Multiple sequence alignment - TraesCS2A01G185600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G185600 chr2A 100.000 2915 0 0 1 2915 146826394 146823480 0.000000e+00 5384.0
1 TraesCS2A01G185600 chr2A 82.123 179 24 8 2742 2914 775974007 775974183 2.340000e-31 147.0
2 TraesCS2A01G185600 chr2D 93.172 2065 95 25 640 2676 154170495 154172541 0.000000e+00 2990.0
3 TraesCS2A01G185600 chr2B 91.209 2150 89 36 828 2915 211613766 211615877 0.000000e+00 2832.0
4 TraesCS2A01G185600 chr2B 96.296 54 2 0 1 54 211613714 211613767 4.000000e-14 89.8
5 TraesCS2A01G185600 chr7D 81.773 203 31 5 2718 2915 92722318 92722519 6.460000e-37 165.0
6 TraesCS2A01G185600 chr7D 79.487 234 41 7 2687 2915 353804085 353803854 3.010000e-35 159.0
7 TraesCS2A01G185600 chr5D 79.828 233 41 5 2688 2914 526753405 526753173 6.460000e-37 165.0
8 TraesCS2A01G185600 chr5D 82.840 169 24 4 2750 2915 563996647 563996813 2.340000e-31 147.0
9 TraesCS2A01G185600 chr4D 82.222 180 25 6 2741 2915 12968293 12968470 6.510000e-32 148.0
10 TraesCS2A01G185600 chr5B 85.915 142 14 6 2775 2915 706417985 706418121 2.340000e-31 147.0
11 TraesCS2A01G185600 chr5B 80.588 170 33 0 1154 1323 495473508 495473339 6.550000e-27 132.0
12 TraesCS2A01G185600 chr3B 81.034 174 32 1 2742 2915 705569117 705568945 1.410000e-28 137.0
13 TraesCS2A01G185600 chr5A 80.447 179 34 1 1154 1331 523879587 523879409 5.070000e-28 135.0
14 TraesCS2A01G185600 chr7A 80.814 172 26 4 2750 2915 553224620 553224450 8.480000e-26 128.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G185600 chr2A 146823480 146826394 2914 True 5384.0 5384 100.0000 1 2915 1 chr2A.!!$R1 2914
1 TraesCS2A01G185600 chr2D 154170495 154172541 2046 False 2990.0 2990 93.1720 640 2676 1 chr2D.!!$F1 2036
2 TraesCS2A01G185600 chr2B 211613714 211615877 2163 False 1460.9 2832 93.7525 1 2915 2 chr2B.!!$F1 2914

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.036164 GGTGTGGTGATGCACTACCA 59.964 55.0 17.46 17.46 43.57 3.25 F
429 430 0.098728 CAACATTCGGTTCCGCATCC 59.901 55.0 6.35 0.00 37.72 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1653 1686 0.168348 ACGACGACTCGAACATCCAG 59.832 55.0 5.20 0.00 43.06 3.86 R
2257 2321 0.388659 GGTTTCCTGCATGCAACACA 59.611 50.0 22.88 3.41 0.00 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 9.975218 AAAATACAGAAGGTCAATTATAGTGGT 57.025 29.630 0.00 0.00 0.00 4.16
52 53 6.017605 CAGAAGGTCAATTATAGTGGTGATGC 60.018 42.308 0.00 0.00 0.00 3.91
53 54 5.372343 AGGTCAATTATAGTGGTGATGCA 57.628 39.130 0.00 0.00 0.00 3.96
54 55 5.126067 AGGTCAATTATAGTGGTGATGCAC 58.874 41.667 0.00 0.00 0.00 4.57
55 56 5.104360 AGGTCAATTATAGTGGTGATGCACT 60.104 40.000 0.00 0.00 34.40 4.40
56 57 6.099701 AGGTCAATTATAGTGGTGATGCACTA 59.900 38.462 0.00 0.00 38.15 2.74
57 58 6.765989 GGTCAATTATAGTGGTGATGCACTAA 59.234 38.462 0.00 0.00 37.44 2.24
58 59 7.445402 GGTCAATTATAGTGGTGATGCACTAAT 59.555 37.037 0.00 0.00 37.44 1.73
59 60 8.840321 GTCAATTATAGTGGTGATGCACTAATT 58.160 33.333 0.00 0.00 37.44 1.40
60 61 9.407380 TCAATTATAGTGGTGATGCACTAATTT 57.593 29.630 0.00 0.00 37.44 1.82
63 64 8.574251 TTATAGTGGTGATGCACTAATTTTGT 57.426 30.769 0.00 0.00 37.44 2.83
64 65 5.376854 AGTGGTGATGCACTAATTTTGTC 57.623 39.130 0.00 0.00 34.40 3.18
65 66 5.072741 AGTGGTGATGCACTAATTTTGTCT 58.927 37.500 0.00 0.00 34.40 3.41
