Multiple sequence alignment - TraesCS2A01G193800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G193800 chr2A 100.000 7158 0 0 1 7158 161956724 161949567 0.000000e+00 13219.0
1 TraesCS2A01G193800 chr2A 80.198 202 35 4 1885 2086 236837307 236837503 5.790000e-31 147.0
2 TraesCS2A01G193800 chr2A 96.610 59 2 0 5618 5676 161951047 161950989 1.640000e-16 99.0
3 TraesCS2A01G193800 chr2A 96.610 59 2 0 5678 5736 161951107 161951049 1.640000e-16 99.0
4 TraesCS2A01G193800 chr2A 95.745 47 2 0 6338 6384 560782213 560782259 7.700000e-10 76.8
5 TraesCS2A01G193800 chr2D 89.604 2501 180 31 1 2462 139023593 139026052 0.000000e+00 3105.0
6 TraesCS2A01G193800 chr2D 94.343 1485 71 9 2459 3941 139026154 139027627 0.000000e+00 2265.0
7 TraesCS2A01G193800 chr2D 91.323 1164 63 19 5683 6829 139029269 139030411 0.000000e+00 1555.0
8 TraesCS2A01G193800 chr2D 87.101 845 78 13 4839 5676 139028499 139029319 0.000000e+00 928.0
9 TraesCS2A01G193800 chr2D 77.098 882 127 46 3975 4830 139027628 139028460 2.370000e-119 440.0
10 TraesCS2A01G193800 chr2D 82.449 245 40 3 1891 2134 430625749 430625507 2.020000e-50 211.0
11 TraesCS2A01G193800 chr2D 79.703 202 36 4 1885 2086 255618982 255618786 2.690000e-29 141.0
12 TraesCS2A01G193800 chr2D 87.179 78 10 0 3799 3876 372929756 372929679 9.890000e-14 89.8
13 TraesCS2A01G193800 chr2D 90.909 66 6 0 3809 3874 394525138 394525203 9.890000e-14 89.8
14 TraesCS2A01G193800 chr2D 96.000 50 2 0 7109 7158 35562513 35562464 1.650000e-11 82.4
15 TraesCS2A01G193800 chr2D 100.000 28 0 0 4233 4260 12920188 12920161 1.300000e-02 52.8
16 TraesCS2A01G193800 chr2B 93.805 1485 72 9 2459 3941 197683324 197684790 0.000000e+00 2215.0
17 TraesCS2A01G193800 chr2B 87.881 1477 100 34 5683 7107 197686431 197687880 0.000000e+00 1663.0
18 TraesCS2A01G193800 chr2B 88.294 1307 106 22 704 1997 197681575 197682847 0.000000e+00 1522.0
19 TraesCS2A01G193800 chr2B 86.423 847 73 17 4839 5676 197685668 197686481 0.000000e+00 889.0
20 TraesCS2A01G193800 chr2B 95.288 382 18 0 2081 2462 197682863 197683244 2.210000e-169 606.0
21 TraesCS2A01G193800 chr2B 83.358 679 89 11 1 660 649462699 649462026 2.210000e-169 606.0
22 TraesCS2A01G193800 chr2B 77.438 882 130 39 3975 4830 197684791 197685629 5.060000e-126 462.0
23 TraesCS2A01G193800 chr2B 83.673 245 36 2 1891 2134 508959628 508959387 2.010000e-55 228.0
24 TraesCS2A01G193800 chr2B 87.342 79 9 1 3809 3886 466165246 466165324 9.890000e-14 89.8
25 TraesCS2A01G193800 chr2B 86.250 80 10 1 3799 3878 442520232 442520154 1.280000e-12 86.1
26 TraesCS2A01G193800 chr5D 86.086 654 73 9 3 642 254330993 254330344 0.000000e+00 688.0
27 TraesCS2A01G193800 chr5D 85.220 636 66 16 1 611 264881853 264881221 4.710000e-176 628.0
28 TraesCS2A01G193800 chr5D 97.826 46 1 0 6338 6383 472231998 472231953 5.950000e-11 80.5
29 TraesCS2A01G193800 chr5D 95.455 44 2 0 6338 6381 394101586 394101629 3.580000e-08 71.3
30 TraesCS2A01G193800 chr5D 100.000 29 0 0 4233 4261 473346596 473346568 4.000000e-03 54.7
31 TraesCS2A01G193800 chr1B 85.380 684 71 15 1 658 249630828 249631508 0.000000e+00 682.0
32 TraesCS2A01G193800 chr1B 86.154 130 16 2 1896 2024 429700237 429700109 9.680000e-29 139.0
33 TraesCS2A01G193800 chr1B 87.654 81 10 0 3798 3878 565664634 565664554 2.130000e-15 95.3
34 TraesCS2A01G193800 chr1B 94.118 34 2 0 4231 4264 446264013 446263980 1.300000e-02 52.8
35 TraesCS2A01G193800 chr1B 96.774 31 1 0 630 660 670845172 670845202 1.300000e-02 52.8
36 TraesCS2A01G193800 chr7D 83.886 664 88 14 3 658 339602708 339603360 3.670000e-172 616.0
37 TraesCS2A01G193800 chr7D 91.228 57 4 1 6338 6394 426776992 426776937 7.700000e-10 76.8
38 TraesCS2A01G193800 chr4D 83.284 682 87 15 1 660 125234218 125233542 2.860000e-168 603.0
39 TraesCS2A01G193800 chr4D 79.191 173 29 6 6843 7012 385485521 385485689 5.870000e-21 113.0
40 TraesCS2A01G193800 chr4D 100.000 29 0 0 4233 4261 124010665 124010637 4.000000e-03 54.7
41 TraesCS2A01G193800 chr6B 85.106 611 64 13 2 590 60582649 60583254 3.700000e-167 599.0
42 TraesCS2A01G193800 chr6B 97.826 46 1 0 6338 6383 641873751 641873796 5.950000e-11 80.5
43 TraesCS2A01G193800 chr6B 89.831 59 4 2 6338 6395 504587157 504587214 2.770000e-09 75.0
44 TraesCS2A01G193800 chr6B 92.000 50 4 0 7109 7158 435027996 435027947 3.580000e-08 71.3
45 TraesCS2A01G193800 chr6B 100.000 28 0 0 4233 4260 300959939 300959912 1.300000e-02 52.8
46 TraesCS2A01G193800 chr5B 83.113 681 89 6 1 658 249554290 249554967 1.330000e-166 597.0
47 TraesCS2A01G193800 chr5B 80.524 267 41 6 1885 2142 485912069 485912333 2.040000e-45 195.0
48 TraesCS2A01G193800 chr5B 95.833 48 2 0 6338 6385 322205106 322205059 2.140000e-10 78.7
49 TraesCS2A01G193800 chr6D 82.703 688 79 27 1 660 82133345 82134020 6.230000e-160 575.0
50 TraesCS2A01G193800 chr6D 83.725 639 67 23 1 611 395523825 395523196 2.900000e-158 569.0
51 TraesCS2A01G193800 chr4B 88.940 217 23 1 445 661 427297848 427297633 4.260000e-67 267.0
52 TraesCS2A01G193800 chr4B 81.651 218 37 3 445 662 514507449 514507663 2.050000e-40 178.0
53 TraesCS2A01G193800 chr1D 85.169 236 29 5 426 658 216040249 216040481 3.340000e-58 237.0
54 TraesCS2A01G193800 chr1D 85.612 139 18 2 1885 2022 317590905 317590768 2.080000e-30 145.0
55 TraesCS2A01G193800 chr1D 86.420 81 7 3 3799 3875 317439523 317439603 1.280000e-12 86.1
56 TraesCS2A01G193800 chr1D 87.500 48 3 3 4216 4263 305539465 305539421 1.300000e-02 52.8
57 TraesCS2A01G193800 chr5A 83.142 261 34 8 1887 2142 445134161 445133906 5.590000e-56 230.0
58 TraesCS2A01G193800 chr5A 94.643 56 3 0 3644 3699 667304888 667304833 3.560000e-13 87.9
59 TraesCS2A01G193800 chr6A 86.082 194 23 4 468 660 461778751 461778941 9.410000e-49 206.0
60 TraesCS2A01G193800 chr6A 92.453 53 3 1 6338 6389 496389842 496389790 2.770000e-09 75.0
61 TraesCS2A01G193800 chr6A 100.000 30 0 0 4236 4265 107226005 107226034 1.000000e-03 56.5
62 TraesCS2A01G193800 chr6A 100.000 28 0 0 4231 4258 592434700 592434673 1.300000e-02 52.8
63 TraesCS2A01G193800 chr1A 87.654 81 6 3 3799 3875 398460919 398460999 2.750000e-14 91.6
64 TraesCS2A01G193800 chr3A 85.000 80 9 2 3645 3723 549616726 549616649 2.140000e-10 78.7
65 TraesCS2A01G193800 chr3A 87.302 63 5 3 6339 6401 638201893 638201952 1.290000e-07 69.4
66 TraesCS2A01G193800 chr7B 78.226 124 21 6 1966 2086 424571537 424571657 2.770000e-09 75.0
67 TraesCS2A01G193800 chr3D 85.915 71 7 2 3645 3714 107075457 107075525 9.960000e-09 73.1
68 TraesCS2A01G193800 chr3B 85.915 71 7 2 3645 3714 157925023 157925091 9.960000e-09 73.1
69 TraesCS2A01G193800 chr4A 100.000 28 0 0 4236 4263 571592480 571592507 1.300000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G193800 chr2A 161949567 161956724 7157 True 13219.000000 13219 100.000000 1 7158 1 chr2A.!!$R1 7157
1 TraesCS2A01G193800 chr2D 139023593 139030411 6818 False 1658.600000 3105 87.893800 1 6829 5 chr2D.!!$F2 6828
2 TraesCS2A01G193800 chr2B 197681575 197687880 6305 False 1226.166667 2215 88.188167 704 7107 6 chr2B.!!$F2 6403
3 TraesCS2A01G193800 chr2B 649462026 649462699 673 True 606.000000 606 83.358000 1 660 1 chr2B.!!$R3 659
4 TraesCS2A01G193800 chr5D 254330344 254330993 649 True 688.000000 688 86.086000 3 642 1 chr5D.!!$R1 639
5 TraesCS2A01G193800 chr5D 264881221 264881853 632 True 628.000000 628 85.220000 1 611 1 chr5D.!!$R2 610
6 TraesCS2A01G193800 chr1B 249630828 249631508 680 False 682.000000 682 85.380000 1 658 1 chr1B.!!$F1 657
7 TraesCS2A01G193800 chr7D 339602708 339603360 652 False 616.000000 616 83.886000 3 658 1 chr7D.!!$F1 655
8 TraesCS2A01G193800 chr4D 125233542 125234218 676 True 603.000000 603 83.284000 1 660 1 chr4D.!!$R2 659
9 TraesCS2A01G193800 chr6B 60582649 60583254 605 False 599.000000 599 85.106000 2 590 1 chr6B.!!$F1 588
10 TraesCS2A01G193800 chr5B 249554290 249554967 677 False 597.000000 597 83.113000 1 658 1 chr5B.!!$F1 657
11 TraesCS2A01G193800 chr6D 82133345 82134020 675 False 575.000000 575 82.703000 1 660 1 chr6D.!!$F1 659
12 TraesCS2A01G193800 chr6D 395523196 395523825 629 True 569.000000 569 83.725000 1 611 1 chr6D.!!$R1 610

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
573 603 0.320374 CGTGGCTGGGAACTACTTCA 59.680 55.0 0.00 0.0 0.00 3.02 F
979 1019 0.900647 CTCCACACTCTCCCCGTTCT 60.901 60.0 0.00 0.0 0.00 3.01 F
1645 1689 0.178967 TGGCCTGATTTTGGTGAGCA 60.179 50.0 3.32 0.0 0.00 4.26 F
2587 2755 0.407139 AGGCTTGGGCATCTGTTCTT 59.593 50.0 0.00 0.0 40.87 2.52 F
3774 3945 0.178767 AGCAGGAATGCTCGCATGTA 59.821 50.0 4.99 0.0 42.12 2.29 F
4469 4655 0.033504 GGCAGGTGAGAAGTGACGAA 59.966 55.0 0.00 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1496 1538 0.321653 AGCCACAAGCCTTTCTACCG 60.322 55.0 0.00 0.00 45.47 4.02 R
2686 2854 0.178301 GGGAAAGAGAGCTTACCCCG 59.822 60.0 0.00 0.00 37.37 5.73 R
3558 3727 0.107703 TGAACCAGCCAGCTATTCCG 60.108 55.0 11.34 0.00 0.00 4.30 R
4008 4179 0.033781 TGGAAGCTTGCACAATTGGC 59.966 50.0 17.55 10.82 0.00 4.52 R
4734 4950 0.095935 CTTTGCTGCAGTCGATTCCG 59.904 55.0 16.64 0.00 37.07 4.30 R
6270 6517 0.032017 AGGACTATCCCTGCCGACTT 60.032 55.0 0.00 0.00 37.19 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
367 371 4.671590 TCGACTCCCGCCAGTCCA 62.672 66.667 6.44 0.00 39.90 4.02
477 505 3.147595 TGGTAGCCGCTGATCGCT 61.148 61.111 2.16 3.50 36.73 4.93
570 600 1.542187 GGACGTGGCTGGGAACTACT 61.542 60.000 0.00 0.00 0.00 2.57
573 603 0.320374 CGTGGCTGGGAACTACTTCA 59.680 55.000 0.00 0.00 0.00 3.02
592 622 1.538629 CCCCCAAGGCCCAAAATGT 60.539 57.895 0.00 0.00 0.00 2.71
598 630 2.994417 GGCCCAAAATGTGCCGGA 60.994 61.111 5.05 0.00 35.08 5.14
611 643 2.746277 CCGGACGAAGGGCCAAAG 60.746 66.667 6.18 0.00 0.00 2.77
660 694 4.355437 CGAACGAGTGAAGATGCTCTTAT 58.645 43.478 0.00 0.00 36.73 1.73
665 699 2.139118 GTGAAGATGCTCTTATCGCCC 58.861 52.381 0.00 0.00 36.73 6.13
690 724 2.979814 TGATGGTCTATGTTCACGGG 57.020 50.000 0.00 0.00 0.00 5.28
713 747 2.223688 CCACGCAGGTTTCATGTCAAAA 60.224 45.455 0.00 0.00 0.00 2.44
714 748 3.443037 CACGCAGGTTTCATGTCAAAAA 58.557 40.909 0.00 0.00 0.00 1.94
729 763 8.568794 TCATGTCAAAAATTGTTATCAACCGTA 58.431 29.630 0.00 0.00 36.33 4.02
752 788 7.095774 CGTATTCCTATATCCCTTTTTGTGACG 60.096 40.741 0.00 0.00 0.00 4.35
787 823 2.793278 ACCCTTTGTCACGCAAAATC 57.207 45.000 0.00 0.00 45.35 2.17
788 824 1.339929 ACCCTTTGTCACGCAAAATCC 59.660 47.619 0.00 0.00 45.35 3.01
804 840 1.302907 ATCCATTGCCAGGTCCTCTT 58.697 50.000 0.00 0.00 0.00 2.85
821 857 4.947147 TGCCATTATCGCGCCCCC 62.947 66.667 0.00 0.00 0.00 5.40
822 858 4.947147 GCCATTATCGCGCCCCCA 62.947 66.667 0.00 0.00 0.00 4.96
823 859 2.669569 CCATTATCGCGCCCCCAG 60.670 66.667 0.00 0.00 0.00 4.45
825 861 4.643387 ATTATCGCGCCCCCAGCC 62.643 66.667 0.00 0.00 38.78 4.85
972 1012 2.574399 GCCGTCTCCACACTCTCC 59.426 66.667 0.00 0.00 0.00 3.71
979 1019 0.900647 CTCCACACTCTCCCCGTTCT 60.901 60.000 0.00 0.00 0.00 3.01
