAATCG 59.056 55.000 0.00 0.00 46.86 3.34
1062 1104 0.544697 AAAGGGCGGGATGTAATCGT 59.455 50.000 0.00 0.00 46.86 3.73
1063 1105 0.106149 AAGGGCGGGATGTAATCGTC 59.894 55.000 0.00 0.00 46.86 4.20
1064 1106 0.759436 AGGGCGGGATGTAATCGTCT 60.759 55.000 0.00 0.00 46.86 4.18
1065 1107 0.106149 GGGCGGGATGTAATCGTCTT 59.894 55.000 0.00 0.00 46.86 3.01
1066 1108 1.342174 GGGCGGGATGTAATCGTCTTA 59.658 52.381 0.00 0.00 46.86 2.10
1067 1109 2.028385 GGGCGGGATGTAATCGTCTTAT 60.028 50.000 0.00 0.00 46.86 1.73
1068 1110 3.556423 GGGCGGGATGTAATCGTCTTATT 60.556 47.826 0.00 0.00 46.86 1.40
1069 1111 4.322198 GGGCGGGATGTAATCGTCTTATTA 60.322 45.833 0.00 0.00 46.86 0.98
1070 1112 5.416947 GGCGGGATGTAATCGTCTTATTAT 58.583 41.667 0.00 0.00 46.86 1.28
1071 1113 5.873164 GGCGGGATGTAATCGTCTTATTATT 59.127 40.000 0.00 0.00 46.86 1.40
1072 1114 7.037438 GGCGGGATGTAATCGTCTTATTATTA 58.963 38.462 0.00 0.00 46.86 0.98
1073 1115 7.546667 GGCGGGATGTAATCGTCTTATTATTAA 59.453 37.037 0.00 0.00 46.86 1.40
1074 1116 8.378421 GCGGGATGTAATCGTCTTATTATTAAC 58.622 37.037 0.00 0.00 46.86 2.01
1075 1117 9.635520 CGGGATGTAATCGTCTTATTATTAACT 57.364 33.333 0.00 0.00 46.86 2.24
1080 1122 9.669353 TGTAATCGTCTTATTATTAACTCGGAC 57.331 33.333 0.00 0.00 0.00 4.79
1081 1123 9.669353 GTAATCGTCTTATTATTAACTCGGACA 57.331 33.333 0.00 0.00 0.00 4.02
1083 1125 7.975866 TCGTCTTATTATTAACTCGGACAAC 57.024 36.000 0.00 0.00 0.00 3.32
1084 1126 6.974622 TCGTCTTATTATTAACTCGGACAACC 59.025 38.462 0.00 0.00 0.00 3.77
1085 1127 6.976925 CGTCTTATTATTAACTCGGACAACCT 59.023 38.462 0.00 0.00 0.00 3.50
1086 1128 7.043590 CGTCTTATTATTAACTCGGACAACCTG 60.044 40.741 0.00 0.00 0.00 4.00
1087 1129 7.224167 GTCTTATTATTAACTCGGACAACCTGG 59.776 40.741 0.00 0.00 0.00 4.45
1088 1130 5.687166 ATTATTAACTCGGACAACCTGGA 57.313 39.130 0.00 0.00 0.00 3.86
1089 1131 3.611766 ATTAACTCGGACAACCTGGAG 57.388 47.619 0.00 0.00 32.45 3.86
1090 1132 1.263356 TAACTCGGACAACCTGGAGG 58.737 55.000 0.00 0.00 42.17 4.30
1104 1146 3.748083 CCTGGAGGTGATTGATACCATG 58.252 50.000 0.00 0.00 40.74 3.66
1105 1147 3.392285 CCTGGAGGTGATTGATACCATGA 59.608 47.826 0.00 0.00 40.74 3.07
1106 1148 4.141413 CCTGGAGGTGATTGATACCATGAA 60.141 45.833 0.00 0.00 40.74 2.57
1107 1149 5.039920 TGGAGGTGATTGATACCATGAAG 57.960 43.478 0.00 0.00 40.74 3.02
1108 1150 4.721274 TGGAGGTGATTGATACCATGAAGA 59.279 41.667 0.00 0.00 40.74 2.87
1109 1151 5.191522 TGGAGGTGATTGATACCATGAAGAA 59.808 40.000 0.00 0.00 40.74 2.52
1110 1152 5.529060 GGAGGTGATTGATACCATGAAGAAC 59.471 44.000 0.00 0.00 40.74 3.01
1111 1153 5.118990 AGGTGATTGATACCATGAAGAACG 58.881 41.667 0.00 0.00 40.74 3.95
1112 1154 4.273480 GGTGATTGATACCATGAAGAACGG 59.727 45.833 0.00 0.00 38.12 4.44
1113 1155 5.116180 GTGATTGATACCATGAAGAACGGA 58.884 41.667 0.00 0.00 0.00 4.69
1114 1156 5.235186 GTGATTGATACCATGAAGAACGGAG 59.765 44.000 0.00 0.00 0.00 4.63
1115 1157 3.819564 TGATACCATGAAGAACGGAGG 57.180 47.619 0.00 0.00 0.00 4.30
1116 1158 3.371034 TGATACCATGAAGAACGGAGGA 58.629 45.455 0.00 0.00 0.00 3.71
1117 1159 3.132289 TGATACCATGAAGAACGGAGGAC 59.868 47.826 0.00 0.00 0.00 3.85
1118 1160 1.348064 ACCATGAAGAACGGAGGACA 58.652 50.000 0.00 0.00 0.00 4.02
1119 1161 1.276421 ACCATGAAGAACGGAGGACAG 59.724 52.381 0.00 0.00 0.00 3.51
1120 1162 1.276421 CCATGAAGAACGGAGGACAGT 59.724 52.381 0.00 0.00 0.00 3.55
1121 1163 2.611518 CATGAAGAACGGAGGACAGTC 58.388 52.381 0.00 0.00 0.00 3.51
1122 1164 0.596577 TGAAGAACGGAGGACAGTCG 59.403 55.000 0.00 0.00 0.00 4.18
1123 1165 0.109226 GAAGAACGGAGGACAGTCGG 60.109 60.000 0.00 0.00 0.00 4.79
1124 1166 2.126031 GAACGGAGGACAGTCGGC 60.126 66.667 0.00 0.00 0.00 5.54
1125 1167 3.966026 GAACGGAGGACAGTCGGCG 62.966 68.421 0.00 0.00 0.00 6.46
1129 1171 4.436998 GAGGACAGTCGGCGGGTG 62.437 72.222 7.21 7.51 0.00 4.61
1143 1185 3.683937 GGTGCGGCAGTGGCAATT 61.684 61.111 17.80 0.00 42.92 2.32
1144 1186 2.339712 GTGCGGCAGTGGCAATTT 59.660 55.556 17.80 0.00 42.92 1.82
1145 1187 1.300853 GTGCGGCAGTGGCAATTTT 60.301 52.632 17.80 0.00 42.92 1.82
1146 1188 1.006337 TGCGGCAGTGGCAATTTTC 60.006 52.632 17.80 0.00 43.71 2.29
1147 1189 2.088178 GCGGCAGTGGCAATTTTCG 61.088 57.895 17.80 0.00 43.71 3.46
1148 1190 1.578926 CGGCAGTGGCAATTTTCGA 59.421 52.632 17.80 0.00 43.71 3.71
1149 1191 0.729140 CGGCAGTGGCAATTTTCGAC 60.729 55.000 17.80 0.00 43.71 4.20
1150 1192 0.729140 GGCAGTGGCAATTTTCGACG 60.729 55.000 12.58 0.00 43.71 5.12
1151 1193 0.237235 GCAGTGGCAATTTTCGACGA 59.763 50.000 0.00 0.00 40.72 4.20
1152 1194 1.135689 GCAGTGGCAATTTTCGACGAT 60.136 47.619 0.00 0.00 40.72 3.73
1153 1195 2.668279 GCAGTGGCAATTTTCGACGATT 60.668 45.455 0.00 0.00 40.72 3.34
1154 1196 2.910482 CAGTGGCAATTTTCGACGATTG 59.090 45.455 13.10 13.10 36.56 2.67
1155 1197 2.552315 AGTGGCAATTTTCGACGATTGT 59.448 40.909 16.80 0.00 36.03 2.71
1156 1198 3.004315 AGTGGCAATTTTCGACGATTGTT 59.996 39.130 16.80 0.00 36.03 2.83
1157 1199 3.733727 GTGGCAATTTTCGACGATTGTTT 59.266 39.130 16.80 0.00 36.03 2.83
1158 1200 4.208253 GTGGCAATTTTCGACGATTGTTTT 59.792 37.500 16.80 0.00 36.03 2.43
1159 1201 4.442733 TGGCAATTTTCGACGATTGTTTTC 59.557 37.500 16.80 8.55 36.03 2.29
1160 1202 4.442733 GGCAATTTTCGACGATTGTTTTCA 59.557 37.500 16.80 0.00 36.03 2.69
1161 1203 5.118510 GGCAATTTTCGACGATTGTTTTCAT 59.881 36.000 16.80 0.00 36.03 2.57
1162 1204 6.346518 GGCAATTTTCGACGATTGTTTTCATT 60.347 34.615 16.80 0.00 36.03 2.57
1163 1205 7.148885 GGCAATTTTCGACGATTGTTTTCATTA 60.149 33.333 16.80 0.00 36.03 1.90
1164 1206 8.372521 GCAATTTTCGACGATTGTTTTCATTAT 58.627 29.630 16.80 0.00 36.03 1.28
1165 1207 9.660825 CAATTTTCGACGATTGTTTTCATTATG 57.339 29.630 0.00 0.00 0.00 1.90
1166 1208 8.964420 ATTTTCGACGATTGTTTTCATTATGT 57.036 26.923 0.00 0.00 0.00 2.29
1167 1209 8.789881 TTTTCGACGATTGTTTTCATTATGTT 57.210 26.923 0.00 0.00 0.00 2.71
1168 1210 8.789881 TTTCGACGATTGTTTTCATTATGTTT 57.210 26.923 0.00 0.00 0.00 2.83
1169 1211 7.774224 TCGACGATTGTTTTCATTATGTTTG 57.226 32.000 0.00 0.00 0.00 2.93
1170 1212 7.356540 TCGACGATTGTTTTCATTATGTTTGT 58.643 30.769 0.00 0.00 0.00 2.83
1171 1213 7.322461 TCGACGATTGTTTTCATTATGTTTGTG 59.678 33.333 0.00 0.00 0.00 3.33
1172 1214 7.322461 CGACGATTGTTTTCATTATGTTTGTGA 59.678 33.333 0.00 0.00 0.00 3.58