66 67 5.536161 AGTGGTGATGCACTAATTTTGTCTT 59.464 36.000 0.00 0.00 34.40 3.01
67 68 5.630680 GTGGTGATGCACTAATTTTGTCTTG 59.369 40.000 0.00 0.00 34.40 3.02
68 69 5.534278 TGGTGATGCACTAATTTTGTCTTGA 59.466 36.000 0.00 0.00 34.40 3.02
69 70 6.040278 TGGTGATGCACTAATTTTGTCTTGAA 59.960 34.615 0.00 0.00 34.40 2.69
70 71 6.922957 GGTGATGCACTAATTTTGTCTTGAAA 59.077 34.615 0.00 0.00 34.40 2.69
71 72 7.115378 GGTGATGCACTAATTTTGTCTTGAAAG 59.885 37.037 0.00 0.00 34.40 2.62
72 73 7.115378 GTGATGCACTAATTTTGTCTTGAAAGG 59.885 37.037 0.00 0.00 0.00 3.11
73 74 6.463995 TGCACTAATTTTGTCTTGAAAGGT 57.536 33.333 0.00 0.00 0.00 3.50
74 75 6.272318 TGCACTAATTTTGTCTTGAAAGGTG 58.728 36.000 0.00 0.00 0.00 4.00
75 76 6.127479 TGCACTAATTTTGTCTTGAAAGGTGT 60.127 34.615 0.00 0.00 0.00 4.16
76 77 6.198966 GCACTAATTTTGTCTTGAAAGGTGTG 59.801 38.462 0.00 0.00 0.00 3.82
77 78 6.697019 CACTAATTTTGTCTTGAAAGGTGTGG 59.303 38.462 0.00 0.00 0.00 4.17
78 79 5.675684 AATTTTGTCTTGAAAGGTGTGGT 57.324 34.783 0.00 0.00 0.00 4.16
79 80 4.448537 TTTTGTCTTGAAAGGTGTGGTG 57.551 40.909 0.00 0.00 0.00 4.17
80 81 3.358111 TTGTCTTGAAAGGTGTGGTGA 57.642 42.857 0.00 0.00 0.00 4.02
81 82 3.576078 TGTCTTGAAAGGTGTGGTGAT 57.424 42.857 0.00 0.00 0.00 3.06
82 83 3.213506 TGTCTTGAAAGGTGTGGTGATG 58.786 45.455 0.00 0.00 0.00 3.07
83 84 2.030805 GTCTTGAAAGGTGTGGTGATGC 60.031 50.000 0.00 0.00 0.00 3.91
84 85 1.955778 CTTGAAAGGTGTGGTGATGCA 59.044 47.619 0.00 0.00 0.00 3.96
85 86 1.317613 TGAAAGGTGTGGTGATGCAC 58.682 50.000 0.00 0.00 35.07 4.57
86 87 1.133823 TGAAAGGTGTGGTGATGCACT 60.134 47.619 0.00 0.00 36.03 4.40
87 88 2.105649 TGAAAGGTGTGGTGATGCACTA 59.894 45.455 0.00 0.00 36.03 2.74
88 89 2.185004 AAGGTGTGGTGATGCACTAC 57.815 50.000 7.06 7.06 44.27 2.73
89 90 0.324943 AGGTGTGGTGATGCACTACC 59.675 55.000 13.02 13.02 43.57 3.18
90 91 0.036164 GGTGTGGTGATGCACTACCA 59.964 55.000 17.46 17.46 43.57 3.25
95 96 2.854522 GTGATGCACTACCACCACC 58.145 57.895 0.00 0.00 0.00 4.61
96 97 0.036164 GTGATGCACTACCACCACCA 59.964 55.000 0.00 0.00 0.00 4.17
97 98 0.767998 TGATGCACTACCACCACCAA 59.232 50.000 0.00 0.00 0.00 3.67
98 99 1.354031 TGATGCACTACCACCACCAAT 59.646 47.619 0.00 0.00 0.00 3.16
99 100 2.017049 GATGCACTACCACCACCAATC 58.983 52.381 0.00 0.00 0.00 2.67
100 101 1.064003 TGCACTACCACCACCAATCT 58.936 50.000 0.00 0.00 0.00 2.40
101 102 1.003118 TGCACTACCACCACCAATCTC 59.997 52.381 0.00 0.00 0.00 2.75
102 103 1.279271 GCACTACCACCACCAATCTCT 59.721 52.381 0.00 0.00 0.00 3.10
103 104 2.678190 GCACTACCACCACCAATCTCTC 60.678 54.545 0.00 0.00 0.00 3.20
104 105 2.567169 CACTACCACCACCAATCTCTCA 59.433 50.000 0.00 0.00 0.00 3.27
105 106 3.007940 CACTACCACCACCAATCTCTCAA 59.992 47.826 0.00 0.00 0.00 3.02
106 107 2.568623 ACCACCACCAATCTCTCAAC 57.431 50.000 0.00 0.00 0.00 3.18
107 108 1.073923 ACCACCACCAATCTCTCAACC 59.926 52.381 0.00 0.00 0.00 3.77
108 109 1.352352 CCACCACCAATCTCTCAACCT 59.648 52.381 0.00 0.00 0.00 3.50
109 110 2.571653 CCACCACCAATCTCTCAACCTA 59.428 50.000 0.00 0.00 0.00 3.08
110 111 3.369892 CCACCACCAATCTCTCAACCTAG 60.370 52.174 0.00 0.00 0.00 3.02
111 112 3.261897 CACCACCAATCTCTCAACCTAGT 59.738 47.826 0.00 0.00 0.00 2.57
112 113 3.261897 ACCACCAATCTCTCAACCTAGTG 59.738 47.826 0.00 0.00 0.00 2.74
113 114 3.515502 CCACCAATCTCTCAACCTAGTGA 59.484 47.826 0.00 0.00 0.00 3.41
114 115 4.163078 CCACCAATCTCTCAACCTAGTGAT 59.837 45.833 0.00 0.00 32.50 3.06
