Multiple sequence alignment - TraesCS2A01G191700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G191700 chr2A 100.000 5028 0 0 1 5028 158588752 158593779 0.000000e+00 9286.0
1 TraesCS2A01G191700 chr2A 92.315 1054 62 11 2967 4008 158554855 158555901 0.000000e+00 1480.0
2 TraesCS2A01G191700 chr2A 90.426 940 62 17 812 1732 158553154 158554084 0.000000e+00 1212.0
3 TraesCS2A01G191700 chr2A 85.128 195 23 1 1483 1677 42001376 42001564 1.430000e-45 195.0
4 TraesCS2A01G191700 chr2A 85.034 147 17 3 2791 2936 158554596 158554738 1.460000e-30 145.0
5 TraesCS2A01G191700 chr2A 88.496 113 12 1 2623 2735 158554476 158554587 8.780000e-28 135.0
6 TraesCS2A01G191700 chr2B 92.862 1583 64 23 559 2127 200382442 200383989 0.000000e+00 2252.0
7 TraesCS2A01G191700 chr2B 95.102 1123 45 7 2943 4058 200384510 200385629 0.000000e+00 1760.0
8 TraesCS2A01G191700 chr2B 92.330 1056 68 9 2960 4009 200471716 200470668 0.000000e+00 1489.0
9 TraesCS2A01G191700 chr2B 89.651 918 73 20 812 1715 200473508 200472599 0.000000e+00 1149.0
10 TraesCS2A01G191700 chr2B 89.947 378 26 9 228 598 200382053 200382425 1.270000e-130 477.0
11 TraesCS2A01G191700 chr2B 96.476 227 8 0 2507 2733 200384068 200384294 4.750000e-100 375.0
12 TraesCS2A01G191700 chr2B 91.748 206 11 3 2750 2955 200384278 200384477 1.070000e-71 281.0
13 TraesCS2A01G191700 chr2B 95.092 163 8 0 4057 4219 200385712 200385874 1.800000e-64 257.0
14 TraesCS2A01G191700 chr2B 88.393 112 11 1 2624 2735 200472133 200472024 3.160000e-27 134.0
15 TraesCS2A01G191700 chr2B 81.579 114 20 1 4253 4366 37963363 37963251 5.360000e-15 93.5
16 TraesCS2A01G191700 chr2D 95.895 1291 41 6 707 1989 142435963 142434677 0.000000e+00 2080.0
17 TraesCS2A01G191700 chr2D 95.469 1280 52 3 2943 4219 142433054 142431778 0.000000e+00 2037.0
18 TraesCS2A01G191700 chr2D 93.750 992 57 2 2959 3949 142474137 142473150 0.000000e+00 1483.0
19 TraesCS2A01G191700 chr2D 88.936 940 81 16 812 1738 142475898 142474969 0.000000e+00 1138.0
20 TraesCS2A01G191700 chr2D 89.867 375 31 4 228 598 142438577 142438206 4.550000e-130 475.0
21 TraesCS2A01G191700 chr2D 92.355 327 23 1 2126 2450 3954186 3954512 9.860000e-127 464.0
22 TraesCS2A01G191700 chr2D 97.380 229 6 0 2507 2735 142433498 142433270 1.700000e-104 390.0
23 TraesCS2A01G191700 chr2D 93.780 209 8 3 2750 2958 142433288 142433085 4.890000e-80 309.0
24 TraesCS2A01G191700 chr2D 89.286 112 12 0 2624 2735 142474551 142474440 1.890000e-29 141.0
25 TraesCS2A01G191700 chr2D 93.333 90 2 4 618 706 142436258 142436172 4.090000e-26 130.0
26 TraesCS2A01G191700 chr7A 95.006 821 27 8 4220 5028 674405290 674406108 0.000000e+00 1277.0
27 TraesCS2A01G191700 chr7A 96.046 784 21 4 4253 5028 674356746 674357527 0.000000e+00 1267.0
28 TraesCS2A01G191700 chr7A 97.273 110 3 0 124 233 685837622 685837731 2.390000e-43 187.0
29 TraesCS2A01G191700 chr7A 93.443 122 7 1 118 238 105722656 105722535 4.000000e-41 180.0
30 TraesCS2A01G191700 chr1D 92.197 346 25 2 2112 2457 399328567 399328910 5.850000e-134 488.0
31 TraesCS2A01G191700 chr5D 93.578 327 19 2 2124 2450 478596418 478596742 2.100000e-133 486.0
32 TraesCS2A01G191700 chr5D 93.769 321 20 0 2126 2446 16748998 16748678 2.720000e-132 483.0
33 TraesCS2A01G191700 chr7D 92.945 326 21 1 2125 2450 501828950 501828627 1.640000e-129 473.0
34 TraesCS2A01G191700 chr6D 92.923 325 23 0 2126 2450 327633148 327633472 1.640000e-129 473.0
35 TraesCS2A01G191700 chr6D 92.073 328 26 0 2126 2453 459281415 459281088 3.550000e-126 462.0
36 TraesCS2A01G191700 chr6D 92.969 128 7 2 107 234 307291324 307291449 8.600000e-43 185.0
37 TraesCS2A01G191700 chr5B 90.778 347 28 4 2118 2463 188021050 188020707 1.280000e-125 460.0
38 TraesCS2A01G191700 chr5B 88.793 116 13 0 4251 4366 573641231 573641116 5.250000e-30 143.0
39 TraesCS2A01G191700 chr4B 91.617 334 26 2 2122 2455 514068441 514068110 1.280000e-125 460.0
40 TraesCS2A01G191700 chr4B 86.301 365 35 8 4676 5028 590908561 590908200 2.840000e-102 383.0
41 TraesCS2A01G191700 chrUn 98.268 231 4 0 4256 4486 369340004 369339774 6.060000e-109 405.0
42 TraesCS2A01G191700 chrUn 94.872 117 6 0 124 240 94014617 94014501 3.090000e-42 183.0
43 TraesCS2A01G191700 chr6B 85.340 191 27 1 4251 4440 52638486 52638296 3.970000e-46 196.0
44 TraesCS2A01G191700 chr6A 97.273 110 3 0 123 232 579148320 579148211 2.390000e-43 187.0
45 TraesCS2A01G191700 chr6A 94.828 116 6 0 120 235 499656067 499656182 1.110000e-41 182.0
46 TraesCS2A01G191700 chr3A 95.000 120 5 1 116 235 697472455 697472337 2.390000e-43 187.0
47 TraesCS2A01G191700 chr3A 95.690 116 4 1 123 238 552620481 552620367 8.600000e-43 185.0
48 TraesCS2A01G191700 chr4A 96.429 112 4 0 123 234 274959062 274958951 8.600000e-43 185.0
49 TraesCS2A01G191700 chr1B 81.000 200 36 2 4251 4449 27556629 27556827 1.870000e-34 158.0
50 TraesCS2A01G191700 chr1B 80.000 200 38 2 4251 4449 27473634 27473436 4.060000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G191700 chr2A 158588752 158593779 5027 False 9286.000000 9286 100.000000 1 5028 1 chr2A.!!$F2 5027
1 TraesCS2A01G191700 chr2A 158553154 158555901 2747 False 743.000000 1480 89.067750 812 4008 4 chr2A.!!$F3 3196
2 TraesCS2A01G191700 chr2B 200470668 200473508 2840 True 924.000000 1489 90.124667 812 4009 3 chr2B.!!$R2 3197
3 TraesCS2A01G191700 chr2B 200382053 200385874 3821 False 900.333333 2252 93.537833 228 4219 6 chr2B.!!$F1 3991
4 TraesCS2A01G191700 chr2D 142473150 142475898 2748 True 920.666667 1483 90.657333 812 3949 3 chr2D.!!$R2 3137
5 TraesCS2A01G191700 chr2D 142431778 142438577 6799 True 903.500000 2080 94.287333 228 4219 6 chr2D.!!$R1 3991
6 TraesCS2A01G191700 chr7A 674405290 674406108 818 False 1277.000000 1277 95.006000 4220 5028 1 chr7A.!!$F2 808
7 TraesCS2A01G191700 chr7A 674356746 674357527 781 False 1267.000000 1267 96.046000 4253 5028 1 chr7A.!!$F1 775

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
139 140 0.113776 TGGTACTCCCTCCGTTCACT 59.886 55.0 0.0 0.0 0.00 3.41 F
408 411 0.391528 CATGTCGTCCTGCCACATCA 60.392 55.0 0.0 0.0 0.00 3.07 F
2010 4564 0.836400 ACATGAACCAGGACGGAGGT 60.836 55.0 0.0 0.0 40.61 3.85 F
2417 5238 0.108329 GGCACACACTATAGCACCGT 60.108 55.0 0.0 0.0 0.00 4.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1301 3495 0.325296 CAGGTAGTACTGCTCCCCCA 60.325 60.0 10.95 0.0 0.00 4.96 R
2398 5219 0.108329 ACGGTGCTATAGTGTGTGCC 60.108 55.0 0.84 0.0 0.00 5.01 R
3860 7338 0.825010 ATCCAATCAATCTGGGCCGC 60.825 55.0 0.00 0.0 34.46 6.53 R
4083 7663 0.747255 AGGGTGATGAATCTCGACCG 59.253 55.0 0.00 0.0 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.480643 ACAATTTTACATTTGTTTTCGTTCCA 57.519 26.923 0.00 0.00 32.28 3.53
27 28 8.599774 ACAATTTTACATTTGTTTTCGTTCCAG 58.400 29.630 0.00 0.00 32.28 3.86
28 29 6.576551 TTTTACATTTGTTTTCGTTCCAGC 57.423 33.333 0.00 0.00 0.00 4.85
29 30 5.508200 TTACATTTGTTTTCGTTCCAGCT 57.492 34.783 0.00 0.00 0.00 4.24
30 31 4.385358 ACATTTGTTTTCGTTCCAGCTT 57.615 36.364 0.00 0.00 0.00 3.74
32 33 5.278604 ACATTTGTTTTCGTTCCAGCTTAC 58.721 37.500 0.00 0.00 0.00 2.34
34 35 4.966965 TTGTTTTCGTTCCAGCTTACAA 57.033 36.364 0.00 0.00 0.00 2.41
36 37 5.508200 TGTTTTCGTTCCAGCTTACAAAT 57.492 34.783 0.00 0.00 0.00 2.32
37 38 5.277825 TGTTTTCGTTCCAGCTTACAAATG 58.722 37.500 0.00 0.00 0.00 2.32
38 39 5.163602 TGTTTTCGTTCCAGCTTACAAATGT 60.164 36.000 0.00 0.00 0.00 2.71
39 40 4.481930 TTCGTTCCAGCTTACAAATGTG 57.518 40.909 0.00 0.00 0.00 3.21
40 41 2.811431 TCGTTCCAGCTTACAAATGTGG 59.189 45.455 0.00 0.00 0.00 4.17
41 42 2.811431 CGTTCCAGCTTACAAATGTGGA 59.189 45.455 0.00 0.00 35.45 4.02
42 43 3.252215 CGTTCCAGCTTACAAATGTGGAA 59.748 43.478 0.00 0.00 43.47 3.53
43 44 4.261405 CGTTCCAGCTTACAAATGTGGAAA 60.261 41.667 3.74 0.00 46.31 3.13
44 45 5.222631 GTTCCAGCTTACAAATGTGGAAAG 58.777 41.667 3.74 0.00 46.31 2.62
45 46 3.255642 TCCAGCTTACAAATGTGGAAAGC 59.744 43.478 14.38 14.38 43.20 3.51
46 47 3.005684 CCAGCTTACAAATGTGGAAAGCA 59.994 43.478 20.94 0.00 44.33 3.91
47 48 4.322198 CCAGCTTACAAATGTGGAAAGCAT 60.322 41.667 20.94 8.66 44.33 3.79
48 49 5.232463 CAGCTTACAAATGTGGAAAGCATT 58.768 37.500 20.94 5.12 44.33 3.56
49 50 5.697633 CAGCTTACAAATGTGGAAAGCATTT 59.302 36.000 20.94 4.57 44.33 2.32
55 56 4.669206 AATGTGGAAAGCATTTGTCACA 57.331 36.364 8.20 8.20 45.82 3.58
56 57 4.669206 ATGTGGAAAGCATTTGTCACAA 57.331 36.364 9.32 0.00 45.31 3.33