1173 1215 8.280909 ACGATTGTTTTCATTATGTTTGTGAC 57.719 30.769 0.00 0.00 0.00 3.67
1174 1216 8.134895 ACGATTGTTTTCATTATGTTTGTGACT 58.865 29.630 0.00 0.00 0.00 3.41
1175 1217 8.967218 CGATTGTTTTCATTATGTTTGTGACTT 58.033 29.630 0.00 0.00 0.00 3.01
1177 1219 7.906611 TGTTTTCATTATGTTTGTGACTTCG 57.093 32.000 0.00 0.00 0.00 3.79
1178 1220 7.476667 TGTTTTCATTATGTTTGTGACTTCGT 58.523 30.769 0.00 0.00 0.00 3.85
1179 1221 7.971168 TGTTTTCATTATGTTTGTGACTTCGTT 59.029 29.630 0.00 0.00 0.00 3.85
1180 1222 7.906611 TTTCATTATGTTTGTGACTTCGTTG 57.093 32.000 0.00 0.00 0.00 4.10
1181 1223 5.448438 TCATTATGTTTGTGACTTCGTTGC 58.552 37.500 0.00 0.00 0.00 4.17
1182 1224 5.238432 TCATTATGTTTGTGACTTCGTTGCT 59.762 36.000 0.00 0.00 0.00 3.91
1183 1225 6.425417 TCATTATGTTTGTGACTTCGTTGCTA 59.575 34.615 0.00 0.00 0.00 3.49
1184 1226 3.936902 TGTTTGTGACTTCGTTGCTAC 57.063 42.857 0.00 0.00 0.00 3.58
1185 1227 3.527533 TGTTTGTGACTTCGTTGCTACT 58.472 40.909 0.00 0.00 0.00 2.57
1186 1228 4.684877 TGTTTGTGACTTCGTTGCTACTA 58.315 39.130 0.00 0.00 0.00 1.82
1187 1229 4.743151 TGTTTGTGACTTCGTTGCTACTAG 59.257 41.667 0.00 0.00 0.00 2.57
1188 1230 4.841443 TTGTGACTTCGTTGCTACTAGA 57.159 40.909 0.00 0.00 0.00 2.43
1189 1231 5.386958 TTGTGACTTCGTTGCTACTAGAT 57.613 39.130 0.00 0.00 0.00 1.98
1190 1232 5.386958 TGTGACTTCGTTGCTACTAGATT 57.613 39.130 0.00 0.00 0.00 2.40
1191 1233 5.399858 TGTGACTTCGTTGCTACTAGATTC 58.600 41.667 0.00 0.00 0.00 2.52
1192 1234 4.496183 GTGACTTCGTTGCTACTAGATTCG 59.504 45.833 0.00 0.00 0.00 3.34
1193 1235 4.393990 TGACTTCGTTGCTACTAGATTCGA 59.606 41.667 0.00 0.00 0.00 3.71
1194 1236 5.106436 TGACTTCGTTGCTACTAGATTCGAA 60.106 40.000 0.00 0.00 35.25 3.71
1195 1237 5.094134 ACTTCGTTGCTACTAGATTCGAAC 58.906 41.667 0.00 0.00 33.50 3.95
1196 1238 4.690184 TCGTTGCTACTAGATTCGAACA 57.310 40.909 0.00 0.00 0.00 3.18
1197 1239 4.409570 TCGTTGCTACTAGATTCGAACAC 58.590 43.478 0.00 0.00 0.00 3.32
1198 1240 4.155462 TCGTTGCTACTAGATTCGAACACT 59.845 41.667 0.00 5.95 0.00 3.55
1199 1241 4.263209 CGTTGCTACTAGATTCGAACACTG 59.737 45.833 0.00 1.77 0.00 3.66
1200 1242 5.162075 GTTGCTACTAGATTCGAACACTGT 58.838 41.667 0.00 7.13 0.00 3.55
1201 1243 6.320171 GTTGCTACTAGATTCGAACACTGTA 58.680 40.000 0.00 7.81 0.00 2.74
1202 1244 6.505044 TGCTACTAGATTCGAACACTGTAA 57.495 37.500 0.00 0.00 0.00 2.41
1203 1245 6.320171 TGCTACTAGATTCGAACACTGTAAC 58.680 40.000 0.00 5.49 0.00 2.50
1204 1246 6.072342 TGCTACTAGATTCGAACACTGTAACA 60.072 38.462 0.00 7.57 0.00 2.41
1205 1247 6.469595 GCTACTAGATTCGAACACTGTAACAG 59.530 42.308 0.00 0.00 37.52 3.16
1206 1248 6.570672 ACTAGATTCGAACACTGTAACAGA 57.429 37.500 0.00 0.00 35.18 3.41
1207 1249 6.613233 ACTAGATTCGAACACTGTAACAGAG 58.387 40.000 0.00 0.00 35.18 3.35
1208 1250 5.707242 AGATTCGAACACTGTAACAGAGA 57.293 39.130 0.00 0.00 35.18 3.10
1209 1251 6.085555 AGATTCGAACACTGTAACAGAGAA 57.914 37.500 0.00 0.00 35.18 2.87
1210 1252 6.153067 AGATTCGAACACTGTAACAGAGAAG 58.847 40.000 0.00 0.00 35.18 2.85
1211 1253 4.913335 TCGAACACTGTAACAGAGAAGT 57.087 40.909 0.00 0.00 35.18 3.01
1212 1254 6.381481 TTCGAACACTGTAACAGAGAAGTA 57.619 37.500 0.00 0.00 35.18 2.24
1213 1255 6.381481 TCGAACACTGTAACAGAGAAGTAA 57.619 37.500 0.00 0.00 35.18 2.24
1214 1256 6.798482 TCGAACACTGTAACAGAGAAGTAAA 58.202 36.000 0.00 0.00 35.18 2.01
1215 1257 7.431249 TCGAACACTGTAACAGAGAAGTAAAT 58.569 34.615 0.00 0.00 35.18 1.40
1216 1258 8.570488 TCGAACACTGTAACAGAGAAGTAAATA 58.430 33.333 0.00 0.00 35.18 1.40
1217 1259 9.188588 CGAACACTGTAACAGAGAAGTAAATAA 57.811 33.333 0.00 0.00 35.18 1.40
1243 1285 3.921969 CTCATGAGCTTGCGAGTTTAG 57.078 47.619 10.38 0.00 0.00 1.85
1244 1286 2.002586 TCATGAGCTTGCGAGTTTAGC 58.997 47.619 2.14 0.00 35.16 3.09
1246 1288 3.119137 TCATGAGCTTGCGAGTTTAGCTA 60.119 43.478 2.14 0.00 44.78 3.32
1247 1289 2.881074 TGAGCTTGCGAGTTTAGCTAG 58.119 47.619 2.14 0.00 44.78 3.42
1248 1290 2.492088 TGAGCTTGCGAGTTTAGCTAGA 59.508 45.455 2.14 0.00 44.78 2.43
1249 1291 3.131223 TGAGCTTGCGAGTTTAGCTAGAT 59.869 43.478 2.14 0.00 44.78 1.98
1250 1292 4.116238 GAGCTTGCGAGTTTAGCTAGATT 58.884 43.478 2.14 0.00 44.78 2.40
1251 1293 4.508662 AGCTTGCGAGTTTAGCTAGATTT 58.491 39.130 2.14 0.00 43.08 2.17
1252 1294 4.938226 AGCTTGCGAGTTTAGCTAGATTTT 59.062 37.500 2.14 0.00 43.08 1.82
1253 1295 5.064071 AGCTTGCGAGTTTAGCTAGATTTTC 59.936 40.000 2.14 0.00 43.08 2.29
1254 1296 5.450376 TTGCGAGTTTAGCTAGATTTTCG 57.550 39.130 0.00 9.79 35.28 3.46
1255 1297 4.491676 TGCGAGTTTAGCTAGATTTTCGT 58.508 39.130 13.39 0.00 35.28 3.85
1256 1298 4.927425 TGCGAGTTTAGCTAGATTTTCGTT 59.073 37.500 13.39 0.00 35.28 3.85
1257 1299 5.163992 TGCGAGTTTAGCTAGATTTTCGTTG 60.164 40.000 13.39 0.00 35.28 4.10
1258 1300 5.061808 GCGAGTTTAGCTAGATTTTCGTTGA 59.938 40.000 13.39 0.00 0.00 3.18
1259 1301 6.237861 GCGAGTTTAGCTAGATTTTCGTTGAT 60.238 38.462 13.39 0.00 0.00 2.57
1260 1302 7.674240 GCGAGTTTAGCTAGATTTTCGTTGATT 60.674 37.037 13.39 0.00 0.00 2.57
1261 1303 8.169268 CGAGTTTAGCTAGATTTTCGTTGATTT 58.831 33.333 0.00 0.00 0.00 2.17
1262 1304 9.479278 GAGTTTAGCTAGATTTTCGTTGATTTC 57.521 33.333 0.00 0.00 0.00 2.17
1263 1305 9.220767 AGTTTAGCTAGATTTTCGTTGATTTCT 57.779 29.630 0.00 0.00 0.00 2.52
1264 1306 9.267096 GTTTAGCTAGATTTTCGTTGATTTCTG 57.733 33.333 0.00 0.00 0.00 3.02
1265 1307 8.771920 TTAGCTAGATTTTCGTTGATTTCTGA 57.228 30.769 0.00 0.00 0.00 3.27
1266 1308 7.856145 AGCTAGATTTTCGTTGATTTCTGAT 57.144 32.000 0.00 0.00 0.00 2.90
1267 1309 8.273780 AGCTAGATTTTCGTTGATTTCTGATT 57.726 30.769 0.00 0.00 0.00 2.57
1268 1310 8.180267 AGCTAGATTTTCGTTGATTTCTGATTG 58.820 33.333 0.00 0.00 0.00 2.67
1269 1311 7.430502 GCTAGATTTTCGTTGATTTCTGATTGG 59.569 37.037 0.00 0.00 0.00 3.16
1270 1312 7.219484 AGATTTTCGTTGATTTCTGATTGGT 57.781 32.000 0.00 0.00 0.00 3.67
1271 1313 7.661040 AGATTTTCGTTGATTTCTGATTGGTT 58.339 30.769 0.00 0.00 0.00 3.67
1272 1314 8.143835 AGATTTTCGTTGATTTCTGATTGGTTT 58.856 29.630 0.00 0.00 0.00 3.27
1273 1315 9.405587 GATTTTCGTTGATTTCTGATTGGTTTA 57.594 29.630 0.00 0.00 0.00 2.01
1274 1316 9.757227 ATTTTCGTTGATTTCTGATTGGTTTAA 57.243 25.926 0.00 0.00 0.00 1.52
1275 1317 8.795786 TTTCGTTGATTTCTGATTGGTTTAAG 57.204 30.769 0.00 0.00 0.00 1.85
1276 1318 6.908825 TCGTTGATTTCTGATTGGTTTAAGG 58.091 36.000 0.00 0.00 0.00 2.69