115 116 5.338708 CCACCAATCTCTCAACCTAGTGATT 60.339 44.000 0.00 0.00 39.21 2.57
116 117 5.814705 CACCAATCTCTCAACCTAGTGATTC 59.185 44.000 0.00 0.00 37.51 2.52
117 118 5.104735 ACCAATCTCTCAACCTAGTGATTCC 60.105 44.000 0.00 0.00 37.51 3.01
118 119 5.104776 CCAATCTCTCAACCTAGTGATTCCA 60.105 44.000 0.00 0.00 37.51 3.53
119 120 5.606348 ATCTCTCAACCTAGTGATTCCAC 57.394 43.478 0.00 0.00 43.50 4.02
120 121 3.769844 TCTCTCAACCTAGTGATTCCACC 59.230 47.826 0.00 0.00 44.22 4.61
121 122 3.515502 CTCTCAACCTAGTGATTCCACCA 59.484 47.826 0.00 0.00 44.22 4.17
122 123 3.260884 TCTCAACCTAGTGATTCCACCAC 59.739 47.826 0.00 0.00 44.22 4.16
123 124 2.976185 TCAACCTAGTGATTCCACCACA 59.024 45.455 0.00 0.00 44.22 4.17
124 125 3.392947 TCAACCTAGTGATTCCACCACAA 59.607 43.478 0.00 0.00 44.22 3.33
125 126 3.703001 ACCTAGTGATTCCACCACAAG 57.297 47.619 0.00 0.00 44.22 3.16
126 127 3.248024 ACCTAGTGATTCCACCACAAGA 58.752 45.455 0.00 0.00 44.22 3.02
127 128 3.261897 ACCTAGTGATTCCACCACAAGAG 59.738 47.826 0.00 0.00 44.22 2.85
128 129 2.867109 AGTGATTCCACCACAAGAGG 57.133 50.000 0.00 0.00 44.22 3.69
129 130 2.057922 AGTGATTCCACCACAAGAGGT 58.942 47.619 0.00 0.00 44.22 3.85
130 131 3.248024 AGTGATTCCACCACAAGAGGTA 58.752 45.455 0.00 0.00 44.22 3.08
131 132 3.650942 AGTGATTCCACCACAAGAGGTAA 59.349 43.478 0.00 0.00 44.22 2.85
132 133 4.289672 AGTGATTCCACCACAAGAGGTAAT 59.710 41.667 0.00 0.00 44.22 1.89
133 134 4.396166 GTGATTCCACCACAAGAGGTAATG 59.604 45.833 0.00 0.00 40.77 1.90
134 135 4.288366 TGATTCCACCACAAGAGGTAATGA 59.712 41.667 0.00 0.00 40.77 2.57
135 136 3.695830 TCCACCACAAGAGGTAATGAC 57.304 47.619 0.00 0.00 40.77 3.06
136 137 3.248024 TCCACCACAAGAGGTAATGACT 58.752 45.455 0.00 0.00 40.77 3.41
137 138 4.422057 TCCACCACAAGAGGTAATGACTA 58.578 43.478 0.00 0.00 40.77 2.59
138 139 5.030147 TCCACCACAAGAGGTAATGACTAT 58.970 41.667 0.00 0.00 40.77 2.12
139 140 5.104941 TCCACCACAAGAGGTAATGACTATG 60.105 44.000 0.00 0.00 40.77 2.23
140 141 5.104941 CCACCACAAGAGGTAATGACTATGA 60.105 44.000 0.00 0.00 40.77 2.15
141 142 6.408548 CCACCACAAGAGGTAATGACTATGAT 60.409 42.308 0.00 0.00 40.77 2.45
142 143 6.481313 CACCACAAGAGGTAATGACTATGATG 59.519 42.308 0.00 0.00 40.77 3.07
143 144 5.994054 CCACAAGAGGTAATGACTATGATGG 59.006 44.000 0.00 0.00 0.00 3.51
144 145 6.183361 CCACAAGAGGTAATGACTATGATGGA 60.183 42.308 0.00 0.00 0.00 3.41
145 146 6.703607 CACAAGAGGTAATGACTATGATGGAC 59.296 42.308 0.00 0.00 0.00 4.02
146 147 6.183361 ACAAGAGGTAATGACTATGATGGACC 60.183 42.308 0.00 0.00 0.00 4.46
147 148 5.721225 AGAGGTAATGACTATGATGGACCT 58.279 41.667 0.00 0.00 38.76 3.85
148 149 5.541868 AGAGGTAATGACTATGATGGACCTG 59.458 44.000 0.00 0.00 36.20 4.00
149 150 4.594920 AGGTAATGACTATGATGGACCTGG 59.405 45.833 0.00 0.00 34.78 4.45
150 151 3.498774 AATGACTATGATGGACCTGGC 57.501 47.619 0.00 0.00 0.00 4.85
151 152 2.180946 TGACTATGATGGACCTGGCT 57.819 50.000 0.00 0.00 0.00 4.75
152 153 3.328535 TGACTATGATGGACCTGGCTA 57.671 47.619 0.00 0.00 0.00 3.93
153 154 3.234353 TGACTATGATGGACCTGGCTAG 58.766 50.000 0.00 0.00 0.00 3.42
154 155 1.974236 ACTATGATGGACCTGGCTAGC 59.026 52.381 6.04 6.04 0.00 3.42
155 156 2.255406 CTATGATGGACCTGGCTAGCT 58.745 52.381 15.72 0.00 0.00 3.32
156 157 0.763652 ATGATGGACCTGGCTAGCTG 59.236 55.000 15.72 7.95 0.00 4.24
157 158 0.618680 TGATGGACCTGGCTAGCTGT 60.619 55.000 15.72 9.66 0.00 4.40
