Multiple sequence alignment - TraesCS2A01G186200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G186200 chr2A 100.000 4034 0 0 1 4034 147551547 147547514 0.000000e+00 7450.0
1 TraesCS2A01G186200 chr2A 78.342 1930 382 32 1057 2967 74775840 74777752 0.000000e+00 1216.0
2 TraesCS2A01G186200 chr2A 77.504 1987 393 41 1015 2962 74765523 74767494 0.000000e+00 1144.0
3 TraesCS2A01G186200 chr2A 78.028 1511 304 27 1454 2951 74780256 74781751 0.000000e+00 926.0
4 TraesCS2A01G186200 chr2A 91.241 411 32 3 3627 4034 77260015 77260424 1.270000e-154 556.0
5 TraesCS2A01G186200 chr2A 77.381 840 180 9 2127 2961 43286257 43285423 1.300000e-134 490.0
6 TraesCS2A01G186200 chr2A 88.679 106 11 1 3062 3167 765591829 765591933 1.180000e-25 128.0
7 TraesCS2A01G186200 chr2D 95.935 3272 112 12 366 3626 153271455 153274716 0.000000e+00 5286.0
8 TraesCS2A01G186200 chr2D 78.494 1925 378 31 1064 2967 74991429 74993338 0.000000e+00 1229.0
9 TraesCS2A01G186200 chr2D 78.594 1579 295 29 1315 2883 74995358 74996903 0.000000e+00 1003.0
10 TraesCS2A01G186200 chr2D 77.446 838 183 5 2127 2961 38217567 38216733 2.800000e-136 496.0
11 TraesCS2A01G186200 chr2D 90.299 134 11 2 1 132 141323142 141323009 1.490000e-39 174.0
12 TraesCS2A01G186200 chr2D 90.625 128 10 2 7 132 353573290 353573163 6.930000e-38 169.0
13 TraesCS2A01G186200 chr2B 94.969 2723 125 5 348 3061 211152568 211155287 0.000000e+00 4259.0
14 TraesCS2A01G186200 chr2B 77.965 1838 354 32 1057 2855 132511718 132509893 0.000000e+00 1103.0
15 TraesCS2A01G186200 chr2B 78.609 762 155 8 2194 2951 114502169 114502926 7.790000e-137 497.0
16 TraesCS2A01G186200 chr2B 78.393 759 158 6 1341 2096 114501415 114502170 4.690000e-134 488.0
17 TraesCS2A01G186200 chr2B 79.159 547 101 12 1064 1599 114643822 114644366 2.290000e-97 366.0
18 TraesCS2A01G186200 chr2B 79.733 375 74 2 2252 2625 66958764 66958391 1.850000e-68 270.0
19 TraesCS2A01G186200 chr2B 90.286 175 17 0 130 304 211127963 211128137 3.140000e-56 230.0
20 TraesCS2A01G186200 chr2B 89.552 134 12 2 1 132 528241647 528241514 6.930000e-38 169.0
21 TraesCS2A01G186200 chr7D 78.453 1991 390 29 993 2965 47457612 47459581 0.000000e+00 1264.0
22 TraesCS2A01G186200 chr7A 78.471 1923 376 26 1057 2965 49987027 49985129 0.000000e+00 1223.0
23 TraesCS2A01G186200 chr7A 77.358 2014 414 30 1067 3062 49965645 49963656 0.000000e+00 1155.0
24 TraesCS2A01G186200 chr7A 91.045 134 10 2 1 132 693936594 693936461 3.200000e-41 180.0
25 TraesCS2A01G186200 chr4A 77.923 1993 399 26 992 2965 662149739 662147769 0.000000e+00 1205.0
26 TraesCS2A01G186200 chr4A 90.338 414 38 2 3621 4034 644218172 644217761 3.550000e-150 542.0
27 TraesCS2A01G186200 chr5A 92.402 408 30 1 3627 4034 347326967 347326561 7.520000e-162 580.0
28 TraesCS2A01G186200 chr1A 91.990 412 31 2 3624 4034 432224093 432224503 9.720000e-161 577.0
29 TraesCS2A01G186200 chr1B 91.463 410 34 1 3625 4034 603219642 603220050 2.720000e-156 562.0
30 TraesCS2A01G186200 chr3A 90.732 410 38 0 3625 4034 734516428 734516019 7.620000e-152 547.0
31 TraesCS2A01G186200 chr7B 90.534 412 39 0 3623 4034 327153157 327152746 2.740000e-151 545.0
32 TraesCS2A01G186200 chr7B 88.136 118 12 2 3062 3179 140851958 140851843 5.440000e-29 139.0
33 TraesCS2A01G186200 chr7B 86.441 118 15 1 3062 3179 711751279 711751395 1.180000e-25 128.0
34 TraesCS2A01G186200 chr7B 82.576 132 21 2 3062 3193 126083699 126083570 9.160000e-22 115.0
35 TraesCS2A01G186200 chr6A 90.511 411 37 2 3624 4034 147298229 147298637 3.550000e-150 542.0
36 TraesCS2A01G186200 chr6A 89.552 134 12 2 1 132 212035016 212034883 6.930000e-38 169.0
37 TraesCS2A01G186200 chr5B 90.511 411 38 1 3624 4034 474746110 474746519 3.550000e-150 542.0
38 TraesCS2A01G186200 chr5B 85.714 119 15 2 3062 3180 569109922 569109806 1.520000e-24 124.0
39 TraesCS2A01G186200 chr5B 85.714 119 14 2 3062 3180 569107607 569107492 5.480000e-24 122.0
40 TraesCS2A01G186200 chr4B 90.299 134 11 2 1 132 490323682 490323815 1.490000e-39 174.0
41 TraesCS2A01G186200 chr4B 89.313 131 12 2 1 129 398552630 398552760 3.230000e-36 163.0
42 TraesCS2A01G186200 chr4D 90.299 134 9 4 1 132 453243606 453243737 5.360000e-39 172.0
43 TraesCS2A01G186200 chr1D 88.235 136 13 2 1 133 100450213 100450348 4.170000e-35 159.0
44 TraesCS2A01G186200 chr5D 88.136 118 14 0 3062 3179 552044646 552044763 1.510000e-29 141.0
45 TraesCS2A01G186200 chr3D 87.736 106 13 0 3062 3167 49477765 49477870 1.520000e-24 124.0
46 TraesCS2A01G186200 chr6B 94.737 38 2 0 2930 2967 660254204 660254167 4.350000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G186200 chr2A 147547514 147551547 4033 True 7450.0 7450 100.000 1 4034 1 chr2A.!!$R2 4033
1 TraesCS2A01G186200 chr2A 74765523 74767494 1971 False 1144.0 1144 77.504 1015 2962 1 chr2A.!!$F1 1947
2 TraesCS2A01G186200 chr2A 74775840 74781751 5911 False 1071.0 1216 78.185 1057 2967 2 chr2A.!!$F4 1910
3 TraesCS2A01G186200 chr2A 43285423 43286257 834 True 490.0 490 77.381 2127 2961 1 chr2A.!!$R1 834
4 TraesCS2A01G186200 chr2D 153271455 153274716 3261 False 5286.0 5286 95.935 366 3626 1 chr2D.!!$F1 3260
5 TraesCS2A01G186200 chr2D 74991429 74996903 5474 False 1116.0 1229 78.544 1064 2967 2 chr2D.!!$F2 1903
6 TraesCS2A01G186200 chr2D 38216733 38217567 834 True 496.0 496 77.446 2127 2961 1 chr2D.!!$R1 834
7 TraesCS2A01G186200 chr2B 211152568 211155287 2719 False 4259.0 4259 94.969 348 3061 1 chr2B.!!$F3 2713
8 TraesCS2A01G186200 chr2B 132509893 132511718 1825 True 1103.0 1103 77.965 1057 2855 1 chr2B.!!$R2 1798
9 TraesCS2A01G186200 chr2B 114501415 114502926 1511 False 492.5 497 78.501 1341 2951 2 chr2B.!!$F4 1610
10 TraesCS2A01G186200 chr2B 114643822 114644366 544 False 366.0 366 79.159 1064 1599 1 chr2B.!!$F1 535
11 TraesCS2A01G186200 chr7D 47457612 47459581 1969 False 1264.0 1264 78.453 993 2965 1 chr7D.!!$F1 1972
12 TraesCS2A01G186200 chr7A 49985129 49987027 1898 True 1223.0 1223 78.471 1057 2965 1 chr7A.!!$R2 1908
13 TraesCS2A01G186200 chr7A 49963656 49965645 1989 True 1155.0 1155 77.358 1067 3062 1 chr7A.!!$R1 1995
14 TraesCS2A01G186200 chr4A 662147769 662149739 1970 True 1205.0 1205 77.923 992 2965 1 chr4A.!!$R2 1973

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 289 0.040781 CGGTTTGAAAATGCGTCGGT 60.041 50.0 0.00 0.0 0.0 4.69 F
331 332 0.392998 CGCATTAGTGGTGGCCTCTT 60.393 55.0 3.32 0.0 0.0 2.85 F
1890 1975 0.610174 TGATCTTGGCTCTCGTGCTT 59.390 50.0 0.00 0.0 0.0 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1974 2059 0.104855 CATCCTCCCAATCTTCGCGA 59.895 55.0 3.71 3.71 0.00 5.87 R
2323 2408 0.968405 TGAGGCCAATCCAAAGTTGC 59.032 50.0 5.01 0.00 37.29 4.17 R
3777 6183 0.100503 GGTTTGACGGTATGGCATGC 59.899 55.0 9.90 9.90 0.00 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 8.874745 TCTTCGTAAATTTTTAGCTCAATTCG 57.125 30.769 0.00 0.00 0.00 3.34
37 38 8.714179 TCTTCGTAAATTTTTAGCTCAATTCGA 58.286 29.630 0.00 0.00 0.00 3.71
38 39 8.874745 TTCGTAAATTTTTAGCTCAATTCGAG 57.125 30.769 0.00 1.80 45.37 4.04
39 40 8.246908 TCGTAAATTTTTAGCTCAATTCGAGA 57.753 30.769 0.00 0.00 45.45 4.04
40 41 8.714179 TCGTAAATTTTTAGCTCAATTCGAGAA 58.286 29.630 0.00 0.00 45.45 2.87
41 42 9.490663 CGTAAATTTTTAGCTCAATTCGAGAAT 57.509 29.630 0.00 0.00 45.45 2.40
52 53 9.565213 AGCTCAATTCGAGAATTTTTATTTCTG 57.435 29.630 8.21 0.00 45.45 3.02
53 54 8.316753 GCTCAATTCGAGAATTTTTATTTCTGC 58.683 33.333 8.21 1.10 45.45 4.26
54 55 9.345517 CTCAATTCGAGAATTTTTATTTCTGCA 57.654 29.630 8.21 0.00 45.45 4.41
55 56 9.128107 TCAATTCGAGAATTTTTATTTCTGCAC 57.872 29.630 8.21 0.00 38.84 4.57
56 57 8.914654 CAATTCGAGAATTTTTATTTCTGCACA 58.085 29.630 8.21 0.00 38.84 4.57
57 58 9.474920 AATTCGAGAATTTTTATTTCTGCACAA 57.525 25.926 5.32 0.00 37.74 3.33
58 59 8.864069 TTCGAGAATTTTTATTTCTGCACAAA 57.136 26.923 0.00 0.00 33.65 2.83
59 60 8.864069 TCGAGAATTTTTATTTCTGCACAAAA 57.136 26.923 0.00 0.00 33.65 2.44
60 61 9.307121 TCGAGAATTTTTATTTCTGCACAAAAA 57.693 25.926 0.00 0.00 33.65 1.94
61 62 9.356929 CGAGAATTTTTATTTCTGCACAAAAAC 57.643 29.630 0.00 0.00 33.93 2.43
66 67 8.941127 TTTTTATTTCTGCACAAAAACAACAC 57.059 26.923 0.00 0.00 0.00 3.32
67 68 6.654793 TTATTTCTGCACAAAAACAACACC 57.345 33.333 0.00 0.00 0.00 4.16
68 69 3.667497 TTCTGCACAAAAACAACACCA 57.333 38.095 0.00 0.00 0.00 4.17
69 70 3.883830 TCTGCACAAAAACAACACCAT 57.116 38.095 0.00 0.00 0.00 3.55