1087 1127 2.894765 TCCTGTCGTCATGTTCCAGTTA 59.105 45.455 0.00 0.00 0.00 2.24
1164 1204 1.795768 CGCTTACCTGAGCTTGTTGA 58.204 50.000 0.00 0.00 40.52 3.18
1231 1271 1.681166 GGAGCTCTGTCAGGTACCGTA 60.681 57.143 14.64 0.00 30.88 4.02
1256 1296 1.009829 GTCCTAGCACTCGCATTTGG 58.990 55.000 0.00 0.00 42.27 3.28
1266 1306 0.965439 TCGCATTTGGGGTTGGAAAG 59.035 50.000 0.00 0.00 0.00 2.62
1273 1313 1.000019 GGGGTTGGAAAGGTAGGGC 60.000 63.158 0.00 0.00 0.00 5.19
1290 1330 2.485795 GCCCTTTGTGTGGTGCGAA 61.486 57.895 0.00 0.00 0.00 4.70
1442 1482 1.152756 ATGGCGGGAATACAAGGCC 60.153 57.895 0.00 0.00 44.00 5.19
1569 1612 2.508663 GGCGACCGTAGAGGCAAC 60.509 66.667 0.00 0.00 46.52 4.17
1645 1689 0.178967 TGGCCTGATTTTGGTGAGCA 60.179 50.000 3.32 0.00 0.00 4.26
1649 1693 1.068055 CCTGATTTTGGTGAGCAGTGC 60.068 52.381 7.13 7.13 0.00 4.40
1663 1707 0.886490 CAGTGCCCTGACTTGACACC 60.886 60.000 0.00 0.00 41.50 4.16
1665 1709 3.050275 GCCCTGACTTGACACCGC 61.050 66.667 0.00 0.00 0.00 5.68
1692 1736 2.783135 CAATGTAGCCAGAACAGGTGT 58.217 47.619 0.00 0.00 0.00 4.16
1693 1737 2.479566 ATGTAGCCAGAACAGGTGTG 57.520 50.000 0.00 0.00 0.00 3.82
1738 1782 2.121385 TGCAGAGCAGGAGGAGGT 59.879 61.111 0.00 0.00 33.32 3.85
1743 1787 1.000993 GAGCAGGAGGAGGTGAGGA 59.999 63.158 0.00 0.00 0.00 3.71
1744 1788 1.001503 AGCAGGAGGAGGTGAGGAG 59.998 63.158 0.00 0.00 0.00 3.69
1745 1789 2.063378 GCAGGAGGAGGTGAGGAGG 61.063 68.421 0.00 0.00 0.00 4.30
1746 1790 1.390125 CAGGAGGAGGTGAGGAGGT 59.610 63.158 0.00 0.00 0.00 3.85
1747 1791 0.975040 CAGGAGGAGGTGAGGAGGTG 60.975 65.000 0.00 0.00 0.00 4.00
1748 1792 1.687493 GGAGGAGGTGAGGAGGTGG 60.687 68.421 0.00 0.00 0.00 4.61
1749 1793 2.284995 AGGAGGTGAGGAGGTGGC 60.285 66.667 0.00 0.00 0.00 5.01
1750 1794 3.775654 GGAGGTGAGGAGGTGGCG 61.776 72.222 0.00 0.00 0.00 5.69
1751 1795 4.459089 GAGGTGAGGAGGTGGCGC 62.459 72.222 0.00 0.00 0.00 6.53
1754 1798 4.767255 GTGAGGAGGTGGCGCCAG 62.767 72.222 33.73 0.00 40.61 4.85
1756 1800 4.154347 GAGGAGGTGGCGCCAGAG 62.154 72.222 33.73 0.00 40.61 3.35
1766 1810 2.355193 GCGCCAGAGGGAGAAGTCT 61.355 63.158 0.00 0.00 35.76 3.24
1768 1812 0.682855 CGCCAGAGGGAGAAGTCTCT 60.683 60.000 8.19 0.00 42.48 3.10
1787 1831 4.532126 TCTCTGCACAAGGAAGAATAAGGA 59.468 41.667 0.00 0.00 0.00 3.36
1792 1836 3.619038 CACAAGGAAGAATAAGGAGTCGC 59.381 47.826 0.00 0.00 0.00 5.19
1814 1872 2.046292 TGATTCGGGCACAGATCCATA 58.954 47.619 0.00 0.00 29.39 2.74
1825 1883 3.024547 ACAGATCCATACTGTAGCACGT 58.975 45.455 0.00 0.00 45.10 4.49
1837 1895 4.019919 TGTAGCACGTCCGTAATTAGAC 57.980 45.455 0.00 0.00 0.00 2.59
1841 1899 3.057033 AGCACGTCCGTAATTAGACTGTT 60.057 43.478 0.00 0.00 0.00 3.16
1889 1952 4.831710 TGCTCAGCTCATCACATATACTCT 59.168 41.667 0.00 0.00 0.00 3.24
1893 1956 6.302269 TCAGCTCATCACATATACTCTCTCA 58.698 40.000 0.00 0.00 0.00 3.27
1918 1981 9.846248 CAGTTCCAAAATATTTGAAGTTCTAGG 57.154 33.333 0.39 0.00 0.00 3.02
1934 1997 7.981102 AGTTCTAGGTTTGTCCTAATTCAAC 57.019 36.000 0.00 0.00 46.81 3.18
1943 2006 8.749354 GGTTTGTCCTAATTCAACCATCTTTAT 58.251 33.333 0.00 0.00 0.00 1.40
1962 2025 8.918202 TCTTTATGTTTGACCAAGTCTATTGT 57.082 30.769 0.00 0.00 33.15 2.71
2118 2181 7.342942 GTTTGACTTAAGACAAACCTAGAACG 58.657 38.462 34.07 0.11 46.80 3.95
2129 2192 8.718734 AGACAAACCTAGAACGTCAAATATTTC 58.281 33.333 0.00 0.00 0.00 2.17
2142 2205 6.438763 GTCAAATATTTCGGAATGGATGGAC 58.561 40.000 0.00 0.00 0.00 4.02
2180 2243 6.105333 TCCCAATTTTCATTCTTATTTGGCG 58.895 36.000 0.00 0.00 0.00 5.69
2186 2249 3.286353 TCATTCTTATTTGGCGGCATCA 58.714 40.909 14.32 2.56 0.00 3.07
2198 2261 2.349275 GGCGGCATCATTTCATTGTTTG 59.651 45.455 3.07 0.00 0.00 2.93
2207 2270 5.608449 TCATTTCATTGTTTGGATGTTGCA 58.392 33.333 0.00 0.00 0.00 4.08
2212 2275 3.399440 TTGTTTGGATGTTGCATTCCC 57.601 42.857 8.03 0.00 0.00 3.97
2238 2301 5.105146 TGTTTTGCCAGGTTCACTTATTGTT 60.105 36.000 0.00 0.00 0.00 2.83
2271 2334 0.535335 TATGCACCGGGAGAAGTCAC 59.465 55.000 6.32 0.00 0.00 3.67
2349 2412 1.271054 ACTCCACCACTGCTTGATGAC 60.271 52.381 0.00 0.00 0.00 3.06
2391 2454 9.695526 CAAATGTCTGAAGATTATGGTTTCAAA 57.304 29.630 0.00 0.00 31.11 2.69
2473 2641 6.519551 GCCTAAAGAGGTACCAACTAGACAAA 60.520 42.308 15.94 0.00 45.78 2.83
2515 2683 5.305585 TCCTGATGTTTCCTGTACTCAAAC 58.694 41.667 0.00 1.57 0.00 2.93
2516 2684 5.071788 TCCTGATGTTTCCTGTACTCAAACT 59.928 40.000 12.87 3.36 32.28 2.66
2517 2685 5.409826 CCTGATGTTTCCTGTACTCAAACTC 59.590 44.000 12.87 9.64 32.28 3.01
2548 2716 0.977395 AACTTCGCTCCTGCTAGGTT 59.023 50.000 0.00 0.00 36.53 3.50
2551 2719 2.003301 CTTCGCTCCTGCTAGGTTTTC 58.997 52.381 0.00 0.00 36.53 2.29
2557 2725 3.440522 GCTCCTGCTAGGTTTTCGAAATT 59.559 43.478 12.12 3.53 36.53 1.82
2587 2755 0.407139 AGGCTTGGGCATCTGTTCTT 59.593 50.000 0.00 0.00 40.87 2.52
2602 2770 8.695284 GCATCTGTTCTTATATCAGTTACTTCG 58.305 37.037 0.00 0.00 0.00 3.79
2626 2794 6.183360 CGTATGCTTTCGGTCTTTTCCTTATT 60.183 38.462 0.00 0.00 0.00 1.40
2692 2860 1.077086 TACAGCAGTGACCGGGGTA 59.923 57.895 6.32 0.00 0.00 3.69
2709 2877 1.487142 GGTAAGCTCTCTTTCCCTCCC 59.513 57.143 0.00 0.00 34.71 4.30
2713 2881 0.988063 GCTCTCTTTCCCTCCCAACT 59.012 55.000 0.00 0.00 0.00 3.16
2735 2904 1.457823 CCTGTGGTGTGCTTGCACAT 61.458 55.000 27.57 0.00 40.89 3.21
2770 2939 1.136695 CTTGCTTTTGTCCTTGTGGCA 59.863 47.619 0.00 0.00 0.00 4.92
2791 2960 5.450412 GGCATGTCCACGATTTAATTGATGT 60.450 40.000 0.00 0.00 34.01 3.06
2882 3051 3.574826 AGGATATCGTTGGAACTCTAGCC 59.425 47.826 0.00 0.00 0.00 3.93
2939 3108 6.485984 GGAGATTTAAGCATGACAGACATCAT 59.514 38.462 0.00 0.00 40.03 2.45
2961 3130 8.153479 TCATGCCAAGACAAATATGTATGTAC 57.847 34.615 0.00 0.00 40.74 2.90
3006 3175 5.379187 TCCAATATGGTCCAGATGATGTTG 58.621 41.667 0.00 0.00 39.03 3.33
3007 3176 4.022589 CCAATATGGTCCAGATGATGTTGC 60.023 45.833 0.00 0.00 31.35 4.17
3075 3244 5.459762 ACTTTTGATGTTTTCAGTTCATGCG 59.540 36.000 0.00 0.00 35.27 4.73
3090 3259 2.032117 TCATGCGTTGCACTGTAACAAG 60.032 45.455 10.20 0.00 43.04 3.16
3098 3267 4.400529 TGCACTGTAACAAGAAGACTCA 57.599 40.909 0.00 0.00 0.00 3.41
3123 3292 4.622701 ACTTCAAAGAAAGCCATATCGC 57.377 40.909 0.00 0.00 0.00 4.58
3127 3296 3.876914 TCAAAGAAAGCCATATCGCGATT 59.123 39.130 28.81 12.30 0.00 3.34
3159 3328 5.231991 CCTTTTCATTTTGAACCACGTTCTG 59.768 40.000 6.13 0.00 42.39 3.02
3177 3346 5.117592 CGTTCTGCTTTGGTCATTCAAATTC 59.882 40.000 0.00 0.00 36.24 2.17
3259 3428 7.751768 AAGGAAATTGAATCGTCTTCTTTCT 57.248 32.000 11.25 0.00 0.00 2.52
3329 3498 6.077993 TGTCTATTGCTCACTGGTATATCCT 58.922 40.000 0.00 0.00 37.07 3.24
3344 3513 6.183361 TGGTATATCCTACCCAACATCTCTCT 60.183 42.308 0.00 0.00 36.79 3.10
3346 3515 7.558444 GGTATATCCTACCCAACATCTCTCTAG 59.442 44.444 0.00 0.00 0.00 2.43
3377 3546 6.127647 TGTTTTGATGGCCATCTCTTATGTTC 60.128 38.462 38.59 21.35 38.60 3.18
3383 3552 6.942532 TGGCCATCTCTTATGTTCAATTAC 57.057 37.500 0.00 0.00 0.00 1.89
3386 3555 7.615365 TGGCCATCTCTTATGTTCAATTACTTT 59.385 33.333 0.00 0.00 0.00 2.66
3459 3628 3.366679 GGTTGATGTGGCACTTTGATCTG 60.367 47.826 19.83 0.00 0.00 2.90
3558 3727 3.829026 GGCCCCTAATCATTCTTCAATCC 59.171 47.826 0.00 0.00 0.00 3.01
3570 3739 1.876156 CTTCAATCCGGAATAGCTGGC 59.124 52.381 9.01 0.00 43.24 4.85
3582 3751 2.656947 TAGCTGGCTGGTTCAAGTTT 57.343 45.000 5.25 0.00 0.00 2.66
3736 3906 7.818930 CCAAAAGTATAGAACACAAATGCCAAT 59.181 33.333 0.00 0.00 0.00 3.16
3762 3933 5.273208 AGAGAAGTTGTATAGGAGCAGGAA 58.727 41.667 0.00 0.00 0.00 3.36
3765 3936 4.078639 AGTTGTATAGGAGCAGGAATGC 57.921 45.455 0.00 0.00 0.00 3.56
3774 3945 0.178767 AGCAGGAATGCTCGCATGTA 59.821 50.000 4.99 0.00 42.12 2.29
3776 3947 0.585357 CAGGAATGCTCGCATGTAGC 59.415 55.000 13.42 13.42 40.50 3.58
3785 3956 5.077134 TGCTCGCATGTAGCAGATATTAT 57.923 39.130 17.59 0.00 44.78 1.28
3786 3957 6.207691 TGCTCGCATGTAGCAGATATTATA 57.792 37.500 17.59 0.00 44.78 0.98
3787 3958 6.268566 TGCTCGCATGTAGCAGATATTATAG 58.731 40.000 17.59 0.00 44.78 1.31
3788 3959 5.174761 GCTCGCATGTAGCAGATATTATAGC 59.825 44.000 14.90 0.00 46.13 2.97
3789 3960 6.207691 TCGCATGTAGCAGATATTATAGCA 57.792 37.500 0.00 0.00 46.13 3.49
3790 3961 6.630071 TCGCATGTAGCAGATATTATAGCAA 58.370 36.000 0.00 0.00 46.13 3.91
3791 3962 7.096551 TCGCATGTAGCAGATATTATAGCAAA 58.903 34.615 0.00 0.00 46.13 3.68
3792 3963 7.602265 TCGCATGTAGCAGATATTATAGCAAAA 59.398 33.333 0.00 0.00 46.13 2.44
3793 3964 8.393366 CGCATGTAGCAGATATTATAGCAAAAT 58.607 33.333 0.00 0.00 46.13 1.82
3852 4023 6.360370 TGACTTAGGACAATGCTAGAACTT 57.640 37.500 0.00 0.00 0.00 2.66
3858 4029 9.383519 CTTAGGACAATGCTAGAACTTCAAATA 57.616 33.333 0.00 0.00 0.00 1.40
3875 4046 5.326069 TCAAATAATTTGGAACGGAGGGAA 58.674 37.500 0.00 0.00 40.98 3.97
3876 4047 5.955355 TCAAATAATTTGGAACGGAGGGAAT 59.045 36.000 0.00 0.00 40.98 3.01
3909 4080 9.337396 GATGTACAGTATCCAAATTCATGGTTA 57.663 33.333 0.33 0.00 41.46 2.85
3937 4108 8.367911 CCTGTTCAGCTGTGGAAGTATATTATA 58.632 37.037 14.67 0.00 0.00 0.98
3938 4109 9.197694 CTGTTCAGCTGTGGAAGTATATTATAC 57.802 37.037 14.67 5.81 0.00 1.47
3939 4110 8.924303 TGTTCAGCTGTGGAAGTATATTATACT 58.076 33.333 14.67 10.04 0.00 2.12
3945 4116 9.640963 GCTGTGGAAGTATATTATACTAACTGG 57.359 37.037 15.11 11.70 0.00 4.00
3994 4165 0.773644 AACACTTGAGCCCACCAGAT 59.226 50.000 0.00 0.00 0.00 2.90
4008 4179 5.510520 GCCCACCAGATTATCTAGAAGACTG 60.511 48.000 0.00 4.75 0.00 3.51
4014 4185 7.147408 ACCAGATTATCTAGAAGACTGCCAATT 60.147 37.037 0.00 0.00 0.00 2.32
4041 4212 1.401905 GCTTCCACCTAGAATTTGCCG 59.598 52.381 0.00 0.00 0.00 5.69
4063 4234 7.132863 GCCGAATTTCTAGATGTAAATGGAAC 58.867 38.462 0.00 0.00 0.00 3.62
4070 4241 8.561536 TTCTAGATGTAAATGGAACTATCCCA 57.438 34.615 0.00 0.00 45.95 4.37
4125 4296 1.271543 CCAATTCTCTGCACCCAGTGA 60.272 52.381 0.00 0.00 39.18 3.41
4134 4305 3.447586 TCTGCACCCAGTGATCTTAGTAC 59.552 47.826 0.00 0.00 40.09 2.73
4138 4309 4.421948 CACCCAGTGATCTTAGTACGAAC 58.578 47.826 0.00 0.00 35.23 3.95
4139 4310 4.158025 CACCCAGTGATCTTAGTACGAACT 59.842 45.833 0.00 0.00 36.29 3.01
4221 4392 5.627802 CGAACAGCAGCTACACTATAAAG 57.372 43.478 0.00 0.00 0.00 1.85
4226 4397 9.745880 GAACAGCAGCTACACTATAAAGTATAA 57.254 33.333 0.00 0.00 33.48 0.98
4251 4422 8.459911 AATAATACTTATTTTGGAACGGAGGG 57.540 34.615 0.00 0.00 32.06 4.30
4252 4423 5.703730 ATACTTATTTTGGAACGGAGGGA 57.296 39.130 0.00 0.00 0.00 4.20
4253 4424 3.951663 ACTTATTTTGGAACGGAGGGAG 58.048 45.455 0.00 0.00 0.00 4.30
4254 4425 3.329814 ACTTATTTTGGAACGGAGGGAGT 59.670 43.478 0.00 0.00 0.00 3.85
4255 4426 4.533311 ACTTATTTTGGAACGGAGGGAGTA 59.467 41.667 0.00 0.00 0.00 2.59
4256 4427 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
4257 4428 2.019807 TTTGGAACGGAGGGAGTACT 57.980 50.000 0.00 0.00 0.00 2.73
4258 4429 2.905415 TTGGAACGGAGGGAGTACTA 57.095 50.000 0.00 0.00 0.00 1.82
4259 4430 2.431954 TGGAACGGAGGGAGTACTAG 57.568 55.000 0.00 0.00 0.00 2.57
4262 4433 0.333993 AACGGAGGGAGTACTAGCCA 59.666 55.000 0.00 0.00 0.00 4.75