158 159 1.342975 TGATGGACCTGGCTAGCTGTA 60.343 52.381 15.72 0.60 0.00 2.74
159 160 1.762957 GATGGACCTGGCTAGCTGTAA 59.237 52.381 15.72 2.84 0.00 2.41
160 161 1.651737 TGGACCTGGCTAGCTGTAAA 58.348 50.000 15.72 0.00 0.00 2.01
161 162 2.196595 TGGACCTGGCTAGCTGTAAAT 58.803 47.619 15.72 0.00 0.00 1.40
162 163 2.576191 TGGACCTGGCTAGCTGTAAATT 59.424 45.455 15.72 0.00 0.00 1.82
163 164 2.945668 GGACCTGGCTAGCTGTAAATTG 59.054 50.000 15.72 0.00 0.00 2.32
164 165 3.370527 GGACCTGGCTAGCTGTAAATTGA 60.371 47.826 15.72 0.00 0.00 2.57
165 166 3.610911 ACCTGGCTAGCTGTAAATTGAC 58.389 45.455 15.72 0.00 0.00 3.18
166 167 3.264450 ACCTGGCTAGCTGTAAATTGACT 59.736 43.478 15.72 0.00 0.00 3.41
167 168 3.873952 CCTGGCTAGCTGTAAATTGACTC 59.126 47.826 15.72 0.00 0.00 3.36
168 169 4.507710 CTGGCTAGCTGTAAATTGACTCA 58.492 43.478 15.72 0.00 0.00 3.41
169 170 4.905429 TGGCTAGCTGTAAATTGACTCAA 58.095 39.130 15.72 0.00 0.00 3.02
170 171 5.312895 TGGCTAGCTGTAAATTGACTCAAA 58.687 37.500 15.72 0.00 0.00 2.69
171 172 5.412594 TGGCTAGCTGTAAATTGACTCAAAG 59.587 40.000 15.72 0.00 0.00 2.77
172 173 5.643777 GGCTAGCTGTAAATTGACTCAAAGA 59.356 40.000 15.72 0.00 0.00 2.52
173 174 6.149474 GGCTAGCTGTAAATTGACTCAAAGAA 59.851 38.462 15.72 0.00 0.00 2.52
174 175 7.018235 GCTAGCTGTAAATTGACTCAAAGAAC 58.982 38.462 7.70 0.00 0.00 3.01
175 176 6.942532 AGCTGTAAATTGACTCAAAGAACA 57.057 33.333 0.00 0.39 0.00 3.18
176 177 7.516198 AGCTGTAAATTGACTCAAAGAACAT 57.484 32.000 0.00 0.00 0.00 2.71
177 178 7.945134 AGCTGTAAATTGACTCAAAGAACATT 58.055 30.769 0.00 0.00 0.00 2.71
178 179 8.416329 AGCTGTAAATTGACTCAAAGAACATTT 58.584 29.630 0.00 0.00 0.00 2.32
179 180 8.482429 GCTGTAAATTGACTCAAAGAACATTTG 58.518 33.333 0.00 0.00 0.00 2.32
180 181 8.870160 TGTAAATTGACTCAAAGAACATTTGG 57.130 30.769 0.00 0.00 0.00 3.28
181 182 7.925483 TGTAAATTGACTCAAAGAACATTTGGG 59.075 33.333 0.00 0.00 36.04 4.12
182 183 6.484364 AATTGACTCAAAGAACATTTGGGT 57.516 33.333 5.58 5.58 45.00 4.51
186 187 4.536765 ACTCAAAGAACATTTGGGTCAGT 58.463 39.130 0.07 0.00 38.65 3.41
187 188 4.580580 ACTCAAAGAACATTTGGGTCAGTC 59.419 41.667 0.07 0.00 38.65 3.51
188 189 3.563808 TCAAAGAACATTTGGGTCAGTCG 59.436 43.478 0.90 0.00 0.00 4.18
189 190 3.485463 AAGAACATTTGGGTCAGTCGA 57.515 42.857 0.00 0.00 0.00 4.20
190 191 3.703001 AGAACATTTGGGTCAGTCGAT 57.297 42.857 0.00 0.00 0.00 3.59
191 192 3.338249 AGAACATTTGGGTCAGTCGATG 58.662 45.455 0.00 0.00 0.00 3.84
192 193 2.859165 ACATTTGGGTCAGTCGATGT 57.141 45.000 0.00 0.00 0.00 3.06
193 194 2.426522 ACATTTGGGTCAGTCGATGTG 58.573 47.619 0.00 0.00 0.00 3.21
194 195 2.224523 ACATTTGGGTCAGTCGATGTGT 60.225 45.455 0.00 0.00 0.00 3.72
195 196 2.631160 TTTGGGTCAGTCGATGTGTT 57.369 45.000 0.00 0.00 0.00 3.32
196 197 3.755112 TTTGGGTCAGTCGATGTGTTA 57.245 42.857 0.00 0.00 0.00 2.41
197 198 3.973206 TTGGGTCAGTCGATGTGTTAT 57.027 42.857 0.00 0.00 0.00 1.89
198 199 3.245518 TGGGTCAGTCGATGTGTTATG 57.754 47.619 0.00 0.00 0.00 1.90
199 200 2.829120 TGGGTCAGTCGATGTGTTATGA 59.171 45.455 0.00 0.00 0.00 2.15
200 201 3.119137 TGGGTCAGTCGATGTGTTATGAG 60.119 47.826 0.00 0.00 0.00 2.90
201 202 2.860735 GGTCAGTCGATGTGTTATGAGC 59.139 50.000 0.00 0.00 0.00 4.26
202 203 2.860735 GTCAGTCGATGTGTTATGAGCC 59.139 50.000 0.00 0.00 0.00 4.70
203 204 1.854743 CAGTCGATGTGTTATGAGCCG 59.145 52.381 0.00 0.00 0.00 5.52
