Multiple sequence alignment - TraesCS2A01G188100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G188100 chr2A 100.000 3376 0 0 1 3376 151250565 151253940 0.000000e+00 6235.0
1 TraesCS2A01G188100 chr2A 100.000 1233 0 0 3641 4873 151254205 151255437 0.000000e+00 2278.0
2 TraesCS2A01G188100 chr2A 100.000 561 0 0 5095 5655 151255659 151256219 0.000000e+00 1037.0
3 TraesCS2A01G188100 chr2A 80.392 204 29 10 169 365 459156111 459156310 1.640000e-30 145.0
4 TraesCS2A01G188100 chr2A 96.000 50 1 1 2863 2912 768213841 768213793 4.700000e-11 80.5
5 TraesCS2A01G188100 chr2D 95.678 2036 58 9 745 2755 150395002 150392972 0.000000e+00 3245.0
6 TraesCS2A01G188100 chr2D 96.105 1181 41 3 3641 4821 150392265 150391090 0.000000e+00 1921.0
7 TraesCS2A01G188100 chr2D 96.644 447 13 1 2930 3376 150392735 150392291 0.000000e+00 741.0
8 TraesCS2A01G188100 chr2D 90.845 284 15 3 5372 5655 150390901 150390629 2.490000e-98 370.0
9 TraesCS2A01G188100 chr2D 97.156 211 6 0 2655 2865 150392973 150392763 1.940000e-94 357.0
10 TraesCS2A01G188100 chr2B 94.362 1277 46 10 760 2015 209100208 209098937 0.000000e+00 1936.0
11 TraesCS2A01G188100 chr2B 92.329 1095 67 7 3729 4821 209097880 209096801 0.000000e+00 1541.0
12 TraesCS2A01G188100 chr2B 84.152 448 41 13 2930 3376 209098180 209097762 1.900000e-109 407.0
13 TraesCS2A01G188100 chr2B 87.417 302 34 2 2564 2865 209098505 209098208 1.510000e-90 344.0
14 TraesCS2A01G188100 chr2B 92.273 220 11 2 5436 5650 209096324 209096106 1.980000e-79 307.0
15 TraesCS2A01G188100 chr2B 90.104 192 13 4 2380 2566 209098774 209098584 1.570000e-60 244.0
16 TraesCS2A01G188100 chr2B 93.333 60 3 1 695 753 209130559 209130500 2.810000e-13 87.9
17 TraesCS2A01G188100 chr2B 100.000 37 0 0 2012 2048 405757698 405757734 1.020000e-07 69.4
18 TraesCS2A01G188100 chr2B 100.000 30 0 0 695 724 209130585 209130556 7.910000e-04 56.5
19 TraesCS2A01G188100 chr2B 100.000 30 0 0 2019 2048 660157840 660157811 7.910000e-04 56.5
20 TraesCS2A01G188100 chr7D 84.181 708 90 15 3 694 197874159 197874860 0.000000e+00 667.0
21 TraesCS2A01G188100 chr7D 83.618 702 91 17 3 685 473577764 473577068 6.180000e-179 638.0
22 TraesCS2A01G188100 chr7D 81.669 731 112 14 3 716 573718295 573717570 6.310000e-164 588.0
23 TraesCS2A01G188100 chr7D 81.579 722 108 17 3 706 50136001 50135287 1.770000e-159 573.0
24 TraesCS2A01G188100 chr7D 88.889 54 2 1 2862 2911 13905705 13905652 4.730000e-06 63.9
25 TraesCS2A01G188100 chr3A 84.225 710 81 20 3 702 575482540 575483228 0.000000e+00 662.0
26 TraesCS2A01G188100 chr3A 79.917 722 97 22 3 707 593357477 593358167 2.370000e-133 486.0
27 TraesCS2A01G188100 chr3A 96.000 50 2 0 2863 2912 8602172 8602123 1.310000e-11 82.4
28 TraesCS2A01G188100 chr1D 84.023 701 88 16 3 686 8924254 8923561 0.000000e+00 652.0
29 TraesCS2A01G188100 chr1D 83.405 699 97 12 3 685 110922039 110922734 1.030000e-176 630.0
30 TraesCS2A01G188100 chr1D 82.546 699 91 15 3 685 190761641 190760958 2.270000e-163 586.0
31 TraesCS2A01G188100 chr1D 81.402 699 83 24 3 685 489983858 489983191 1.400000e-145 527.0
32 TraesCS2A01G188100 chr1D 95.556 45 2 0 2876 2920 200465143 200465099 7.860000e-09 73.1
33 TraesCS2A01G188100 chr1D 91.304 46 4 0 2873 2918 69110764 69110719 4.730000e-06 63.9
34 TraesCS2A01G188100 chr1D 100.000 31 0 0 2018 2048 372835753 372835783 2.200000e-04 58.4
35 TraesCS2A01G188100 chr1D 100.000 30 0 0 2019 2048 249030319 249030348 7.910000e-04 56.5
36 TraesCS2A01G188100 chr1D 100.000 30 0 0 2019 2048 484242377 484242406 7.910000e-04 56.5
37 TraesCS2A01G188100 chr1A 83.714 700 92 11 3 685 583247731 583248425 4.780000e-180 641.0
38 TraesCS2A01G188100 chr1A 91.667 48 4 0 2873 2920 342432977 342432930 3.660000e-07 67.6
39 TraesCS2A01G188100 chr1A 93.333 45 2 1 2873 2916 532473041 532472997 1.320000e-06 65.8
40 TraesCS2A01G188100 chr1A 100.000 30 0 0 2019 2048 298603689 298603660 7.910000e-04 56.5
41 TraesCS2A01G188100 chr1A 96.875 32 1 0 2017 2048 351346868 351346837 3.000000e-03 54.7
42 TraesCS2A01G188100 chr1A 100.000 28 0 0 2019 2046 454335277 454335250 1.000000e-02 52.8
43 TraesCS2A01G188100 chr6A 83.149 724 95 19 3 707 60755929 60755214 2.220000e-178 636.0
44 TraesCS2A01G188100 chr6A 82.953 657 86 18 3 641 600528795 600529443 2.290000e-158 569.0
45 TraesCS2A01G188100 chr6A 84.879 496 57 10 1 482 127567904 127567413 8.520000e-133 484.0
46 TraesCS2A01G188100 chr7A 83.475 708 85 15 3 700 287179657 287178972 1.030000e-176 630.0
47 TraesCS2A01G188100 chr6D 82.768 708 92 11 3 695 140104287 140103595 6.270000e-169 604.0
48 TraesCS2A01G188100 chr6D 95.000 40 2 0 2873 2912 27308659 27308698 4.730000e-06 63.9
49 TraesCS2A01G188100 chr6D 95.000 40 2 0 2873 2912 34808969 34809008 4.730000e-06 63.9
50 TraesCS2A01G188100 chr6D 93.023 43 3 0 2873 2915 157328071 157328113 4.730000e-06 63.9
51 TraesCS2A01G188100 chr6D 95.000 40 2 0 2873 2912 226771591 226771552 4.730000e-06 63.9
52 TraesCS2A01G188100 chr6D 91.489 47 2 1 2878 2922 417354735 417354689 4.730000e-06 63.9
53 TraesCS2A01G188100 chr6D 89.583 48 5 0 2878 2925 441898347 441898394 1.700000e-05 62.1
54 TraesCS2A01G188100 chr5D 84.261 629 84 10 1 618 404869788 404869164 2.920000e-167 599.0
55 TraesCS2A01G188100 chr5D 80.056 712 106 22 3 701 556516378 556517066 3.940000e-136 496.0
56 TraesCS2A01G188100 chr5D 97.436 39 1 0 2878 2916 379964238 379964276 3.660000e-07 67.6
57 TraesCS2A01G188100 chr5D 91.667 48 4 0 2873 2920 558068105 558068058 3.660000e-07 67.6
58 TraesCS2A01G188100 chr5D 88.679 53 3 2 2878 2927 182800889 182800941 1.700000e-05 62.1
59 TraesCS2A01G188100 chr5B 81.641 719 113 13 3 706 33258140 33257426 3.800000e-161 579.0
60 TraesCS2A01G188100 chr5B 100.000 31 0 0 2018 2048 699438517 699438487 2.200000e-04 58.4
61 TraesCS2A01G188100 chr6B 81.051 723 112 14 3 706 675216593 675215877 2.300000e-153 553.0
62 TraesCS2A01G188100 chr6B 90.566 53 2 1 2863 2912 7144747 7144799 3.660000e-07 67.6
63 TraesCS2A01G188100 chr6B 91.489 47 4 0 2873 2919 534906797 534906751 1.320000e-06 65.8
64 TraesCS2A01G188100 chr3B 80.193 727 117 20 1 706 790205839 790206559 2.340000e-143 520.0
65 TraesCS2A01G188100 chr4D 83.501 497 61 13 3 483 425162377 425161886 1.450000e-120 444.0
66 TraesCS2A01G188100 chr4D 90.000 50 4 1 2873 2921 497178568 497178519 4.730000e-06 63.9
67 TraesCS2A01G188100 chr4D 88.889 54 1 1 2863 2911 10484884 10484937 1.700000e-05 62.1
68 TraesCS2A01G188100 chr4D 96.970 33 1 0 2016 2048 402560209 402560177 7.910000e-04 56.5
69 TraesCS2A01G188100 chr4D 96.970 33 0 1 2016 2048 51074161 51074192 3.000000e-03 54.7
70 TraesCS2A01G188100 chr3D 81.670 491 73 12 227 707 374251719 374251236 5.310000e-105 392.0
71 TraesCS2A01G188100 chr7B 90.909 55 1 3 2863 2916 32469362 32469311 2.830000e-08 71.3
72 TraesCS2A01G188100 chr7B 86.567 67 2 2 2856 2916 48470298 48470233 3.660000e-07 67.6
73 TraesCS2A01G188100 chr7B 90.385 52 2 1 2863 2911 589739577 589739526 1.320000e-06 65.8
74 TraesCS2A01G188100 chr5A 95.349 43 2 0 2873 2915 617361930 617361972 1.020000e-07 69.4
75 TraesCS2A01G188100 chr5A 95.238 42 2 0 2878 2919 78157160 78157119 3.660000e-07 67.6
76 TraesCS2A01G188100 chr5A 96.970 33 1 0 2016 2048 42674326 42674358 7.910000e-04 56.5
77 TraesCS2A01G188100 chrUn 95.238 42 2 0 2873 2914 350272987 350272946 3.660000e-07 67.6
78 TraesCS2A01G188100 chrUn 95.238 42 2 0 2873 2914 463419422 463419381 3.660000e-07 67.6
79 TraesCS2A01G188100 chrUn 95.000 40 2 0 2873 2912 110732005 110731966 4.730000e-06 63.9
80 TraesCS2A01G188100 chrUn 95.000 40 2 0 2873 2912 232649861 232649822 4.730000e-06 63.9
81 TraesCS2A01G188100 chrUn 94.872 39 2 0 2874 2912 101670992 101671030 1.700000e-05 62.1