4302 4473 1.682005 CCATGGGGTGCGGTTGAAT 60.682 57.895 2.85 0.00 0.00 2.57
4303 4474 1.666209 CCATGGGGTGCGGTTGAATC 61.666 60.000 2.85 0.00 0.00 2.52
4304 4475 1.748879 ATGGGGTGCGGTTGAATCG 60.749 57.895 0.00 0.00 0.00 3.34
4306 4477 1.673009 GGGGTGCGGTTGAATCGAA 60.673 57.895 0.24 0.00 0.00 3.71
4309 4480 0.589223 GGTGCGGTTGAATCGAACAA 59.411 50.000 11.56 0.00 37.88 2.83
4310 4481 1.199097 GGTGCGGTTGAATCGAACAAT 59.801 47.619 11.56 0.00 37.88 2.71
4311 4482 2.351350 GGTGCGGTTGAATCGAACAATT 60.351 45.455 11.56 0.00 37.88 2.32
4312 4483 2.908626 GTGCGGTTGAATCGAACAATTC 59.091 45.455 3.66 1.23 36.27 2.17
4336 4521 4.351874 GCATATAGCACCCACTCCTTTA 57.648 45.455 0.00 0.00 44.79 1.85
4338 4523 4.697352 GCATATAGCACCCACTCCTTTATG 59.303 45.833 0.00 0.00 44.79 1.90
4351 4536 3.820467 CTCCTTTATGTCAACCAAGCACA 59.180 43.478 0.00 0.00 0.00 4.57
4356 4541 0.254462 TGTCAACCAAGCACAGGACA 59.746 50.000 0.00 0.00 33.31 4.02
4361 4546 1.529010 CCAAGCACAGGACAAGGCA 60.529 57.895 0.00 0.00 0.00 4.75
4423 4609 4.069232 CTGAGGTTCAGCCGGCGA 62.069 66.667 23.20 18.73 43.70 5.54
4424 4610 3.376935 CTGAGGTTCAGCCGGCGAT 62.377 63.158 23.20 0.00 43.70 4.58
4425 4611 2.892425 GAGGTTCAGCCGGCGATG 60.892 66.667 23.20 15.74 43.70 3.84
4434 4620 4.897357 CCGGCGATGCTGCAGCTA 62.897 66.667 36.61 24.05 42.66 3.32
4435 4621 3.336318 CGGCGATGCTGCAGCTAG 61.336 66.667 36.61 27.01 42.66 3.42
4436 4622 2.202987 GGCGATGCTGCAGCTAGT 60.203 61.111 36.61 23.40 42.66 2.57
4437 4623 2.243264 GGCGATGCTGCAGCTAGTC 61.243 63.158 36.61 27.95 42.66 2.59
4438 4624 2.584065 GCGATGCTGCAGCTAGTCG 61.584 63.158 35.29 35.29 42.66 4.18
4439 4625 1.226802 CGATGCTGCAGCTAGTCGT 60.227 57.895 36.61 16.84 42.66 4.34
4440 4626 1.477826 CGATGCTGCAGCTAGTCGTG 61.478 60.000 36.61 16.77 42.66 4.35
4444 4630 4.435436 TGCAGCTAGTCGTGGCGG 62.435 66.667 0.00 0.00 34.73 6.13
4449 4635 1.226717 GCTAGTCGTGGCGGAGAAG 60.227 63.158 0.00 0.00 0.00 2.85
4463 4649 0.980423 GAGAAGGGCAGGTGAGAAGT 59.020 55.000 0.00 0.00 0.00 3.01
4466 4652 0.398318 AAGGGCAGGTGAGAAGTGAC 59.602 55.000 0.00 0.00 0.00 3.67
4469 4655 0.033504 GGCAGGTGAGAAGTGACGAA 59.966 55.000 0.00 0.00 0.00 3.85
4471 4657 1.784525 CAGGTGAGAAGTGACGAACC 58.215 55.000 0.00 0.00 0.00 3.62
4472 4658 0.680061 AGGTGAGAAGTGACGAACCC 59.320 55.000 0.00 0.00 0.00 4.11
4473 4659 0.680061 GGTGAGAAGTGACGAACCCT 59.320 55.000 0.00 0.00 0.00 4.34
4483 4684 1.813728 GACGAACCCTGACCCGACTT 61.814 60.000 0.00 0.00 0.00 3.01
4487 4688 0.115745 AACCCTGACCCGACTTAGGA 59.884 55.000 0.00 0.00 31.91 2.94
4494 4695 2.862850 ACCCGACTTAGGATTAGGGT 57.137 50.000 0.00 0.00 46.39 4.34
4503 4704 0.122435 AGGATTAGGGTTGGGGGTGA 59.878 55.000 0.00 0.00 0.00 4.02
4506 4707 0.702316 ATTAGGGTTGGGGGTGACAC 59.298 55.000 0.00 0.00 0.00 3.67
4507 4708 0.698198 TTAGGGTTGGGGGTGACACA 60.698 55.000 8.08 0.00 32.66 3.72
4525 4726 2.279517 CCGGCGCTAGCGAAGAAT 60.280 61.111 39.52 0.00 46.35 2.40
4537 4738 1.676678 CGAAGAATCTGGCCCTCCGA 61.677 60.000 0.00 0.00 34.14 4.55
4539 4740 0.618968 AAGAATCTGGCCCTCCGAGT 60.619 55.000 0.00 0.00 34.14 4.18
4543 4744 1.807814 ATCTGGCCCTCCGAGTTTAT 58.192 50.000 0.00 0.00 34.14 1.40
4553 4754 3.447944 CCTCCGAGTTTATAGGGATAGCC 59.552 52.174 0.00 0.00 0.00 3.93
4556 4757 2.165845 CGAGTTTATAGGGATAGCCGGG 59.834 54.545 2.18 0.00 33.83 5.73
4557 4758 1.907255 AGTTTATAGGGATAGCCGGGC 59.093 52.381 12.11 12.11 33.83 6.13
4558 4759 0.899720 TTTATAGGGATAGCCGGGCG 59.100 55.000 14.39 0.00 33.83 6.13
4589 4791 3.615811 AGAGGAGGTGGCTGGGGA 61.616 66.667 0.00 0.00 0.00 4.81
4600 4802 4.052518 CTGGGGAAGGGCAGGGTG 62.053 72.222 0.00 0.00 0.00 4.61
4601 4803 4.608514 TGGGGAAGGGCAGGGTGA 62.609 66.667 0.00 0.00 0.00 4.02
4602 4804 4.048470 GGGGAAGGGCAGGGTGAC 62.048 72.222 0.00 0.00 0.00 3.67
4603 4805 4.410400 GGGAAGGGCAGGGTGACG 62.410 72.222 0.00 0.00 0.00 4.35
4604 4806 3.319198 GGAAGGGCAGGGTGACGA 61.319 66.667 0.00 0.00 0.00 4.20
4605 4807 2.266055 GAAGGGCAGGGTGACGAG 59.734 66.667 0.00 0.00 0.00 4.18
4606 4808 3.316573 GAAGGGCAGGGTGACGAGG 62.317 68.421 0.00 0.00 0.00 4.63
4665 4881 2.183555 GTTAGGCCGGTCGTCAGG 59.816 66.667 1.90 0.00 0.00 3.86
4681 4897 4.344865 GGGAGGCGGCTGTTCCAA 62.345 66.667 19.63 0.00 32.50 3.53
4682 4898 2.044946 GGAGGCGGCTGTTCCAAT 60.045 61.111 19.63 0.00 34.01 3.16
4685 4901 1.230324 GAGGCGGCTGTTCCAATATC 58.770 55.000 19.63 0.00 34.01 1.63
4688 4904 1.065551 GGCGGCTGTTCCAATATCAAC 59.934 52.381 0.00 0.00 34.01 3.18
4689 4905 1.742831 GCGGCTGTTCCAATATCAACA 59.257 47.619 0.00 0.00 34.01 3.33
4693 4909 3.680642 CTGTTCCAATATCAACAGCGG 57.319 47.619 8.46 0.00 42.23 5.52
4694 4910 1.742831 TGTTCCAATATCAACAGCGGC 59.257 47.619 0.00 0.00 0.00 6.53
4695 4911 1.013596 TTCCAATATCAACAGCGGCG 58.986 50.000 0.51 0.51 0.00 6.46
4696 4912 0.176910 TCCAATATCAACAGCGGCGA 59.823 50.000 12.98 0.00 0.00 5.54
4697 4913 1.202639 TCCAATATCAACAGCGGCGAT 60.203 47.619 12.98 0.00 0.00 4.58
4698 4914 1.069703 CCAATATCAACAGCGGCGATG 60.070 52.381 24.95 24.95 0.00 3.84
4702 4918 0.960364 ATCAACAGCGGCGATGGTTT 60.960 50.000 29.60 12.75 0.00 3.27
4703 4919 1.169661 TCAACAGCGGCGATGGTTTT 61.170 50.000 29.60 11.96 0.00 2.43
4706 4922 1.154225 CAGCGGCGATGGTTTTGAC 60.154 57.895 18.75 0.00 0.00 3.18
4725 4941 2.931325 GACCACAAAACGACAGTGTACA 59.069 45.455 0.00 0.00 0.00 2.90
4727 4943 2.286184 CCACAAAACGACAGTGTACAGC 60.286 50.000 0.00 0.00 0.00 4.40
4750 4966 2.969827 TCGGAATCGACTGCAGCA 59.030 55.556 15.27 0.00 40.88 4.41
4751 4967 1.291906 TCGGAATCGACTGCAGCAA 59.708 52.632 15.27 0.00 40.88 3.91
4757 4973 0.792640 ATCGACTGCAGCAAAGTTCG 59.207 50.000 15.27 14.56 0.00 3.95
4763 4979 1.370900 GCAGCAAAGTTCGCCTGTG 60.371 57.895 0.00 0.00 0.00 3.66
4767 4983 0.874390 GCAAAGTTCGCCTGTGATCA 59.126 50.000 0.00 0.00 28.74 2.92
4770 4986 2.254546 AAGTTCGCCTGTGATCAACA 57.745 45.000 0.00 0.00 37.22 3.33
4779 4995 5.414144 TCGCCTGTGATCAACAATGAATTAA 59.586 36.000 0.00 0.00 39.49 1.40
4783 4999 7.253422 CCTGTGATCAACAATGAATTAACTCC 58.747 38.462 0.00 0.00 39.49 3.85
4785 5001 6.718912 TGTGATCAACAATGAATTAACTCCCA 59.281 34.615 0.00 0.00 39.49 4.37
4786 5002 7.094248 TGTGATCAACAATGAATTAACTCCCAG 60.094 37.037 0.00 0.00 39.49 4.45
4817 5033 4.937620 TGCAGTGACTAAATTGGCTAGAAG 59.062 41.667 0.00 0.00 0.00 2.85
4829 5045 1.915952 GCTAGAAGCCTCGAAGACAC 58.084 55.000 0.00 0.00 34.48 3.67
4830 5046 1.474879 GCTAGAAGCCTCGAAGACACT 59.525 52.381 0.00 0.00 34.48 3.55
4831 5047 2.733858 GCTAGAAGCCTCGAAGACACTG 60.734 54.545 0.00 0.00 34.48 3.66
4832 5048 1.621992 AGAAGCCTCGAAGACACTGA 58.378 50.000 0.00 0.00 0.00 3.41
4833 5049 1.271102 AGAAGCCTCGAAGACACTGAC 59.729 52.381 0.00 0.00 0.00 3.51
4835 5051 0.600557 AGCCTCGAAGACACTGACAG 59.399 55.000 0.00 0.00 0.00 3.51
4836 5052 0.598562 GCCTCGAAGACACTGACAGA 59.401 55.000 10.08 0.00 0.00 3.41
4837 5053 1.000163 GCCTCGAAGACACTGACAGAA 60.000 52.381 10.08 0.00 0.00 3.02
4852 5097 4.650734 TGACAGAACAAGGAATGCATACA 58.349 39.130 0.00 0.00 0.00 2.29
4857 5102 8.121305 ACAGAACAAGGAATGCATACATAAAA 57.879 30.769 0.00 0.00 34.62 1.52
4886 5131 7.931578 AATGATATTGGTCCAAGTTACGAAA 57.068 32.000 10.72 0.00 0.00 3.46
4889 5134 9.793259 ATGATATTGGTCCAAGTTACGAAATAT 57.207 29.630 10.72 0.00 0.00 1.28
4913 5158 6.370593 TCGACTTCATTGTTTATGAGTTTGC 58.629 36.000 0.00 0.00 43.87 3.68
4914 5159 5.281376 CGACTTCATTGTTTATGAGTTTGCG 59.719 40.000 0.00 0.00 43.87 4.85
4920 5165 5.994887 TTGTTTATGAGTTTGCGTACTGT 57.005 34.783 0.00 0.00 0.00 3.55
4976 5221 2.349886 GCTTCAGATGAGCACCTTTACG 59.650 50.000 0.00 0.00 0.00 3.18
4982 5227 3.704566 AGATGAGCACCTTTACGATGGTA 59.295 43.478 0.00 0.00 34.79 3.25
5134 5379 9.461312 TTTTGTTTACATGCATATTAGGACTCT 57.539 29.630 0.00 0.00 0.00 3.24
5182 5427 5.825593 ACTTTCAGGAAGTGTTCTCCATA 57.174 39.130 0.00 0.00 46.66 2.74
5189 5434 7.050377 TCAGGAAGTGTTCTCCATATTGATTC 58.950 38.462 0.00 0.00 0.00 2.52
5194 5439 9.118300 GAAGTGTTCTCCATATTGATTCTCATT 57.882 33.333 0.00 0.00 0.00 2.57
5238 5483 8.947055 ACAAGATAAAACAAAGACTTTGCATT 57.053 26.923 24.63 20.69 44.39 3.56
5248 5493 9.986833 AACAAAGACTTTGCATTCAAATAAAAC 57.013 25.926 24.63 0.00 44.39 2.43
5252 5497 6.359617 AGACTTTGCATTCAAATAAAACGACG 59.640 34.615 0.00 0.00 40.97 5.12
5253 5498 4.877270 TTGCATTCAAATAAAACGACGC 57.123 36.364 0.00 0.00 0.00 5.19
5254 5499 3.890128 TGCATTCAAATAAAACGACGCA 58.110 36.364 0.00 0.00 0.00 5.24
5261 5506 7.485825 TTCAAATAAAACGACGCATATTGTG 57.514 32.000 0.00 0.82 0.00 3.33
5283 5528 4.571580 TGCATTTGTTTCTTTGCCTTTCAG 59.428 37.500 0.00 0.00 34.20 3.02
5299 5544 8.419076 TGCCTTTCAGTTGAAAATTAAGAAAC 57.581 30.769 8.48 0.00 42.72 2.78
5301 5546 9.744468 GCCTTTCAGTTGAAAATTAAGAAACTA 57.256 29.630 8.48 0.00 42.72 2.24
5312 5557 7.524717 AAATTAAGAAACTACACCAGCATGT 57.475 32.000 0.00 0.00 36.56 3.21
5316 5561 4.207165 AGAAACTACACCAGCATGTTGTT 58.793 39.130 8.84 8.87 46.09 2.83
5336 5581 7.550551 TGTTGTTTTATGTTTCTGGATTGCAAA 59.449 29.630 1.71 0.00 0.00 3.68
5353 5598 7.542824 GGATTGCAAATCATTTTTCATTTTGGG 59.457 33.333 1.71 0.00 0.00 4.12
5373 5618 3.391296 GGGTAAAGTGCCATGAGAGGATA 59.609 47.826 0.00 0.00 0.00 2.59
5375 5620 4.999950 GGTAAAGTGCCATGAGAGGATATG 59.000 45.833 0.00 0.00 0.00 1.78
5387 5632 1.283321 GAGGATATGATGGGGCCTTCC 59.717 57.143 0.84 0.00 0.00 3.46
5400 5645 2.296190 GGGCCTTCCAAGTACAGTTTTG 59.704 50.000 0.84 0.00 35.00 2.44
5401 5646 3.219281 GGCCTTCCAAGTACAGTTTTGA 58.781 45.455 0.00 0.00 0.00 2.69
5402 5647 3.826729 GGCCTTCCAAGTACAGTTTTGAT 59.173 43.478 0.00 0.00 0.00 2.57
5403 5648 4.280929 GGCCTTCCAAGTACAGTTTTGATT 59.719 41.667 0.00 0.00 0.00 2.57
5404 5649 5.222631 GCCTTCCAAGTACAGTTTTGATTG 58.777 41.667 0.00 0.00 0.00 2.67
5450 5697 2.897969 TGTGGAGTTCTGGTCCTAGTTC 59.102 50.000 0.00 0.00 34.86 3.01
5451 5698 3.166679 GTGGAGTTCTGGTCCTAGTTCT 58.833 50.000 0.00 0.00 34.86 3.01
5453 5700 3.166679 GGAGTTCTGGTCCTAGTTCTGT 58.833 50.000 0.00 0.00 0.00 3.41
5456 5703 3.757493 AGTTCTGGTCCTAGTTCTGTACG 59.243 47.826 0.00 0.00 0.00 3.67
5459 5706 4.597004 TCTGGTCCTAGTTCTGTACGAAT 58.403 43.478 0.00 0.00 33.45 3.34
5460 5707 5.748402 TCTGGTCCTAGTTCTGTACGAATA 58.252 41.667 0.00 0.00 33.45 1.75
5462 5709 5.748402 TGGTCCTAGTTCTGTACGAATAGA 58.252 41.667 0.00 0.00 33.45 1.98
5463 5710 6.182627 TGGTCCTAGTTCTGTACGAATAGAA 58.817 40.000 0.00 0.00 33.45 2.10
5464 5711 6.832384 TGGTCCTAGTTCTGTACGAATAGAAT 59.168 38.462 0.00 0.00 35.58 2.40
5465 5712 7.140048 GGTCCTAGTTCTGTACGAATAGAATG 58.860 42.308 0.00 0.00 35.58 2.67
5466 5713 7.140048 GTCCTAGTTCTGTACGAATAGAATGG 58.860 42.308 0.00 1.01 35.58 3.16
5467 5714 6.832384 TCCTAGTTCTGTACGAATAGAATGGT 59.168 38.462 0.00 0.00 35.58 3.55
5468 5715 7.994911 TCCTAGTTCTGTACGAATAGAATGGTA 59.005 37.037 0.00 0.00 35.58 3.25
5469 5716 8.074972 CCTAGTTCTGTACGAATAGAATGGTAC 58.925 40.741 0.00 0.00 35.58 3.34
5470 5717 7.642082 AGTTCTGTACGAATAGAATGGTACT 57.358 36.000 0.00 0.00 35.58 2.73