70 71 4.991153 TCTGCACAAAAACAACACCATA 57.009 36.364 0.00 0.00 0.00 2.74
71 72 4.930963 TCTGCACAAAAACAACACCATAG 58.069 39.130 0.00 0.00 0.00 2.23
72 73 3.452474 TGCACAAAAACAACACCATAGC 58.548 40.909 0.00 0.00 0.00 2.97
73 74 3.118992 TGCACAAAAACAACACCATAGCA 60.119 39.130 0.00 0.00 0.00 3.49
74 75 3.868077 GCACAAAAACAACACCATAGCAA 59.132 39.130 0.00 0.00 0.00 3.91
75 76 4.511082 GCACAAAAACAACACCATAGCAAT 59.489 37.500 0.00 0.00 0.00 3.56
76 77 5.007528 GCACAAAAACAACACCATAGCAATT 59.992 36.000 0.00 0.00 0.00 2.32
77 78 6.458070 GCACAAAAACAACACCATAGCAATTT 60.458 34.615 0.00 0.00 0.00 1.82
78 79 6.906143 CACAAAAACAACACCATAGCAATTTG 59.094 34.615 0.00 0.00 0.00 2.32
79 80 5.671742 AAAACAACACCATAGCAATTTGC 57.328 34.783 13.55 13.55 45.46 3.68
92 93 4.297944 GCAATTTGCTGAAAACATCGTC 57.702 40.909 14.11 0.00 40.96 4.20
93 94 3.735240 GCAATTTGCTGAAAACATCGTCA 59.265 39.130 14.11 0.00 40.96 4.35
94 95 4.143473 GCAATTTGCTGAAAACATCGTCAG 60.143 41.667 14.11 0.00 43.46 3.51
98 99 1.522668 CTGAAAACATCGTCAGCCCA 58.477 50.000 0.00 0.00 35.23 5.36
99 100 1.879380 CTGAAAACATCGTCAGCCCAA 59.121 47.619 0.00 0.00 35.23 4.12
100 101 1.879380 TGAAAACATCGTCAGCCCAAG 59.121 47.619 0.00 0.00 0.00 3.61
101 102 1.880027 GAAAACATCGTCAGCCCAAGT 59.120 47.619 0.00 0.00 0.00 3.16
102 103 1.981256 AAACATCGTCAGCCCAAGTT 58.019 45.000 0.00 0.00 0.00 2.66
103 104 2.851263 AACATCGTCAGCCCAAGTTA 57.149 45.000 0.00 0.00 0.00 2.24
104 105 2.386661 ACATCGTCAGCCCAAGTTAG 57.613 50.000 0.00 0.00 0.00 2.34
105 106 1.623811 ACATCGTCAGCCCAAGTTAGT 59.376 47.619 0.00 0.00 0.00 2.24
106 107 2.038557 ACATCGTCAGCCCAAGTTAGTT 59.961 45.455 0.00 0.00 0.00 2.24
107 108 2.450609 TCGTCAGCCCAAGTTAGTTC 57.549 50.000 0.00 0.00 0.00 3.01
108 109 1.001633 TCGTCAGCCCAAGTTAGTTCC 59.998 52.381 0.00 0.00 0.00 3.62
109 110 1.270625 CGTCAGCCCAAGTTAGTTCCA 60.271 52.381 0.00 0.00 0.00 3.53
110 111 2.615493 CGTCAGCCCAAGTTAGTTCCAT 60.615 50.000 0.00 0.00 0.00 3.41
111 112 3.421844 GTCAGCCCAAGTTAGTTCCATT 58.578 45.455 0.00 0.00 0.00 3.16
112 113 3.440522 GTCAGCCCAAGTTAGTTCCATTC 59.559 47.826 0.00 0.00 0.00 2.67
113 114 3.073798 TCAGCCCAAGTTAGTTCCATTCA 59.926 43.478 0.00 0.00 0.00 2.57
114 115 3.826157 CAGCCCAAGTTAGTTCCATTCAA 59.174 43.478 0.00 0.00 0.00 2.69
115 116 4.280677 CAGCCCAAGTTAGTTCCATTCAAA 59.719 41.667 0.00 0.00 0.00 2.69
116 117 5.047092 CAGCCCAAGTTAGTTCCATTCAAAT 60.047 40.000 0.00 0.00 0.00 2.32
117 118 5.185828 AGCCCAAGTTAGTTCCATTCAAATC 59.814 40.000 0.00 0.00 0.00 2.17
118 119 5.047377 GCCCAAGTTAGTTCCATTCAAATCA 60.047 40.000 0.00 0.00 0.00 2.57
119 120 6.351286 GCCCAAGTTAGTTCCATTCAAATCAT 60.351 38.462 0.00 0.00 0.00 2.45
120 121 7.147915 GCCCAAGTTAGTTCCATTCAAATCATA 60.148 37.037 0.00 0.00 0.00 2.15
121 122 8.190784 CCCAAGTTAGTTCCATTCAAATCATAC 58.809 37.037 0.00 0.00 0.00 2.39
122 123 8.739039 CCAAGTTAGTTCCATTCAAATCATACA 58.261 33.333 0.00 0.00 0.00 2.29
136 137 8.365399 TCAAATCATACAAATTAGAGTAGCCG 57.635 34.615 0.00 0.00 0.00 5.52
137 138 6.787085 AATCATACAAATTAGAGTAGCCGC 57.213 37.500 0.00 0.00 0.00 6.53
138 139 4.295870 TCATACAAATTAGAGTAGCCGCG 58.704 43.478 0.00 0.00 0.00 6.46
139 140 2.667473 ACAAATTAGAGTAGCCGCGT 57.333 45.000 4.92 0.00 0.00 6.01
140 141 2.268298 ACAAATTAGAGTAGCCGCGTG 58.732 47.619 4.92 0.00 0.00 5.34
141 142 2.268298 CAAATTAGAGTAGCCGCGTGT 58.732 47.619 4.92 0.00 0.00 4.49
142 143 2.667473 AATTAGAGTAGCCGCGTGTT 57.333 45.000 4.92 0.00 0.00 3.32
143 144 1.922570 ATTAGAGTAGCCGCGTGTTG 58.077 50.000 4.92 0.00 0.00 3.33
144 145 0.108992 TTAGAGTAGCCGCGTGTTGG 60.109 55.000 4.92 0.00 0.00 3.77
145 146 0.961857 TAGAGTAGCCGCGTGTTGGA 60.962 55.000 4.92 0.00 0.00 3.53
146 147 2.048503 AGTAGCCGCGTGTTGGAC 60.049 61.111 4.92 0.00 0.00 4.02
147 148 2.356553 GTAGCCGCGTGTTGGACA 60.357 61.111 4.92 0.00 0.00 4.02
148 149 2.048597 TAGCCGCGTGTTGGACAG 60.049 61.111 4.92 0.00 0.00 3.51
149 150 3.583276 TAGCCGCGTGTTGGACAGG 62.583 63.158 4.92 0.00 37.08 4.00
151 152 2.590575 CCGCGTGTTGGACAGGTT 60.591 61.111 4.92 0.00 36.45 3.50
152 153 2.604174 CCGCGTGTTGGACAGGTTC 61.604 63.158 4.92 0.00 36.45 3.62
153 154 2.935955 GCGTGTTGGACAGGTTCG 59.064 61.111 3.19 0.00 36.45 3.95
154 155 1.593209 GCGTGTTGGACAGGTTCGA 60.593 57.895 3.19 0.00 36.45 3.71
155 156 1.557443 GCGTGTTGGACAGGTTCGAG 61.557 60.000 3.19 0.00 36.45 4.04
156 157 1.557443 CGTGTTGGACAGGTTCGAGC 61.557 60.000 0.00 0.00 0.00 5.03
157 158 0.531974 GTGTTGGACAGGTTCGAGCA 60.532 55.000 0.53 0.00 0.00 4.26
158 159 0.396435 TGTTGGACAGGTTCGAGCAT 59.604 50.000 0.53 0.00 0.00 3.79
159 160 1.621317 TGTTGGACAGGTTCGAGCATA 59.379 47.619 0.53 0.00 0.00 3.14
160 161 2.236146 TGTTGGACAGGTTCGAGCATAT 59.764 45.455 0.53 0.00 0.00 1.78
161 162 2.866762 GTTGGACAGGTTCGAGCATATC 59.133 50.000 0.53 0.00 0.00 1.63
162 163 2.107366 TGGACAGGTTCGAGCATATCA 58.893 47.619 0.53 0.00 0.00 2.15
163 164 2.700371 TGGACAGGTTCGAGCATATCAT 59.300 45.455 0.53 0.00 0.00 2.45
164 165 3.895041 TGGACAGGTTCGAGCATATCATA 59.105 43.478 0.53 0.00 0.00 2.15
165 166 4.528206 TGGACAGGTTCGAGCATATCATAT 59.472 41.667 0.53 0.00 0.00 1.78
166 167 4.867047 GGACAGGTTCGAGCATATCATATG 59.133 45.833 0.53 0.00 0.00 1.78
167 168 5.336770 GGACAGGTTCGAGCATATCATATGA 60.337 44.000 9.00 8.10 0.00 2.15
168 169 6.291648 ACAGGTTCGAGCATATCATATGAT 57.708 37.500 21.50 21.50 38.51 2.45
169 170 6.705302 ACAGGTTCGAGCATATCATATGATT 58.295 36.000 22.84 5.42 36.05 2.57
170 171 6.592994 ACAGGTTCGAGCATATCATATGATTG 59.407 38.462 22.84 19.23 36.05 2.67
171 172 6.592994 CAGGTTCGAGCATATCATATGATTGT 59.407 38.462 22.84 10.05 36.05 2.71
172 173 7.118825 CAGGTTCGAGCATATCATATGATTGTT 59.881 37.037 22.84 17.01 36.05 2.83
173 174 7.663081 AGGTTCGAGCATATCATATGATTGTTT 59.337 33.333 22.84 12.64 36.05 2.83
174 175 8.292448 GGTTCGAGCATATCATATGATTGTTTT 58.708 33.333 22.84 6.36 36.05 2.43
175 176 9.669353 GTTCGAGCATATCATATGATTGTTTTT 57.331 29.630 22.84 5.37 36.05 1.94
199 200 4.629527 GCAAAACGGTTGCATTCTTAAG 57.370 40.909 18.07 0.00 44.34 1.85
200 201 3.121025 GCAAAACGGTTGCATTCTTAAGC 60.121 43.478 18.07 0.00 44.34 3.09
201 202 3.297830 AAACGGTTGCATTCTTAAGCC 57.702 42.857 0.00 0.00 0.00 4.35
202 203 1.173913 ACGGTTGCATTCTTAAGCCC 58.826 50.000 0.00 0.00 0.00 5.19
203 204 1.271926 ACGGTTGCATTCTTAAGCCCT 60.272 47.619 0.00 0.00 0.00 5.19
204 205 2.026636 ACGGTTGCATTCTTAAGCCCTA 60.027 45.455 0.00 0.00 0.00 3.53
205 206 3.214328 CGGTTGCATTCTTAAGCCCTAT 58.786 45.455 0.00 0.00 0.00 2.57
206 207 3.251004 CGGTTGCATTCTTAAGCCCTATC 59.749 47.826 0.00 0.00 0.00 2.08
207 208 4.207165 GGTTGCATTCTTAAGCCCTATCA 58.793 43.478 0.00 0.00 0.00 2.15
208 209 4.036852 GGTTGCATTCTTAAGCCCTATCAC 59.963 45.833 0.00 0.00 0.00 3.06
209 210 4.502105 TGCATTCTTAAGCCCTATCACA 57.498 40.909 0.00 0.00 0.00 3.58
210 211 4.199310 TGCATTCTTAAGCCCTATCACAC 58.801 43.478 0.00 0.00 0.00 3.82
211 212 4.199310 GCATTCTTAAGCCCTATCACACA 58.801 43.478 0.00 0.00 0.00 3.72
212 213 4.035675 GCATTCTTAAGCCCTATCACACAC 59.964 45.833 0.00 0.00 0.00 3.82
213 214 3.520290 TCTTAAGCCCTATCACACACG 57.480 47.619 0.00 0.00 0.00 4.49
214 215 2.167693 TCTTAAGCCCTATCACACACGG 59.832 50.000 0.00 0.00 0.00 4.94
215 216 1.563924 TAAGCCCTATCACACACGGT 58.436 50.000 0.00 0.00 0.00 4.83
216 217 0.690762 AAGCCCTATCACACACGGTT 59.309 50.000 0.00 0.00 0.00 4.44
217 218 1.563924 AGCCCTATCACACACGGTTA 58.436 50.000 0.00 0.00 0.00 2.85
218 219 2.116238 AGCCCTATCACACACGGTTAT 58.884 47.619 0.00 0.00 0.00 1.89
219 220 2.102588 AGCCCTATCACACACGGTTATC 59.897 50.000 0.00 0.00 0.00 1.75
220 221 2.159014 GCCCTATCACACACGGTTATCA 60.159 50.000 0.00 0.00 0.00 2.15
221 222 3.494398 GCCCTATCACACACGGTTATCAT 60.494 47.826 0.00 0.00 0.00 2.45
222 223 4.058124 CCCTATCACACACGGTTATCATG 58.942 47.826 0.00 0.00 0.00 3.07
223 224 4.442893 CCCTATCACACACGGTTATCATGT 60.443 45.833 0.00 0.00 0.00 3.21
224 225 5.221362 CCCTATCACACACGGTTATCATGTA 60.221 44.000 0.00 0.00 0.00 2.29
225 226 6.455647 CCTATCACACACGGTTATCATGTAT 58.544 40.000 0.00 0.00 0.00 2.29
226 227 6.586463 CCTATCACACACGGTTATCATGTATC 59.414 42.308 0.00 0.00 0.00 2.24
227 228 4.356289 TCACACACGGTTATCATGTATCG 58.644 43.478 0.00 0.00 0.00 2.92
228 229 4.109766 CACACACGGTTATCATGTATCGT 58.890 43.478 0.00 0.00 0.00 3.73
231 232 4.692371 CACGGTTATCATGTATCGTGTG 57.308 45.455 16.98 7.71 41.71 3.82
232 233 4.356289 CACGGTTATCATGTATCGTGTGA 58.644 43.478 16.98 0.00 41.71 3.58