82 TraesCS2A01G188100 chrUn 92.857 42 3 0 2873 2914 238400642 238400601 1.700000e-05 62.1
83 TraesCS2A01G188100 chrUn 95.000 40 1 1 2878 2916 325927234 325927273 1.700000e-05 62.1
84 TraesCS2A01G188100 chrUn 94.872 39 2 0 2878 2916 335557700 335557738 1.700000e-05 62.1
85 TraesCS2A01G188100 chrUn 97.222 36 1 0 2878 2913 359670045 359670010 1.700000e-05 62.1
86 TraesCS2A01G188100 chrUn 92.683 41 3 0 2874 2914 13209380 13209340 6.120000e-05 60.2
87 TraesCS2A01G188100 chrUn 91.111 45 1 2 2878 2922 24845280 24845321 2.200000e-04 58.4
88 TraesCS2A01G188100 chrUn 91.111 45 1 2 2878 2922 24852064 24852105 2.200000e-04 58.4
89 TraesCS2A01G188100 chrUn 89.583 48 2 2 2878 2925 375923775 375923731 2.200000e-04 58.4
90 TraesCS2A01G188100 chr4B 93.182 44 3 0 2873 2916 399119789 399119746 1.320000e-06 65.8
91 TraesCS2A01G188100 chr4B 100.000 28 0 0 2018 2045 117385598 117385625 1.000000e-02 52.8
92 TraesCS2A01G188100 chr1B 100.000 32 0 0 2017 2048 378835245 378835214 6.120000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G188100 chr2A 151250565 151256219 5654 False 3183.333333 6235 100.000000 1 5655 3 chr2A.!!$F2 5654
1 TraesCS2A01G188100 chr2D 150390629 150395002 4373 True 1326.800000 3245 95.285600 745 5655 5 chr2D.!!$R1 4910
2 TraesCS2A01G188100 chr2B 209096106 209100208 4102 True 796.500000 1936 90.106167 760 5650 6 chr2B.!!$R2 4890
3 TraesCS2A01G188100 chr7D 197874159 197874860 701 False 667.000000 667 84.181000 3 694 1 chr7D.!!$F1 691
4 TraesCS2A01G188100 chr7D 473577068 473577764 696 True 638.000000 638 83.618000 3 685 1 chr7D.!!$R3 682
5 TraesCS2A01G188100 chr7D 573717570 573718295 725 True 588.000000 588 81.669000 3 716 1 chr7D.!!$R4 713
6 TraesCS2A01G188100 chr7D 50135287 50136001 714 True 573.000000 573 81.579000 3 706 1 chr7D.!!$R2 703
7 TraesCS2A01G188100 chr3A 575482540 575483228 688 False 662.000000 662 84.225000 3 702 1 chr3A.!!$F1 699
8 TraesCS2A01G188100 chr3A 593357477 593358167 690 False 486.000000 486 79.917000 3 707 1 chr3A.!!$F2 704
9 TraesCS2A01G188100 chr1D 8923561 8924254 693 True 652.000000 652 84.023000 3 686 1 chr1D.!!$R1 683
10 TraesCS2A01G188100 chr1D 110922039 110922734 695 False 630.000000 630 83.405000 3 685 1 chr1D.!!$F1 682
11 TraesCS2A01G188100 chr1D 190760958 190761641 683 True 586.000000 586 82.546000 3 685 1 chr1D.!!$R3 682
12 TraesCS2A01G188100 chr1D 489983191 489983858 667 True 527.000000 527 81.402000 3 685 1 chr1D.!!$R5 682
13 TraesCS2A01G188100 chr1A 583247731 583248425 694 False 641.000000 641 83.714000 3 685 1 chr1A.!!$F1 682
14 TraesCS2A01G188100 chr6A 60755214 60755929 715 True 636.000000 636 83.149000 3 707 1 chr6A.!!$R1 704
15 TraesCS2A01G188100 chr6A 600528795 600529443 648 False 569.000000 569 82.953000 3 641 1 chr6A.!!$F1 638
16 TraesCS2A01G188100 chr7A 287178972 287179657 685 True 630.000000 630 83.475000 3 700 1 chr7A.!!$R1 697
17 TraesCS2A01G188100 chr6D 140103595 140104287 692 True 604.000000 604 82.768000 3 695 1 chr6D.!!$R1 692
18 TraesCS2A01G188100 chr5D 404869164 404869788 624 True 599.000000 599 84.261000 1 618 1 chr5D.!!$R1 617
19 TraesCS2A01G188100 chr5D 556516378 556517066 688 False 496.000000 496 80.056000 3 701 1 chr5D.!!$F3 698
20 TraesCS2A01G188100 chr5B 33257426 33258140 714 True 579.000000 579 81.641000 3 706 1 chr5B.!!$R1 703
21 TraesCS2A01G188100 chr6B 675215877 675216593 716 True 553.000000 553 81.051000 3 706 1 chr6B.!!$R2 703
22 TraesCS2A01G188100 chr3B 790205839 790206559 720 False 520.000000 520 80.193000 1 706 1 chr3B.!!$F1 705

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
740 781 0.117541 TGTAGGGGGTCCTGTTAGCA 59.882 55.000 0.00 0.0 44.61 3.49 F
744 785 0.404426 GGGGGTCCTGTTAGCACTTT 59.596 55.000 0.00 0.0 0.00 2.66 F
745 786 1.203013 GGGGGTCCTGTTAGCACTTTT 60.203 52.381 0.00 0.0 0.00 2.27 F
1392 1437 1.424493 GCGTTCGCATCAAGGAGGAG 61.424 60.000 12.33 0.0 0.00 3.69 F
2667 2823 1.136828 ACCTACAAGGCCACAGTTCA 58.863 50.000 5.01 0.0 39.63 3.18 F
2942 3206 0.036388 TGGTTTCATCTGGTCCTCGC 60.036 55.000 0.00 0.0 0.00 5.03 F
2961 3225 0.670162 CTGCACAAACTGGGTTCTGG 59.330 55.000 0.00 0.0 0.00 3.86 F
4222 4487 1.135094 ATGACATGGCTCCGATCCTT 58.865 50.000 0.00 0.0 0.00 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1647 1692 1.128200 CATAATCCCGTGACCTCCCA 58.872 55.000 0.00 0.00 0.00 4.37 R
2092 2160 1.694696 ACTAAGCATAGCCTGGGTAGC 59.305 52.381 11.70 13.74 31.96 3.58 R
2097 2165 2.283298 CACACACTAAGCATAGCCTGG 58.717 52.381 0.00 0.00 31.96 4.45 R
2942 3206 0.670162 CCAGAACCCAGTTTGTGCAG 59.330 55.000 0.00 0.00 0.00 4.41 R
4252 4517 0.176449 GGTAGTTGGTCCCGCGTATT 59.824 55.000 4.92 0.00 0.00 1.89 R
4300 4565 0.679960 TGATCAAGAGGCGGTCGAGA 60.680 55.000 0.00 0.00 0.00 4.04 R
4456 4721 2.641305 GCAGAAGTGATCAGCTGGATT 58.359 47.619 15.13 0.00 37.56 3.01 R
5222 5514 0.305922 GCACGGCAGAACAGATATGC 59.694 55.000 0.00 0.00 39.25 3.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 83 5.159209 TCGTCTTGACGAGATCTTTAAACC 58.841 41.667 19.99 0.00 37.20 3.27
97 102 9.473007 TTTAAACCAGATTCCATGTTGATATGA 57.527 29.630 0.00 0.00 0.00 2.15
99 104 7.520451 AACCAGATTCCATGTTGATATGATG 57.480 36.000 0.00 0.00 0.00 3.07
128 149 5.465532 TTTGCTCAAAAGTTGCCATGATA 57.534 34.783 0.00 0.00 0.00 2.15
174 195 7.812648 GTGTTTACACTAAAGTTGCCATATGA 58.187 34.615 3.65 0.00 43.25 2.15
178 199 6.892658 ACACTAAAGTTGCCATATGACAAA 57.107 33.333 5.98 0.00 0.00 2.83
319 343 9.165035 CAATTTTAGTTTATGGTTCATGGCAAT 57.835 29.630 0.00 0.00 0.00 3.56
321 345 9.737844 ATTTTAGTTTATGGTTCATGGCAATTT 57.262 25.926 0.00 0.00 0.00 1.82
326 350 7.818930 AGTTTATGGTTCATGGCAATTTTAGTG 59.181 33.333 0.00 0.00 0.00 2.74
330 354 6.629128 TGGTTCATGGCAATTTTAGTGTATG 58.371 36.000 0.00 0.00 0.00 2.39
335 359 8.291191 TCATGGCAATTTTAGTGTATGAATCA 57.709 30.769 0.00 0.00 0.00 2.57
337 361 8.974408 CATGGCAATTTTAGTGTATGAATCATG 58.026 33.333 5.91 0.00 0.00 3.07
338 362 8.291191 TGGCAATTTTAGTGTATGAATCATGA 57.709 30.769 5.91 0.00 0.00 3.07
401 438 6.845302 TGAAACATATCATGTCAACTTCAGC 58.155 36.000 0.00 0.00 44.07 4.26
402 439 6.430616 TGAAACATATCATGTCAACTTCAGCA 59.569 34.615 0.00 0.00 44.07 4.41
621 662 3.942796 GCATGCATGCGGTGATTTA 57.057 47.368 33.99 0.00 44.67 1.40
664 705 3.531538 ACATGTGAACGGATATCGCTTT 58.468 40.909 0.00 0.00 43.89 3.51
722 763 6.907206 TTTTGAGGAGAAGCATTGTTTTTG 57.093 33.333 0.00 0.00 0.00 2.44
723 764 5.596836 TTGAGGAGAAGCATTGTTTTTGT 57.403 34.783 0.00 0.00 0.00 2.83
724 765 6.707440 TTGAGGAGAAGCATTGTTTTTGTA 57.293 33.333 0.00 0.00 0.00 2.41
725 766 6.317789 TGAGGAGAAGCATTGTTTTTGTAG 57.682 37.500 0.00 0.00 0.00 2.74
726 767 5.241506 TGAGGAGAAGCATTGTTTTTGTAGG 59.758 40.000 0.00 0.00 0.00 3.18
727 768 4.524328 AGGAGAAGCATTGTTTTTGTAGGG 59.476 41.667 0.00 0.00 0.00 3.53
728 769 4.321974 GGAGAAGCATTGTTTTTGTAGGGG 60.322 45.833 0.00 0.00 0.00 4.79
729 770 3.578282 AGAAGCATTGTTTTTGTAGGGGG 59.422 43.478 0.00 0.00 0.00 5.40
730 771 2.970987 AGCATTGTTTTTGTAGGGGGT 58.029 42.857 0.00 0.00 0.00 4.95
731 772 2.897326 AGCATTGTTTTTGTAGGGGGTC 59.103 45.455 0.00 0.00 0.00 4.46
732 773 2.028476 GCATTGTTTTTGTAGGGGGTCC 60.028 50.000 0.00 0.00 0.00 4.46
733 774 3.506398 CATTGTTTTTGTAGGGGGTCCT 58.494 45.455 0.00 0.00 46.96 3.85
734 775 2.668144 TGTTTTTGTAGGGGGTCCTG 57.332 50.000 0.00 0.00 44.61 3.86
735 776 1.854280 TGTTTTTGTAGGGGGTCCTGT 59.146 47.619 0.00 0.00 44.61 4.00
736 777 2.245287 TGTTTTTGTAGGGGGTCCTGTT 59.755 45.455 0.00 0.00 44.61 3.16
737 778 3.462579 TGTTTTTGTAGGGGGTCCTGTTA 59.537 43.478 0.00 0.00 44.61 2.41
738 779 4.077108 GTTTTTGTAGGGGGTCCTGTTAG 58.923 47.826 0.00 0.00 44.61 2.34