57 58 3.779759 TGTGGAAAGCATTTGTCACAAC 58.220 40.909 0.00 0.00 42.09 3.32
58 59 2.788786 GTGGAAAGCATTTGTCACAACG 59.211 45.455 0.00 0.00 39.27 4.10
59 60 1.786579 GGAAAGCATTTGTCACAACGC 59.213 47.619 3.31 3.31 39.27 4.84
60 61 2.543653 GGAAAGCATTTGTCACAACGCT 60.544 45.455 7.67 7.67 39.27 5.07
61 62 3.304391 GGAAAGCATTTGTCACAACGCTA 60.304 43.478 12.90 0.00 39.27 4.26
62 63 3.980646 AAGCATTTGTCACAACGCTAA 57.019 38.095 12.90 0.00 0.00 3.09
63 64 3.542712 AGCATTTGTCACAACGCTAAG 57.457 42.857 11.21 0.00 0.00 2.18
64 65 2.878406 AGCATTTGTCACAACGCTAAGT 59.122 40.909 11.21 0.00 0.00 2.24
65 66 3.315191 AGCATTTGTCACAACGCTAAGTT 59.685 39.130 11.21 0.00 45.45 2.66
66 67 3.664025 GCATTTGTCACAACGCTAAGTTC 59.336 43.478 4.19 0.00 42.02 3.01
67 68 3.955771 TTTGTCACAACGCTAAGTTCC 57.044 42.857 0.00 0.00 42.02 3.62
68 69 2.605837 TGTCACAACGCTAAGTTCCA 57.394 45.000 0.00 0.00 42.02 3.53
69 70 3.120321 TGTCACAACGCTAAGTTCCAT 57.880 42.857 0.00 0.00 42.02 3.41
70 71 3.064207 TGTCACAACGCTAAGTTCCATC 58.936 45.455 0.00 0.00 42.02 3.51
71 72 3.244078 TGTCACAACGCTAAGTTCCATCT 60.244 43.478 0.00 0.00 42.02 2.90
72 73 3.123621 GTCACAACGCTAAGTTCCATCTG 59.876 47.826 0.00 0.00 42.02 2.90
73 74 3.067106 CACAACGCTAAGTTCCATCTGT 58.933 45.455 0.00 0.00 42.02 3.41
74 75 3.498397 CACAACGCTAAGTTCCATCTGTT 59.502 43.478 0.00 0.00 42.02 3.16
75 76 4.024048 CACAACGCTAAGTTCCATCTGTTT 60.024 41.667 0.00 0.00 42.02 2.83
76 77 4.578928 ACAACGCTAAGTTCCATCTGTTTT 59.421 37.500 0.00 0.00 42.02 2.43
77 78 5.147162 CAACGCTAAGTTCCATCTGTTTTC 58.853 41.667 0.00 0.00 42.02 2.29
78 79 4.385825 ACGCTAAGTTCCATCTGTTTTCA 58.614 39.130 0.00 0.00 0.00 2.69
79 80 4.213482 ACGCTAAGTTCCATCTGTTTTCAC 59.787 41.667 0.00 0.00 0.00 3.18
80 81 4.452455 CGCTAAGTTCCATCTGTTTTCACT 59.548 41.667 0.00 0.00 0.00 3.41
81 82 5.389935 CGCTAAGTTCCATCTGTTTTCACTC 60.390 44.000 0.00 0.00 0.00 3.51
82 83 5.106515 GCTAAGTTCCATCTGTTTTCACTCC 60.107 44.000 0.00 0.00 0.00 3.85
83 84 4.437682 AGTTCCATCTGTTTTCACTCCA 57.562 40.909 0.00 0.00 0.00 3.86
84 85 4.990526 AGTTCCATCTGTTTTCACTCCAT 58.009 39.130 0.00 0.00 0.00 3.41
85 86 5.388654 AGTTCCATCTGTTTTCACTCCATT 58.611 37.500 0.00 0.00 0.00 3.16
86 87 5.835280 AGTTCCATCTGTTTTCACTCCATTT 59.165 36.000 0.00 0.00 0.00 2.32
87 88 6.324770 AGTTCCATCTGTTTTCACTCCATTTT 59.675 34.615 0.00 0.00 0.00 1.82
88 89 6.331369 TCCATCTGTTTTCACTCCATTTTC 57.669 37.500 0.00 0.00 0.00 2.29
89 90 5.048782 TCCATCTGTTTTCACTCCATTTTCG 60.049 40.000 0.00 0.00 0.00 3.46
90 91 5.278463 CCATCTGTTTTCACTCCATTTTCGT 60.278 40.000 0.00 0.00 0.00 3.85
91 92 5.828299 TCTGTTTTCACTCCATTTTCGTT 57.172 34.783 0.00 0.00 0.00 3.85
92 93 5.816919 TCTGTTTTCACTCCATTTTCGTTC 58.183 37.500 0.00 0.00 0.00 3.95
93 94 4.927422 TGTTTTCACTCCATTTTCGTTCC 58.073 39.130 0.00 0.00 0.00 3.62
94 95 4.642885 TGTTTTCACTCCATTTTCGTTCCT 59.357 37.500 0.00 0.00 0.00 3.36
95 96 5.823570 TGTTTTCACTCCATTTTCGTTCCTA 59.176 36.000 0.00 0.00 0.00 2.94
96 97 6.319152 TGTTTTCACTCCATTTTCGTTCCTAA 59.681 34.615 0.00 0.00 0.00 2.69
97 98 7.013846 TGTTTTCACTCCATTTTCGTTCCTAAT 59.986 33.333 0.00 0.00 0.00 1.73
98 99 7.519032 TTTCACTCCATTTTCGTTCCTAATT 57.481 32.000 0.00 0.00 0.00 1.40
99 100 6.494893 TCACTCCATTTTCGTTCCTAATTG 57.505 37.500 0.00 0.00 0.00 2.32
100 101 6.001460 TCACTCCATTTTCGTTCCTAATTGT 58.999 36.000 0.00 0.00 0.00 2.71
101 102 7.162761 TCACTCCATTTTCGTTCCTAATTGTA 58.837 34.615 0.00 0.00 0.00 2.41
102 103 7.118680 TCACTCCATTTTCGTTCCTAATTGTAC 59.881 37.037 0.00 0.00 0.00 2.90
103 104 6.938030 ACTCCATTTTCGTTCCTAATTGTACA 59.062 34.615 0.00 0.00 0.00 2.90
104 105 7.094933 ACTCCATTTTCGTTCCTAATTGTACAC 60.095 37.037 0.00 0.00 0.00 2.90
105 106 6.019152 CCATTTTCGTTCCTAATTGTACACG 58.981 40.000 0.00 0.00 0.00 4.49
106 107 6.347888 CCATTTTCGTTCCTAATTGTACACGT 60.348 38.462 0.00 0.00 0.00 4.49
107 108 5.579384 TTTCGTTCCTAATTGTACACGTG 57.421 39.130 15.48 15.48 0.00 4.49
108 109 4.241590 TCGTTCCTAATTGTACACGTGT 57.758 40.909 26.52 26.52 0.00 4.49
109 110 3.982701 TCGTTCCTAATTGTACACGTGTG 59.017 43.478 30.83 12.03 0.00 3.82
110 111 3.737266 CGTTCCTAATTGTACACGTGTGT 59.263 43.478 30.83 10.85 46.87 3.72
111 112 4.916831 CGTTCCTAATTGTACACGTGTGTA 59.083 41.667 30.83 16.38 44.42 2.90
122 123 3.909430 ACACGTGTGTACTCACTTATGG 58.091 45.455 22.71 11.07 42.90 2.74
123 124 3.319972 ACACGTGTGTACTCACTTATGGT 59.680 43.478 22.71 11.61 42.90 3.55
124 125 4.520111 ACACGTGTGTACTCACTTATGGTA 59.480 41.667 22.71 0.00 42.90 3.25
125 126 4.855388 CACGTGTGTACTCACTTATGGTAC 59.145 45.833 21.93 0.00 44.14 3.34
126 127 4.763793 ACGTGTGTACTCACTTATGGTACT 59.236 41.667 21.93 0.00 44.14 2.73
127 128 5.106396 ACGTGTGTACTCACTTATGGTACTC 60.106 44.000 21.93 0.00 44.14 2.59
128 129 5.648572 GTGTGTACTCACTTATGGTACTCC 58.351 45.833 18.48 0.00 44.14 3.85
129 130 4.708421 TGTGTACTCACTTATGGTACTCCC 59.292 45.833 0.00 0.00 44.14 4.30
130 131 4.954826 GTGTACTCACTTATGGTACTCCCT 59.045 45.833 0.00 0.00 40.98 4.20
131 132 5.067544 GTGTACTCACTTATGGTACTCCCTC 59.932 48.000 0.00 0.00 40.98 4.30
132 133 3.644335 ACTCACTTATGGTACTCCCTCC 58.356 50.000 0.00 0.00 0.00 4.30
133 134 2.623889 CTCACTTATGGTACTCCCTCCG 59.376 54.545 0.00 0.00 0.00 4.63
134 135 2.024655 TCACTTATGGTACTCCCTCCGT 60.025 50.000 0.00 0.00 0.00 4.69
135 136 2.764572 CACTTATGGTACTCCCTCCGTT 59.235 50.000 0.00 0.00 0.00 4.44
136 137 3.029570 ACTTATGGTACTCCCTCCGTTC 58.970 50.000 0.00 0.00 0.00 3.95
137 138 2.832643 TATGGTACTCCCTCCGTTCA 57.167 50.000 0.00 0.00 0.00 3.18
138 139 1.192428 ATGGTACTCCCTCCGTTCAC 58.808 55.000 0.00 0.00 0.00 3.18
139 140 0.113776 TGGTACTCCCTCCGTTCACT 59.886 55.000 0.00 0.00 0.00 3.41
140 141 1.264295 GGTACTCCCTCCGTTCACTT 58.736 55.000 0.00 0.00 0.00 3.16
141 142 1.622312 GGTACTCCCTCCGTTCACTTT 59.378 52.381 0.00 0.00 0.00 2.66
142 143 2.038164 GGTACTCCCTCCGTTCACTTTT 59.962 50.000 0.00 0.00 0.00 2.27
143 144 2.256117 ACTCCCTCCGTTCACTTTTG 57.744 50.000 0.00 0.00 0.00 2.44
144 145 1.489230 ACTCCCTCCGTTCACTTTTGT 59.511 47.619 0.00 0.00 0.00 2.83
145 146 2.701951 ACTCCCTCCGTTCACTTTTGTA 59.298 45.455 0.00 0.00 0.00 2.41
146 147 3.135167 ACTCCCTCCGTTCACTTTTGTAA 59.865 43.478 0.00 0.00 0.00 2.41
147 148 3.735591 TCCCTCCGTTCACTTTTGTAAG 58.264 45.455 0.00 0.00 37.40 2.34
148 149 3.135167 TCCCTCCGTTCACTTTTGTAAGT 59.865 43.478 0.00 0.00 45.40 2.24
149 150 3.497262 CCCTCCGTTCACTTTTGTAAGTC 59.503 47.826 0.00 0.00 42.67 3.01
150 151 4.124238 CCTCCGTTCACTTTTGTAAGTCA 58.876 43.478 0.00 0.00 42.67 3.41
151 152 4.755123 CCTCCGTTCACTTTTGTAAGTCAT 59.245 41.667 0.00 0.00 42.67 3.06
152 153 5.238650 CCTCCGTTCACTTTTGTAAGTCATT 59.761 40.000 0.00 0.00 42.67 2.57
153 154 6.238648 CCTCCGTTCACTTTTGTAAGTCATTT 60.239 38.462 0.00 0.00 42.67 2.32
154 155 6.721321 TCCGTTCACTTTTGTAAGTCATTTC 58.279 36.000 0.00 0.00 42.67 2.17
155 156 6.316640 TCCGTTCACTTTTGTAAGTCATTTCA 59.683 34.615 0.00 0.00 42.67 2.69
156 157 6.632834 CCGTTCACTTTTGTAAGTCATTTCAG 59.367 38.462 0.00 0.00 42.67 3.02
157 158 7.406553 CGTTCACTTTTGTAAGTCATTTCAGA 58.593 34.615 0.00 0.00 42.67 3.27
158 159 7.373441 CGTTCACTTTTGTAAGTCATTTCAGAC 59.627 37.037 0.00 0.00 42.67 3.51
159 160 7.857734 TCACTTTTGTAAGTCATTTCAGACA 57.142 32.000 0.00 0.00 42.67 3.41
160 161 8.275015 TCACTTTTGTAAGTCATTTCAGACAA 57.725 30.769 0.00 0.00 42.67 3.18
161 162 8.181573 TCACTTTTGTAAGTCATTTCAGACAAC 58.818 33.333 0.00 0.00 42.67 3.32
162 163 8.184192 CACTTTTGTAAGTCATTTCAGACAACT 58.816 33.333 0.00 0.00 42.67 3.16
163 164 8.398665 ACTTTTGTAAGTCATTTCAGACAACTC 58.601 33.333 0.00 0.00 40.60 3.01
164 165 7.857734 TTTGTAAGTCATTTCAGACAACTCA 57.142 32.000 0.00 0.00 40.98 3.41
165 166 7.857734 TTGTAAGTCATTTCAGACAACTCAA 57.142 32.000 0.00 0.00 40.98 3.02
166 167 7.857734 TGTAAGTCATTTCAGACAACTCAAA 57.142 32.000 0.00 0.00 40.98 2.69
167 168 8.275015 TGTAAGTCATTTCAGACAACTCAAAA 57.725 30.769 0.00 0.00 40.98 2.44
168 169 8.902806 TGTAAGTCATTTCAGACAACTCAAAAT 58.097 29.630 0.00 0.00 40.98 1.82
169 170 9.173939 GTAAGTCATTTCAGACAACTCAAAATG 57.826 33.333 0.00 0.00 40.98 2.32
170 171 6.742109 AGTCATTTCAGACAACTCAAAATGG 58.258 36.000 0.00 0.00 40.98 3.16
171 172 5.922544 GTCATTTCAGACAACTCAAAATGGG 59.077 40.000 0.00 0.00 37.16 4.00
172 173 5.832595 TCATTTCAGACAACTCAAAATGGGA 59.167 36.000 0.00 0.00 37.16 4.37
173 174 6.494491 TCATTTCAGACAACTCAAAATGGGAT 59.506 34.615 0.00 0.00 37.16 3.85