233 234 4.441087 CACGGTTATCATGTATCGTGTGAG 59.559 45.833 16.98 0.09 41.71 3.51
234 235 4.337274 ACGGTTATCATGTATCGTGTGAGA 59.663 41.667 3.47 0.00 0.00 3.27
235 236 5.009710 ACGGTTATCATGTATCGTGTGAGAT 59.990 40.000 3.47 0.00 34.79 2.75
236 237 5.343325 CGGTTATCATGTATCGTGTGAGATG 59.657 44.000 0.00 0.00 32.39 2.90
237 238 6.447162 GGTTATCATGTATCGTGTGAGATGA 58.553 40.000 0.00 0.00 32.39 2.92
238 239 6.923508 GGTTATCATGTATCGTGTGAGATGAA 59.076 38.462 0.00 0.00 32.39 2.57
239 240 7.096023 GGTTATCATGTATCGTGTGAGATGAAC 60.096 40.741 0.00 0.00 32.39 3.18
240 241 4.682787 TCATGTATCGTGTGAGATGAACC 58.317 43.478 0.00 0.00 32.39 3.62
241 242 3.520290 TGTATCGTGTGAGATGAACCC 57.480 47.619 0.00 0.00 32.39 4.11
242 243 2.167693 TGTATCGTGTGAGATGAACCCC 59.832 50.000 0.00 0.00 32.39 4.95
243 244 0.541863 ATCGTGTGAGATGAACCCCC 59.458 55.000 0.00 0.00 0.00 5.40
258 259 3.613661 CCCCCATATTGCACACCTT 57.386 52.632 0.00 0.00 0.00 3.50
259 260 1.864669 CCCCCATATTGCACACCTTT 58.135 50.000 0.00 0.00 0.00 3.11
260 261 1.481772 CCCCCATATTGCACACCTTTG 59.518 52.381 0.00 0.00 0.00 2.77
261 262 2.178580 CCCCATATTGCACACCTTTGT 58.821 47.619 0.00 0.00 35.84 2.83
262 263 3.360867 CCCCATATTGCACACCTTTGTA 58.639 45.455 0.00 0.00 33.30 2.41
263 264 3.766591 CCCCATATTGCACACCTTTGTAA 59.233 43.478 0.00 0.00 33.30 2.41
264 265 4.142182 CCCCATATTGCACACCTTTGTAAG 60.142 45.833 0.00 0.00 33.30 2.34
272 273 2.359478 CCTTTGTAAGGCGGCGGT 60.359 61.111 9.78 0.00 42.78 5.68
273 274 1.969589 CCTTTGTAAGGCGGCGGTT 60.970 57.895 9.78 0.00 42.78 4.44
274 275 1.520600 CCTTTGTAAGGCGGCGGTTT 61.521 55.000 9.78 0.00 42.78 3.27
275 276 0.386731 CTTTGTAAGGCGGCGGTTTG 60.387 55.000 9.78 0.00 0.00 2.93
276 277 0.818445 TTTGTAAGGCGGCGGTTTGA 60.818 50.000 9.78 0.00 0.00 2.69
277 278 0.818445 TTGTAAGGCGGCGGTTTGAA 60.818 50.000 9.78 0.00 0.00 2.69
278 279 0.818445 TGTAAGGCGGCGGTTTGAAA 60.818 50.000 9.78 0.00 0.00 2.69
279 280 0.311477 GTAAGGCGGCGGTTTGAAAA 59.689 50.000 9.78 0.00 0.00 2.29
280 281 1.068125 GTAAGGCGGCGGTTTGAAAAT 60.068 47.619 9.78 0.00 0.00 1.82
281 282 0.319469 AAGGCGGCGGTTTGAAAATG 60.319 50.000 9.78 0.00 0.00 2.32
282 283 2.379634 GGCGGCGGTTTGAAAATGC 61.380 57.895 9.78 0.00 0.00 3.56
283 284 2.715849 GCGGCGGTTTGAAAATGCG 61.716 57.895 9.78 0.00 0.00 4.73
284 285 1.371145 CGGCGGTTTGAAAATGCGT 60.371 52.632 0.00 0.00 0.00 5.24
285 286 1.334288 CGGCGGTTTGAAAATGCGTC 61.334 55.000 0.00 0.00 0.00 5.19
286 287 1.334288 GGCGGTTTGAAAATGCGTCG 61.334 55.000 0.00 0.00 0.00 5.12
287 288 1.334288 GCGGTTTGAAAATGCGTCGG 61.334 55.000 0.00 0.00 0.00 4.79
288 289 0.040781 CGGTTTGAAAATGCGTCGGT 60.041 50.000 0.00 0.00 0.00 4.69
289 290 1.598430 CGGTTTGAAAATGCGTCGGTT 60.598 47.619 0.00 0.00 0.00 4.44
290 291 2.465855 GGTTTGAAAATGCGTCGGTTT 58.534 42.857 0.00 0.00 0.00 3.27
291 292 3.630101 GGTTTGAAAATGCGTCGGTTTA 58.370 40.909 0.00 0.00 0.00 2.01
292 293 4.043073 GGTTTGAAAATGCGTCGGTTTAA 58.957 39.130 0.00 0.00 0.00 1.52
293 294 4.503370 GGTTTGAAAATGCGTCGGTTTAAA 59.497 37.500 0.00 0.00 0.00 1.52
294 295 5.417029 GTTTGAAAATGCGTCGGTTTAAAC 58.583 37.500 9.98 9.98 0.00 2.01
295 296 3.630101 TGAAAATGCGTCGGTTTAAACC 58.370 40.909 24.95 24.95 45.76 3.27
307 308 4.036567 GGTTTAAACCGTTTGCTTGACT 57.963 40.909 21.22 0.00 39.66 3.41
308 309 4.426416 GGTTTAAACCGTTTGCTTGACTT 58.574 39.130 21.22 0.00 39.66 3.01
309 310 5.580661 GGTTTAAACCGTTTGCTTGACTTA 58.419 37.500 21.22 0.00 39.66 2.24
310 311 6.035217 GGTTTAAACCGTTTGCTTGACTTAA 58.965 36.000 21.22 0.00 39.66 1.85
311 312 6.020440 GGTTTAAACCGTTTGCTTGACTTAAC 60.020 38.462 21.22 0.00 39.66 2.01
312 313 3.703286 AACCGTTTGCTTGACTTAACC 57.297 42.857 0.00 0.00 0.00 2.85
313 314 1.600485 ACCGTTTGCTTGACTTAACCG 59.400 47.619 0.00 0.00 0.00 4.44
314 315 1.662026 CCGTTTGCTTGACTTAACCGC 60.662 52.381 0.00 0.00 0.00 5.68
315 316 1.003331 CGTTTGCTTGACTTAACCGCA 60.003 47.619 0.00 0.00 0.00 5.69
316 317 2.350388 CGTTTGCTTGACTTAACCGCAT 60.350 45.455 0.00 0.00 0.00 4.73
317 318 3.638484 GTTTGCTTGACTTAACCGCATT 58.362 40.909 0.00 0.00 0.00 3.56
318 319 4.611807 CGTTTGCTTGACTTAACCGCATTA 60.612 41.667 0.00 0.00 0.00 1.90
319 320 4.678509 TTGCTTGACTTAACCGCATTAG 57.321 40.909 0.00 0.00 0.00 1.73
320 321 3.670625 TGCTTGACTTAACCGCATTAGT 58.329 40.909 0.00 0.00 0.00 2.24
321 322 3.435327 TGCTTGACTTAACCGCATTAGTG 59.565 43.478 0.00 0.00 0.00 2.74
328 329 2.272146 CCGCATTAGTGGTGGCCT 59.728 61.111 3.32 0.00 40.63 5.19
329 330 1.819632 CCGCATTAGTGGTGGCCTC 60.820 63.158 3.32 0.00 40.63 4.70
330 331 1.221840 CGCATTAGTGGTGGCCTCT 59.778 57.895 3.32 0.00 0.00 3.69
331 332 0.392998 CGCATTAGTGGTGGCCTCTT 60.393 55.000 3.32 0.00 0.00 2.85
332 333 1.134521 CGCATTAGTGGTGGCCTCTTA 60.135 52.381 3.32 0.00 0.00 2.10
333 334 2.485479 CGCATTAGTGGTGGCCTCTTAT 60.485 50.000 3.32 0.00 0.00 1.73
334 335 2.880890 GCATTAGTGGTGGCCTCTTATG 59.119 50.000 3.32 8.12 37.28 1.90
335 336 3.480470 CATTAGTGGTGGCCTCTTATGG 58.520 50.000 3.32 0.00 33.37 2.74
353 354 4.685169 ATGGCTGAAACTTGTTGTATCG 57.315 40.909 0.00 0.00 0.00 2.92
360 361 6.073440 GCTGAAACTTGTTGTATCGGTTTCTA 60.073 38.462 14.80 4.62 43.22 2.10
387 388 4.099881 ACTTGTTTGTTGGATGATGTTGCT 59.900 37.500 0.00 0.00 0.00 3.91
568 570 2.037902 TGTGAACGGCTGAAGGTGAATA 59.962 45.455 0.00 0.00 0.00 1.75
684 686 2.352127 GCAGCCATCTTTGACAAGAACC 60.352 50.000 0.00 0.00 42.53 3.62
738 742 4.022589 GCCGTGTCAGCTAGGTATTACATA 60.023 45.833 0.00 0.00 0.00 2.29
943 953 3.821841 CCAAAAACTGTACCGATTGAGC 58.178 45.455 0.00 0.00 0.00 4.26
1158 1183 4.626081 AACGGCCTGCTCGCACTT 62.626 61.111 0.00 0.00 0.00 3.16
1335 1390 4.699522 GGGCTCGCCTTCGTGGTT 62.700 66.667 8.00 0.00 38.35 3.67
1455 1510 0.980423 TCGACACCATCATGAACCCA 59.020 50.000 0.00 0.00 0.00 4.51
1890 1975 0.610174 TGATCTTGGCTCTCGTGCTT 59.390 50.000 0.00 0.00 0.00 3.91
1923 2008 0.666274 TATTGATCATCGCCGCGGTC 60.666 55.000 28.70 18.03 0.00 4.79
1974 2059 1.298859 GGCGTCGATTTGCTGAGGTT 61.299 55.000 0.00 0.00 0.00 3.50
2239 2324 6.827586 ATCTAGCACAGTTACTAGGCTATC 57.172 41.667 14.56 0.00 36.57 2.08
2301 2386 4.219115 TGGAAAATGGTAGCCTTGACAAA 58.781 39.130 0.00 0.00 0.00 2.83
3173 3261 4.401925 AGATCAGAAGTTTTCCCCACAAG 58.598 43.478 0.00 0.00 0.00 3.16
3239 3327 8.806429 ATTTGTCAAAAAGAAAAGGAAATGGT 57.194 26.923 1.31 0.00 0.00 3.55
3240 3328 9.898152 ATTTGTCAAAAAGAAAAGGAAATGGTA 57.102 25.926 1.31 0.00 0.00 3.25
3250 4242 9.811995 AAGAAAAGGAAATGGTAAGTACAAAAC 57.188 29.630 0.00 0.00 0.00 2.43
3435 4976 1.479709 CAAATACATGGGCCCCGAAA 58.520 50.000 22.27 0.00 0.00 3.46
3465 5006 7.012327 TCTCCGTTGACCATAAATCATCATTTC 59.988 37.037 0.00 0.00 33.95 2.17
3466 5007 6.601217 TCCGTTGACCATAAATCATCATTTCA 59.399 34.615 0.00 0.00 33.95 2.69
3467 5008 7.285172 TCCGTTGACCATAAATCATCATTTCAT 59.715 33.333 0.00 0.00 33.95 2.57
3620 6026 0.179084 CCCGTTGTCACACTCACACT 60.179 55.000 0.00 0.00 0.00 3.55
3628 6034 3.349006 CACTCACACTGTGGCGGC 61.349 66.667 13.09 0.00 33.87 6.53
3631 6037 1.005037 CTCACACTGTGGCGGCTAA 60.005 57.895 11.43 0.00 33.87 3.09
3632 6038 0.602638 CTCACACTGTGGCGGCTAAA 60.603 55.000 11.43 0.00 33.87 1.85
3633 6039 0.036164 TCACACTGTGGCGGCTAAAT 59.964 50.000 11.43 0.00 33.87 1.40
3634 6040 0.881118 CACACTGTGGCGGCTAAATT 59.119 50.000 11.43 0.00 0.00 1.82
3635 6041 1.269448 CACACTGTGGCGGCTAAATTT 59.731 47.619 11.43 0.00 0.00 1.82
3636 6042 1.539827 ACACTGTGGCGGCTAAATTTC 59.460 47.619 11.43 0.00 0.00 2.17
3637 6043 0.802494 ACTGTGGCGGCTAAATTTCG 59.198 50.000 11.43 0.00 0.00 3.46
3638 6044 0.802494 CTGTGGCGGCTAAATTTCGT 59.198 50.000 11.43 0.00 0.00 3.85
3639 6045 0.519519 TGTGGCGGCTAAATTTCGTG 59.480 50.000 11.43 0.00 0.00 4.35
3640 6046 0.519961 GTGGCGGCTAAATTTCGTGT 59.480 50.000 11.43 0.00 0.00 4.49
3641 6047 1.068816 GTGGCGGCTAAATTTCGTGTT 60.069 47.619 11.43 0.00 0.00 3.32
3642 6048 1.609555 TGGCGGCTAAATTTCGTGTTT 59.390 42.857 11.43 0.00 0.00 2.83
3643 6049 2.034812 TGGCGGCTAAATTTCGTGTTTT 59.965 40.909 11.43 0.00 0.00 2.43
3644 6050 2.407026 GGCGGCTAAATTTCGTGTTTTG 59.593 45.455 0.00 0.00 0.00 2.44
3645 6051 3.301706 GCGGCTAAATTTCGTGTTTTGA 58.698 40.909 0.00 0.00 0.00 2.69
3646 6052 3.917985 GCGGCTAAATTTCGTGTTTTGAT 59.082 39.130 0.00 0.00 0.00 2.57
3648 6054 4.557301 CGGCTAAATTTCGTGTTTTGATCC 59.443 41.667 0.00 0.00 0.00 3.36
3651 6057 6.645003 GGCTAAATTTCGTGTTTTGATCCTTT 59.355 34.615 0.00 0.00 0.00 3.11
3652 6058 7.170828 GGCTAAATTTCGTGTTTTGATCCTTTT 59.829 33.333 0.00 0.00 0.00 2.27