5471 5718 7.705214 AGTTCTGTACGAATAGAATGGTACTC 58.295 38.462 0.00 0.00 35.58 2.59
5473 5720 7.634671 TCTGTACGAATAGAATGGTACTCAA 57.365 36.000 0.00 0.00 36.93 3.02
5474 5721 7.478322 TCTGTACGAATAGAATGGTACTCAAC 58.522 38.462 0.00 0.00 36.93 3.18
5475 5722 7.338703 TCTGTACGAATAGAATGGTACTCAACT 59.661 37.037 0.00 0.00 36.93 3.16
5477 5724 7.972277 TGTACGAATAGAATGGTACTCAACTTC 59.028 37.037 0.00 0.00 36.93 3.01
5483 5730 5.230942 AGAATGGTACTCAACTTCACTTCG 58.769 41.667 0.00 0.00 0.00 3.79
5507 5754 6.597614 GCTGAAGTGCATCTAATATTAGTGC 58.402 40.000 26.39 26.39 37.82 4.40
5528 5775 7.293073 AGTGCATTACTAATGGATCTTGGAAT 58.707 34.615 10.24 0.00 41.37 3.01
5529 5776 7.230108 AGTGCATTACTAATGGATCTTGGAATG 59.770 37.037 10.24 0.00 41.37 2.67
5530 5777 7.013655 GTGCATTACTAATGGATCTTGGAATGT 59.986 37.037 10.24 0.00 41.37 2.71
5531 5778 7.560991 TGCATTACTAATGGATCTTGGAATGTT 59.439 33.333 10.24 0.00 39.31 2.71
5597 5844 7.336396 AGTACTGAGTGTAAGTTCCAACTTTT 58.664 34.615 9.92 0.00 46.52 2.27
5598 5845 7.827729 AGTACTGAGTGTAAGTTCCAACTTTTT 59.172 33.333 9.92 0.00 46.52 1.94
5627 5874 8.740123 TTTGAACTTTAGGTGAACATGAGTAA 57.260 30.769 0.00 0.00 0.00 2.24
5632 5879 8.918202 ACTTTAGGTGAACATGAGTAAATCAA 57.082 30.769 0.00 0.00 42.53 2.57
5633 5880 9.349713 ACTTTAGGTGAACATGAGTAAATCAAA 57.650 29.630 0.00 0.00 42.53 2.69
5688 5935 8.547967 GTCTTGGAGACATAAACATGAGTAAA 57.452 34.615 0.00 0.00 44.45 2.01
5689 5936 9.167311 GTCTTGGAGACATAAACATGAGTAAAT 57.833 33.333 0.00 0.00 44.45 1.40
5690 5937 9.383519 TCTTGGAGACATAAACATGAGTAAATC 57.616 33.333 0.00 0.00 42.32 2.17
5691 5938 9.166173 CTTGGAGACATAAACATGAGTAAATCA 57.834 33.333 0.00 0.00 41.19 2.57
5692 5939 9.513906 TTGGAGACATAAACATGAGTAAATCAA 57.486 29.630 0.00 0.00 40.54 2.57
5693 5940 9.513906 TGGAGACATAAACATGAGTAAATCAAA 57.486 29.630 0.00 0.00 37.05 2.69
5703 5950 9.471702 AACATGAGTAAATCAAATCATCTTCCT 57.528 29.630 0.00 0.00 42.53 3.36
5704 5951 9.471702 ACATGAGTAAATCAAATCATCTTCCTT 57.528 29.630 0.00 0.00 42.53 3.36
5708 5955 9.794685 GAGTAAATCAAATCATCTTCCTTTTCC 57.205 33.333 0.00 0.00 0.00 3.13
5709 5956 8.753133 AGTAAATCAAATCATCTTCCTTTTCCC 58.247 33.333 0.00 0.00 0.00 3.97
5710 5957 5.841957 ATCAAATCATCTTCCTTTTCCCG 57.158 39.130 0.00 0.00 0.00 5.14
5711 5958 4.662278 TCAAATCATCTTCCTTTTCCCGT 58.338 39.130 0.00 0.00 0.00 5.28
5712 5959 4.700213 TCAAATCATCTTCCTTTTCCCGTC 59.300 41.667 0.00 0.00 0.00 4.79
5713 5960 4.576330 AATCATCTTCCTTTTCCCGTCT 57.424 40.909 0.00 0.00 0.00 4.18
5714 5961 5.693769 AATCATCTTCCTTTTCCCGTCTA 57.306 39.130 0.00 0.00 0.00 2.59
5715 5962 4.737855 TCATCTTCCTTTTCCCGTCTAG 57.262 45.455 0.00 0.00 0.00 2.43
5716 5963 3.118738 TCATCTTCCTTTTCCCGTCTAGC 60.119 47.826 0.00 0.00 0.00 3.42
5717 5964 1.553704 TCTTCCTTTTCCCGTCTAGCC 59.446 52.381 0.00 0.00 0.00 3.93
5718 5965 1.278127 CTTCCTTTTCCCGTCTAGCCA 59.722 52.381 0.00 0.00 0.00 4.75
5719 5966 1.354101 TCCTTTTCCCGTCTAGCCAA 58.646 50.000 0.00 0.00 0.00 4.52
5720 5967 1.002773 TCCTTTTCCCGTCTAGCCAAC 59.997 52.381 0.00 0.00 0.00 3.77
5721 5968 1.003233 CCTTTTCCCGTCTAGCCAACT 59.997 52.381 0.00 0.00 0.00 3.16
5722 5969 2.552373 CCTTTTCCCGTCTAGCCAACTT 60.552 50.000 0.00 0.00 0.00 2.66
5723 5970 2.178912 TTTCCCGTCTAGCCAACTTG 57.821 50.000 0.00 0.00 0.00 3.16
5724 5971 1.053424 TTCCCGTCTAGCCAACTTGT 58.947 50.000 0.00 0.00 0.00 3.16
5725 5972 0.606604 TCCCGTCTAGCCAACTTGTC 59.393 55.000 0.00 0.00 0.00 3.18
5726 5973 0.608640 CCCGTCTAGCCAACTTGTCT 59.391 55.000 0.00 0.00 0.00 3.41
5727 5974 1.002087 CCCGTCTAGCCAACTTGTCTT 59.998 52.381 0.00 0.00 0.00 3.01
5728 5975 2.069273 CCGTCTAGCCAACTTGTCTTG 58.931 52.381 0.00 0.00 0.00 3.02
5729 5976 2.069273 CGTCTAGCCAACTTGTCTTGG 58.931 52.381 0.00 0.00 43.36 3.61
5730 5977 2.288825 CGTCTAGCCAACTTGTCTTGGA 60.289 50.000 2.01 0.00 43.19 3.53
5814 6061 5.591877 AGAGATCCTTTGCCATGACATAAAC 59.408 40.000 0.00 0.00 0.00 2.01
5875 6122 2.046009 TAACCTTCGTGCTGCCCACA 62.046 55.000 0.00 0.00 44.91 4.17
5946 6193 2.802247 GTTTTGTGCATTTTCTCTGGGC 59.198 45.455 0.00 0.00 0.00 5.36
5976 6223 2.128771 TAGCTTCATTTGTGCTCCCC 57.871 50.000 0.00 0.00 38.15 4.81
5986 6233 2.046023 TGCTCCCCGCATGTCTTG 60.046 61.111 0.00 0.00 45.47 3.02
6026 6273 3.830192 CCAGCTGGAATTGGCGGC 61.830 66.667 29.88 0.00 37.39 6.53
6235 6482 8.573035 CACAACCATTATTACACTACAAAAGGT 58.427 33.333 0.00 0.00 0.00 3.50
6236 6483 8.789762 ACAACCATTATTACACTACAAAAGGTC 58.210 33.333 0.00 0.00 0.00 3.85
6266 6513 0.457443 GGCTCAGGCATGGCTTTTAC 59.543 55.000 20.85 9.29 40.87 2.01
6270 6517 3.609853 CTCAGGCATGGCTTTTACTGTA 58.390 45.455 20.85 0.00 0.00 2.74
6285 6532 2.802787 CTGTAAGTCGGCAGGGATAG 57.197 55.000 0.00 0.00 0.00 2.08
6326 6573 0.962356 ATTGAAAGCCGCCTGGAGTG 60.962 55.000 0.00 0.00 37.49 3.51
6332 6579 2.267961 CCGCCTGGAGTGTTACCC 59.732 66.667 0.00 0.00 37.49 3.69
6338 6585 2.224793 GCCTGGAGTGTTACCCTTTCTT 60.225 50.000 0.00 0.00 0.00 2.52
6340 6587 3.821033 CCTGGAGTGTTACCCTTTCTTTG 59.179 47.826 0.00 0.00 0.00 2.77
6341 6588 4.445735 CCTGGAGTGTTACCCTTTCTTTGA 60.446 45.833 0.00 0.00 0.00 2.69
6344 6591 5.131067 GGAGTGTTACCCTTTCTTTGAACT 58.869 41.667 0.00 0.00 0.00 3.01
6345 6592 6.126710 TGGAGTGTTACCCTTTCTTTGAACTA 60.127 38.462 0.00 0.00 0.00 2.24
6346 6593 6.769341 GGAGTGTTACCCTTTCTTTGAACTAA 59.231 38.462 0.00 0.00 0.00 2.24
6347 6594 7.283807 GGAGTGTTACCCTTTCTTTGAACTAAA 59.716 37.037 0.00 0.00 0.00 1.85
6349 6596 8.464404 AGTGTTACCCTTTCTTTGAACTAAAAC 58.536 33.333 0.00 0.00 0.00 2.43
6350 6597 7.703621 GTGTTACCCTTTCTTTGAACTAAAACC 59.296 37.037 0.00 0.00 0.00 3.27
6352 6599 6.216801 ACCCTTTCTTTGAACTAAAACCAC 57.783 37.500 0.00 0.00 0.00 4.16
6353 6600 5.163591 ACCCTTTCTTTGAACTAAAACCACG 60.164 40.000 0.00 0.00 0.00 4.94
6355 6602 5.969435 CCTTTCTTTGAACTAAAACCACGAC 59.031 40.000 0.00 0.00 0.00 4.34
6356 6603 4.782252 TCTTTGAACTAAAACCACGACG 57.218 40.909 0.00 0.00 0.00 5.12
6358 6605 4.505191 TCTTTGAACTAAAACCACGACGAG 59.495 41.667 0.00 0.00 0.00 4.18
6359 6606 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
6361 6608 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
6362 6609 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
6363 6610 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
6365 6612 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
6366 6613 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
6367 6614 2.825861 ACCACGACGAGTAATTTGGT 57.174 45.000 0.00 0.00 0.00 3.67
6371 6618 3.611113 CCACGACGAGTAATTTGGTACAG 59.389 47.826 0.00 0.00 42.39 2.74
6372 6619 4.478699 CACGACGAGTAATTTGGTACAGA 58.521 43.478 0.00 0.00 42.39 3.41
6373 6620 4.557690 CACGACGAGTAATTTGGTACAGAG 59.442 45.833 0.00 0.00 42.39 3.35
6374 6621 4.103357 CGACGAGTAATTTGGTACAGAGG 58.897 47.826 0.00 0.00 42.39 3.69
6375 6622 4.430908 GACGAGTAATTTGGTACAGAGGG 58.569 47.826 0.00 0.00 42.39 4.30
6386 6633 4.684724 TGGTACAGAGGGAGTAGAAACAT 58.315 43.478 0.00 0.00 0.00 2.71
6473 6720 8.344446 TCACATTCATTCTCATTCAAACATCT 57.656 30.769 0.00 0.00 0.00 2.90
6527 6774 6.513230 GCATCAGTAAAATGGCAACGATATCA 60.513 38.462 3.12 0.00 42.51 2.15
6594 6841 1.430632 CGCCGCAGCAAAGATGAAT 59.569 52.632 0.00 0.00 39.83 2.57
6602 6849 5.449041 CCGCAGCAAAGATGAATAAGCTTTA 60.449 40.000 3.20 0.00 31.21 1.85
6606 6853 8.131100 GCAGCAAAGATGAATAAGCTTTATGTA 58.869 33.333 3.20 0.00 31.21 2.29
6628 6875 1.542030 TCCTCTCGTCTTCTCTGTTGC 59.458 52.381 0.00 0.00 0.00 4.17
6634 6881 1.664649 TCTTCTCTGTTGCGCCACG 60.665 57.895 4.18 0.63 0.00 4.94
6658 6905 5.569630 GCCGGATGTACTATTTCCATCTGAT 60.570 44.000 5.05 0.00 42.14 2.90
6714 6968 5.928976 CCATGGATGGTTAGTCAATCTACA 58.071 41.667 5.56 0.00 43.05 2.74
6746 7000 7.942341 AGTTTTCACCATCACCTTGTAGAAATA 59.058 33.333 0.00 0.00 0.00 1.40
6757 7011 5.104900 ACCTTGTAGAAATAGTGTGGCTAGG 60.105 44.000 0.00 0.00 32.45 3.02
6758 7012 4.402056 TGTAGAAATAGTGTGGCTAGGC 57.598 45.455 9.85 9.85 32.45 3.93
6759 7013 4.030913 TGTAGAAATAGTGTGGCTAGGCT 58.969 43.478 18.18 0.00 32.45 4.58
6760 7014 3.828875 AGAAATAGTGTGGCTAGGCTC 57.171 47.619 18.18 14.53 32.45 4.70
6761 7015 3.379452 AGAAATAGTGTGGCTAGGCTCT 58.621 45.455 18.18 14.45 32.45 4.09
6763 7017 2.166907 ATAGTGTGGCTAGGCTCTGT 57.833 50.000 18.18 8.64 32.45 3.41
6764 7018 1.475403 TAGTGTGGCTAGGCTCTGTC 58.525 55.000 18.18 8.78 0.00 3.51
6765 7019 1.153745 GTGTGGCTAGGCTCTGTCG 60.154 63.158 18.18 0.00 0.00 4.35
6766 7020 1.304134 TGTGGCTAGGCTCTGTCGA 60.304 57.895 18.18 0.00 0.00 4.20
6767 7021 1.139947 GTGGCTAGGCTCTGTCGAC 59.860 63.158 18.18 9.11 0.00 4.20
6769 7023 1.315981 TGGCTAGGCTCTGTCGACTG 61.316 60.000 17.92 16.72 0.00 3.51
6770 7024 1.032657 GGCTAGGCTCTGTCGACTGA 61.033 60.000 21.87 21.87 0.00 3.41
6771 7025 0.099791 GCTAGGCTCTGTCGACTGAC 59.900 60.000 19.81 15.81 45.71 3.51
6795 7073 1.750778 AGCCTTGTAAATCGGCCATTG 59.249 47.619 2.24 0.00 44.84 2.82
6800 7078 4.398044 CCTTGTAAATCGGCCATTGTTAGT 59.602 41.667 2.24 0.00 0.00 2.24
6829 7107 4.814234 TCGTATCTGTGTGTTGCTTTTTCT 59.186 37.500 0.00 0.00 0.00 2.52
6830 7108 5.050363 TCGTATCTGTGTGTTGCTTTTTCTC 60.050 40.000 0.00 0.00 0.00 2.87
6832 7110 3.006940 TCTGTGTGTTGCTTTTTCTCGT 58.993 40.909 0.00 0.00 0.00 4.18
6833 7111 3.063452 TCTGTGTGTTGCTTTTTCTCGTC 59.937 43.478 0.00 0.00 0.00 4.20
6835 7113 3.063452 TGTGTGTTGCTTTTTCTCGTCTC 59.937 43.478 0.00 0.00 0.00 3.36
6836 7114 2.284150 TGTGTTGCTTTTTCTCGTCTCG 59.716 45.455 0.00 0.00 0.00 4.04
6838 7116 1.527311 GTTGCTTTTTCTCGTCTCGCT 59.473 47.619 0.00 0.00 0.00 4.93
6840 7118 0.179238 GCTTTTTCTCGTCTCGCTGC 60.179 55.000 0.00 0.00 0.00 5.25
6841 7119 1.423395 CTTTTTCTCGTCTCGCTGCT 58.577 50.000 0.00 0.00 0.00 4.24
6842 7120 1.125748 CTTTTTCTCGTCTCGCTGCTG 59.874 52.381 0.00 0.00 0.00 4.41
6843 7121 0.313987 TTTTCTCGTCTCGCTGCTGA 59.686 50.000 0.00 0.00 0.00 4.26
6844 7122 0.387367 TTTCTCGTCTCGCTGCTGAC 60.387 55.000 11.03 11.03 0.00 3.51
6845 7123 1.515521 TTCTCGTCTCGCTGCTGACA 61.516 55.000 17.92 8.18 33.18 3.58
6846 7124 1.799519 CTCGTCTCGCTGCTGACAC 60.800 63.158 17.92 6.63 33.18 3.67
6847 7125 2.807045 CGTCTCGCTGCTGACACC 60.807 66.667 17.92 0.00 33.18 4.16
6848 7126 2.340078 GTCTCGCTGCTGACACCA 59.660 61.111 14.65 0.00 33.75 4.17
6850 7128 2.029518 CTCGCTGCTGACACCACA 59.970 61.111 0.00 0.00 0.00 4.17
6865 7155 3.312736 ACCACAGGTGTCATTTTCCTT 57.687 42.857 0.00 0.00 32.98 3.36
6866 7156 3.222603 ACCACAGGTGTCATTTTCCTTC 58.777 45.455 0.00 0.00 32.98 3.46
6868 7158 3.891366 CCACAGGTGTCATTTTCCTTCTT 59.109 43.478 0.00 0.00 0.00 2.52
6869 7159 4.261741 CCACAGGTGTCATTTTCCTTCTTG 60.262 45.833 0.00 0.00 0.00 3.02
6870 7160 3.891366 ACAGGTGTCATTTTCCTTCTTGG 59.109 43.478 0.00 0.00 37.10 3.61
6871 7161 4.144297 CAGGTGTCATTTTCCTTCTTGGA 58.856 43.478 0.00 0.00 44.51 3.53
6879 7169 1.221840 TCCTTCTTGGAGGCGCATC 59.778 57.895 14.84 14.84 40.56 3.91
6880 7170 1.078214 CCTTCTTGGAGGCGCATCA 60.078 57.895 24.79 8.46 38.35 3.07
6892 7182 2.114838 GCATCATGGCCTCCTCCC 59.885 66.667 3.32 0.00 0.00 4.30