1277 1319 6.712998 TCGTTGATTTCTGATTGGTTTAAGGA 59.287 34.615 0.00 0.00 0.00 3.36
1278 1320 7.229707 TCGTTGATTTCTGATTGGTTTAAGGAA 59.770 33.333 0.00 0.00 0.00 3.36
1279 1321 7.326063 CGTTGATTTCTGATTGGTTTAAGGAAC 59.674 37.037 0.00 0.00 37.53 3.62
1295 1337 9.758651 GTTTAAGGAACCTGTAAATGAAATTGT 57.241 29.630 0.00 0.00 31.83 2.71
1299 1341 9.927668 AAGGAACCTGTAAATGAAATTGTAATG 57.072 29.630 0.00 0.00 36.10 1.90
1300 1342 9.308000 AGGAACCTGTAAATGAAATTGTAATGA 57.692 29.630 0.00 0.00 36.10 2.57
1301 1343 9.353999 GGAACCTGTAAATGAAATTGTAATGAC 57.646 33.333 0.00 0.00 36.10 3.06
1302 1344 9.353999 GAACCTGTAAATGAAATTGTAATGACC 57.646 33.333 0.00 0.00 36.10 4.02
1303 1345 7.836842 ACCTGTAAATGAAATTGTAATGACCC 58.163 34.615 0.00 0.00 36.10 4.46
1304 1346 7.673926 ACCTGTAAATGAAATTGTAATGACCCT 59.326 33.333 0.00 0.00 36.10 4.34
1305 1347 8.190784 CCTGTAAATGAAATTGTAATGACCCTC 58.809 37.037 0.00 0.00 36.10 4.30
1306 1348 8.642935 TGTAAATGAAATTGTAATGACCCTCA 57.357 30.769 0.00 0.00 36.10 3.86
1307 1349 8.519526 TGTAAATGAAATTGTAATGACCCTCAC 58.480 33.333 0.00 0.00 36.10 3.51
1308 1350 7.537596 AAATGAAATTGTAATGACCCTCACA 57.462 32.000 0.00 0.00 36.10 3.58
1309 1351 7.537596 AATGAAATTGTAATGACCCTCACAA 57.462 32.000 0.00 0.00 33.44 3.33
1310 1352 6.968263 TGAAATTGTAATGACCCTCACAAA 57.032 33.333 0.00 0.00 34.79 2.83
1311 1353 6.744112 TGAAATTGTAATGACCCTCACAAAC 58.256 36.000 0.00 0.00 34.79 2.93
1312 1354 5.371115 AATTGTAATGACCCTCACAAACG 57.629 39.130 0.00 0.00 34.79 3.60
1313 1355 3.755112 TGTAATGACCCTCACAAACGA 57.245 42.857 0.00 0.00 0.00 3.85
1314 1356 4.280436 TGTAATGACCCTCACAAACGAT 57.720 40.909 0.00 0.00 0.00 3.73
1315 1357 4.000325 TGTAATGACCCTCACAAACGATG 59.000 43.478 0.00 0.00 0.00 3.84
1316 1358 2.859165 ATGACCCTCACAAACGATGT 57.141 45.000 0.00 0.00 45.34 3.06
1317 1359 3.973206 ATGACCCTCACAAACGATGTA 57.027 42.857 0.00 0.00 41.46 2.29
1318 1360 3.034721 TGACCCTCACAAACGATGTAC 57.965 47.619 0.00 0.00 41.46 2.90
1319 1361 2.631062 TGACCCTCACAAACGATGTACT 59.369 45.455 0.00 0.00 41.46 2.73
1320 1362 3.070446 TGACCCTCACAAACGATGTACTT 59.930 43.478 0.00 0.00 41.46 2.24
1321 1363 4.062991 GACCCTCACAAACGATGTACTTT 58.937 43.478 0.00 0.00 41.46 2.66
1322 1364 4.457466 ACCCTCACAAACGATGTACTTTT 58.543 39.130 0.00 0.00 41.46 2.27
1323 1365 4.885325 ACCCTCACAAACGATGTACTTTTT 59.115 37.500 0.00 0.00 41.46 1.94
1324 1366 6.056884 ACCCTCACAAACGATGTACTTTTTA 58.943 36.000 0.00 0.00 41.46 1.52
1325 1367 6.713450 ACCCTCACAAACGATGTACTTTTTAT 59.287 34.615 0.00 0.00 41.46 1.40
1326 1368 7.094933 ACCCTCACAAACGATGTACTTTTTATC 60.095 37.037 0.00 0.00 41.46 1.75
1327 1369 7.119262 CCCTCACAAACGATGTACTTTTTATCT 59.881 37.037 0.00 0.00 41.46 1.98
1328 1370 8.169268 CCTCACAAACGATGTACTTTTTATCTC 58.831 37.037 0.00 0.00 41.46 2.75
1329 1371 8.827177 TCACAAACGATGTACTTTTTATCTCT 57.173 30.769 0.00 0.00 41.46 3.10
1330 1372 9.917129 TCACAAACGATGTACTTTTTATCTCTA 57.083 29.630 0.00 0.00 41.46 2.43
1381 1423 7.654022 AAAAAGGTCAGAACTATGGTTTTCA 57.346 32.000 0.00 0.00 35.58 2.69
1382 1424 7.839680 AAAAGGTCAGAACTATGGTTTTCAT 57.160 32.000 0.00 0.00 39.78 2.57
1423 1465 3.894427 TGGCCTTTACTGCTTGAATTTGA 59.106 39.130 3.32 0.00 0.00 2.69
1433 1475 5.242393 ACTGCTTGAATTTGACAATAGCAGT 59.758 36.000 22.74 22.74 45.59 4.40
1442 1484 1.999735 GACAATAGCAGTGTTAGCGCA 59.000 47.619 11.47 0.00 37.01 6.09
1444 1486 1.062587 CAATAGCAGTGTTAGCGCACC 59.937 52.381 11.47 0.00 40.04 5.01
1453 1495 1.071814 TTAGCGCACCGTTCCCTTT 59.928 52.632 11.47 0.00 0.00 3.11
1593 1635 8.654485 TTTTAATGATTGGGCTATATGCATCT 57.346 30.769 0.19 0.00 45.15 2.90
1595 1637 8.654485 TTAATGATTGGGCTATATGCATCTTT 57.346 30.769 0.19 0.00 45.15 2.52
1601 1643 4.763279 TGGGCTATATGCATCTTTGATGTG 59.237 41.667 0.19 0.00 45.15 3.21
1663 1705 5.066246 CGGTTTAAACAAGTTTGGTCCACTA 59.934 40.000 19.57 0.00 34.23 2.74
1670 1714 1.346722 AGTTTGGTCCACTAACGGAGG 59.653 52.381 0.00 0.00 39.36 4.30
1700 1744 2.600388 CAACGAGGTTTGCTCACGA 58.400 52.632 0.00 0.00 0.00 4.35
1754 1798 1.184970 CGGCACCCCCAAAGATTTGT 61.185 55.000 4.71 0.00 36.45 2.83
1757 1801 2.168313 GGCACCCCCAAAGATTTGTATG 59.832 50.000 4.71 0.00 36.45 2.39
1946 2015 0.896940 CTGGTGCAAGATTGGCCACT 60.897 55.000 3.88 0.00 0.00 4.00
1990 2117 6.963242 CACTGCTATTTTGTACATAGTGCAAG 59.037 38.462 0.00 2.42 39.08 4.01
1991 2118 6.878923 ACTGCTATTTTGTACATAGTGCAAGA 59.121 34.615 0.00 0.00 39.08 3.02
1992 2119 7.554118 ACTGCTATTTTGTACATAGTGCAAGAT 59.446 33.333 0.00 8.52 39.08 2.40
1993 2120 7.919690 TGCTATTTTGTACATAGTGCAAGATC 58.080 34.615 7.14 0.00 39.08 2.75
2019 2146 3.766591 TGGCCACCACTTACAAATTATGG 59.233 43.478 0.00 0.00 36.46 2.74
2043 2170 6.996282 GGGGCTACTGCTATTTTCTTTACATA 59.004 38.462 0.00 0.00 39.59 2.29
2069 2196 5.709966 AGAATTCGCCACAATCTTAAAACC 58.290 37.500 0.00 0.00 0.00 3.27
2076 2203 4.083003 GCCACAATCTTAAAACCACATCGA 60.083 41.667 0.00 0.00 0.00 3.59
2080 2207 7.273381 CCACAATCTTAAAACCACATCGAAATC 59.727 37.037 0.00 0.00 0.00 2.17
2102 2229 8.523915 AATCCTATAATTGAACTCACATGCAA 57.476 30.769 0.00 0.00 0.00 4.08
2245 2372 0.473755 TCACACAGGCATCAACTGGT 59.526 50.000 0.00 0.00 40.23 4.00
2246 2373 1.696884 TCACACAGGCATCAACTGGTA 59.303 47.619 0.00 0.00 40.23 3.25
2247 2374 2.305635 TCACACAGGCATCAACTGGTAT 59.694 45.455 0.00 0.00 40.23 2.73
2248 2375 2.679837 CACACAGGCATCAACTGGTATC 59.320 50.000 0.00 0.00 40.23 2.24
2289 2420 6.717413 TCAATAACAACCACACGAACTAAAC 58.283 36.000 0.00 0.00 0.00 2.01
2324 2458 1.743252 GCTGCTTCCAACCTCTCGG 60.743 63.158 0.00 0.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 4.275936 GGTTTGTACTGTTCTTGTCTGCAT 59.724 41.667 0.00 0.00 0.00 3.96
34 35 5.760253 AGATGGTTTGTACTGTTCTTGTCTG 59.240 40.000 0.00 0.00 0.00 3.51
126 127 4.525996 TCTTCTCATGGTCAGAGAGAGAG 58.474 47.826 0.00 0.00 42.57 3.20
127 128 4.582973 TCTTCTCATGGTCAGAGAGAGA 57.417 45.455 0.00 0.00 42.57 3.10
128 129 4.706476 AGTTCTTCTCATGGTCAGAGAGAG 59.294 45.833 0.00 0.00 42.57 3.20
144 147 9.909644 TTCACTACTTGATTAGTACAGTTCTTC 57.090 33.333 0.00 0.00 38.33 2.87
223 227 5.169992 TCCACTTATATGATGGCATCCTG 57.830 43.478 23.92 10.14 35.94 3.86
292 331 5.690857 AGCGTAGAACTACACTTCAGAAAAC 59.309 40.000 11.65 0.00 35.87 2.43
386 428 6.982724 AGTTTGGTACCATACGCTTACTTATC 59.017 38.462 24.26 3.05 34.03 1.75