739 780 1.282382 TTGTAGGGGGTCCTGTTAGC 58.718 55.000 0.00 0.00 44.61 3.09
740 781 0.117541 TGTAGGGGGTCCTGTTAGCA 59.882 55.000 0.00 0.00 44.61 3.49
741 782 0.540454 GTAGGGGGTCCTGTTAGCAC 59.460 60.000 0.00 0.00 44.61 4.40
742 783 0.416231 TAGGGGGTCCTGTTAGCACT 59.584 55.000 0.00 0.00 44.61 4.40
743 784 0.475828 AGGGGGTCCTGTTAGCACTT 60.476 55.000 0.00 0.00 42.98 3.16
744 785 0.404426 GGGGGTCCTGTTAGCACTTT 59.596 55.000 0.00 0.00 0.00 2.66
745 786 1.203013 GGGGGTCCTGTTAGCACTTTT 60.203 52.381 0.00 0.00 0.00 2.27
746 787 1.886542 GGGGTCCTGTTAGCACTTTTG 59.113 52.381 0.00 0.00 0.00 2.44
747 788 2.583143 GGGTCCTGTTAGCACTTTTGT 58.417 47.619 0.00 0.00 0.00 2.83
748 789 2.956333 GGGTCCTGTTAGCACTTTTGTT 59.044 45.455 0.00 0.00 0.00 2.83
758 799 6.597672 TGTTAGCACTTTTGTTTTCTCTGAGA 59.402 34.615 2.58 2.58 0.00 3.27
771 812 1.767681 CTCTGAGAAGGAGGGGGAATG 59.232 57.143 0.00 0.00 0.00 2.67
792 833 2.421952 GGCATTACATCTGGGCTGAAGA 60.422 50.000 0.00 0.00 0.00 2.87
852 893 3.620966 CGCTCTTCTCATTTTTCTCCCCT 60.621 47.826 0.00 0.00 0.00 4.79
853 894 3.944650 GCTCTTCTCATTTTTCTCCCCTC 59.055 47.826 0.00 0.00 0.00 4.30
883 925 1.934480 TCCCCTCCGCCTCCATATATA 59.066 52.381 0.00 0.00 0.00 0.86
974 1016 4.138290 TCACGAAAAAGGGCAACATCTAA 58.862 39.130 0.00 0.00 39.74 2.10
975 1017 4.215399 TCACGAAAAAGGGCAACATCTAAG 59.785 41.667 0.00 0.00 39.74 2.18
976 1018 3.057526 ACGAAAAAGGGCAACATCTAAGC 60.058 43.478 0.00 0.00 39.74 3.09
1392 1437 1.424493 GCGTTCGCATCAAGGAGGAG 61.424 60.000 12.33 0.00 0.00 3.69
1605 1650 2.827051 CGGGGATGTGATTGCGCTG 61.827 63.158 9.73 0.00 0.00 5.18
1647 1692 2.036256 AAGCTTGGCCGCTCCATT 59.964 55.556 5.54 0.00 46.04 3.16
1671 1716 2.037772 GAGGTCACGGGATTATGATGCT 59.962 50.000 0.00 0.00 0.00 3.79
1785 1830 6.653020 TGATGTCATCAATAGCAGGTAACTT 58.347 36.000 13.25 0.00 40.47 2.66
1839 1905 8.950210 AGTTAGAGAATTGGACATACAACAATG 58.050 33.333 0.00 0.00 35.22 2.82
1854 1920 5.111293 ACAACAATGAAGCCACTTTTCTTG 58.889 37.500 0.00 0.00 0.00 3.02
1858 1924 1.956477 TGAAGCCACTTTTCTTGCCTC 59.044 47.619 0.00 0.00 0.00 4.70
1867 1933 6.231211 CCACTTTTCTTGCCTCTAGAAACTA 58.769 40.000 0.00 0.00 40.33 2.24
1873 1939 5.326069 TCTTGCCTCTAGAAACTAGACAGT 58.674 41.667 0.00 0.00 36.19 3.55
1969 2035 5.482908 CAAGAGGACACTTGCTAGTTACAT 58.517 41.667 0.00 0.00 40.24 2.29
1981 2047 5.815581 TGCTAGTTACATGTCTCCCAAAAT 58.184 37.500 0.00 0.00 0.00 1.82
2044 2112 4.018779 TCCCTCCGTTCCATAATTCTTGTT 60.019 41.667 0.00 0.00 0.00 2.83
2092 2160 5.308825 AGGATAACTGTTGGTGACTTTGAG 58.691 41.667 2.69 0.00 0.00 3.02
2093 2161 4.083271 GGATAACTGTTGGTGACTTTGAGC 60.083 45.833 2.69 0.00 0.00 4.26
2097 2165 2.808543 CTGTTGGTGACTTTGAGCTACC 59.191 50.000 0.00 0.00 0.00 3.18
2125 2193 4.552166 ATGCTTAGTGTGTGTGTTTGTC 57.448 40.909 0.00 0.00 0.00 3.18
2153 2221 4.079970 TGTGATAGACTATCCATCGTCCC 58.920 47.826 17.92 0.00 34.26 4.46
2162 2230 2.754946 TCCATCGTCCCACAAACTAC 57.245 50.000 0.00 0.00 0.00 2.73
2295 2365 3.769739 ACTTGCACATCCTGAACTGTA 57.230 42.857 0.00 0.00 0.00 2.74
2395 2465 6.457355 AGTGAATAAGATCATCTAGCTGCTG 58.543 40.000 13.43 2.51 0.00 4.41
2667 2823 1.136828 ACCTACAAGGCCACAGTTCA 58.863 50.000 5.01 0.00 39.63 3.18
2669 2825 1.611673 CCTACAAGGCCACAGTTCAGG 60.612 57.143 5.01 0.99 0.00 3.86
2745 2901 4.660168 AGATCCTGCAATCAATATCCACC 58.340 43.478 1.40 0.00 0.00 4.61
2865 3119 7.250032 TCATGCCATAAGATTAGCTGATACT 57.750 36.000 0.00 0.00 0.00 2.12
2866 3120 7.326454 TCATGCCATAAGATTAGCTGATACTC 58.674 38.462 0.00 0.00 0.00 2.59
2867 3121 6.042638 TGCCATAAGATTAGCTGATACTCC 57.957 41.667 0.00 0.00 0.00 3.85
2868 3122 5.046304 TGCCATAAGATTAGCTGATACTCCC 60.046 44.000 0.00 0.00 0.00 4.30
2869 3123 5.188751 GCCATAAGATTAGCTGATACTCCCT 59.811 44.000 0.00 0.00 0.00 4.20
2870 3124 6.629291 GCCATAAGATTAGCTGATACTCCCTC 60.629 46.154 0.00 0.00 0.00 4.30
2871 3125 6.127196 CCATAAGATTAGCTGATACTCCCTCC 60.127 46.154 0.00 0.00 0.00 4.30
2872 3126 3.426615 AGATTAGCTGATACTCCCTCCG 58.573 50.000 0.00 0.00 0.00 4.63
2873 3127 2.750141 TTAGCTGATACTCCCTCCGT 57.250 50.000 0.00 0.00 0.00 4.69
2874 3128 3.870538 TTAGCTGATACTCCCTCCGTA 57.129 47.619 0.00 0.00 0.00 4.02
2875 3129 2.750141 AGCTGATACTCCCTCCGTAA 57.250 50.000 0.00 0.00 0.00 3.18
2876 3130 3.028094 AGCTGATACTCCCTCCGTAAA 57.972 47.619 0.00 0.00 0.00 2.01
2877 3131 2.694109 AGCTGATACTCCCTCCGTAAAC 59.306 50.000 0.00 0.00 0.00 2.01
2878 3132 2.694109 GCTGATACTCCCTCCGTAAACT 59.306 50.000 0.00 0.00 0.00 2.66
2879 3133 3.887716 GCTGATACTCCCTCCGTAAACTA 59.112 47.826 0.00 0.00 0.00 2.24
2880 3134 4.340381 GCTGATACTCCCTCCGTAAACTAA 59.660 45.833 0.00 0.00 0.00 2.24
2881 3135 5.010820 GCTGATACTCCCTCCGTAAACTAAT 59.989 44.000 0.00 0.00 0.00 1.73
2882 3136 6.645790 TGATACTCCCTCCGTAAACTAATC 57.354 41.667 0.00 0.00 0.00 1.75
2883 3137 5.240183 TGATACTCCCTCCGTAAACTAATCG 59.760 44.000 0.00 0.00 0.00 3.34
2884 3138 2.100418 ACTCCCTCCGTAAACTAATCGC 59.900 50.000 0.00 0.00 0.00 4.58
2885 3139 2.361438 CTCCCTCCGTAAACTAATCGCT 59.639 50.000 0.00 0.00 0.00 4.93
2886 3140 2.360165 TCCCTCCGTAAACTAATCGCTC 59.640 50.000 0.00 0.00 0.00 5.03
2887 3141 2.361438 CCCTCCGTAAACTAATCGCTCT 59.639 50.000 0.00 0.00 0.00 4.09
2888 3142 3.181478 CCCTCCGTAAACTAATCGCTCTT 60.181 47.826 0.00 0.00 0.00 2.85
2889 3143 4.037208 CCCTCCGTAAACTAATCGCTCTTA 59.963 45.833 0.00 0.00 0.00 2.10
2890 3144 5.278858 CCCTCCGTAAACTAATCGCTCTTAT 60.279 44.000 0.00 0.00 0.00 1.73
2891 3145 6.072286 CCCTCCGTAAACTAATCGCTCTTATA 60.072 42.308 0.00 0.00 0.00 0.98
2892 3146 7.362747 CCCTCCGTAAACTAATCGCTCTTATAT 60.363 40.741 0.00 0.00 0.00 0.86
2893 3147 8.027771 CCTCCGTAAACTAATCGCTCTTATATT 58.972 37.037 0.00 0.00 0.00 1.28
2896 3150 9.837525 CCGTAAACTAATCGCTCTTATATTAGT 57.162 33.333 0.00 0.00 44.38 2.24
2905 3159 9.915629 AATCGCTCTTATATTAGTTTACAGAGG 57.084 33.333 0.00 0.00 0.00 3.69
2906 3160 7.883217 TCGCTCTTATATTAGTTTACAGAGGG 58.117 38.462 0.00 0.00 39.80 4.30
2907 3161 7.722728 TCGCTCTTATATTAGTTTACAGAGGGA 59.277 37.037 8.49 8.49 42.97 4.20
2908 3162 8.024285 CGCTCTTATATTAGTTTACAGAGGGAG 58.976 40.741 4.76 0.00 40.49 4.30
2909 3163 8.862085 GCTCTTATATTAGTTTACAGAGGGAGT 58.138 37.037 0.00 0.00 0.00 3.85
2940 3204 1.630878 AGGTGGTTTCATCTGGTCCTC 59.369 52.381 0.00 0.00 32.14 3.71
2942 3206 0.036388 TGGTTTCATCTGGTCCTCGC 60.036 55.000 0.00 0.00 0.00 5.03
2956 3220 1.893808 CTCGCTGCACAAACTGGGT 60.894 57.895 0.00 0.00 0.00 4.51
2961 3225 0.670162 CTGCACAAACTGGGTTCTGG 59.330 55.000 0.00 0.00 0.00 3.86
3110 3374 8.564574 TGTAAAGAAACATGGTTCTATGAACAC 58.435 33.333 25.88 16.17 36.84 3.32
3120 3384 8.896744 CATGGTTCTATGAACACAAGTCAATAT 58.103 33.333 11.75 0.00 0.00 1.28
3185 3450 2.169352 GCTGTTCTCAGAGATGGGCTAA 59.831 50.000 0.00 0.00 43.76 3.09
3666 3931 9.722184 ATCCTTTATCACATCAGATGATACAAG 57.278 33.333 17.81 10.99 38.48 3.16
3669 3934 3.721035 TCACATCAGATGATACAAGCGG 58.279 45.455 17.81 0.00 32.63 5.52
3688 3953 3.363970 GCGGGTATCTTGTTTCATATGCG 60.364 47.826 0.00 0.00 0.00 4.73
3707 3972 5.300969 TGCGTATTCGACTGTAGTTTACT 57.699 39.130 0.00 0.00 39.71 2.24
3800 4065 5.185828 TCTCTTAGATGACAGTGCTGCTTTA 59.814 40.000 0.00 0.00 0.00 1.85
3814 4079 7.434897 CAGTGCTGCTTTAAATAGTTTTGAACA 59.565 33.333 0.00 0.00 0.00 3.18
3815 4080 7.978975 AGTGCTGCTTTAAATAGTTTTGAACAA 59.021 29.630 0.00 0.00 0.00 2.83
3866 4131 8.700973 TCCTTATACCAGCAAAGTTTTCTTTTT 58.299 29.630 0.00 0.00 46.55 1.94
3891 4156 1.856802 TCGCATCCTTGATCACATCG 58.143 50.000 0.00 0.00 0.00 3.84
3935 4200 7.784633 TTGTTTCATATGCATATTCGAGACA 57.215 32.000 16.71 17.98 0.00 3.41
3936 4201 7.784633 TGTTTCATATGCATATTCGAGACAA 57.215 32.000 19.68 9.72 0.00 3.18
4096 4361 1.370609 TCGACACAAAAGTTGCCGAA 58.629 45.000 0.00 0.00 31.08 4.30
