Multiple sequence alignment - TraesCS2A01G193500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G193500 chr2A 100.000 2237 0 0 1 2237 161921796 161924032 0.000000e+00 4132.0
1 TraesCS2A01G193500 chr2A 86.391 169 18 3 789 955 313543056 313543221 1.770000e-41 180.0
2 TraesCS2A01G193500 chr5A 96.434 701 17 2 1 693 635406760 635407460 0.000000e+00 1149.0
3 TraesCS2A01G193500 chr5A 79.809 629 91 24 1500 2116 242746939 242747543 2.050000e-115 425.0
4 TraesCS2A01G193500 chr5A 89.130 138 12 3 825 960 121457294 121457430 3.820000e-38 169.0
5 TraesCS2A01G193500 chr5A 88.971 136 14 1 826 960 121465386 121465521 1.370000e-37 167.0
6 TraesCS2A01G193500 chr7A 95.000 700 26 4 1 693 239201625 239200928 0.000000e+00 1090.0
7 TraesCS2A01G193500 chr7A 85.476 420 50 9 1707 2119 534659321 534658906 5.710000e-116 427.0
8 TraesCS2A01G193500 chr7A 95.420 131 4 2 2107 2237 523720460 523720588 8.100000e-50 207.0
9 TraesCS2A01G193500 chr7A 85.556 180 21 3 789 966 520573388 520573212 1.360000e-42 183.0
10 TraesCS2A01G193500 chr1D 94.253 696 32 3 4 693 394339151 394338458 0.000000e+00 1057.0
11 TraesCS2A01G193500 chr1D 79.752 805 105 36 1329 2116 408897708 408898471 4.230000e-147 531.0
12 TraesCS2A01G193500 chr1D 80.763 655 88 21 1339 1985 82117110 82116486 5.590000e-131 477.0
13 TraesCS2A01G193500 chr1D 79.669 605 81 24 1329 1918 368964950 368965527 4.480000e-107 398.0
14 TraesCS2A01G193500 chr1D 97.521 121 3 0 2117 2237 272255742 272255862 8.100000e-50 207.0
15 TraesCS2A01G193500 chr3A 93.759 705 36 3 1 699 244425808 244425106 0.000000e+00 1051.0
16 TraesCS2A01G193500 chr3A 89.911 337 29 4 1329 1662 270761356 270761690 1.590000e-116 429.0
17 TraesCS2A01G193500 chr3A 79.621 633 89 27 1500 2116 321906409 321907017 3.440000e-113 418.0
18 TraesCS2A01G193500 chr3A 80.524 267 35 13 1200 1450 290794259 290794524 2.930000e-44 189.0
19 TraesCS2A01G193500 chr3A 85.057 174 21 3 789 960 277661451 277661281 2.950000e-39 172.0
20 TraesCS2A01G193500 chr2B 93.983 698 33 3 4 693 116321348 116320652 0.000000e+00 1048.0
21 TraesCS2A01G193500 chr2B 91.724 145 5 5 2092 2235 750307039 750307177 6.300000e-46 195.0
22 TraesCS2A01G193500 chr5B 93.599 703 34 3 1 693 48851613 48852314 0.000000e+00 1038.0
23 TraesCS2A01G193500 chr5B 94.182 636 29 3 65 693 590251488 590252122 0.000000e+00 963.0
24 TraesCS2A01G193500 chr5B 88.955 335 33 3 767 1100 175012938 175013269 5.750000e-111 411.0
25 TraesCS2A01G193500 chr5B 93.985 133 8 0 2105 2237 65059767 65059899 3.770000e-48 202.0
26 TraesCS2A01G193500 chr1B 93.696 698 35 3 4 693 478565328 478564632 0.000000e+00 1037.0
27 TraesCS2A01G193500 chr1A 92.826 697 42 5 4 694 137075364 137074670 0.000000e+00 1003.0
28 TraesCS2A01G193500 chr1A 85.106 423 53 9 1707 2121 365750791 365750371 7.390000e-115 424.0
29 TraesCS2A01G193500 chr1A 84.652 417 54 8 1707 2116 365734762 365734349 7.440000e-110 407.0
30 TraesCS2A01G193500 chr4D 80.925 865 109 33 1275 2121 251677589 251678415 1.130000e-177 632.0
31 TraesCS2A01G193500 chr4D 78.535 792 116 33 1339 2116 267193541 267194292 2.600000e-129 472.0
32 TraesCS2A01G193500 chr4D 79.937 638 81 26 1363 1985 144663349 144662744 2.050000e-115 425.0
33 TraesCS2A01G193500 chr4D 96.694 121 4 0 2117 2237 337417240 337417120 3.770000e-48 202.0
34 TraesCS2A01G193500 chr6D 80.101 789 117 26 1339 2116 244216400 244217159 3.250000e-153 551.0
35 TraesCS2A01G193500 chr6D 79.750 800 103 39 1339 2116 93714427 93715189 1.970000e-145 525.0
36 TraesCS2A01G193500 chr6D 79.625 800 98 45 1339 2112 106419413 106418653 4.260000e-142 514.0
37 TraesCS2A01G193500 chr6D 79.383 810 99 43 1339 2121 176602008 176601240 1.980000e-140 508.0
38 TraesCS2A01G193500 chr6D 79.000 800 110 38 1339 2116 176594537 176593774 5.550000e-136 494.0
39 TraesCS2A01G193500 chr3D 79.705 813 108 39 1339 2131 166565306 166564531 3.270000e-148 534.0
40 TraesCS2A01G193500 chr3D 81.548 672 73 32 1339 1988 168757888 168757246 7.130000e-140 507.0
41 TraesCS2A01G193500 chr3D 91.304 207 16 2 767 971 356759717 356759923 4.700000e-72 281.0
42 TraesCS2A01G193500 chr3D 89.372 207 20 2 767 971 356726380 356726586 2.200000e-65 259.0
43 TraesCS2A01G193500 chr3D 97.521 121 3 0 2117 2237 431883878 431883998 8.100000e-50 207.0
44 TraesCS2A01G193500 chr3D 84.211 76 8 4 1275 1346 461836316 461836391 1.110000e-08 71.3
45 TraesCS2A01G193500 chr3D 91.837 49 3 1 1299 1346 461828671 461828719 1.430000e-07 67.6
46 TraesCS2A01G193500 chr5D 79.747 790 116 29 1339 2115 138220559 138219801 1.180000e-147 532.0
47 TraesCS2A01G193500 chr5D 79.620 790 119 28 1339 2116 138212594 138211835 1.520000e-146 529.0
48 TraesCS2A01G193500 chr5D 79.198 798 111 38 1339 2116 208157078 208156316 9.220000e-139 503.0
49 TraesCS2A01G193500 chr7D 79.850 799 104 39 1339 2116 114843992 114843230 4.230000e-147 531.0
50 TraesCS2A01G193500 chr7D 79.280 806 107 43 1339 2121 493857966 493857198 1.980000e-140 508.0
51 TraesCS2A01G193500 chr7D 98.347 121 2 0 2117 2237 617483924 617484044 1.740000e-51 213.0
52 TraesCS2A01G193500 chr2D 79.723 794 111 35 1339 2116 541996456 541995697 1.520000e-146 529.0
53 TraesCS2A01G193500 chr2D 79.474 799 107 38 1341 2116 450420679 450419915 4.260000e-142 514.0
54 TraesCS2A01G193500 chr2D 79.130 805 108 43 1333 2116 347591905 347592670 3.320000e-138 501.0
55 TraesCS2A01G193500 chr6A 81.126 604 72 27 1525 2117 259788718 259788146 1.580000e-121 446.0
56 TraesCS2A01G193500 chr6A 84.706 425 53 9 1707 2121 168702629 168702207 4.440000e-112 414.0
57 TraesCS2A01G193500 chr6A 93.525 139 9 0 2099 2237 454182348 454182486 8.100000e-50 207.0
58 TraesCS2A01G193500 chr6A 93.333 135 8 1 2104 2237 220806617 220806483 4.870000e-47 198.0
59 TraesCS2A01G193500 chr4B 86.058 416 47 11 1707 2116 446182018 446182428 9.490000e-119 436.0
60 TraesCS2A01G193500 chr4A 80.095 633 86 26 1500 2116 451895831 451896439 3.410000e-118 435.0
61 TraesCS2A01G193500 chr4A 87.195 164 20 1 1092 1254 169247798 169247635 3.790000e-43 185.0
62 TraesCS2A01G193500 chr4A 86.806 144 16 3 825 966 395686367 395686225 8.270000e-35 158.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G193500 chr2A 161921796 161924032 2236 False 4132 4132 100.000 1 2237 1 chr2A.!!$F1 2236
1 TraesCS2A01G193500 chr5A 635406760 635407460 700 False 1149 1149 96.434 1 693 1 chr5A.!!$F4 692
2 TraesCS2A01G193500 chr5A 242746939 242747543 604 False 425 425 79.809 1500 2116 1 chr5A.!!$F3 616
3 TraesCS2A01G193500 chr7A 239200928 239201625 697 True 1090 1090 95.000 1 693 1 chr7A.!!$R1 692
4 TraesCS2A01G193500 chr1D 394338458 394339151 693 True 1057 1057 94.253 4 693 1 chr1D.!!$R2 689
5 TraesCS2A01G193500 chr1D 408897708 408898471 763 False 531 531 79.752 1329 2116 1 chr1D.!!$F3 787
6 TraesCS2A01G193500 chr1D 82116486 82117110 624 True 477 477 80.763 1339 1985 1 chr1D.!!$R1 646
7 TraesCS2A01G193500 chr1D 368964950 368965527 577 False 398 398 79.669 1329 1918 1 chr1D.!!$F2 589
8 TraesCS2A01G193500 chr3A 244425106 244425808 702 True 1051 1051 93.759 1 699 1 chr3A.!!$R1 698
9 TraesCS2A01G193500 chr3A 321906409 321907017 608 False 418 418 79.621 1500 2116 1 chr3A.!!$F3 616
10 TraesCS2A01G193500 chr2B 116320652 116321348 696 True 1048 1048 93.983 4 693 1 chr2B.!!$R1 689
11 TraesCS2A01G193500 chr5B 48851613 48852314 701 False 1038 1038 93.599 1 693 1 chr5B.!!$F1 692
12 TraesCS2A01G193500 chr5B 590251488 590252122 634 False 963 963 94.182 65 693 1 chr5B.!!$F4 628
13 TraesCS2A01G193500 chr1B 478564632 478565328 696 True 1037 1037 93.696 4 693 1 chr1B.!!$R1 689
14 TraesCS2A01G193500 chr1A 137074670 137075364 694 True 1003 1003 92.826 4 694 1 chr1A.!!$R1 690
15 TraesCS2A01G193500 chr4D 251677589 251678415 826 False 632 632 80.925 1275 2121 1 chr4D.!!$F1 846
16 TraesCS2A01G193500 chr4D 267193541 267194292 751 False 472 472 78.535 1339 2116 1 chr4D.!!$F2 777
17 TraesCS2A01G193500 chr4D 144662744 144663349 605 True 425 425 79.937 1363 1985 1 chr4D.!!$R1 622
18 TraesCS2A01G193500 chr6D 244216400 244217159 759 False 551 551 80.101 1339 2116 1 chr6D.!!$F2 777