204 205 1.476891 AGTCGATGTGTTATGAGCCGT 59.523 47.619 0.00 0.00 0.00 5.68
205 206 1.852895 GTCGATGTGTTATGAGCCGTC 59.147 52.381 0.00 0.00 0.00 4.79
206 207 0.846401 CGATGTGTTATGAGCCGTCG 59.154 55.000 0.00 0.00 0.00 5.12
207 208 1.209128 GATGTGTTATGAGCCGTCGG 58.791 55.000 6.99 6.99 0.00 4.79
208 209 0.821517 ATGTGTTATGAGCCGTCGGA 59.178 50.000 17.49 0.00 0.00 4.55
209 210 0.821517 TGTGTTATGAGCCGTCGGAT 59.178 50.000 17.49 9.33 0.00 4.18
210 211 1.209128 GTGTTATGAGCCGTCGGATG 58.791 55.000 17.49 0.00 0.00 3.51
211 212 0.529773 TGTTATGAGCCGTCGGATGC 60.530 55.000 17.49 3.64 0.00 3.91
212 213 0.529773 GTTATGAGCCGTCGGATGCA 60.530 55.000 17.49 9.77 0.00 3.96
213 214 0.176910 TTATGAGCCGTCGGATGCAA 59.823 50.000 17.49 0.00 0.00 4.08
214 215 0.249447 TATGAGCCGTCGGATGCAAG 60.249 55.000 17.49 0.00 0.00 4.01
215 216 1.960040 ATGAGCCGTCGGATGCAAGA 61.960 55.000 17.49 0.00 0.00 3.02
216 217 1.227380 GAGCCGTCGGATGCAAGAT 60.227 57.895 17.49 0.00 0.00 2.40
217 218 1.493950 GAGCCGTCGGATGCAAGATG 61.494 60.000 17.49 0.00 0.00 2.90
218 219 1.521457 GCCGTCGGATGCAAGATGA 60.521 57.895 17.49 0.00 0.00 2.92
219 220 1.089481 GCCGTCGGATGCAAGATGAA 61.089 55.000 17.49 0.00 0.00 2.57
220 221 1.586422 CCGTCGGATGCAAGATGAAT 58.414 50.000 4.91 0.00 0.00 2.57
221 222 2.754472 CCGTCGGATGCAAGATGAATA 58.246 47.619 4.91 0.00 0.00 1.75
222 223 2.733552 CCGTCGGATGCAAGATGAATAG 59.266 50.000 4.91 0.00 0.00 1.73
223 224 2.156504 CGTCGGATGCAAGATGAATAGC 59.843 50.000 0.00 0.00 0.00 2.97
224 225 3.397482 GTCGGATGCAAGATGAATAGCT 58.603 45.455 0.00 0.00 0.00 3.32
225 226 4.560128 GTCGGATGCAAGATGAATAGCTA 58.440 43.478 0.00 0.00 0.00 3.32
226 227 4.624882 GTCGGATGCAAGATGAATAGCTAG 59.375 45.833 0.00 0.00 0.00 3.42
227 228 3.931468 CGGATGCAAGATGAATAGCTAGG 59.069 47.826 0.00 0.00 0.00 3.02
228 229 4.562347 CGGATGCAAGATGAATAGCTAGGT 60.562 45.833 0.00 0.00 0.00 3.08
229 230 4.934602 GGATGCAAGATGAATAGCTAGGTC 59.065 45.833 0.00 0.00 0.00 3.85
230 231 3.982475 TGCAAGATGAATAGCTAGGTCG 58.018 45.455 0.00 0.00 0.00 4.79
231 232 3.243873 TGCAAGATGAATAGCTAGGTCGG 60.244 47.826 0.00 0.00 0.00 4.79
232 233 3.321497 CAAGATGAATAGCTAGGTCGGC 58.679 50.000 0.00 0.00 0.00 5.54
233 234 1.896465 AGATGAATAGCTAGGTCGGCC 59.104 52.381 0.00 0.00 0.00 6.13
235 236 1.789523 TGAATAGCTAGGTCGGCCTT 58.210 50.000 17.04 0.00 44.18 4.35
236 237 2.116238 TGAATAGCTAGGTCGGCCTTT 58.884 47.619 17.04 0.15 44.18 3.11
237 238 2.504175 TGAATAGCTAGGTCGGCCTTTT 59.496 45.455 17.04 2.37 44.18 2.27
238 239 3.707611 TGAATAGCTAGGTCGGCCTTTTA 59.292 43.478 17.04 4.97 44.18 1.52
239 240 3.747854 ATAGCTAGGTCGGCCTTTTAC 57.252 47.619 17.04 0.77 44.18 2.01
240 241 0.540454 AGCTAGGTCGGCCTTTTACC 59.460 55.000 17.04 3.04 44.18 2.85
241 242 0.463295 GCTAGGTCGGCCTTTTACCC 60.463 60.000 17.04 0.00 44.18 3.69
242 243 1.201424 CTAGGTCGGCCTTTTACCCT 58.799 55.000 17.04 0.00 44.18 4.34
243 244 1.138464 CTAGGTCGGCCTTTTACCCTC 59.862 57.143 17.04 0.00 44.18 4.30
244 245 1.077930 GGTCGGCCTTTTACCCTCC 60.078 63.158 0.00 0.00 0.00 4.30
245 246 1.559965 GGTCGGCCTTTTACCCTCCT 61.560 60.000 0.00 0.00 0.00 3.69
246 247 0.392595 GTCGGCCTTTTACCCTCCTG 60.393 60.000 0.00 0.00 0.00 3.86
247 248 1.749258 CGGCCTTTTACCCTCCTGC 60.749 63.158 0.00 0.00 0.00 4.85
248 249 1.379977 GGCCTTTTACCCTCCTGCC 60.380 63.158 0.00 0.00 0.00 4.85