4123 4388 1.416030 GAGGAAGGGAAGGCTGAGATC 59.584 57.143 0.00 0.00 0.00 2.75
4162 4427 2.014335 TCGATGAAGTCCACATGCTG 57.986 50.000 0.00 0.00 0.00 4.41
4186 4451 4.268359 ACATTGAATGCTTCTCCTTCCTC 58.732 43.478 4.84 0.00 0.00 3.71
4222 4487 1.135094 ATGACATGGCTCCGATCCTT 58.865 50.000 0.00 0.00 0.00 3.36
4300 4565 4.124238 CACATGGTATACCGTCGGATTTT 58.876 43.478 20.51 0.00 39.43 1.82
4341 4606 1.944024 CACAACACAACCATACACGGT 59.056 47.619 0.00 0.00 42.71 4.83
4352 4617 2.031870 CATACACGGTGGAGGAGATCA 58.968 52.381 13.48 0.00 0.00 2.92
4375 4640 4.100808 AGGAAGATCTTAGACATCAGGTGC 59.899 45.833 8.25 0.00 0.00 5.01
4474 4739 2.641305 GCAATCCAGCTGATCACTTCT 58.359 47.619 17.39 0.00 31.61 2.85
4481 4746 1.817099 CTGATCACTTCTGCCGGCC 60.817 63.158 26.77 6.44 0.00 6.13
4710 4975 3.449377 TGTATGGCTCGTGTATCTTGGAA 59.551 43.478 0.00 0.00 0.00 3.53
4711 4976 3.845781 ATGGCTCGTGTATCTTGGAAT 57.154 42.857 0.00 0.00 0.00 3.01
4734 4999 6.946229 TCTTGTTGCTCGTTTAGATTAGTC 57.054 37.500 0.00 0.00 0.00 2.59
4735 5000 6.688578 TCTTGTTGCTCGTTTAGATTAGTCT 58.311 36.000 0.00 0.00 38.52 3.24
4747 5012 7.644551 CGTTTAGATTAGTCTTAAGCGTGAGAT 59.355 37.037 0.00 0.00 35.87 2.75
4798 5063 2.028476 TGCAGTGAGCTATGTTAACGGT 60.028 45.455 0.26 0.00 45.94 4.83
4805 5070 5.636543 GTGAGCTATGTTAACGGTTGTAACT 59.363 40.000 3.07 0.00 0.00 2.24
4837 5129 9.463443 CTTCACAATTCGTTTATTTCTTTTCCT 57.537 29.630 0.00 0.00 0.00 3.36
4838 5130 9.810545 TTCACAATTCGTTTATTTCTTTTCCTT 57.189 25.926 0.00 0.00 0.00 3.36
4839 5131 9.810545 TCACAATTCGTTTATTTCTTTTCCTTT 57.189 25.926 0.00 0.00 0.00 3.11
4869 5161 7.977789 TGTGTGTGTCATCAGTTTATATGTT 57.022 32.000 0.00 0.00 0.00 2.71
5118 5410 7.948278 CGACAGATCCCTAGGTTAAAATTAG 57.052 40.000 8.29 0.00 0.00 1.73
5119 5411 7.498443 CGACAGATCCCTAGGTTAAAATTAGT 58.502 38.462 8.29 0.00 0.00 2.24
5120 5412 7.985752 CGACAGATCCCTAGGTTAAAATTAGTT 59.014 37.037 8.29 0.00 0.00 2.24
5121 5413 9.682465 GACAGATCCCTAGGTTAAAATTAGTTT 57.318 33.333 8.29 0.00 0.00 2.66
5122 5414 9.462606 ACAGATCCCTAGGTTAAAATTAGTTTG 57.537 33.333 8.29 0.00 0.00 2.93
5123 5415 9.681062 CAGATCCCTAGGTTAAAATTAGTTTGA 57.319 33.333 8.29 0.00 0.00 2.69
5132 5424 9.596308 AGGTTAAAATTAGTTTGAACTATGGGT 57.404 29.630 9.98 0.00 40.87 4.51
5138 5430 9.869757 AAATTAGTTTGAACTATGGGTTTATGC 57.130 29.630 4.57 0.00 40.87 3.14
5139 5431 5.914898 AGTTTGAACTATGGGTTTATGCC 57.085 39.130 0.00 0.00 38.41 4.40
5140 5432 5.329399 AGTTTGAACTATGGGTTTATGCCA 58.671 37.500 0.00 0.00 38.41 4.92
5141 5433 5.957774 AGTTTGAACTATGGGTTTATGCCAT 59.042 36.000 0.00 0.00 38.41 4.40
5142 5434 7.122715 AGTTTGAACTATGGGTTTATGCCATA 58.877 34.615 0.00 0.00 38.41 2.74
5143 5435 7.285401 AGTTTGAACTATGGGTTTATGCCATAG 59.715 37.037 5.91 5.91 45.01 2.23
5144 5436 6.508030 TGAACTATGGGTTTATGCCATAGA 57.492 37.500 11.05 0.00 43.32 1.98
5145 5437 6.905736 TGAACTATGGGTTTATGCCATAGAA 58.094 36.000 11.05 2.24 43.32 2.10
5146 5438 7.526041 TGAACTATGGGTTTATGCCATAGAAT 58.474 34.615 11.05 0.00 43.32 2.40
5147 5439 7.448161 TGAACTATGGGTTTATGCCATAGAATG 59.552 37.037 11.05 0.00 43.32 2.67
5148 5440 5.711976 ACTATGGGTTTATGCCATAGAATGC 59.288 40.000 11.05 0.00 43.32 3.56
5149 5441 3.908476 TGGGTTTATGCCATAGAATGCA 58.092 40.909 0.00 0.00 42.52 3.96
5151 5443 4.281435 TGGGTTTATGCCATAGAATGCATG 59.719 41.667 0.00 0.00 46.99 4.06
5152 5444 4.523943 GGGTTTATGCCATAGAATGCATGA 59.476 41.667 0.00 0.00 46.99 3.07
5153 5445 5.186409 GGGTTTATGCCATAGAATGCATGAT 59.814 40.000 0.00 0.00 46.99 2.45
5154 5446 6.097356 GGTTTATGCCATAGAATGCATGATG 58.903 40.000 0.00 4.74 46.99 3.07
5155 5447 6.071784 GGTTTATGCCATAGAATGCATGATGA 60.072 38.462 14.88 1.05 46.99 2.92
5156 5448 7.372714 GTTTATGCCATAGAATGCATGATGAA 58.627 34.615 14.88 0.00 46.99 2.57
5157 5449 4.841443 TGCCATAGAATGCATGATGAAC 57.159 40.909 14.88 9.05 31.31 3.18
5158 5450 4.466827 TGCCATAGAATGCATGATGAACT 58.533 39.130 14.88 5.47 31.31 3.01
5159 5451 4.517832 TGCCATAGAATGCATGATGAACTC 59.482 41.667 14.88 1.87 31.31 3.01
5160 5452 4.082895 GCCATAGAATGCATGATGAACTCC 60.083 45.833 14.88 0.00 0.00 3.85
5161 5453 4.153655 CCATAGAATGCATGATGAACTCCG 59.846 45.833 14.88 0.00 0.00 4.63
5162 5454 3.548745 AGAATGCATGATGAACTCCGA 57.451 42.857 0.00 0.00 0.00 4.55
5163 5455 4.082665 AGAATGCATGATGAACTCCGAT 57.917 40.909 0.00 0.00 0.00 4.18
5164 5456 3.813724 AGAATGCATGATGAACTCCGATG 59.186 43.478 0.00 0.00 0.00 3.84
5165 5457 1.957668 TGCATGATGAACTCCGATGG 58.042 50.000 0.00 0.00 0.00 3.51
5166 5458 1.210234 TGCATGATGAACTCCGATGGT 59.790 47.619 0.00 0.00 0.00 3.55
5167 5459 1.600957 GCATGATGAACTCCGATGGTG 59.399 52.381 0.00 0.00 0.00 4.17
5168 5460 2.216046 CATGATGAACTCCGATGGTGG 58.784 52.381 0.00 0.00 0.00 4.61
5169 5461 1.275666 TGATGAACTCCGATGGTGGT 58.724 50.000 0.00 0.00 0.00 4.16
5170 5462 1.066215 TGATGAACTCCGATGGTGGTG 60.066 52.381 0.00 0.00 0.00 4.17
5171 5463 0.392998 ATGAACTCCGATGGTGGTGC 60.393 55.000 0.00 0.00 0.00 5.01
5172 5464 1.296715 GAACTCCGATGGTGGTGCT 59.703 57.895 0.00 0.00 0.00 4.40
5173 5465 0.741221 GAACTCCGATGGTGGTGCTC 60.741 60.000 0.00 0.00 0.00 4.26
5174 5466 1.194781 AACTCCGATGGTGGTGCTCT 61.195 55.000 0.00 0.00 0.00 4.09
5175 5467 0.324368 ACTCCGATGGTGGTGCTCTA 60.324 55.000 0.00 0.00 0.00 2.43
5176 5468 0.824109 CTCCGATGGTGGTGCTCTAA 59.176 55.000 0.00 0.00 0.00 2.10
5177 5469 1.207089 CTCCGATGGTGGTGCTCTAAA 59.793 52.381 0.00 0.00 0.00 1.85
5178 5470 1.066430 TCCGATGGTGGTGCTCTAAAC 60.066 52.381 0.00 0.00 0.00 2.01
5179 5471 1.066143 CCGATGGTGGTGCTCTAAACT 60.066 52.381 0.00 0.00 0.00 2.66
5180 5472 2.615493 CCGATGGTGGTGCTCTAAACTT 60.615 50.000 0.00 0.00 0.00 2.66
5181 5473 3.074412 CGATGGTGGTGCTCTAAACTTT 58.926 45.455 0.00 0.00 0.00 2.66
5182 5474 3.120199 CGATGGTGGTGCTCTAAACTTTG 60.120 47.826 0.00 0.00 0.00 2.77
5183 5475 3.290948 TGGTGGTGCTCTAAACTTTGT 57.709 42.857 0.00 0.00 0.00 2.83
5184 5476 4.425180 TGGTGGTGCTCTAAACTTTGTA 57.575 40.909 0.00 0.00 0.00 2.41
5185 5477 4.385825 TGGTGGTGCTCTAAACTTTGTAG 58.614 43.478 0.00 0.00 0.00 2.74
5186 5478 4.141574 TGGTGGTGCTCTAAACTTTGTAGT 60.142 41.667 0.00 0.00 35.68 2.73
5187 5479 4.213482 GGTGGTGCTCTAAACTTTGTAGTG 59.787 45.833 0.00 0.00 34.01 2.74
5188 5480 3.813166 TGGTGCTCTAAACTTTGTAGTGC 59.187 43.478 0.00 0.00 38.15 4.40
5189 5481 3.120649 GGTGCTCTAAACTTTGTAGTGCG 60.121 47.826 0.00 0.00 39.71 5.34
5190 5482 3.739300 GTGCTCTAAACTTTGTAGTGCGA 59.261 43.478 0.00 0.00 39.71 5.10
5191 5483 4.210537 GTGCTCTAAACTTTGTAGTGCGAA 59.789 41.667 0.00 0.00 39.71 4.70
5192 5484 4.812091 TGCTCTAAACTTTGTAGTGCGAAA 59.188 37.500 0.00 0.00 39.71 3.46
5193 5485 5.294799 TGCTCTAAACTTTGTAGTGCGAAAA 59.705 36.000 0.00 0.00 39.71 2.29
5194 5486 6.017440 TGCTCTAAACTTTGTAGTGCGAAAAT 60.017 34.615 0.00 0.00 39.71 1.82
5195 5487 6.520104 GCTCTAAACTTTGTAGTGCGAAAATC 59.480 38.462 0.00 0.00 34.01 2.17
5196 5488 7.485418 TCTAAACTTTGTAGTGCGAAAATCA 57.515 32.000 0.00 0.00 34.01 2.57
5197 5489 8.094798 TCTAAACTTTGTAGTGCGAAAATCAT 57.905 30.769 0.00 0.00 34.01 2.45
5198 5490 8.564574 TCTAAACTTTGTAGTGCGAAAATCATT 58.435 29.630 0.00 0.00 34.01 2.57
5199 5491 9.180678 CTAAACTTTGTAGTGCGAAAATCATTT 57.819 29.630 0.00 0.00 34.01 2.32
5200 5492 8.419076 AAACTTTGTAGTGCGAAAATCATTTT 57.581 26.923 0.00 0.00 34.01 1.82
5201 5493 9.522804 AAACTTTGTAGTGCGAAAATCATTTTA 57.477 25.926 0.00 0.00 34.01 1.52
5202 5494 9.522804 AACTTTGTAGTGCGAAAATCATTTTAA 57.477 25.926 0.00 0.00 34.01 1.52
5203 5495 9.522804 ACTTTGTAGTGCGAAAATCATTTTAAA 57.477 25.926 0.00 0.00 31.99 1.52
5206 5498 9.906660 TTGTAGTGCGAAAATCATTTTAAATCT 57.093 25.926 0.00 0.00 31.94 2.40
5207 5499 9.340695 TGTAGTGCGAAAATCATTTTAAATCTG 57.659 29.630 0.00 0.00 31.94 2.90