6949 7239 2.309528 CGGTTCTTCGGATTGGATGA 57.690 50.000 0.00 0.00 0.00 2.92
6951 7241 1.933853 GGTTCTTCGGATTGGATGACG 59.066 52.381 0.00 0.00 0.00 4.35
6953 7243 2.579207 TCTTCGGATTGGATGACGAC 57.421 50.000 0.00 0.00 34.82 4.34
6956 7246 2.237751 CGGATTGGATGACGACGGC 61.238 63.158 0.00 0.00 0.00 5.68
6957 7247 1.153449 GGATTGGATGACGACGGCA 60.153 57.895 5.51 5.51 0.00 5.69
6958 7248 0.532862 GGATTGGATGACGACGGCAT 60.533 55.000 17.96 17.96 0.00 4.40
6961 7251 0.739462 TTGGATGACGACGGCATCAC 60.739 55.000 37.19 27.74 42.99 3.06
6964 7254 1.148157 GATGACGACGGCATCACAGG 61.148 60.000 33.52 0.00 41.32 4.00
6973 7263 1.133025 CGGCATCACAGGGTCATTTTC 59.867 52.381 0.00 0.00 0.00 2.29
7013 7303 4.642542 GTCGCTCGCGGTATCCCC 62.643 72.222 6.13 0.00 40.25 4.81
7016 7306 4.301027 GCTCGCGGTATCCCCAGG 62.301 72.222 6.13 0.00 0.00 4.45
7031 7326 2.035626 AGGGGTTTGGCGATGGTG 59.964 61.111 0.00 0.00 0.00 4.17
7033 7328 3.068064 GGGTTTGGCGATGGTGGG 61.068 66.667 0.00 0.00 0.00 4.61
7038 7333 4.776322 TGGCGATGGTGGGCTTCG 62.776 66.667 0.00 0.00 36.02 3.79
7047 7342 1.652563 GTGGGCTTCGTGTTGGTTC 59.347 57.895 0.00 0.00 0.00 3.62
7054 7350 2.051345 CGTGTTGGTTCGCTTGCC 60.051 61.111 0.00 0.00 0.00 4.52
7063 7359 1.682087 GGTTCGCTTGCCCCTCTAAAT 60.682 52.381 0.00 0.00 0.00 1.40
7078 7374 3.578282 CTCTAAATTGGGGCTTTTGTGGT 59.422 43.478 0.00 0.00 0.00 4.16
7088 7384 3.319689 GGGCTTTTGTGGTTTTAGCTGTA 59.680 43.478 0.00 0.00 32.58 2.74
7090 7386 5.184287 GGGCTTTTGTGGTTTTAGCTGTATA 59.816 40.000 0.00 0.00 32.58 1.47
7093 7389 7.120138 GGCTTTTGTGGTTTTAGCTGTATAGTA 59.880 37.037 0.00 0.00 32.58 1.82
7107 7403 6.330250 AGCTGTATAGTATCCTTGGTTTGGAT 59.670 38.462 0.00 0.00 45.37 3.41
7108 7404 6.998673 GCTGTATAGTATCCTTGGTTTGGATT 59.001 38.462 0.38 0.00 41.13 3.01
7109 7405 8.154856 GCTGTATAGTATCCTTGGTTTGGATTA 58.845 37.037 0.38 0.00 41.13 1.75
7114 7410 7.707467 AGTATCCTTGGTTTGGATTATACCT 57.293 36.000 0.38 0.00 41.13 3.08
7115 7411 7.518188 AGTATCCTTGGTTTGGATTATACCTG 58.482 38.462 0.38 0.00 41.13 4.00
7116 7412 5.124036 TCCTTGGTTTGGATTATACCTGG 57.876 43.478 0.00 0.00 33.05 4.45
7117 7413 3.636764 CCTTGGTTTGGATTATACCTGGC 59.363 47.826 0.00 0.00 33.05 4.85
7118 7414 3.306472 TGGTTTGGATTATACCTGGCC 57.694 47.619 0.00 0.00 33.05 5.36
7119 7415 2.583101 TGGTTTGGATTATACCTGGCCA 59.417 45.455 4.71 4.71 33.05 5.36
7120 7416 3.011821 TGGTTTGGATTATACCTGGCCAA 59.988 43.478 7.01 0.00 36.88 4.52
7121 7417 4.027437 GGTTTGGATTATACCTGGCCAAA 58.973 43.478 7.01 9.12 43.94 3.28
7123 7419 3.306472 TGGATTATACCTGGCCAAACC 57.694 47.619 7.01 0.00 39.84 3.27
7124 7420 2.856231 TGGATTATACCTGGCCAAACCT 59.144 45.455 7.01 0.00 40.22 3.50
7125 7421 3.117663 TGGATTATACCTGGCCAAACCTC 60.118 47.826 7.01 0.00 40.22 3.85
7126 7422 2.702592 TTATACCTGGCCAAACCTCG 57.297 50.000 7.01 0.00 40.22 4.63
7127 7423 1.868713 TATACCTGGCCAAACCTCGA 58.131 50.000 7.01 0.00 40.22 4.04
7128 7424 0.541863 ATACCTGGCCAAACCTCGAG 59.458 55.000 7.01 5.13 40.22 4.04
7129 7425 2.180159 TACCTGGCCAAACCTCGAGC 62.180 60.000 7.01 0.00 40.22 5.03
7130 7426 2.747855 CTGGCCAAACCTCGAGCC 60.748 66.667 7.01 5.43 45.96 4.70
7137 7433 4.772231 AACCTCGAGCCGGGCCTA 62.772 66.667 17.02 0.00 0.00 3.93
7150 7446 4.522971 GCCTAGCCAAGTCCGAAG 57.477 61.111 0.00 0.00 0.00 3.79
7151 7447 1.815840 GCCTAGCCAAGTCCGAAGC 60.816 63.158 0.00 0.00 0.00 3.86
7152 7448 1.596934 CCTAGCCAAGTCCGAAGCA 59.403 57.895 0.00 0.00 0.00 3.91
7153 7449 0.036388 CCTAGCCAAGTCCGAAGCAA 60.036 55.000 0.00 0.00 0.00 3.91
7154 7450 1.610624 CCTAGCCAAGTCCGAAGCAAA 60.611 52.381 0.00 0.00 0.00 3.68
7155 7451 2.151202 CTAGCCAAGTCCGAAGCAAAA 58.849 47.619 0.00 0.00 0.00 2.44
7156 7452 1.398692 AGCCAAGTCCGAAGCAAAAA 58.601 45.000 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 1.174783 GGAGTAGGTCGAGCTTGACA 58.825 55.000 30.70 12.60 40.72 3.58
179 180 1.764571 TACCACGCCTTGACCTGCTT 61.765 55.000 0.00 0.00 0.00 3.91
350 354 4.671590 TGGACTGGCGGGAGTCGA 62.672 66.667 0.00 0.00 42.97 4.20
570 600 2.257541 TTTTGGGCCTTGGGGGTGAA 62.258 55.000 4.53 0.00 37.43 3.18
573 603 1.538629 CATTTTGGGCCTTGGGGGT 60.539 57.895 4.53 0.00 37.43 4.95
598 630 1.375523 CGCTACTTTGGCCCTTCGT 60.376 57.895 0.00 0.00 0.00 3.85
634 668 0.108615 CATCTTCACTCGTTCGGCCT 60.109 55.000 0.00 0.00 0.00 5.19
660 694 0.911769 AGACCATCAATCAAGGGCGA 59.088 50.000 0.00 0.00 34.90 5.54
665 699 5.007039 CCGTGAACATAGACCATCAATCAAG 59.993 44.000 0.00 0.00 0.00 3.02
690 724 2.200170 GACATGAAACCTGCGTGGCC 62.200 60.000 0.00 0.00 40.22 5.36
714 748 9.886132 GGATATAGGAATACGGTTGATAACAAT 57.114 33.333 0.00 0.00 38.32 2.71
729 763 5.531287 GCGTCACAAAAAGGGATATAGGAAT 59.469 40.000 0.00 0.00 0.00 3.01
787 823 1.318158 GCAAGAGGACCTGGCAATGG 61.318 60.000 0.00 0.00 41.61 3.16
788 824 1.318158 GGCAAGAGGACCTGGCAATG 61.318 60.000 0.00 0.00 43.87 2.82
804 840 4.947147 GGGGGCGCGATAATGGCA 62.947 66.667 12.10 0.00 0.00 4.92
822 858 3.121030 GATTGCAGCGACGTGGCT 61.121 61.111 20.15 20.15 46.13 4.75
823 859 3.121030 AGATTGCAGCGACGTGGC 61.121 61.111 15.38 15.38 0.00 5.01
825 861 2.097160 GCAGATTGCAGCGACGTG 59.903 61.111 0.00 0.00 44.26 4.49
879 919 2.515057 TGGCGTGGTGGTTGTGAC 60.515 61.111 0.00 0.00 0.00 3.67
905 945 2.689813 GTTTGGATGGGGGAGGGG 59.310 66.667 0.00 0.00 0.00 4.79
1073 1113 3.063997 CGCAGGATTAACTGGAACATGAC 59.936 47.826 0.00 0.00 38.20 3.06
1087 1127 0.604578 AACAAAGCATGCGCAGGATT 59.395 45.000 28.37 24.59 35.32 3.01
1146 1186 2.159462 GCATCAACAAGCTCAGGTAAGC 60.159 50.000 0.00 0.00 42.82 3.09
1149 1189 1.340017 GGGCATCAACAAGCTCAGGTA 60.340 52.381 0.00 0.00 0.00 3.08
1231 1271 3.450115 GAGTGCTAGGACGGCGGT 61.450 66.667 13.24 0.00 0.00 5.68
1256 1296 1.000019 GGCCCTACCTTTCCAACCC 60.000 63.158 0.00 0.00 34.51 4.11
1266 1306 1.304134 CCACACAAAGGGCCCTACC 60.304 63.158 28.96 0.00 37.93 3.18
1273 1313 0.673437 ATTTCGCACCACACAAAGGG 59.327 50.000 0.00 0.00 0.00 3.95
1290 1330 0.831307 GAACAGGGGAGCCGTCTATT 59.169 55.000 0.00 0.00 0.00 1.73
1442 1482 5.106442 TGTAATGCTACATACAAGGACACG 58.894 41.667 0.00 0.00 32.93 4.49
1496 1538 0.321653 AGCCACAAGCCTTTCTACCG 60.322 55.000 0.00 0.00 45.47 4.02
1569 1612 2.024918 GTGTGCCACCTTGTCACTG 58.975 57.895 0.00 0.00 0.00 3.66
1637 1681 2.848679 TCAGGGCACTGCTCACCA 60.849 61.111 12.37 0.00 44.54 4.17
1645 1689 1.451936 GGTGTCAAGTCAGGGCACT 59.548 57.895 0.00 0.00 0.00 4.40
1649 1693 2.358737 GGCGGTGTCAAGTCAGGG 60.359 66.667 0.00 0.00 0.00 4.45
1663 1707 0.461870 TGGCTACATTGCTACTGGCG 60.462 55.000 0.00 0.00 45.43 5.69
1665 1709 2.939103 GTTCTGGCTACATTGCTACTGG 59.061 50.000 0.00 0.00 0.00 4.00
1692 1736 0.906756 CACTGCCTCCTTCTCTCCCA 60.907 60.000 0.00 0.00 0.00 4.37
1693 1737 1.904032 CACTGCCTCCTTCTCTCCC 59.096 63.158 0.00 0.00 0.00 4.30
1723 1767 1.329171 CCTCACCTCCTCCTGCTCTG 61.329 65.000 0.00 0.00 0.00 3.35
1724 1768 1.001503 CCTCACCTCCTCCTGCTCT 59.998 63.158 0.00 0.00 0.00 4.09
1728 1772 0.975040 CACCTCCTCACCTCCTCCTG 60.975 65.000 0.00 0.00 0.00 3.86
1745 1789 3.672295 CTTCTCCCTCTGGCGCCAC 62.672 68.421 29.03 0.00 0.00 5.01
1746 1790 3.393970 CTTCTCCCTCTGGCGCCA 61.394 66.667 30.59 30.59 0.00 5.69
1747 1791 3.378399 GACTTCTCCCTCTGGCGCC 62.378 68.421 22.73 22.73 0.00 6.53
1748 1792 2.185608 GACTTCTCCCTCTGGCGC 59.814 66.667 0.00 0.00 0.00 6.53
1749 1793 0.682855 AGAGACTTCTCCCTCTGGCG 60.683 60.000 2.47 0.00 43.88 5.69
1750 1794 3.298320 AGAGACTTCTCCCTCTGGC 57.702 57.895 2.47 0.00 43.88 4.85
1753 1797 1.203112 TGTGCAGAGACTTCTCCCTCT 60.203 52.381 2.47 0.00 43.88 3.69
1754 1798 1.261480 TGTGCAGAGACTTCTCCCTC 58.739 55.000 2.47 0.00 43.88 4.30
1755 1799 1.622811 CTTGTGCAGAGACTTCTCCCT 59.377 52.381 2.47 0.00 43.88 4.20
1756 1800 1.338579 CCTTGTGCAGAGACTTCTCCC 60.339 57.143 2.47 0.00 43.88 4.30
1757 1801 1.620819 TCCTTGTGCAGAGACTTCTCC 59.379 52.381 2.47 0.00 43.88 3.71
1758 1802 3.006323 TCTTCCTTGTGCAGAGACTTCTC 59.994 47.826 0.00 0.00 43.17 2.87
1759 1803 2.968574 TCTTCCTTGTGCAGAGACTTCT 59.031 45.455 0.00 0.00 0.00 2.85
1760 1804 3.393089 TCTTCCTTGTGCAGAGACTTC 57.607 47.619 0.00 0.00 0.00 3.01
1761 1805 3.845781 TTCTTCCTTGTGCAGAGACTT 57.154 42.857 0.00 0.00 0.00 3.01
1766 1810 4.287067 ACTCCTTATTCTTCCTTGTGCAGA 59.713 41.667 0.00 0.00 0.00 4.26
1768 1812 4.579869 GACTCCTTATTCTTCCTTGTGCA 58.420 43.478 0.00 0.00 0.00 4.57
1787 1831 4.063967 TGCCCGAATCACGCGACT 62.064 61.111 15.93 0.00 41.07 4.18
1792 1836 1.154205 GGATCTGTGCCCGAATCACG 61.154 60.000 0.00 0.00 37.26 4.35
1806 1864 2.623889 GGACGTGCTACAGTATGGATCT 59.376 50.000 0.00 0.00 43.62 2.75
1814 1872 3.691118 TCTAATTACGGACGTGCTACAGT 59.309 43.478 5.27 0.00 0.00 3.55
1855 1913 3.748083 TGAGCTGAGCAATTTCTCAACT 58.252 40.909 10.26 10.26 41.99 3.16
1856 1914 4.155462 TGATGAGCTGAGCAATTTCTCAAC 59.845 41.667 7.39 4.93 41.99 3.18
1889 1952 9.354673 AGAACTTCAAATATTTTGGAACTGAGA 57.645 29.630 0.00 0.00 0.00 3.27
1893 1956 9.588096 ACCTAGAACTTCAAATATTTTGGAACT 57.412 29.630 0.00 0.00 0.00 3.01
1918 1981 9.573133 CATAAAGATGGTTGAATTAGGACAAAC 57.427 33.333 0.00 0.00 34.73 2.93
1934 1997 6.824305 AGACTTGGTCAAACATAAAGATGG 57.176 37.500 0.52 0.00 34.57 3.51
2086 2149 9.274206 AGGTTTGTCTTAAGTCAAACTTCTATC 57.726 33.333 35.38 25.43 46.04 2.08
2088 2151 9.760077 CTAGGTTTGTCTTAAGTCAAACTTCTA 57.240 33.333 35.38 29.61 46.04 2.10
2118 2181 6.263168 AGTCCATCCATTCCGAAATATTTGAC 59.737 38.462 5.17 2.51 0.00 3.18
2129 2192 9.137459 AGTTAGATATATAGTCCATCCATTCCG 57.863 37.037 0.00 0.00 0.00 4.30
2180 2243 5.180271 ACATCCAAACAATGAAATGATGCC 58.820 37.500 0.00 0.00 31.15 4.40
2186 2249 6.149807 GGAATGCAACATCCAAACAATGAAAT 59.850 34.615 10.69 0.00 35.71 2.17
2198 2261 3.615224 AAACATGGGAATGCAACATCC 57.385 42.857 7.78 7.78 34.85 3.51
2207 2270 2.028561 ACCTGGCAAAACATGGGAAT 57.971 45.000 0.00 0.00 0.00 3.01
2212 2275 3.457610 AAGTGAACCTGGCAAAACATG 57.542 42.857 0.00 0.00 0.00 3.21
2238 2301 5.588648 CCCGGTGCATAAAGAAAATCTCTTA 59.411 40.000 0.00 0.00 44.00 2.10
2258 2321 1.764571 TTGGTGGTGACTTCTCCCGG 61.765 60.000 0.00 0.00 0.00 5.73
2271 2334 7.559590 TTGTTTCAATGGTAAAAATTGGTGG 57.440 32.000 0.00 0.00 36.01 4.61
2319 2382 1.900486 AGTGGTGGAGTAACAGGTAGC 59.100 52.381 0.00 0.00 0.00 3.58
2391 2454 4.074970 CTGGTAGCTGTTCTCCAATTTGT 58.925 43.478 0.00 0.00 0.00 2.83
2473 2641 2.553904 GGAGCATAGCTGGTATTGGCAT 60.554 50.000 0.00 0.00 39.88 4.40
2515 2683 6.814146 AGGAGCGAAGTTTTACATAAGAAGAG 59.186 38.462 0.00 0.00 0.00 2.85
2516 2684 6.590292 CAGGAGCGAAGTTTTACATAAGAAGA 59.410 38.462 0.00 0.00 0.00 2.87
2517 2685 6.673316 GCAGGAGCGAAGTTTTACATAAGAAG 60.673 42.308 0.00 0.00 0.00 2.85
2548 2716 7.156876 AGCCTTTACATCATCAATTTCGAAA 57.843 32.000 13.91 13.91 0.00 3.46
2551 2719 5.745294 CCAAGCCTTTACATCATCAATTTCG 59.255 40.000 0.00 0.00 0.00 3.46
2557 2725 2.291475 TGCCCAAGCCTTTACATCATCA 60.291 45.455 0.00 0.00 38.69 3.07
2602 2770 6.679327 ATAAGGAAAAGACCGAAAGCATAC 57.321 37.500 0.00 0.00 34.73 2.39