434 476 5.420258 CAAAACAATTTGCGACGATAAGG 57.580 39.130 0.00 0.00 39.50 2.69
479 521 8.125978 TCAAAAGATTATTCCATCAACTGCTT 57.874 30.769 0.00 0.00 0.00 3.91
502 544 8.780616 AGAATCTCTTCTGGATCTTAAGATCA 57.219 34.615 35.10 23.84 43.40 2.92
555 597 3.550431 CGCCCATCCGGATGAGGT 61.550 66.667 40.01 7.45 41.20 3.85
603 645 1.141881 CAATAGCAGAGGACGCCGT 59.858 57.895 0.00 0.00 0.00 5.68
614 656 1.811558 GCGGCAAGGAGATCAATAGCA 60.812 52.381 0.00 0.00 0.00 3.49
637 679 0.613260 TATTGCAAGAGGGCAGACGT 59.387 50.000 4.94 0.00 45.88 4.34
642 684 2.603075 AAACCTATTGCAAGAGGGCA 57.397 45.000 36.37 0.00 41.69 5.36
650 692 1.810151 GTGGAGCGAAAACCTATTGCA 59.190 47.619 0.00 0.00 0.00 4.08
655 697 8.570068 AATTTATAAAGTGGAGCGAAAACCTA 57.430 30.769 3.94 0.00 0.00 3.08
685 727 7.545265 GCAATGTATCAAAGCAATAAAGGTCAA 59.455 33.333 0.00 0.00 0.00 3.18
695 737 5.679382 GCTGTATGGCAATGTATCAAAGCAA 60.679 40.000 0.00 0.00 0.00 3.91
733 775 1.444119 GCCACACGAAGTTTGCCTGA 61.444 55.000 0.00 0.00 41.61 3.86
800 842 2.711542 CGGTAAAGGCCAGATCAAACT 58.288 47.619 5.01 0.00 0.00 2.66
819 861 4.550577 TGTATGGCAATGTATCAAAGCG 57.449 40.909 0.00 0.00 0.00 4.68
820 862 6.863126 GGTTATGTATGGCAATGTATCAAAGC 59.137 38.462 0.00 0.00 0.00 3.51
855 897 7.927629 ACGTTAAGTTTCACAACCATAGTTCTA 59.072 33.333 0.00 0.00 32.45 2.10
870 912 7.431084 TCAAAAGAAGCATCAACGTTAAGTTTC 59.569 33.333 0.00 7.76 42.02 2.78
872 914 6.691388 GTCAAAAGAAGCATCAACGTTAAGTT 59.309 34.615 0.00 0.00 45.45 2.66
873 915 6.199393 GTCAAAAGAAGCATCAACGTTAAGT 58.801 36.000 0.00 0.00 0.00 2.24
874 916 5.625311 GGTCAAAAGAAGCATCAACGTTAAG 59.375 40.000 0.00 0.00 0.00 1.85
875 917 5.066634 TGGTCAAAAGAAGCATCAACGTTAA 59.933 36.000 0.00 0.00 0.00 2.01
876 918 4.576873 TGGTCAAAAGAAGCATCAACGTTA 59.423 37.500 0.00 0.00 0.00 3.18
877 919 3.380004 TGGTCAAAAGAAGCATCAACGTT 59.620 39.130 0.00 0.00 0.00 3.99
878 920 2.948979 TGGTCAAAAGAAGCATCAACGT 59.051 40.909 0.00 0.00 0.00 3.99
879 921 3.300009 GTGGTCAAAAGAAGCATCAACG 58.700 45.455 0.00 0.00 0.00 4.10
880 922 3.003275 TCGTGGTCAAAAGAAGCATCAAC 59.997 43.478 0.00 0.00 0.00 3.18
881 923 3.003275 GTCGTGGTCAAAAGAAGCATCAA 59.997 43.478 0.00 0.00 0.00 2.57
882 924 2.548057 GTCGTGGTCAAAAGAAGCATCA 59.452 45.455 0.00 0.00 0.00 3.07
883 925 2.095718 GGTCGTGGTCAAAAGAAGCATC 60.096 50.000 0.00 0.00 0.00 3.91
884 926 1.880027 GGTCGTGGTCAAAAGAAGCAT 59.120 47.619 0.00 0.00 0.00 3.79
885 927 1.134220 AGGTCGTGGTCAAAAGAAGCA 60.134 47.619 0.00 0.00 0.00 3.91
886 928 1.264288 CAGGTCGTGGTCAAAAGAAGC 59.736 52.381 0.00 0.00 0.00 3.86
887 929 1.264288 GCAGGTCGTGGTCAAAAGAAG 59.736 52.381 0.00 0.00 0.00 2.85
888 930 1.134220 AGCAGGTCGTGGTCAAAAGAA 60.134 47.619 0.00 0.00 27.31 2.52
889 931 0.468226 AGCAGGTCGTGGTCAAAAGA 59.532 50.000 0.00 0.00 27.31 2.52
890 932 1.308998 AAGCAGGTCGTGGTCAAAAG 58.691 50.000 0.00 0.00 35.15 2.27
891 933 2.489971 CTAAGCAGGTCGTGGTCAAAA 58.510 47.619 0.00 0.00 35.15 2.44
892 934 1.270625 CCTAAGCAGGTCGTGGTCAAA 60.271 52.381 0.00 0.00 35.15 2.69
893 935 0.320374 CCTAAGCAGGTCGTGGTCAA 59.680 55.000 0.00 0.00 35.15 3.18
894 936 1.541310 CCCTAAGCAGGTCGTGGTCA 61.541 60.000 0.00 0.00 40.79 4.02
895 937 1.218316 CCCTAAGCAGGTCGTGGTC 59.782 63.158 0.00 0.00 40.79 4.02
896 938 2.291043 CCCCTAAGCAGGTCGTGGT 61.291 63.158 0.00 0.00 40.79 4.16
897 939 2.584608 CCCCTAAGCAGGTCGTGG 59.415 66.667 0.00 0.00 40.79 4.94
898 940 2.125106 GCCCCTAAGCAGGTCGTG 60.125 66.667 0.00 0.00 40.79 4.35
899 941 2.606519 TGCCCCTAAGCAGGTCGT 60.607 61.111 0.00 0.00 40.79 4.34
900 942 2.125106 GTGCCCCTAAGCAGGTCG 60.125 66.667 0.00 0.00 45.14 4.79
901 943 1.972660 ATCGTGCCCCTAAGCAGGTC 61.973 60.000 6.17 0.00 45.14 3.85
902 944 1.995626 ATCGTGCCCCTAAGCAGGT 60.996 57.895 6.17 0.00 45.14 4.00
903 945 1.524621 CATCGTGCCCCTAAGCAGG 60.525 63.158 0.01 0.01 45.14 4.85
904 946 1.524621 CCATCGTGCCCCTAAGCAG 60.525 63.158 0.00 0.00 45.14 4.24
905 947 2.589540 CCATCGTGCCCCTAAGCA 59.410 61.111 0.00 0.00 41.46 3.91
906 948 2.203209 CCCATCGTGCCCCTAAGC 60.203 66.667 0.00 0.00 0.00 3.09
907 949 2.510906 CCCCATCGTGCCCCTAAG 59.489 66.667 0.00 0.00 0.00 2.18
908 950 3.093835 CCCCCATCGTGCCCCTAA 61.094 66.667 0.00 0.00 0.00 2.69
909 951 4.424867 ACCCCCATCGTGCCCCTA 62.425 66.667 0.00 0.00 0.00 3.53
913 955 3.879180 AAACCACCCCCATCGTGCC 62.879 63.158 0.00 0.00 0.00 5.01
914 956 1.906333 AAAACCACCCCCATCGTGC 60.906 57.895 0.00 0.00 0.00 5.34
915 957 0.538516 TCAAAACCACCCCCATCGTG 60.539 55.000 0.00 0.00 0.00 4.35
916 958 0.251165 CTCAAAACCACCCCCATCGT 60.251 55.000 0.00 0.00 0.00 3.73
917 959 0.037590 TCTCAAAACCACCCCCATCG 59.962 55.000 0.00 0.00 0.00 3.84
918 960 1.354368 TCTCTCAAAACCACCCCCATC 59.646 52.381 0.00 0.00 0.00 3.51
919 961 1.455822 TCTCTCAAAACCACCCCCAT 58.544 50.000 0.00 0.00 0.00 4.00
920 962 1.075374 CATCTCTCAAAACCACCCCCA 59.925 52.381 0.00 0.00 0.00 4.96
921 963 1.354368 TCATCTCTCAAAACCACCCCC 59.646 52.381 0.00 0.00 0.00 5.40
922 964 2.879103 TCATCTCTCAAAACCACCCC 57.121 50.000 0.00 0.00 0.00 4.95
923 965 5.509670 CCTTTTTCATCTCTCAAAACCACCC 60.510 44.000 0.00 0.00 0.00 4.61
924 966 5.069119 ACCTTTTTCATCTCTCAAAACCACC 59.931 40.000 0.00 0.00 0.00 4.61
925 967 6.149129 ACCTTTTTCATCTCTCAAAACCAC 57.851 37.500 0.00 0.00 0.00 4.16
926 968 6.490040 CCTACCTTTTTCATCTCTCAAAACCA 59.510 38.462 0.00 0.00 0.00 3.67
927 969 6.490381 ACCTACCTTTTTCATCTCTCAAAACC 59.510 38.462 0.00 0.00 0.00 3.27
928 970 7.511959 ACCTACCTTTTTCATCTCTCAAAAC 57.488 36.000 0.00 0.00 0.00 2.43
929 971 8.533569 AAACCTACCTTTTTCATCTCTCAAAA 57.466 30.769 0.00 0.00 0.00 2.44
930 972 9.807921 ATAAACCTACCTTTTTCATCTCTCAAA 57.192 29.630 0.00 0.00 0.00 2.69
931 973 9.449719 GATAAACCTACCTTTTTCATCTCTCAA 57.550 33.333 0.00 0.00 0.00 3.02
932 974 7.764443 CGATAAACCTACCTTTTTCATCTCTCA 59.236 37.037 0.00 0.00 0.00 3.27
933 975 7.764901 ACGATAAACCTACCTTTTTCATCTCTC 59.235 37.037 0.00 0.00 0.00 3.20
934 976 7.549488 CACGATAAACCTACCTTTTTCATCTCT 59.451 37.037 0.00 0.00 0.00 3.10
935 977 7.201617 CCACGATAAACCTACCTTTTTCATCTC 60.202 40.741 0.00 0.00 0.00 2.75
936 978 6.598064 CCACGATAAACCTACCTTTTTCATCT 59.402 38.462 0.00 0.00 0.00 2.90
937 979 6.183360 CCCACGATAAACCTACCTTTTTCATC 60.183 42.308 0.00 0.00 0.00 2.92