19 TraesCS2A01G193500 chr6D 93714427 93715189 762 False 525 525 79.750 1339 2116 1 chr6D.!!$F1 777
20 TraesCS2A01G193500 chr6D 106418653 106419413 760 True 514 514 79.625 1339 2112 1 chr6D.!!$R1 773
21 TraesCS2A01G193500 chr6D 176601240 176602008 768 True 508 508 79.383 1339 2121 1 chr6D.!!$R3 782
22 TraesCS2A01G193500 chr6D 176593774 176594537 763 True 494 494 79.000 1339 2116 1 chr6D.!!$R2 777
23 TraesCS2A01G193500 chr3D 166564531 166565306 775 True 534 534 79.705 1339 2131 1 chr3D.!!$R1 792
24 TraesCS2A01G193500 chr3D 168757246 168757888 642 True 507 507 81.548 1339 1988 1 chr3D.!!$R2 649
25 TraesCS2A01G193500 chr5D 138219801 138220559 758 True 532 532 79.747 1339 2115 1 chr5D.!!$R2 776
26 TraesCS2A01G193500 chr5D 138211835 138212594 759 True 529 529 79.620 1339 2116 1 chr5D.!!$R1 777
27 TraesCS2A01G193500 chr5D 208156316 208157078 762 True 503 503 79.198 1339 2116 1 chr5D.!!$R3 777
28 TraesCS2A01G193500 chr7D 114843230 114843992 762 True 531 531 79.850 1339 2116 1 chr7D.!!$R1 777
29 TraesCS2A01G193500 chr7D 493857198 493857966 768 True 508 508 79.280 1339 2121 1 chr7D.!!$R2 782
30 TraesCS2A01G193500 chr2D 541995697 541996456 759 True 529 529 79.723 1339 2116 1 chr2D.!!$R2 777
31 TraesCS2A01G193500 chr2D 450419915 450420679 764 True 514 514 79.474 1341 2116 1 chr2D.!!$R1 775
32 TraesCS2A01G193500 chr2D 347591905 347592670 765 False 501 501 79.130 1333 2116 1 chr2D.!!$F1 783
33 TraesCS2A01G193500 chr6A 259788146 259788718 572 True 446 446 81.126 1525 2117 1 chr6A.!!$R3 592
34 TraesCS2A01G193500 chr4A 451895831 451896439 608 False 435 435 80.095 1500 2116 1 chr4A.!!$F1 616

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
732 751 0.108138 AAGGCCTCGATTCGAAGGTG 60.108 55.0 5.23 6.33 34.74 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1577 1621 0.777446 AAGAGTAGCCCCCTTGCAAA 59.223 50.0 0.0 0.0 0.0 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 74 5.184479 ACAGCAGCATATTGAAAACACTCAT 59.816 36.000 0.00 0.00 0.00 2.90
470 483 3.653539 TGCAAGTTTACTGCTACTCGA 57.346 42.857 0.00 0.00 0.00 4.04
523 536 6.097696 TGACCTACCGATGATCTAATTTGTGA 59.902 38.462 0.00 0.00 0.00 3.58
665 684 4.594123 ATGGTTTTAAACGGGTCTTTGG 57.406 40.909 1.52 0.00 0.00 3.28
695 714 3.489398 GGCGTAACTGGTCATCTAGTGAG 60.489 52.174 0.00 0.00 37.56 3.51
730 749 2.979130 GAAGGCCTCGATTCGAAGG 58.021 57.895 5.23 13.66 34.74 3.46
731 750 0.175989 GAAGGCCTCGATTCGAAGGT 59.824 55.000 5.23 6.29 34.74 3.50
732 751 0.108138 AAGGCCTCGATTCGAAGGTG 60.108 55.000 5.23 6.33 34.74 4.00
733 752 1.521681 GGCCTCGATTCGAAGGTGG 60.522 63.158 19.05 14.04 34.74 4.61
734 753 1.521681 GCCTCGATTCGAAGGTGGG 60.522 63.158 19.05 13.75 34.74 4.61
735 754 1.144057 CCTCGATTCGAAGGTGGGG 59.856 63.158 10.38 0.99 34.74 4.96
736 755 1.614241 CCTCGATTCGAAGGTGGGGT 61.614 60.000 10.38 0.00 34.74 4.95
737 756 0.179108 CTCGATTCGAAGGTGGGGTC 60.179 60.000 10.38 0.00 34.74 4.46
738 757 1.153429 CGATTCGAAGGTGGGGTCC 60.153 63.158 3.35 0.00 0.00 4.46
739 758 1.153429 GATTCGAAGGTGGGGTCCG 60.153 63.158 3.35 0.00 0.00 4.79
740 759 1.610554 GATTCGAAGGTGGGGTCCGA 61.611 60.000 3.35 0.00 0.00 4.55
741 760 1.614241 ATTCGAAGGTGGGGTCCGAG 61.614 60.000 3.35 0.00 0.00 4.63
742 761 4.452733 CGAAGGTGGGGTCCGAGC 62.453 72.222 0.00 0.00 0.00 5.03
743 762 3.003763 GAAGGTGGGGTCCGAGCT 61.004 66.667 0.00 0.00 0.00 4.09
744 763 3.316573 GAAGGTGGGGTCCGAGCTG 62.317 68.421 4.57 0.00 0.00 4.24
752 771 3.075005 GTCCGAGCTGGGGCACTA 61.075 66.667 15.29 0.00 41.70 2.74
753 772 3.075005 TCCGAGCTGGGGCACTAC 61.075 66.667 15.52 0.00 41.70 2.73
754 773 3.390521 CCGAGCTGGGGCACTACA 61.391 66.667 6.92 0.00 41.70 2.74
755 774 2.185350 CGAGCTGGGGCACTACAG 59.815 66.667 0.00 0.00 41.70 2.74
759 778 4.308526 CTGGGGCACTACAGCAAG 57.691 61.111 0.00 0.00 35.83 4.01
760 779 1.377725 CTGGGGCACTACAGCAAGG 60.378 63.158 0.00 0.00 35.83 3.61
761 780 2.751837 GGGGCACTACAGCAAGGC 60.752 66.667 0.00 0.00 35.83 4.35
762 781 3.127533 GGGCACTACAGCAAGGCG 61.128 66.667 0.00 0.00 35.83 5.52
763 782 3.127533 GGCACTACAGCAAGGCGG 61.128 66.667 0.00 0.00 35.83 6.13
764 783 3.804193 GCACTACAGCAAGGCGGC 61.804 66.667 0.00 0.00 0.00 6.53
765 784 3.490759 CACTACAGCAAGGCGGCG 61.491 66.667 0.51 0.51 39.27 6.46
780 799 4.615815 GCGCTCGGCCATCTGGAT 62.616 66.667 2.24 0.00 37.39 3.41
781 800 2.664185 CGCTCGGCCATCTGGATG 60.664 66.667 2.24 3.79 37.39 3.51
782 801 2.824546 GCTCGGCCATCTGGATGA 59.175 61.111 2.24 0.00 41.20 2.92
783 802 1.596477 GCTCGGCCATCTGGATGAC 60.596 63.158 2.24 0.45 41.20 3.06
784 803 1.825341 CTCGGCCATCTGGATGACA 59.175 57.895 2.24 0.00 41.20 3.58
785 804 0.531532 CTCGGCCATCTGGATGACAC 60.532 60.000 2.24 1.95 41.20 3.67
786 805 1.884464 CGGCCATCTGGATGACACG 60.884 63.158 2.24 8.92 41.20 4.49
787 806 2.182842 GGCCATCTGGATGACACGC 61.183 63.158 11.66 6.58 41.20 5.34
788 807 2.528743 GCCATCTGGATGACACGCG 61.529 63.158 3.53 3.53 41.20 6.01
789 808 1.141665 CCATCTGGATGACACGCGA 59.858 57.895 15.93 0.00 41.20 5.87
790 809 0.873312 CCATCTGGATGACACGCGAG 60.873 60.000 15.93 7.88 41.20 5.03
791 810 0.873312 CATCTGGATGACACGCGAGG 60.873 60.000 15.93 7.12 41.20 4.63
792 811 1.323271 ATCTGGATGACACGCGAGGT 61.323 55.000 15.93 11.08 0.00 3.85
823 842 2.509916 CTGGAGCAGGGGCATCTC 59.490 66.667 0.00 0.00 44.61 2.75
824 843 3.092511 TGGAGCAGGGGCATCTCC 61.093 66.667 0.00 0.00 45.02 3.71
825 844 2.771762 GGAGCAGGGGCATCTCCT 60.772 66.667 0.00 0.00 44.61 3.69
826 845 2.817056 GGAGCAGGGGCATCTCCTC 61.817 68.421 0.00 0.00 44.61 3.71
827 846 3.160047 AGCAGGGGCATCTCCTCG 61.160 66.667 0.00 0.00 41.53 4.63
828 847 3.157252 GCAGGGGCATCTCCTCGA 61.157 66.667 0.00 0.00 41.53 4.04
829 848 2.818132 CAGGGGCATCTCCTCGAC 59.182 66.667 0.00 0.00 41.53 4.20
830 849 2.835431 AGGGGCATCTCCTCGACG 60.835 66.667 0.00 0.00 41.53 5.12
831 850 4.593864 GGGGCATCTCCTCGACGC 62.594 72.222 0.00 0.00 34.39 5.19
832 851 4.593864 GGGCATCTCCTCGACGCC 62.594 72.222 0.00 0.00 42.21 5.68
833 852 4.933064 GGCATCTCCTCGACGCCG 62.933 72.222 0.00 0.00 32.14 6.46
834 853 4.933064 GCATCTCCTCGACGCCGG 62.933 72.222 0.00 0.00 36.24 6.13
835 854 4.933064 CATCTCCTCGACGCCGGC 62.933 72.222 19.07 19.07 36.24 6.13
855 874 2.960659 CTCGATGCAGAGCAGGCG 60.961 66.667 9.72 9.72 43.65 5.52
856 875 3.421687 CTCGATGCAGAGCAGGCGA 62.422 63.158 15.43 15.43 43.65 5.54
857 876 2.510012 CGATGCAGAGCAGGCGAA 60.510 61.111 10.26 0.00 43.65 4.70
858 877 2.523507 CGATGCAGAGCAGGCGAAG 61.524 63.158 10.26 0.00 43.65 3.79
860 879 4.318949 TGCAGAGCAGGCGAAGCA 62.319 61.111 4.04 4.04 46.70 3.91
871 890 4.327885 CGAAGCAGGGTCGCTATC 57.672 61.111 0.00 0.00 42.89 2.08
872 891 1.658717 CGAAGCAGGGTCGCTATCG 60.659 63.158 5.10 5.10 42.89 2.92
873 892 1.437986 GAAGCAGGGTCGCTATCGT 59.562 57.895 0.00 0.00 42.89 3.73
874 893 0.595310 GAAGCAGGGTCGCTATCGTC 60.595 60.000 0.00 0.00 42.89 4.20
875 894 2.337749 AAGCAGGGTCGCTATCGTCG 62.338 60.000 0.00 0.00 42.89 5.12
876 895 2.831366 GCAGGGTCGCTATCGTCGA 61.831 63.158 0.00 0.00 36.96 4.20
877 896 1.280142 CAGGGTCGCTATCGTCGAG 59.720 63.158 0.00 0.00 36.56 4.04
880 899 4.197522 GTCGCTATCGTCGAGCAG 57.802 61.111 0.00 1.64 40.09 4.24
881 900 2.006587 GTCGCTATCGTCGAGCAGC 61.007 63.158 17.45 17.45 40.09 5.25
882 901 2.180862 TCGCTATCGTCGAGCAGCT 61.181 57.895 22.18 0.00 40.09 4.24
883 902 2.008168 CGCTATCGTCGAGCAGCTG 61.008 63.158 22.18 10.11 40.09 4.24
884 903 2.299347 GCTATCGTCGAGCAGCTGC 61.299 63.158 31.53 31.53 39.84 5.25
898 917 3.264947 CTGCTGACAGCCAAGCAG 58.735 61.111 24.33 11.78 46.69 4.24
900 919 4.099170 GCTGACAGCCAAGCAGCG 62.099 66.667 17.01 0.00 44.52 5.18
901 920 2.357881 CTGACAGCCAAGCAGCGA 60.358 61.111 0.00 0.00 38.01 4.93
902 921 2.666190 TGACAGCCAAGCAGCGAC 60.666 61.111 0.00 0.00 38.01 5.19
903 922 2.666190 GACAGCCAAGCAGCGACA 60.666 61.111 0.00 0.00 38.01 4.35
904 923 2.033141 ACAGCCAAGCAGCGACAT 59.967 55.556 0.00 0.00 38.01 3.06
905 924 2.249557 GACAGCCAAGCAGCGACATG 62.250 60.000 0.00 0.00 38.01 3.21
906 925 2.749044 AGCCAAGCAGCGACATGG 60.749 61.111 0.00 5.49 38.01 3.66
907 926 2.747460 GCCAAGCAGCGACATGGA 60.747 61.111 12.15 0.00 34.82 3.41