3681 6087 6.865834 ACCTATTTGAGATCTGACTCTTGT 57.134 37.500 0.00 0.00 37.73 3.16
3682 6088 7.251321 ACCTATTTGAGATCTGACTCTTGTT 57.749 36.000 0.00 0.00 37.73 2.83
3685 6091 7.821359 CCTATTTGAGATCTGACTCTTGTTTGA 59.179 37.037 0.00 0.00 37.73 2.69
3686 6092 9.212641 CTATTTGAGATCTGACTCTTGTTTGAA 57.787 33.333 0.00 0.00 37.73 2.69
3687 6093 7.864108 TTTGAGATCTGACTCTTGTTTGAAA 57.136 32.000 0.00 0.00 37.73 2.69
3688 6094 7.864108 TTGAGATCTGACTCTTGTTTGAAAA 57.136 32.000 0.00 0.00 37.73 2.29
3710 6116 6.901081 AAAAATTCGAGATCTGACCCTTTT 57.099 33.333 0.00 0.00 0.00 2.27
3712 6118 2.386661 TCGAGATCTGACCCTTTTGC 57.613 50.000 0.00 0.00 0.00 3.68
3713 6119 1.902508 TCGAGATCTGACCCTTTTGCT 59.097 47.619 0.00 0.00 0.00 3.91
3714 6120 3.096852 TCGAGATCTGACCCTTTTGCTA 58.903 45.455 0.00 0.00 0.00 3.49
3715 6121 3.119101 TCGAGATCTGACCCTTTTGCTAC 60.119 47.826 0.00 0.00 0.00 3.58
3718 6124 0.321298 TCTGACCCTTTTGCTACCGC 60.321 55.000 0.00 0.00 0.00 5.68
3723 6129 2.046285 CCTTTTGCTACCGCCAGGG 61.046 63.158 0.00 0.00 43.47 4.45
3725 6131 1.302993 TTTTGCTACCGCCAGGGAC 60.303 57.895 0.00 0.00 43.47 4.46
3728 6134 3.480133 GCTACCGCCAGGGACCAT 61.480 66.667 0.00 0.00 43.47 3.55
3729 6135 2.505982 CTACCGCCAGGGACCATG 59.494 66.667 0.00 0.00 43.47 3.66
3730 6136 3.087253 TACCGCCAGGGACCATGG 61.087 66.667 21.21 21.21 43.47 3.66
3746 6152 4.402056 CCATGGCGGTAGGGTATAATAG 57.598 50.000 0.00 0.00 0.00 1.73
3755 6161 2.598686 GGGTATAATAGCCTAGCGCC 57.401 55.000 2.29 0.00 42.93 6.53
3756 6162 1.829222 GGGTATAATAGCCTAGCGCCA 59.171 52.381 2.29 0.00 42.93 5.69
3759 6165 2.770164 ATAATAGCCTAGCGCCAAGG 57.230 50.000 19.58 19.58 38.78 3.61
3760 6166 1.712056 TAATAGCCTAGCGCCAAGGA 58.288 50.000 26.22 9.89 38.78 3.36
3761 6167 0.106894 AATAGCCTAGCGCCAAGGAC 59.893 55.000 26.22 17.75 38.78 3.85
3763 6169 4.858680 GCCTAGCGCCAAGGACCC 62.859 72.222 26.22 8.34 36.08 4.46
3764 6170 3.083997 CCTAGCGCCAAGGACCCT 61.084 66.667 19.24 0.00 36.08 4.34
3765 6171 2.187946 CTAGCGCCAAGGACCCTG 59.812 66.667 2.29 0.00 0.00 4.45
3766 6172 3.391665 CTAGCGCCAAGGACCCTGG 62.392 68.421 2.29 4.56 0.00 4.45
3779 6185 4.028490 CCTGGCGGTAGGGTTGCA 62.028 66.667 0.00 0.00 34.06 4.08
3780 6186 2.272146 CTGGCGGTAGGGTTGCAT 59.728 61.111 0.00 0.00 0.00 3.96
3781 6187 2.045438 TGGCGGTAGGGTTGCATG 60.045 61.111 0.00 0.00 0.00 4.06
3783 6189 3.518068 GCGGTAGGGTTGCATGCC 61.518 66.667 16.68 0.00 0.00 4.40
3784 6190 2.045438 CGGTAGGGTTGCATGCCA 60.045 61.111 16.68 0.00 0.00 4.92
3785 6191 1.453745 CGGTAGGGTTGCATGCCAT 60.454 57.895 16.68 0.00 0.00 4.40
3786 6192 0.179032 CGGTAGGGTTGCATGCCATA 60.179 55.000 16.68 0.00 0.00 2.74
3788 6194 1.318576 GTAGGGTTGCATGCCATACC 58.681 55.000 16.68 18.65 37.32 2.73
3789 6195 0.179032 TAGGGTTGCATGCCATACCG 60.179 55.000 16.68 0.00 0.00 4.02
3790 6196 1.752694 GGGTTGCATGCCATACCGT 60.753 57.895 16.68 0.00 0.00 4.83
3791 6197 1.724582 GGGTTGCATGCCATACCGTC 61.725 60.000 16.68 4.94 0.00 4.79
3792 6198 1.029408 GGTTGCATGCCATACCGTCA 61.029 55.000 16.68 0.00 0.00 4.35
3793 6199 0.808125 GTTGCATGCCATACCGTCAA 59.192 50.000 16.68 0.00 0.00 3.18
3794 6200 1.201181 GTTGCATGCCATACCGTCAAA 59.799 47.619 16.68 0.00 0.00 2.69
3796 6202 0.100503 GCATGCCATACCGTCAAACC 59.899 55.000 6.36 0.00 0.00 3.27
3799 6205 2.110352 GCCATACCGTCAAACCCCG 61.110 63.158 0.00 0.00 0.00 5.73
3800 6206 2.110352 CCATACCGTCAAACCCCGC 61.110 63.158 0.00 0.00 0.00 6.13
3801 6207 2.110352 CATACCGTCAAACCCCGCC 61.110 63.158 0.00 0.00 0.00 6.13
3802 6208 2.295602 ATACCGTCAAACCCCGCCT 61.296 57.895 0.00 0.00 0.00 5.52
3803 6209 0.977108 ATACCGTCAAACCCCGCCTA 60.977 55.000 0.00 0.00 0.00 3.93
3804 6210 1.190833 TACCGTCAAACCCCGCCTAA 61.191 55.000 0.00 0.00 0.00 2.69
3805 6211 1.743995 CCGTCAAACCCCGCCTAAG 60.744 63.158 0.00 0.00 0.00 2.18
3806 6212 1.004200 CGTCAAACCCCGCCTAAGT 60.004 57.895 0.00 0.00 0.00 2.24
3807 6213 0.247185 CGTCAAACCCCGCCTAAGTA 59.753 55.000 0.00 0.00 0.00 2.24
3808 6214 1.134610 CGTCAAACCCCGCCTAAGTAT 60.135 52.381 0.00 0.00 0.00 2.12
3809 6215 2.678769 CGTCAAACCCCGCCTAAGTATT 60.679 50.000 0.00 0.00 0.00 1.89
3810 6216 2.681344 GTCAAACCCCGCCTAAGTATTG 59.319 50.000 0.00 0.00 0.00 1.90
3811 6217 2.572556 TCAAACCCCGCCTAAGTATTGA 59.427 45.455 0.00 0.00 0.00 2.57
3812 6218 3.009253 TCAAACCCCGCCTAAGTATTGAA 59.991 43.478 0.00 0.00 0.00 2.69
3813 6219 2.704464 ACCCCGCCTAAGTATTGAAC 57.296 50.000 0.00 0.00 0.00 3.18
3814 6220 1.910671 ACCCCGCCTAAGTATTGAACA 59.089 47.619 0.00 0.00 0.00 3.18
3817 6223 2.936498 CCCGCCTAAGTATTGAACACAG 59.064 50.000 0.00 0.00 0.00 3.66
3818 6224 3.596214 CCGCCTAAGTATTGAACACAGT 58.404 45.455 0.00 0.00 0.00 3.55
3819 6225 3.370978 CCGCCTAAGTATTGAACACAGTG 59.629 47.826 0.00 0.00 0.00 3.66
3832 7190 2.280389 CAGTGTGTGCTCGTGCCT 60.280 61.111 7.05 0.00 38.71 4.75
3834 7192 1.006102 AGTGTGTGCTCGTGCCTAC 60.006 57.895 7.05 6.63 38.71 3.18
3836 7194 2.809601 GTGTGCTCGTGCCTACCG 60.810 66.667 7.05 0.00 38.71 4.02
3842 7200 4.752879 TCGTGCCTACCGCCAAGC 62.753 66.667 0.00 0.00 36.24 4.01
3845 7203 4.715523 TGCCTACCGCCAAGCACC 62.716 66.667 0.00 0.00 36.24 5.01
3846 7204 4.410400 GCCTACCGCCAAGCACCT 62.410 66.667 0.00 0.00 0.00 4.00
3847 7205 2.351276 CCTACCGCCAAGCACCTT 59.649 61.111 0.00 0.00 0.00 3.50
3855 7213 3.578456 CAAGCACCTTGGCGGTAG 58.422 61.111 0.00 0.00 46.94 3.18
3856 7214 2.040544 CAAGCACCTTGGCGGTAGG 61.041 63.158 0.00 0.00 46.94 3.18
3858 7216 4.029809 GCACCTTGGCGGTAGGGT 62.030 66.667 5.31 0.00 46.94 4.34
3859 7217 2.754375 CACCTTGGCGGTAGGGTT 59.246 61.111 5.31 0.00 46.94 4.11
3860 7218 1.674322 CACCTTGGCGGTAGGGTTG 60.674 63.158 5.31 0.00 46.94 3.77
3861 7219 2.151388 ACCTTGGCGGTAGGGTTGT 61.151 57.895 5.31 0.00 46.73 3.32
3862 7220 1.674322 CCTTGGCGGTAGGGTTGTG 60.674 63.158 0.00 0.00 0.00 3.33
3863 7221 2.281900 TTGGCGGTAGGGTTGTGC 60.282 61.111 0.00 0.00 0.00 4.57
3864 7222 3.121406 TTGGCGGTAGGGTTGTGCA 62.121 57.895 0.00 0.00 0.00 4.57
3865 7223 2.746277 GGCGGTAGGGTTGTGCAG 60.746 66.667 0.00 0.00 0.00 4.41
3866 7224 2.746277 GCGGTAGGGTTGTGCAGG 60.746 66.667 0.00 0.00 0.00 4.85
3867 7225 2.746277 CGGTAGGGTTGTGCAGGC 60.746 66.667 0.00 0.00 0.00 4.85
3869 7227 1.895020 CGGTAGGGTTGTGCAGGCTA 61.895 60.000 0.00 0.00 0.00 3.93
3871 7229 0.392595 GTAGGGTTGTGCAGGCTACC 60.393 60.000 0.00 0.00 0.00 3.18
3874 7232 1.032114 GGGTTGTGCAGGCTACCATC 61.032 60.000 9.51 0.00 32.20 3.51
3875 7233 0.322456 GGTTGTGCAGGCTACCATCA 60.322 55.000 3.58 0.00 0.00 3.07
3876 7234 1.089920 GTTGTGCAGGCTACCATCAG 58.910 55.000 0.00 0.00 0.00 2.90
3877 7235 0.677731 TTGTGCAGGCTACCATCAGC 60.678 55.000 0.00 0.00 41.02 4.26
3898 7256 4.073293 CCTATTTGGCGGTAGAGATGTT 57.927 45.455 0.00 0.00 0.00 2.71
3900 7258 4.511826 CCTATTTGGCGGTAGAGATGTTTC 59.488 45.833 0.00 0.00 0.00 2.78
3901 7259 2.396590 TTGGCGGTAGAGATGTTTCC 57.603 50.000 0.00 0.00 0.00 3.13
3903 7261 2.742348 TGGCGGTAGAGATGTTTCCTA 58.258 47.619 0.00 0.00 0.00 2.94
3904 7262 2.429610 TGGCGGTAGAGATGTTTCCTAC 59.570 50.000 0.00 0.00 33.79 3.18
3905 7263 2.223994 GGCGGTAGAGATGTTTCCTACC 60.224 54.545 0.00 0.00 45.47 3.18
3908 7266 2.223994 GGTAGAGATGTTTCCTACCGCC 60.224 54.545 0.00 0.00 41.83 6.13
3909 7267 1.568504 AGAGATGTTTCCTACCGCCA 58.431 50.000 0.00 0.00 0.00 5.69
3910 7268 1.906574 AGAGATGTTTCCTACCGCCAA 59.093 47.619 0.00 0.00 0.00 4.52
3912 7270 2.678336 GAGATGTTTCCTACCGCCAAAG 59.322 50.000 0.00 0.00 0.00 2.77
3913 7271 2.039879 AGATGTTTCCTACCGCCAAAGT 59.960 45.455 0.00 0.00 0.00 2.66
3915 7273 1.162698 GTTTCCTACCGCCAAAGTCC 58.837 55.000 0.00 0.00 0.00 3.85
3916 7274 0.037160 TTTCCTACCGCCAAAGTCCC 59.963 55.000 0.00 0.00 0.00 4.46
3919 7277 1.078426 CTACCGCCAAAGTCCCTGG 60.078 63.158 0.00 0.00 36.99 4.45
3924 7282 3.074281 CCAAAGTCCCTGGCGGTA 58.926 61.111 0.00 0.00 0.00 4.02
3925 7283 1.078426 CCAAAGTCCCTGGCGGTAG 60.078 63.158 0.00 0.00 0.00 3.18
3926 7284 1.078426 CAAAGTCCCTGGCGGTAGG 60.078 63.158 0.00 0.00 37.59 3.18
3927 7285 2.967946 AAAGTCCCTGGCGGTAGGC 61.968 63.158 0.00 0.00 44.11 3.93
3928 7286 3.925914 AAGTCCCTGGCGGTAGGCT 62.926 63.158 0.00 0.00 44.18 4.58
3929 7287 4.162690 GTCCCTGGCGGTAGGCTG 62.163 72.222 0.00 0.00 44.18 4.85
3930 7288 4.715130 TCCCTGGCGGTAGGCTGT 62.715 66.667 0.00 0.00 44.18 4.40
3932 7290 2.363975 CCCTGGCGGTAGGCTGTTA 61.364 63.158 0.00 0.00 44.18 2.41
3933 7291 1.144057 CCTGGCGGTAGGCTGTTAG 59.856 63.158 0.00 0.00 44.18 2.34