249 250 1.379977 GCCTTTTACCCTCCTGCCC 60.380 63.158 0.00 0.00 0.00 5.36
250 251 1.864263 GCCTTTTACCCTCCTGCCCT 61.864 60.000 0.00 0.00 0.00 5.19
251 252 0.256177 CCTTTTACCCTCCTGCCCTC 59.744 60.000 0.00 0.00 0.00 4.30
252 253 1.290134 CTTTTACCCTCCTGCCCTCT 58.710 55.000 0.00 0.00 0.00 3.69
253 254 1.636003 CTTTTACCCTCCTGCCCTCTT 59.364 52.381 0.00 0.00 0.00 2.85
254 255 1.755200 TTTACCCTCCTGCCCTCTTT 58.245 50.000 0.00 0.00 0.00 2.52
255 256 1.755200 TTACCCTCCTGCCCTCTTTT 58.245 50.000 0.00 0.00 0.00 2.27
256 257 1.286248 TACCCTCCTGCCCTCTTTTC 58.714 55.000 0.00 0.00 0.00 2.29
257 258 0.772124 ACCCTCCTGCCCTCTTTTCA 60.772 55.000 0.00 0.00 0.00 2.69
258 259 0.627986 CCCTCCTGCCCTCTTTTCAT 59.372 55.000 0.00 0.00 0.00 2.57
259 260 1.409381 CCCTCCTGCCCTCTTTTCATC 60.409 57.143 0.00 0.00 0.00 2.92
260 261 1.409381 CCTCCTGCCCTCTTTTCATCC 60.409 57.143 0.00 0.00 0.00 3.51
261 262 1.563410 CTCCTGCCCTCTTTTCATCCT 59.437 52.381 0.00 0.00 0.00 3.24
262 263 1.561542 TCCTGCCCTCTTTTCATCCTC 59.438 52.381 0.00 0.00 0.00 3.71
263 264 1.661341 CTGCCCTCTTTTCATCCTCG 58.339 55.000 0.00 0.00 0.00 4.63
264 265 0.392998 TGCCCTCTTTTCATCCTCGC 60.393 55.000 0.00 0.00 0.00 5.03
265 266 1.098129 GCCCTCTTTTCATCCTCGCC 61.098 60.000 0.00 0.00 0.00 5.54
266 267 0.811616 CCCTCTTTTCATCCTCGCCG 60.812 60.000 0.00 0.00 0.00 6.46
267 268 1.432270 CCTCTTTTCATCCTCGCCGC 61.432 60.000 0.00 0.00 0.00 6.53
268 269 0.740868 CTCTTTTCATCCTCGCCGCA 60.741 55.000 0.00 0.00 0.00 5.69
269 270 0.107703 TCTTTTCATCCTCGCCGCAT 60.108 50.000 0.00 0.00 0.00 4.73
270 271 0.734889 CTTTTCATCCTCGCCGCATT 59.265 50.000 0.00 0.00 0.00 3.56
271 272 0.451383 TTTTCATCCTCGCCGCATTG 59.549 50.000 0.00 0.00 0.00 2.82
272 273 0.676466 TTTCATCCTCGCCGCATTGT 60.676 50.000 0.00 0.00 0.00 2.71
273 274 1.089481 TTCATCCTCGCCGCATTGTC 61.089 55.000 0.00 0.00 0.00 3.18
274 275 2.203070 ATCCTCGCCGCATTGTCC 60.203 61.111 0.00 0.00 0.00 4.02
275 276 3.757248 ATCCTCGCCGCATTGTCCC 62.757 63.158 0.00 0.00 0.00 4.46
277 278 4.473520 CTCGCCGCATTGTCCCCT 62.474 66.667 0.00 0.00 0.00 4.79
278 279 4.467084 TCGCCGCATTGTCCCCTC 62.467 66.667 0.00 0.00 0.00 4.30
281 282 4.506255 CCGCATTGTCCCCTCCCC 62.506 72.222 0.00 0.00 0.00 4.81
282 283 4.506255 CGCATTGTCCCCTCCCCC 62.506 72.222 0.00 0.00 0.00 5.40
302 303 4.596585 CCCCACCCACACACCCAC 62.597 72.222 0.00 0.00 0.00 4.61
303 304 3.814906 CCCACCCACACACCCACA 61.815 66.667 0.00 0.00 0.00 4.17
304 305 2.518349 CCACCCACACACCCACAC 60.518 66.667 0.00 0.00 0.00 3.82
305 306 2.273776 CACCCACACACCCACACA 59.726 61.111 0.00 0.00 0.00 3.72
306 307 2.118404 CACCCACACACCCACACAC 61.118 63.158 0.00 0.00 0.00 3.82
307 308 2.273776 CCCACACACCCACACACA 59.726 61.111 0.00 0.00 0.00 3.72
308 309 2.118404 CCCACACACCCACACACAC 61.118 63.158 0.00 0.00 0.00 3.82
309 310 1.377856 CCACACACCCACACACACA 60.378 57.895 0.00 0.00 0.00 3.72
310 311 1.653094 CCACACACCCACACACACAC 61.653 60.000 0.00 0.00 0.00 3.82
311 312 0.957888 CACACACCCACACACACACA 60.958 55.000 0.00 0.00 0.00 3.72
312 313 0.958382 ACACACCCACACACACACAC 60.958 55.000 0.00 0.00 0.00 3.82
313 314 0.957888 CACACCCACACACACACACA 60.958 55.000 0.00 0.00 0.00 3.72
314 315 0.958382 ACACCCACACACACACACAC 60.958 55.000 0.00 0.00 0.00 3.82
315 316 0.957888 CACCCACACACACACACACA 60.958 55.000 0.00 0.00 0.00 3.72
316 317 0.958382 ACCCACACACACACACACAC 60.958 55.000 0.00 0.00 0.00 3.82