5208 5500 7.281991 AGTGCGAAAATCATTTTAAATCTGC 57.718 32.000 0.00 0.00 31.94 4.26
5209 5501 6.867816 AGTGCGAAAATCATTTTAAATCTGCA 59.132 30.769 0.00 0.00 31.94 4.41
5210 5502 7.062605 AGTGCGAAAATCATTTTAAATCTGCAG 59.937 33.333 7.63 7.63 31.94 4.41
5211 5503 6.867816 TGCGAAAATCATTTTAAATCTGCAGT 59.132 30.769 14.67 0.00 31.94 4.40
5212 5504 8.026026 TGCGAAAATCATTTTAAATCTGCAGTA 58.974 29.630 14.67 0.48 31.94 2.74
5213 5505 8.313931 GCGAAAATCATTTTAAATCTGCAGTAC 58.686 33.333 14.67 0.00 31.94 2.73
5214 5506 8.798153 CGAAAATCATTTTAAATCTGCAGTACC 58.202 33.333 14.67 0.00 31.94 3.34
5215 5507 8.687824 AAAATCATTTTAAATCTGCAGTACCG 57.312 30.769 14.67 0.00 0.00 4.02
5216 5508 7.391148 AATCATTTTAAATCTGCAGTACCGT 57.609 32.000 14.67 0.00 0.00 4.83
5217 5509 6.811253 TCATTTTAAATCTGCAGTACCGTT 57.189 33.333 14.67 4.68 0.00 4.44
5218 5510 7.209471 TCATTTTAAATCTGCAGTACCGTTT 57.791 32.000 14.67 10.45 0.00 3.60
5219 5511 7.653647 TCATTTTAAATCTGCAGTACCGTTTT 58.346 30.769 14.67 7.90 0.00 2.43
5220 5512 8.138712 TCATTTTAAATCTGCAGTACCGTTTTT 58.861 29.630 14.67 6.33 0.00 1.94
5221 5513 9.400638 CATTTTAAATCTGCAGTACCGTTTTTA 57.599 29.630 14.67 5.48 0.00 1.52
5222 5514 9.620660 ATTTTAAATCTGCAGTACCGTTTTTAG 57.379 29.630 14.67 0.00 0.00 1.85
5223 5515 4.680171 AATCTGCAGTACCGTTTTTAGC 57.320 40.909 14.67 0.00 0.00 3.09
5224 5516 3.114668 TCTGCAGTACCGTTTTTAGCA 57.885 42.857 14.67 0.00 0.00 3.49
5225 5517 3.670625 TCTGCAGTACCGTTTTTAGCAT 58.329 40.909 14.67 0.00 0.00 3.79
5226 5518 4.823157 TCTGCAGTACCGTTTTTAGCATA 58.177 39.130 14.67 0.00 0.00 3.14
5227 5519 5.424757 TCTGCAGTACCGTTTTTAGCATAT 58.575 37.500 14.67 0.00 0.00 1.78
5228 5520 5.522460 TCTGCAGTACCGTTTTTAGCATATC 59.478 40.000 14.67 0.00 0.00 1.63
5229 5521 5.424757 TGCAGTACCGTTTTTAGCATATCT 58.575 37.500 0.00 0.00 0.00 1.98
5230 5522 5.293324 TGCAGTACCGTTTTTAGCATATCTG 59.707 40.000 0.00 0.00 0.00 2.90
5231 5523 5.293569 GCAGTACCGTTTTTAGCATATCTGT 59.706 40.000 0.00 0.00 0.00 3.41
5232 5524 6.183360 GCAGTACCGTTTTTAGCATATCTGTT 60.183 38.462 0.00 0.00 0.00 3.16
5233 5525 7.399523 CAGTACCGTTTTTAGCATATCTGTTC 58.600 38.462 0.00 0.00 0.00 3.18
5234 5526 7.277981 CAGTACCGTTTTTAGCATATCTGTTCT 59.722 37.037 0.00 0.00 0.00 3.01
5235 5527 6.422776 ACCGTTTTTAGCATATCTGTTCTG 57.577 37.500 0.00 0.00 0.00 3.02
5236 5528 5.163754 ACCGTTTTTAGCATATCTGTTCTGC 60.164 40.000 0.00 0.00 36.15 4.26
5237 5529 5.266242 CGTTTTTAGCATATCTGTTCTGCC 58.734 41.667 0.00 0.00 36.56 4.85
5238 5530 5.266242 GTTTTTAGCATATCTGTTCTGCCG 58.734 41.667 0.00 0.00 36.56 5.69
5239 5531 3.819564 TTAGCATATCTGTTCTGCCGT 57.180 42.857 0.00 0.00 36.56 5.68
5240 5532 1.945387 AGCATATCTGTTCTGCCGTG 58.055 50.000 0.00 0.00 36.56 4.94
5241 5533 0.305922 GCATATCTGTTCTGCCGTGC 59.694 55.000 0.00 0.00 0.00 5.34
5242 5534 0.940126 CATATCTGTTCTGCCGTGCC 59.060 55.000 0.00 0.00 0.00 5.01
5243 5535 0.530650 ATATCTGTTCTGCCGTGCCG 60.531 55.000 0.00 0.00 0.00 5.69
5244 5536 1.884075 TATCTGTTCTGCCGTGCCGT 61.884 55.000 0.00 0.00 0.00 5.68
5245 5537 3.716006 CTGTTCTGCCGTGCCGTG 61.716 66.667 0.00 0.00 0.00 4.94
5253 5545 2.584970 CCGTGCCGTGCGTGATAT 60.585 61.111 0.00 0.00 0.00 1.63
5254 5546 2.585869 CCGTGCCGTGCGTGATATC 61.586 63.158 0.00 0.00 0.00 1.63
5255 5547 2.916556 CGTGCCGTGCGTGATATCG 61.917 63.158 0.00 0.00 0.00 2.92
5267 5559 4.437858 CGTGATATCGCAGATTCGTTTT 57.562 40.909 16.20 0.00 45.12 2.43
5268 5560 5.555190 CGTGATATCGCAGATTCGTTTTA 57.445 39.130 16.20 0.00 45.12 1.52
5269 5561 5.590439 CGTGATATCGCAGATTCGTTTTAG 58.410 41.667 16.20 0.00 45.12 1.85
5270 5562 5.398416 CGTGATATCGCAGATTCGTTTTAGA 59.602 40.000 16.20 0.00 45.12 2.10
5271 5563 6.397998 CGTGATATCGCAGATTCGTTTTAGAG 60.398 42.308 16.20 0.00 45.12 2.43
5272 5564 5.402568 TGATATCGCAGATTCGTTTTAGAGC 59.597 40.000 0.00 0.00 45.12 4.09
5273 5565 2.954316 TCGCAGATTCGTTTTAGAGCA 58.046 42.857 0.00 0.00 0.00 4.26
5274 5566 3.521560 TCGCAGATTCGTTTTAGAGCAT 58.478 40.909 0.00 0.00 0.00 3.79
5275 5567 3.932710 TCGCAGATTCGTTTTAGAGCATT 59.067 39.130 0.00 0.00 0.00 3.56
5276 5568 5.106442 TCGCAGATTCGTTTTAGAGCATTA 58.894 37.500 0.00 0.00 0.00 1.90
5277 5569 5.005394 TCGCAGATTCGTTTTAGAGCATTAC 59.995 40.000 0.00 0.00 0.00 1.89
5278 5570 5.502606 GCAGATTCGTTTTAGAGCATTACC 58.497 41.667 0.00 0.00 0.00 2.85
5279 5571 5.728255 CAGATTCGTTTTAGAGCATTACCG 58.272 41.667 0.00 0.00 0.00 4.02
5280 5572 4.270325 AGATTCGTTTTAGAGCATTACCGC 59.730 41.667 0.00 0.00 0.00 5.68
5281 5573 2.962125 TCGTTTTAGAGCATTACCGCA 58.038 42.857 0.00 0.00 0.00 5.69
5282 5574 2.927477 TCGTTTTAGAGCATTACCGCAG 59.073 45.455 0.00 0.00 0.00 5.18
5283 5575 2.927477 CGTTTTAGAGCATTACCGCAGA 59.073 45.455 0.00 0.00 0.00 4.26
5284 5576 3.241995 CGTTTTAGAGCATTACCGCAGAC 60.242 47.826 0.00 0.00 0.00 3.51
5285 5577 2.203800 TTAGAGCATTACCGCAGACG 57.796 50.000 0.00 0.00 39.67 4.18
5286 5578 1.385528 TAGAGCATTACCGCAGACGA 58.614 50.000 0.00 0.00 43.93 4.20
5287 5579 0.530744 AGAGCATTACCGCAGACGAA 59.469 50.000 0.00 0.00 43.93 3.85
5288 5580 1.067142 AGAGCATTACCGCAGACGAAA 60.067 47.619 0.00 0.00 43.93 3.46
5289 5581 1.933853 GAGCATTACCGCAGACGAAAT 59.066 47.619 0.00 0.00 43.93 2.17
5290 5582 2.351726 GAGCATTACCGCAGACGAAATT 59.648 45.455 0.00 0.00 43.93 1.82
5291 5583 2.747446 AGCATTACCGCAGACGAAATTT 59.253 40.909 0.00 0.00 43.93 1.82
5292 5584 3.936453 AGCATTACCGCAGACGAAATTTA 59.064 39.130 0.00 0.00 43.93 1.40
5293 5585 4.026407 GCATTACCGCAGACGAAATTTAC 58.974 43.478 0.00 0.00 43.93 2.01
5294 5586 3.976468 TTACCGCAGACGAAATTTACG 57.024 42.857 0.00 0.00 43.93 3.18
5295 5587 1.073177 ACCGCAGACGAAATTTACGG 58.927 50.000 12.45 10.88 43.93 4.02
5296 5588 1.073177 CCGCAGACGAAATTTACGGT 58.927 50.000 12.45 2.77 43.93 4.83
5297 5589 2.261345 CCGCAGACGAAATTTACGGTA 58.739 47.619 12.45 0.00 43.93 4.02
5298 5590 2.028404 CCGCAGACGAAATTTACGGTAC 59.972 50.000 12.45 0.00 43.93 3.34
5328 5620 3.137533 CTCTTAGGGATTAAGCTGCAGC 58.862 50.000 31.53 31.53 38.92 5.25
5345 5637 2.571757 CTAGAACGGCCGTGCAGA 59.428 61.111 37.05 23.29 0.00 4.26
5348 5640 0.036765 TAGAACGGCCGTGCAGAAAT 60.037 50.000 37.05 19.27 0.00 2.17
5369 5661 0.773644 AGCATGTGTCCTTGGAAGGT 59.226 50.000 5.33 0.00 46.54 3.50
5390 5682 4.033019 GTGTAAAAAGTGTCTCAAACCGC 58.967 43.478 0.00 0.00 0.00 5.68
5413 5770 2.345760 GGGTGCCCTTGACATGCTG 61.346 63.158 0.00 0.00 0.00 4.41
5454 5984 5.124936 TGATCTGAATCATGGAAGCAAAGTG 59.875 40.000 0.00 0.00 36.98 3.16
5466 5996 1.800805 GCAAAGTGCAGTAGCTGAGA 58.199 50.000 10.69 0.00 44.26 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 38 9.672086 AAGACGAATTTAATGATGAAAACGAAA 57.328 25.926 10.55 0.00 0.00 3.46
78 83 7.520451 AACCATCATATCAACATGGAATCTG 57.480 36.000 4.18 0.00 39.73 2.90
111 132 7.319646 GGTGTAAATATCATGGCAACTTTTGA 58.680 34.615 0.00 0.00 37.61 2.69
128 149 6.694447 ACACTATGACAACTACGGTGTAAAT 58.306 36.000 0.00 0.00 35.18 1.40
174 195 8.292444 TGCCATGCTCTATAAACTAAATTTGT 57.708 30.769 0.00 0.00 0.00 2.83
289 313 7.605691 CCATGAACCATAAACTAAAATTGCCAA 59.394 33.333 0.00 0.00 0.00 4.52
366 399 9.661187 GACATGATATGTTTCAGCTATTTTCTG 57.339 33.333 0.00 0.00 45.03 3.02
506 546 6.697019 CCGTTTTCACCATTAAATCCATCATC 59.303 38.462 0.00 0.00 0.00 2.92
621 662 7.661127 TGTCTTATAACACATAAACTGCGTT 57.339 32.000 0.00 0.00 34.58 4.84
707 748 3.578282 CCCCCTACAAAAACAATGCTTCT 59.422 43.478 0.00 0.00 0.00 2.85
708 749 3.323691 ACCCCCTACAAAAACAATGCTTC 59.676 43.478 0.00 0.00 0.00 3.86
710 751 2.897326 GACCCCCTACAAAAACAATGCT 59.103 45.455 0.00 0.00 0.00 3.79
711 752 2.028476 GGACCCCCTACAAAAACAATGC 60.028 50.000 0.00 0.00 0.00 3.56
713 754 3.116900 ACAGGACCCCCTACAAAAACAAT 60.117 43.478 0.00 0.00 42.02 2.71