2626 2794 5.819991 AGAAGATACCATGGAGCTTTTGAA 58.180 37.500 21.47 0.00 0.00 2.69
2686 2854 0.178301 GGGAAAGAGAGCTTACCCCG 59.822 60.000 0.00 0.00 37.37 5.73
2692 2860 1.352687 GTTGGGAGGGAAAGAGAGCTT 59.647 52.381 0.00 0.00 35.37 3.74
2709 2877 1.066257 GCACACCACAGGCAAGTTG 59.934 57.895 0.00 0.00 0.00 3.16
2713 2881 2.784356 GCAAGCACACCACAGGCAA 61.784 57.895 0.00 0.00 0.00 4.52
2747 2916 2.466846 CACAAGGACAAAAGCAAGCAG 58.533 47.619 0.00 0.00 0.00 4.24
2770 2939 7.630242 AAGACATCAATTAAATCGTGGACAT 57.370 32.000 0.00 0.00 0.00 3.06
2882 3051 7.505585 TCATAAGGGTAAATTAATGGCAGGAAG 59.494 37.037 0.00 0.00 0.00 3.46
2961 3130 6.669591 TGGAGATGATTATACAGGGAGGTATG 59.330 42.308 0.00 0.00 35.64 2.39
3006 3175 5.348724 TCGACTCATTAACTTGAATGACAGC 59.651 40.000 0.00 0.00 40.18 4.40
3007 3176 6.951256 TCGACTCATTAACTTGAATGACAG 57.049 37.500 0.00 0.00 40.18 3.51
3075 3244 4.570772 TGAGTCTTCTTGTTACAGTGCAAC 59.429 41.667 0.00 0.00 0.00 4.17
3090 3259 8.608317 GGCTTTCTTTGAAGTATATGAGTCTTC 58.392 37.037 0.00 0.00 38.30 2.87
3098 3267 7.148573 CGCGATATGGCTTTCTTTGAAGTATAT 60.149 37.037 0.00 0.00 0.00 0.86
3106 3275 3.885484 ATCGCGATATGGCTTTCTTTG 57.115 42.857 22.33 0.00 0.00 2.77
3110 3279 3.878086 TCAAATCGCGATATGGCTTTC 57.122 42.857 24.00 0.00 0.00 2.62
3146 3315 1.021202 CCAAAGCAGAACGTGGTTCA 58.979 50.000 10.74 0.00 46.38 3.18
3147 3316 1.002792 GACCAAAGCAGAACGTGGTTC 60.003 52.381 0.00 0.32 46.38 3.62
3159 3328 6.691508 AGGTAAGAATTTGAATGACCAAAGC 58.308 36.000 0.00 0.00 39.13 3.51
3177 3346 5.952347 ACCTGGAGTTATACCAAGGTAAG 57.048 43.478 0.00 0.00 37.26 2.34
3237 3406 9.548208 CTTAAGAAAGAAGACGATTCAATTTCC 57.452 33.333 0.00 0.00 34.37 3.13
3259 3428 9.930158 ATAACCAACTATAATTGCCTTCCTTAA 57.070 29.630 0.00 0.00 0.00 1.85
3277 3446 3.477530 GCCTGATAGGACCATAACCAAC 58.522 50.000 0.00 0.00 37.67 3.77
3329 3498 4.930696 TGTGACTAGAGAGATGTTGGGTA 58.069 43.478 0.00 0.00 0.00 3.69
3344 3513 3.760738 TGGCCATCAAAACATGTGACTA 58.239 40.909 0.00 0.00 0.00 2.59
3346 3515 3.194116 AGATGGCCATCAAAACATGTGAC 59.806 43.478 40.05 15.26 40.22 3.67
3377 3546 7.977853 CCTGGAGGAATTCATGAAAAGTAATTG 59.022 37.037 13.09 1.05 37.39 2.32
3383 3552 3.765511 TGCCTGGAGGAATTCATGAAAAG 59.234 43.478 13.09 2.22 37.39 2.27
3386 3555 3.454719 TTGCCTGGAGGAATTCATGAA 57.545 42.857 11.26 11.26 37.39 2.57
3469 3638 2.846827 CCCTAGGGAGTTCATTTGGTCT 59.153 50.000 24.99 0.00 37.50 3.85
3471 3640 2.308866 CACCCTAGGGAGTTCATTTGGT 59.691 50.000 35.38 3.78 38.96 3.67
3558 3727 0.107703 TGAACCAGCCAGCTATTCCG 60.108 55.000 11.34 0.00 0.00 4.30
3570 3739 3.803778 GCATGAACCAAAACTTGAACCAG 59.196 43.478 0.00 0.00 0.00 4.00
3582 3751 1.487300 CCATCCATGGCATGAACCAA 58.513 50.000 28.43 8.72 44.65 3.67
3718 3888 9.851686 TTCTCTATATTGGCATTTGTGTTCTAT 57.148 29.630 0.00 0.00 0.00 1.98
3736 3906 7.756614 TCCTGCTCCTATACAACTTCTCTATA 58.243 38.462 0.00 0.00 0.00 1.31
3765 3936 6.268566 TGCTATAATATCTGCTACATGCGAG 58.731 40.000 0.00 0.00 46.63 5.03
3836 4007 9.860898 AAATTATTTGAAGTTCTAGCATTGTCC 57.139 29.630 4.17 0.00 0.00 4.02
3842 4013 8.020819 CGTTCCAAATTATTTGAAGTTCTAGCA 58.979 33.333 18.13 0.00 43.26 3.49
3852 4023 4.924625 TCCCTCCGTTCCAAATTATTTGA 58.075 39.130 18.13 3.02 43.26 2.69
3858 4029 4.270008 CAGTATTCCCTCCGTTCCAAATT 58.730 43.478 0.00 0.00 0.00 1.82
3863 4034 0.539986 TGCAGTATTCCCTCCGTTCC 59.460 55.000 0.00 0.00 0.00 3.62
3909 4080 1.701847 ACTTCCACAGCTGAACAGGAT 59.298 47.619 23.35 5.27 0.00 3.24
3959 4130 8.243426 GCTCAAGTGTTCATTATTCAATTACCA 58.757 33.333 0.00 0.00 0.00 3.25
3960 4131 7.702348 GGCTCAAGTGTTCATTATTCAATTACC 59.298 37.037 0.00 0.00 0.00 2.85
3961 4132 7.702348 GGGCTCAAGTGTTCATTATTCAATTAC 59.298 37.037 0.00 0.00 0.00 1.89
3962 4133 7.395772 TGGGCTCAAGTGTTCATTATTCAATTA 59.604 33.333 0.00 0.00 0.00 1.40
3963 4134 6.211184 TGGGCTCAAGTGTTCATTATTCAATT 59.789 34.615 0.00 0.00 0.00 2.32
3964 4135 5.716228 TGGGCTCAAGTGTTCATTATTCAAT 59.284 36.000 0.00 0.00 0.00 2.57
3965 4136 5.048083 GTGGGCTCAAGTGTTCATTATTCAA 60.048 40.000 0.00 0.00 0.00 2.69
3966 4137 4.458989 GTGGGCTCAAGTGTTCATTATTCA 59.541 41.667 0.00 0.00 0.00 2.57
3967 4138 4.142381 GGTGGGCTCAAGTGTTCATTATTC 60.142 45.833 0.00 0.00 0.00 1.75
3968 4139 3.763897 GGTGGGCTCAAGTGTTCATTATT 59.236 43.478 0.00 0.00 0.00 1.40
3969 4140 3.245229 TGGTGGGCTCAAGTGTTCATTAT 60.245 43.478 0.00 0.00 0.00 1.28
3970 4141 2.107378 TGGTGGGCTCAAGTGTTCATTA 59.893 45.455 0.00 0.00 0.00 1.90
3971 4142 1.133513 TGGTGGGCTCAAGTGTTCATT 60.134 47.619 0.00 0.00 0.00 2.57
3972 4143 0.478072 TGGTGGGCTCAAGTGTTCAT 59.522 50.000 0.00 0.00 0.00 2.57
3973 4144 0.179020 CTGGTGGGCTCAAGTGTTCA 60.179 55.000 0.00 0.00 0.00 3.18
3977 4148 2.787473 TAATCTGGTGGGCTCAAGTG 57.213 50.000 0.00 0.00 0.00 3.16
3994 4165 5.586243 GCACAATTGGCAGTCTTCTAGATAA 59.414 40.000 10.83 0.00 0.00 1.75
4008 4179 0.033781 TGGAAGCTTGCACAATTGGC 59.966 50.000 17.55 10.82 0.00 4.52
4014 4185 1.055849 TCTAGGTGGAAGCTTGCACA 58.944 50.000 40.16 26.01 46.63 4.57
4063 4234 1.759445 CCTATGGCTCCGATGGGATAG 59.241 57.143 0.00 0.00 42.83 2.08
4070 4241 3.425162 GGAAAATCCTATGGCTCCGAT 57.575 47.619 0.00 0.00 32.53 4.18
4103 4274 1.985159 ACTGGGTGCAGAGAATTGGTA 59.015 47.619 0.00 0.00 0.00 3.25
4106 4277 2.189594 TCACTGGGTGCAGAGAATTG 57.810 50.000 0.00 0.00 32.98 2.32
4125 4296 7.341805 TGTACCTTCCTAGTTCGTACTAAGAT 58.658 38.462 3.40 0.00 36.46 2.40
4134 4305 5.184711 ACTAGTCTGTACCTTCCTAGTTCG 58.815 45.833 0.00 0.00 35.92 3.95
4184 4355 1.739466 TGTTCGCAGCATTGGAAGATC 59.261 47.619 0.00 0.00 0.00 2.75
4227 4398 7.808218 TCCCTCCGTTCCAAAATAAGTATTAT 58.192 34.615 0.00 0.00 44.67 1.28
4229 4400 6.069705 TCCCTCCGTTCCAAAATAAGTATT 57.930 37.500 0.00 0.00 0.00 1.89
4230 4401 5.191124 ACTCCCTCCGTTCCAAAATAAGTAT 59.809 40.000 0.00 0.00 0.00 2.12
4231 4402 4.533311 ACTCCCTCCGTTCCAAAATAAGTA 59.467 41.667 0.00 0.00 0.00 2.24
4232 4403 3.329814 ACTCCCTCCGTTCCAAAATAAGT 59.670 43.478 0.00 0.00 0.00 2.24
4234 4405 4.533311 AGTACTCCCTCCGTTCCAAAATAA 59.467 41.667 0.00 0.00 0.00 1.40
4236 4407 2.910977 AGTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
4237 4408 2.332117 AGTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
4238 4409 2.019807 AGTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
4239 4410 2.731572 CTAGTACTCCCTCCGTTCCAA 58.268 52.381 0.00 0.00 0.00 3.53
4241 4412 1.031235 GCTAGTACTCCCTCCGTTCC 58.969 60.000 0.00 0.00 0.00 3.62
4243 4414 0.333993 TGGCTAGTACTCCCTCCGTT 59.666 55.000 0.00 0.00 0.00 4.44
4245 4416 1.033574 CTTGGCTAGTACTCCCTCCG 58.966 60.000 0.00 0.00 0.00 4.63
4246 4417 1.063114 TCCTTGGCTAGTACTCCCTCC 60.063 57.143 0.00 0.00 0.00 4.30
4249 4420 2.838813 AGTTTCCTTGGCTAGTACTCCC 59.161 50.000 0.00 1.65 0.00 4.30
4250 4421 4.554960 AAGTTTCCTTGGCTAGTACTCC 57.445 45.455 0.00 0.00 0.00 3.85
4251 4422 5.120363 CGAAAAGTTTCCTTGGCTAGTACTC 59.880 44.000 0.00 0.00 33.68 2.59
4252 4423 4.995487 CGAAAAGTTTCCTTGGCTAGTACT 59.005 41.667 0.00 0.00 33.68 2.73
4253 4424 4.153655 CCGAAAAGTTTCCTTGGCTAGTAC 59.846 45.833 0.00 0.00 33.68 2.73
4254 4425 4.320870 CCGAAAAGTTTCCTTGGCTAGTA 58.679 43.478 0.00 0.00 33.68 1.82
4255 4426 3.146847 CCGAAAAGTTTCCTTGGCTAGT 58.853 45.455 0.00 0.00 33.68 2.57
4256 4427 2.095212 GCCGAAAAGTTTCCTTGGCTAG 60.095 50.000 10.28 0.00 37.86 3.42
4257 4428 1.883926 GCCGAAAAGTTTCCTTGGCTA 59.116 47.619 10.28 0.00 37.86 3.93
4258 4429 0.673985 GCCGAAAAGTTTCCTTGGCT 59.326 50.000 10.28 0.00 37.86 4.75
4259 4430 0.387565 TGCCGAAAAGTTTCCTTGGC 59.612 50.000 10.55 10.55 39.86 4.52
4262 4433 2.882137 TCGAATGCCGAAAAGTTTCCTT 59.118 40.909 0.00 0.00 45.43 3.36
4278 4449 2.124736 CGCACCCCATGGTCGAAT 60.125 61.111 11.73 0.00 45.57 3.34
4279 4450 4.402528 CCGCACCCCATGGTCGAA 62.403 66.667 11.73 0.00 45.57 3.71
4287 4458 2.359354 CGATTCAACCGCACCCCA 60.359 61.111 0.00 0.00 0.00 4.96
4292 4463 3.196007 GAATTGTTCGATTCAACCGCA 57.804 42.857 5.85 0.00 36.32 5.69
4303 4474 2.805671 TGCTATATGCCCGAATTGTTCG 59.194 45.455 5.19 5.19 45.29 3.95
4304 4475 3.058224 GGTGCTATATGCCCGAATTGTTC 60.058 47.826 0.00 0.00 42.00 3.18
4306 4477 2.504367 GGTGCTATATGCCCGAATTGT 58.496 47.619 0.00 0.00 42.00 2.71
4309 4480 1.064003 TGGGTGCTATATGCCCGAAT 58.936 50.000 0.00 0.00 45.19 3.34
4310 4481 0.107831 GTGGGTGCTATATGCCCGAA 59.892 55.000 0.00 0.00 45.19 4.30
4311 4482 0.762842 AGTGGGTGCTATATGCCCGA 60.763 55.000 0.00 0.00 45.19 5.14
4312 4483 0.320771 GAGTGGGTGCTATATGCCCG 60.321 60.000 0.00 0.00 45.19 6.13
4313 4484 0.036875 GGAGTGGGTGCTATATGCCC 59.963 60.000 0.00 0.00 42.00 5.36
4314 4485 1.059913 AGGAGTGGGTGCTATATGCC 58.940 55.000 0.00 0.00 42.00 4.40
4315 4486 2.938956 AAGGAGTGGGTGCTATATGC 57.061 50.000 0.00 0.00 43.25 3.14
4318 4489 4.966168 TGACATAAAGGAGTGGGTGCTATA 59.034 41.667 0.00 0.00 0.00 1.31
4336 4521 1.133823 TGTCCTGTGCTTGGTTGACAT 60.134 47.619 0.00 0.00 0.00 3.06
4338 4523 1.334869 CTTGTCCTGTGCTTGGTTGAC 59.665 52.381 0.00 0.00 0.00 3.18
4389 4575 3.634072 GTATGCTGCTCGCCTGCG 61.634 66.667 4.92 4.92 40.88 5.18
4406 4592 3.376935 ATCGCCGGCTGAACCTCAG 62.377 63.158 26.68 5.22 46.90 3.35
4407 4593 3.390521 ATCGCCGGCTGAACCTCA 61.391 61.111 26.68 1.18 35.61 3.86
4408 4594 2.892425 CATCGCCGGCTGAACCTC 60.892 66.667 26.68 0.00 35.61 3.85
4420 4606 2.584065 CGACTAGCTGCAGCATCGC 61.584 63.158 38.24 23.19 45.16 4.58
4421 4607 1.226802 ACGACTAGCTGCAGCATCG 60.227 57.895 37.21 37.21 45.16 3.84
4422 4608 1.150567 CCACGACTAGCTGCAGCATC 61.151 60.000 38.24 28.78 45.16 3.91
4423 4609 1.153489 CCACGACTAGCTGCAGCAT 60.153 57.895 38.24 24.10 45.16 3.79
4424 4610 2.262603 CCACGACTAGCTGCAGCA 59.737 61.111 38.24 23.25 45.16 4.41
4425 4611 3.191539 GCCACGACTAGCTGCAGC 61.192 66.667 31.53 31.53 42.49 5.25
4426 4612 2.882777 CGCCACGACTAGCTGCAG 60.883 66.667 10.11 10.11 0.00 4.41
4427 4613 4.435436 CCGCCACGACTAGCTGCA 62.435 66.667 1.02 0.00 0.00 4.41
4428 4614 4.129737 TCCGCCACGACTAGCTGC 62.130 66.667 0.00 0.00 0.00 5.25
4429 4615 1.934220 TTCTCCGCCACGACTAGCTG 61.934 60.000 0.00 0.00 0.00 4.24
4430 4616 1.658686 CTTCTCCGCCACGACTAGCT 61.659 60.000 0.00 0.00 0.00 3.32
4431 4617 1.226717 CTTCTCCGCCACGACTAGC 60.227 63.158 0.00 0.00 0.00 3.42
4432 4618 1.433879 CCTTCTCCGCCACGACTAG 59.566 63.158 0.00 0.00 0.00 2.57
4433 4619 2.050350 CCCTTCTCCGCCACGACTA 61.050 63.158 0.00 0.00 0.00 2.59
4434 4620 3.382832 CCCTTCTCCGCCACGACT 61.383 66.667 0.00 0.00 0.00 4.18
4438 4624 4.785453 CCTGCCCTTCTCCGCCAC 62.785 72.222 0.00 0.00 0.00 5.01
4440 4626 4.785453 CACCTGCCCTTCTCCGCC 62.785 72.222 0.00 0.00 0.00 6.13
4444 4630 0.980423 ACTTCTCACCTGCCCTTCTC 59.020 55.000 0.00 0.00 0.00 2.87
4449 4635 1.374758 CGTCACTTCTCACCTGCCC 60.375 63.158 0.00 0.00 0.00 5.36
4456 4642 1.340248 GTCAGGGTTCGTCACTTCTCA 59.660 52.381 0.00 0.00 0.00 3.27
4463 4649 2.203523 TCGGGTCAGGGTTCGTCA 60.204 61.111 0.00 0.00 0.00 4.35
4466 4652 0.172803 CTAAGTCGGGTCAGGGTTCG 59.827 60.000 0.00 0.00 0.00 3.95