317 318 1.653094 CCCACACACACACACACACC 61.653 60.000 0.00 0.00 0.00 4.16
318 319 1.423450 CACACACACACACACACCG 59.577 57.895 0.00 0.00 0.00 4.94
319 320 2.395360 ACACACACACACACACCGC 61.395 57.895 0.00 0.00 0.00 5.68
320 321 2.822255 ACACACACACACACCGCC 60.822 61.111 0.00 0.00 0.00 6.13
321 322 3.935872 CACACACACACACCGCCG 61.936 66.667 0.00 0.00 0.00 6.46
334 335 4.444024 CGCCGCACACCGTCATTG 62.444 66.667 0.00 0.00 34.38 2.82
335 336 4.759096 GCCGCACACCGTCATTGC 62.759 66.667 0.00 0.00 34.38 3.56
336 337 3.353029 CCGCACACCGTCATTGCA 61.353 61.111 0.00 0.00 35.93 4.08
337 338 2.174107 CGCACACCGTCATTGCAG 59.826 61.111 0.00 0.00 35.93 4.41
338 339 2.316867 CGCACACCGTCATTGCAGA 61.317 57.895 0.00 0.00 35.93 4.26
339 340 1.207593 GCACACCGTCATTGCAGAC 59.792 57.895 0.00 0.00 36.22 3.51
340 341 1.230635 GCACACCGTCATTGCAGACT 61.231 55.000 4.76 0.00 36.38 3.24
341 342 0.792640 CACACCGTCATTGCAGACTC 59.207 55.000 4.76 0.00 36.38 3.36
342 343 0.320771 ACACCGTCATTGCAGACTCC 60.321 55.000 4.76 0.00 36.38 3.85
343 344 1.079819 ACCGTCATTGCAGACTCCG 60.080 57.895 4.76 0.00 36.38 4.63
344 345 2.456119 CCGTCATTGCAGACTCCGC 61.456 63.158 4.76 0.00 36.38 5.54
345 346 2.456119 CGTCATTGCAGACTCCGCC 61.456 63.158 4.76 0.00 36.38 6.13
346 347 2.109126 GTCATTGCAGACTCCGCCC 61.109 63.158 0.00 0.00 35.65 6.13
347 348 2.270205 CATTGCAGACTCCGCCCT 59.730 61.111 0.00 0.00 0.00 5.19
348 349 2.110967 CATTGCAGACTCCGCCCTG 61.111 63.158 0.00 0.00 0.00 4.45
354 355 4.554036 GACTCCGCCCTGCCCATC 62.554 72.222 0.00 0.00 0.00 3.51
358 359 4.883354 CCGCCCTGCCCATCCTTC 62.883 72.222 0.00 0.00 0.00 3.46
359 360 3.801997 CGCCCTGCCCATCCTTCT 61.802 66.667 0.00 0.00 0.00 2.85
360 361 2.443394 CGCCCTGCCCATCCTTCTA 61.443 63.158 0.00 0.00 0.00 2.10
361 362 1.922821 GCCCTGCCCATCCTTCTAA 59.077 57.895 0.00 0.00 0.00 2.10
362 363 0.258774 GCCCTGCCCATCCTTCTAAA 59.741 55.000 0.00 0.00 0.00 1.85
363 364 1.133356 GCCCTGCCCATCCTTCTAAAT 60.133 52.381 0.00 0.00 0.00 1.40
364 365 2.690936 GCCCTGCCCATCCTTCTAAATT 60.691 50.000 0.00 0.00 0.00 1.82
365 366 2.961062 CCCTGCCCATCCTTCTAAATTG 59.039 50.000 0.00 0.00 0.00 2.32
366 367 2.961062 CCTGCCCATCCTTCTAAATTGG 59.039 50.000 0.00 0.00 0.00 3.16
367 368 2.363359 CTGCCCATCCTTCTAAATTGGC 59.637 50.000 0.00 0.00 34.96 4.52
368 369 1.338020 GCCCATCCTTCTAAATTGGCG 59.662 52.381 0.00 0.00 0.00 5.69
369 370 2.930950 CCCATCCTTCTAAATTGGCGA 58.069 47.619 0.00 0.00 0.00 5.54
370 371 2.618709 CCCATCCTTCTAAATTGGCGAC 59.381 50.000 0.00 0.00 0.00 5.19
371 372 2.618709 CCATCCTTCTAAATTGGCGACC 59.381 50.000 0.00 0.00 0.00 4.79
372 373 3.278574 CATCCTTCTAAATTGGCGACCA 58.721 45.455 0.00 0.00 0.00 4.02
373 374 2.706890 TCCTTCTAAATTGGCGACCAC 58.293 47.619 0.00 0.00 30.78 4.16
374 375 1.396996 CCTTCTAAATTGGCGACCACG 59.603 52.381 0.00 0.00 42.93 4.94
375 376 2.343101 CTTCTAAATTGGCGACCACGA 58.657 47.619 0.00 0.00 42.66 4.35
376 377 2.004583 TCTAAATTGGCGACCACGAG 57.995 50.000 0.00 0.00 42.66 4.18
377 378 1.274167 TCTAAATTGGCGACCACGAGT 59.726 47.619 0.00 0.00 42.66 4.18
378 379 2.073816 CTAAATTGGCGACCACGAGTT 58.926 47.619 0.00 0.00 42.66 3.01
379 380 1.314730 AAATTGGCGACCACGAGTTT 58.685 45.000 0.00 0.00 42.66 2.66
380 381 1.314730 AATTGGCGACCACGAGTTTT 58.685 45.000 0.00 0.00 42.66 2.43
381 382 1.314730 ATTGGCGACCACGAGTTTTT 58.685 45.000 0.00 0.00 42.66 1.94