174 175 5.710513 TTCAGACAACTCAAAATGGGATG 57.289 39.130 0.00 0.00 0.00 3.51
175 176 4.728772 TCAGACAACTCAAAATGGGATGT 58.271 39.130 0.00 0.00 0.00 3.06
176 177 5.139727 TCAGACAACTCAAAATGGGATGTT 58.860 37.500 0.00 0.00 0.00 2.71
177 178 5.598005 TCAGACAACTCAAAATGGGATGTTT 59.402 36.000 0.00 0.00 0.00 2.83
178 179 6.098124 TCAGACAACTCAAAATGGGATGTTTT 59.902 34.615 0.00 0.00 0.00 2.43
179 180 6.201425 CAGACAACTCAAAATGGGATGTTTTG 59.799 38.462 5.27 5.27 44.10 2.44
180 181 5.988287 ACAACTCAAAATGGGATGTTTTGT 58.012 33.333 10.12 0.00 43.52 2.83
181 182 7.069331 AGACAACTCAAAATGGGATGTTTTGTA 59.931 33.333 10.12 0.00 43.52 2.41
182 183 6.983890 ACAACTCAAAATGGGATGTTTTGTAC 59.016 34.615 10.12 0.00 43.52 2.90
183 184 6.723298 ACTCAAAATGGGATGTTTTGTACA 57.277 33.333 10.12 0.00 43.52 2.90
197 198 8.801715 ATGTTTTGTACATTGTCTGAAATGTC 57.198 30.769 16.13 11.24 45.47 3.06
198 199 7.995289 TGTTTTGTACATTGTCTGAAATGTCT 58.005 30.769 16.13 3.09 45.47 3.41
199 200 8.465999 TGTTTTGTACATTGTCTGAAATGTCTT 58.534 29.630 16.13 2.61 45.47 3.01
200 201 9.301153 GTTTTGTACATTGTCTGAAATGTCTTT 57.699 29.630 16.13 2.37 45.47 2.52
204 205 8.783093 TGTACATTGTCTGAAATGTCTTTAAGG 58.217 33.333 16.13 0.00 45.47 2.69
205 206 7.823745 ACATTGTCTGAAATGTCTTTAAGGT 57.176 32.000 10.41 0.00 45.47 3.50
206 207 8.237811 ACATTGTCTGAAATGTCTTTAAGGTT 57.762 30.769 10.41 0.00 45.47 3.50
207 208 8.695456 ACATTGTCTGAAATGTCTTTAAGGTTT 58.305 29.630 10.41 0.00 45.47 3.27
208 209 9.533253 CATTGTCTGAAATGTCTTTAAGGTTTT 57.467 29.630 0.00 0.00 33.65 2.43
226 227 7.761038 AGGTTTTATAAAAGTGAACAGAGGG 57.239 36.000 10.92 0.00 0.00 4.30
235 236 6.936968 AAAGTGAACAGAGGGAGTAGTATT 57.063 37.500 0.00 0.00 0.00 1.89
343 345 2.611292 GCAAGTCATACATGGCTCTCAC 59.389 50.000 0.00 0.00 42.92 3.51
347 349 3.118482 AGTCATACATGGCTCTCACAAGG 60.118 47.826 0.00 0.00 38.63 3.61
349 351 3.118629 TCATACATGGCTCTCACAAGGTC 60.119 47.826 0.00 0.00 0.00 3.85
354 356 2.851195 TGGCTCTCACAAGGTCTTTTC 58.149 47.619 0.00 0.00 0.00 2.29
384 387 3.129871 GCAAGCCACAAACTATTTTGCA 58.870 40.909 5.53 0.00 45.32 4.08
393 396 7.267128 CCACAAACTATTTTGCATATCCATGT 58.733 34.615 5.53 0.00 45.32 3.21
408 411 0.391528 CATGTCGTCCTGCCACATCA 60.392 55.000 0.00 0.00 0.00 3.07
438 441 8.972127 AGTCATACATGTCTGTCATAAGTTACT 58.028 33.333 0.00 0.00 36.79 2.24
439 442 9.239002 GTCATACATGTCTGTCATAAGTTACTC 57.761 37.037 0.00 0.00 36.79 2.59
440 443 9.190317 TCATACATGTCTGTCATAAGTTACTCT 57.810 33.333 0.00 0.00 36.79 3.24
441 444 9.809096 CATACATGTCTGTCATAAGTTACTCTT 57.191 33.333 0.00 0.00 37.21 2.85
787 2955 2.286950 GCATGAAAAGTCTTCACACGCA 60.287 45.455 0.00 0.00 0.00 5.24
965 3134 0.908198 CCTCAAGCAAGCTACCCTCT 59.092 55.000 0.00 0.00 0.00 3.69
1029 3203 2.638363 AGAAACCCCACTTCCTCTGTAC 59.362 50.000 0.00 0.00 0.00 2.90
1510 3704 3.157949 TCACCGTGGAGTGCACCA 61.158 61.111 14.63 1.72 37.68 4.17
1719 3945 4.956085 AGGCATGCATTAACTACGTATGA 58.044 39.130 21.36 0.00 0.00 2.15
1784 4035 1.677637 GGACCCTCGATCGCCTCTTT 61.678 60.000 11.09 0.00 0.00 2.52
1813 4065 6.481954 TCGTGAAAAGGAGAAGATAAAAGC 57.518 37.500 0.00 0.00 0.00 3.51
1899 4159 2.017049 GTATTGGTTGGCTAGCAGTGG 58.983 52.381 18.24 0.00 35.32 4.00
1904 4191 2.300967 TTGGCTAGCAGTGGGAGGG 61.301 63.158 18.24 0.00 0.00 4.30
1990 4277 2.941064 GGCCGGGTACTTCTTTGATAAC 59.059 50.000 2.18 0.00 0.00 1.89
1993 4280 4.571919 CCGGGTACTTCTTTGATAACACA 58.428 43.478 0.00 0.00 0.00 3.72
1995 4282 5.064707 CCGGGTACTTCTTTGATAACACATG 59.935 44.000 0.00 0.00 0.00 3.21
1996 4283 5.872617 CGGGTACTTCTTTGATAACACATGA 59.127 40.000 0.00 0.00 0.00 3.07
1997 4284 6.370442 CGGGTACTTCTTTGATAACACATGAA 59.630 38.462 0.00 0.00 0.00 2.57
1998 4285 7.527457 GGGTACTTCTTTGATAACACATGAAC 58.473 38.462 0.00 0.00 0.00 3.18
1999 4286 7.361799 GGGTACTTCTTTGATAACACATGAACC 60.362 40.741 0.00 0.00 0.00 3.62
2000 4287 7.174253 GGTACTTCTTTGATAACACATGAACCA 59.826 37.037 0.00 0.00 0.00 3.67
2001 4288 7.206981 ACTTCTTTGATAACACATGAACCAG 57.793 36.000 0.00 0.00 0.00 4.00
2010 4564 0.836400 ACATGAACCAGGACGGAGGT 60.836 55.000 0.00 0.00 40.61 3.85
2017 4571 1.064832 ACCAGGACGGAGGTAGTAGTC 60.065 57.143 0.00 0.00 36.07 2.59
2018 4572 1.297664 CAGGACGGAGGTAGTAGTCG 58.702 60.000 0.00 0.00 34.68 4.18
2020 4574 1.280421 AGGACGGAGGTAGTAGTCGTT 59.720 52.381 0.00 0.00 34.68 3.85
2021 4575 2.501723 AGGACGGAGGTAGTAGTCGTTA 59.498 50.000 0.00 0.00 34.68 3.18
2022 4576 3.055094 AGGACGGAGGTAGTAGTCGTTAA 60.055 47.826 0.00 0.00 34.68 2.01
2023 4577 3.064134 GGACGGAGGTAGTAGTCGTTAAC 59.936 52.174 0.00 0.00 34.68 2.01
2024 4578 3.935828 GACGGAGGTAGTAGTCGTTAACT 59.064 47.826 3.71 0.00 42.33 2.24
2026 4580 5.675538 ACGGAGGTAGTAGTCGTTAACTAT 58.324 41.667 3.71 0.00 42.38 2.12
2027 4581 5.755861 ACGGAGGTAGTAGTCGTTAACTATC 59.244 44.000 3.71 0.00 42.38 2.08
2028 4582 5.107683 CGGAGGTAGTAGTCGTTAACTATCG 60.108 48.000 3.71 0.00 42.38 2.92
2029 4583 5.755861 GGAGGTAGTAGTCGTTAACTATCGT 59.244 44.000 3.71 0.00 42.38 3.73
2030 4584 6.292596 GGAGGTAGTAGTCGTTAACTATCGTG 60.293 46.154 3.71 0.00 42.38 4.35
2031 4585 6.109359 AGGTAGTAGTCGTTAACTATCGTGT 58.891 40.000 3.71 0.00 42.38 4.49
2032 4586 7.265673 AGGTAGTAGTCGTTAACTATCGTGTA 58.734 38.462 3.71 0.00 42.38 2.90
2033 4587 7.222999 AGGTAGTAGTCGTTAACTATCGTGTAC 59.777 40.741 3.71 0.00 42.38 2.90
2034 4588 6.968131 AGTAGTCGTTAACTATCGTGTACA 57.032 37.500 3.71 0.00 42.38 2.90
2035 4589 6.998338 AGTAGTCGTTAACTATCGTGTACAG 58.002 40.000 3.71 0.00 42.38 2.74
2047 4601 5.557891 ATCGTGTACAGTACTACAAGGTC 57.442 43.478 12.07 0.00 29.87 3.85
2067 4888 1.581447 GCCACAGCAACCTTGTAGC 59.419 57.895 0.00 0.00 39.53 3.58
2074 4895 1.308783 GCAACCTTGTAGCCAGGAGC 61.309 60.000 0.00 0.00 44.25 4.70
2098 4919 4.080863 AGTTAATAGTTGAGGACTGGGCAG 60.081 45.833 0.00 0.00 39.48 4.85
2123 4944 3.568093 CCGAGTGGCAAGGTTTTTG 57.432 52.632 0.00 0.00 0.00 2.44
2127 4948 1.754226 GAGTGGCAAGGTTTTTGTGGA 59.246 47.619 0.00 0.00 0.00 4.02
2128 4949 2.167487 GAGTGGCAAGGTTTTTGTGGAA 59.833 45.455 0.00 0.00 0.00 3.53
2129 4950 2.771372 AGTGGCAAGGTTTTTGTGGAAT 59.229 40.909 0.00 0.00 0.00 3.01
2130 4951 3.130633 GTGGCAAGGTTTTTGTGGAATC 58.869 45.455 0.00 0.00 0.00 2.52
2131 4952 2.223923 TGGCAAGGTTTTTGTGGAATCG 60.224 45.455 0.00 0.00 0.00 3.34
2132 4953 2.403259 GCAAGGTTTTTGTGGAATCGG 58.597 47.619 0.00 0.00 0.00 4.18
2133 4954 2.035321 GCAAGGTTTTTGTGGAATCGGA 59.965 45.455 0.00 0.00 0.00 4.55
2135 4956 4.485163 CAAGGTTTTTGTGGAATCGGATC 58.515 43.478 0.00 0.00 0.00 3.36
2136 4957 3.089284 AGGTTTTTGTGGAATCGGATCC 58.911 45.455 0.00 0.00 40.10 3.36
2137 4958 3.089284 GGTTTTTGTGGAATCGGATCCT 58.911 45.455 10.75 0.00 40.35 3.24
2138 4959 3.128764 GGTTTTTGTGGAATCGGATCCTC 59.871 47.826 10.75 0.00 40.35 3.71
2139 4960 4.010349 GTTTTTGTGGAATCGGATCCTCT 58.990 43.478 10.75 0.00 40.35 3.69
2140 4961 5.183228 GTTTTTGTGGAATCGGATCCTCTA 58.817 41.667 10.75 0.00 40.35 2.43
2141 4962 5.429681 TTTTGTGGAATCGGATCCTCTAA 57.570 39.130 10.75 5.86 40.35 2.10
2142 4963 4.402056 TTGTGGAATCGGATCCTCTAAC 57.598 45.455 10.75 4.85 40.35 2.34
2143 4964 3.371034 TGTGGAATCGGATCCTCTAACA 58.629 45.455 10.75 7.21 40.35 2.41
2144 4965 3.967326 TGTGGAATCGGATCCTCTAACAT 59.033 43.478 10.75 0.00 40.35 2.71
2145 4966 4.408921 TGTGGAATCGGATCCTCTAACATT 59.591 41.667 10.75 0.00 40.35 2.71
2146 4967 4.752101 GTGGAATCGGATCCTCTAACATTG 59.248 45.833 10.75 0.00 40.35 2.82
2147 4968 4.653801 TGGAATCGGATCCTCTAACATTGA 59.346 41.667 10.75 0.00 40.35 2.57
2148 4969 5.221521 TGGAATCGGATCCTCTAACATTGAG 60.222 44.000 10.75 0.00 40.35 3.02
2149 4970 5.011125 GGAATCGGATCCTCTAACATTGAGA 59.989 44.000 10.75 0.00 36.50 3.27
2150 4971 6.463049 GGAATCGGATCCTCTAACATTGAGAA 60.463 42.308 10.75 0.00 36.50 2.87
2151 4972 5.521906 TCGGATCCTCTAACATTGAGAAG 57.478 43.478 10.75 0.00 33.68 2.85
2152 4973 4.342378 TCGGATCCTCTAACATTGAGAAGG 59.658 45.833 10.75 0.00 33.68 3.46
2153 4974 4.342378 CGGATCCTCTAACATTGAGAAGGA 59.658 45.833 10.75 0.00 33.68 3.36
2154 4975 5.163405 CGGATCCTCTAACATTGAGAAGGAA 60.163 44.000 10.75 0.00 33.68 3.36
2155 4976 6.630413 CGGATCCTCTAACATTGAGAAGGAAA 60.630 42.308 10.75 0.00 33.68 3.13
2156 4977 6.765512 GGATCCTCTAACATTGAGAAGGAAAG 59.234 42.308 3.84 0.00 33.68 2.62
2157 4978 6.688073 TCCTCTAACATTGAGAAGGAAAGT 57.312 37.500 0.00 0.00 33.68 2.66
2158 4979 7.079451 TCCTCTAACATTGAGAAGGAAAGTT 57.921 36.000 0.00 0.00 33.68 2.66