908 927 2.758089 GCCAAGCAGCGACATGGAG 61.758 63.158 12.15 0.00 34.82 3.86
909 928 2.110967 CCAAGCAGCGACATGGAGG 61.111 63.158 0.00 0.00 34.82 4.30
910 929 1.376424 CAAGCAGCGACATGGAGGT 60.376 57.895 0.00 0.00 0.00 3.85
911 930 1.376424 AAGCAGCGACATGGAGGTG 60.376 57.895 14.79 14.79 38.72 4.00
912 931 2.809861 AAGCAGCGACATGGAGGTGG 62.810 60.000 18.79 5.82 36.48 4.61
913 932 2.124983 CAGCGACATGGAGGTGGG 60.125 66.667 12.24 0.00 32.77 4.61
914 933 3.402681 AGCGACATGGAGGTGGGG 61.403 66.667 0.00 0.00 0.00 4.96
915 934 3.399181 GCGACATGGAGGTGGGGA 61.399 66.667 0.00 0.00 0.00 4.81
916 935 2.966732 GCGACATGGAGGTGGGGAA 61.967 63.158 0.00 0.00 0.00 3.97
917 936 1.221840 CGACATGGAGGTGGGGAAG 59.778 63.158 0.00 0.00 0.00 3.46
918 937 1.077429 GACATGGAGGTGGGGAAGC 60.077 63.158 0.00 0.00 0.00 3.86
919 938 1.852157 ACATGGAGGTGGGGAAGCA 60.852 57.895 0.00 0.00 0.00 3.91
920 939 1.077212 CATGGAGGTGGGGAAGCAG 60.077 63.158 0.00 0.00 0.00 4.24
921 940 2.311854 ATGGAGGTGGGGAAGCAGG 61.312 63.158 0.00 0.00 0.00 4.85
922 941 2.610859 GGAGGTGGGGAAGCAGGA 60.611 66.667 0.00 0.00 0.00 3.86
923 942 2.674220 GGAGGTGGGGAAGCAGGAG 61.674 68.421 0.00 0.00 0.00 3.69
924 943 3.334054 AGGTGGGGAAGCAGGAGC 61.334 66.667 0.00 0.00 42.56 4.70
925 944 3.650950 GGTGGGGAAGCAGGAGCA 61.651 66.667 0.00 0.00 45.49 4.26
926 945 2.436109 GTGGGGAAGCAGGAGCAA 59.564 61.111 0.00 0.00 45.49 3.91
927 946 1.676967 GTGGGGAAGCAGGAGCAAG 60.677 63.158 0.00 0.00 45.49 4.01
928 947 2.044551 GGGGAAGCAGGAGCAAGG 60.045 66.667 0.00 0.00 45.49 3.61
929 948 2.753446 GGGAAGCAGGAGCAAGGC 60.753 66.667 0.00 0.00 45.49 4.35
930 949 2.034687 GGAAGCAGGAGCAAGGCA 59.965 61.111 0.00 0.00 45.49 4.75
931 950 2.045131 GGAAGCAGGAGCAAGGCAG 61.045 63.158 0.00 0.00 45.49 4.85
932 951 2.035312 AAGCAGGAGCAAGGCAGG 59.965 61.111 0.00 0.00 45.49 4.85
933 952 3.580604 AAGCAGGAGCAAGGCAGGG 62.581 63.158 0.00 0.00 45.49 4.45
934 953 4.039092 GCAGGAGCAAGGCAGGGA 62.039 66.667 0.00 0.00 41.58 4.20
935 954 2.271497 CAGGAGCAAGGCAGGGAG 59.729 66.667 0.00 0.00 0.00 4.30
936 955 3.013932 AGGAGCAAGGCAGGGAGG 61.014 66.667 0.00 0.00 0.00 4.30
937 956 4.120755 GGAGCAAGGCAGGGAGGG 62.121 72.222 0.00 0.00 0.00 4.30
938 957 4.811364 GAGCAAGGCAGGGAGGGC 62.811 72.222 0.00 0.00 0.00 5.19
941 960 4.785453 CAAGGCAGGGAGGGCGAC 62.785 72.222 0.00 0.00 38.57 5.19
956 975 2.815647 GACGGGCAAGGCGAGAAG 60.816 66.667 0.00 0.00 0.00 2.85
957 976 4.394712 ACGGGCAAGGCGAGAAGG 62.395 66.667 0.00 0.00 0.00 3.46
989 1008 2.577593 GGGAACGACGGAGAAGGG 59.422 66.667 0.00 0.00 0.00 3.95
990 1009 2.577593 GGAACGACGGAGAAGGGG 59.422 66.667 0.00 0.00 0.00 4.79
991 1010 2.577593 GAACGACGGAGAAGGGGG 59.422 66.667 0.00 0.00 0.00 5.40
992 1011 3.660732 GAACGACGGAGAAGGGGGC 62.661 68.421 0.00 0.00 0.00 5.80
1012 1031 3.878667 GGAGGATGCGGGGAAGGG 61.879 72.222 0.00 0.00 0.00 3.95
1013 1032 3.878667 GAGGATGCGGGGAAGGGG 61.879 72.222 0.00 0.00 0.00 4.79
1014 1033 4.431524 AGGATGCGGGGAAGGGGA 62.432 66.667 0.00 0.00 0.00 4.81
1015 1034 3.416880 GGATGCGGGGAAGGGGAA 61.417 66.667 0.00 0.00 0.00 3.97
1016 1035 2.124278 GATGCGGGGAAGGGGAAC 60.124 66.667 0.00 0.00 0.00 3.62
1017 1036 2.938798 ATGCGGGGAAGGGGAACA 60.939 61.111 0.00 0.00 0.00 3.18
1018 1037 2.893682 GATGCGGGGAAGGGGAACAG 62.894 65.000 0.00 0.00 0.00 3.16
1019 1038 3.327404 GCGGGGAAGGGGAACAGA 61.327 66.667 0.00 0.00 0.00 3.41
1020 1039 2.990479 CGGGGAAGGGGAACAGAG 59.010 66.667 0.00 0.00 0.00 3.35
1021 1040 2.677848 GGGGAAGGGGAACAGAGC 59.322 66.667 0.00 0.00 0.00 4.09
1022 1041 2.677848 GGGAAGGGGAACAGAGCC 59.322 66.667 0.00 0.00 0.00 4.70
1023 1042 2.269241 GGAAGGGGAACAGAGCCG 59.731 66.667 0.00 0.00 0.00 5.52
1024 1043 2.269241 GAAGGGGAACAGAGCCGG 59.731 66.667 0.00 0.00 0.00 6.13
1025 1044 2.203938 AAGGGGAACAGAGCCGGA 60.204 61.111 5.05 0.00 0.00 5.14
1026 1045 2.245438 GAAGGGGAACAGAGCCGGAG 62.245 65.000 5.05 0.00 0.00 4.63
1041 1060 4.144703 GAGGCGGGAGGGTTCGTC 62.145 72.222 0.00 0.00 0.00 4.20
1047 1066 4.452733 GGAGGGTTCGTCGGCCAG 62.453 72.222 2.24 0.00 0.00 4.85
1048 1067 3.379445 GAGGGTTCGTCGGCCAGA 61.379 66.667 2.24 0.00 0.00 3.86
1049 1068 3.358076 GAGGGTTCGTCGGCCAGAG 62.358 68.421 2.24 0.00 0.00 3.35
1050 1069 4.452733 GGGTTCGTCGGCCAGAGG 62.453 72.222 2.24 7.25 36.16 3.69
1051 1070 3.379445 GGTTCGTCGGCCAGAGGA 61.379 66.667 2.24 9.65 41.46 3.71
1053 1072 2.654877 TTCGTCGGCCAGAGGAAC 59.345 61.111 20.89 3.01 45.47 3.62
1054 1073 2.939261 TTCGTCGGCCAGAGGAACC 61.939 63.158 20.89 1.93 45.47 3.62
1055 1074 3.691342 CGTCGGCCAGAGGAACCA 61.691 66.667 2.24 0.00 36.91 3.67
1056 1075 2.990479 GTCGGCCAGAGGAACCAT 59.010 61.111 2.24 0.00 0.00 3.55
1057 1076 1.450312 GTCGGCCAGAGGAACCATG 60.450 63.158 2.24 0.00 0.00 3.66
1058 1077 2.825836 CGGCCAGAGGAACCATGC 60.826 66.667 2.24 0.00 0.00 4.06
1059 1078 2.440980 GGCCAGAGGAACCATGCC 60.441 66.667 0.00 0.00 0.00 4.40
1060 1079 2.440980 GCCAGAGGAACCATGCCC 60.441 66.667 0.00 0.00 0.00 5.36
1061 1080 3.089838 CCAGAGGAACCATGCCCA 58.910 61.111 0.00 0.00 0.00 5.36
1062 1081 1.077212 CCAGAGGAACCATGCCCAG 60.077 63.158 0.00 0.00 0.00 4.45
1063 1082 1.751927 CAGAGGAACCATGCCCAGC 60.752 63.158 0.00 0.00 0.00 4.85
1064 1083 2.825836 GAGGAACCATGCCCAGCG 60.826 66.667 0.00 0.00 0.00 5.18
1065 1084 4.431131 AGGAACCATGCCCAGCGG 62.431 66.667 0.00 0.00 0.00 5.52
1116 1135 4.084888 CGCCGACGAACTTTGCCC 62.085 66.667 0.00 0.00 43.93 5.36
1117 1136 3.733960 GCCGACGAACTTTGCCCC 61.734 66.667 0.00 0.00 0.00 5.80
1118 1137 2.281208 CCGACGAACTTTGCCCCA 60.281 61.111 0.00 0.00 0.00 4.96
1119 1138 2.325082 CCGACGAACTTTGCCCCAG 61.325 63.158 0.00 0.00 0.00 4.45
1120 1139 2.325082 CGACGAACTTTGCCCCAGG 61.325 63.158 0.00 0.00 0.00 4.45
1121 1140 1.971695 GACGAACTTTGCCCCAGGG 60.972 63.158 0.00 0.00 38.57 4.45
1122 1141 2.406002 GACGAACTTTGCCCCAGGGA 62.406 60.000 7.25 0.00 37.50 4.20
1123 1142 1.971695 CGAACTTTGCCCCAGGGAC 60.972 63.158 7.25 0.00 37.50 4.46
1124 1143 1.971695 GAACTTTGCCCCAGGGACG 60.972 63.158 7.25 0.00 37.50 4.79
1125 1144 4.660938 ACTTTGCCCCAGGGACGC 62.661 66.667 7.25 2.82 37.50 5.19
1147 1166 4.803426 GGTCTGCGAGCTCGGGTG 62.803 72.222 35.10 10.14 40.23 4.61
1167 1186 2.279073 CGAGGGGAGGAGCCAGTA 59.721 66.667 0.00 0.00 38.95 2.74
1168 1187 1.830408 CGAGGGGAGGAGCCAGTAG 60.830 68.421 0.00 0.00 38.95 2.57
1169 1188 1.458588 GAGGGGAGGAGCCAGTAGG 60.459 68.421 0.00 0.00 38.95 3.18
1170 1189 2.446802 GGGGAGGAGCCAGTAGGG 60.447 72.222 0.00 0.00 38.95 3.53
1177 1196 3.097293 AGCCAGTAGGGTCGAGGA 58.903 61.111 0.00 0.00 43.69 3.71
1178 1197 1.076632 AGCCAGTAGGGTCGAGGAG 60.077 63.158 0.00 0.00 43.69 3.69
1179 1198 2.128507 GCCAGTAGGGTCGAGGAGG 61.129 68.421 0.00 0.00 39.65 4.30
1180 1199 1.306970 CCAGTAGGGTCGAGGAGGT 59.693 63.158 0.00 0.00 0.00 3.85
1181 1200 1.038130 CCAGTAGGGTCGAGGAGGTG 61.038 65.000 0.00 0.00 0.00 4.00
1182 1201 1.038130 CAGTAGGGTCGAGGAGGTGG 61.038 65.000 0.00 0.00 0.00 4.61
1183 1202 1.757340 GTAGGGTCGAGGAGGTGGG 60.757 68.421 0.00 0.00 0.00 4.61
1184 1203 3.674050 TAGGGTCGAGGAGGTGGGC 62.674 68.421 0.00 0.00 0.00 5.36
1220 1239 4.166888 GGCTGGCGATGGAGAGCA 62.167 66.667 0.00 0.00 32.83 4.26
1221 1240 2.110627 GCTGGCGATGGAGAGCAT 59.889 61.111 0.00 0.00 34.54 3.79
1222 1241 1.960250 GCTGGCGATGGAGAGCATC 60.960 63.158 0.00 0.00 34.54 3.91
1234 1253 3.719121 AGCATCTCAGGCTCGGTT 58.281 55.556 0.00 0.00 36.81 4.44
1235 1254 1.220206 AGCATCTCAGGCTCGGTTG 59.780 57.895 0.00 0.00 36.81 3.77
1236 1255 1.219124 GCATCTCAGGCTCGGTTGA 59.781 57.895 0.00 0.00 0.00 3.18
1237 1256 0.809241 GCATCTCAGGCTCGGTTGAG 60.809 60.000 0.00 0.00 45.49 3.02
1238 1257 0.179089 CATCTCAGGCTCGGTTGAGG 60.179 60.000 1.44 0.00 42.79 3.86
1239 1258 0.324738 ATCTCAGGCTCGGTTGAGGA 60.325 55.000 1.44 0.00 42.79 3.71
1240 1259 0.967887 TCTCAGGCTCGGTTGAGGAG 60.968 60.000 1.44 0.00 42.79 3.69
1241 1260 1.954362 CTCAGGCTCGGTTGAGGAGG 61.954 65.000 0.00 0.00 42.79 4.30
1242 1261 1.984570 CAGGCTCGGTTGAGGAGGA 60.985 63.158 0.00 0.00 42.79 3.71
1243 1262 1.985116 AGGCTCGGTTGAGGAGGAC 60.985 63.158 0.00 0.00 42.79 3.85
1244 1263 2.182030 GCTCGGTTGAGGAGGACG 59.818 66.667 0.00 0.00 42.79 4.79