4469 4655 0.338814 ATCCTAAGTCGGGTCAGGGT 59.661 55.000 0.00 0.00 0.00 4.34
4471 4657 2.628657 CCTAATCCTAAGTCGGGTCAGG 59.371 54.545 0.00 0.00 0.00 3.86
4472 4658 2.628657 CCCTAATCCTAAGTCGGGTCAG 59.371 54.545 0.00 0.00 0.00 3.51
4473 4659 2.023695 ACCCTAATCCTAAGTCGGGTCA 60.024 50.000 0.00 0.00 40.81 4.02
4483 4684 1.370340 TCACCCCCAACCCTAATCCTA 59.630 52.381 0.00 0.00 0.00 2.94
4487 4688 0.702316 GTGTCACCCCCAACCCTAAT 59.298 55.000 0.00 0.00 0.00 1.73
4506 4707 3.982372 TTCTTCGCTAGCGCCGGTG 62.982 63.158 31.82 11.67 39.59 4.94
4507 4708 2.955751 GATTCTTCGCTAGCGCCGGT 62.956 60.000 31.82 15.90 39.59 5.28
4519 4720 0.105778 CTCGGAGGGCCAGATTCTTC 59.894 60.000 6.18 0.00 0.00 2.87
4525 4726 2.317040 CTATAAACTCGGAGGGCCAGA 58.683 52.381 6.18 0.62 0.00 3.86
4537 4738 1.907255 GCCCGGCTATCCCTATAAACT 59.093 52.381 0.71 0.00 0.00 2.66
4539 4740 0.899720 CGCCCGGCTATCCCTATAAA 59.100 55.000 8.05 0.00 0.00 1.40
4564 4766 2.664081 CCACCTCCTCTGCTGGTCC 61.664 68.421 0.00 0.00 30.72 4.46
4569 4771 3.007920 CCAGCCACCTCCTCTGCT 61.008 66.667 0.00 0.00 33.52 4.24
4589 4791 3.322466 CCTCGTCACCCTGCCCTT 61.322 66.667 0.00 0.00 0.00 3.95
4630 4832 3.197790 CGCCATCTTCTGCCACCG 61.198 66.667 0.00 0.00 0.00 4.94
4633 4835 0.107703 CTAACCGCCATCTTCTGCCA 60.108 55.000 0.00 0.00 0.00 4.92
4634 4836 0.815615 CCTAACCGCCATCTTCTGCC 60.816 60.000 0.00 0.00 0.00 4.85
4635 4837 1.440145 GCCTAACCGCCATCTTCTGC 61.440 60.000 0.00 0.00 0.00 4.26
4636 4838 2.695314 GCCTAACCGCCATCTTCTG 58.305 57.895 0.00 0.00 0.00 3.02
4660 4862 3.959991 GAACAGCCGCCTCCCTGAC 62.960 68.421 0.00 0.00 33.40 3.51
4665 4881 0.179018 ATATTGGAACAGCCGCCTCC 60.179 55.000 0.00 0.00 42.39 4.30
4674 4890 1.742831 GCCGCTGTTGATATTGGAACA 59.257 47.619 0.00 0.00 0.00 3.18
4680 4896 1.229428 CCATCGCCGCTGTTGATATT 58.771 50.000 0.00 0.00 0.00 1.28
4681 4897 0.106708 ACCATCGCCGCTGTTGATAT 59.893 50.000 0.00 0.00 0.00 1.63
4682 4898 0.107897 AACCATCGCCGCTGTTGATA 60.108 50.000 0.00 0.00 0.00 2.15
4685 4901 1.003262 CAAAACCATCGCCGCTGTTG 61.003 55.000 0.00 0.00 0.00 3.33
4688 4904 1.154225 GTCAAAACCATCGCCGCTG 60.154 57.895 0.00 0.00 0.00 5.18
4689 4905 2.332654 GGTCAAAACCATCGCCGCT 61.333 57.895 0.00 0.00 45.68 5.52
4690 4906 2.178273 GGTCAAAACCATCGCCGC 59.822 61.111 0.00 0.00 45.68 6.53
4702 4918 2.428491 ACACTGTCGTTTTGTGGTCAA 58.572 42.857 0.00 0.00 36.16 3.18
4703 4919 2.102070 ACACTGTCGTTTTGTGGTCA 57.898 45.000 0.00 0.00 36.16 4.02
4706 4922 2.286184 GCTGTACACTGTCGTTTTGTGG 60.286 50.000 0.00 0.00 36.16 4.17
4734 4950 0.095935 CTTTGCTGCAGTCGATTCCG 59.904 55.000 16.64 0.00 37.07 4.30
4735 4951 1.160137 ACTTTGCTGCAGTCGATTCC 58.840 50.000 16.64 0.00 0.00 3.01
4746 4962 0.877071 ATCACAGGCGAACTTTGCTG 59.123 50.000 0.92 0.00 0.00 4.41
4749 4965 2.290367 TGTTGATCACAGGCGAACTTTG 59.710 45.455 0.00 0.00 0.00 2.77
4750 4966 2.571212 TGTTGATCACAGGCGAACTTT 58.429 42.857 0.00 0.00 0.00 2.66
4751 4967 2.254546 TGTTGATCACAGGCGAACTT 57.745 45.000 0.00 0.00 0.00 2.66
4757 4973 6.624423 AGTTAATTCATTGTTGATCACAGGC 58.376 36.000 0.00 0.00 36.48 4.85
4763 4979 6.127647 TGCTGGGAGTTAATTCATTGTTGATC 60.128 38.462 0.03 0.00 0.00 2.92
4767 4983 6.610075 ATTGCTGGGAGTTAATTCATTGTT 57.390 33.333 0.03 0.00 0.00 2.83
4770 4986 7.775120 CAAGTATTGCTGGGAGTTAATTCATT 58.225 34.615 0.03 0.00 40.39 2.57
4817 5033 0.598562 TCTGTCAGTGTCTTCGAGGC 59.401 55.000 0.00 0.00 0.00 4.70
4820 5036 3.490933 CCTTGTTCTGTCAGTGTCTTCGA 60.491 47.826 0.00 0.00 0.00 3.71
4821 5037 2.797156 CCTTGTTCTGTCAGTGTCTTCG 59.203 50.000 0.00 0.00 0.00 3.79
4822 5038 4.060038 TCCTTGTTCTGTCAGTGTCTTC 57.940 45.455 0.00 0.00 0.00 2.87
4824 5040 4.384056 CATTCCTTGTTCTGTCAGTGTCT 58.616 43.478 0.00 0.00 0.00 3.41
4825 5041 3.058639 GCATTCCTTGTTCTGTCAGTGTC 60.059 47.826 0.00 0.00 0.00 3.67
4826 5042 2.880890 GCATTCCTTGTTCTGTCAGTGT 59.119 45.455 0.00 0.00 0.00 3.55
4827 5043 2.880268 TGCATTCCTTGTTCTGTCAGTG 59.120 45.455 0.00 0.00 0.00 3.66
4828 5044 3.213206 TGCATTCCTTGTTCTGTCAGT 57.787 42.857 0.00 0.00 0.00 3.41
4829 5045 4.696877 TGTATGCATTCCTTGTTCTGTCAG 59.303 41.667 3.54 0.00 0.00 3.51
4830 5046 4.650734 TGTATGCATTCCTTGTTCTGTCA 58.349 39.130 3.54 0.00 0.00 3.58
4831 5047 5.824904 ATGTATGCATTCCTTGTTCTGTC 57.175 39.130 3.54 0.00 29.54 3.51
4832 5048 7.701539 TTTATGTATGCATTCCTTGTTCTGT 57.298 32.000 3.54 0.00 36.58 3.41
4833 5049 8.984891 TTTTTATGTATGCATTCCTTGTTCTG 57.015 30.769 3.54 0.00 36.58 3.02
4835 5051 9.807649 ATCTTTTTATGTATGCATTCCTTGTTC 57.192 29.630 3.54 0.00 36.58 3.18
4857 5102 9.273016 CGTAACTTGGACCAATATCATTATCTT 57.727 33.333 7.54 0.00 0.00 2.40
4865 5110 8.433126 CGATATTTCGTAACTTGGACCAATATC 58.567 37.037 7.54 7.81 40.53 1.63
4882 5127 9.573102 CTCATAAACAATGAAGTCGATATTTCG 57.427 33.333 0.00 0.00 44.05 3.46
4889 5134 6.370593 GCAAACTCATAAACAATGAAGTCGA 58.629 36.000 0.00 0.00 44.05 4.20
4891 5136 6.142817 ACGCAAACTCATAAACAATGAAGTC 58.857 36.000 0.00 0.00 44.05 3.01
4942 5187 8.239314 TGCTCATCTGAAGCAAATAGTTTAAAG 58.761 33.333 1.67 0.00 35.46 1.85
4976 5221 2.169352 AGGAGCAGTGTGATGTACCATC 59.831 50.000 0.00 0.00 0.00 3.51
4982 5227 4.039730 GGTATATGAGGAGCAGTGTGATGT 59.960 45.833 0.00 0.00 0.00 3.06
5117 5362 8.837788 TCATAACAAGAGTCCTAATATGCATG 57.162 34.615 10.16 0.00 0.00 4.06
5151 5396 8.027189 AGAACACTTCCTGAAAGTTTGTTTAAC 58.973 33.333 0.00 0.00 46.26 2.01
5189 5434 9.223099 TGTCATACTAATTCCATATGCAATGAG 57.777 33.333 2.50 2.50 0.00 2.90
5213 5458 8.947055 AATGCAAAGTCTTTGTTTTATCTTGT 57.053 26.923 23.07 0.77 42.56 3.16
5227 5472 6.359617 CGTCGTTTTATTTGAATGCAAAGTCT 59.640 34.615 4.87 0.00 46.27 3.24
5238 5483 5.509972 GCACAATATGCGTCGTTTTATTTGA 59.490 36.000 0.00 0.00 46.55 2.69
5253 5498 6.148150 AGGCAAAGAAACAAATGCACAATATG 59.852 34.615 0.00 0.00 40.51 1.78
5254 5499 6.232692 AGGCAAAGAAACAAATGCACAATAT 58.767 32.000 0.00 0.00 40.51 1.28
5261 5506 4.571984 ACTGAAAGGCAAAGAAACAAATGC 59.428 37.500 0.00 0.00 39.30 3.56
5270 5515 8.474025 TCTTAATTTTCAACTGAAAGGCAAAGA 58.526 29.630 5.13 9.69 43.90 2.52
5274 5519 8.257306 AGTTTCTTAATTTTCAACTGAAAGGCA 58.743 29.630 5.13 0.00 43.90 4.75
5283 5528 7.918562 TGCTGGTGTAGTTTCTTAATTTTCAAC 59.081 33.333 0.00 0.00 0.00 3.18
5312 5557 8.674263 ATTTGCAATCCAGAAACATAAAACAA 57.326 26.923 0.00 0.00 0.00 2.83
5316 5561 9.504708 AAATGATTTGCAATCCAGAAACATAAA 57.495 25.926 0.00 0.00 0.00 1.40
5317 5562 9.504708 AAAATGATTTGCAATCCAGAAACATAA 57.495 25.926 0.00 0.00 0.00 1.90
5318 5563 9.504708 AAAAATGATTTGCAATCCAGAAACATA 57.495 25.926 0.00 0.00 0.00 2.29
5336 5581 7.174772 GGCACTTTACCCAAAATGAAAAATGAT 59.825 33.333 0.00 0.00 0.00 2.45
5353 5598 5.858381 TCATATCCTCTCATGGCACTTTAC 58.142 41.667 0.00 0.00 0.00 2.01
5373 5618 1.215423 GTACTTGGAAGGCCCCATCAT 59.785 52.381 0.00 0.00 35.87 2.45
5375 5620 0.623723 TGTACTTGGAAGGCCCCATC 59.376 55.000 0.00 0.00 35.87 3.51
5413 5660 5.246307 ACTCCACAGTTCAATTAAGCCTAC 58.754 41.667 0.00 0.00 0.00 3.18
5430 5677 3.056465 CAGAACTAGGACCAGAACTCCAC 60.056 52.174 0.00 0.00 0.00 4.02
5450 5697 7.481642 AGTTGAGTACCATTCTATTCGTACAG 58.518 38.462 0.00 0.00 34.77 2.74
5451 5698 7.400599 AGTTGAGTACCATTCTATTCGTACA 57.599 36.000 0.00 0.00 34.77 2.90
5453 5700 7.972277 GTGAAGTTGAGTACCATTCTATTCGTA 59.028 37.037 0.00 0.00 0.00 3.43
5456 5703 8.779354 AAGTGAAGTTGAGTACCATTCTATTC 57.221 34.615 0.00 0.00 0.00 1.75
5459 5706 6.387465 CGAAGTGAAGTTGAGTACCATTCTA 58.613 40.000 0.00 0.00 0.00 2.10
5460 5707 5.230942 CGAAGTGAAGTTGAGTACCATTCT 58.769 41.667 0.00 0.00 0.00 2.40
5462 5709 3.746492 GCGAAGTGAAGTTGAGTACCATT 59.254 43.478 0.00 0.00 0.00 3.16
5463 5710 3.006967 AGCGAAGTGAAGTTGAGTACCAT 59.993 43.478 0.00 0.00 0.00 3.55
5464 5711 2.364324 AGCGAAGTGAAGTTGAGTACCA 59.636 45.455 0.00 0.00 0.00 3.25
5465 5712 2.731976 CAGCGAAGTGAAGTTGAGTACC 59.268 50.000 0.00 0.00 0.00 3.34
5466 5713 3.639538 TCAGCGAAGTGAAGTTGAGTAC 58.360 45.455 0.00 0.00 0.00 2.73
5467 5714 4.299155 CTTCAGCGAAGTGAAGTTGAGTA 58.701 43.478 12.17 0.00 45.73 2.59
5468 5715 2.890808 TCAGCGAAGTGAAGTTGAGT 57.109 45.000 0.00 0.00 0.00 3.41
5469 5716 3.784883 CTTCAGCGAAGTGAAGTTGAG 57.215 47.619 12.17 0.00 45.73 3.02
5483 5730 6.203530 TGCACTAATATTAGATGCACTTCAGC 59.796 38.462 29.13 17.59 39.97 4.26
5550 5797 4.323417 TCACAGTTTCGCATACATCCTTT 58.677 39.130 0.00 0.00 0.00 3.11
5600 5847 8.062065 ACTCATGTTCACCTAAAGTTCAAAAA 57.938 30.769 0.00 0.00 0.00 1.94
5601 5848 7.639113 ACTCATGTTCACCTAAAGTTCAAAA 57.361 32.000 0.00 0.00 0.00 2.44
5602 5849 8.740123 TTACTCATGTTCACCTAAAGTTCAAA 57.260 30.769 0.00 0.00 0.00 2.69
5603 5850 8.740123 TTTACTCATGTTCACCTAAAGTTCAA 57.260 30.769 0.00 0.00 0.00 2.69
5604 5851 8.918202 ATTTACTCATGTTCACCTAAAGTTCA 57.082 30.769 0.00 0.00 0.00 3.18
5605 5852 8.999431 TGATTTACTCATGTTCACCTAAAGTTC 58.001 33.333 0.00 0.00 0.00 3.01
5606 5853 8.918202 TGATTTACTCATGTTCACCTAAAGTT 57.082 30.769 0.00 0.00 0.00 2.66
5607 5854 8.918202 TTGATTTACTCATGTTCACCTAAAGT 57.082 30.769 0.00 0.00 32.72 2.66
5610 5857 9.513906 TGATTTGATTTACTCATGTTCACCTAA 57.486 29.630 0.00 0.00 32.72 2.69
5611 5858 9.685276 ATGATTTGATTTACTCATGTTCACCTA 57.315 29.630 0.00 0.00 32.72 3.08
5627 5874 5.716703 ACGGGAAAAGGAAGATGATTTGATT 59.283 36.000 0.00 0.00 0.00 2.57
5632 5879 4.576330 AGACGGGAAAAGGAAGATGATT 57.424 40.909 0.00 0.00 0.00 2.57
5633 5880 4.443598 GCTAGACGGGAAAAGGAAGATGAT 60.444 45.833 0.00 0.00 0.00 2.45
5634 5881 3.118738 GCTAGACGGGAAAAGGAAGATGA 60.119 47.826 0.00 0.00 0.00 2.92
5635 5882 3.198872 GCTAGACGGGAAAAGGAAGATG 58.801 50.000 0.00 0.00 0.00 2.90
5677 5924 9.471702 AGGAAGATGATTTGATTTACTCATGTT 57.528 29.630 0.00 0.00 35.18 2.71
5678 5925 9.471702 AAGGAAGATGATTTGATTTACTCATGT 57.528 29.630 0.00 0.00 32.72 3.21
5682 5929 9.794685 GGAAAAGGAAGATGATTTGATTTACTC 57.205 33.333 0.00 0.00 0.00 2.59
5683 5930 8.753133 GGGAAAAGGAAGATGATTTGATTTACT 58.247 33.333 0.00 0.00 0.00 2.24
5684 5931 7.702348 CGGGAAAAGGAAGATGATTTGATTTAC 59.298 37.037 0.00 0.00 0.00 2.01
5685 5932 7.396055 ACGGGAAAAGGAAGATGATTTGATTTA 59.604 33.333 0.00 0.00 0.00 1.40
5686 5933 6.211384 ACGGGAAAAGGAAGATGATTTGATTT 59.789 34.615 0.00 0.00 0.00 2.17
5687 5934 5.716703 ACGGGAAAAGGAAGATGATTTGATT 59.283 36.000 0.00 0.00 0.00 2.57
5688 5935 5.264395 ACGGGAAAAGGAAGATGATTTGAT 58.736 37.500 0.00 0.00 0.00 2.57
5689 5936 4.662278 ACGGGAAAAGGAAGATGATTTGA 58.338 39.130 0.00 0.00 0.00 2.69
5690 5937 4.702131 AGACGGGAAAAGGAAGATGATTTG 59.298 41.667 0.00 0.00 0.00 2.32
5691 5938 4.923415 AGACGGGAAAAGGAAGATGATTT 58.077 39.130 0.00 0.00 0.00 2.17
5692 5939 4.576330 AGACGGGAAAAGGAAGATGATT 57.424 40.909 0.00 0.00 0.00 2.57
5693 5940 4.443598 GCTAGACGGGAAAAGGAAGATGAT 60.444 45.833 0.00 0.00 0.00 2.45
5694 5941 3.118738 GCTAGACGGGAAAAGGAAGATGA 60.119 47.826 0.00 0.00 0.00 2.92
5695 5942 3.198872 GCTAGACGGGAAAAGGAAGATG 58.801 50.000 0.00 0.00 0.00 2.90
5696 5943 2.170817 GGCTAGACGGGAAAAGGAAGAT 59.829 50.000 0.00 0.00 0.00 2.40
5697 5944 1.553704 GGCTAGACGGGAAAAGGAAGA 59.446 52.381 0.00 0.00 0.00 2.87