2159 4980 8.202461 TCCTCTAACATTGAGAAGGAAAGTTA 57.798 34.615 0.00 0.00 33.68 2.24
2160 4981 8.314751 TCCTCTAACATTGAGAAGGAAAGTTAG 58.685 37.037 0.00 0.00 38.67 2.34
2161 4982 8.314751 CCTCTAACATTGAGAAGGAAAGTTAGA 58.685 37.037 0.00 0.00 41.85 2.10
2162 4983 9.883142 CTCTAACATTGAGAAGGAAAGTTAGAT 57.117 33.333 11.19 0.00 42.61 1.98
2166 4987 8.499403 ACATTGAGAAGGAAAGTTAGATAAGC 57.501 34.615 0.00 0.00 0.00 3.09
2167 4988 8.325046 ACATTGAGAAGGAAAGTTAGATAAGCT 58.675 33.333 0.00 0.00 0.00 3.74
2168 4989 9.823647 CATTGAGAAGGAAAGTTAGATAAGCTA 57.176 33.333 0.00 0.00 0.00 3.32
2169 4990 9.825109 ATTGAGAAGGAAAGTTAGATAAGCTAC 57.175 33.333 0.00 0.00 0.00 3.58
2170 4991 8.362464 TGAGAAGGAAAGTTAGATAAGCTACA 57.638 34.615 0.00 0.00 0.00 2.74
2171 4992 8.812972 TGAGAAGGAAAGTTAGATAAGCTACAA 58.187 33.333 0.00 0.00 0.00 2.41
2172 4993 9.825109 GAGAAGGAAAGTTAGATAAGCTACAAT 57.175 33.333 0.00 0.00 0.00 2.71
2189 5010 8.368962 AGCTACAATACTCTAACTTTCCTTCT 57.631 34.615 0.00 0.00 0.00 2.85
2190 5011 8.817876 AGCTACAATACTCTAACTTTCCTTCTT 58.182 33.333 0.00 0.00 0.00 2.52
2191 5012 9.438228 GCTACAATACTCTAACTTTCCTTCTTT 57.562 33.333 0.00 0.00 0.00 2.52
2253 5074 9.896645 AATTTACAGATTGATGATCTACTGTGT 57.103 29.630 20.39 11.21 43.32 3.72
2255 5076 9.803315 TTTACAGATTGATGATCTACTGTGTAC 57.197 33.333 20.39 0.00 43.32 2.90
2256 5077 7.410120 ACAGATTGATGATCTACTGTGTACA 57.590 36.000 14.68 0.00 43.32 2.90
2257 5078 8.016301 ACAGATTGATGATCTACTGTGTACAT 57.984 34.615 14.68 0.00 43.32 2.29
2258 5079 8.481314 ACAGATTGATGATCTACTGTGTACATT 58.519 33.333 14.68 0.00 43.32 2.71
2259 5080 9.322773 CAGATTGATGATCTACTGTGTACATTT 57.677 33.333 0.00 0.00 43.32 2.32
2288 5109 9.834628 AGTAATTACGTACAAACAAATTGATGG 57.165 29.630 9.91 0.00 41.85 3.51
2289 5110 9.615295 GTAATTACGTACAAACAAATTGATGGT 57.385 29.630 0.00 0.00 41.85 3.55
2290 5111 8.514136 AATTACGTACAAACAAATTGATGGTG 57.486 30.769 0.00 0.00 41.85 4.17
2291 5112 5.759506 ACGTACAAACAAATTGATGGTGA 57.240 34.783 0.00 0.00 41.85 4.02
2292 5113 6.137794 ACGTACAAACAAATTGATGGTGAA 57.862 33.333 0.00 0.00 41.85 3.18
2293 5114 6.565234 ACGTACAAACAAATTGATGGTGAAA 58.435 32.000 0.00 0.00 41.85 2.69
2294 5115 7.206687 ACGTACAAACAAATTGATGGTGAAAT 58.793 30.769 0.00 0.00 41.85 2.17
2295 5116 8.353684 ACGTACAAACAAATTGATGGTGAAATA 58.646 29.630 0.00 0.00 41.85 1.40
2296 5117 9.186323 CGTACAAACAAATTGATGGTGAAATAA 57.814 29.630 0.00 0.00 41.85 1.40
2347 5168 7.933396 ACAGTAAATACCAACAGTAAACAACC 58.067 34.615 0.00 0.00 33.70 3.77
2348 5169 7.776500 ACAGTAAATACCAACAGTAAACAACCT 59.224 33.333 0.00 0.00 33.70 3.50
2349 5170 9.275398 CAGTAAATACCAACAGTAAACAACCTA 57.725 33.333 0.00 0.00 33.70 3.08
2350 5171 9.276590 AGTAAATACCAACAGTAAACAACCTAC 57.723 33.333 0.00 0.00 33.70 3.18
2351 5172 9.276590 GTAAATACCAACAGTAAACAACCTACT 57.723 33.333 0.00 0.00 33.70 2.57
2353 5174 9.850198 AAATACCAACAGTAAACAACCTACTAA 57.150 29.630 0.00 0.00 33.70 2.24
2381 5202 8.667592 ATCTACTAACAGTCCTTAACTTTCCT 57.332 34.615 0.00 0.00 35.45 3.36
2382 5203 8.488308 TCTACTAACAGTCCTTAACTTTCCTT 57.512 34.615 0.00 0.00 35.45 3.36
2383 5204 8.583296 TCTACTAACAGTCCTTAACTTTCCTTC 58.417 37.037 0.00 0.00 35.45 3.46
2384 5205 7.376335 ACTAACAGTCCTTAACTTTCCTTCT 57.624 36.000 0.00 0.00 35.45 2.85
2385 5206 7.803131 ACTAACAGTCCTTAACTTTCCTTCTT 58.197 34.615 0.00 0.00 35.45 2.52
2386 5207 8.272889 ACTAACAGTCCTTAACTTTCCTTCTTT 58.727 33.333 0.00 0.00 35.45 2.52
2387 5208 9.774413 CTAACAGTCCTTAACTTTCCTTCTTTA 57.226 33.333 0.00 0.00 35.45 1.85
2389 5210 9.642343 AACAGTCCTTAACTTTCCTTCTTTATT 57.358 29.630 0.00 0.00 35.45 1.40
2390 5211 9.642343 ACAGTCCTTAACTTTCCTTCTTTATTT 57.358 29.630 0.00 0.00 35.45 1.40
2400 5221 9.011095 ACTTTCCTTCTTTATTTTACACTAGGC 57.989 33.333 0.00 0.00 0.00 3.93
2401 5222 8.927675 TTTCCTTCTTTATTTTACACTAGGCA 57.072 30.769 0.00 0.00 0.00 4.75
2402 5223 7.916914 TCCTTCTTTATTTTACACTAGGCAC 57.083 36.000 0.00 0.00 0.00 5.01
2403 5224 7.455058 TCCTTCTTTATTTTACACTAGGCACA 58.545 34.615 0.00 0.00 0.00 4.57
2404 5225 7.389607 TCCTTCTTTATTTTACACTAGGCACAC 59.610 37.037 0.00 0.00 0.00 3.82
2405 5226 7.174253 CCTTCTTTATTTTACACTAGGCACACA 59.826 37.037 0.00 0.00 0.00 3.72
2406 5227 7.429636 TCTTTATTTTACACTAGGCACACAC 57.570 36.000 0.00 0.00 0.00 3.82
2407 5228 7.221450 TCTTTATTTTACACTAGGCACACACT 58.779 34.615 0.00 0.00 0.00 3.55
2408 5229 8.369424 TCTTTATTTTACACTAGGCACACACTA 58.631 33.333 0.00 0.00 0.00 2.74
2409 5230 9.162764 CTTTATTTTACACTAGGCACACACTAT 57.837 33.333 0.00 0.00 0.00 2.12
2411 5232 9.811995 TTATTTTACACTAGGCACACACTATAG 57.188 33.333 0.00 0.00 0.00 1.31
2412 5233 3.802948 ACACTAGGCACACACTATAGC 57.197 47.619 0.00 0.00 0.00 2.97
2413 5234 3.096852 ACACTAGGCACACACTATAGCA 58.903 45.455 0.00 0.00 0.00 3.49
2414 5235 3.119101 ACACTAGGCACACACTATAGCAC 60.119 47.826 0.00 0.00 0.00 4.40
2415 5236 2.431057 ACTAGGCACACACTATAGCACC 59.569 50.000 0.00 0.00 0.00 5.01
2416 5237 0.175760 AGGCACACACTATAGCACCG 59.824 55.000 0.00 0.00 0.00 4.94
2417 5238 0.108329 GGCACACACTATAGCACCGT 60.108 55.000 0.00 0.00 0.00 4.83
2418 5239 0.999406 GCACACACTATAGCACCGTG 59.001 55.000 0.00 5.29 34.92 4.94
2419 5240 1.403647 GCACACACTATAGCACCGTGA 60.404 52.381 15.25 0.00 33.13 4.35
2420 5241 2.259618 CACACACTATAGCACCGTGAC 58.740 52.381 15.25 0.00 33.13 3.67
2421 5242 2.094700 CACACACTATAGCACCGTGACT 60.095 50.000 15.25 1.79 33.13 3.41
2422 5243 2.561419 ACACACTATAGCACCGTGACTT 59.439 45.455 15.25 0.00 33.13 3.01
2423 5244 3.006537 ACACACTATAGCACCGTGACTTT 59.993 43.478 15.25 0.00 33.13 2.66
2424 5245 3.612860 CACACTATAGCACCGTGACTTTC 59.387 47.826 1.65 0.00 33.13 2.62
2425 5246 3.187700 CACTATAGCACCGTGACTTTCC 58.812 50.000 1.65 0.00 0.00 3.13
2426 5247 3.097614 ACTATAGCACCGTGACTTTCCT 58.902 45.455 1.65 0.00 0.00 3.36
2427 5248 3.514309 ACTATAGCACCGTGACTTTCCTT 59.486 43.478 1.65 0.00 0.00 3.36
2428 5249 2.450609 TAGCACCGTGACTTTCCTTC 57.549 50.000 1.65 0.00 0.00 3.46
2429 5250 0.468226 AGCACCGTGACTTTCCTTCA 59.532 50.000 1.65 0.00 0.00 3.02
2430 5251 0.586802 GCACCGTGACTTTCCTTCAC 59.413 55.000 1.65 0.00 40.10 3.18
2431 5252 1.948104 CACCGTGACTTTCCTTCACA 58.052 50.000 0.00 0.00 43.09 3.58
2432 5253 2.285083 CACCGTGACTTTCCTTCACAA 58.715 47.619 0.00 0.00 43.09 3.33
2433 5254 2.878406 CACCGTGACTTTCCTTCACAAT 59.122 45.455 0.00 0.00 43.09 2.71
2434 5255 2.878406 ACCGTGACTTTCCTTCACAATG 59.122 45.455 3.58 0.00 43.09 2.82
2435 5256 2.878406 CCGTGACTTTCCTTCACAATGT 59.122 45.455 3.58 0.00 43.09 2.71
2436 5257 3.315191 CCGTGACTTTCCTTCACAATGTT 59.685 43.478 3.58 0.00 43.09 2.71
2437 5258 4.513692 CCGTGACTTTCCTTCACAATGTTA 59.486 41.667 3.58 0.00 43.09 2.41
2438 5259 5.334105 CCGTGACTTTCCTTCACAATGTTAG 60.334 44.000 3.58 0.00 43.09 2.34
2439 5260 5.465390 CGTGACTTTCCTTCACAATGTTAGA 59.535 40.000 3.58 0.00 43.09 2.10
2440 5261 6.346919 CGTGACTTTCCTTCACAATGTTAGAG 60.347 42.308 3.58 0.00 43.09 2.43
2441 5262 6.706270 GTGACTTTCCTTCACAATGTTAGAGA 59.294 38.462 0.00 0.00 42.58 3.10
2442 5263 7.226720 GTGACTTTCCTTCACAATGTTAGAGAA 59.773 37.037 0.00 0.00 42.58 2.87
2443 5264 7.939039 TGACTTTCCTTCACAATGTTAGAGAAT 59.061 33.333 0.00 0.00 0.00 2.40
2444 5265 8.329203 ACTTTCCTTCACAATGTTAGAGAATC 57.671 34.615 0.00 0.00 0.00 2.52
2445 5266 7.391833 ACTTTCCTTCACAATGTTAGAGAATCC 59.608 37.037 0.00 0.00 33.66 3.01
2446 5267 5.419542 TCCTTCACAATGTTAGAGAATCCG 58.580 41.667 0.00 0.00 33.66 4.18
2447 5268 4.572389 CCTTCACAATGTTAGAGAATCCGG 59.428 45.833 0.00 0.00 33.66 5.14
2448 5269 4.819105 TCACAATGTTAGAGAATCCGGT 57.181 40.909 0.00 0.00 33.66 5.28
2449 5270 5.160607 TCACAATGTTAGAGAATCCGGTT 57.839 39.130 0.00 0.00 33.66 4.44
2450 5271 5.556915 TCACAATGTTAGAGAATCCGGTTT 58.443 37.500 0.00 0.00 33.66 3.27
2451 5272 5.642063 TCACAATGTTAGAGAATCCGGTTTC 59.358 40.000 16.10 16.10 33.66 2.78
2452 5273 4.941873 ACAATGTTAGAGAATCCGGTTTCC 59.058 41.667 19.42 12.08 33.66 3.13
2489 5310 1.067142 CGGAGTCGAATTTCTGGGTGA 60.067 52.381 0.00 0.00 39.00 4.02
2495 5316 3.309954 GTCGAATTTCTGGGTGATAGTGC 59.690 47.826 0.00 0.00 0.00 4.40
2498 5319 0.613260 TTTCTGGGTGATAGTGCGCT 59.387 50.000 9.73 4.58 0.00 5.92
2591 5861 6.407202 ACCTACTAGCACCACTTTGATAAAG 58.593 40.000 0.05 0.05 44.10 1.85
2679 6007 9.847224 CTACCTATAAATCAACCAAACCATACT 57.153 33.333 0.00 0.00 0.00 2.12
2680 6008 8.519799 ACCTATAAATCAACCAAACCATACTG 57.480 34.615 0.00 0.00 0.00 2.74