1245 1264 2.341101 GCTCGGTTGAGGAGGACGA 61.341 63.158 0.00 0.00 42.79 4.20
1246 1265 1.507174 CTCGGTTGAGGAGGACGAC 59.493 63.158 0.00 0.00 38.65 4.34
1247 1266 2.178521 CGGTTGAGGAGGACGACG 59.821 66.667 0.00 0.00 0.00 5.12
1248 1267 2.572284 GGTTGAGGAGGACGACGG 59.428 66.667 0.00 0.00 0.00 4.79
1249 1268 2.572284 GTTGAGGAGGACGACGGG 59.428 66.667 0.00 0.00 0.00 5.28
1250 1269 2.116772 TTGAGGAGGACGACGGGT 59.883 61.111 0.00 0.00 0.00 5.28
1251 1270 1.975407 TTGAGGAGGACGACGGGTC 60.975 63.158 0.00 0.66 45.31 4.46
1272 1291 2.892425 GGCGAAGATGGCCGTGAG 60.892 66.667 0.00 0.00 41.39 3.51
1273 1292 3.567797 GCGAAGATGGCCGTGAGC 61.568 66.667 0.00 0.00 42.60 4.26
1284 1303 4.899239 CGTGAGCAGGGGATCGGC 62.899 72.222 0.00 0.00 36.81 5.54
1285 1304 4.899239 GTGAGCAGGGGATCGGCG 62.899 72.222 0.00 0.00 41.48 6.46
1302 1324 2.876645 GAGGCGCGTCTGTTCTCG 60.877 66.667 22.58 0.00 0.00 4.04
1312 1334 2.080693 GTCTGTTCTCGCTCTCTCTCA 58.919 52.381 0.00 0.00 0.00 3.27
1315 1337 2.487762 CTGTTCTCGCTCTCTCTCACTT 59.512 50.000 0.00 0.00 0.00 3.16
1316 1338 2.227626 TGTTCTCGCTCTCTCTCACTTG 59.772 50.000 0.00 0.00 0.00 3.16
1317 1339 1.458398 TCTCGCTCTCTCTCACTTGG 58.542 55.000 0.00 0.00 0.00 3.61
1318 1340 1.173043 CTCGCTCTCTCTCACTTGGT 58.827 55.000 0.00 0.00 0.00 3.67
1320 1342 0.108898 CGCTCTCTCTCACTTGGTGG 60.109 60.000 0.00 0.00 33.87 4.61
1321 1343 0.390998 GCTCTCTCTCACTTGGTGGC 60.391 60.000 0.00 0.00 33.87 5.01
1322 1344 0.108898 CTCTCTCTCACTTGGTGGCG 60.109 60.000 0.00 0.00 33.87 5.69
1323 1345 1.739562 CTCTCTCACTTGGTGGCGC 60.740 63.158 0.00 0.00 33.87 6.53
1324 1346 2.031012 CTCTCACTTGGTGGCGCA 59.969 61.111 10.83 0.00 33.87 6.09
1326 1348 2.591429 CTCACTTGGTGGCGCACA 60.591 61.111 10.83 1.22 35.86 4.57
1327 1349 2.591429 TCACTTGGTGGCGCACAG 60.591 61.111 10.83 2.95 35.86 3.66
1337 1359 3.706373 GCGCACAGGAGGGAGGAA 61.706 66.667 0.30 0.00 0.00 3.36
1346 1368 1.116536 GGAGGGAGGAAGGGATCGAC 61.117 65.000 0.00 0.00 0.00 4.20
1407 1429 1.305381 CAGAGGGGAACGAGAGGGT 60.305 63.158 0.00 0.00 0.00 4.34
1421 1443 1.152096 AGGGTTTGAGGGGTCGAGT 60.152 57.895 0.00 0.00 0.00 4.18
1428 1450 1.076923 GAGGGGTCGAGTGGCTAGA 60.077 63.158 0.00 0.00 0.00 2.43
1517 1556 3.758554 GTGCTCTCTCTCTCCCTCATATC 59.241 52.174 0.00 0.00 0.00 1.63
1518 1557 3.657239 TGCTCTCTCTCTCCCTCATATCT 59.343 47.826 0.00 0.00 0.00 1.98
1519 1558 4.263462 TGCTCTCTCTCTCCCTCATATCTC 60.263 50.000 0.00 0.00 0.00 2.75
1520 1559 4.018960 GCTCTCTCTCTCCCTCATATCTCT 60.019 50.000 0.00 0.00 0.00 3.10
1526 1565 8.704849 TCTCTCTCCCTCATATCTCTTTTAAG 57.295 38.462 0.00 0.00 0.00 1.85
1577 1621 3.012502 GGGAGGGTTAGGGAAAGGATTTT 59.987 47.826 0.00 0.00 39.27 1.82
1594 1638 1.627864 TTTTTGCAAGGGGGCTACTC 58.372 50.000 0.00 0.00 34.04 2.59
1618 1662 3.938963 TCCGGACTCATAAAAATGTGCTC 59.061 43.478 0.00 0.00 0.00 4.26
1668 1714 8.907222 AGATTGCAAGGTTTAAATTCAAATGT 57.093 26.923 4.94 0.00 0.00 2.71
1669 1715 8.776470 AGATTGCAAGGTTTAAATTCAAATGTG 58.224 29.630 4.94 0.00 0.00 3.21
1670 1716 6.297694 TGCAAGGTTTAAATTCAAATGTGC 57.702 33.333 0.00 0.00 0.00 4.57
1672 1718 6.202570 TGCAAGGTTTAAATTCAAATGTGCTC 59.797 34.615 7.62 0.00 0.00 4.26
1673 1719 6.202570 GCAAGGTTTAAATTCAAATGTGCTCA 59.797 34.615 0.00 0.00 0.00 4.26
1674 1720 7.095102 GCAAGGTTTAAATTCAAATGTGCTCAT 60.095 33.333 0.00 0.00 35.59 2.90
1676 1722 8.538409 AGGTTTAAATTCAAATGTGCTCATTC 57.462 30.769 13.98 0.00 42.60 2.67
1677 1723 7.603784 AGGTTTAAATTCAAATGTGCTCATTCC 59.396 33.333 13.98 7.29 42.60 3.01
1682 1728 7.804843 AATTCAAATGTGCTCATTCCAAAAA 57.195 28.000 13.98 5.72 42.60 1.94
1701 1747 4.980339 AAAAATTGGAGTGGGCAAGATT 57.020 36.364 0.00 0.00 0.00 2.40
1702 1748 3.967332 AAATTGGAGTGGGCAAGATTG 57.033 42.857 0.00 0.00 0.00 2.67
1730 1777 5.313712 GTTTGAATAGGAAGTGAGGGTTGA 58.686 41.667 0.00 0.00 0.00 3.18
1788 1836 7.062255 GGCTCCGATAAACAAAGAAAGAAAATG 59.938 37.037 0.00 0.00 0.00 2.32
1852 1907 2.706555 TTTGTTTGCACGTGTGTTGA 57.293 40.000 18.38 0.00 0.00 3.18
1861 1917 3.378742 TGCACGTGTGTTGAGGTTAATTT 59.621 39.130 18.38 0.00 0.00 1.82
1955 2021 9.237846 GTGAATTTTCTCGATTTAAATGGATCC 57.762 33.333 12.58 4.20 0.00 3.36
1956 2022 8.128582 TGAATTTTCTCGATTTAAATGGATCCG 58.871 33.333 12.58 6.62 0.00 4.18
1976 2042 8.025445 GGATCCGAGATCCATTCAATTTATTTG 58.975 37.037 21.31 0.00 38.09 2.32
2020 2101 2.766970 TGATGACATGATGCAATGCG 57.233 45.000 0.00 0.00 0.00 4.73
2028 2109 3.316868 ACATGATGCAATGCGAATGATGA 59.683 39.130 17.48 0.00 0.00 2.92
2029 2110 3.343380 TGATGCAATGCGAATGATGAC 57.657 42.857 0.00 0.00 0.00 3.06
2031 2112 3.316868 TGATGCAATGCGAATGATGACAT 59.683 39.130 0.00 0.00 38.50 3.06
2067 2150 3.003275 AGCAAACAAATCACACGACGAAT 59.997 39.130 0.00 0.00 0.00 3.34
2076 2159 0.447011 ACACGACGAATCTCGGAGTC 59.553 55.000 0.00 0.00 45.59 3.36
2091 2174 1.213926 GGAGTCCATGGAAGGCATCTT 59.786 52.381 18.20 0.00 35.62 2.40
2122 2205 0.251121 TTGGGGCGTCACAATCACAT 60.251 50.000 0.00 0.00 0.00 3.21
2123 2206 0.676466 TGGGGCGTCACAATCACATC 60.676 55.000 0.00 0.00 0.00 3.06
2124 2207 0.676466 GGGGCGTCACAATCACATCA 60.676 55.000 0.00 0.00 0.00 3.07
2126 2209 1.745087 GGGCGTCACAATCACATCATT 59.255 47.619 0.00 0.00 0.00 2.57
2127 2210 2.223340 GGGCGTCACAATCACATCATTC 60.223 50.000 0.00 0.00 0.00 2.67
2128 2211 2.679837 GGCGTCACAATCACATCATTCT 59.320 45.455 0.00 0.00 0.00 2.40
2129 2212 3.242543 GGCGTCACAATCACATCATTCTC 60.243 47.826 0.00 0.00 0.00 2.87
2130 2213 3.620374 GCGTCACAATCACATCATTCTCT 59.380 43.478 0.00 0.00 0.00 3.10
2131 2214 4.805719 GCGTCACAATCACATCATTCTCTA 59.194 41.667 0.00 0.00 0.00 2.43
2132 2215 5.291858 GCGTCACAATCACATCATTCTCTAA 59.708 40.000 0.00 0.00 0.00 2.10
2133 2216 6.018425 GCGTCACAATCACATCATTCTCTAAT 60.018 38.462 0.00 0.00 0.00 1.73
2134 2217 7.342942 CGTCACAATCACATCATTCTCTAATG 58.657 38.462 0.00 0.00 43.32 1.90
2146 2229 7.370905 TCATTCTCTAATGATGTGATCCTGT 57.629 36.000 0.00 0.00 45.17 4.00
2147 2230 7.799081 TCATTCTCTAATGATGTGATCCTGTT 58.201 34.615 0.00 0.00 45.17 3.16
2148 2231 7.930325 TCATTCTCTAATGATGTGATCCTGTTC 59.070 37.037 0.00 0.00 45.17 3.18
2149 2232 6.796785 TCTCTAATGATGTGATCCTGTTCA 57.203 37.500 0.00 0.00 0.00 3.18
2150 2233 7.370905 TCTCTAATGATGTGATCCTGTTCAT 57.629 36.000 0.00 0.00 0.00 2.57
2151 2234 7.799081 TCTCTAATGATGTGATCCTGTTCATT 58.201 34.615 12.18 12.18 39.58 2.57
2152 2235 8.927411 TCTCTAATGATGTGATCCTGTTCATTA 58.073 33.333 12.82 12.82 37.92 1.90
2153 2236 9.551734 CTCTAATGATGTGATCCTGTTCATTAA 57.448 33.333 13.72 8.00 38.26 1.40
2154 2237 9.904198 TCTAATGATGTGATCCTGTTCATTAAA 57.096 29.630 13.72 4.20 38.26 1.52
2157 2240 8.756486 ATGATGTGATCCTGTTCATTAAATGA 57.244 30.769 0.00 0.00 37.55 2.57
2158 2241 7.988737 TGATGTGATCCTGTTCATTAAATGAC 58.011 34.615 0.00 0.00 39.39 3.06
2159 2242 7.611079 TGATGTGATCCTGTTCATTAAATGACA 59.389 33.333 0.00 0.00 39.39 3.58
2160 2243 7.757941 TGTGATCCTGTTCATTAAATGACAA 57.242 32.000 0.00 0.00 39.39 3.18
2161 2244 7.592938 TGTGATCCTGTTCATTAAATGACAAC 58.407 34.615 0.00 0.00 39.39 3.32
2162 2245 7.230309 TGTGATCCTGTTCATTAAATGACAACA 59.770 33.333 0.00 0.00 39.39 3.33
2163 2246 7.538678 GTGATCCTGTTCATTAAATGACAACAC 59.461 37.037 0.00 0.00 39.39 3.32
2164 2247 6.951062 TCCTGTTCATTAAATGACAACACA 57.049 33.333 0.00 0.00 39.39 3.72
2165 2248 7.523293 TCCTGTTCATTAAATGACAACACAT 57.477 32.000 0.00 0.00 39.39 3.21
2166 2249 7.369607 TCCTGTTCATTAAATGACAACACATG 58.630 34.615 0.00 0.00 39.39 3.21
2178 2261 3.942829 ACAACACATGTCTATGGTCAGG 58.057 45.455 0.00 0.00 37.96 3.86
2179 2262 3.582647 ACAACACATGTCTATGGTCAGGA 59.417 43.478 0.00 0.00 37.96 3.86
2180 2263 4.041567 ACAACACATGTCTATGGTCAGGAA 59.958 41.667 0.00 0.00 37.96 3.36
2181 2264 4.908601 ACACATGTCTATGGTCAGGAAA 57.091 40.909 0.00 0.00 38.66 3.13
2182 2265 4.579869 ACACATGTCTATGGTCAGGAAAC 58.420 43.478 0.00 0.00 38.66 2.78
2183 2266 4.287067 ACACATGTCTATGGTCAGGAAACT 59.713 41.667 0.00 0.00 39.13 2.66
2184 2267 5.221925 ACACATGTCTATGGTCAGGAAACTT 60.222 40.000 0.00 0.00 37.29 2.66
2185 2268 6.013725 ACACATGTCTATGGTCAGGAAACTTA 60.014 38.462 0.00 0.00 37.29 2.24
2186 2269 6.878923 CACATGTCTATGGTCAGGAAACTTAA 59.121 38.462 0.00 0.00 37.29 1.85