938 980 5.650703 CCCACGATAAACCTACCTTTTTCAT 59.349 40.000 0.00 0.00 0.00 2.57
939 981 5.005094 CCCACGATAAACCTACCTTTTTCA 58.995 41.667 0.00 0.00 0.00 2.69
940 982 5.247862 TCCCACGATAAACCTACCTTTTTC 58.752 41.667 0.00 0.00 0.00 2.29
941 983 5.245584 TCCCACGATAAACCTACCTTTTT 57.754 39.130 0.00 0.00 0.00 1.94
942 984 4.324022 CCTCCCACGATAAACCTACCTTTT 60.324 45.833 0.00 0.00 0.00 2.27
943 985 3.199289 CCTCCCACGATAAACCTACCTTT 59.801 47.826 0.00 0.00 0.00 3.11
944 986 2.770232 CCTCCCACGATAAACCTACCTT 59.230 50.000 0.00 0.00 0.00 3.50
945 987 2.395619 CCTCCCACGATAAACCTACCT 58.604 52.381 0.00 0.00 0.00 3.08
946 988 1.415289 CCCTCCCACGATAAACCTACC 59.585 57.143 0.00 0.00 0.00 3.18
947 989 2.391678 TCCCTCCCACGATAAACCTAC 58.608 52.381 0.00 0.00 0.00 3.18
948 990 2.767960 GTTCCCTCCCACGATAAACCTA 59.232 50.000 0.00 0.00 0.00 3.08
949 991 1.558294 GTTCCCTCCCACGATAAACCT 59.442 52.381 0.00 0.00 0.00 3.50
950 992 1.741394 CGTTCCCTCCCACGATAAACC 60.741 57.143 0.00 0.00 38.76 3.27
951 993 1.648504 CGTTCCCTCCCACGATAAAC 58.351 55.000 0.00 0.00 38.76 2.01
952 994 0.538118 CCGTTCCCTCCCACGATAAA 59.462 55.000 0.00 0.00 38.76 1.40
953 995 1.332144 CCCGTTCCCTCCCACGATAA 61.332 60.000 0.00 0.00 38.76 1.75
954 996 1.759299 CCCGTTCCCTCCCACGATA 60.759 63.158 0.00 0.00 38.76 2.92
955 997 3.081409 CCCGTTCCCTCCCACGAT 61.081 66.667 0.00 0.00 38.76 3.73
956 998 3.831727 TTCCCGTTCCCTCCCACGA 62.832 63.158 0.00 0.00 38.76 4.35
957 999 3.310860 CTTCCCGTTCCCTCCCACG 62.311 68.421 0.00 0.00 36.12 4.94
958 1000 1.272554 ATCTTCCCGTTCCCTCCCAC 61.273 60.000 0.00 0.00 0.00 4.61
959 1001 0.549169 AATCTTCCCGTTCCCTCCCA 60.549 55.000 0.00 0.00 0.00 4.37
960 1002 0.107165 CAATCTTCCCGTTCCCTCCC 60.107 60.000 0.00 0.00 0.00 4.30
961 1003 0.909623 TCAATCTTCCCGTTCCCTCC 59.090 55.000 0.00 0.00 0.00 4.30
962 1004 1.555533 AGTCAATCTTCCCGTTCCCTC 59.444 52.381 0.00 0.00 0.00 4.30
963 1005 1.657804 AGTCAATCTTCCCGTTCCCT 58.342 50.000 0.00 0.00 0.00 4.20
964 1006 3.840124 ATAGTCAATCTTCCCGTTCCC 57.160 47.619 0.00 0.00 0.00 3.97
965 1007 3.312697 GCAATAGTCAATCTTCCCGTTCC 59.687 47.826 0.00 0.00 0.00 3.62
966 1008 3.001330 CGCAATAGTCAATCTTCCCGTTC 59.999 47.826 0.00 0.00 0.00 3.95
967 1009 2.936498 CGCAATAGTCAATCTTCCCGTT 59.064 45.455 0.00 0.00 0.00 4.44
968 1010 2.550978 CGCAATAGTCAATCTTCCCGT 58.449 47.619 0.00 0.00 0.00 5.28
969 1011 1.261619 GCGCAATAGTCAATCTTCCCG 59.738 52.381 0.30 0.00 0.00 5.14
970 1012 2.288666 TGCGCAATAGTCAATCTTCCC 58.711 47.619 8.16 0.00 0.00 3.97
971 1013 3.198068 TCTGCGCAATAGTCAATCTTCC 58.802 45.455 13.05 0.00 0.00 3.46
972 1014 4.272018 ACATCTGCGCAATAGTCAATCTTC 59.728 41.667 13.05 0.00 0.00 2.87
973 1015 4.034858 CACATCTGCGCAATAGTCAATCTT 59.965 41.667 13.05 0.00 0.00 2.40
974 1016 3.558829 CACATCTGCGCAATAGTCAATCT 59.441 43.478 13.05 0.00 0.00 2.40
975 1017 3.310774 ACACATCTGCGCAATAGTCAATC 59.689 43.478 13.05 0.00 0.00 2.67
976 1018 3.273434 ACACATCTGCGCAATAGTCAAT 58.727 40.909 13.05 0.00 0.00 2.57
977 1019 2.698803 ACACATCTGCGCAATAGTCAA 58.301 42.857 13.05 0.00 0.00 3.18
978 1020 2.385013 ACACATCTGCGCAATAGTCA 57.615 45.000 13.05 0.00 0.00 3.41
979 1021 2.672874 TCAACACATCTGCGCAATAGTC 59.327 45.455 13.05 0.00 0.00 2.59
980 1022 2.698803 TCAACACATCTGCGCAATAGT 58.301 42.857 13.05 7.03 0.00 2.12
981 1023 3.547413 CCATCAACACATCTGCGCAATAG 60.547 47.826 13.05 6.30 0.00 1.73
982 1024 2.355444 CCATCAACACATCTGCGCAATA 59.645 45.455 13.05 2.35 0.00 1.90
983 1025 1.133598 CCATCAACACATCTGCGCAAT 59.866 47.619 13.05 5.33 0.00 3.56
984 1026 0.522626 CCATCAACACATCTGCGCAA 59.477 50.000 13.05 2.72 0.00 4.85
985 1027 1.925415 GCCATCAACACATCTGCGCA 61.925 55.000 10.98 10.98 0.00 6.09
986 1028 1.226491 GCCATCAACACATCTGCGC 60.226 57.895 0.00 0.00 0.00 6.09
987 1029 1.061411 CGCCATCAACACATCTGCG 59.939 57.895 0.00 0.00 0.00 5.18
988 1030 1.026182 TCCGCCATCAACACATCTGC 61.026 55.000 0.00 0.00 0.00 4.26
989 1031 1.399440 CTTCCGCCATCAACACATCTG 59.601 52.381 0.00 0.00 0.00 2.90
990 1032 1.742761 CTTCCGCCATCAACACATCT 58.257 50.000 0.00 0.00 0.00 2.90
991 1033 0.099436 GCTTCCGCCATCAACACATC 59.901 55.000 0.00 0.00 0.00 3.06
992 1034 2.183409 GCTTCCGCCATCAACACAT 58.817 52.632 0.00 0.00 0.00 3.21
993 1035 3.667087 GCTTCCGCCATCAACACA 58.333 55.556 0.00 0.00 0.00 3.72
1003 1045 2.094762 TTAAGAGTTGAGGCTTCCGC 57.905 50.000 0.00 0.00 0.00 5.54
1004 1046 5.393962 CAAATTTAAGAGTTGAGGCTTCCG 58.606 41.667 0.00 0.00 35.41 4.30
1005 1047 5.243954 ACCAAATTTAAGAGTTGAGGCTTCC 59.756 40.000 0.00 0.00 35.41 3.46
1006 1048 6.332735 ACCAAATTTAAGAGTTGAGGCTTC 57.667 37.500 0.00 0.00 35.41 3.86
1007 1049 9.528489 TTATACCAAATTTAAGAGTTGAGGCTT 57.472 29.630 0.00 0.00 35.41 4.35
1008 1050 8.957466 GTTATACCAAATTTAAGAGTTGAGGCT 58.043 33.333 0.00 0.00 35.41 4.58
1009 1051 8.736244 TGTTATACCAAATTTAAGAGTTGAGGC 58.264 33.333 0.00 0.00 35.41 4.70
1016 1058 9.221775 GCGTCAATGTTATACCAAATTTAAGAG 57.778 33.333 0.00 0.00 0.00 2.85
1017 1059 8.731605 TGCGTCAATGTTATACCAAATTTAAGA 58.268 29.630 0.00 0.00 0.00 2.10
1018 1060 8.903570 TGCGTCAATGTTATACCAAATTTAAG 57.096 30.769 0.00 0.00 0.00 1.85
1019 1061 9.692749 TTTGCGTCAATGTTATACCAAATTTAA 57.307 25.926 0.00 0.00 0.00 1.52
1020 1062 9.347934 CTTTGCGTCAATGTTATACCAAATTTA 57.652 29.630 0.00 0.00 0.00 1.40
1021 1063 7.330700 CCTTTGCGTCAATGTTATACCAAATTT 59.669 33.333 0.00 0.00 0.00 1.82
1022 1064 6.811170 CCTTTGCGTCAATGTTATACCAAATT 59.189 34.615 0.00 0.00 0.00 1.82
1023 1065 6.329496 CCTTTGCGTCAATGTTATACCAAAT 58.671 36.000 0.00 0.00 0.00 2.32
1024 1066 5.336055 CCCTTTGCGTCAATGTTATACCAAA 60.336 40.000 0.00 0.00 0.00 3.28
1025 1067 4.156922 CCCTTTGCGTCAATGTTATACCAA 59.843 41.667 0.00 0.00 0.00 3.67
1026 1068 3.692101 CCCTTTGCGTCAATGTTATACCA 59.308 43.478 0.00 0.00 0.00 3.25
1027 1069 3.488553 GCCCTTTGCGTCAATGTTATACC 60.489 47.826 0.00 0.00 0.00 2.73
1028 1070 3.691498 GCCCTTTGCGTCAATGTTATAC 58.309 45.455 0.00 0.00 0.00 1.47
1030 1072 2.939460 GCCCTTTGCGTCAATGTTAT 57.061 45.000 0.00 0.00 0.00 1.89
1041 1083 0.668535 GATTACATCCCGCCCTTTGC 59.331 55.000 0.00 0.00 0.00 3.68
1042 1084 0.944386 CGATTACATCCCGCCCTTTG 59.056 55.000 0.00 0.00 0.00 2.77
1043 1085 0.544697 ACGATTACATCCCGCCCTTT 59.455 50.000 0.00 0.00 0.00 3.11