715 756 1.854280 ACAGGACCCCCTACAAAAACA 59.146 47.619 0.00 0.00 42.02 2.83
716 757 2.670019 ACAGGACCCCCTACAAAAAC 57.330 50.000 0.00 0.00 42.02 2.43
717 758 3.499021 GCTAACAGGACCCCCTACAAAAA 60.499 47.826 0.00 0.00 42.02 1.94
718 759 2.040679 GCTAACAGGACCCCCTACAAAA 59.959 50.000 0.00 0.00 42.02 2.44
719 760 1.631898 GCTAACAGGACCCCCTACAAA 59.368 52.381 0.00 0.00 42.02 2.83
720 761 1.282382 GCTAACAGGACCCCCTACAA 58.718 55.000 0.00 0.00 42.02 2.41
721 762 0.117541 TGCTAACAGGACCCCCTACA 59.882 55.000 0.00 0.00 42.02 2.74
722 763 0.540454 GTGCTAACAGGACCCCCTAC 59.460 60.000 0.00 0.00 42.02 3.18
723 764 0.416231 AGTGCTAACAGGACCCCCTA 59.584 55.000 0.00 0.00 42.02 3.53
724 765 0.475828 AAGTGCTAACAGGACCCCCT 60.476 55.000 0.00 0.00 45.74 4.79
725 766 0.404426 AAAGTGCTAACAGGACCCCC 59.596 55.000 0.00 0.00 37.25 5.40
726 767 1.886542 CAAAAGTGCTAACAGGACCCC 59.113 52.381 0.00 0.00 37.25 4.95
727 768 2.583143 ACAAAAGTGCTAACAGGACCC 58.417 47.619 0.00 0.00 37.25 4.46
728 769 4.649088 AAACAAAAGTGCTAACAGGACC 57.351 40.909 0.00 0.00 37.25 4.46
729 770 5.891451 AGAAAACAAAAGTGCTAACAGGAC 58.109 37.500 0.00 0.00 36.76 3.85
730 771 5.885912 AGAGAAAACAAAAGTGCTAACAGGA 59.114 36.000 0.00 0.00 0.00 3.86
731 772 5.973565 CAGAGAAAACAAAAGTGCTAACAGG 59.026 40.000 0.00 0.00 0.00 4.00
732 773 6.785191 TCAGAGAAAACAAAAGTGCTAACAG 58.215 36.000 0.00 0.00 0.00 3.16
733 774 6.597672 TCTCAGAGAAAACAAAAGTGCTAACA 59.402 34.615 0.00 0.00 0.00 2.41
734 775 7.016361 TCTCAGAGAAAACAAAAGTGCTAAC 57.984 36.000 0.00 0.00 0.00 2.34
735 776 7.201732 CCTTCTCAGAGAAAACAAAAGTGCTAA 60.202 37.037 14.01 0.00 33.19 3.09
736 777 6.260936 CCTTCTCAGAGAAAACAAAAGTGCTA 59.739 38.462 14.01 0.00 33.19 3.49
737 778 5.067023 CCTTCTCAGAGAAAACAAAAGTGCT 59.933 40.000 14.01 0.00 33.19 4.40
738 779 5.066505 TCCTTCTCAGAGAAAACAAAAGTGC 59.933 40.000 14.01 0.00 33.19 4.40
739 780 6.238593 CCTCCTTCTCAGAGAAAACAAAAGTG 60.239 42.308 14.01 0.00 33.19 3.16
740 781 5.825151 CCTCCTTCTCAGAGAAAACAAAAGT 59.175 40.000 14.01 0.00 33.19 2.66
741 782 5.240403 CCCTCCTTCTCAGAGAAAACAAAAG 59.760 44.000 14.01 0.52 33.19 2.27
742 783 5.133221 CCCTCCTTCTCAGAGAAAACAAAA 58.867 41.667 14.01 0.00 33.19 2.44
743 784 4.446311 CCCCTCCTTCTCAGAGAAAACAAA 60.446 45.833 14.01 0.00 33.19 2.83
744 785 3.073062 CCCCTCCTTCTCAGAGAAAACAA 59.927 47.826 14.01 0.00 33.19 2.83
745 786 2.639839 CCCCTCCTTCTCAGAGAAAACA 59.360 50.000 14.01 0.50 33.19 2.83
746 787 2.026729 CCCCCTCCTTCTCAGAGAAAAC 60.027 54.545 14.01 0.00 33.19 2.43
747 788 2.158004 TCCCCCTCCTTCTCAGAGAAAA 60.158 50.000 14.01 4.78 33.19 2.29
748 789 1.437149 TCCCCCTCCTTCTCAGAGAAA 59.563 52.381 14.01 0.00 33.19 2.52
758 799 1.217942 GTAATGCCATTCCCCCTCCTT 59.782 52.381 0.00 0.00 0.00 3.36
771 812 1.952296 CTTCAGCCCAGATGTAATGCC 59.048 52.381 0.00 0.00 0.00 4.40
792 833 1.344065 TGATCGTAATGGGCCGGTAT 58.656 50.000 1.90 0.00 0.00 2.73
852 893 1.396594 GGAGGGGAGGAGGAAAGGA 59.603 63.158 0.00 0.00 0.00 3.36
853 894 2.066999 CGGAGGGGAGGAGGAAAGG 61.067 68.421 0.00 0.00 0.00 3.11
1053 1098 4.529219 TGGGAGTGCGCGCCTATG 62.529 66.667 30.77 0.00 34.78 2.23
1392 1437 1.599240 GCCCTCAATGATCTCCGCC 60.599 63.158 0.00 0.00 0.00 6.13
1647 1692 1.128200 CATAATCCCGTGACCTCCCA 58.872 55.000 0.00 0.00 0.00 4.37
1792 1837 3.140325 AGGACAAATTTCTGCGAAGGA 57.860 42.857 0.00 0.00 0.00 3.36
1854 1920 7.010645 GCAAATTACTGTCTAGTTTCTAGAGGC 59.989 40.741 6.72 0.00 38.36 4.70
1858 1924 9.979270 CAATGCAAATTACTGTCTAGTTTCTAG 57.021 33.333 0.00 0.00 38.36 2.43
1867 1933 6.265196 TGAAGGTTCAATGCAAATTACTGTCT 59.735 34.615 0.00 0.00 33.55 3.41
1873 1939 5.697473 TCGTGAAGGTTCAATGCAAATTA 57.303 34.783 0.00 0.00 39.21 1.40
2008 2074 6.785963 TGGAACGGAGGGAGTAGAATATAAAT 59.214 38.462 0.00 0.00 0.00 1.40
2009 2075 6.138263 TGGAACGGAGGGAGTAGAATATAAA 58.862 40.000 0.00 0.00 0.00 1.40
2012 2078 4.194678 TGGAACGGAGGGAGTAGAATAT 57.805 45.455 0.00 0.00 0.00 1.28
2028 2096 9.959749 TTTAGTTCACAACAAGAATTATGGAAC 57.040 29.630 0.00 0.00 31.89 3.62
2092 2160 1.694696 ACTAAGCATAGCCTGGGTAGC 59.305 52.381 11.70 13.74 31.96 3.58
2093 2161 2.700897 ACACTAAGCATAGCCTGGGTAG 59.299 50.000 11.70 0.75 31.96 3.18
2097 2165 2.283298 CACACACTAAGCATAGCCTGG 58.717 52.381 0.00 0.00 31.96 4.45
2125 2193 5.563671 CGATGGATAGTCTATCACAGTGGTG 60.564 48.000 19.33 0.00 46.66 4.17
2233 2301 9.490379 CATTAACATAGGGTTACAGTATCCTTC 57.510 37.037 7.50 0.00 41.55 3.46
2274 2344 2.936202 ACAGTTCAGGATGTGCAAGTT 58.064 42.857 0.00 0.00 37.40 2.66
2279 2349 2.813754 TGCTTTACAGTTCAGGATGTGC 59.186 45.455 0.00 0.00 37.40 4.57
2395 2465 2.424246 AGCAAGACTAGCTCGAGTAACC 59.576 50.000 15.13 0.00 38.01 2.85
2646 2802 2.706723 TGAACTGTGGCCTTGTAGGTTA 59.293 45.455 3.32 0.00 37.80 2.85
2745 2901 1.595093 GGATTGGTGTTTCGCAGGGG 61.595 60.000 0.00 0.00 0.00 4.79
2806 3060 1.881973 GCACTCTCAATTGCACCTTCA 59.118 47.619 0.00 0.00 38.68 3.02
2865 3119 2.360165 GAGCGATTAGTTTACGGAGGGA 59.640 50.000 0.00 0.00 0.00 4.20
2866 3120 2.361438 AGAGCGATTAGTTTACGGAGGG 59.639 50.000 0.00 0.00 0.00 4.30
2867 3121 3.712091 AGAGCGATTAGTTTACGGAGG 57.288 47.619 0.00 0.00 0.00 4.30
2868 3122 8.967552 AATATAAGAGCGATTAGTTTACGGAG 57.032 34.615 0.00 0.00 0.00 4.63
2870 3124 9.837525 ACTAATATAAGAGCGATTAGTTTACGG 57.162 33.333 0.00 0.00 41.44 4.02
2879 3133 9.915629 CCTCTGTAAACTAATATAAGAGCGATT 57.084 33.333 0.00 0.00 0.00 3.34
2880 3134 8.524487 CCCTCTGTAAACTAATATAAGAGCGAT 58.476 37.037 0.00 0.00 0.00 4.58
2881 3135 7.722728 TCCCTCTGTAAACTAATATAAGAGCGA 59.277 37.037 0.00 0.00 0.00 4.93
2882 3136 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
2883 3137 8.862085 ACTCCCTCTGTAAACTAATATAAGAGC 58.138 37.037 0.00 0.00 0.00 4.09
2889 3143 9.503369 AAAGGTACTCCCTCTGTAAACTAATAT 57.497 33.333 0.00 0.00 45.47 1.28
2890 3144 8.755977 CAAAGGTACTCCCTCTGTAAACTAATA 58.244 37.037 0.00 0.00 45.47 0.98
2891 3145 7.456902 TCAAAGGTACTCCCTCTGTAAACTAAT 59.543 37.037 0.00 0.00 45.47 1.73
2892 3146 6.783977 TCAAAGGTACTCCCTCTGTAAACTAA 59.216 38.462 0.00 0.00 45.47 2.24
2893 3147 6.317312 TCAAAGGTACTCCCTCTGTAAACTA 58.683 40.000 0.00 0.00 45.47 2.24
2894 3148 5.152934 TCAAAGGTACTCCCTCTGTAAACT 58.847 41.667 0.00 0.00 45.47 2.66
2895 3149 5.479124 TCAAAGGTACTCCCTCTGTAAAC 57.521 43.478 0.00 0.00 45.47 2.01
2896 3150 6.503560 TTTCAAAGGTACTCCCTCTGTAAA 57.496 37.500 0.00 0.00 45.47 2.01
2897 3151 6.503560 TTTTCAAAGGTACTCCCTCTGTAA 57.496 37.500 0.00 0.00 45.47 2.41
2898 3152 6.110411 CTTTTCAAAGGTACTCCCTCTGTA 57.890 41.667 0.00 0.00 45.47 2.74
2899 3153 4.974399 CTTTTCAAAGGTACTCCCTCTGT 58.026 43.478 0.00 0.00 45.47 3.41
2927 3181 1.219124 GCAGCGAGGACCAGATGAA 59.781 57.895 9.06 0.00 0.00 2.57
2940 3204 1.008538 GAACCCAGTTTGTGCAGCG 60.009 57.895 0.00 0.00 0.00 5.18
2942 3206 0.670162 CCAGAACCCAGTTTGTGCAG 59.330 55.000 0.00 0.00 0.00 4.41
2956 3220 6.945435 TCTATGAACCAAAAAGCATACCAGAA 59.055 34.615 0.00 0.00 0.00 3.02
3048 3312 3.754965 ACAAACTGGAAGCTGCAAGATA 58.245 40.909 1.88 0.00 37.60 1.98
3185 3450 7.654520 GCAGAATGTATGGATGCAAAATATGTT 59.345 33.333 0.00 0.00 39.31 2.71
3646 3911 5.473039 CCGCTTGTATCATCTGATGTGATA 58.527 41.667 16.66 7.14 37.48 2.15
3665 3930 3.815401 GCATATGAAACAAGATACCCGCT 59.185 43.478 6.97 0.00 0.00 5.52
3666 3931 3.363970 CGCATATGAAACAAGATACCCGC 60.364 47.826 6.97 0.00 0.00 6.13
3669 3934 7.115805 TCGAATACGCATATGAAACAAGATACC 59.884 37.037 6.97 0.00 39.58 2.73
3688 3953 5.287992 GCCACAGTAAACTACAGTCGAATAC 59.712 44.000 0.00 0.00 0.00 1.89
3707 3972 8.845413 AATAAAAAGATAGCAAAAATGCCACA 57.155 26.923 0.00 0.00 34.90 4.17
3790 4055 7.692908 TGTTCAAAACTATTTAAAGCAGCAC 57.307 32.000 0.00 0.00 0.00 4.40
3866 4131 0.397941 GATCAAGGATGCGATGGGGA 59.602 55.000 0.00 0.00 0.00 4.81