2187 2270 6.879458 ACATGTCTATGGTCAGGAAACTTAAC 59.121 38.462 0.00 0.00 37.29 2.01
2188 2271 5.801380 TGTCTATGGTCAGGAAACTTAACC 58.199 41.667 0.00 0.00 40.21 2.85
2189 2272 5.308497 TGTCTATGGTCAGGAAACTTAACCA 59.692 40.000 0.00 0.00 40.21 3.67
2190 2273 6.012858 TGTCTATGGTCAGGAAACTTAACCAT 60.013 38.462 9.96 9.96 40.21 3.55
2191 2274 6.539103 GTCTATGGTCAGGAAACTTAACCATC 59.461 42.308 8.50 0.00 40.21 3.51
2192 2275 4.993705 TGGTCAGGAAACTTAACCATCT 57.006 40.909 0.00 0.00 40.21 2.90
2193 2276 5.319043 TGGTCAGGAAACTTAACCATCTT 57.681 39.130 0.00 0.00 40.21 2.40
2194 2277 5.701224 TGGTCAGGAAACTTAACCATCTTT 58.299 37.500 0.00 0.00 40.21 2.52
2195 2278 5.534654 TGGTCAGGAAACTTAACCATCTTTG 59.465 40.000 0.00 0.00 40.21 2.77
2196 2279 5.768164 GGTCAGGAAACTTAACCATCTTTGA 59.232 40.000 0.00 0.00 40.21 2.69
2197 2280 6.434340 GGTCAGGAAACTTAACCATCTTTGAT 59.566 38.462 0.00 0.00 40.21 2.57
2198 2281 7.039714 GGTCAGGAAACTTAACCATCTTTGATT 60.040 37.037 0.00 0.00 40.21 2.57
2199 2282 9.010029 GTCAGGAAACTTAACCATCTTTGATTA 57.990 33.333 0.00 0.00 40.21 1.75
2200 2283 9.581289 TCAGGAAACTTAACCATCTTTGATTAA 57.419 29.630 0.00 0.00 40.21 1.40
2201 2284 9.626045 CAGGAAACTTAACCATCTTTGATTAAC 57.374 33.333 0.00 0.00 40.21 2.01
2202 2285 8.512138 AGGAAACTTAACCATCTTTGATTAACG 58.488 33.333 0.00 0.00 37.44 3.18
2203 2286 8.508875 GGAAACTTAACCATCTTTGATTAACGA 58.491 33.333 0.00 0.00 0.00 3.85
2204 2287 9.543018 GAAACTTAACCATCTTTGATTAACGAG 57.457 33.333 0.00 0.00 0.00 4.18
2205 2288 7.073342 ACTTAACCATCTTTGATTAACGAGC 57.927 36.000 0.00 0.00 0.00 5.03
2206 2289 6.879458 ACTTAACCATCTTTGATTAACGAGCT 59.121 34.615 0.00 0.00 0.00 4.09
2207 2290 8.038944 ACTTAACCATCTTTGATTAACGAGCTA 58.961 33.333 0.00 0.00 0.00 3.32
2208 2291 6.910536 AACCATCTTTGATTAACGAGCTAG 57.089 37.500 0.00 0.00 0.00 3.42
2209 2292 5.978814 ACCATCTTTGATTAACGAGCTAGT 58.021 37.500 0.00 0.00 0.00 2.57
2210 2293 6.043411 ACCATCTTTGATTAACGAGCTAGTC 58.957 40.000 0.00 0.00 0.00 2.59
2211 2294 6.127310 ACCATCTTTGATTAACGAGCTAGTCT 60.127 38.462 0.00 0.00 0.00 3.24
2212 2295 7.068348 ACCATCTTTGATTAACGAGCTAGTCTA 59.932 37.037 0.00 0.00 0.00 2.59
2213 2296 7.593273 CCATCTTTGATTAACGAGCTAGTCTAG 59.407 40.741 0.00 2.18 0.00 2.43
2214 2297 7.627298 TCTTTGATTAACGAGCTAGTCTAGT 57.373 36.000 8.68 0.00 31.68 2.57
2215 2298 8.728337 TCTTTGATTAACGAGCTAGTCTAGTA 57.272 34.615 8.68 0.00 30.15 1.82
2216 2299 8.828644 TCTTTGATTAACGAGCTAGTCTAGTAG 58.171 37.037 8.68 3.39 30.15 2.57
2217 2300 8.728337 TTTGATTAACGAGCTAGTCTAGTAGA 57.272 34.615 8.68 0.00 30.15 2.59
2218 2301 7.949903 TGATTAACGAGCTAGTCTAGTAGAG 57.050 40.000 8.68 1.49 30.15 2.43
2219 2302 6.930164 TGATTAACGAGCTAGTCTAGTAGAGG 59.070 42.308 8.68 0.00 30.15 3.69
2220 2303 3.116079 ACGAGCTAGTCTAGTAGAGGC 57.884 52.381 8.68 5.92 0.00 4.70
2221 2304 2.435069 ACGAGCTAGTCTAGTAGAGGCA 59.565 50.000 16.80 0.65 29.21 4.75
2222 2305 3.071892 ACGAGCTAGTCTAGTAGAGGCAT 59.928 47.826 16.80 6.81 29.21 4.40
2223 2306 4.283978 ACGAGCTAGTCTAGTAGAGGCATA 59.716 45.833 16.80 3.22 29.21 3.14
2224 2307 4.628333 CGAGCTAGTCTAGTAGAGGCATAC 59.372 50.000 16.80 9.78 29.21 2.39
2225 2308 5.568023 CGAGCTAGTCTAGTAGAGGCATACT 60.568 48.000 16.80 7.45 39.35 2.12
2226 2309 6.350361 CGAGCTAGTCTAGTAGAGGCATACTA 60.350 46.154 16.80 8.70 37.24 1.82
2227 2310 7.319052 AGCTAGTCTAGTAGAGGCATACTAA 57.681 40.000 16.80 1.67 37.70 2.24
2228 2311 7.747690 AGCTAGTCTAGTAGAGGCATACTAAA 58.252 38.462 16.80 0.00 37.70 1.85
2229 2312 7.881232 AGCTAGTCTAGTAGAGGCATACTAAAG 59.119 40.741 16.80 3.39 37.70 1.85
2230 2313 7.879160 GCTAGTCTAGTAGAGGCATACTAAAGA 59.121 40.741 8.68 5.22 37.70 2.52
2231 2314 9.211485 CTAGTCTAGTAGAGGCATACTAAAGAC 57.789 40.741 16.98 16.98 37.70 3.01
2232 2315 7.575505 AGTCTAGTAGAGGCATACTAAAGACA 58.424 38.462 21.98 3.32 37.70 3.41
2233 2316 7.499895 AGTCTAGTAGAGGCATACTAAAGACAC 59.500 40.741 21.98 11.20 37.70 3.67
2234 2317 7.499895 GTCTAGTAGAGGCATACTAAAGACACT 59.500 40.741 18.45 5.72 37.70 3.55
2235 2318 6.702716 AGTAGAGGCATACTAAAGACACTC 57.297 41.667 1.01 0.00 34.21 3.51
2236 2319 6.428295 AGTAGAGGCATACTAAAGACACTCT 58.572 40.000 1.01 0.00 34.21 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.282901 TGCTGTACAGTGTATGCATATTTTCAT 59.717 33.333 23.44 0.00 0.00 2.57
470 483 5.625150 AGTTGAGTCTGCAATTAGGAACTT 58.375 37.500 0.00 0.00 41.75 2.66
616 635 9.643652 TTCGTGTTGAAAATATTTGCATTTTTC 57.356 25.926 9.75 13.46 38.04 2.29
643 662 4.523558 CCCAAAGACCCGTTTAAAACCATA 59.476 41.667 0.00 0.00 0.00 2.74
677 696 3.031736 GGGCTCACTAGATGACCAGTTA 58.968 50.000 0.00 0.00 32.86 2.24
700 719 2.335011 GCCTTCGTGCCGCTTTTT 59.665 55.556 0.00 0.00 0.00 1.94
701 720 3.670377 GGCCTTCGTGCCGCTTTT 61.670 61.111 0.00 0.00 42.54 2.27
712 731 0.175989 ACCTTCGAATCGAGGCCTTC 59.824 55.000 6.77 0.00 37.14 3.46
713 732 0.108138 CACCTTCGAATCGAGGCCTT 60.108 55.000 6.77 0.00 37.14 4.35
714 733 1.517832 CACCTTCGAATCGAGGCCT 59.482 57.895 3.86 3.86 37.14 5.19
715 734 1.521681 CCACCTTCGAATCGAGGCC 60.522 63.158 16.91 0.00 37.14 5.19
716 735 1.521681 CCCACCTTCGAATCGAGGC 60.522 63.158 16.91 0.00 37.14 4.70
717 736 1.144057 CCCCACCTTCGAATCGAGG 59.856 63.158 15.88 15.88 37.14 4.63
718 737 0.179108 GACCCCACCTTCGAATCGAG 60.179 60.000 5.24 0.00 37.14 4.04
719 738 1.610554 GGACCCCACCTTCGAATCGA 61.611 60.000 0.00 0.00 0.00 3.59
720 739 1.153429 GGACCCCACCTTCGAATCG 60.153 63.158 0.00 0.00 0.00 3.34
721 740 1.153429 CGGACCCCACCTTCGAATC 60.153 63.158 0.00 0.00 0.00 2.52
722 741 1.611261 TCGGACCCCACCTTCGAAT 60.611 57.895 0.00 0.00 0.00 3.34
723 742 2.203669 TCGGACCCCACCTTCGAA 60.204 61.111 0.00 0.00 0.00 3.71
724 743 2.678934 CTCGGACCCCACCTTCGA 60.679 66.667 0.00 0.00 0.00 3.71
725 744 4.452733 GCTCGGACCCCACCTTCG 62.453 72.222 0.00 0.00 0.00 3.79
726 745 3.003763 AGCTCGGACCCCACCTTC 61.004 66.667 0.00 0.00 0.00 3.46
727 746 3.322466 CAGCTCGGACCCCACCTT 61.322 66.667 0.00 0.00 0.00 3.50
735 754 3.075005 TAGTGCCCCAGCTCGGAC 61.075 66.667 0.00 0.00 40.80 4.79
736 755 3.075005 GTAGTGCCCCAGCTCGGA 61.075 66.667 0.00 0.00 40.80 4.55
737 756 3.376935 CTGTAGTGCCCCAGCTCGG 62.377 68.421 0.00 0.00 40.80 4.63
738 757 2.185350 CTGTAGTGCCCCAGCTCG 59.815 66.667 0.00 0.00 40.80 5.03
742 761 1.377725 CCTTGCTGTAGTGCCCCAG 60.378 63.158 0.00 0.00 0.00 4.45
743 762 2.756400 CCTTGCTGTAGTGCCCCA 59.244 61.111 0.00 0.00 0.00 4.96
744 763 2.751837 GCCTTGCTGTAGTGCCCC 60.752 66.667 0.00 0.00 0.00 5.80
745 764 3.127533 CGCCTTGCTGTAGTGCCC 61.128 66.667 0.00 0.00 0.00 5.36
746 765 3.127533 CCGCCTTGCTGTAGTGCC 61.128 66.667 0.00 0.00 0.00 5.01
747 766 3.804193 GCCGCCTTGCTGTAGTGC 61.804 66.667 0.00 0.00 0.00 4.40
748 767 3.490759 CGCCGCCTTGCTGTAGTG 61.491 66.667 0.00 0.00 0.00 2.74
763 782 4.615815 ATCCAGATGGCCGAGCGC 62.616 66.667 0.00 0.00 34.44 5.92
764 783 2.664185 CATCCAGATGGCCGAGCG 60.664 66.667 0.00 0.00 35.24 5.03
765 784 1.596477 GTCATCCAGATGGCCGAGC 60.596 63.158 7.76 0.00 37.45 5.03
766 785 0.531532 GTGTCATCCAGATGGCCGAG 60.532 60.000 9.63 0.00 42.47 4.63
767 786 1.522092 GTGTCATCCAGATGGCCGA 59.478 57.895 9.63 0.00 42.47 5.54
768 787 1.884464 CGTGTCATCCAGATGGCCG 60.884 63.158 9.63 8.78 42.47 6.13
769 788 2.182842 GCGTGTCATCCAGATGGCC 61.183 63.158 9.63 0.00 42.47 5.36
770 789 2.528743 CGCGTGTCATCCAGATGGC 61.529 63.158 5.28 5.28 43.38 4.40
771 790 0.873312 CTCGCGTGTCATCCAGATGG 60.873 60.000 5.77 0.00 39.24 3.51
772 791 0.873312 CCTCGCGTGTCATCCAGATG 60.873 60.000 5.77 0.98 40.09 2.90
773 792 1.323271 ACCTCGCGTGTCATCCAGAT 61.323 55.000 5.77 0.00 0.00 2.90
774 793 1.977009 ACCTCGCGTGTCATCCAGA 60.977 57.895 5.77 0.00 0.00 3.86
775 794 1.807165 CACCTCGCGTGTCATCCAG 60.807 63.158 5.77 0.00 37.73 3.86
776 795 2.261361 CACCTCGCGTGTCATCCA 59.739 61.111 5.77 0.00 37.73 3.41
777 796 3.188786 GCACCTCGCGTGTCATCC 61.189 66.667 5.77 0.00 44.97 3.51
798 817 2.674380 CCTGCTCCAGGCACAACC 60.674 66.667 0.00 0.00 45.13 3.77
806 825 2.509916 GAGATGCCCCTGCTCCAG 59.490 66.667 0.00 0.00 38.71 3.86
807 826 3.092511 GGAGATGCCCCTGCTCCA 61.093 66.667 0.00 0.00 45.89 3.86
808 827 2.771762 AGGAGATGCCCCTGCTCC 60.772 66.667 0.00 0.00 46.75 4.70