1044 1086 0.106149 GACGATTACATCCCGCCCTT 59.894 55.000 0.00 0.00 0.00 3.95
1045 1087 0.759436 AGACGATTACATCCCGCCCT 60.759 55.000 0.00 0.00 0.00 5.19
1046 1088 0.106149 AAGACGATTACATCCCGCCC 59.894 55.000 0.00 0.00 0.00 6.13
1047 1089 2.806608 TAAGACGATTACATCCCGCC 57.193 50.000 0.00 0.00 0.00 6.13
1048 1090 6.963049 AATAATAAGACGATTACATCCCGC 57.037 37.500 0.00 0.00 0.00 6.13
1049 1091 9.635520 AGTTAATAATAAGACGATTACATCCCG 57.364 33.333 0.00 0.00 0.00 5.14
1054 1096 9.669353 GTCCGAGTTAATAATAAGACGATTACA 57.331 33.333 0.00 0.00 0.00 2.41
1055 1097 9.669353 TGTCCGAGTTAATAATAAGACGATTAC 57.331 33.333 0.00 0.00 0.00 1.89
1057 1099 9.028185 GTTGTCCGAGTTAATAATAAGACGATT 57.972 33.333 0.00 0.00 0.00 3.34
1058 1100 7.650903 GGTTGTCCGAGTTAATAATAAGACGAT 59.349 37.037 0.00 0.00 0.00 3.73
1059 1101 6.974622 GGTTGTCCGAGTTAATAATAAGACGA 59.025 38.462 0.00 0.00 0.00 4.20
1060 1102 6.976925 AGGTTGTCCGAGTTAATAATAAGACG 59.023 38.462 0.00 0.00 39.05 4.18
1061 1103 7.224167 CCAGGTTGTCCGAGTTAATAATAAGAC 59.776 40.741 0.00 0.00 39.05 3.01
1062 1104 7.124599 TCCAGGTTGTCCGAGTTAATAATAAGA 59.875 37.037 0.00 0.00 39.05 2.10
1063 1105 7.270047 TCCAGGTTGTCCGAGTTAATAATAAG 58.730 38.462 0.00 0.00 39.05 1.73
1064 1106 7.185318 TCCAGGTTGTCCGAGTTAATAATAA 57.815 36.000 0.00 0.00 39.05 1.40
1065 1107 6.183360 CCTCCAGGTTGTCCGAGTTAATAATA 60.183 42.308 0.00 0.00 39.05 0.98
1066 1108 5.396436 CCTCCAGGTTGTCCGAGTTAATAAT 60.396 44.000 0.00 0.00 39.05 1.28
1067 1109 4.081309 CCTCCAGGTTGTCCGAGTTAATAA 60.081 45.833 0.00 0.00 39.05 1.40
1068 1110 3.449737 CCTCCAGGTTGTCCGAGTTAATA 59.550 47.826 0.00 0.00 39.05 0.98
1069 1111 2.236395 CCTCCAGGTTGTCCGAGTTAAT 59.764 50.000 0.00 0.00 39.05 1.40
1070 1112 1.621814 CCTCCAGGTTGTCCGAGTTAA 59.378 52.381 0.00 0.00 39.05 2.01
1071 1113 1.263356 CCTCCAGGTTGTCCGAGTTA 58.737 55.000 0.00 0.00 39.05 2.24
1072 1114 2.058675 CCTCCAGGTTGTCCGAGTT 58.941 57.895 0.00 0.00 39.05 3.01
1073 1115 3.793060 CCTCCAGGTTGTCCGAGT 58.207 61.111 0.00 0.00 39.05 4.18
1083 1125 3.392285 TCATGGTATCAATCACCTCCAGG 59.608 47.826 0.00 0.00 36.96 4.45
1084 1126 4.694760 TCATGGTATCAATCACCTCCAG 57.305 45.455 0.00 0.00 36.96 3.86
1085 1127 4.721274 TCTTCATGGTATCAATCACCTCCA 59.279 41.667 0.00 0.00 36.96 3.86
1086 1128 5.296151 TCTTCATGGTATCAATCACCTCC 57.704 43.478 0.00 0.00 36.96 4.30
1087 1129 5.235186 CGTTCTTCATGGTATCAATCACCTC 59.765 44.000 0.00 0.00 36.96 3.85
1088 1130 5.118990 CGTTCTTCATGGTATCAATCACCT 58.881 41.667 0.00 0.00 36.96 4.00
1089 1131 4.273480 CCGTTCTTCATGGTATCAATCACC 59.727 45.833 0.00 0.00 36.54 4.02
1090 1132 5.116180 TCCGTTCTTCATGGTATCAATCAC 58.884 41.667 0.00 0.00 32.49 3.06
1091 1133 5.351948 TCCGTTCTTCATGGTATCAATCA 57.648 39.130 0.00 0.00 32.49 2.57
1092 1134 4.752101 CCTCCGTTCTTCATGGTATCAATC 59.248 45.833 0.00 0.00 32.49 2.67
1093 1135 4.408921 TCCTCCGTTCTTCATGGTATCAAT 59.591 41.667 0.00 0.00 32.49 2.57
1094 1136 3.772572 TCCTCCGTTCTTCATGGTATCAA 59.227 43.478 0.00 0.00 32.49 2.57
1095 1137 3.132289 GTCCTCCGTTCTTCATGGTATCA 59.868 47.826 0.00 0.00 32.49 2.15
1096 1138 3.132289 TGTCCTCCGTTCTTCATGGTATC 59.868 47.826 0.00 0.00 32.49 2.24
1097 1139 3.104512 TGTCCTCCGTTCTTCATGGTAT 58.895 45.455 0.00 0.00 32.49 2.73
1098 1140 2.496070 CTGTCCTCCGTTCTTCATGGTA 59.504 50.000 0.00 0.00 32.49 3.25
1099 1141 1.276421 CTGTCCTCCGTTCTTCATGGT 59.724 52.381 0.00 0.00 32.49 3.55
1100 1142 1.276421 ACTGTCCTCCGTTCTTCATGG 59.724 52.381 0.00 0.00 0.00 3.66
1101 1143 2.611518 GACTGTCCTCCGTTCTTCATG 58.388 52.381 0.00 0.00 0.00 3.07
1102 1144 1.202582 CGACTGTCCTCCGTTCTTCAT 59.797 52.381 1.55 0.00 0.00 2.57
1103 1145 0.596577 CGACTGTCCTCCGTTCTTCA 59.403 55.000 1.55 0.00 0.00 3.02
1104 1146 0.109226 CCGACTGTCCTCCGTTCTTC 60.109 60.000 1.55 0.00 0.00 2.87
1105 1147 1.965219 CCGACTGTCCTCCGTTCTT 59.035 57.895 1.55 0.00 0.00 2.52
1106 1148 2.637383 GCCGACTGTCCTCCGTTCT 61.637 63.158 1.55 0.00 0.00 3.01
1107 1149 2.126031 GCCGACTGTCCTCCGTTC 60.126 66.667 1.55 0.00 0.00 3.95
1108 1150 4.052229 CGCCGACTGTCCTCCGTT 62.052 66.667 1.55 0.00 0.00 4.44
1112 1154 4.436998 CACCCGCCGACTGTCCTC 62.437 72.222 1.55 0.00 0.00 3.71
1126 1168 2.713927 AAAATTGCCACTGCCGCACC 62.714 55.000 0.00 0.00 35.56 5.01
1127 1169 1.284297 GAAAATTGCCACTGCCGCAC 61.284 55.000 0.00 0.00 35.56 5.34
1128 1170 1.006337 GAAAATTGCCACTGCCGCA 60.006 52.632 0.00 0.00 36.33 5.69
1129 1171 2.088178 CGAAAATTGCCACTGCCGC 61.088 57.895 0.00 0.00 36.33 6.53
1130 1172 0.729140 GTCGAAAATTGCCACTGCCG 60.729 55.000 0.00 0.00 36.33 5.69
1131 1173 0.729140 CGTCGAAAATTGCCACTGCC 60.729 55.000 0.00 0.00 36.33 4.85
1132 1174 0.237235 TCGTCGAAAATTGCCACTGC 59.763 50.000 0.00 0.00 38.26 4.40
1133 1175 2.900122 ATCGTCGAAAATTGCCACTG 57.100 45.000 0.00 0.00 0.00 3.66
1134 1176 2.552315 ACAATCGTCGAAAATTGCCACT 59.448 40.909 16.80 0.46 36.54 4.00
1135 1177 2.928694 ACAATCGTCGAAAATTGCCAC 58.071 42.857 16.80 0.00 36.54 5.01
1136 1178 3.634568 AACAATCGTCGAAAATTGCCA 57.365 38.095 16.80 0.00 36.54 4.92
1137 1179 4.442733 TGAAAACAATCGTCGAAAATTGCC 59.557 37.500 16.80 7.92 36.54 4.52
1138 1180 5.553692 TGAAAACAATCGTCGAAAATTGC 57.446 34.783 16.80 5.61 36.54 3.56
1139 1181 9.660825 CATAATGAAAACAATCGTCGAAAATTG 57.339 29.630 15.77 15.77 38.54 2.32
1140 1182 9.405587 ACATAATGAAAACAATCGTCGAAAATT 57.594 25.926 0.00 0.00 0.00 1.82
1141 1183 8.964420 ACATAATGAAAACAATCGTCGAAAAT 57.036 26.923 0.00 0.00 0.00 1.82
1142 1184 8.789881 AACATAATGAAAACAATCGTCGAAAA 57.210 26.923 0.00 0.00 0.00 2.29
1143 1185 8.686418 CAAACATAATGAAAACAATCGTCGAAA 58.314 29.630 0.00 0.00 0.00 3.46
1144 1186 7.858382 ACAAACATAATGAAAACAATCGTCGAA 59.142 29.630 0.00 0.00 0.00 3.71
1145 1187 7.322461 CACAAACATAATGAAAACAATCGTCGA 59.678 33.333 0.00 0.00 0.00 4.20
1146 1188 7.322461 TCACAAACATAATGAAAACAATCGTCG 59.678 33.333 0.00 0.00 0.00 5.12
1147 1189 8.417176 GTCACAAACATAATGAAAACAATCGTC 58.583 33.333 0.00 0.00 0.00 4.20
1148 1190 8.134895 AGTCACAAACATAATGAAAACAATCGT 58.865 29.630 0.00 0.00 0.00 3.73
1149 1191 8.506140 AGTCACAAACATAATGAAAACAATCG 57.494 30.769 0.00 0.00 0.00 3.34
1151 1193 8.967218 CGAAGTCACAAACATAATGAAAACAAT 58.033 29.630 0.00 0.00 0.00 2.71
1152 1194 7.971168 ACGAAGTCACAAACATAATGAAAACAA 59.029 29.630 0.00 0.00 29.74 2.83