3930 4195 6.074463 CCAAAGTAAACTACACTCGTTGTCTC 60.074 42.308 0.00 0.00 39.91 3.36
3935 4200 5.280654 TCCCAAAGTAAACTACACTCGTT 57.719 39.130 0.00 0.00 0.00 3.85
3936 4201 4.942761 TCCCAAAGTAAACTACACTCGT 57.057 40.909 0.00 0.00 0.00 4.18
4096 4361 1.974197 GCCTTCCCTTCCTCTCTCCAT 60.974 57.143 0.00 0.00 0.00 3.41
4123 4388 0.320073 TAAACAGAACGCCAGGGACG 60.320 55.000 0.00 0.00 0.00 4.79
4186 4451 1.081892 CATTCTCCAGAGCACGGTTG 58.918 55.000 0.00 0.00 0.00 3.77
4222 4487 2.190161 CCTCGATTCGTCGCAATAACA 58.810 47.619 5.89 0.00 0.00 2.41
4243 4508 3.118847 TGGTCCCGCGTATTGTTGTAATA 60.119 43.478 4.92 0.00 0.00 0.98
4252 4517 0.176449 GGTAGTTGGTCCCGCGTATT 59.824 55.000 4.92 0.00 0.00 1.89
4300 4565 0.679960 TGATCAAGAGGCGGTCGAGA 60.680 55.000 0.00 0.00 0.00 4.04
4352 4617 4.100808 GCACCTGATGTCTAAGATCTTCCT 59.899 45.833 12.24 0.00 0.00 3.36
4375 4640 3.741344 ACATTTCAACGTCTTCTTCCTCG 59.259 43.478 0.00 0.00 0.00 4.63
4456 4721 2.641305 GCAGAAGTGATCAGCTGGATT 58.359 47.619 15.13 0.00 37.56 3.01
4710 4975 7.324178 AGACTAATCTAAACGAGCAACAAGAT 58.676 34.615 0.00 0.00 31.46 2.40
4711 4976 6.688578 AGACTAATCTAAACGAGCAACAAGA 58.311 36.000 0.00 0.00 31.46 3.02
4734 4999 4.929808 AGGTAACAACATCTCACGCTTAAG 59.070 41.667 0.00 0.00 41.41 1.85
4735 5000 4.688879 CAGGTAACAACATCTCACGCTTAA 59.311 41.667 0.00 0.00 41.41 1.85
4747 5012 2.680841 GTGTGCTTGTCAGGTAACAACA 59.319 45.455 0.00 0.00 35.39 3.33
4798 5063 5.007234 CGAATTGTGAAGTCACCAGTTACAA 59.993 40.000 8.91 0.00 45.88 2.41
4805 5070 6.627395 AATAAACGAATTGTGAAGTCACCA 57.373 33.333 8.91 0.00 45.88 4.17
4842 5134 9.665719 ACATATAAACTGATGACACACACATAA 57.334 29.630 0.00 0.00 0.00 1.90
4843 5135 9.665719 AACATATAAACTGATGACACACACATA 57.334 29.630 0.00 0.00 0.00 2.29
4844 5136 8.453320 CAACATATAAACTGATGACACACACAT 58.547 33.333 0.00 0.00 0.00 3.21
4845 5137 7.443879 ACAACATATAAACTGATGACACACACA 59.556 33.333 0.00 0.00 0.00 3.72
4846 5138 7.806690 ACAACATATAAACTGATGACACACAC 58.193 34.615 0.00 0.00 0.00 3.82
4847 5139 7.977789 ACAACATATAAACTGATGACACACA 57.022 32.000 0.00 0.00 0.00 3.72
5094 5386 7.498443 ACTAATTTTAACCTAGGGATCTGTCG 58.502 38.462 14.81 0.00 0.00 4.35
5095 5387 9.682465 AAACTAATTTTAACCTAGGGATCTGTC 57.318 33.333 14.81 0.00 0.00 3.51
5096 5388 9.462606 CAAACTAATTTTAACCTAGGGATCTGT 57.537 33.333 14.81 0.00 0.00 3.41
5097 5389 9.681062 TCAAACTAATTTTAACCTAGGGATCTG 57.319 33.333 14.81 0.00 0.00 2.90
5106 5398 9.596308 ACCCATAGTTCAAACTAATTTTAACCT 57.404 29.630 6.70 0.00 44.03 3.50
5112 5404 9.869757 GCATAAACCCATAGTTCAAACTAATTT 57.130 29.630 6.70 7.85 44.03 1.82
5113 5405 8.474831 GGCATAAACCCATAGTTCAAACTAATT 58.525 33.333 6.70 1.80 44.03 1.40
5114 5406 7.617723 TGGCATAAACCCATAGTTCAAACTAAT 59.382 33.333 6.70 0.00 44.03 1.73
5115 5407 6.948886 TGGCATAAACCCATAGTTCAAACTAA 59.051 34.615 6.70 0.00 44.03 2.24
5116 5408 6.486056 TGGCATAAACCCATAGTTCAAACTA 58.514 36.000 5.15 5.15 44.84 2.24
5117 5409 5.329399 TGGCATAAACCCATAGTTCAAACT 58.671 37.500 0.46 0.46 37.88 2.66
5118 5410 5.652994 TGGCATAAACCCATAGTTCAAAC 57.347 39.130 0.00 0.00 37.88 2.93
5126 5418 5.639139 TGCATTCTATGGCATAAACCCATA 58.361 37.500 8.79 0.00 42.78 2.74
5127 5419 4.482030 TGCATTCTATGGCATAAACCCAT 58.518 39.130 8.79 0.00 44.85 4.00
5128 5420 3.908476 TGCATTCTATGGCATAAACCCA 58.092 40.909 8.79 0.26 34.58 4.51
5136 5428 4.466827 AGTTCATCATGCATTCTATGGCA 58.533 39.130 0.00 0.00 45.23 4.92
5137 5429 4.082895 GGAGTTCATCATGCATTCTATGGC 60.083 45.833 0.00 0.00 0.00 4.40
5138 5430 4.153655 CGGAGTTCATCATGCATTCTATGG 59.846 45.833 0.00 0.00 0.00 2.74
5139 5431 4.992951 TCGGAGTTCATCATGCATTCTATG 59.007 41.667 0.00 1.59 0.00 2.23
5140 5432 5.219343 TCGGAGTTCATCATGCATTCTAT 57.781 39.130 0.00 0.00 0.00 1.98
5141 5433 4.670896 TCGGAGTTCATCATGCATTCTA 57.329 40.909 0.00 0.00 0.00 2.10
5142 5434 3.548745 TCGGAGTTCATCATGCATTCT 57.451 42.857 0.00 0.00 0.00 2.40
5143 5435 3.058432 CCATCGGAGTTCATCATGCATTC 60.058 47.826 0.00 0.00 0.00 2.67
5144 5436 2.882761 CCATCGGAGTTCATCATGCATT 59.117 45.455 0.00 0.00 0.00 3.56
5145 5437 2.158711 ACCATCGGAGTTCATCATGCAT 60.159 45.455 0.00 0.00 0.00 3.96
5146 5438 1.210234 ACCATCGGAGTTCATCATGCA 59.790 47.619 0.00 0.00 0.00 3.96
5147 5439 1.600957 CACCATCGGAGTTCATCATGC 59.399 52.381 0.00 0.00 0.00 4.06
5148 5440 2.216046 CCACCATCGGAGTTCATCATG 58.784 52.381 0.00 0.00 0.00 3.07
5149 5441 1.839994 ACCACCATCGGAGTTCATCAT 59.160 47.619 0.00 0.00 0.00 2.45
5150 5442 1.066215 CACCACCATCGGAGTTCATCA 60.066 52.381 0.00 0.00 0.00 3.07
5151 5443 1.656652 CACCACCATCGGAGTTCATC 58.343 55.000 0.00 0.00 0.00 2.92
5152 5444 0.392998 GCACCACCATCGGAGTTCAT 60.393 55.000 0.00 0.00 0.00 2.57
5153 5445 1.003839 GCACCACCATCGGAGTTCA 60.004 57.895 0.00 0.00 0.00 3.18
5154 5446 0.741221 GAGCACCACCATCGGAGTTC 60.741 60.000 0.00 0.00 0.00 3.01
5155 5447 1.194781 AGAGCACCACCATCGGAGTT 61.195 55.000 0.00 0.00 0.00 3.01
5156 5448 0.324368 TAGAGCACCACCATCGGAGT 60.324 55.000 0.00 0.00 0.00 3.85
5157 5449 0.824109 TTAGAGCACCACCATCGGAG 59.176 55.000 0.00 0.00 0.00 4.63
5158 5450 1.066430 GTTTAGAGCACCACCATCGGA 60.066 52.381 0.00 0.00 0.00 4.55
5159 5451 1.066143 AGTTTAGAGCACCACCATCGG 60.066 52.381 0.00 0.00 0.00 4.18
5160 5452 2.386661 AGTTTAGAGCACCACCATCG 57.613 50.000 0.00 0.00 0.00 3.84
5161 5453 3.821033 ACAAAGTTTAGAGCACCACCATC 59.179 43.478 0.00 0.00 0.00 3.51
5162 5454 3.832527 ACAAAGTTTAGAGCACCACCAT 58.167 40.909 0.00 0.00 0.00 3.55
5163 5455 3.290948 ACAAAGTTTAGAGCACCACCA 57.709 42.857 0.00 0.00 0.00 4.17
5164 5456 4.213482 CACTACAAAGTTTAGAGCACCACC 59.787 45.833 0.00 0.00 31.97 4.61
5165 5457 4.319549 GCACTACAAAGTTTAGAGCACCAC 60.320 45.833 3.73 0.00 34.40 4.16
5166 5458 3.813166 GCACTACAAAGTTTAGAGCACCA 59.187 43.478 3.73 0.00 34.40 4.17
5167 5459 3.120649 CGCACTACAAAGTTTAGAGCACC 60.121 47.826 8.07 0.00 34.02 5.01
5168 5460 3.739300 TCGCACTACAAAGTTTAGAGCAC 59.261 43.478 8.07 0.00 34.02 4.40
5169 5461 3.985008 TCGCACTACAAAGTTTAGAGCA 58.015 40.909 8.07 0.00 34.02 4.26
5170 5462 4.985044 TTCGCACTACAAAGTTTAGAGC 57.015 40.909 0.00 0.00 31.97 4.09
5171 5463 7.572759 TGATTTTCGCACTACAAAGTTTAGAG 58.427 34.615 0.00 0.00 31.97 2.43
5172 5464 7.485418 TGATTTTCGCACTACAAAGTTTAGA 57.515 32.000 0.00 0.00 31.97 2.10
5173 5465 8.728088 AATGATTTTCGCACTACAAAGTTTAG 57.272 30.769 0.00 0.00 31.97 1.85
5174 5466 9.522804 AAAATGATTTTCGCACTACAAAGTTTA 57.477 25.926 0.00 0.00 31.97 2.01
5175 5467 8.419076 AAAATGATTTTCGCACTACAAAGTTT 57.581 26.923 0.00 0.00 31.97 2.66
5176 5468 9.522804 TTAAAATGATTTTCGCACTACAAAGTT 57.477 25.926 6.40 0.00 31.83 2.66
5177 5469 9.522804 TTTAAAATGATTTTCGCACTACAAAGT 57.477 25.926 6.40 0.00 33.33 2.66
5180 5472 9.906660 AGATTTAAAATGATTTTCGCACTACAA 57.093 25.926 6.40 0.00 34.19 2.41
5181 5473 9.340695 CAGATTTAAAATGATTTTCGCACTACA 57.659 29.630 6.40 0.00 34.19 2.74
5182 5474 8.313931 GCAGATTTAAAATGATTTTCGCACTAC 58.686 33.333 6.40 0.00 34.19 2.73
5183 5475 8.026026 TGCAGATTTAAAATGATTTTCGCACTA 58.974 29.630 6.40 0.00 34.19 2.74
5184 5476 6.867816 TGCAGATTTAAAATGATTTTCGCACT 59.132 30.769 6.40 1.29 34.19 4.40
5185 5477 7.048000 TGCAGATTTAAAATGATTTTCGCAC 57.952 32.000 6.40 0.00 34.19 5.34
5186 5478 6.867816 ACTGCAGATTTAAAATGATTTTCGCA 59.132 30.769 23.35 6.93 34.19 5.10
5187 5479 7.281991 ACTGCAGATTTAAAATGATTTTCGC 57.718 32.000 23.35 3.01 34.19 4.70
5188 5480 8.798153 GGTACTGCAGATTTAAAATGATTTTCG 58.202 33.333 23.35 0.00 34.19 3.46
5189 5481 8.798153 CGGTACTGCAGATTTAAAATGATTTTC 58.202 33.333 23.35 0.00 34.19 2.29
5190 5482 8.303876 ACGGTACTGCAGATTTAAAATGATTTT 58.696 29.630 23.35 8.35 36.67 1.82
5191 5483 7.826690 ACGGTACTGCAGATTTAAAATGATTT 58.173 30.769 23.35 0.00 0.00 2.17