2768 6096 9.987272 TTTGAGGATATTGACAGATACTACATG 57.013 33.333 0.00 0.00 0.00 3.21
2769 6097 8.712228 TGAGGATATTGACAGATACTACATGT 57.288 34.615 2.69 2.69 0.00 3.21
2770 6098 8.797438 TGAGGATATTGACAGATACTACATGTC 58.203 37.037 0.00 0.00 42.90 3.06
2778 6106 5.284864 ACAGATACTACATGTCATTCGCTG 58.715 41.667 0.00 7.26 0.00 5.18
2791 6119 5.753438 TGTCATTCGCTGATAACTAATCCAC 59.247 40.000 0.00 0.00 35.97 4.02
2857 6189 5.863397 CACAAGATTAATCGTGCACCAAATT 59.137 36.000 25.35 11.12 39.43 1.82
2858 6190 7.026562 CACAAGATTAATCGTGCACCAAATTA 58.973 34.615 25.35 10.15 39.43 1.40
2859 6191 7.008266 CACAAGATTAATCGTGCACCAAATTAC 59.992 37.037 25.35 3.22 39.43 1.89
2888 6221 7.913789 AGTTAACCTTGATACATCCAACACTA 58.086 34.615 0.88 0.00 0.00 2.74
3188 6666 1.003839 GTGATCTCCAACCCGCACA 60.004 57.895 0.00 0.00 0.00 4.57
3503 6981 4.273257 TCGTGCTGACCAACGCGA 62.273 61.111 15.93 5.15 45.57 5.87
3505 6983 2.667318 CGTGCTGACCAACGCGATT 61.667 57.895 15.93 0.00 42.13 3.34
3664 7142 1.153939 GTCGACGCTGCTCATCACT 60.154 57.895 0.00 0.00 0.00 3.41
3665 7143 1.153958 TCGACGCTGCTCATCACTG 60.154 57.895 0.00 0.00 0.00 3.66
3860 7338 2.861286 CGCTCATGGACGAGATATGAG 58.139 52.381 14.64 14.64 46.57 2.90
3973 7469 4.314961 TCTTGTGAGTGTGCGTCATTTAT 58.685 39.130 0.00 0.00 0.00 1.40
4126 7706 2.540101 GGTTATCAACGGCTGAGATTCG 59.460 50.000 0.00 0.00 37.52 3.34
4133 7713 0.716108 CGGCTGAGATTCGTCAACAC 59.284 55.000 0.00 0.00 0.00 3.32
4134 7714 1.079503 GGCTGAGATTCGTCAACACC 58.920 55.000 0.00 0.00 0.00 4.16
4149 7729 7.778083 TCGTCAACACCTACATATCAGTTATT 58.222 34.615 0.00 0.00 0.00 1.40
4190 7770 3.441500 TGGAGACTCAAGAGCTACTCA 57.558 47.619 4.53 5.47 32.06 3.41
4219 7799 7.054491 AGTCAAAAGCATCAATAACAACCTT 57.946 32.000 0.00 0.00 0.00 3.50
4220 7800 8.177119 AGTCAAAAGCATCAATAACAACCTTA 57.823 30.769 0.00 0.00 0.00 2.69
4221 7801 8.806146 AGTCAAAAGCATCAATAACAACCTTAT 58.194 29.630 0.00 0.00 0.00 1.73
4222 7802 9.423061 GTCAAAAGCATCAATAACAACCTTATT 57.577 29.630 0.00 0.00 0.00 1.40
4298 7878 4.451096 ACAAGTTATCACGTTCATCCACAC 59.549 41.667 0.00 0.00 0.00 3.82
4359 7939 8.788325 AACGGCTAAGATTTAAAAGATGTAGT 57.212 30.769 0.00 0.00 0.00 2.73
4486 8066 6.699642 GTCCTAAACAATTTACTGCAAGCAAA 59.300 34.615 0.00 0.00 37.60 3.68
4585 8165 3.023119 TCCCACCAAATTGATCAATCCG 58.977 45.455 20.95 14.27 0.00 4.18
4593 8173 5.220931 CCAAATTGATCAATCCGGACTCTTC 60.221 44.000 20.95 2.48 0.00 2.87
4628 8209 1.053424 TAGTGGGCCAAGAACGAGTT 58.947 50.000 8.40 0.00 0.00 3.01
4643 8231 3.916761 ACGAGTTAAACTTGGACGCATA 58.083 40.909 0.00 0.00 33.85 3.14
4663 8251 7.663081 ACGCATAGAAAATTGGATGACATATCT 59.337 33.333 0.00 0.00 0.00 1.98
4664 8252 8.509690 CGCATAGAAAATTGGATGACATATCTT 58.490 33.333 0.00 0.00 0.00 2.40
4715 8303 2.158943 GGAAAAGGACTCATACGGGGAG 60.159 54.545 0.00 0.00 38.36 4.30
4716 8304 1.497161 AAAGGACTCATACGGGGAGG 58.503 55.000 5.45 0.00 36.70 4.30
4726 8314 1.797320 TACGGGGAGGATTTTCGGAT 58.203 50.000 0.00 0.00 0.00 4.18
4735 8323 6.604396 GGGGAGGATTTTCGGATAAGTAAAAA 59.396 38.462 0.00 0.00 0.00 1.94
5024 8612 4.082136 GCCTCCTAGCAGGTATACATACAC 60.082 50.000 0.57 0.00 36.53 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.582319 GCTGGAACGAAAACAAATGTAAAATTG 59.418 33.333 0.00 0.00 0.00 2.32
4 5 6.983890 AGCTGGAACGAAAACAAATGTAAAAT 59.016 30.769 0.00 0.00 0.00 1.82
10 11 5.277825 TGTAAGCTGGAACGAAAACAAATG 58.722 37.500 0.00 0.00 0.00 2.32
13 14 4.966965 TTGTAAGCTGGAACGAAAACAA 57.033 36.364 0.00 0.00 0.00 2.83
15 16 5.173131 CACATTTGTAAGCTGGAACGAAAAC 59.827 40.000 0.00 0.00 0.00 2.43
17 18 4.261405 CCACATTTGTAAGCTGGAACGAAA 60.261 41.667 0.00 0.00 0.00 3.46
19 20 2.811431 CCACATTTGTAAGCTGGAACGA 59.189 45.455 0.00 0.00 0.00 3.85
20 21 2.811431 TCCACATTTGTAAGCTGGAACG 59.189 45.455 0.00 0.00 0.00 3.95
21 22 4.846779 TTCCACATTTGTAAGCTGGAAC 57.153 40.909 0.00 0.00 0.00 3.62
23 24 3.255642 GCTTTCCACATTTGTAAGCTGGA 59.744 43.478 8.67 0.00 36.37 3.86
24 25 3.005684 TGCTTTCCACATTTGTAAGCTGG 59.994 43.478 14.44 0.00 38.43 4.85
25 26 4.241590 TGCTTTCCACATTTGTAAGCTG 57.758 40.909 14.44 0.00 38.43 4.24
26 27 5.473066 AATGCTTTCCACATTTGTAAGCT 57.527 34.783 14.44 0.00 38.43 3.74
34 35 4.669206 TGTGACAAATGCTTTCCACATT 57.331 36.364 9.51 0.00 39.38 2.71
36 37 3.733380 CGTTGTGACAAATGCTTTCCACA 60.733 43.478 0.00 9.51 33.91 4.17
37 38 2.788786 CGTTGTGACAAATGCTTTCCAC 59.211 45.455 0.00 0.00 0.00 4.02
38 39 2.797792 GCGTTGTGACAAATGCTTTCCA 60.798 45.455 14.31 0.00 38.72 3.53
39 40 1.786579 GCGTTGTGACAAATGCTTTCC 59.213 47.619 14.31 0.00 38.72 3.13
44 45 3.268013 ACTTAGCGTTGTGACAAATGC 57.732 42.857 13.88 13.88 41.48 3.56
45 46 4.219033 GGAACTTAGCGTTGTGACAAATG 58.781 43.478 0.00 0.00 35.56 2.32
46 47 3.880490 TGGAACTTAGCGTTGTGACAAAT 59.120 39.130 0.00 0.00 35.56 2.32
47 48 3.271729 TGGAACTTAGCGTTGTGACAAA 58.728 40.909 0.00 0.00 35.56 2.83
48 49 2.907634 TGGAACTTAGCGTTGTGACAA 58.092 42.857 0.00 0.00 35.56 3.18
49 50 2.605837 TGGAACTTAGCGTTGTGACA 57.394 45.000 0.00 0.00 35.56 3.58
50 51 3.123621 CAGATGGAACTTAGCGTTGTGAC 59.876 47.826 0.00 0.00 35.56 3.67
51 52 3.244078 ACAGATGGAACTTAGCGTTGTGA 60.244 43.478 0.00 0.00 35.56 3.58
52 53 3.067106 ACAGATGGAACTTAGCGTTGTG 58.933 45.455 0.00 0.00 35.56 3.33
53 54 3.402628 ACAGATGGAACTTAGCGTTGT 57.597 42.857 0.00 0.00 35.56 3.32
54 55 4.749245 AAACAGATGGAACTTAGCGTTG 57.251 40.909 0.00 0.00 35.56 4.10
55 56 4.819630 TGAAAACAGATGGAACTTAGCGTT 59.180 37.500 0.00 0.00 38.91 4.84
56 57 4.213482 GTGAAAACAGATGGAACTTAGCGT 59.787 41.667 0.00 0.00 0.00 5.07
57 58 4.452455 AGTGAAAACAGATGGAACTTAGCG 59.548 41.667 0.00 0.00 0.00 4.26
58 59 5.106515 GGAGTGAAAACAGATGGAACTTAGC 60.107 44.000 0.00 0.00 0.00 3.09
59 60 5.997746 TGGAGTGAAAACAGATGGAACTTAG 59.002 40.000 0.00 0.00 0.00 2.18
60 61 5.935945 TGGAGTGAAAACAGATGGAACTTA 58.064 37.500 0.00 0.00 0.00 2.24
61 62 4.792068 TGGAGTGAAAACAGATGGAACTT 58.208 39.130 0.00 0.00 0.00 2.66
62 63 4.437682 TGGAGTGAAAACAGATGGAACT 57.562 40.909 0.00 0.00 0.00 3.01
63 64 5.712152 AATGGAGTGAAAACAGATGGAAC 57.288 39.130 0.00 0.00 0.00 3.62
64 65 6.514870 CGAAAATGGAGTGAAAACAGATGGAA 60.515 38.462 0.00 0.00 0.00 3.53
65 66 5.048782 CGAAAATGGAGTGAAAACAGATGGA 60.049 40.000 0.00 0.00 0.00 3.41
66 67 5.156355 CGAAAATGGAGTGAAAACAGATGG 58.844 41.667 0.00 0.00 0.00 3.51
67 68 5.762045 ACGAAAATGGAGTGAAAACAGATG 58.238 37.500 0.00 0.00 0.00 2.90
68 69 6.391227 AACGAAAATGGAGTGAAAACAGAT 57.609 33.333 0.00 0.00 0.00 2.90
69 70 5.220970 GGAACGAAAATGGAGTGAAAACAGA 60.221 40.000 0.00 0.00 0.00 3.41
70 71 4.976116 GGAACGAAAATGGAGTGAAAACAG 59.024 41.667 0.00 0.00 0.00 3.16
71 72 4.642885 AGGAACGAAAATGGAGTGAAAACA 59.357 37.500 0.00 0.00 0.00 2.83
72 73 5.183014 AGGAACGAAAATGGAGTGAAAAC 57.817 39.130 0.00 0.00 0.00 2.43
73 74 6.945938 TTAGGAACGAAAATGGAGTGAAAA 57.054 33.333 0.00 0.00 0.00 2.29
74 75 7.013846 ACAATTAGGAACGAAAATGGAGTGAAA 59.986 33.333 0.00 0.00 0.00 2.69
75 76 6.488683 ACAATTAGGAACGAAAATGGAGTGAA 59.511 34.615 0.00 0.00 0.00 3.18
76 77 6.001460 ACAATTAGGAACGAAAATGGAGTGA 58.999 36.000 0.00 0.00 0.00 3.41
77 78 6.254281 ACAATTAGGAACGAAAATGGAGTG 57.746 37.500 0.00 0.00 0.00 3.51
78 79 6.938030 TGTACAATTAGGAACGAAAATGGAGT 59.062 34.615 0.00 0.00 0.00 3.85
79 80 7.241376 GTGTACAATTAGGAACGAAAATGGAG 58.759 38.462 0.00 0.00 0.00 3.86
80 81 6.128499 CGTGTACAATTAGGAACGAAAATGGA 60.128 38.462 0.00 0.00 33.03 3.41
81 82 6.019152 CGTGTACAATTAGGAACGAAAATGG 58.981 40.000 0.00 0.00 33.03 3.16
82 83 6.518395 CACGTGTACAATTAGGAACGAAAATG 59.482 38.462 7.58 0.00 35.18 2.32
83 84 6.203338 ACACGTGTACAATTAGGAACGAAAAT 59.797 34.615 21.98 0.00 35.18 1.82
84 85 5.523188 ACACGTGTACAATTAGGAACGAAAA 59.477 36.000 21.98 0.00 35.18 2.29
85 86 5.049167 ACACGTGTACAATTAGGAACGAAA 58.951 37.500 21.98 0.00 35.18 3.46
86 87 4.445052 CACACGTGTACAATTAGGAACGAA 59.555 41.667 22.90 0.00 35.18 3.85
87 88 3.982701 CACACGTGTACAATTAGGAACGA 59.017 43.478 22.90 0.00 35.18 3.85
88 89 3.737266 ACACACGTGTACAATTAGGAACG 59.263 43.478 22.90 6.57 42.90 3.95
102 103 9.888496 GGAGTACCATAAGTGAGTACACACGTG 62.888 48.148 18.91 15.48 41.46 4.49
103 104 8.009389 GGAGTACCATAAGTGAGTACACACGT 62.009 46.154 16.28 15.69 41.46 4.49
104 105 5.675575 GGAGTACCATAAGTGAGTACACACG 60.676 48.000 16.28 5.89 41.46 4.49
105 106 5.393896 GGGAGTACCATAAGTGAGTACACAC 60.394 48.000 14.77 14.77 43.41 3.82
106 107 4.708421 GGGAGTACCATAAGTGAGTACACA 59.292 45.833 0.00 0.00 43.41 3.72