3934 7292 1.327690 CCTGGCGGTAGGCTGTTAGA 61.328 60.000 0.00 0.00 44.18 2.10
3935 7293 0.179108 CTGGCGGTAGGCTGTTAGAC 60.179 60.000 0.00 0.00 44.18 2.59
3936 7294 1.143401 GGCGGTAGGCTGTTAGACC 59.857 63.158 0.00 0.00 42.94 3.85
3938 7296 1.328430 GCGGTAGGCTGTTAGACCCT 61.328 60.000 0.00 0.00 39.11 4.34
3940 7298 1.680207 CGGTAGGCTGTTAGACCCTAC 59.320 57.143 0.00 7.39 46.60 3.18
3942 7300 1.680207 GTAGGCTGTTAGACCCTACCG 59.320 57.143 0.00 0.00 43.31 4.02
3943 7301 1.143401 GGCTGTTAGACCCTACCGC 59.857 63.158 0.00 0.00 0.00 5.68
3944 7302 1.143401 GCTGTTAGACCCTACCGCC 59.857 63.158 0.00 0.00 0.00 6.13
3945 7303 1.610554 GCTGTTAGACCCTACCGCCA 61.611 60.000 0.00 0.00 0.00 5.69
3946 7304 1.120530 CTGTTAGACCCTACCGCCAT 58.879 55.000 0.00 0.00 0.00 4.40
3947 7305 0.828022 TGTTAGACCCTACCGCCATG 59.172 55.000 0.00 0.00 0.00 3.66
3948 7306 0.106149 GTTAGACCCTACCGCCATGG 59.894 60.000 7.63 7.63 46.41 3.66
3950 7308 0.757935 TAGACCCTACCGCCATGGAC 60.758 60.000 18.40 5.97 42.00 4.02
3951 7309 2.040606 ACCCTACCGCCATGGACT 59.959 61.111 18.40 0.00 42.00 3.85
3952 7310 2.029307 GACCCTACCGCCATGGACTC 62.029 65.000 18.40 0.00 42.00 3.36
3953 7311 1.762460 CCCTACCGCCATGGACTCT 60.762 63.158 18.40 0.00 42.00 3.24
3961 7319 3.902515 CCATGGACTCTGGCGATAG 57.097 57.895 5.56 0.00 0.00 2.08
3978 7336 5.162000 CGATAGCAAAAGGGTCAAATCTC 57.838 43.478 0.00 0.00 0.00 2.75
3979 7337 4.260375 CGATAGCAAAAGGGTCAAATCTCG 60.260 45.833 0.00 0.00 0.00 4.04
3980 7338 3.140325 AGCAAAAGGGTCAAATCTCGA 57.860 42.857 0.00 0.00 0.00 4.04
3981 7339 3.486383 AGCAAAAGGGTCAAATCTCGAA 58.514 40.909 0.00 0.00 0.00 3.71
3982 7340 3.888930 AGCAAAAGGGTCAAATCTCGAAA 59.111 39.130 0.00 0.00 0.00 3.46
3983 7341 4.340950 AGCAAAAGGGTCAAATCTCGAAAA 59.659 37.500 0.00 0.00 0.00 2.29
3984 7342 5.047188 GCAAAAGGGTCAAATCTCGAAAAA 58.953 37.500 0.00 0.00 0.00 1.94
4007 7365 7.929941 AAAAATCAACTTAGGGTCAGATCTC 57.070 36.000 0.00 0.00 0.00 2.75
4008 7366 4.927978 ATCAACTTAGGGTCAGATCTCG 57.072 45.455 0.00 0.00 0.00 4.04
4009 7367 3.964411 TCAACTTAGGGTCAGATCTCGA 58.036 45.455 0.00 0.00 0.00 4.04
4010 7368 4.341487 TCAACTTAGGGTCAGATCTCGAA 58.659 43.478 0.00 0.00 0.00 3.71
4011 7369 4.956700 TCAACTTAGGGTCAGATCTCGAAT 59.043 41.667 0.00 0.00 0.00 3.34
4012 7370 6.127101 TCAACTTAGGGTCAGATCTCGAATA 58.873 40.000 0.00 0.00 0.00 1.75
4013 7371 6.263392 TCAACTTAGGGTCAGATCTCGAATAG 59.737 42.308 0.00 0.00 0.00 1.73
4014 7372 5.074115 ACTTAGGGTCAGATCTCGAATAGG 58.926 45.833 0.00 0.00 0.00 2.57
4015 7373 3.603965 AGGGTCAGATCTCGAATAGGT 57.396 47.619 0.00 0.00 0.00 3.08
4016 7374 3.917300 AGGGTCAGATCTCGAATAGGTT 58.083 45.455 0.00 0.00 0.00 3.50
4017 7375 4.290942 AGGGTCAGATCTCGAATAGGTTT 58.709 43.478 0.00 0.00 0.00 3.27
4018 7376 4.342665 AGGGTCAGATCTCGAATAGGTTTC 59.657 45.833 0.00 0.00 0.00 2.78
4019 7377 4.099573 GGGTCAGATCTCGAATAGGTTTCA 59.900 45.833 0.00 0.00 0.00 2.69
4020 7378 5.395324 GGGTCAGATCTCGAATAGGTTTCAA 60.395 44.000 0.00 0.00 0.00 2.69
4021 7379 6.106673 GGTCAGATCTCGAATAGGTTTCAAA 58.893 40.000 0.00 0.00 0.00 2.69
4022 7380 6.594159 GGTCAGATCTCGAATAGGTTTCAAAA 59.406 38.462 0.00 0.00 0.00 2.44
4023 7381 7.119262 GGTCAGATCTCGAATAGGTTTCAAAAA 59.881 37.037 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 9.490663 CGAATTGAGCTAAAAATTTACGAAGAT 57.509 29.630 0.00 0.00 0.00 2.40
11 12 8.714179 TCGAATTGAGCTAAAAATTTACGAAGA 58.286 29.630 0.00 0.00 0.00 2.87
12 13 8.874745 TCGAATTGAGCTAAAAATTTACGAAG 57.125 30.769 0.00 0.00 0.00 3.79
13 14 8.714179 TCTCGAATTGAGCTAAAAATTTACGAA 58.286 29.630 0.00 4.42 44.86 3.85
14 15 8.246908 TCTCGAATTGAGCTAAAAATTTACGA 57.753 30.769 0.00 0.06 44.86 3.43
15 16 8.874745 TTCTCGAATTGAGCTAAAAATTTACG 57.125 30.769 0.00 0.00 44.86 3.18
26 27 9.565213 CAGAAATAAAAATTCTCGAATTGAGCT 57.435 29.630 5.71 0.00 44.86 4.09
27 28 8.316753 GCAGAAATAAAAATTCTCGAATTGAGC 58.683 33.333 5.71 0.00 44.86 4.26
28 29 9.345517 TGCAGAAATAAAAATTCTCGAATTGAG 57.654 29.630 5.71 0.00 46.72 3.02
29 30 9.128107 GTGCAGAAATAAAAATTCTCGAATTGA 57.872 29.630 5.71 0.00 40.57 2.57
30 31 8.914654 TGTGCAGAAATAAAAATTCTCGAATTG 58.085 29.630 5.71 0.00 40.57 2.32
31 32 9.474920 TTGTGCAGAAATAAAAATTCTCGAATT 57.525 25.926 0.00 0.00 42.35 2.17
32 33 9.474920 TTTGTGCAGAAATAAAAATTCTCGAAT 57.525 25.926 4.66 0.00 34.99 3.34
33 34 8.864069 TTTGTGCAGAAATAAAAATTCTCGAA 57.136 26.923 4.66 0.00 34.99 3.71
34 35 8.864069 TTTTGTGCAGAAATAAAAATTCTCGA 57.136 26.923 10.13 0.00 34.99 4.04
35 36 9.356929 GTTTTTGTGCAGAAATAAAAATTCTCG 57.643 29.630 10.13 0.00 34.99 4.04
40 41 9.553418 GTGTTGTTTTTGTGCAGAAATAAAAAT 57.447 25.926 10.13 0.00 35.34 1.82
41 42 8.017946 GGTGTTGTTTTTGTGCAGAAATAAAAA 58.982 29.630 10.13 6.36 31.72 1.94
42 43 7.173218 TGGTGTTGTTTTTGTGCAGAAATAAAA 59.827 29.630 10.13 4.13 0.00 1.52
43 44 6.650807 TGGTGTTGTTTTTGTGCAGAAATAAA 59.349 30.769 10.13 0.00 0.00 1.40
44 45 6.166279 TGGTGTTGTTTTTGTGCAGAAATAA 58.834 32.000 10.13 5.07 0.00 1.40
45 46 5.724328 TGGTGTTGTTTTTGTGCAGAAATA 58.276 33.333 10.13 2.40 0.00 1.40
46 47 4.573900 TGGTGTTGTTTTTGTGCAGAAAT 58.426 34.783 10.13 0.00 0.00 2.17
47 48 3.995199 TGGTGTTGTTTTTGTGCAGAAA 58.005 36.364 4.66 4.66 0.00 2.52
48 49 3.667497 TGGTGTTGTTTTTGTGCAGAA 57.333 38.095 0.00 0.00 0.00 3.02
49 50 3.883830 ATGGTGTTGTTTTTGTGCAGA 57.116 38.095 0.00 0.00 0.00 4.26
50 51 3.490526 GCTATGGTGTTGTTTTTGTGCAG 59.509 43.478 0.00 0.00 0.00 4.41
51 52 3.118992 TGCTATGGTGTTGTTTTTGTGCA 60.119 39.130 0.00 0.00 0.00 4.57
52 53 3.452474 TGCTATGGTGTTGTTTTTGTGC 58.548 40.909 0.00 0.00 0.00 4.57
53 54 6.601741 AATTGCTATGGTGTTGTTTTTGTG 57.398 33.333 0.00 0.00 0.00 3.33
54 55 6.458070 GCAAATTGCTATGGTGTTGTTTTTGT 60.458 34.615 11.19 0.00 40.96 2.83
55 56 5.908499 GCAAATTGCTATGGTGTTGTTTTTG 59.092 36.000 11.19 0.00 40.96 2.44
56 57 6.058827 GCAAATTGCTATGGTGTTGTTTTT 57.941 33.333 11.19 0.00 40.96 1.94
57 58 5.671742 GCAAATTGCTATGGTGTTGTTTT 57.328 34.783 11.19 0.00 40.96 2.43
71 72 3.735240 TGACGATGTTTTCAGCAAATTGC 59.265 39.130 10.41 10.41 45.46 3.56
72 73 5.490472 CTGACGATGTTTTCAGCAAATTG 57.510 39.130 0.00 0.00 35.78 2.32
79 80 1.522668 TGGGCTGACGATGTTTTCAG 58.477 50.000 0.00 0.00 41.96 3.02
80 81 1.879380 CTTGGGCTGACGATGTTTTCA 59.121 47.619 0.00 0.00 0.00 2.69
81 82 1.880027 ACTTGGGCTGACGATGTTTTC 59.120 47.619 0.00 0.00 0.00 2.29
82 83 1.981256 ACTTGGGCTGACGATGTTTT 58.019 45.000 0.00 0.00 0.00 2.43
83 84 1.981256 AACTTGGGCTGACGATGTTT 58.019 45.000 0.00 0.00 0.00 2.83
84 85 2.038557 ACTAACTTGGGCTGACGATGTT 59.961 45.455 2.57 2.57 0.00 2.71
85 86 1.623811 ACTAACTTGGGCTGACGATGT 59.376 47.619 0.00 0.00 0.00 3.06
86 87 2.386661 ACTAACTTGGGCTGACGATG 57.613 50.000 0.00 0.00 0.00 3.84
87 88 2.354805 GGAACTAACTTGGGCTGACGAT 60.355 50.000 0.00 0.00 0.00 3.73
88 89 1.001633 GGAACTAACTTGGGCTGACGA 59.998 52.381 0.00 0.00 0.00 4.20
89 90 1.270625 TGGAACTAACTTGGGCTGACG 60.271 52.381 0.00 0.00 0.00 4.35
90 91 2.561478 TGGAACTAACTTGGGCTGAC 57.439 50.000 0.00 0.00 0.00 3.51
91 92 3.073798 TGAATGGAACTAACTTGGGCTGA 59.926 43.478 0.00 0.00 0.00 4.26
92 93 3.420893 TGAATGGAACTAACTTGGGCTG 58.579 45.455 0.00 0.00 0.00 4.85
93 94 3.806949 TGAATGGAACTAACTTGGGCT 57.193 42.857 0.00 0.00 0.00 5.19
94 95 4.864704 TTTGAATGGAACTAACTTGGGC 57.135 40.909 0.00 0.00 0.00 5.36
95 96 6.588719 TGATTTGAATGGAACTAACTTGGG 57.411 37.500 0.00 0.00 0.00 4.12
96 97 8.739039 TGTATGATTTGAATGGAACTAACTTGG 58.261 33.333 0.00 0.00 0.00 3.61
110 111 8.826710 CGGCTACTCTAATTTGTATGATTTGAA 58.173 33.333 0.00 0.00 0.00 2.69
111 112 7.042051 GCGGCTACTCTAATTTGTATGATTTGA 60.042 37.037 0.00 0.00 0.00 2.69
112 113 7.072030 GCGGCTACTCTAATTTGTATGATTTG 58.928 38.462 0.00 0.00 0.00 2.32
113 114 6.073765 CGCGGCTACTCTAATTTGTATGATTT 60.074 38.462 0.00 0.00 0.00 2.17
114 115 5.405571 CGCGGCTACTCTAATTTGTATGATT 59.594 40.000 0.00 0.00 0.00 2.57
115 116 4.923871 CGCGGCTACTCTAATTTGTATGAT 59.076 41.667 0.00 0.00 0.00 2.45
116 117 4.202080 ACGCGGCTACTCTAATTTGTATGA 60.202 41.667 12.47 0.00 0.00 2.15
117 118 4.049186 ACGCGGCTACTCTAATTTGTATG 58.951 43.478 12.47 0.00 0.00 2.39
118 119 4.049186 CACGCGGCTACTCTAATTTGTAT 58.951 43.478 12.47 0.00 0.00 2.29
119 120 3.119388 ACACGCGGCTACTCTAATTTGTA 60.119 43.478 12.47 0.00 0.00 2.41
120 121 2.268298 CACGCGGCTACTCTAATTTGT 58.732 47.619 12.47 0.00 0.00 2.83
121 122 2.268298 ACACGCGGCTACTCTAATTTG 58.732 47.619 12.47 0.00 0.00 2.32