809 828 2.828145 GAGGAGATGCCCCTGCTC 59.172 66.667 7.90 7.90 42.78 4.26
810 829 3.160047 CGAGGAGATGCCCCTGCT 61.160 66.667 0.00 0.00 37.56 4.24
811 830 3.157252 TCGAGGAGATGCCCCTGC 61.157 66.667 0.00 0.00 37.37 4.85
812 831 2.818132 GTCGAGGAGATGCCCCTG 59.182 66.667 0.00 0.00 37.37 4.45
813 832 2.835431 CGTCGAGGAGATGCCCCT 60.835 66.667 0.00 0.00 37.37 4.79
818 837 4.933064 GCCGGCGTCGAGGAGATG 62.933 72.222 12.58 0.00 39.00 2.90
831 850 4.519437 TCTGCATCGAGCTGCCGG 62.519 66.667 8.46 0.00 45.94 6.13
832 851 2.960659 CTCTGCATCGAGCTGCCG 60.961 66.667 8.46 2.52 45.94 5.69
838 857 2.895940 TTCGCCTGCTCTGCATCGAG 62.896 60.000 13.41 0.00 41.46 4.04
839 858 2.895940 CTTCGCCTGCTCTGCATCGA 62.896 60.000 11.03 11.03 39.91 3.59
840 859 2.510012 TTCGCCTGCTCTGCATCG 60.510 61.111 0.00 7.62 38.13 3.84
841 860 2.821688 GCTTCGCCTGCTCTGCATC 61.822 63.158 0.00 0.00 38.13 3.91
842 861 2.823147 GCTTCGCCTGCTCTGCAT 60.823 61.111 0.00 0.00 38.13 3.96
843 862 4.318949 TGCTTCGCCTGCTCTGCA 62.319 61.111 0.00 0.00 36.92 4.41
844 863 3.497932 CTGCTTCGCCTGCTCTGC 61.498 66.667 0.00 0.00 0.00 4.26
845 864 2.818714 CCTGCTTCGCCTGCTCTG 60.819 66.667 0.00 0.00 0.00 3.35
846 865 4.093291 CCCTGCTTCGCCTGCTCT 62.093 66.667 0.00 0.00 0.00 4.09
847 866 4.400961 ACCCTGCTTCGCCTGCTC 62.401 66.667 0.00 0.00 0.00 4.26
848 867 4.400961 GACCCTGCTTCGCCTGCT 62.401 66.667 0.00 0.00 0.00 4.24
854 873 1.658717 CGATAGCGACCCTGCTTCG 60.659 63.158 0.00 0.38 44.46 3.79
855 874 0.595310 GACGATAGCGACCCTGCTTC 60.595 60.000 7.69 0.00 44.46 3.86
856 875 1.437986 GACGATAGCGACCCTGCTT 59.562 57.895 7.69 0.00 44.46 3.91
858 877 2.353607 CGACGATAGCGACCCTGC 60.354 66.667 7.69 0.00 41.64 4.85
859 878 1.280142 CTCGACGATAGCGACCCTG 59.720 63.158 7.69 0.00 39.10 4.45
860 879 2.544698 GCTCGACGATAGCGACCCT 61.545 63.158 7.69 0.00 39.10 4.34
861 880 2.051166 GCTCGACGATAGCGACCC 60.051 66.667 7.69 0.00 39.10 4.46
862 881 1.369448 CTGCTCGACGATAGCGACC 60.369 63.158 7.69 0.00 43.11 4.79
863 882 2.006587 GCTGCTCGACGATAGCGAC 61.007 63.158 7.69 0.00 43.11 5.19
864 883 2.180862 AGCTGCTCGACGATAGCGA 61.181 57.895 21.22 0.00 43.11 4.93
865 884 2.008168 CAGCTGCTCGACGATAGCG 61.008 63.158 21.22 0.00 43.11 4.26
866 885 2.299347 GCAGCTGCTCGACGATAGC 61.299 63.158 31.33 20.39 40.50 2.97
867 886 3.915010 GCAGCTGCTCGACGATAG 58.085 61.111 31.33 1.26 39.45 2.08
881 900 3.264947 CTGCTTGGCTGTCAGCAG 58.735 61.111 25.68 16.27 44.75 4.24
883 902 4.099170 CGCTGCTTGGCTGTCAGC 62.099 66.667 16.93 16.93 46.98 4.26
884 903 2.357881 TCGCTGCTTGGCTGTCAG 60.358 61.111 0.00 0.00 0.00 3.51
885 904 2.666190 GTCGCTGCTTGGCTGTCA 60.666 61.111 0.00 0.00 0.00 3.58
886 905 2.037136 ATGTCGCTGCTTGGCTGTC 61.037 57.895 0.00 0.00 0.00 3.51
887 906 2.033141 ATGTCGCTGCTTGGCTGT 59.967 55.556 0.00 0.00 0.00 4.40
888 907 2.483745 CATGTCGCTGCTTGGCTG 59.516 61.111 0.00 0.00 0.00 4.85
889 908 2.749044 CCATGTCGCTGCTTGGCT 60.749 61.111 0.00 0.00 0.00 4.75
890 909 2.747460 TCCATGTCGCTGCTTGGC 60.747 61.111 0.00 0.00 34.71 4.52
891 910 2.110967 CCTCCATGTCGCTGCTTGG 61.111 63.158 0.00 0.00 35.67 3.61
892 911 1.376424 ACCTCCATGTCGCTGCTTG 60.376 57.895 0.00 0.00 0.00 4.01
893 912 1.376424 CACCTCCATGTCGCTGCTT 60.376 57.895 0.00 0.00 0.00 3.91
894 913 2.267006 CACCTCCATGTCGCTGCT 59.733 61.111 0.00 0.00 0.00 4.24
895 914 2.821366 CCACCTCCATGTCGCTGC 60.821 66.667 0.00 0.00 0.00 5.25
896 915 2.124983 CCCACCTCCATGTCGCTG 60.125 66.667 0.00 0.00 0.00 5.18
897 916 3.402681 CCCCACCTCCATGTCGCT 61.403 66.667 0.00 0.00 0.00 4.93
898 917 2.876368 CTTCCCCACCTCCATGTCGC 62.876 65.000 0.00 0.00 0.00 5.19
899 918 1.221840 CTTCCCCACCTCCATGTCG 59.778 63.158 0.00 0.00 0.00 4.35
900 919 1.077429 GCTTCCCCACCTCCATGTC 60.077 63.158 0.00 0.00 0.00 3.06
901 920 1.852157 TGCTTCCCCACCTCCATGT 60.852 57.895 0.00 0.00 0.00 3.21
902 921 1.077212 CTGCTTCCCCACCTCCATG 60.077 63.158 0.00 0.00 0.00 3.66
903 922 2.311854 CCTGCTTCCCCACCTCCAT 61.312 63.158 0.00 0.00 0.00 3.41
904 923 2.935481 CCTGCTTCCCCACCTCCA 60.935 66.667 0.00 0.00 0.00 3.86
905 924 2.610859 TCCTGCTTCCCCACCTCC 60.611 66.667 0.00 0.00 0.00 4.30
906 925 2.993853 CTCCTGCTTCCCCACCTC 59.006 66.667 0.00 0.00 0.00 3.85
907 926 3.334054 GCTCCTGCTTCCCCACCT 61.334 66.667 0.00 0.00 36.03 4.00
908 927 3.210012 TTGCTCCTGCTTCCCCACC 62.210 63.158 0.00 0.00 40.48 4.61
909 928 1.676967 CTTGCTCCTGCTTCCCCAC 60.677 63.158 0.00 0.00 40.48 4.61
910 929 2.759114 CTTGCTCCTGCTTCCCCA 59.241 61.111 0.00 0.00 40.48 4.96
911 930 2.044551 CCTTGCTCCTGCTTCCCC 60.045 66.667 0.00 0.00 40.48 4.81
912 931 2.753446 GCCTTGCTCCTGCTTCCC 60.753 66.667 0.00 0.00 40.48 3.97
913 932 2.034687 TGCCTTGCTCCTGCTTCC 59.965 61.111 0.00 0.00 40.48 3.46
914 933 2.045131 CCTGCCTTGCTCCTGCTTC 61.045 63.158 0.00 0.00 40.48 3.86
915 934 2.035312 CCTGCCTTGCTCCTGCTT 59.965 61.111 0.00 0.00 40.48 3.91
916 935 4.044439 CCCTGCCTTGCTCCTGCT 62.044 66.667 0.00 0.00 40.48 4.24
917 936 3.991725 CTCCCTGCCTTGCTCCTGC 62.992 68.421 0.00 0.00 40.20 4.85
918 937 2.271497 CTCCCTGCCTTGCTCCTG 59.729 66.667 0.00 0.00 0.00 3.86
919 938 3.013932 CCTCCCTGCCTTGCTCCT 61.014 66.667 0.00 0.00 0.00 3.69
920 939 4.120755 CCCTCCCTGCCTTGCTCC 62.121 72.222 0.00 0.00 0.00 4.70
921 940 4.811364 GCCCTCCCTGCCTTGCTC 62.811 72.222 0.00 0.00 0.00 4.26
924 943 4.785453 GTCGCCCTCCCTGCCTTG 62.785 72.222 0.00 0.00 0.00 3.61
938 957 4.735132 TTCTCGCCTTGCCCGTCG 62.735 66.667 0.00 0.00 0.00 5.12
939 958 2.815647 CTTCTCGCCTTGCCCGTC 60.816 66.667 0.00 0.00 0.00 4.79
940 959 4.394712 CCTTCTCGCCTTGCCCGT 62.395 66.667 0.00 0.00 0.00 5.28
943 962 4.760047 TCGCCTTCTCGCCTTGCC 62.760 66.667 0.00 0.00 0.00 4.52
944 963 3.491652 GTCGCCTTCTCGCCTTGC 61.492 66.667 0.00 0.00 0.00 4.01
945 964 3.181967 CGTCGCCTTCTCGCCTTG 61.182 66.667 0.00 0.00 0.00 3.61
969 988 4.409218 TTCTCCGTCGTTCCCGCG 62.409 66.667 0.00 0.00 34.79 6.46
970 989 2.506438 CTTCTCCGTCGTTCCCGC 60.506 66.667 0.00 0.00 0.00 6.13
971 990 2.181021 CCTTCTCCGTCGTTCCCG 59.819 66.667 0.00 0.00 0.00 5.14
972 991 2.577593 CCCTTCTCCGTCGTTCCC 59.422 66.667 0.00 0.00 0.00 3.97
973 992 2.577593 CCCCTTCTCCGTCGTTCC 59.422 66.667 0.00 0.00 0.00 3.62
974 993 2.577593 CCCCCTTCTCCGTCGTTC 59.422 66.667 0.00 0.00 0.00 3.95
975 994 3.703127 GCCCCCTTCTCCGTCGTT 61.703 66.667 0.00 0.00 0.00 3.85
993 1012 4.918201 CTTCCCCGCATCCTCCGC 62.918 72.222 0.00 0.00 0.00 5.54
994 1013 4.241555 CCTTCCCCGCATCCTCCG 62.242 72.222 0.00 0.00 0.00 4.63
995 1014 3.878667 CCCTTCCCCGCATCCTCC 61.879 72.222 0.00 0.00 0.00 4.30
996 1015 3.878667 CCCCTTCCCCGCATCCTC 61.879 72.222 0.00 0.00 0.00 3.71
997 1016 3.962530 TTCCCCTTCCCCGCATCCT 62.963 63.158 0.00 0.00 0.00 3.24
998 1017 3.416880 TTCCCCTTCCCCGCATCC 61.417 66.667 0.00 0.00 0.00 3.51
999 1018 2.124278 GTTCCCCTTCCCCGCATC 60.124 66.667 0.00 0.00 0.00 3.91
1000 1019 2.938798 TGTTCCCCTTCCCCGCAT 60.939 61.111 0.00 0.00 0.00 4.73
1001 1020 3.646715 CTGTTCCCCTTCCCCGCA 61.647 66.667 0.00 0.00 0.00 5.69
1002 1021 3.327404 TCTGTTCCCCTTCCCCGC 61.327 66.667 0.00 0.00 0.00 6.13
1003 1022 2.990479 CTCTGTTCCCCTTCCCCG 59.010 66.667 0.00 0.00 0.00 5.73
1004 1023 2.677848 GCTCTGTTCCCCTTCCCC 59.322 66.667 0.00 0.00 0.00 4.81
1005 1024 2.677848 GGCTCTGTTCCCCTTCCC 59.322 66.667 0.00 0.00 0.00 3.97
1006 1025 2.269241 CGGCTCTGTTCCCCTTCC 59.731 66.667 0.00 0.00 0.00 3.46
1007 1026 2.245438 CTCCGGCTCTGTTCCCCTTC 62.245 65.000 0.00 0.00 0.00 3.46
1008 1027 2.203938 TCCGGCTCTGTTCCCCTT 60.204 61.111 0.00 0.00 0.00 3.95
1009 1028 2.685380 CTCCGGCTCTGTTCCCCT 60.685 66.667 0.00 0.00 0.00 4.79
1010 1029 3.787001 CCTCCGGCTCTGTTCCCC 61.787 72.222 0.00 0.00 0.00 4.81
1011 1030 4.475135 GCCTCCGGCTCTGTTCCC 62.475 72.222 0.00 0.00 46.69 3.97
1024 1043 4.144703 GACGAACCCTCCCGCCTC 62.145 72.222 0.00 0.00 0.00 4.70
1030 1049 4.452733 CTGGCCGACGAACCCTCC 62.453 72.222 0.00 0.00 0.00 4.30
1031 1050 3.358076 CTCTGGCCGACGAACCCTC 62.358 68.421 0.00 0.00 0.00 4.30
1032 1051 3.382832 CTCTGGCCGACGAACCCT 61.383 66.667 0.00 0.00 0.00 4.34
1033 1052 4.452733 CCTCTGGCCGACGAACCC 62.453 72.222 0.00 0.00 0.00 4.11