107 108 4.954826 AGGGAGTACCATAAGTGAGTACAC 59.045 45.833 0.00 0.00 43.89 2.90
108 109 5.198965 GAGGGAGTACCATAAGTGAGTACA 58.801 45.833 0.00 0.00 43.89 2.90
109 110 4.583907 GGAGGGAGTACCATAAGTGAGTAC 59.416 50.000 0.00 0.00 43.89 2.73
110 111 4.688045 CGGAGGGAGTACCATAAGTGAGTA 60.688 50.000 0.00 0.00 43.89 2.59
111 112 3.644335 GGAGGGAGTACCATAAGTGAGT 58.356 50.000 0.00 0.00 43.89 3.41
112 113 2.623889 CGGAGGGAGTACCATAAGTGAG 59.376 54.545 0.00 0.00 43.89 3.51
113 114 2.024655 ACGGAGGGAGTACCATAAGTGA 60.025 50.000 0.00 0.00 43.89 3.41
114 115 2.385803 ACGGAGGGAGTACCATAAGTG 58.614 52.381 0.00 0.00 43.89 3.16
115 116 2.842645 ACGGAGGGAGTACCATAAGT 57.157 50.000 0.00 0.00 43.89 2.24
116 117 3.028850 TGAACGGAGGGAGTACCATAAG 58.971 50.000 0.00 0.00 43.89 1.73
117 118 2.762327 GTGAACGGAGGGAGTACCATAA 59.238 50.000 0.00 0.00 43.89 1.90
118 119 2.024655 AGTGAACGGAGGGAGTACCATA 60.025 50.000 0.00 0.00 43.89 2.74
119 120 1.192428 GTGAACGGAGGGAGTACCAT 58.808 55.000 0.00 0.00 43.89 3.55
120 121 0.113776 AGTGAACGGAGGGAGTACCA 59.886 55.000 0.00 0.00 43.89 3.25
121 122 1.264295 AAGTGAACGGAGGGAGTACC 58.736 55.000 0.00 0.00 40.67 3.34
122 123 3.064931 CAAAAGTGAACGGAGGGAGTAC 58.935 50.000 0.00 0.00 0.00 2.73
123 124 2.701951 ACAAAAGTGAACGGAGGGAGTA 59.298 45.455 0.00 0.00 0.00 2.59
124 125 1.489230 ACAAAAGTGAACGGAGGGAGT 59.511 47.619 0.00 0.00 0.00 3.85
125 126 2.256117 ACAAAAGTGAACGGAGGGAG 57.744 50.000 0.00 0.00 0.00 4.30
126 127 3.135167 ACTTACAAAAGTGAACGGAGGGA 59.865 43.478 0.00 0.00 44.40 4.20
127 128 3.473625 ACTTACAAAAGTGAACGGAGGG 58.526 45.455 0.00 0.00 44.40 4.30
128 129 4.124238 TGACTTACAAAAGTGAACGGAGG 58.876 43.478 0.00 0.00 46.09 4.30
129 130 5.924475 ATGACTTACAAAAGTGAACGGAG 57.076 39.130 0.00 0.00 46.09 4.63
130 131 6.316640 TGAAATGACTTACAAAAGTGAACGGA 59.683 34.615 0.00 0.00 46.09 4.69
131 132 6.491394 TGAAATGACTTACAAAAGTGAACGG 58.509 36.000 0.00 0.00 46.09 4.44
132 133 7.373441 GTCTGAAATGACTTACAAAAGTGAACG 59.627 37.037 0.00 0.00 46.09 3.95
133 134 8.181573 TGTCTGAAATGACTTACAAAAGTGAAC 58.818 33.333 0.00 0.00 46.09 3.18
134 135 8.275015 TGTCTGAAATGACTTACAAAAGTGAA 57.725 30.769 0.00 0.00 46.09 3.18
135 136 7.857734 TGTCTGAAATGACTTACAAAAGTGA 57.142 32.000 0.00 0.00 46.09 3.41
136 137 8.184192 AGTTGTCTGAAATGACTTACAAAAGTG 58.816 33.333 0.00 0.00 46.09 3.16
138 139 8.397906 TGAGTTGTCTGAAATGACTTACAAAAG 58.602 33.333 0.00 0.00 37.79 2.27
139 140 8.275015 TGAGTTGTCTGAAATGACTTACAAAA 57.725 30.769 0.00 0.00 37.79 2.44
140 141 7.857734 TGAGTTGTCTGAAATGACTTACAAA 57.142 32.000 0.00 0.00 37.79 2.83
141 142 7.857734 TTGAGTTGTCTGAAATGACTTACAA 57.142 32.000 0.00 0.00 37.79 2.41
142 143 7.857734 TTTGAGTTGTCTGAAATGACTTACA 57.142 32.000 0.00 0.00 37.79 2.41
143 144 9.173939 CATTTTGAGTTGTCTGAAATGACTTAC 57.826 33.333 0.00 0.00 38.18 2.34
144 145 8.352201 CCATTTTGAGTTGTCTGAAATGACTTA 58.648 33.333 8.27 0.00 38.18 2.24
145 146 7.205297 CCATTTTGAGTTGTCTGAAATGACTT 58.795 34.615 8.27 0.00 38.18 3.01
146 147 6.239120 CCCATTTTGAGTTGTCTGAAATGACT 60.239 38.462 8.27 0.00 38.18 3.41
147 148 5.922544 CCCATTTTGAGTTGTCTGAAATGAC 59.077 40.000 8.27 0.00 38.18 3.06
148 149 5.832595 TCCCATTTTGAGTTGTCTGAAATGA 59.167 36.000 8.27 0.00 38.18 2.57
149 150 6.088016 TCCCATTTTGAGTTGTCTGAAATG 57.912 37.500 0.00 0.00 37.04 2.32
150 151 6.268387 ACATCCCATTTTGAGTTGTCTGAAAT 59.732 34.615 0.00 0.00 0.00 2.17
151 152 5.598005 ACATCCCATTTTGAGTTGTCTGAAA 59.402 36.000 0.00 0.00 0.00 2.69
152 153 5.139727 ACATCCCATTTTGAGTTGTCTGAA 58.860 37.500 0.00 0.00 0.00 3.02
153 154 4.728772 ACATCCCATTTTGAGTTGTCTGA 58.271 39.130 0.00 0.00 0.00 3.27
154 155 5.458041 AACATCCCATTTTGAGTTGTCTG 57.542 39.130 0.00 0.00 0.00 3.51
155 156 6.127083 ACAAAACATCCCATTTTGAGTTGTCT 60.127 34.615 15.13 0.00 45.75 3.41
156 157 6.048509 ACAAAACATCCCATTTTGAGTTGTC 58.951 36.000 15.13 0.00 45.75 3.18
157 158 5.988287 ACAAAACATCCCATTTTGAGTTGT 58.012 33.333 15.13 0.00 45.75 3.32
158 159 6.983307 TGTACAAAACATCCCATTTTGAGTTG 59.017 34.615 15.13 0.00 45.75 3.16
159 160 7.118496 TGTACAAAACATCCCATTTTGAGTT 57.882 32.000 15.13 0.00 45.75 3.01
160 161 6.723298 TGTACAAAACATCCCATTTTGAGT 57.277 33.333 15.13 0.00 45.75 3.41
173 174 7.995289 AGACATTTCAGACAATGTACAAAACA 58.005 30.769 0.00 0.00 45.55 2.83
174 175 8.856490 AAGACATTTCAGACAATGTACAAAAC 57.144 30.769 0.00 0.00 45.55 2.43
178 179 8.783093 CCTTAAAGACATTTCAGACAATGTACA 58.217 33.333 0.00 0.00 45.55 2.90
179 180 8.784043 ACCTTAAAGACATTTCAGACAATGTAC 58.216 33.333 9.58 0.00 45.55 2.90
180 181 8.918202 ACCTTAAAGACATTTCAGACAATGTA 57.082 30.769 9.58 0.00 45.55 2.29
182 183 9.533253 AAAACCTTAAAGACATTTCAGACAATG 57.467 29.630 0.00 0.00 39.67 2.82
200 201 9.292195 CCCTCTGTTCACTTTTATAAAACCTTA 57.708 33.333 6.54 0.00 0.00 2.69
201 202 8.002459 TCCCTCTGTTCACTTTTATAAAACCTT 58.998 33.333 6.54 0.00 0.00 3.50
202 203 7.523415 TCCCTCTGTTCACTTTTATAAAACCT 58.477 34.615 6.54 0.00 0.00 3.50
203 204 7.447545 ACTCCCTCTGTTCACTTTTATAAAACC 59.552 37.037 6.54 0.00 0.00 3.27
204 205 8.392372 ACTCCCTCTGTTCACTTTTATAAAAC 57.608 34.615 6.54 0.00 0.00 2.43
205 206 9.720769 CTACTCCCTCTGTTCACTTTTATAAAA 57.279 33.333 10.16 10.16 0.00 1.52
206 207 8.877195 ACTACTCCCTCTGTTCACTTTTATAAA 58.123 33.333 0.00 0.00 0.00 1.40
207 208 8.431910 ACTACTCCCTCTGTTCACTTTTATAA 57.568 34.615 0.00 0.00 0.00 0.98
208 209 9.710818 ATACTACTCCCTCTGTTCACTTTTATA 57.289 33.333 0.00 0.00 0.00 0.98
209 210 6.936968 ACTACTCCCTCTGTTCACTTTTAT 57.063 37.500 0.00 0.00 0.00 1.40
210 211 8.431910 AATACTACTCCCTCTGTTCACTTTTA 57.568 34.615 0.00 0.00 0.00 1.52
211 212 6.936968 ATACTACTCCCTCTGTTCACTTTT 57.063 37.500 0.00 0.00 0.00 2.27
212 213 6.936968 AATACTACTCCCTCTGTTCACTTT 57.063 37.500 0.00 0.00 0.00 2.66
213 214 6.936968 AAATACTACTCCCTCTGTTCACTT 57.063 37.500 0.00 0.00 0.00 3.16
214 215 6.936968 AAAATACTACTCCCTCTGTTCACT 57.063 37.500 0.00 0.00 0.00 3.41
317 319 2.238144 AGCCATGTATGACTTGCTGACT 59.762 45.455 0.00 0.00 0.00 3.41
318 320 2.611292 GAGCCATGTATGACTTGCTGAC 59.389 50.000 0.00 0.00 0.00 3.51
343 345 5.947228 TGCACTAATGAGAAAAGACCTTG 57.053 39.130 0.00 0.00 0.00 3.61
347 349 4.216257 TGGCTTGCACTAATGAGAAAAGAC 59.784 41.667 0.00 0.00 0.00 3.01
349 351 4.022935 TGTGGCTTGCACTAATGAGAAAAG 60.023 41.667 0.00 0.00 0.00 2.27
354 356 3.254166 AGTTTGTGGCTTGCACTAATGAG 59.746 43.478 0.00 0.00 0.00 2.90
374 377 5.470098 GGACGACATGGATATGCAAAATAGT 59.530 40.000 0.00 0.00 37.85 2.12
379 382 3.205338 CAGGACGACATGGATATGCAAA 58.795 45.455 0.00 0.00 37.85 3.68
384 387 1.070758 GTGGCAGGACGACATGGATAT 59.929 52.381 1.26 0.00 32.69 1.63
393 396 1.204704 CTTACTGATGTGGCAGGACGA 59.795 52.381 0.00 0.00 40.20 4.20
408 411 8.972127 ACTTATGACAGACATGTATGACTTACT 58.028 33.333 26.38 2.97 40.68 2.24
461 464 2.353839 AACCCGACGACGTCAACG 60.354 61.111 26.26 18.60 46.33 4.10
466 469 1.372499 CACATGAACCCGACGACGT 60.372 57.895 0.00 0.00 37.88 4.34
468 471 2.068837 TAACACATGAACCCGACGAC 57.931 50.000 0.00 0.00 0.00 4.34
472 475 3.417101 AGCAAATAACACATGAACCCGA 58.583 40.909 0.00 0.00 0.00 5.14
627 2586 6.818644 TGCAAAAACAACTAAACCTAATGCAA 59.181 30.769 0.00 0.00 36.14 4.08
787 2955 5.901413 TGATGAGATTAATTGCTCTCCCT 57.099 39.130 13.49 4.69 37.66 4.20
891 3060 2.283173 GGGTTGGAGGGGTTGCAG 60.283 66.667 0.00 0.00 0.00 4.41
965 3134 5.702065 TGTGGGGAAGTGTTTATATAGCA 57.298 39.130 0.00 0.00 0.00 3.49
1029 3203 4.725490 TGTGGGTTTAAAGGGAGAAAGAG 58.275 43.478 0.00 0.00 0.00 2.85
1105 3285 0.796312 AATTGAGTTGGTACTGCGCG 59.204 50.000 0.00 0.00 33.84 6.86
1301 3495 0.325296 CAGGTAGTACTGCTCCCCCA 60.325 60.000 10.95 0.00 0.00 4.96
1473 3667 0.602372 GCTTCATCTCCGGGCTGATC 60.602 60.000 0.00 0.00 0.00 2.92
1719 3945 2.125106 GAAATGGAGGGCGACGCT 60.125 61.111 20.77 0.00 0.00 5.07
1784 4035 8.615878 TTATCTTCTCCTTTTCACGAAAATGA 57.384 30.769 5.47 7.53 39.29 2.57
1813 4065 2.097466 GGGAATACGTGCATCCACAAAG 59.903 50.000 15.25 0.00 42.17 2.77
1904 4191 0.391597 TCAAACCCTGTGGAGTCGAC 59.608 55.000 7.70 7.70 34.81 4.20
1990 4277 0.391661 CCTCCGTCCTGGTTCATGTG 60.392 60.000 0.00 0.00 39.52 3.21
1993 4280 1.273098 ACTACCTCCGTCCTGGTTCAT 60.273 52.381 0.00 0.00 39.52 2.57
1995 4282 2.022934 CTACTACCTCCGTCCTGGTTC 58.977 57.143 0.00 0.00 39.52 3.62
1996 4283 1.357079 ACTACTACCTCCGTCCTGGTT 59.643 52.381 0.00 0.00 39.52 3.67
1997 4284 0.998145 ACTACTACCTCCGTCCTGGT 59.002 55.000 0.00 0.00 39.52 4.00