122 123 2.667473 ACACGCGGCTACTCTAATTT 57.333 45.000 12.47 0.00 0.00 1.82
123 124 2.268298 CAACACGCGGCTACTCTAATT 58.732 47.619 12.47 0.00 0.00 1.40
124 125 1.470979 CCAACACGCGGCTACTCTAAT 60.471 52.381 12.47 0.00 0.00 1.73
125 126 0.108992 CCAACACGCGGCTACTCTAA 60.109 55.000 12.47 0.00 0.00 2.10
126 127 0.961857 TCCAACACGCGGCTACTCTA 60.962 55.000 12.47 0.00 0.00 2.43
127 128 2.261671 CCAACACGCGGCTACTCT 59.738 61.111 12.47 0.00 0.00 3.24
128 129 2.092882 GTCCAACACGCGGCTACTC 61.093 63.158 12.47 0.00 0.00 2.59
129 130 2.048503 GTCCAACACGCGGCTACT 60.049 61.111 12.47 0.00 0.00 2.57
130 131 2.356553 TGTCCAACACGCGGCTAC 60.357 61.111 12.47 0.00 0.00 3.58
131 132 2.048597 CTGTCCAACACGCGGCTA 60.049 61.111 12.47 0.00 0.00 3.93
132 133 4.988598 CCTGTCCAACACGCGGCT 62.989 66.667 12.47 0.00 0.00 5.52
134 135 2.590575 AACCTGTCCAACACGCGG 60.591 61.111 12.47 1.27 0.00 6.46
135 136 2.935955 GAACCTGTCCAACACGCG 59.064 61.111 3.53 3.53 0.00 6.01
136 137 1.557443 CTCGAACCTGTCCAACACGC 61.557 60.000 0.00 0.00 0.00 5.34
137 138 1.557443 GCTCGAACCTGTCCAACACG 61.557 60.000 0.00 0.00 0.00 4.49
138 139 0.531974 TGCTCGAACCTGTCCAACAC 60.532 55.000 0.00 0.00 0.00 3.32
139 140 0.396435 ATGCTCGAACCTGTCCAACA 59.604 50.000 0.00 0.00 0.00 3.33
140 141 2.380084 TATGCTCGAACCTGTCCAAC 57.620 50.000 0.00 0.00 0.00 3.77
141 142 2.499693 TGATATGCTCGAACCTGTCCAA 59.500 45.455 0.00 0.00 0.00 3.53
142 143 2.107366 TGATATGCTCGAACCTGTCCA 58.893 47.619 0.00 0.00 0.00 4.02
143 144 2.890808 TGATATGCTCGAACCTGTCC 57.109 50.000 0.00 0.00 0.00 4.02
144 145 5.714047 TCATATGATATGCTCGAACCTGTC 58.286 41.667 7.56 0.00 0.00 3.51
145 146 5.728637 TCATATGATATGCTCGAACCTGT 57.271 39.130 7.56 0.00 0.00 4.00
146 147 6.592994 ACAATCATATGATATGCTCGAACCTG 59.407 38.462 18.47 10.58 33.73 4.00
147 148 6.705302 ACAATCATATGATATGCTCGAACCT 58.295 36.000 18.47 0.00 33.73 3.50
148 149 6.974932 ACAATCATATGATATGCTCGAACC 57.025 37.500 18.47 0.00 33.73 3.62
149 150 9.669353 AAAAACAATCATATGATATGCTCGAAC 57.331 29.630 18.47 0.00 33.73 3.95
178 179 3.121025 GCTTAAGAATGCAACCGTTTTGC 60.121 43.478 6.67 11.14 45.11 3.68
179 180 3.428534 GGCTTAAGAATGCAACCGTTTTG 59.571 43.478 6.67 0.00 0.00 2.44
180 181 3.554129 GGGCTTAAGAATGCAACCGTTTT 60.554 43.478 6.67 0.00 0.00 2.43
181 182 2.029380 GGGCTTAAGAATGCAACCGTTT 60.029 45.455 6.67 0.00 0.00 3.60
182 183 1.544246 GGGCTTAAGAATGCAACCGTT 59.456 47.619 6.67 0.00 0.00 4.44
183 184 1.173913 GGGCTTAAGAATGCAACCGT 58.826 50.000 6.67 0.00 0.00 4.83
184 185 1.463674 AGGGCTTAAGAATGCAACCG 58.536 50.000 6.67 0.00 0.00 4.44
185 186 4.036852 GTGATAGGGCTTAAGAATGCAACC 59.963 45.833 6.67 0.00 0.00 3.77
186 187 4.640201 TGTGATAGGGCTTAAGAATGCAAC 59.360 41.667 6.67 0.00 0.00 4.17
187 188 4.640201 GTGTGATAGGGCTTAAGAATGCAA 59.360 41.667 6.67 0.00 0.00 4.08
188 189 4.199310 GTGTGATAGGGCTTAAGAATGCA 58.801 43.478 6.67 0.00 0.00 3.96
189 190 4.035675 GTGTGTGATAGGGCTTAAGAATGC 59.964 45.833 6.67 0.00 0.00 3.56
190 191 4.271049 CGTGTGTGATAGGGCTTAAGAATG 59.729 45.833 6.67 0.00 0.00 2.67
191 192 4.442706 CGTGTGTGATAGGGCTTAAGAAT 58.557 43.478 6.67 0.00 0.00 2.40
192 193 3.369052 CCGTGTGTGATAGGGCTTAAGAA 60.369 47.826 6.67 0.00 0.00 2.52
193 194 2.167693 CCGTGTGTGATAGGGCTTAAGA 59.832 50.000 6.67 0.00 0.00 2.10
194 195 2.093658 ACCGTGTGTGATAGGGCTTAAG 60.094 50.000 0.00 0.00 0.00 1.85
195 196 1.903860 ACCGTGTGTGATAGGGCTTAA 59.096 47.619 0.00 0.00 0.00 1.85
196 197 1.563924 ACCGTGTGTGATAGGGCTTA 58.436 50.000 0.00 0.00 0.00 3.09
197 198 0.690762 AACCGTGTGTGATAGGGCTT 59.309 50.000 0.00 0.00 0.00 4.35
198 199 1.563924 TAACCGTGTGTGATAGGGCT 58.436 50.000 0.00 0.00 0.00 5.19
199 200 2.159014 TGATAACCGTGTGTGATAGGGC 60.159 50.000 0.00 0.00 0.00 5.19
200 201 3.812156 TGATAACCGTGTGTGATAGGG 57.188 47.619 0.00 0.00 0.00 3.53
201 202 4.693283 ACATGATAACCGTGTGTGATAGG 58.307 43.478 0.00 0.00 43.04 2.57
202 203 6.305638 CGATACATGATAACCGTGTGTGATAG 59.694 42.308 0.00 0.00 44.29 2.08
203 204 6.146898 CGATACATGATAACCGTGTGTGATA 58.853 40.000 0.00 0.00 44.29 2.15
204 205 4.982295 CGATACATGATAACCGTGTGTGAT 59.018 41.667 0.00 0.00 44.29 3.06
205 206 4.142337 ACGATACATGATAACCGTGTGTGA 60.142 41.667 0.00 0.00 44.29 3.58
206 207 4.026886 CACGATACATGATAACCGTGTGTG 60.027 45.833 0.00 0.00 44.29 3.82
207 208 4.109766 CACGATACATGATAACCGTGTGT 58.890 43.478 0.00 0.00 44.29 3.72
208 209 4.692371 CACGATACATGATAACCGTGTG 57.308 45.455 0.00 0.00 44.29 3.82
211 212 4.337274 TCTCACACGATACATGATAACCGT 59.663 41.667 0.00 0.00 0.00 4.83
212 213 4.855531 TCTCACACGATACATGATAACCG 58.144 43.478 0.00 0.00 0.00 4.44
213 214 6.447162 TCATCTCACACGATACATGATAACC 58.553 40.000 0.00 0.00 0.00 2.85
214 215 7.096023 GGTTCATCTCACACGATACATGATAAC 60.096 40.741 0.00 0.00 0.00 1.89
215 216 6.923508 GGTTCATCTCACACGATACATGATAA 59.076 38.462 0.00 0.00 0.00 1.75
216 217 6.447162 GGTTCATCTCACACGATACATGATA 58.553 40.000 0.00 0.00 0.00 2.15
217 218 5.292765 GGTTCATCTCACACGATACATGAT 58.707 41.667 0.00 0.00 0.00 2.45
218 219 4.441495 GGGTTCATCTCACACGATACATGA 60.441 45.833 0.00 0.00 0.00 3.07
219 220 3.804325 GGGTTCATCTCACACGATACATG 59.196 47.826 0.00 0.00 0.00 3.21
220 221 3.181465 GGGGTTCATCTCACACGATACAT 60.181 47.826 0.00 0.00 0.00 2.29
221 222 2.167693 GGGGTTCATCTCACACGATACA 59.832 50.000 0.00 0.00 0.00 2.29
222 223 2.483188 GGGGGTTCATCTCACACGATAC 60.483 54.545 0.00 0.00 0.00 2.24
223 224 1.760613 GGGGGTTCATCTCACACGATA 59.239 52.381 0.00 0.00 0.00 2.92
224 225 0.541863 GGGGGTTCATCTCACACGAT 59.458 55.000 0.00 0.00 0.00 3.73
225 226 1.980052 GGGGGTTCATCTCACACGA 59.020 57.895 0.00 0.00 0.00 4.35
226 227 4.617875 GGGGGTTCATCTCACACG 57.382 61.111 0.00 0.00 0.00 4.49
240 241 1.481772 CAAAGGTGTGCAATATGGGGG 59.518 52.381 0.00 0.00 0.00 5.40
241 242 2.178580 ACAAAGGTGTGCAATATGGGG 58.821 47.619 0.00 0.00 36.31 4.96
242 243 4.142182 CCTTACAAAGGTGTGCAATATGGG 60.142 45.833 0.00 0.00 43.95 4.00
243 244 4.997565 CCTTACAAAGGTGTGCAATATGG 58.002 43.478 0.00 0.00 43.95 2.74
256 257 0.386731 CAAACCGCCGCCTTACAAAG 60.387 55.000 0.00 0.00 0.00 2.77
257 258 0.818445 TCAAACCGCCGCCTTACAAA 60.818 50.000 0.00 0.00 0.00 2.83
258 259 0.818445 TTCAAACCGCCGCCTTACAA 60.818 50.000 0.00 0.00 0.00 2.41
259 260 0.818445 TTTCAAACCGCCGCCTTACA 60.818 50.000 0.00 0.00 0.00 2.41
260 261 0.311477 TTTTCAAACCGCCGCCTTAC 59.689 50.000 0.00 0.00 0.00 2.34
261 262 1.068194 CATTTTCAAACCGCCGCCTTA 60.068 47.619 0.00 0.00 0.00 2.69
262 263 0.319469 CATTTTCAAACCGCCGCCTT 60.319 50.000 0.00 0.00 0.00 4.35
263 264 1.288752 CATTTTCAAACCGCCGCCT 59.711 52.632 0.00 0.00 0.00 5.52
264 265 2.379634 GCATTTTCAAACCGCCGCC 61.380 57.895 0.00 0.00 0.00 6.13
265 266 2.715849 CGCATTTTCAAACCGCCGC 61.716 57.895 0.00 0.00 0.00 6.53
266 267 1.334288 GACGCATTTTCAAACCGCCG 61.334 55.000 0.00 0.00 0.00 6.46
267 268 1.334288 CGACGCATTTTCAAACCGCC 61.334 55.000 0.00 0.00 0.00 6.13
268 269 1.334288 CCGACGCATTTTCAAACCGC 61.334 55.000 0.00 0.00 0.00 5.68
269 270 0.040781 ACCGACGCATTTTCAAACCG 60.041 50.000 0.00 0.00 0.00 4.44
270 271 2.128367 AACCGACGCATTTTCAAACC 57.872 45.000 0.00 0.00 0.00 3.27
271 272 5.417029 GTTTAAACCGACGCATTTTCAAAC 58.583 37.500 7.12 4.05 0.00 2.93
272 273 4.503370 GGTTTAAACCGACGCATTTTCAAA 59.497 37.500 21.22 0.00 39.66 2.69
273 274 4.043073 GGTTTAAACCGACGCATTTTCAA 58.957 39.130 21.22 0.00 39.66 2.69
274 275 3.630101 GGTTTAAACCGACGCATTTTCA 58.370 40.909 21.22 0.00 39.66 2.69
286 287 4.036567 AGTCAAGCAAACGGTTTAAACC 57.963 40.909 24.95 24.95 45.76 3.27
287 288 6.020440 GGTTAAGTCAAGCAAACGGTTTAAAC 60.020 38.462 9.98 9.98 34.65 2.01
288 289 6.035217 GGTTAAGTCAAGCAAACGGTTTAAA 58.965 36.000 5.69 0.00 34.65 1.52
289 290 5.580661 GGTTAAGTCAAGCAAACGGTTTAA 58.419 37.500 5.69 0.00 34.65 1.52
290 291 4.260702 CGGTTAAGTCAAGCAAACGGTTTA 60.261 41.667 5.69 0.00 34.13 2.01
291 292 3.487879 CGGTTAAGTCAAGCAAACGGTTT 60.488 43.478 0.00 0.00 34.13 3.27
292 293 2.032426 CGGTTAAGTCAAGCAAACGGTT 59.968 45.455 0.00 0.00 34.13 4.44
293 294 1.600485 CGGTTAAGTCAAGCAAACGGT 59.400 47.619 0.00 0.00 34.13 4.83
294 295 1.662026 GCGGTTAAGTCAAGCAAACGG 60.662 52.381 0.00 0.00 33.10 4.44
295 296 1.003331 TGCGGTTAAGTCAAGCAAACG 60.003 47.619 0.00 0.00 35.52 3.60
296 297 2.766970 TGCGGTTAAGTCAAGCAAAC 57.233 45.000 0.00 0.00 34.66 2.93
297 298 4.517453 ACTAATGCGGTTAAGTCAAGCAAA 59.483 37.500 0.00 0.00 41.37 3.68