1034 1053 2.939261 TTCCTCTGGCCGACGAACC 61.939 63.158 0.00 0.00 0.00 3.62
1035 1054 1.737008 GTTCCTCTGGCCGACGAAC 60.737 63.158 16.76 16.76 32.95 3.95
1036 1055 2.654877 GTTCCTCTGGCCGACGAA 59.345 61.111 0.00 1.81 0.00 3.85
1037 1056 3.379445 GGTTCCTCTGGCCGACGA 61.379 66.667 0.00 0.00 0.00 4.20
1038 1057 3.019003 ATGGTTCCTCTGGCCGACG 62.019 63.158 0.00 0.00 0.00 5.12
1039 1058 1.450312 CATGGTTCCTCTGGCCGAC 60.450 63.158 0.00 0.00 0.00 4.79
1040 1059 2.989639 CATGGTTCCTCTGGCCGA 59.010 61.111 0.00 0.00 0.00 5.54
1041 1060 2.825836 GCATGGTTCCTCTGGCCG 60.826 66.667 0.00 0.00 0.00 6.13
1042 1061 2.440980 GGCATGGTTCCTCTGGCC 60.441 66.667 0.00 0.00 0.00 5.36
1043 1062 2.440980 GGGCATGGTTCCTCTGGC 60.441 66.667 0.00 8.96 34.93 4.85
1044 1063 1.077212 CTGGGCATGGTTCCTCTGG 60.077 63.158 0.00 0.00 0.00 3.86
1045 1064 1.751927 GCTGGGCATGGTTCCTCTG 60.752 63.158 0.00 0.00 0.00 3.35
1046 1065 2.679716 GCTGGGCATGGTTCCTCT 59.320 61.111 0.00 0.00 0.00 3.69
1047 1066 2.825836 CGCTGGGCATGGTTCCTC 60.826 66.667 0.00 0.00 0.00 3.71
1048 1067 4.431131 CCGCTGGGCATGGTTCCT 62.431 66.667 0.00 0.00 0.00 3.36
1098 1117 3.039588 GGCAAAGTTCGTCGGCGA 61.040 61.111 8.66 8.66 46.36 5.54
1099 1118 4.084888 GGGCAAAGTTCGTCGGCG 62.085 66.667 1.15 1.15 39.92 6.46
1100 1119 3.733960 GGGGCAAAGTTCGTCGGC 61.734 66.667 0.00 0.00 0.00 5.54
1101 1120 2.281208 TGGGGCAAAGTTCGTCGG 60.281 61.111 0.00 0.00 0.00 4.79
1102 1121 2.325082 CCTGGGGCAAAGTTCGTCG 61.325 63.158 0.00 0.00 0.00 5.12
1103 1122 1.971695 CCCTGGGGCAAAGTTCGTC 60.972 63.158 4.27 0.00 0.00 4.20
1104 1123 2.115266 CCCTGGGGCAAAGTTCGT 59.885 61.111 4.27 0.00 0.00 3.85
1105 1124 1.971695 GTCCCTGGGGCAAAGTTCG 60.972 63.158 13.71 0.00 34.68 3.95
1106 1125 1.971695 CGTCCCTGGGGCAAAGTTC 60.972 63.158 19.08 0.00 34.68 3.01
1107 1126 2.115266 CGTCCCTGGGGCAAAGTT 59.885 61.111 19.08 0.00 34.68 2.66
1108 1127 4.660938 GCGTCCCTGGGGCAAAGT 62.661 66.667 19.08 0.00 34.68 2.66
1130 1149 4.803426 CACCCGAGCTCGCAGACC 62.803 72.222 30.49 0.00 38.18 3.85
1150 1169 1.830408 CTACTGGCTCCTCCCCTCG 60.830 68.421 0.00 0.00 0.00 4.63
1151 1170 1.458588 CCTACTGGCTCCTCCCCTC 60.459 68.421 0.00 0.00 0.00 4.30
1152 1171 2.699496 CCTACTGGCTCCTCCCCT 59.301 66.667 0.00 0.00 0.00 4.79
1153 1172 2.446802 CCCTACTGGCTCCTCCCC 60.447 72.222 0.00 0.00 0.00 4.81
1154 1173 1.762858 GACCCTACTGGCTCCTCCC 60.763 68.421 0.00 0.00 37.83 4.30
1155 1174 2.128507 CGACCCTACTGGCTCCTCC 61.129 68.421 0.00 0.00 37.83 4.30
1156 1175 1.076923 TCGACCCTACTGGCTCCTC 60.077 63.158 0.00 0.00 37.83 3.71
1157 1176 1.076632 CTCGACCCTACTGGCTCCT 60.077 63.158 0.00 0.00 37.83 3.69
1158 1177 2.128507 CCTCGACCCTACTGGCTCC 61.129 68.421 0.00 0.00 37.83 4.70
1159 1178 1.076923 TCCTCGACCCTACTGGCTC 60.077 63.158 0.00 0.00 37.83 4.70
1160 1179 1.076632 CTCCTCGACCCTACTGGCT 60.077 63.158 0.00 0.00 37.83 4.75
1161 1180 2.128507 CCTCCTCGACCCTACTGGC 61.129 68.421 0.00 0.00 37.83 4.85
1162 1181 1.038130 CACCTCCTCGACCCTACTGG 61.038 65.000 0.00 0.00 41.37 4.00
1163 1182 1.038130 CCACCTCCTCGACCCTACTG 61.038 65.000 0.00 0.00 0.00 2.74
1164 1183 1.306970 CCACCTCCTCGACCCTACT 59.693 63.158 0.00 0.00 0.00 2.57
1165 1184 1.757340 CCCACCTCCTCGACCCTAC 60.757 68.421 0.00 0.00 0.00 3.18
1166 1185 2.687902 CCCACCTCCTCGACCCTA 59.312 66.667 0.00 0.00 0.00 3.53
1203 1222 3.472943 ATGCTCTCCATCGCCAGCC 62.473 63.158 0.00 0.00 0.00 4.85
1204 1223 1.960250 GATGCTCTCCATCGCCAGC 60.960 63.158 0.00 0.00 40.84 4.85
1205 1224 4.357699 GATGCTCTCCATCGCCAG 57.642 61.111 0.00 0.00 40.84 4.85
1211 1230 3.244042 AGCCTGAGATGCTCTCCAT 57.756 52.632 9.71 0.00 42.73 3.41
1212 1231 4.802947 AGCCTGAGATGCTCTCCA 57.197 55.556 9.71 0.48 42.73 3.86
1217 1236 1.220206 CAACCGAGCCTGAGATGCT 59.780 57.895 0.00 0.00 43.03 3.79
1218 1237 0.809241 CTCAACCGAGCCTGAGATGC 60.809 60.000 0.00 0.00 41.38 3.91
1219 1238 0.179089 CCTCAACCGAGCCTGAGATG 60.179 60.000 0.68 0.00 41.38 2.90
1220 1239 0.324738 TCCTCAACCGAGCCTGAGAT 60.325 55.000 0.68 0.00 41.38 2.75
1221 1240 0.967887 CTCCTCAACCGAGCCTGAGA 60.968 60.000 0.68 0.00 41.38 3.27
1222 1241 1.515020 CTCCTCAACCGAGCCTGAG 59.485 63.158 0.00 0.00 38.00 3.35
1223 1242 1.984570 CCTCCTCAACCGAGCCTGA 60.985 63.158 0.00 0.00 38.00 3.86
1224 1243 1.984570 TCCTCCTCAACCGAGCCTG 60.985 63.158 0.00 0.00 38.00 4.85
1225 1244 1.985116 GTCCTCCTCAACCGAGCCT 60.985 63.158 0.00 0.00 38.00 4.58
1226 1245 2.579738 GTCCTCCTCAACCGAGCC 59.420 66.667 0.00 0.00 38.00 4.70
1227 1246 2.182030 CGTCCTCCTCAACCGAGC 59.818 66.667 0.00 0.00 38.00 5.03
1228 1247 1.507174 GTCGTCCTCCTCAACCGAG 59.493 63.158 0.00 0.00 39.16 4.63
1229 1248 2.330372 CGTCGTCCTCCTCAACCGA 61.330 63.158 0.00 0.00 0.00 4.69
1230 1249 2.178521 CGTCGTCCTCCTCAACCG 59.821 66.667 0.00 0.00 0.00 4.44
1231 1250 2.572284 CCGTCGTCCTCCTCAACC 59.428 66.667 0.00 0.00 0.00 3.77
1232 1251 2.210341 GACCCGTCGTCCTCCTCAAC 62.210 65.000 0.00 0.00 35.23 3.18
1233 1252 1.975407 GACCCGTCGTCCTCCTCAA 60.975 63.158 0.00 0.00 35.23 3.02
1234 1253 2.360852 GACCCGTCGTCCTCCTCA 60.361 66.667 0.00 0.00 35.23 3.86
1235 1254 3.507009 CGACCCGTCGTCCTCCTC 61.507 72.222 9.06 0.00 46.99 3.71
1254 1273 4.467084 TCACGGCCATCTTCGCCC 62.467 66.667 2.24 0.00 43.98 6.13
1255 1274 2.892425 CTCACGGCCATCTTCGCC 60.892 66.667 2.24 0.00 43.38 5.54
1256 1275 3.567797 GCTCACGGCCATCTTCGC 61.568 66.667 2.24 0.00 34.27 4.70
1257 1276 2.125552 TGCTCACGGCCATCTTCG 60.126 61.111 2.24 0.00 40.92 3.79
1258 1277 1.817099 CCTGCTCACGGCCATCTTC 60.817 63.158 2.24 0.00 40.92 2.87
1259 1278 2.270205 CCTGCTCACGGCCATCTT 59.730 61.111 2.24 0.00 40.92 2.40
1260 1279 3.790437 CCCTGCTCACGGCCATCT 61.790 66.667 2.24 0.00 40.92 2.90
1261 1280 4.864334 CCCCTGCTCACGGCCATC 62.864 72.222 2.24 0.00 40.92 3.51
1264 1283 4.554036 GATCCCCTGCTCACGGCC 62.554 72.222 0.00 0.00 40.92 6.13
1265 1284 4.899239 CGATCCCCTGCTCACGGC 62.899 72.222 0.00 0.00 42.22 5.68
1266 1285 4.227134 CCGATCCCCTGCTCACGG 62.227 72.222 0.00 0.00 34.77 4.94
1267 1286 4.899239 GCCGATCCCCTGCTCACG 62.899 72.222 0.00 0.00 0.00 4.35
1268 1287 4.899239 CGCCGATCCCCTGCTCAC 62.899 72.222 0.00 0.00 0.00 3.51
1270 1289 4.292178 CTCGCCGATCCCCTGCTC 62.292 72.222 0.00 0.00 0.00 4.26
1284 1303 2.876645 GAGAACAGACGCGCCTCG 60.877 66.667 5.73 0.00 45.38 4.63
1285 1304 2.876645 CGAGAACAGACGCGCCTC 60.877 66.667 5.73 0.00 0.00 4.70
1293 1315 2.080693 GTGAGAGAGAGCGAGAACAGA 58.919 52.381 0.00 0.00 0.00 3.41
1295 1317 2.192664 AGTGAGAGAGAGCGAGAACA 57.807 50.000 0.00 0.00 0.00 3.18
1296 1318 2.415357 CCAAGTGAGAGAGAGCGAGAAC 60.415 54.545 0.00 0.00 0.00 3.01
1298 1320 1.271652 ACCAAGTGAGAGAGAGCGAGA 60.272 52.381 0.00 0.00 0.00 4.04
1299 1321 1.135431 CACCAAGTGAGAGAGAGCGAG 60.135 57.143 0.00 0.00 35.23 5.03
1302 1324 0.390998 GCCACCAAGTGAGAGAGAGC 60.391 60.000 0.00 0.00 35.23 4.09
1312 1334 3.832237 CTCCTGTGCGCCACCAAGT 62.832 63.158 4.18 0.00 32.73 3.16
1317 1339 4.767255 CTCCCTCCTGTGCGCCAC 62.767 72.222 4.18 3.72 34.56 5.01
1320 1342 3.672295 CTTCCTCCCTCCTGTGCGC 62.672 68.421 0.00 0.00 0.00 6.09
1321 1343 2.581354 CTTCCTCCCTCCTGTGCG 59.419 66.667 0.00 0.00 0.00 5.34
1322 1344 2.674220 CCCTTCCTCCCTCCTGTGC 61.674 68.421 0.00 0.00 0.00 4.57
1323 1345 0.327000 ATCCCTTCCTCCCTCCTGTG 60.327 60.000 0.00 0.00 0.00 3.66
1324 1346 0.030603 GATCCCTTCCTCCCTCCTGT 60.031 60.000 0.00 0.00 0.00 4.00
1326 1348 1.234529 CGATCCCTTCCTCCCTCCT 59.765 63.158 0.00 0.00 0.00 3.69
1327 1349 1.116536 GTCGATCCCTTCCTCCCTCC 61.117 65.000 0.00 0.00 0.00 4.30
1337 1359 2.444895 GAGCCCTGGTCGATCCCT 60.445 66.667 0.00 0.00 34.77 4.20
1390 1412 0.178900 AAACCCTCTCGTTCCCCTCT 60.179 55.000 0.00 0.00 0.00 3.69
1407 1429 0.543410 TAGCCACTCGACCCCTCAAA 60.543 55.000 0.00 0.00 0.00 2.69
1421 1443 2.942604 AACCCTCCTTACTCTAGCCA 57.057 50.000 0.00 0.00 0.00 4.75
1428 1450 1.904865 GCCCACCTAACCCTCCTTACT 60.905 57.143 0.00 0.00 0.00 2.24
1479 1501 3.894638 ACAGCCTTGCAGCCCAGT 61.895 61.111 0.00 0.00 0.00 4.00
1577 1621 0.777446 AAGAGTAGCCCCCTTGCAAA 59.223 50.000 0.00 0.00 0.00 3.68
1579 1623 1.562672 GGAAGAGTAGCCCCCTTGCA 61.563 60.000 0.00 0.00 0.00 4.08
1592 1636 5.447818 GCACATTTTTATGAGTCCGGAAGAG 60.448 44.000 5.23 0.00 0.00 2.85