5192 5484 7.391148 ACGGTACTGCAGATTTAAAATGATT 57.609 32.000 23.35 0.00 0.00 2.57
5193 5485 7.391148 AACGGTACTGCAGATTTAAAATGAT 57.609 32.000 23.35 0.00 0.00 2.45
5194 5486 6.811253 AACGGTACTGCAGATTTAAAATGA 57.189 33.333 23.35 0.00 0.00 2.57
5195 5487 7.867445 AAAACGGTACTGCAGATTTAAAATG 57.133 32.000 23.35 2.49 0.00 2.32
5196 5488 9.620660 CTAAAAACGGTACTGCAGATTTAAAAT 57.379 29.630 23.35 0.00 0.00 1.82
5197 5489 7.592164 GCTAAAAACGGTACTGCAGATTTAAAA 59.408 33.333 23.35 0.00 0.00 1.52
5198 5490 7.079475 GCTAAAAACGGTACTGCAGATTTAAA 58.921 34.615 23.35 0.00 0.00 1.52
5199 5491 6.205076 TGCTAAAAACGGTACTGCAGATTTAA 59.795 34.615 23.35 0.00 0.00 1.52
5200 5492 5.701750 TGCTAAAAACGGTACTGCAGATTTA 59.298 36.000 23.35 11.69 0.00 1.40
5201 5493 4.517453 TGCTAAAAACGGTACTGCAGATTT 59.483 37.500 23.35 9.47 0.00 2.17
5202 5494 4.069304 TGCTAAAAACGGTACTGCAGATT 58.931 39.130 23.35 0.27 0.00 2.40
5203 5495 3.670625 TGCTAAAAACGGTACTGCAGAT 58.329 40.909 23.35 7.41 0.00 2.90
5204 5496 3.114668 TGCTAAAAACGGTACTGCAGA 57.885 42.857 23.35 0.48 0.00 4.26
5205 5497 5.523916 AGATATGCTAAAAACGGTACTGCAG 59.476 40.000 13.48 13.48 32.42 4.41
5206 5498 5.293324 CAGATATGCTAAAAACGGTACTGCA 59.707 40.000 0.23 0.00 0.00 4.41
5207 5499 5.293569 ACAGATATGCTAAAAACGGTACTGC 59.706 40.000 0.23 0.00 0.00 4.40
5208 5500 6.903883 ACAGATATGCTAAAAACGGTACTG 57.096 37.500 0.00 0.00 0.00 2.74
5209 5501 7.277981 CAGAACAGATATGCTAAAAACGGTACT 59.722 37.037 0.00 0.00 0.00 2.73
5210 5502 7.399523 CAGAACAGATATGCTAAAAACGGTAC 58.600 38.462 0.00 0.00 0.00 3.34
5211 5503 6.036735 GCAGAACAGATATGCTAAAAACGGTA 59.963 38.462 0.00 0.00 37.00 4.02
5212 5504 5.163754 GCAGAACAGATATGCTAAAAACGGT 60.164 40.000 0.00 0.00 37.00 4.83
5213 5505 5.266242 GCAGAACAGATATGCTAAAAACGG 58.734 41.667 0.00 0.00 37.00 4.44
5214 5506 5.266242 GGCAGAACAGATATGCTAAAAACG 58.734 41.667 0.00 0.00 39.88 3.60
5215 5507 5.163754 ACGGCAGAACAGATATGCTAAAAAC 60.164 40.000 0.00 0.00 39.88 2.43
5216 5508 4.941263 ACGGCAGAACAGATATGCTAAAAA 59.059 37.500 0.00 0.00 39.88 1.94
5217 5509 4.332543 CACGGCAGAACAGATATGCTAAAA 59.667 41.667 0.00 0.00 39.88 1.52
5218 5510 3.871006 CACGGCAGAACAGATATGCTAAA 59.129 43.478 0.00 0.00 39.88 1.85
5219 5511 3.457234 CACGGCAGAACAGATATGCTAA 58.543 45.455 0.00 0.00 39.88 3.09
5220 5512 2.803133 GCACGGCAGAACAGATATGCTA 60.803 50.000 0.00 0.00 39.88 3.49
5221 5513 1.945387 CACGGCAGAACAGATATGCT 58.055 50.000 0.00 0.00 39.88 3.79
5222 5514 0.305922 GCACGGCAGAACAGATATGC 59.694 55.000 0.00 0.00 39.25 3.14
5223 5515 0.940126 GGCACGGCAGAACAGATATG 59.060 55.000 0.00 0.00 0.00 1.78
5224 5516 3.386543 GGCACGGCAGAACAGATAT 57.613 52.632 0.00 0.00 0.00 1.63
5225 5517 4.932789 GGCACGGCAGAACAGATA 57.067 55.556 0.00 0.00 0.00 1.98
5238 5530 2.920869 CGATATCACGCACGGCAC 59.079 61.111 3.12 0.00 0.00 5.01
5246 5538 4.437858 AAAACGAATCTGCGATATCACG 57.562 40.909 3.12 0.00 34.83 4.35
5247 5539 6.614580 GCTCTAAAACGAATCTGCGATATCAC 60.615 42.308 3.12 0.00 34.83 3.06
5248 5540 5.402568 GCTCTAAAACGAATCTGCGATATCA 59.597 40.000 3.12 0.00 34.83 2.15
5249 5541 5.402568 TGCTCTAAAACGAATCTGCGATATC 59.597 40.000 0.00 0.00 34.83 1.63
5250 5542 5.289595 TGCTCTAAAACGAATCTGCGATAT 58.710 37.500 0.00 0.00 34.83 1.63
5251 5543 4.678622 TGCTCTAAAACGAATCTGCGATA 58.321 39.130 0.00 0.00 34.83 2.92
5252 5544 3.521560 TGCTCTAAAACGAATCTGCGAT 58.478 40.909 0.00 0.00 34.83 4.58
5253 5545 2.954316 TGCTCTAAAACGAATCTGCGA 58.046 42.857 0.00 0.00 34.83 5.10
5254 5546 3.933155 ATGCTCTAAAACGAATCTGCG 57.067 42.857 0.00 0.00 37.29 5.18
5255 5547 5.502606 GGTAATGCTCTAAAACGAATCTGC 58.497 41.667 0.00 0.00 0.00 4.26
5256 5548 5.728255 CGGTAATGCTCTAAAACGAATCTG 58.272 41.667 0.00 0.00 0.00 2.90
5257 5549 4.270325 GCGGTAATGCTCTAAAACGAATCT 59.730 41.667 0.00 0.00 0.00 2.40
5258 5550 4.033587 TGCGGTAATGCTCTAAAACGAATC 59.966 41.667 0.00 0.00 35.36 2.52
5259 5551 3.936453 TGCGGTAATGCTCTAAAACGAAT 59.064 39.130 0.00 0.00 35.36 3.34
5260 5552 3.327626 TGCGGTAATGCTCTAAAACGAA 58.672 40.909 0.00 0.00 35.36 3.85
5261 5553 2.927477 CTGCGGTAATGCTCTAAAACGA 59.073 45.455 0.00 0.00 35.36 3.85
5262 5554 2.927477 TCTGCGGTAATGCTCTAAAACG 59.073 45.455 0.00 0.00 35.36 3.60
5263 5555 3.241995 CGTCTGCGGTAATGCTCTAAAAC 60.242 47.826 0.00 0.00 35.36 2.43
5264 5556 2.927477 CGTCTGCGGTAATGCTCTAAAA 59.073 45.455 0.00 0.00 35.36 1.52
5265 5557 2.164827 TCGTCTGCGGTAATGCTCTAAA 59.835 45.455 0.00 0.00 38.89 1.85
5266 5558 1.746787 TCGTCTGCGGTAATGCTCTAA 59.253 47.619 0.00 0.00 38.89 2.10
5267 5559 1.385528 TCGTCTGCGGTAATGCTCTA 58.614 50.000 0.00 0.00 38.89 2.43
5268 5560 0.530744 TTCGTCTGCGGTAATGCTCT 59.469 50.000 0.00 0.00 38.89 4.09
5269 5561 1.355971 TTTCGTCTGCGGTAATGCTC 58.644 50.000 0.00 0.00 38.89 4.26
5270 5562 2.024176 ATTTCGTCTGCGGTAATGCT 57.976 45.000 0.00 0.00 38.89 3.79
5271 5563 2.825086 AATTTCGTCTGCGGTAATGC 57.175 45.000 0.00 0.00 38.89 3.56
5272 5564 4.260670 CGTAAATTTCGTCTGCGGTAATG 58.739 43.478 0.00 0.00 38.89 1.90
5273 5565 3.307782 CCGTAAATTTCGTCTGCGGTAAT 59.692 43.478 0.00 0.00 38.89 1.89
5274 5566 2.667481 CCGTAAATTTCGTCTGCGGTAA 59.333 45.455 0.00 0.00 38.89 2.85
5275 5567 2.261345 CCGTAAATTTCGTCTGCGGTA 58.739 47.619 0.00 0.00 38.89 4.02
5276 5568 1.073177 CCGTAAATTTCGTCTGCGGT 58.927 50.000 0.00 0.00 38.89 5.68
5277 5569 1.073177 ACCGTAAATTTCGTCTGCGG 58.927 50.000 0.00 0.00 42.86 5.69
5278 5570 2.284063 CGTACCGTAAATTTCGTCTGCG 60.284 50.000 0.00 0.00 39.92 5.18
5279 5571 2.533561 GCGTACCGTAAATTTCGTCTGC 60.534 50.000 0.00 0.00 0.00 4.26
5280 5572 2.662637 TGCGTACCGTAAATTTCGTCTG 59.337 45.455 0.00 0.00 0.00 3.51
5281 5573 2.945278 TGCGTACCGTAAATTTCGTCT 58.055 42.857 0.00 0.00 0.00 4.18
5282 5574 3.549070 AGATGCGTACCGTAAATTTCGTC 59.451 43.478 0.00 0.00 0.00 4.20
5283 5575 3.514645 AGATGCGTACCGTAAATTTCGT 58.485 40.909 0.00 0.00 0.00 3.85
5284 5576 4.260670 CAAGATGCGTACCGTAAATTTCG 58.739 43.478 0.00 0.00 0.00 3.46
5285 5577 4.026407 GCAAGATGCGTACCGTAAATTTC 58.974 43.478 0.00 0.00 31.71 2.17
5286 5578 4.011058 GCAAGATGCGTACCGTAAATTT 57.989 40.909 0.00 0.00 31.71 1.82
5287 5579 3.668596 GCAAGATGCGTACCGTAAATT 57.331 42.857 0.00 0.00 31.71 1.82
5298 5590 7.037370 GCTTAATCCCTAAGAGCAAGATGCG 62.037 48.000 0.00 0.00 41.88 4.73
5299 5591 4.215185 GCTTAATCCCTAAGAGCAAGATGC 59.785 45.833 0.00 0.00 39.66 3.91
5300 5592 5.469421 CAGCTTAATCCCTAAGAGCAAGATG 59.531 44.000 0.00 0.00 39.66 2.90
5301 5593 5.619220 CAGCTTAATCCCTAAGAGCAAGAT 58.381 41.667 0.00 0.00 39.66 2.40
5302 5594 4.684485 GCAGCTTAATCCCTAAGAGCAAGA 60.684 45.833 0.00 0.00 39.66 3.02
5303 5595 3.563390 GCAGCTTAATCCCTAAGAGCAAG 59.437 47.826 0.00 0.00 39.66 4.01
5304 5596 3.054434 TGCAGCTTAATCCCTAAGAGCAA 60.054 43.478 0.00 0.00 42.38 3.91
5305 5597 2.505407 TGCAGCTTAATCCCTAAGAGCA 59.495 45.455 0.00 7.53 42.75 4.26
5306 5598 3.137533 CTGCAGCTTAATCCCTAAGAGC 58.862 50.000 0.00 0.00 39.66 4.09
5307 5599 3.137533 GCTGCAGCTTAATCCCTAAGAG 58.862 50.000 31.33 0.00 39.66 2.85
5308 5600 3.199880 GCTGCAGCTTAATCCCTAAGA 57.800 47.619 31.33 0.00 39.66 2.10
5328 5620 0.669318 TTTCTGCACGGCCGTTCTAG 60.669 55.000 32.11 25.32 0.00 2.43
5345 5637 3.159213 TCCAAGGACACATGCTGATTT 57.841 42.857 0.00 0.00 0.00 2.17
5348 5640 2.189594 CTTCCAAGGACACATGCTGA 57.810 50.000 0.00 0.00 0.00 4.26
5369 5661 3.690139 TGCGGTTTGAGACACTTTTTACA 59.310 39.130 0.00 0.00 0.00 2.41
5403 5760 3.057548 CGGCCAGCAGCATGTCAA 61.058 61.111 2.24 0.00 46.50 3.18
5425 5782 3.740631 TCCATGATTCAGATCAGACCG 57.259 47.619 0.00 0.00 45.01 4.79
5454 5984 6.051717 TCAAATCCTATTTCTCAGCTACTGC 58.948 40.000 0.00 0.00 40.05 4.40
5466 5996 5.537674 GGGCAGATGTGATCAAATCCTATTT 59.462 40.000 20.33 0.83 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.