1998 4285 1.677942 GACTACTACCTCCGTCCTGG 58.322 60.000 0.00 0.00 40.09 4.45
1999 4286 1.297664 CGACTACTACCTCCGTCCTG 58.702 60.000 0.00 0.00 0.00 3.86
2000 4287 0.908198 ACGACTACTACCTCCGTCCT 59.092 55.000 0.00 0.00 0.00 3.85
2001 4288 1.743996 AACGACTACTACCTCCGTCC 58.256 55.000 0.00 0.00 32.64 4.79
2023 4577 6.238320 GGACCTTGTAGTACTGTACACGATAG 60.238 46.154 19.27 9.54 46.19 2.08
2024 4578 5.586243 GGACCTTGTAGTACTGTACACGATA 59.414 44.000 19.27 1.11 32.53 2.92
2026 4580 3.753272 GGACCTTGTAGTACTGTACACGA 59.247 47.826 19.27 13.18 32.53 4.35
2027 4581 3.425359 CGGACCTTGTAGTACTGTACACG 60.425 52.174 19.27 0.36 32.53 4.49
2028 4582 3.671702 GCGGACCTTGTAGTACTGTACAC 60.672 52.174 19.27 14.64 32.53 2.90
2029 4583 2.489329 GCGGACCTTGTAGTACTGTACA 59.511 50.000 19.27 0.00 0.00 2.90
2030 4584 2.159324 GGCGGACCTTGTAGTACTGTAC 60.159 54.545 9.93 9.93 0.00 2.90
2031 4585 2.094675 GGCGGACCTTGTAGTACTGTA 58.905 52.381 5.39 0.00 0.00 2.74
2032 4586 0.893447 GGCGGACCTTGTAGTACTGT 59.107 55.000 5.39 0.00 0.00 3.55
2033 4587 0.892755 TGGCGGACCTTGTAGTACTG 59.107 55.000 5.39 0.00 36.63 2.74
2034 4588 0.893447 GTGGCGGACCTTGTAGTACT 59.107 55.000 0.00 0.00 36.63 2.73
2035 4589 0.604578 TGTGGCGGACCTTGTAGTAC 59.395 55.000 0.00 0.00 36.63 2.73
2047 4601 1.577328 CTACAAGGTTGCTGTGGCGG 61.577 60.000 0.00 0.00 42.25 6.13
2067 4888 4.162320 TCCTCAACTATTAACTGCTCCTGG 59.838 45.833 0.00 0.00 0.00 4.45
2074 4895 4.192317 GCCCAGTCCTCAACTATTAACTG 58.808 47.826 0.00 0.00 36.07 3.16
2078 4899 3.450904 ACTGCCCAGTCCTCAACTATTA 58.549 45.455 0.00 0.00 36.92 0.98
2081 4902 2.176889 GTACTGCCCAGTCCTCAACTA 58.823 52.381 3.88 0.00 42.54 2.24
2107 4928 1.754226 TCCACAAAAACCTTGCCACTC 59.246 47.619 0.00 0.00 0.00 3.51
2110 4931 2.223923 CGATTCCACAAAAACCTTGCCA 60.224 45.455 0.00 0.00 0.00 4.92
2120 4941 4.224147 TGTTAGAGGATCCGATTCCACAAA 59.776 41.667 5.98 0.00 38.32 2.83
2123 4944 4.608948 ATGTTAGAGGATCCGATTCCAC 57.391 45.455 5.98 0.65 38.32 4.02
2127 4948 6.463614 CCTTCTCAATGTTAGAGGATCCGATT 60.464 42.308 5.98 0.00 33.66 3.34
2128 4949 5.011533 CCTTCTCAATGTTAGAGGATCCGAT 59.988 44.000 5.98 1.10 33.66 4.18
2129 4950 4.342378 CCTTCTCAATGTTAGAGGATCCGA 59.658 45.833 5.98 0.00 33.66 4.55
2130 4951 4.342378 TCCTTCTCAATGTTAGAGGATCCG 59.658 45.833 5.98 0.00 33.66 4.18
2131 4952 5.878406 TCCTTCTCAATGTTAGAGGATCC 57.122 43.478 2.48 2.48 33.66 3.36
2132 4953 7.334858 ACTTTCCTTCTCAATGTTAGAGGATC 58.665 38.462 0.00 0.00 33.92 3.36
2133 4954 7.264294 ACTTTCCTTCTCAATGTTAGAGGAT 57.736 36.000 0.00 0.00 33.92 3.24
2135 4956 8.314751 TCTAACTTTCCTTCTCAATGTTAGAGG 58.685 37.037 13.06 0.00 41.22 3.69
2136 4957 9.883142 ATCTAACTTTCCTTCTCAATGTTAGAG 57.117 33.333 18.24 0.81 44.88 2.43
2140 4961 8.951243 GCTTATCTAACTTTCCTTCTCAATGTT 58.049 33.333 0.00 0.00 0.00 2.71
2141 4962 8.325046 AGCTTATCTAACTTTCCTTCTCAATGT 58.675 33.333 0.00 0.00 0.00 2.71
2142 4963 8.729805 AGCTTATCTAACTTTCCTTCTCAATG 57.270 34.615 0.00 0.00 0.00 2.82
2143 4964 9.825109 GTAGCTTATCTAACTTTCCTTCTCAAT 57.175 33.333 0.00 0.00 0.00 2.57
2144 4965 8.812972 TGTAGCTTATCTAACTTTCCTTCTCAA 58.187 33.333 0.00 0.00 0.00 3.02
2145 4966 8.362464 TGTAGCTTATCTAACTTTCCTTCTCA 57.638 34.615 0.00 0.00 0.00 3.27
2146 4967 9.825109 ATTGTAGCTTATCTAACTTTCCTTCTC 57.175 33.333 0.00 0.00 0.00 2.87
2163 4984 8.817876 AGAAGGAAAGTTAGAGTATTGTAGCTT 58.182 33.333 0.00 0.00 0.00 3.74
2164 4985 8.368962 AGAAGGAAAGTTAGAGTATTGTAGCT 57.631 34.615 0.00 0.00 0.00 3.32
2165 4986 9.438228 AAAGAAGGAAAGTTAGAGTATTGTAGC 57.562 33.333 0.00 0.00 0.00 3.58
2227 5048 9.896645 ACACAGTAGATCATCAATCTGTAAATT 57.103 29.630 8.40 0.00 44.69 1.82
2229 5050 9.803315 GTACACAGTAGATCATCAATCTGTAAA 57.197 33.333 8.40 0.45 44.69 2.01
2230 5051 8.966868 TGTACACAGTAGATCATCAATCTGTAA 58.033 33.333 8.40 0.71 44.69 2.41
2231 5052 8.519799 TGTACACAGTAGATCATCAATCTGTA 57.480 34.615 8.40 0.00 44.69 2.74
2232 5053 7.410120 TGTACACAGTAGATCATCAATCTGT 57.590 36.000 0.00 4.32 44.69 3.41
2233 5054 8.883954 AATGTACACAGTAGATCATCAATCTG 57.116 34.615 0.00 0.00 44.69 2.90
2262 5083 9.834628 CCATCAATTTGTTTGTACGTAATTACT 57.165 29.630 13.56 3.86 36.65 2.24
2263 5084 9.615295 ACCATCAATTTGTTTGTACGTAATTAC 57.385 29.630 5.47 5.47 36.65 1.89
2264 5085 9.613957 CACCATCAATTTGTTTGTACGTAATTA 57.386 29.630 0.00 0.00 36.65 1.40
2265 5086 8.353684 TCACCATCAATTTGTTTGTACGTAATT 58.646 29.630 0.00 0.00 36.65 1.40
2266 5087 7.877003 TCACCATCAATTTGTTTGTACGTAAT 58.123 30.769 0.00 0.00 36.65 1.89
2267 5088 7.260558 TCACCATCAATTTGTTTGTACGTAA 57.739 32.000 0.00 0.00 36.65 3.18
2268 5089 6.862711 TCACCATCAATTTGTTTGTACGTA 57.137 33.333 0.00 0.00 36.65 3.57
2269 5090 5.759506 TCACCATCAATTTGTTTGTACGT 57.240 34.783 0.00 0.00 36.65 3.57
2270 5091 7.636259 ATTTCACCATCAATTTGTTTGTACG 57.364 32.000 0.00 0.00 36.65 3.67
2321 5142 9.054922 GGTTGTTTACTGTTGGTATTTACTGTA 57.945 33.333 0.00 0.00 0.00 2.74
2322 5143 7.776500 AGGTTGTTTACTGTTGGTATTTACTGT 59.224 33.333 0.00 0.00 0.00 3.55
2323 5144 8.161699 AGGTTGTTTACTGTTGGTATTTACTG 57.838 34.615 0.00 0.00 0.00 2.74
2324 5145 9.276590 GTAGGTTGTTTACTGTTGGTATTTACT 57.723 33.333 0.00 0.00 0.00 2.24
2325 5146 9.276590 AGTAGGTTGTTTACTGTTGGTATTTAC 57.723 33.333 0.00 0.00 30.46 2.01
2327 5148 9.850198 TTAGTAGGTTGTTTACTGTTGGTATTT 57.150 29.630 0.00 0.00 33.60 1.40
2355 5176 9.765295 AGGAAAGTTAAGGACTGTTAGTAGATA 57.235 33.333 0.00 0.00 39.00 1.98
2356 5177 8.667592 AGGAAAGTTAAGGACTGTTAGTAGAT 57.332 34.615 0.00 0.00 39.00 1.98
2357 5178 8.488308 AAGGAAAGTTAAGGACTGTTAGTAGA 57.512 34.615 0.00 0.00 39.00 2.59
2358 5179 8.586744 AGAAGGAAAGTTAAGGACTGTTAGTAG 58.413 37.037 0.00 0.00 39.00 2.57
2359 5180 8.488308 AGAAGGAAAGTTAAGGACTGTTAGTA 57.512 34.615 0.00 0.00 39.00 1.82
2360 5181 7.376335 AGAAGGAAAGTTAAGGACTGTTAGT 57.624 36.000 0.00 0.00 39.00 2.24
2361 5182 8.678593 AAAGAAGGAAAGTTAAGGACTGTTAG 57.321 34.615 0.00 0.00 39.00 2.34
2363 5184 9.642343 AATAAAGAAGGAAAGTTAAGGACTGTT 57.358 29.630 0.00 0.00 39.00 3.16
2364 5185 9.642343 AAATAAAGAAGGAAAGTTAAGGACTGT 57.358 29.630 0.00 0.00 39.00 3.55
2374 5195 9.011095 GCCTAGTGTAAAATAAAGAAGGAAAGT 57.989 33.333 0.00 0.00 0.00 2.66
2375 5196 9.010029 TGCCTAGTGTAAAATAAAGAAGGAAAG 57.990 33.333 0.00 0.00 0.00 2.62
2376 5197 8.789762 GTGCCTAGTGTAAAATAAAGAAGGAAA 58.210 33.333 0.00 0.00 0.00 3.13
2377 5198 7.940137 TGTGCCTAGTGTAAAATAAAGAAGGAA 59.060 33.333 0.00 0.00 0.00 3.36
2378 5199 7.389607 GTGTGCCTAGTGTAAAATAAAGAAGGA 59.610 37.037 0.00 0.00 0.00 3.36
2379 5200 7.174253 TGTGTGCCTAGTGTAAAATAAAGAAGG 59.826 37.037 0.00 0.00 0.00 3.46
2380 5201 8.015658 GTGTGTGCCTAGTGTAAAATAAAGAAG 58.984 37.037 0.00 0.00 0.00 2.85
2381 5202 7.717875 AGTGTGTGCCTAGTGTAAAATAAAGAA 59.282 33.333 0.00 0.00 0.00 2.52
2382 5203 7.221450 AGTGTGTGCCTAGTGTAAAATAAAGA 58.779 34.615 0.00 0.00 0.00 2.52
2383 5204 7.435068 AGTGTGTGCCTAGTGTAAAATAAAG 57.565 36.000 0.00 0.00 0.00 1.85
2385 5206 9.811995 CTATAGTGTGTGCCTAGTGTAAAATAA 57.188 33.333 0.00 0.00 0.00 1.40
2386 5207 7.924412 GCTATAGTGTGTGCCTAGTGTAAAATA 59.076 37.037 0.84 0.00 0.00 1.40
2387 5208 6.761714 GCTATAGTGTGTGCCTAGTGTAAAAT 59.238 38.462 0.84 0.00 0.00 1.82
2388 5209 6.103997 GCTATAGTGTGTGCCTAGTGTAAAA 58.896 40.000 0.84 0.00 0.00 1.52
2389 5210 5.186215 TGCTATAGTGTGTGCCTAGTGTAAA 59.814 40.000 0.84 0.00 0.00 2.01
2390 5211 4.707934 TGCTATAGTGTGTGCCTAGTGTAA 59.292 41.667 0.84 0.00 0.00 2.41
2391 5212 4.097437 GTGCTATAGTGTGTGCCTAGTGTA 59.903 45.833 0.84 0.00 0.00 2.90
2392 5213 3.096852 TGCTATAGTGTGTGCCTAGTGT 58.903 45.455 0.84 0.00 0.00 3.55
2393 5214 3.448686 GTGCTATAGTGTGTGCCTAGTG 58.551 50.000 0.84 0.00 0.00 2.74
2394 5215 2.431057 GGTGCTATAGTGTGTGCCTAGT 59.569 50.000 0.84 0.00 0.00 2.57
2395 5216 2.543861 CGGTGCTATAGTGTGTGCCTAG 60.544 54.545 0.84 0.00 0.00 3.02
2396 5217 1.407618 CGGTGCTATAGTGTGTGCCTA 59.592 52.381 0.84 0.00 0.00 3.93
2397 5218 0.175760 CGGTGCTATAGTGTGTGCCT 59.824 55.000 0.84 0.00 0.00 4.75
2398 5219 0.108329 ACGGTGCTATAGTGTGTGCC 60.108 55.000 0.84 0.00 0.00 5.01
2399 5220 0.999406 CACGGTGCTATAGTGTGTGC 59.001 55.000 0.84 0.00 0.00 4.57
2400 5221 2.094700 AGTCACGGTGCTATAGTGTGTG 60.095 50.000 2.51 6.01 37.20 3.82
2401 5222 2.168496 AGTCACGGTGCTATAGTGTGT 58.832 47.619 2.51 0.00 37.20 3.72
2402 5223 2.941453 AGTCACGGTGCTATAGTGTG 57.059 50.000 2.51 6.02 37.20 3.82