1594 1638 4.396166 AGCACATTTTTATGAGTCCGGAAG 59.604 41.667 5.23 0.00 0.00 3.46
1682 1728 3.967332 CAATCTTGCCCACTCCAATTT 57.033 42.857 0.00 0.00 0.00 1.82
1695 1741 6.271488 TCCTATTCAAACCTTGCAATCTTG 57.729 37.500 0.00 4.32 0.00 3.02
1696 1742 6.494835 ACTTCCTATTCAAACCTTGCAATCTT 59.505 34.615 0.00 0.00 0.00 2.40
1697 1743 6.012745 ACTTCCTATTCAAACCTTGCAATCT 58.987 36.000 0.00 0.00 0.00 2.40
1698 1744 6.071952 TCACTTCCTATTCAAACCTTGCAATC 60.072 38.462 0.00 0.00 0.00 2.67
1699 1745 5.774690 TCACTTCCTATTCAAACCTTGCAAT 59.225 36.000 0.00 0.00 0.00 3.56
1700 1746 5.136828 TCACTTCCTATTCAAACCTTGCAA 58.863 37.500 0.00 0.00 0.00 4.08
1701 1747 4.724399 TCACTTCCTATTCAAACCTTGCA 58.276 39.130 0.00 0.00 0.00 4.08
1702 1748 4.156739 CCTCACTTCCTATTCAAACCTTGC 59.843 45.833 0.00 0.00 0.00 4.01
1703 1749 4.702131 CCCTCACTTCCTATTCAAACCTTG 59.298 45.833 0.00 0.00 0.00 3.61
1704 1750 4.354087 ACCCTCACTTCCTATTCAAACCTT 59.646 41.667 0.00 0.00 0.00 3.50
1705 1751 3.916989 ACCCTCACTTCCTATTCAAACCT 59.083 43.478 0.00 0.00 0.00 3.50
1730 1777 6.983906 AATCTCAACATTTTTGGACCTTCT 57.016 33.333 0.00 0.00 0.00 2.85
1788 1836 2.650322 TGACCTCCAAACCTTGTCAAC 58.350 47.619 0.00 0.00 33.35 3.18
1936 2002 6.156748 TCTCGGATCCATTTAAATCGAGAA 57.843 37.500 24.91 14.80 33.17 2.87
1937 2003 5.784578 TCTCGGATCCATTTAAATCGAGA 57.215 39.130 24.01 24.01 33.42 4.04
1955 2021 8.190122 TCAACCAAATAAATTGAATGGATCTCG 58.810 33.333 5.25 0.00 41.85 4.04
1956 2022 9.525409 CTCAACCAAATAAATTGAATGGATCTC 57.475 33.333 5.25 0.00 41.85 2.75
1976 2042 5.586643 TGCAACCCATTTTAAAAACTCAACC 59.413 36.000 4.44 0.00 0.00 3.77
2020 2101 6.270064 TGTTGCATTCATCATGTCATCATTC 58.730 36.000 0.00 0.00 34.98 2.67
2067 2150 1.330655 GCCTTCCATGGACTCCGAGA 61.331 60.000 15.91 0.00 0.00 4.04
2076 2159 2.022195 CACTCAAGATGCCTTCCATGG 58.978 52.381 4.97 4.97 33.29 3.66
2091 2174 3.636231 CCCCAAGACCGGCACTCA 61.636 66.667 0.00 0.00 0.00 3.41
2123 2206 7.713942 TGAACAGGATCACATCATTAGAGAATG 59.286 37.037 0.00 0.00 43.39 2.67
2124 2207 7.799081 TGAACAGGATCACATCATTAGAGAAT 58.201 34.615 0.00 0.00 0.00 2.40
2126 2209 6.796785 TGAACAGGATCACATCATTAGAGA 57.203 37.500 0.00 0.00 0.00 3.10
2127 2210 9.551734 TTAATGAACAGGATCACATCATTAGAG 57.448 33.333 15.71 0.00 41.41 2.43
2128 2211 9.904198 TTTAATGAACAGGATCACATCATTAGA 57.096 29.630 15.71 11.93 41.41 2.10
2131 2214 9.192642 TCATTTAATGAACAGGATCACATCATT 57.807 29.630 5.03 15.17 41.92 2.57
2132 2215 8.627403 GTCATTTAATGAACAGGATCACATCAT 58.373 33.333 9.39 0.00 41.69 2.45
2133 2216 7.611079 TGTCATTTAATGAACAGGATCACATCA 59.389 33.333 9.39 0.00 41.69 3.07
2134 2217 7.988737 TGTCATTTAATGAACAGGATCACATC 58.011 34.615 9.39 0.00 41.69 3.06
2135 2218 7.943079 TGTCATTTAATGAACAGGATCACAT 57.057 32.000 9.39 0.00 41.69 3.21
2136 2219 7.230309 TGTTGTCATTTAATGAACAGGATCACA 59.770 33.333 9.39 8.04 41.69 3.58
2137 2220 7.538678 GTGTTGTCATTTAATGAACAGGATCAC 59.461 37.037 9.39 12.10 41.69 3.06
2138 2221 7.230309 TGTGTTGTCATTTAATGAACAGGATCA 59.770 33.333 9.39 3.60 41.69 2.92
2139 2222 7.592938 TGTGTTGTCATTTAATGAACAGGATC 58.407 34.615 9.39 1.27 41.69 3.36
2140 2223 7.523293 TGTGTTGTCATTTAATGAACAGGAT 57.477 32.000 9.39 0.00 41.69 3.24
2141 2224 6.951062 TGTGTTGTCATTTAATGAACAGGA 57.049 33.333 9.39 0.00 41.69 3.86
2142 2225 7.147312 ACATGTGTTGTCATTTAATGAACAGG 58.853 34.615 15.84 15.84 41.69 4.00
2157 2240 3.582647 TCCTGACCATAGACATGTGTTGT 59.417 43.478 1.15 0.00 42.79 3.32
2158 2241 4.206477 TCCTGACCATAGACATGTGTTG 57.794 45.455 1.15 0.54 0.00 3.33
2159 2242 4.908601 TTCCTGACCATAGACATGTGTT 57.091 40.909 1.15 0.00 0.00 3.32
2160 2243 4.287067 AGTTTCCTGACCATAGACATGTGT 59.713 41.667 1.15 0.22 0.00 3.72
2161 2244 4.836825 AGTTTCCTGACCATAGACATGTG 58.163 43.478 1.15 0.00 0.00 3.21
2162 2245 5.505181 AAGTTTCCTGACCATAGACATGT 57.495 39.130 0.00 0.00 0.00 3.21
2163 2246 6.316390 GGTTAAGTTTCCTGACCATAGACATG 59.684 42.308 0.00 0.00 31.32 3.21
2164 2247 6.012858 TGGTTAAGTTTCCTGACCATAGACAT 60.013 38.462 0.00 0.00 34.52 3.06
2165 2248 5.308497 TGGTTAAGTTTCCTGACCATAGACA 59.692 40.000 0.00 0.00 34.52 3.41
2166 2249 5.801380 TGGTTAAGTTTCCTGACCATAGAC 58.199 41.667 0.00 0.00 34.52 2.59
2167 2250 6.443849 AGATGGTTAAGTTTCCTGACCATAGA 59.556 38.462 6.32 0.00 43.30 1.98
2168 2251 6.653989 AGATGGTTAAGTTTCCTGACCATAG 58.346 40.000 6.32 0.00 43.30 2.23
2169 2252 6.636454 AGATGGTTAAGTTTCCTGACCATA 57.364 37.500 6.32 0.00 43.30 2.74
2170 2253 5.520748 AGATGGTTAAGTTTCCTGACCAT 57.479 39.130 6.05 6.05 44.70 3.55
2171 2254 4.993705 AGATGGTTAAGTTTCCTGACCA 57.006 40.909 0.00 0.00 40.18 4.02
2172 2255 5.768164 TCAAAGATGGTTAAGTTTCCTGACC 59.232 40.000 0.00 0.00 0.00 4.02
2173 2256 6.877611 TCAAAGATGGTTAAGTTTCCTGAC 57.122 37.500 0.00 0.00 0.00 3.51
2174 2257 9.581289 TTAATCAAAGATGGTTAAGTTTCCTGA 57.419 29.630 0.00 0.00 37.24 3.86
2175 2258 9.626045 GTTAATCAAAGATGGTTAAGTTTCCTG 57.374 33.333 0.00 0.00 41.55 3.86
2176 2259 8.512138 CGTTAATCAAAGATGGTTAAGTTTCCT 58.488 33.333 0.00 0.00 41.55 3.36
2177 2260 8.508875 TCGTTAATCAAAGATGGTTAAGTTTCC 58.491 33.333 0.00 0.00 41.55 3.13
2178 2261 9.543018 CTCGTTAATCAAAGATGGTTAAGTTTC 57.457 33.333 0.00 0.00 41.55 2.78
2179 2262 8.021396 GCTCGTTAATCAAAGATGGTTAAGTTT 58.979 33.333 0.00 0.00 41.55 2.66
2180 2263 7.390718 AGCTCGTTAATCAAAGATGGTTAAGTT 59.609 33.333 0.00 0.00 41.55 2.66
2181 2264 6.879458 AGCTCGTTAATCAAAGATGGTTAAGT 59.121 34.615 0.00 0.00 41.55 2.24
2182 2265 7.308782 AGCTCGTTAATCAAAGATGGTTAAG 57.691 36.000 0.00 0.00 41.55 1.85
2183 2266 8.038944 ACTAGCTCGTTAATCAAAGATGGTTAA 58.961 33.333 0.00 0.00 39.28 2.01
2184 2267 7.553334 ACTAGCTCGTTAATCAAAGATGGTTA 58.447 34.615 0.00 0.00 30.84 2.85
2185 2268 6.407202 ACTAGCTCGTTAATCAAAGATGGTT 58.593 36.000 0.00 0.00 33.49 3.67
2186 2269 5.978814 ACTAGCTCGTTAATCAAAGATGGT 58.021 37.500 0.00 0.00 0.00 3.55
2187 2270 6.276847 AGACTAGCTCGTTAATCAAAGATGG 58.723 40.000 0.00 0.00 0.00 3.51
2188 2271 8.132362 ACTAGACTAGCTCGTTAATCAAAGATG 58.868 37.037 9.52 0.00 0.00 2.90
2189 2272 8.228035 ACTAGACTAGCTCGTTAATCAAAGAT 57.772 34.615 9.52 0.00 0.00 2.40
2190 2273 7.627298 ACTAGACTAGCTCGTTAATCAAAGA 57.373 36.000 9.52 0.00 0.00 2.52
2191 2274 8.828644 TCTACTAGACTAGCTCGTTAATCAAAG 58.171 37.037 9.52 0.00 0.00 2.77
2192 2275 8.728337 TCTACTAGACTAGCTCGTTAATCAAA 57.272 34.615 9.52 0.00 0.00 2.69
2193 2276 7.441760 CCTCTACTAGACTAGCTCGTTAATCAA 59.558 40.741 9.52 0.00 0.00 2.57
2194 2277 6.930164 CCTCTACTAGACTAGCTCGTTAATCA 59.070 42.308 9.52 0.00 0.00 2.57
2195 2278 6.128472 GCCTCTACTAGACTAGCTCGTTAATC 60.128 46.154 9.52 0.00 0.00 1.75
2196 2279 5.702209 GCCTCTACTAGACTAGCTCGTTAAT 59.298 44.000 9.52 0.00 0.00 1.40
2197 2280 5.055812 GCCTCTACTAGACTAGCTCGTTAA 58.944 45.833 9.52 0.00 0.00 2.01
2198 2281 4.100653 TGCCTCTACTAGACTAGCTCGTTA 59.899 45.833 9.52 0.00 0.00 3.18
2199 2282 3.118334 TGCCTCTACTAGACTAGCTCGTT 60.118 47.826 9.52 0.00 0.00 3.85
2200 2283 2.435069 TGCCTCTACTAGACTAGCTCGT 59.565 50.000 9.52 0.00 0.00 4.18
2201 2284 3.114668 TGCCTCTACTAGACTAGCTCG 57.885 52.381 9.52 0.00 0.00 5.03
2202 2285 5.801380 AGTATGCCTCTACTAGACTAGCTC 58.199 45.833 9.52 0.00 30.16 4.09
2203 2286 5.836024 AGTATGCCTCTACTAGACTAGCT 57.164 43.478 9.52 0.00 30.16 3.32
2204 2287 7.879160 TCTTTAGTATGCCTCTACTAGACTAGC 59.121 40.741 9.52 0.00 36.01 3.42
2205 2288 9.211485 GTCTTTAGTATGCCTCTACTAGACTAG 57.789 40.741 8.00 8.00 35.90 2.57
2206 2289 8.712103 TGTCTTTAGTATGCCTCTACTAGACTA 58.288 37.037 15.18 0.00 37.78 2.59
2207 2290 7.499895 GTGTCTTTAGTATGCCTCTACTAGACT 59.500 40.741 15.18 0.00 37.78 3.24
2208 2291 7.499895 AGTGTCTTTAGTATGCCTCTACTAGAC 59.500 40.741 0.00 10.94 37.60 2.59
2209 2292 7.575505 AGTGTCTTTAGTATGCCTCTACTAGA 58.424 38.462 0.00 0.00 36.01 2.43
2210 2293 7.717875 AGAGTGTCTTTAGTATGCCTCTACTAG 59.282 40.741 0.00 0.00 36.01 2.57
2211 2294 7.575505 AGAGTGTCTTTAGTATGCCTCTACTA 58.424 38.462 0.00 0.00 33.96 1.82
2212 2295 6.428295 AGAGTGTCTTTAGTATGCCTCTACT 58.572 40.000 0.00 0.00 36.04 2.57
2213 2296 6.702716 AGAGTGTCTTTAGTATGCCTCTAC 57.297 41.667 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.