1153 1195 7.476667 ACGAAGTCACAAACATAATGAAAACA 58.523 30.769 0.00 0.00 29.74 2.83
1154 1196 7.908193 ACGAAGTCACAAACATAATGAAAAC 57.092 32.000 0.00 0.00 29.74 2.43
1155 1197 7.043722 GCAACGAAGTCACAAACATAATGAAAA 60.044 33.333 0.00 0.00 45.00 2.29
1156 1198 6.416455 GCAACGAAGTCACAAACATAATGAAA 59.584 34.615 0.00 0.00 45.00 2.69
1157 1199 5.912396 GCAACGAAGTCACAAACATAATGAA 59.088 36.000 0.00 0.00 45.00 2.57
1158 1200 5.238432 AGCAACGAAGTCACAAACATAATGA 59.762 36.000 0.00 0.00 45.00 2.57
1159 1201 5.451908 AGCAACGAAGTCACAAACATAATG 58.548 37.500 0.00 0.00 45.00 1.90
1160 1202 5.689383 AGCAACGAAGTCACAAACATAAT 57.311 34.783 0.00 0.00 45.00 1.28
1161 1203 5.756347 AGTAGCAACGAAGTCACAAACATAA 59.244 36.000 0.00 0.00 45.00 1.90
1162 1204 5.294356 AGTAGCAACGAAGTCACAAACATA 58.706 37.500 0.00 0.00 45.00 2.29
1163 1205 4.127171 AGTAGCAACGAAGTCACAAACAT 58.873 39.130 0.00 0.00 45.00 2.71
1164 1206 3.527533 AGTAGCAACGAAGTCACAAACA 58.472 40.909 0.00 0.00 45.00 2.83
1165 1207 4.980434 TCTAGTAGCAACGAAGTCACAAAC 59.020 41.667 0.00 0.00 45.00 2.93
1166 1208 5.190992 TCTAGTAGCAACGAAGTCACAAA 57.809 39.130 0.00 0.00 45.00 2.83
1167 1209 4.841443 TCTAGTAGCAACGAAGTCACAA 57.159 40.909 0.00 0.00 45.00 3.33
1168 1210 5.386958 AATCTAGTAGCAACGAAGTCACA 57.613 39.130 0.00 0.00 45.00 3.58
1169 1211 4.496183 CGAATCTAGTAGCAACGAAGTCAC 59.504 45.833 0.00 0.00 45.00 3.67
1170 1212 4.393990 TCGAATCTAGTAGCAACGAAGTCA 59.606 41.667 0.00 0.00 45.00 3.41
1171 1213 4.906423 TCGAATCTAGTAGCAACGAAGTC 58.094 43.478 0.00 0.00 45.00 3.01
1173 1215 5.003590 GTGTTCGAATCTAGTAGCAACGAAG 59.996 44.000 18.03 0.00 38.55 3.79
1174 1216 4.855388 GTGTTCGAATCTAGTAGCAACGAA 59.145 41.667 0.00 15.49 36.28 3.85
1175 1217 4.155462 AGTGTTCGAATCTAGTAGCAACGA 59.845 41.667 0.00 7.80 0.00 3.85
1176 1218 4.263209 CAGTGTTCGAATCTAGTAGCAACG 59.737 45.833 0.00 0.00 0.00 4.10
1177 1219 5.162075 ACAGTGTTCGAATCTAGTAGCAAC 58.838 41.667 0.00 0.00 0.00 4.17
1178 1220 5.386958 ACAGTGTTCGAATCTAGTAGCAA 57.613 39.130 0.00 0.00 0.00 3.91
1179 1221 6.072342 TGTTACAGTGTTCGAATCTAGTAGCA 60.072 38.462 0.00 8.40 0.00 3.49
1180 1222 6.320171 TGTTACAGTGTTCGAATCTAGTAGC 58.680 40.000 0.00 6.00 0.00 3.58
1181 1223 7.749808 TCTGTTACAGTGTTCGAATCTAGTAG 58.250 38.462 12.41 0.00 32.61 2.57
1182 1224 7.605309 TCTCTGTTACAGTGTTCGAATCTAGTA 59.395 37.037 12.41 0.31 32.61 1.82
1183 1225 6.430308 TCTCTGTTACAGTGTTCGAATCTAGT 59.570 38.462 12.41 1.32 32.61 2.57
1184 1226 6.843208 TCTCTGTTACAGTGTTCGAATCTAG 58.157 40.000 12.41 0.00 32.61 2.43
1185 1227 6.812879 TCTCTGTTACAGTGTTCGAATCTA 57.187 37.500 12.41 0.00 32.61 1.98
1186 1228 5.707242 TCTCTGTTACAGTGTTCGAATCT 57.293 39.130 12.41 0.15 32.61 2.40
1187 1229 5.921408 ACTTCTCTGTTACAGTGTTCGAATC 59.079 40.000 12.41 0.00 32.61 2.52
1188 1230 5.844004 ACTTCTCTGTTACAGTGTTCGAAT 58.156 37.500 12.41 0.00 32.61 3.34
1189 1231 5.258456 ACTTCTCTGTTACAGTGTTCGAA 57.742 39.130 12.41 0.00 32.61 3.71
1190 1232 4.913335 ACTTCTCTGTTACAGTGTTCGA 57.087 40.909 12.41 0.54 32.61 3.71
1191 1233 7.639162 ATTTACTTCTCTGTTACAGTGTTCG 57.361 36.000 12.41 5.75 32.61 3.95
1223 1265 2.030213 GCTAAACTCGCAAGCTCATGAG 59.970 50.000 18.84 18.84 33.40 2.90
1224 1266 2.002586 GCTAAACTCGCAAGCTCATGA 58.997 47.619 0.00 0.00 33.40 3.07
1225 1267 2.005451 AGCTAAACTCGCAAGCTCATG 58.995 47.619 0.00 0.00 42.89 3.07
1226 1268 2.393271 AGCTAAACTCGCAAGCTCAT 57.607 45.000 0.00 0.00 42.89 2.90
1227 1269 2.492088 TCTAGCTAAACTCGCAAGCTCA 59.508 45.455 0.00 0.00 42.89 4.26
1228 1270 3.152261 TCTAGCTAAACTCGCAAGCTC 57.848 47.619 0.00 0.00 42.89 4.09
1230 1272 4.866682 AAATCTAGCTAAACTCGCAAGC 57.133 40.909 0.00 0.00 36.48 4.01
1231 1273 5.062308 ACGAAAATCTAGCTAAACTCGCAAG 59.938 40.000 0.00 0.00 0.00 4.01
1232 1274 4.927425 ACGAAAATCTAGCTAAACTCGCAA 59.073 37.500 0.00 0.00 0.00 4.85
1233 1275 4.491676 ACGAAAATCTAGCTAAACTCGCA 58.508 39.130 0.00 0.00 0.00 5.10
1234 1276 5.061808 TCAACGAAAATCTAGCTAAACTCGC 59.938 40.000 0.00 0.00 0.00 5.03
1235 1277 6.627690 TCAACGAAAATCTAGCTAAACTCG 57.372 37.500 0.00 2.22 0.00 4.18
1236 1278 9.479278 GAAATCAACGAAAATCTAGCTAAACTC 57.521 33.333 0.00 0.00 0.00 3.01
1237 1279 9.220767 AGAAATCAACGAAAATCTAGCTAAACT 57.779 29.630 0.00 0.00 0.00 2.66
1238 1280 9.267096 CAGAAATCAACGAAAATCTAGCTAAAC 57.733 33.333 0.00 0.00 0.00 2.01
1239 1281 9.214957 TCAGAAATCAACGAAAATCTAGCTAAA 57.785 29.630 0.00 0.00 0.00 1.85
1240 1282 8.771920 TCAGAAATCAACGAAAATCTAGCTAA 57.228 30.769 0.00 0.00 0.00 3.09
1241 1283 8.948631 ATCAGAAATCAACGAAAATCTAGCTA 57.051 30.769 0.00 0.00 0.00 3.32
1242 1284 7.856145 ATCAGAAATCAACGAAAATCTAGCT 57.144 32.000 0.00 0.00 0.00 3.32
1243 1285 7.430502 CCAATCAGAAATCAACGAAAATCTAGC 59.569 37.037 0.00 0.00 0.00 3.42
1244 1286 8.454106 ACCAATCAGAAATCAACGAAAATCTAG 58.546 33.333 0.00 0.00 0.00 2.43
1245 1287 8.335532 ACCAATCAGAAATCAACGAAAATCTA 57.664 30.769 0.00 0.00 0.00 1.98
1246 1288 7.219484 ACCAATCAGAAATCAACGAAAATCT 57.781 32.000 0.00 0.00 0.00 2.40
1247 1289 7.873739 AACCAATCAGAAATCAACGAAAATC 57.126 32.000 0.00 0.00 0.00 2.17
1248 1290 9.757227 TTAAACCAATCAGAAATCAACGAAAAT 57.243 25.926 0.00 0.00 0.00 1.82
1249 1291 9.243637 CTTAAACCAATCAGAAATCAACGAAAA 57.756 29.630 0.00 0.00 0.00 2.29
1250 1292 7.865385 CCTTAAACCAATCAGAAATCAACGAAA 59.135 33.333 0.00 0.00 0.00 3.46
1251 1293 7.229707 TCCTTAAACCAATCAGAAATCAACGAA 59.770 33.333 0.00 0.00 0.00 3.85
1252 1294 6.712998 TCCTTAAACCAATCAGAAATCAACGA 59.287 34.615 0.00 0.00 0.00 3.85
1253 1295 6.908825 TCCTTAAACCAATCAGAAATCAACG 58.091 36.000 0.00 0.00 0.00 4.10
1254 1296 8.520835 GTTCCTTAAACCAATCAGAAATCAAC 57.479 34.615 0.00 0.00 31.20 3.18
1269 1311 9.758651 ACAATTTCATTTACAGGTTCCTTAAAC 57.241 29.630 0.00 0.00 37.12 2.01
1273 1315 9.927668 CATTACAATTTCATTTACAGGTTCCTT 57.072 29.630 0.00 0.00 0.00 3.36
1274 1316 9.308000 TCATTACAATTTCATTTACAGGTTCCT 57.692 29.630 0.00 0.00 0.00 3.36
1275 1317 9.353999 GTCATTACAATTTCATTTACAGGTTCC 57.646 33.333 0.00 0.00 0.00 3.62
1276 1318 9.353999 GGTCATTACAATTTCATTTACAGGTTC 57.646 33.333 0.00 0.00 0.00 3.62
1277 1319 8.311109 GGGTCATTACAATTTCATTTACAGGTT 58.689 33.333 0.00 0.00 0.00 3.50
1278 1320 7.673926 AGGGTCATTACAATTTCATTTACAGGT 59.326 33.333 0.00 0.00 0.00 4.00
1279 1321 8.066612 AGGGTCATTACAATTTCATTTACAGG 57.933 34.615 0.00 0.00 0.00 4.00