5698 5945 1.278127 TGGCTAGACGGGAAAAGGAAG 59.722 52.381 0.00 0.00 0.00 3.46
5699 5946 1.354101 TGGCTAGACGGGAAAAGGAA 58.646 50.000 0.00 0.00 0.00 3.36
5700 5947 1.002773 GTTGGCTAGACGGGAAAAGGA 59.997 52.381 0.00 0.00 0.00 3.36
5701 5948 1.003233 AGTTGGCTAGACGGGAAAAGG 59.997 52.381 0.00 0.00 0.00 3.11
5702 5949 2.474410 AGTTGGCTAGACGGGAAAAG 57.526 50.000 0.00 0.00 0.00 2.27
5703 5950 2.158726 ACAAGTTGGCTAGACGGGAAAA 60.159 45.455 7.96 0.00 0.00 2.29
5704 5951 1.418637 ACAAGTTGGCTAGACGGGAAA 59.581 47.619 7.96 0.00 0.00 3.13
5705 5952 1.001633 GACAAGTTGGCTAGACGGGAA 59.998 52.381 7.96 0.00 0.00 3.97
5706 5953 0.606604 GACAAGTTGGCTAGACGGGA 59.393 55.000 7.96 0.00 0.00 5.14
5707 5954 0.608640 AGACAAGTTGGCTAGACGGG 59.391 55.000 10.28 0.00 30.85 5.28
5708 5955 2.069273 CAAGACAAGTTGGCTAGACGG 58.931 52.381 12.78 0.00 31.94 4.79
5709 5956 2.069273 CCAAGACAAGTTGGCTAGACG 58.931 52.381 12.78 1.00 31.94 4.18
5710 5957 3.402628 TCCAAGACAAGTTGGCTAGAC 57.597 47.619 12.78 0.00 45.89 2.59
5711 5958 4.134563 GTTTCCAAGACAAGTTGGCTAGA 58.865 43.478 12.78 9.50 45.89 2.43
5712 5959 3.882888 TGTTTCCAAGACAAGTTGGCTAG 59.117 43.478 12.78 7.01 45.89 3.42
5713 5960 3.892284 TGTTTCCAAGACAAGTTGGCTA 58.108 40.909 12.78 0.00 45.89 3.93
5714 5961 2.733956 TGTTTCCAAGACAAGTTGGCT 58.266 42.857 5.04 5.04 45.89 4.75
5715 5962 3.181476 ACATGTTTCCAAGACAAGTTGGC 60.181 43.478 7.96 3.64 45.89 4.52
5716 5963 4.805192 CAACATGTTTCCAAGACAAGTTGG 59.195 41.667 8.77 0.00 45.55 3.77
5717 5964 5.954434 CAACATGTTTCCAAGACAAGTTG 57.046 39.130 8.77 9.84 44.72 3.16
5718 5965 5.913137 TCAACATGTTTCCAAGACAAGTT 57.087 34.783 8.77 0.00 38.88 2.66
5719 5966 6.322201 AGAATCAACATGTTTCCAAGACAAGT 59.678 34.615 8.77 0.00 31.02 3.16
5720 5967 6.639686 CAGAATCAACATGTTTCCAAGACAAG 59.360 38.462 8.77 0.00 28.84 3.16
5721 5968 6.320926 TCAGAATCAACATGTTTCCAAGACAA 59.679 34.615 8.77 0.00 28.84 3.18
5722 5969 5.827267 TCAGAATCAACATGTTTCCAAGACA 59.173 36.000 8.77 0.00 28.84 3.41
5723 5970 6.317789 TCAGAATCAACATGTTTCCAAGAC 57.682 37.500 8.77 0.00 28.84 3.01
5724 5971 6.957920 TTCAGAATCAACATGTTTCCAAGA 57.042 33.333 8.77 3.00 28.84 3.02
5725 5972 8.492748 CAATTTCAGAATCAACATGTTTCCAAG 58.507 33.333 8.77 0.00 28.84 3.61
5726 5973 8.202811 TCAATTTCAGAATCAACATGTTTCCAA 58.797 29.630 8.77 0.00 28.84 3.53
5727 5974 7.724287 TCAATTTCAGAATCAACATGTTTCCA 58.276 30.769 8.77 0.00 28.84 3.53
5728 5975 7.869429 ACTCAATTTCAGAATCAACATGTTTCC 59.131 33.333 8.77 0.00 28.84 3.13
5729 5976 8.807667 ACTCAATTTCAGAATCAACATGTTTC 57.192 30.769 8.77 4.40 0.00 2.78
5730 5977 9.603921 AAACTCAATTTCAGAATCAACATGTTT 57.396 25.926 8.77 0.00 0.00 2.83
5814 6061 0.103390 TATGGTGCGGGACATGTACG 59.897 55.000 15.75 15.75 0.00 3.67
5875 6122 4.407365 CCCCAGTTCTGTTTAATGGAGTT 58.593 43.478 0.00 0.00 32.55 3.01
5946 6193 6.263344 CACAAATGAAGCTATGATGTCAAGG 58.737 40.000 0.00 0.00 0.00 3.61
5976 6223 0.165295 CTGCAGACACAAGACATGCG 59.835 55.000 8.42 0.00 39.74 4.73
5986 6233 4.045104 CCTCGTTGATATACTGCAGACAC 58.955 47.826 23.35 7.40 0.00 3.67
6026 6273 6.470556 CACGTAGTCAGTATTGTCTTCATCAG 59.529 42.308 0.00 0.00 41.61 2.90
6199 6446 9.691362 GTGTAATAATGGTTGTGATTGTTCTTT 57.309 29.630 0.00 0.00 0.00 2.52
6266 6513 2.032620 ACTATCCCTGCCGACTTACAG 58.967 52.381 0.00 0.00 0.00 2.74
6270 6517 0.032017 AGGACTATCCCTGCCGACTT 60.032 55.000 0.00 0.00 37.19 3.01
6285 6532 4.725790 AAAAGCCATCTGCAATAAGGAC 57.274 40.909 0.00 0.00 44.83 3.85
6326 6573 7.703621 GTGGTTTTAGTTCAAAGAAAGGGTAAC 59.296 37.037 0.00 0.00 0.00 2.50
6332 6579 5.675444 CGTCGTGGTTTTAGTTCAAAGAAAG 59.325 40.000 0.00 0.00 0.00 2.62
6338 6585 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
6340 6587 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
6341 6588 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
6344 6591 5.055812 ACCAAATTACTCGTCGTGGTTTTA 58.944 37.500 0.00 0.00 35.89 1.52
6345 6592 3.878699 ACCAAATTACTCGTCGTGGTTTT 59.121 39.130 0.00 0.00 35.89 2.43
6346 6593 3.469739 ACCAAATTACTCGTCGTGGTTT 58.530 40.909 0.00 0.00 35.89 3.27
6347 6594 3.116079 ACCAAATTACTCGTCGTGGTT 57.884 42.857 0.00 0.00 35.89 3.67
6349 6596 3.577667 TGTACCAAATTACTCGTCGTGG 58.422 45.455 0.00 0.00 0.00 4.94
6350 6597 4.478699 TCTGTACCAAATTACTCGTCGTG 58.521 43.478 0.00 0.00 0.00 4.35
6352 6599 4.103357 CCTCTGTACCAAATTACTCGTCG 58.897 47.826 0.00 0.00 0.00 5.12
6353 6600 4.159135 TCCCTCTGTACCAAATTACTCGTC 59.841 45.833 0.00 0.00 0.00 4.20
6355 6602 4.159879 ACTCCCTCTGTACCAAATTACTCG 59.840 45.833 0.00 0.00 0.00 4.18
6356 6603 5.678955 ACTCCCTCTGTACCAAATTACTC 57.321 43.478 0.00 0.00 0.00 2.59
6358 6605 6.786967 TCTACTCCCTCTGTACCAAATTAC 57.213 41.667 0.00 0.00 0.00 1.89
6359 6606 7.236019 TGTTTCTACTCCCTCTGTACCAAATTA 59.764 37.037 0.00 0.00 0.00 1.40
6361 6608 5.546499 TGTTTCTACTCCCTCTGTACCAAAT 59.454 40.000 0.00 0.00 0.00 2.32
6362 6609 4.903049 TGTTTCTACTCCCTCTGTACCAAA 59.097 41.667 0.00 0.00 0.00 3.28
6363 6610 4.485875 TGTTTCTACTCCCTCTGTACCAA 58.514 43.478 0.00 0.00 0.00 3.67
6365 6612 4.710375 TGATGTTTCTACTCCCTCTGTACC 59.290 45.833 0.00 0.00 0.00 3.34
6366 6613 5.916661 TGATGTTTCTACTCCCTCTGTAC 57.083 43.478 0.00 0.00 0.00 2.90
6367 6614 9.877222 TTATATGATGTTTCTACTCCCTCTGTA 57.123 33.333 0.00 0.00 0.00 2.74
6371 6618 8.643324 ACTGTTATATGATGTTTCTACTCCCTC 58.357 37.037 0.00 0.00 0.00 4.30
6372 6619 8.554490 ACTGTTATATGATGTTTCTACTCCCT 57.446 34.615 0.00 0.00 0.00 4.20
6406 6653 9.056005 TCCTCTTGCATGTTTAATATATGACAC 57.944 33.333 0.00 0.00 0.00 3.67
6473 6720 5.431420 AATATTGTTCGTGTCACTTTGCA 57.569 34.783 0.65 0.00 0.00 4.08
6527 6774 8.084684 GCCTAGAATTTCATTTCTTGAACTTGT 58.915 33.333 0.00 0.00 43.99 3.16
6594 6841 7.584122 AGACGAGAGGAATACATAAAGCTTA 57.416 36.000 0.00 0.00 0.00 3.09
6602 6849 5.197451 ACAGAGAAGACGAGAGGAATACAT 58.803 41.667 0.00 0.00 0.00 2.29
6606 6853 3.367910 GCAACAGAGAAGACGAGAGGAAT 60.368 47.826 0.00 0.00 0.00 3.01
6628 6875 2.416244 ATAGTACATCCGGCGTGGCG 62.416 60.000 6.01 9.03 37.80 5.69
6634 6881 3.997021 CAGATGGAAATAGTACATCCGGC 59.003 47.826 0.00 0.00 41.38 6.13
6658 6905 3.118665 TCATCGAGTGAATGATGAAGCCA 60.119 43.478 2.62 0.00 45.81 4.75
6714 6968 6.127083 ACAAGGTGATGGTGAAAACTTTTCAT 60.127 34.615 17.84 4.70 0.00 2.57
6728 6982 5.586243 CCACACTATTTCTACAAGGTGATGG 59.414 44.000 0.00 0.00 0.00 3.51
6746 7000 1.599606 CGACAGAGCCTAGCCACACT 61.600 60.000 0.00 0.00 0.00 3.55
6766 7020 3.935203 CGATTTACAAGGCTGATGTCAGT 59.065 43.478 11.35 0.00 45.45 3.41
6767 7021 3.310774 CCGATTTACAAGGCTGATGTCAG 59.689 47.826 5.66 5.66 46.40 3.51
6769 7023 2.032178 GCCGATTTACAAGGCTGATGTC 59.968 50.000 0.00 0.00 46.83 3.06
6770 7024 2.017049 GCCGATTTACAAGGCTGATGT 58.983 47.619 0.00 0.00 46.83 3.06
6771 7025 2.763249 GCCGATTTACAAGGCTGATG 57.237 50.000 0.00 0.00 46.83 3.07
6795 7073 4.322804 CACACAGATACGAACGGAACTAAC 59.677 45.833 0.00 0.00 0.00 2.34
6800 7078 3.054166 CAACACACAGATACGAACGGAA 58.946 45.455 0.00 0.00 0.00 4.30
6829 7107 2.255554 GTGTCAGCAGCGAGACGA 59.744 61.111 14.00 3.83 37.58 4.20
6830 7108 2.807045 GGTGTCAGCAGCGAGACG 60.807 66.667 14.00 0.00 37.58 4.18
6832 7110 2.340078 GTGGTGTCAGCAGCGAGA 59.660 61.111 4.63 0.00 45.36 4.04
6833 7111 2.025969 CTGTGGTGTCAGCAGCGAG 61.026 63.158 4.63 0.00 45.36 5.03
6835 7113 3.046087 CCTGTGGTGTCAGCAGCG 61.046 66.667 4.63 0.00 45.36 5.18
6836 7114 2.111878 ACCTGTGGTGTCAGCAGC 59.888 61.111 4.63 1.60 42.95 5.25
6845 7123 3.117512 AGAAGGAAAATGACACCTGTGGT 60.118 43.478 1.91 0.00 35.62 4.16
6846 7124 3.490348 AGAAGGAAAATGACACCTGTGG 58.510 45.455 1.91 0.00 34.03 4.17
6847 7125 4.261741 CCAAGAAGGAAAATGACACCTGTG 60.262 45.833 0.00 0.00 41.22 3.66
6848 7126 3.891366 CCAAGAAGGAAAATGACACCTGT 59.109 43.478 0.00 0.00 41.22 4.00
6850 7128 4.453480 TCCAAGAAGGAAAATGACACCT 57.547 40.909 0.00 0.00 45.65 4.00
6865 7155 1.153107 CCATGATGCGCCTCCAAGA 60.153 57.895 4.18 0.00 0.00 3.02
6866 7156 2.842256 GCCATGATGCGCCTCCAAG 61.842 63.158 4.18 0.00 0.00 3.61
6868 7158 4.881440 GGCCATGATGCGCCTCCA 62.881 66.667 14.98 0.00 42.21 3.86
6873 7163 2.976903 GAGGAGGCCATGATGCGC 60.977 66.667 5.01 0.00 0.00 6.09
6874 7164 2.281345 GGAGGAGGCCATGATGCG 60.281 66.667 5.01 0.00 0.00 4.73
6875 7165 2.114838 GGGAGGAGGCCATGATGC 59.885 66.667 5.01 0.00 0.00 3.91
6876 7166 2.429058 CGGGAGGAGGCCATGATG 59.571 66.667 5.01 0.00 0.00 3.07
6877 7167 3.564218 GCGGGAGGAGGCCATGAT 61.564 66.667 5.01 0.00 0.00 2.45
6902 7192 3.245441 AGGTTTCCCCTAAACTCGAAGA 58.755 45.455 0.00 0.00 45.70 2.87
6943 7233 1.153647 GTGATGCCGTCGTCATCCA 60.154 57.895 13.25 0.00 40.09 3.41
6949 7239 3.296709 GACCCTGTGATGCCGTCGT 62.297 63.158 0.00 0.00 0.00 4.34
6951 7241 0.392998 AATGACCCTGTGATGCCGTC 60.393 55.000 0.00 0.00 0.00 4.79
6953 7243 1.133025 GAAAATGACCCTGTGATGCCG 59.867 52.381 0.00 0.00 0.00 5.69
6988 7278 1.807981 CCGCGAGCGACCAATACAA 60.808 57.895 19.72 0.00 42.83 2.41
6990 7280 0.318445 ATACCGCGAGCGACCAATAC 60.318 55.000 19.72 0.00 42.83 1.89
6992 7282 1.299926 GATACCGCGAGCGACCAAT 60.300 57.895 19.72 6.32 42.83 3.16
7013 7303 2.035626 ACCATCGCCAAACCCCTG 59.964 61.111 0.00 0.00 0.00 4.45
7016 7306 3.068064 CCCACCATCGCCAAACCC 61.068 66.667 0.00 0.00 0.00 4.11
7018 7308 2.212900 GAAGCCCACCATCGCCAAAC 62.213 60.000 0.00 0.00 0.00 2.93
7031 7326 2.943653 CGAACCAACACGAAGCCC 59.056 61.111 0.00 0.00 0.00 5.19
7033 7328 0.657368 CAAGCGAACCAACACGAAGC 60.657 55.000 0.00 0.00 0.00 3.86
7038 7333 2.335011 GGGCAAGCGAACCAACAC 59.665 61.111 0.00 0.00 0.00 3.32
7047 7342 0.740737 CCAATTTAGAGGGGCAAGCG 59.259 55.000 0.00 0.00 0.00 4.68
7054 7350 3.055891 CACAAAAGCCCCAATTTAGAGGG 60.056 47.826 0.00 0.00 45.04 4.30
7063 7359 2.158885 GCTAAAACCACAAAAGCCCCAA 60.159 45.455 0.00 0.00 0.00 4.12
7107 7403 2.169769 CTCGAGGTTTGGCCAGGTATAA 59.830 50.000 5.11 0.00 40.61 0.98
7108 7404 1.760613 CTCGAGGTTTGGCCAGGTATA 59.239 52.381 5.11 0.00 40.61 1.47
7109 7405 0.541863 CTCGAGGTTTGGCCAGGTAT 59.458 55.000 5.11 0.00 40.61 2.73
7110 7406 1.980052 CTCGAGGTTTGGCCAGGTA 59.020 57.895 5.11 0.00 40.61 3.08
7111 7407 2.750350 CTCGAGGTTTGGCCAGGT 59.250 61.111 5.11 0.00 40.61 4.00
7112 7408 2.747855 GCTCGAGGTTTGGCCAGG 60.748 66.667 15.58 0.00 40.61 4.45
7113 7409 2.747855 GGCTCGAGGTTTGGCCAG 60.748 66.667 15.58 0.00 43.59 4.85
7114 7410 4.697756 CGGCTCGAGGTTTGGCCA 62.698 66.667 15.58 0.00 44.27 5.36
7120 7416 4.772231 TAGGCCCGGCTCGAGGTT 62.772 66.667 15.58 0.00 0.00 3.50
7133 7429 1.815840 GCTTCGGACTTGGCTAGGC 60.816 63.158 9.85 9.85 0.00 3.93
7134 7430 0.036388 TTGCTTCGGACTTGGCTAGG 60.036 55.000 0.20 0.00 0.00 3.02
7135 7431 1.808411 TTTGCTTCGGACTTGGCTAG 58.192 50.000 0.00 0.00 0.00 3.42
7136 7432 2.264005 TTTTGCTTCGGACTTGGCTA 57.736 45.000 0.00 0.00 0.00 3.93
7137 7433 1.398692 TTTTTGCTTCGGACTTGGCT 58.601 45.000 0.00 0.00 0.00 4.75
7138 7434 3.957383 TTTTTGCTTCGGACTTGGC 57.043 47.368 0.00 0.00 0.00 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.