298 299 4.069304 ACTAATGCGGTTAAGTCAAGCAA 58.931 39.130 0.00 0.00 41.37 3.91
299 300 3.435327 CACTAATGCGGTTAAGTCAAGCA 59.565 43.478 0.00 0.00 42.28 3.91
300 301 3.181510 CCACTAATGCGGTTAAGTCAAGC 60.182 47.826 0.00 0.00 0.00 4.01
301 302 4.000988 ACCACTAATGCGGTTAAGTCAAG 58.999 43.478 0.00 0.00 28.43 3.02
302 303 3.749088 CACCACTAATGCGGTTAAGTCAA 59.251 43.478 0.00 0.00 31.41 3.18
303 304 3.331150 CACCACTAATGCGGTTAAGTCA 58.669 45.455 0.00 0.00 31.41 3.41
304 305 2.676342 CCACCACTAATGCGGTTAAGTC 59.324 50.000 0.00 0.00 31.41 3.01
305 306 2.706890 CCACCACTAATGCGGTTAAGT 58.293 47.619 0.00 0.00 31.41 2.24
306 307 1.400494 GCCACCACTAATGCGGTTAAG 59.600 52.381 0.00 0.00 31.41 1.85
307 308 1.455248 GCCACCACTAATGCGGTTAA 58.545 50.000 0.00 0.00 31.41 2.01
308 309 0.393267 GGCCACCACTAATGCGGTTA 60.393 55.000 0.00 0.00 31.41 2.85
309 310 1.677633 GGCCACCACTAATGCGGTT 60.678 57.895 0.00 0.00 31.41 4.44
310 311 2.045340 GGCCACCACTAATGCGGT 60.045 61.111 0.00 0.00 35.27 5.68
311 312 1.819632 GAGGCCACCACTAATGCGG 60.820 63.158 5.01 0.00 0.00 5.69
312 313 0.392998 AAGAGGCCACCACTAATGCG 60.393 55.000 5.01 0.00 0.00 4.73
313 314 2.710096 TAAGAGGCCACCACTAATGC 57.290 50.000 5.01 0.00 0.00 3.56
314 315 3.480470 CCATAAGAGGCCACCACTAATG 58.520 50.000 5.01 0.00 0.00 1.90
315 316 3.864789 CCATAAGAGGCCACCACTAAT 57.135 47.619 5.01 0.00 0.00 1.73
326 327 4.520492 ACAACAAGTTTCAGCCATAAGAGG 59.480 41.667 0.00 0.00 0.00 3.69
327 328 5.695851 ACAACAAGTTTCAGCCATAAGAG 57.304 39.130 0.00 0.00 0.00 2.85
328 329 6.092122 CGATACAACAAGTTTCAGCCATAAGA 59.908 38.462 0.00 0.00 0.00 2.10
329 330 6.250819 CGATACAACAAGTTTCAGCCATAAG 58.749 40.000 0.00 0.00 0.00 1.73
330 331 5.123186 CCGATACAACAAGTTTCAGCCATAA 59.877 40.000 0.00 0.00 0.00 1.90
331 332 4.634004 CCGATACAACAAGTTTCAGCCATA 59.366 41.667 0.00 0.00 0.00 2.74
332 333 3.440173 CCGATACAACAAGTTTCAGCCAT 59.560 43.478 0.00 0.00 0.00 4.40
333 334 2.811431 CCGATACAACAAGTTTCAGCCA 59.189 45.455 0.00 0.00 0.00 4.75
334 335 2.812011 ACCGATACAACAAGTTTCAGCC 59.188 45.455 0.00 0.00 0.00 4.85
335 336 4.483476 AACCGATACAACAAGTTTCAGC 57.517 40.909 0.00 0.00 0.00 4.26
336 337 6.300354 AGAAACCGATACAACAAGTTTCAG 57.700 37.500 14.28 0.00 45.48 3.02
337 338 6.203338 GGTAGAAACCGATACAACAAGTTTCA 59.797 38.462 14.28 1.13 45.48 2.69
338 339 6.596703 GGTAGAAACCGATACAACAAGTTTC 58.403 40.000 5.94 5.94 44.14 2.78
339 340 6.549912 GGTAGAAACCGATACAACAAGTTT 57.450 37.500 0.00 0.00 35.62 2.66
360 361 5.385198 ACATCATCCAACAAACAAGTAGGT 58.615 37.500 0.00 0.00 0.00 3.08
537 539 1.531149 AGCCGTTCACATGAAGAAACG 59.469 47.619 0.00 9.38 34.27 3.60
568 570 3.795688 TGAAAAGGAGGATTGCTGACT 57.204 42.857 0.00 0.00 0.00 3.41
792 802 4.744631 GCCGTGAGTACTAGTCTACTACTC 59.255 50.000 13.58 13.58 39.80 2.59
903 913 3.728373 GGGGTGGAGATTGGCCGT 61.728 66.667 0.00 0.00 0.00 5.68
943 953 2.159234 CGCTTCCTTCAAGAGAAAGCAG 59.841 50.000 15.24 7.65 35.73 4.24
977 987 3.367395 GGTTTCTTGCCAGATTTAGTGCC 60.367 47.826 0.00 0.00 0.00 5.01
1155 1180 2.372172 CTGGAGGGTGAAGTTGGTAAGT 59.628 50.000 0.00 0.00 0.00 2.24
1158 1183 1.975680 GTCTGGAGGGTGAAGTTGGTA 59.024 52.381 0.00 0.00 0.00 3.25
1422 1477 4.121669 TCGAGCTCGACTGCCAGC 62.122 66.667 33.84 0.00 44.22 4.85
1455 1510 0.317160 TGTTGATGTCGCGGAACTCT 59.683 50.000 6.13 0.00 0.00 3.24
1890 1975 1.855295 TCAATACGGTGGCTAGTGGA 58.145 50.000 0.00 0.00 0.00 4.02
1923 2008 3.453070 GAAGGAGGCGGCAGCTAGG 62.453 68.421 13.08 0.00 44.37 3.02
1974 2059 0.104855 CATCCTCCCAATCTTCGCGA 59.895 55.000 3.71 3.71 0.00 5.87
2250 2335 2.240493 ACACCAAGAGAAGTTCACCG 57.760 50.000 5.50 0.00 0.00 4.94
2301 2386 8.458843 GTTGCTCCATTGTTATTGTACAAGTAT 58.541 33.333 14.65 0.00 40.99 2.12
2322 2407 1.260544 GAGGCCAATCCAAAGTTGCT 58.739 50.000 5.01 0.00 37.29 3.91
2323 2408 0.968405 TGAGGCCAATCCAAAGTTGC 59.032 50.000 5.01 0.00 37.29 4.17
3069 3155 9.046296 CAAATTAGTAGACCACCTATCAATGAC 57.954 37.037 0.00 0.00 0.00 3.06
3072 3158 7.128883 ACCCAAATTAGTAGACCACCTATCAAT 59.871 37.037 0.00 0.00 0.00 2.57
3074 3160 5.968167 ACCCAAATTAGTAGACCACCTATCA 59.032 40.000 0.00 0.00 0.00 2.15
3302 4294 8.514594 TCATCCTTTTTGTCTACATTTCATGAC 58.485 33.333 0.00 0.00 0.00 3.06
3501 5042 9.605275 CCTAATCTCACTTTGATCATTGTTCTA 57.395 33.333 0.00 0.00 0.00 2.10
3515 5056 9.740710 ACTTAAATTTGTAGCCTAATCTCACTT 57.259 29.630 0.00 0.00 0.00 3.16
3543 5084 4.399004 TTGGCTTAAAATGCACTTGTGT 57.601 36.364 0.00 0.00 0.00 3.72
3546 5087 7.887996 TTTAGATTGGCTTAAAATGCACTTG 57.112 32.000 0.00 0.00 0.00 3.16
3547 5088 9.506018 AATTTTAGATTGGCTTAAAATGCACTT 57.494 25.926 0.00 0.00 33.84 3.16
3575 5116 1.380785 CAGAGGGGCACAATGGCAT 60.381 57.895 4.66 0.00 45.76 4.40
3620 6026 0.519519 CACGAAATTTAGCCGCCACA 59.480 50.000 0.00 0.00 0.00 4.17
3655 6061 7.605691 ACAAGAGTCAGATCTCAAATAGGTTTG 59.394 37.037 0.00 0.00 44.81 2.93
3656 6062 7.684529 ACAAGAGTCAGATCTCAAATAGGTTT 58.315 34.615 0.00 0.00 36.97 3.27
3657 6063 7.251321 ACAAGAGTCAGATCTCAAATAGGTT 57.749 36.000 0.00 0.00 36.97 3.50
3658 6064 6.865834 ACAAGAGTCAGATCTCAAATAGGT 57.134 37.500 0.00 0.00 36.97 3.08
3659 6065 7.821359 TCAAACAAGAGTCAGATCTCAAATAGG 59.179 37.037 0.00 0.00 36.97 2.57
3660 6066 8.768957 TCAAACAAGAGTCAGATCTCAAATAG 57.231 34.615 0.00 0.00 36.97 1.73
3661 6067 9.559732 TTTCAAACAAGAGTCAGATCTCAAATA 57.440 29.630 0.00 0.00 36.97 1.40
3662 6068 8.455903 TTTCAAACAAGAGTCAGATCTCAAAT 57.544 30.769 0.00 0.00 36.97 2.32
3663 6069 7.864108 TTTCAAACAAGAGTCAGATCTCAAA 57.136 32.000 0.00 0.00 36.97 2.69
3664 6070 7.864108 TTTTCAAACAAGAGTCAGATCTCAA 57.136 32.000 0.00 0.00 36.97 3.02
3687 6093 6.681777 CAAAAGGGTCAGATCTCGAATTTTT 58.318 36.000 0.00 0.00 0.00 1.94
3688 6094 5.335976 GCAAAAGGGTCAGATCTCGAATTTT 60.336 40.000 0.00 1.44 0.00 1.82
3690 6096 3.691609 GCAAAAGGGTCAGATCTCGAATT 59.308 43.478 0.00 0.00 0.00 2.17
3692 6098 2.303022 AGCAAAAGGGTCAGATCTCGAA 59.697 45.455 0.00 0.00 0.00 3.71
3693 6099 1.902508 AGCAAAAGGGTCAGATCTCGA 59.097 47.619 0.00 0.00 0.00 4.04
3694 6100 2.393271 AGCAAAAGGGTCAGATCTCG 57.607 50.000 0.00 0.00 0.00 4.04
3695 6101 3.536570 GGTAGCAAAAGGGTCAGATCTC 58.463 50.000 0.00 0.00 0.00 2.75
3696 6102 2.093447 CGGTAGCAAAAGGGTCAGATCT 60.093 50.000 0.00 0.00 0.00 2.75
3697 6103 2.280628 CGGTAGCAAAAGGGTCAGATC 58.719 52.381 0.00 0.00 0.00 2.75
3699 6105 0.321298 GCGGTAGCAAAAGGGTCAGA 60.321 55.000 0.00 0.00 44.35 3.27
3700 6106 2.171635 GCGGTAGCAAAAGGGTCAG 58.828 57.895 0.00 0.00 44.35 3.51
3712 6118 2.505982 CATGGTCCCTGGCGGTAG 59.494 66.667 0.00 0.00 0.00 3.18
3713 6119 3.087253 CCATGGTCCCTGGCGGTA 61.087 66.667 2.57 0.00 0.00 4.02
3725 6131 3.431766 GCTATTATACCCTACCGCCATGG 60.432 52.174 7.63 7.63 46.41 3.66
3727 6133 2.770232 GGCTATTATACCCTACCGCCAT 59.230 50.000 0.00 0.00 36.37 4.40
3728 6134 2.181975 GGCTATTATACCCTACCGCCA 58.818 52.381 0.00 0.00 36.37 5.69
3729 6135 2.464782 AGGCTATTATACCCTACCGCC 58.535 52.381 0.00 0.00 36.58 6.13
3730 6136 3.067883 GCTAGGCTATTATACCCTACCGC 59.932 52.174 0.00 0.00 0.00 5.68
3732 6138 3.067883 GCGCTAGGCTATTATACCCTACC 59.932 52.174 0.00 0.00 39.11 3.18
3733 6139 3.067883 GGCGCTAGGCTATTATACCCTAC 59.932 52.174 7.64 0.00 42.94 3.18
3734 6140 3.294214 GGCGCTAGGCTATTATACCCTA 58.706 50.000 7.64 0.00 42.94 3.53
3735 6141 2.108970 GGCGCTAGGCTATTATACCCT 58.891 52.381 7.64 0.00 42.94 4.34
3736 6142 1.829222 TGGCGCTAGGCTATTATACCC 59.171 52.381 7.64 0.00 44.18 3.69
3738 6144 3.194968 TCCTTGGCGCTAGGCTATTATAC 59.805 47.826 20.01 0.00 44.18 1.47
3739 6145 3.194968 GTCCTTGGCGCTAGGCTATTATA 59.805 47.826 20.01 3.15 44.18 0.98
3741 6147 1.343465 GTCCTTGGCGCTAGGCTATTA 59.657 52.381 20.01 4.35 44.18 0.98
3742 6148 0.106894 GTCCTTGGCGCTAGGCTATT 59.893 55.000 20.01 0.00 44.18 1.73
3745 6151 3.787001 GGTCCTTGGCGCTAGGCT 61.787 66.667 20.01 0.00 44.18 4.58
3746 6152 4.858680 GGGTCCTTGGCGCTAGGC 62.859 72.222 20.01 15.49 44.11 3.93
3763 6169 2.114670 CATGCAACCCTACCGCCAG 61.115 63.158 0.00 0.00 0.00 4.85
3764 6170 2.045438 CATGCAACCCTACCGCCA 60.045 61.111 0.00 0.00 0.00 5.69
3765 6171 3.518068 GCATGCAACCCTACCGCC 61.518 66.667 14.21 0.00 0.00 6.13
3766 6172 3.518068 GGCATGCAACCCTACCGC 61.518 66.667 21.36 0.00 0.00 5.68
3767 6173 0.179032 TATGGCATGCAACCCTACCG 60.179 55.000 21.36 0.00 0.00 4.02
3770 6176 0.179032 CGGTATGGCATGCAACCCTA 60.179 55.000 21.36 0.00 0.00 3.53
3771 6177 1.453745 CGGTATGGCATGCAACCCT 60.454 57.895 21.36 0.00 0.00 4.34