1280 1322 8.739039 TGAGGGTCATTACAATTTCATTTACAG 58.261 33.333 0.00 0.00 0.00 2.74
1281 1323 8.519526 GTGAGGGTCATTACAATTTCATTTACA 58.480 33.333 0.00 0.00 0.00 2.41
1282 1324 8.519526 TGTGAGGGTCATTACAATTTCATTTAC 58.480 33.333 0.00 0.00 0.00 2.01
1283 1325 8.642935 TGTGAGGGTCATTACAATTTCATTTA 57.357 30.769 0.00 0.00 0.00 1.40
1284 1326 7.537596 TGTGAGGGTCATTACAATTTCATTT 57.462 32.000 0.00 0.00 0.00 2.32
1285 1327 7.537596 TTGTGAGGGTCATTACAATTTCATT 57.462 32.000 0.00 0.00 0.00 2.57
1286 1328 7.378181 GTTTGTGAGGGTCATTACAATTTCAT 58.622 34.615 0.00 0.00 33.56 2.57
1287 1329 6.514212 CGTTTGTGAGGGTCATTACAATTTCA 60.514 38.462 0.00 0.00 33.56 2.69
1288 1330 5.856455 CGTTTGTGAGGGTCATTACAATTTC 59.144 40.000 0.00 0.00 33.56 2.17
1289 1331 5.533154 TCGTTTGTGAGGGTCATTACAATTT 59.467 36.000 0.00 0.00 33.56 1.82
1290 1332 5.067273 TCGTTTGTGAGGGTCATTACAATT 58.933 37.500 0.00 0.00 33.56 2.32
1291 1333 4.647611 TCGTTTGTGAGGGTCATTACAAT 58.352 39.130 0.00 0.00 33.56 2.71
1292 1334 4.074627 TCGTTTGTGAGGGTCATTACAA 57.925 40.909 0.00 0.00 0.00 2.41
1293 1335 3.755112 TCGTTTGTGAGGGTCATTACA 57.245 42.857 0.00 0.00 0.00 2.41
1294 1336 4.000988 ACATCGTTTGTGAGGGTCATTAC 58.999 43.478 0.00 0.00 37.11 1.89
1295 1337 4.280436 ACATCGTTTGTGAGGGTCATTA 57.720 40.909 0.00 0.00 37.11 1.90
1296 1338 3.140325 ACATCGTTTGTGAGGGTCATT 57.860 42.857 0.00 0.00 37.11 2.57
1297 1339 2.859165 ACATCGTTTGTGAGGGTCAT 57.141 45.000 0.00 0.00 37.11 3.06
1298 1340 2.631062 AGTACATCGTTTGTGAGGGTCA 59.369 45.455 0.00 0.00 39.48 4.02
1299 1341 3.314541 AGTACATCGTTTGTGAGGGTC 57.685 47.619 0.00 0.00 39.48 4.46
1300 1342 3.764237 AAGTACATCGTTTGTGAGGGT 57.236 42.857 0.00 0.00 39.48 4.34
1301 1343 5.432885 AAAAAGTACATCGTTTGTGAGGG 57.567 39.130 0.00 0.00 39.48 4.30
1302 1344 8.029642 AGATAAAAAGTACATCGTTTGTGAGG 57.970 34.615 0.00 0.00 39.48 3.86
1303 1345 8.926710 AGAGATAAAAAGTACATCGTTTGTGAG 58.073 33.333 0.00 0.00 39.48 3.51
1304 1346 8.827177 AGAGATAAAAAGTACATCGTTTGTGA 57.173 30.769 0.00 0.00 39.48 3.58
1357 1399 7.654022 TGAAAACCATAGTTCTGACCTTTTT 57.346 32.000 0.00 0.00 34.19 1.94
1358 1400 7.839680 ATGAAAACCATAGTTCTGACCTTTT 57.160 32.000 0.00 0.00 34.19 2.27
1359 1401 7.287696 ACAATGAAAACCATAGTTCTGACCTTT 59.712 33.333 0.00 0.00 34.19 3.11
1360 1402 6.777580 ACAATGAAAACCATAGTTCTGACCTT 59.222 34.615 0.00 0.00 34.19 3.50
1361 1403 6.207417 CACAATGAAAACCATAGTTCTGACCT 59.793 38.462 0.00 0.00 34.19 3.85
1362 1404 6.206634 TCACAATGAAAACCATAGTTCTGACC 59.793 38.462 0.00 0.00 34.19 4.02
1363 1405 7.173218 TCTCACAATGAAAACCATAGTTCTGAC 59.827 37.037 0.00 0.00 34.19 3.51
1364 1406 7.223584 TCTCACAATGAAAACCATAGTTCTGA 58.776 34.615 0.00 0.00 34.19 3.27
1365 1407 7.439157 TCTCACAATGAAAACCATAGTTCTG 57.561 36.000 0.00 0.00 34.19 3.02
1366 1408 8.352942 GTTTCTCACAATGAAAACCATAGTTCT 58.647 33.333 0.00 0.00 35.54 3.01
1367 1409 8.352942 AGTTTCTCACAATGAAAACCATAGTTC 58.647 33.333 0.00 0.00 35.54 3.01
1368 1410 8.237811 AGTTTCTCACAATGAAAACCATAGTT 57.762 30.769 0.00 0.00 35.54 2.24
1369 1411 7.502226 TGAGTTTCTCACAATGAAAACCATAGT 59.498 33.333 0.00 0.00 35.39 2.12
1370 1412 7.874940 TGAGTTTCTCACAATGAAAACCATAG 58.125 34.615 0.00 0.00 35.39 2.23
1371 1413 7.815840 TGAGTTTCTCACAATGAAAACCATA 57.184 32.000 0.00 0.00 35.39 2.74
1372 1414 6.713762 TGAGTTTCTCACAATGAAAACCAT 57.286 33.333 0.00 0.00 35.39 3.55
1373 1415 6.320926 TCATGAGTTTCTCACAATGAAAACCA 59.679 34.615 1.44 0.00 43.63 3.67
1374 1416 6.738114 TCATGAGTTTCTCACAATGAAAACC 58.262 36.000 1.44 0.00 43.63 3.27
1375 1417 8.295288 AGATCATGAGTTTCTCACAATGAAAAC 58.705 33.333 0.09 7.77 43.63 2.43
1376 1418 8.294577 CAGATCATGAGTTTCTCACAATGAAAA 58.705 33.333 0.09 0.00 43.63 2.29
1377 1419 7.094506 CCAGATCATGAGTTTCTCACAATGAAA 60.095 37.037 0.09 0.00 43.63 2.69
1378 1420 6.373495 CCAGATCATGAGTTTCTCACAATGAA 59.627 38.462 0.09 0.00 43.63 2.57
1379 1421 5.878669 CCAGATCATGAGTTTCTCACAATGA 59.121 40.000 0.09 3.35 43.63 2.57
1380 1422 5.448768 GCCAGATCATGAGTTTCTCACAATG 60.449 44.000 0.09 0.00 43.63 2.82
1381 1423 4.639310 GCCAGATCATGAGTTTCTCACAAT 59.361 41.667 0.09 0.00 43.63 2.71
1382 1424 4.005650 GCCAGATCATGAGTTTCTCACAA 58.994 43.478 0.09 0.00 43.63 3.33
1423 1465 1.732259 GTGCGCTAACACTGCTATTGT 59.268 47.619 9.73 0.00 37.58 2.71
1433 1475 2.357760 GGGAACGGTGCGCTAACA 60.358 61.111 9.73 0.00 0.00 2.41
1453 1495 2.951642 CTCCAAAAGCAACACCTTCAGA 59.048 45.455 0.00 0.00 0.00 3.27
1461 1503 1.757682 ACGGTTCTCCAAAAGCAACA 58.242 45.000 0.00 0.00 0.00 3.33
1579 1621 4.763793 ACACATCAAAGATGCATATAGCCC 59.236 41.667 0.00 0.00 44.83 5.19
1610 1652 5.016051 AGCAACGACATGATATCAAGAGT 57.984 39.130 14.59 11.04 0.00 3.24
1700 1744 2.184322 CATCTACTGGTGGCGCGT 59.816 61.111 8.43 0.00 0.00 6.01
1719 1763 0.673956 GCCGAAGTCTTCTTCCACCC 60.674 60.000 10.81 0.00 45.02 4.61
1772 1816 5.390387 ACCCTTACAAAAGCATCCTTACAA 58.610 37.500 0.00 0.00 0.00 2.41
1803 1847 6.764085 GTGCCAAAACCCTTACAAAAGTATTT 59.236 34.615 0.00 0.00 42.41 1.40
1833 1901 4.530875 TGGCCAAACACATCCAAATTTTT 58.469 34.783 0.61 0.00 0.00 1.94
1836 1904 3.853355 TTGGCCAAACACATCCAAATT 57.147 38.095 17.98 0.00 35.83 1.82
1972 2097 7.792374 ATCGATCTTGCACTATGTACAAAAT 57.208 32.000 0.00 0.00 0.00 1.82
1990 2117 1.940613 GTAAGTGGTGGCCAATCGATC 59.059 52.381 7.24 0.00 34.18 3.69
1991 2118 1.280710 TGTAAGTGGTGGCCAATCGAT 59.719 47.619 7.24 0.00 34.18 3.59
1992 2119 0.687920 TGTAAGTGGTGGCCAATCGA 59.312 50.000 7.24 0.00 34.18 3.59
1993 2120 1.529226 TTGTAAGTGGTGGCCAATCG 58.471 50.000 7.24 0.00 34.18 3.34
2019 2146 6.944234 ATGTAAAGAAAATAGCAGTAGCCC 57.056 37.500 0.00 0.00 43.56 5.19
2043 2170 7.170828 GGTTTTAAGATTGTGGCGAATTCTTTT 59.829 33.333 3.52 0.00 0.00 2.27
2052 2179 3.634568 TGTGGTTTTAAGATTGTGGCG 57.365 42.857 0.00 0.00 0.00 5.69
2069 2196 9.045223 TGAGTTCAATTATAGGATTTCGATGTG 57.955 33.333 0.00 0.00 0.00 3.21
2076 2203 8.523915 TGCATGTGAGTTCAATTATAGGATTT 57.476 30.769 0.00 0.00 0.00 2.17
2080 2207 9.590451 AAAATTGCATGTGAGTTCAATTATAGG 57.410 29.630 7.01 0.00 37.94 2.57
2102 2229 9.649167 CAGAATTTCTGCCTTCATTCTTAAAAT 57.351 29.630 13.20 0.00 37.72 1.82
2289 2420 2.878935 GCAGCCAGGATCATTATGGGAG 60.879 54.545 0.00 0.00 34.52 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.