2403 5224 3.368116 GGAAAGTCACGGTGCTATAGTGT 60.368 47.826 2.51 0.00 37.20 3.55
2404 5225 3.119101 AGGAAAGTCACGGTGCTATAGTG 60.119 47.826 2.51 0.00 37.24 2.74
2405 5226 3.097614 AGGAAAGTCACGGTGCTATAGT 58.902 45.455 2.51 0.00 0.00 2.12
2406 5227 3.802948 AGGAAAGTCACGGTGCTATAG 57.197 47.619 2.51 0.00 0.00 1.31
2407 5228 3.512329 TGAAGGAAAGTCACGGTGCTATA 59.488 43.478 2.51 0.00 0.00 1.31
2408 5229 2.301870 TGAAGGAAAGTCACGGTGCTAT 59.698 45.455 2.51 0.00 0.00 2.97
2409 5230 1.689813 TGAAGGAAAGTCACGGTGCTA 59.310 47.619 2.51 0.00 0.00 3.49
2410 5231 0.468226 TGAAGGAAAGTCACGGTGCT 59.532 50.000 2.51 1.17 0.00 4.40
2411 5232 0.586802 GTGAAGGAAAGTCACGGTGC 59.413 55.000 2.51 0.00 36.35 5.01
2412 5233 1.948104 TGTGAAGGAAAGTCACGGTG 58.052 50.000 0.56 0.56 46.89 4.94
2413 5234 2.702592 TTGTGAAGGAAAGTCACGGT 57.297 45.000 0.57 0.00 46.89 4.83
2414 5235 2.878406 ACATTGTGAAGGAAAGTCACGG 59.122 45.455 0.00 0.00 46.89 4.94
2415 5236 4.552166 AACATTGTGAAGGAAAGTCACG 57.448 40.909 0.00 0.00 46.89 4.35
2416 5237 6.706270 TCTCTAACATTGTGAAGGAAAGTCAC 59.294 38.462 0.00 0.00 44.67 3.67
2417 5238 6.826668 TCTCTAACATTGTGAAGGAAAGTCA 58.173 36.000 0.00 0.00 0.00 3.41
2418 5239 7.730364 TTCTCTAACATTGTGAAGGAAAGTC 57.270 36.000 0.00 0.00 0.00 3.01
2419 5240 7.391833 GGATTCTCTAACATTGTGAAGGAAAGT 59.608 37.037 0.00 0.00 0.00 2.66
2420 5241 7.413438 CGGATTCTCTAACATTGTGAAGGAAAG 60.413 40.741 0.00 0.00 0.00 2.62
2421 5242 6.371548 CGGATTCTCTAACATTGTGAAGGAAA 59.628 38.462 0.00 0.00 0.00 3.13
2422 5243 5.874810 CGGATTCTCTAACATTGTGAAGGAA 59.125 40.000 0.00 0.00 0.00 3.36
2423 5244 5.419542 CGGATTCTCTAACATTGTGAAGGA 58.580 41.667 0.00 0.00 0.00 3.36
2424 5245 4.572389 CCGGATTCTCTAACATTGTGAAGG 59.428 45.833 0.00 0.00 0.00 3.46
2425 5246 5.178797 ACCGGATTCTCTAACATTGTGAAG 58.821 41.667 9.46 0.00 0.00 3.02
2426 5247 5.160607 ACCGGATTCTCTAACATTGTGAA 57.839 39.130 9.46 0.00 0.00 3.18
2427 5248 4.819105 ACCGGATTCTCTAACATTGTGA 57.181 40.909 9.46 0.00 0.00 3.58
2428 5249 5.163754 GGAAACCGGATTCTCTAACATTGTG 60.164 44.000 22.08 0.00 0.00 3.33
2429 5250 4.941873 GGAAACCGGATTCTCTAACATTGT 59.058 41.667 22.08 0.00 0.00 2.71
2430 5251 4.034048 CGGAAACCGGATTCTCTAACATTG 59.966 45.833 22.08 0.66 44.15 2.82
2431 5252 4.189231 CGGAAACCGGATTCTCTAACATT 58.811 43.478 22.08 0.00 44.15 2.71
2432 5253 3.793559 CGGAAACCGGATTCTCTAACAT 58.206 45.455 22.08 0.00 44.15 2.71
2433 5254 3.241067 CGGAAACCGGATTCTCTAACA 57.759 47.619 22.08 0.00 44.15 2.41
2456 5277 1.874739 CGACTCCGGCTACCACAAAAA 60.875 52.381 0.00 0.00 0.00 1.94
2457 5278 0.320073 CGACTCCGGCTACCACAAAA 60.320 55.000 0.00 0.00 0.00 2.44
2458 5279 1.180456 TCGACTCCGGCTACCACAAA 61.180 55.000 0.00 0.00 36.24 2.83
2459 5280 1.180456 TTCGACTCCGGCTACCACAA 61.180 55.000 0.00 0.00 36.24 3.33
2460 5281 0.968901 ATTCGACTCCGGCTACCACA 60.969 55.000 0.00 0.00 36.24 4.17
2461 5282 0.175073 AATTCGACTCCGGCTACCAC 59.825 55.000 0.00 0.00 36.24 4.16
2462 5283 0.899720 AAATTCGACTCCGGCTACCA 59.100 50.000 0.00 0.00 36.24 3.25
2463 5284 1.136500 AGAAATTCGACTCCGGCTACC 59.864 52.381 0.00 0.00 36.24 3.18
2464 5285 2.194271 CAGAAATTCGACTCCGGCTAC 58.806 52.381 0.00 0.00 36.24 3.58
2465 5286 1.136305 CCAGAAATTCGACTCCGGCTA 59.864 52.381 0.00 0.00 36.24 3.93
2468 5289 0.249398 ACCCAGAAATTCGACTCCGG 59.751 55.000 0.00 0.00 36.24 5.14
2472 5293 4.759782 CACTATCACCCAGAAATTCGACT 58.240 43.478 0.00 0.00 0.00 4.18
2474 5295 3.531538 GCACTATCACCCAGAAATTCGA 58.468 45.455 0.00 0.00 0.00 3.71
2489 5310 4.516698 CCTTAAAATCCATGAGCGCACTAT 59.483 41.667 11.47 0.00 0.00 2.12
2495 5316 4.157656 TCAAACCCTTAAAATCCATGAGCG 59.842 41.667 0.00 0.00 0.00 5.03
2612 5882 9.793259 ACAATGGAGTACTAAAGAAATCTTTGA 57.207 29.630 16.64 1.85 45.01 2.69
2679 6007 4.391216 TCGACAACTAAAACAAAACGGACA 59.609 37.500 0.00 0.00 0.00 4.02
2680 6008 4.896080 TCGACAACTAAAACAAAACGGAC 58.104 39.130 0.00 0.00 0.00 4.79
2742 6070 9.987272 CATGTAGTATCTGTCAATATCCTCAAA 57.013 33.333 0.00 0.00 0.00 2.69
2743 6071 9.147732 ACATGTAGTATCTGTCAATATCCTCAA 57.852 33.333 0.00 0.00 0.00 3.02
2744 6072 8.712228 ACATGTAGTATCTGTCAATATCCTCA 57.288 34.615 0.00 0.00 0.00 3.86
2745 6073 8.797438 TGACATGTAGTATCTGTCAATATCCTC 58.203 37.037 12.72 0.00 44.51 3.71
2746 6074 8.712228 TGACATGTAGTATCTGTCAATATCCT 57.288 34.615 12.72 0.00 44.51 3.24
2754 6082 5.400782 CAGCGAATGACATGTAGTATCTGTC 59.599 44.000 0.00 7.69 39.74 3.51
2755 6083 5.067805 TCAGCGAATGACATGTAGTATCTGT 59.932 40.000 0.00 0.00 31.12 3.41
2756 6084 5.523369 TCAGCGAATGACATGTAGTATCTG 58.477 41.667 0.00 2.89 31.12 2.90
2757 6085 5.774498 TCAGCGAATGACATGTAGTATCT 57.226 39.130 0.00 0.00 31.12 1.98
2758 6086 7.810282 AGTTATCAGCGAATGACATGTAGTATC 59.190 37.037 0.00 0.00 41.91 2.24
2759 6087 7.661968 AGTTATCAGCGAATGACATGTAGTAT 58.338 34.615 0.00 0.00 41.91 2.12
2760 6088 7.039313 AGTTATCAGCGAATGACATGTAGTA 57.961 36.000 0.00 0.00 41.91 1.82
2761 6089 5.907207 AGTTATCAGCGAATGACATGTAGT 58.093 37.500 0.00 0.00 41.91 2.73
2762 6090 7.930513 TTAGTTATCAGCGAATGACATGTAG 57.069 36.000 0.00 0.00 41.91 2.74
2763 6091 7.598869 GGATTAGTTATCAGCGAATGACATGTA 59.401 37.037 0.00 0.00 41.91 2.29
2764 6092 6.425114 GGATTAGTTATCAGCGAATGACATGT 59.575 38.462 0.00 0.00 41.91 3.21
2765 6093 6.424812 TGGATTAGTTATCAGCGAATGACATG 59.575 38.462 0.00 0.00 41.91 3.21
2766 6094 6.425114 GTGGATTAGTTATCAGCGAATGACAT 59.575 38.462 0.00 0.00 41.91 3.06
2767 6095 5.753438 GTGGATTAGTTATCAGCGAATGACA 59.247 40.000 0.00 0.00 41.91 3.58
2768 6096 5.986135 AGTGGATTAGTTATCAGCGAATGAC 59.014 40.000 0.00 0.00 41.91 3.06
2769 6097 6.161855 AGTGGATTAGTTATCAGCGAATGA 57.838 37.500 0.00 0.00 43.70 2.57
2770 6098 5.985530 TGAGTGGATTAGTTATCAGCGAATG 59.014 40.000 0.00 0.00 34.77 2.67
2778 6106 7.716998 ACATGTTGGATGAGTGGATTAGTTATC 59.283 37.037 0.00 0.00 0.00 1.75
2857 6189 8.598202 TGGATGTATCAAGGTTAACTACTGTA 57.402 34.615 5.42 0.00 0.00 2.74
2858 6190 7.490657 TGGATGTATCAAGGTTAACTACTGT 57.509 36.000 5.42 0.00 0.00 3.55
2859 6191 7.822334 TGTTGGATGTATCAAGGTTAACTACTG 59.178 37.037 5.42 1.07 0.00 2.74
2888 6221 3.735746 GCAGCAGCGTTTTGACTAATTTT 59.264 39.130 0.00 0.00 0.00 1.82
2938 6271 9.498307 AAATTTCTACAACTCAAAGTACAAACG 57.502 29.630 0.00 0.00 0.00 3.60
3445 6923 1.204786 TTGGGAGCGGAGGGATGAAA 61.205 55.000 0.00 0.00 0.00 2.69
3449 6927 2.378634 CCTTTGGGAGCGGAGGGAT 61.379 63.158 0.00 0.00 33.58 3.85
3514 6992 2.780094 CGCCGACAGCAGATCCTCT 61.780 63.158 0.00 0.00 44.04 3.69
3516 6994 4.521062 GCGCCGACAGCAGATCCT 62.521 66.667 0.00 0.00 44.04 3.24
3840 7318 2.861286 CTCATATCTCGTCCATGAGCG 58.139 52.381 0.00 0.00 39.29 5.03
3860 7338 0.825010 ATCCAATCAATCTGGGCCGC 60.825 55.000 0.00 0.00 34.46 6.53
3890 7368 6.526222 GCATAATAACAGTGTATAAGCGCTC 58.474 40.000 12.06 0.00 0.00 5.03
4083 7663 0.747255 AGGGTGATGAATCTCGACCG 59.253 55.000 0.00 0.00 0.00 4.79
4087 7667 4.408182 AACCTTAGGGTGATGAATCTCG 57.592 45.455 2.32 0.00 46.67 4.04
4126 7706 8.942338 TCAATAACTGATATGTAGGTGTTGAC 57.058 34.615 8.73 0.00 37.83 3.18
4133 7713 5.864474 GGACGCTCAATAACTGATATGTAGG 59.136 44.000 0.00 0.00 32.14 3.18
4134 7714 6.682746 AGGACGCTCAATAACTGATATGTAG 58.317 40.000 0.00 0.00 32.14 2.74
4149 7729 4.635765 CCATAATTCTTTGAAGGACGCTCA 59.364 41.667 0.00 0.00 0.00 4.26
4190 7770 8.603181 GTTGTTATTGATGCTTTTGACTTTGTT 58.397 29.630 0.00 0.00 0.00 2.83
4280 7860 3.007506 ACCTGTGTGGATGAACGTGATAA 59.992 43.478 0.00 0.00 39.71 1.75
4281 7861 2.565391 ACCTGTGTGGATGAACGTGATA 59.435 45.455 0.00 0.00 39.71 2.15
4298 7878 3.463944 ACGGCCGAGATAATTTAACCTG 58.536 45.455 35.90 0.00 0.00 4.00
4359 7939 9.693739 ATCAATGTGGTAATAATCCTTGTAACA 57.306 29.630 0.00 0.00 0.00 2.41
4486 8066 3.509575 TGGCTGGCGACTTGATTATTTTT 59.490 39.130 0.00 0.00 0.00 1.94
4491 8071 1.003118 AGTTGGCTGGCGACTTGATTA 59.997 47.619 17.65 0.00 0.00 1.75
4498 8078 0.321298 TTCCTTAGTTGGCTGGCGAC 60.321 55.000 13.37 13.37 0.00 5.19
4585 8165 2.815647 CTTGCCCGCGAAGAGTCC 60.816 66.667 8.23 0.00 0.00 3.85
4593 8173 0.603569 ACTATATCTCCTTGCCCGCG 59.396 55.000 0.00 0.00 0.00 6.46
4628 8209 6.431543 TCCAATTTTCTATGCGTCCAAGTTTA 59.568 34.615 0.00 0.00 0.00 2.01
4709 8297 2.104281 ACTTATCCGAAAATCCTCCCCG 59.896 50.000 0.00 0.00 0.00 5.73
4735 8323 6.597672 TCTTTCCAGATTTACATGCGTATGTT 59.402 34.615 24.19 6.73 45.01 2.71
4882 8470 0.616395 TGGATGTTGGACTCGGCCTA 60.616 55.000 0.00 0.00 0.00 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.