3775 6181 1.201181 GTTTGACGGTATGGCATGCAA 59.799 47.619 21.36 9.21 0.00 4.08
3776 6182 0.808125 GTTTGACGGTATGGCATGCA 59.192 50.000 21.36 6.13 0.00 3.96
3777 6183 0.100503 GGTTTGACGGTATGGCATGC 59.899 55.000 9.90 9.90 0.00 4.06
3778 6184 0.738389 GGGTTTGACGGTATGGCATG 59.262 55.000 10.98 0.00 0.00 4.06
3779 6185 0.395173 GGGGTTTGACGGTATGGCAT 60.395 55.000 4.88 4.88 0.00 4.40
3780 6186 1.001887 GGGGTTTGACGGTATGGCA 60.002 57.895 0.00 0.00 0.00 4.92
3781 6187 2.110352 CGGGGTTTGACGGTATGGC 61.110 63.158 0.00 0.00 0.00 4.40
3783 6189 2.110352 GGCGGGGTTTGACGGTATG 61.110 63.158 0.00 0.00 0.00 2.39
3784 6190 0.977108 TAGGCGGGGTTTGACGGTAT 60.977 55.000 0.00 0.00 0.00 2.73
3785 6191 1.190833 TTAGGCGGGGTTTGACGGTA 61.191 55.000 0.00 0.00 0.00 4.02
3786 6192 2.459202 CTTAGGCGGGGTTTGACGGT 62.459 60.000 0.00 0.00 0.00 4.83
3788 6194 0.247185 TACTTAGGCGGGGTTTGACG 59.753 55.000 0.00 0.00 0.00 4.35
3789 6195 2.681344 CAATACTTAGGCGGGGTTTGAC 59.319 50.000 0.00 0.00 0.00 3.18
3790 6196 2.572556 TCAATACTTAGGCGGGGTTTGA 59.427 45.455 0.00 0.00 0.00 2.69
3791 6197 2.993937 TCAATACTTAGGCGGGGTTTG 58.006 47.619 0.00 0.00 0.00 2.93
3792 6198 3.244981 TGTTCAATACTTAGGCGGGGTTT 60.245 43.478 0.00 0.00 0.00 3.27
3793 6199 2.306512 TGTTCAATACTTAGGCGGGGTT 59.693 45.455 0.00 0.00 0.00 4.11
3794 6200 1.910671 TGTTCAATACTTAGGCGGGGT 59.089 47.619 0.00 0.00 0.00 4.95
3796 6202 2.936498 CTGTGTTCAATACTTAGGCGGG 59.064 50.000 0.00 0.00 0.00 6.13
3799 6205 4.755123 ACACACTGTGTTCAATACTTAGGC 59.245 41.667 11.40 0.00 45.08 3.93
3800 6206 6.228273 CACACACTGTGTTCAATACTTAGG 57.772 41.667 12.33 0.00 45.08 2.69
3814 6220 1.744320 TAGGCACGAGCACACACTGT 61.744 55.000 7.26 0.00 44.61 3.55
3817 6223 2.027625 GGTAGGCACGAGCACACAC 61.028 63.158 7.26 0.00 44.61 3.82
3818 6224 2.342279 GGTAGGCACGAGCACACA 59.658 61.111 7.26 0.00 44.61 3.72
3819 6225 2.809601 CGGTAGGCACGAGCACAC 60.810 66.667 7.26 3.37 44.61 3.82
3829 7187 3.920093 AAGGTGCTTGGCGGTAGGC 62.920 63.158 0.00 0.00 44.11 3.93
3845 7203 2.332654 GCACAACCCTACCGCCAAG 61.333 63.158 0.00 0.00 0.00 3.61
3846 7204 2.281900 GCACAACCCTACCGCCAA 60.282 61.111 0.00 0.00 0.00 4.52
3847 7205 3.545124 CTGCACAACCCTACCGCCA 62.545 63.158 0.00 0.00 0.00 5.69
3849 7207 2.746277 CCTGCACAACCCTACCGC 60.746 66.667 0.00 0.00 0.00 5.68
3851 7209 0.392595 GTAGCCTGCACAACCCTACC 60.393 60.000 0.00 0.00 0.00 3.18
3852 7210 0.392595 GGTAGCCTGCACAACCCTAC 60.393 60.000 0.00 0.00 0.00 3.18
3853 7211 0.838554 TGGTAGCCTGCACAACCCTA 60.839 55.000 6.05 0.00 0.00 3.53
3854 7212 1.500783 ATGGTAGCCTGCACAACCCT 61.501 55.000 6.05 0.00 0.00 4.34
3855 7213 1.000896 ATGGTAGCCTGCACAACCC 60.001 57.895 6.05 0.00 0.00 4.11
3856 7214 0.322456 TGATGGTAGCCTGCACAACC 60.322 55.000 0.00 0.00 0.00 3.77
3858 7216 0.677731 GCTGATGGTAGCCTGCACAA 60.678 55.000 0.00 0.00 37.73 3.33
3859 7217 1.078214 GCTGATGGTAGCCTGCACA 60.078 57.895 0.00 0.00 37.73 4.57
3860 7218 3.819188 GCTGATGGTAGCCTGCAC 58.181 61.111 0.00 0.00 37.73 4.57
3877 7235 3.753294 ACATCTCTACCGCCAAATAGG 57.247 47.619 0.00 0.00 41.84 2.57
3878 7236 4.511826 GGAAACATCTCTACCGCCAAATAG 59.488 45.833 0.00 0.00 0.00 1.73
3879 7237 4.163458 AGGAAACATCTCTACCGCCAAATA 59.837 41.667 0.00 0.00 0.00 1.40
3881 7239 2.304761 AGGAAACATCTCTACCGCCAAA 59.695 45.455 0.00 0.00 0.00 3.28
3882 7240 1.906574 AGGAAACATCTCTACCGCCAA 59.093 47.619 0.00 0.00 0.00 4.52
3883 7241 1.568504 AGGAAACATCTCTACCGCCA 58.431 50.000 0.00 0.00 0.00 5.69
3884 7242 2.223994 GGTAGGAAACATCTCTACCGCC 60.224 54.545 0.00 0.00 42.16 6.13
3887 7245 2.223994 GGCGGTAGGAAACATCTCTACC 60.224 54.545 8.30 8.30 45.71 3.18
3888 7246 2.429610 TGGCGGTAGGAAACATCTCTAC 59.570 50.000 0.00 0.00 34.31 2.59
3889 7247 2.742348 TGGCGGTAGGAAACATCTCTA 58.258 47.619 0.00 0.00 0.00 2.43
3891 7249 2.396590 TTGGCGGTAGGAAACATCTC 57.603 50.000 0.00 0.00 0.00 2.75
3892 7250 2.039879 ACTTTGGCGGTAGGAAACATCT 59.960 45.455 0.00 0.00 0.00 2.90
3893 7251 2.418976 GACTTTGGCGGTAGGAAACATC 59.581 50.000 0.00 0.00 0.00 3.06
3896 7254 1.162698 GGACTTTGGCGGTAGGAAAC 58.837 55.000 0.00 0.00 0.00 2.78
3898 7256 0.838987 AGGGACTTTGGCGGTAGGAA 60.839 55.000 0.00 0.00 27.25 3.36
3900 7258 1.078426 CAGGGACTTTGGCGGTAGG 60.078 63.158 0.00 0.00 34.60 3.18
3901 7259 1.078426 CCAGGGACTTTGGCGGTAG 60.078 63.158 0.00 0.00 34.60 3.18
3908 7266 1.078426 CCTACCGCCAGGGACTTTG 60.078 63.158 0.00 0.00 43.47 2.77
3909 7267 2.967946 GCCTACCGCCAGGGACTTT 61.968 63.158 3.06 0.00 43.47 2.66
3910 7268 3.400054 GCCTACCGCCAGGGACTT 61.400 66.667 3.06 0.00 43.47 3.01
3912 7270 4.162690 CAGCCTACCGCCAGGGAC 62.163 72.222 3.06 0.00 43.47 4.46
3913 7271 2.808761 TAACAGCCTACCGCCAGGGA 62.809 60.000 3.06 0.00 43.47 4.20
3915 7273 1.144057 CTAACAGCCTACCGCCAGG 59.856 63.158 0.00 0.00 45.13 4.45
3916 7274 0.179108 GTCTAACAGCCTACCGCCAG 60.179 60.000 0.00 0.00 38.78 4.85
3919 7277 1.143401 GGGTCTAACAGCCTACCGC 59.857 63.158 0.00 0.00 39.90 5.68
3925 7283 1.143401 GCGGTAGGGTCTAACAGCC 59.857 63.158 0.00 0.00 43.93 4.85
3926 7284 1.143401 GGCGGTAGGGTCTAACAGC 59.857 63.158 0.00 0.00 36.28 4.40
3927 7285 1.120530 ATGGCGGTAGGGTCTAACAG 58.879 55.000 0.00 0.00 0.00 3.16
3928 7286 0.828022 CATGGCGGTAGGGTCTAACA 59.172 55.000 0.00 0.00 0.00 2.41
3929 7287 0.106149 CCATGGCGGTAGGGTCTAAC 59.894 60.000 0.00 0.00 0.00 2.34
3930 7288 0.031917 TCCATGGCGGTAGGGTCTAA 60.032 55.000 6.96 0.00 35.57 2.10
3932 7290 2.064581 GTCCATGGCGGTAGGGTCT 61.065 63.158 6.96 0.00 35.57 3.85
3933 7291 2.029307 GAGTCCATGGCGGTAGGGTC 62.029 65.000 6.96 0.00 35.57 4.46
3934 7292 2.040606 AGTCCATGGCGGTAGGGT 59.959 61.111 6.96 0.00 35.57 4.34
3935 7293 1.762460 AGAGTCCATGGCGGTAGGG 60.762 63.158 6.96 0.00 35.57 3.53
3936 7294 1.443407 CAGAGTCCATGGCGGTAGG 59.557 63.158 6.96 0.00 35.57 3.18
3938 7296 3.628989 CCAGAGTCCATGGCGGTA 58.371 61.111 6.96 0.00 35.57 4.02
3943 7301 0.320247 GCTATCGCCAGAGTCCATGG 60.320 60.000 4.97 4.97 41.04 3.66
3944 7302 0.390492 TGCTATCGCCAGAGTCCATG 59.610 55.000 0.00 0.00 34.43 3.66
3945 7303 1.123077 TTGCTATCGCCAGAGTCCAT 58.877 50.000 0.00 0.00 34.43 3.41
3946 7304 0.901827 TTTGCTATCGCCAGAGTCCA 59.098 50.000 0.00 0.00 34.43 4.02
3947 7305 1.936547 CTTTTGCTATCGCCAGAGTCC 59.063 52.381 0.00 0.00 34.43 3.85
3948 7306 1.936547 CCTTTTGCTATCGCCAGAGTC 59.063 52.381 0.00 0.00 34.43 3.36
3950 7308 1.303309 CCCTTTTGCTATCGCCAGAG 58.697 55.000 0.00 0.00 34.43 3.35
3951 7309 0.618458 ACCCTTTTGCTATCGCCAGA 59.382 50.000 0.00 0.00 34.43 3.86
3952 7310 1.017387 GACCCTTTTGCTATCGCCAG 58.983 55.000 0.00 0.00 34.43 4.85
3953 7311 0.326595 TGACCCTTTTGCTATCGCCA 59.673 50.000 0.00 0.00 34.43 5.69
3956 7314 4.260375 CGAGATTTGACCCTTTTGCTATCG 60.260 45.833 0.00 0.00 0.00 2.92
3957 7315 4.876107 TCGAGATTTGACCCTTTTGCTATC 59.124 41.667 0.00 0.00 0.00 2.08
3958 7316 4.843728 TCGAGATTTGACCCTTTTGCTAT 58.156 39.130 0.00 0.00 0.00 2.97
3959 7317 4.280436 TCGAGATTTGACCCTTTTGCTA 57.720 40.909 0.00 0.00 0.00 3.49
3960 7318 3.140325 TCGAGATTTGACCCTTTTGCT 57.860 42.857 0.00 0.00 0.00 3.91
3961 7319 3.915437 TTCGAGATTTGACCCTTTTGC 57.085 42.857 0.00 0.00 0.00 3.68
3983 7341 6.595716 CGAGATCTGACCCTAAGTTGATTTTT 59.404 38.462 0.00 0.00 0.00 1.94
3984 7342 6.070767 TCGAGATCTGACCCTAAGTTGATTTT 60.071 38.462 0.00 0.00 0.00 1.82
3985 7343 5.422331 TCGAGATCTGACCCTAAGTTGATTT 59.578 40.000 0.00 0.00 0.00 2.17
3986 7344 4.956700 TCGAGATCTGACCCTAAGTTGATT 59.043 41.667 0.00 0.00 0.00 2.57
3987 7345 4.537751 TCGAGATCTGACCCTAAGTTGAT 58.462 43.478 0.00 0.00 0.00 2.57
3988 7346 3.964411 TCGAGATCTGACCCTAAGTTGA 58.036 45.455 0.00 0.00 0.00 3.18
3989 7347 4.720649 TTCGAGATCTGACCCTAAGTTG 57.279 45.455 0.00 0.00 0.00 3.16
3990 7348 5.536916 CCTATTCGAGATCTGACCCTAAGTT 59.463 44.000 0.00 0.00 0.00 2.66
3991 7349 5.074115 CCTATTCGAGATCTGACCCTAAGT 58.926 45.833 0.00 0.00 0.00 2.24
3992 7350 5.074115 ACCTATTCGAGATCTGACCCTAAG 58.926 45.833 0.00 0.00 0.00 2.18
3993 7351 5.063017 ACCTATTCGAGATCTGACCCTAA 57.937 43.478 0.00 0.00 0.00 2.69
3994 7352 4.726035 ACCTATTCGAGATCTGACCCTA 57.274 45.455 0.00 0.00 0.00 3.53
3995 7353 3.603965 ACCTATTCGAGATCTGACCCT 57.396 47.619 0.00 0.00 0.00 4.34
3996 7354 4.099573 TGAAACCTATTCGAGATCTGACCC 59.900 45.833 0.00 0.00 0.00 4.46
3997 7355 5.263968 TGAAACCTATTCGAGATCTGACC 57.736 43.478 0.00 0.00 0.00 4.02
3998 7356 7.596749 TTTTGAAACCTATTCGAGATCTGAC 57.403 36.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.