396 397 3.437642 TTTTTCCCCAGTGAGCCTG 57.562 52.632 0.00 0.00 41.15 4.85
397 398 0.827507 TTTTTCCCCAGTGAGCCTGC 60.828 55.000 0.00 0.00 40.06 4.85
398 399 2.005606 TTTTCCCCAGTGAGCCTGCA 62.006 55.000 0.00 0.00 40.06 4.41
399 400 2.697147 TTTCCCCAGTGAGCCTGCAC 62.697 60.000 0.00 0.00 40.06 4.57
400 401 4.729918 CCCCAGTGAGCCTGCACC 62.730 72.222 0.00 0.00 40.06 5.01
401 402 4.729918 CCCAGTGAGCCTGCACCC 62.730 72.222 0.00 0.00 40.06 4.61
414 415 4.920112 CACCCGCACCCGTCAACA 62.920 66.667 0.00 0.00 0.00 3.33
415 416 3.948719 ACCCGCACCCGTCAACAT 61.949 61.111 0.00 0.00 0.00 2.71
416 417 2.671619 CCCGCACCCGTCAACATT 60.672 61.111 0.00 0.00 0.00 2.71
417 418 2.686816 CCCGCACCCGTCAACATTC 61.687 63.158 0.00 0.00 0.00 2.67
418 419 2.474266 CGCACCCGTCAACATTCG 59.526 61.111 0.00 0.00 0.00 3.34
419 420 2.867472 GCACCCGTCAACATTCGG 59.133 61.111 0.00 0.00 45.42 4.30
420 421 1.964373 GCACCCGTCAACATTCGGT 60.964 57.895 0.00 0.00 44.51 4.69
421 422 1.512156 GCACCCGTCAACATTCGGTT 61.512 55.000 0.00 0.00 44.51 4.44
422 423 0.515564 CACCCGTCAACATTCGGTTC 59.484 55.000 0.00 0.00 44.51 3.62
423 424 0.604511 ACCCGTCAACATTCGGTTCC 60.605 55.000 0.00 0.00 44.51 3.62
424 425 1.632046 CCCGTCAACATTCGGTTCCG 61.632 60.000 4.74 4.74 44.51 4.30
425 426 1.131826 CGTCAACATTCGGTTCCGC 59.868 57.895 6.35 0.00 37.72 5.54
426 427 1.561717 CGTCAACATTCGGTTCCGCA 61.562 55.000 6.35 0.00 37.72 5.69
427 428 0.802494 GTCAACATTCGGTTCCGCAT 59.198 50.000 6.35 0.00 37.72 4.73
428 429 1.083489 TCAACATTCGGTTCCGCATC 58.917 50.000 6.35 0.00 37.72 3.91
429 430 0.098728 CAACATTCGGTTCCGCATCC 59.901 55.000 6.35 0.00 37.72 3.51
430 431 1.366111 AACATTCGGTTCCGCATCCG 61.366 55.000 6.35 0.00 46.93 4.18
431 432 2.895372 ATTCGGTTCCGCATCCGC 60.895 61.111 6.35 0.00 45.44 5.54
436 437 4.814294 GTTCCGCATCCGCCGTCT 62.814 66.667 0.00 0.00 33.11 4.18
437 438 4.508128 TTCCGCATCCGCCGTCTC 62.508 66.667 0.00 0.00 33.11 3.36
442 443 4.498520 CATCCGCCGTCTCGCTGT 62.499 66.667 0.00 0.00 0.00 4.40
443 444 4.194720 ATCCGCCGTCTCGCTGTC 62.195 66.667 0.00 0.00 0.00 3.51
449 450 2.951745 CGTCTCGCTGTCGGATGC 60.952 66.667 0.00 0.00 36.13 3.91
450 451 2.181777 GTCTCGCTGTCGGATGCA 59.818 61.111 0.00 0.00 36.13 3.96
451 452 1.875813 GTCTCGCTGTCGGATGCAG 60.876 63.158 0.00 0.03 37.06 4.41
452 453 2.046285 TCTCGCTGTCGGATGCAGA 61.046 57.895 0.00 3.16 36.12 4.26
453 454 1.067084 CTCGCTGTCGGATGCAGAT 59.933 57.895 0.00 0.00 36.12 2.90
454 455 0.938637 CTCGCTGTCGGATGCAGATC 60.939 60.000 0.00 0.00 36.12 2.75
455 456 1.067084 CGCTGTCGGATGCAGATCT 59.933 57.895 0.00 0.00 36.12 2.75
456 457 0.529337 CGCTGTCGGATGCAGATCTT 60.529 55.000 0.00 0.00 36.12 2.40
457 458 0.935898 GCTGTCGGATGCAGATCTTG 59.064 55.000 0.00 0.00 36.12 3.02
467 468 3.359194 CAGATCTTGCCTGTCCGAG 57.641 57.895 0.00 0.00 0.00 4.63
468 469 0.809241 CAGATCTTGCCTGTCCGAGC 60.809 60.000 0.00 0.00 0.00 5.03
469 470 1.522580 GATCTTGCCTGTCCGAGCC 60.523 63.158 0.00 0.00 0.00 4.70
470 471 2.932130 GATCTTGCCTGTCCGAGCCC 62.932 65.000 0.00 0.00 0.00 5.19
471 472 3.710722 CTTGCCTGTCCGAGCCCT 61.711 66.667 0.00 0.00 0.00 5.19
472 473 3.249189 TTGCCTGTCCGAGCCCTT 61.249 61.111 0.00 0.00 0.00 3.95
473 474 3.551496 TTGCCTGTCCGAGCCCTTG 62.551 63.158 0.00 0.00 0.00 3.61
475 476 4.785453 CCTGTCCGAGCCCTTGCC 62.785 72.222 0.00 0.00 38.69 4.52
476 477 4.020617 CTGTCCGAGCCCTTGCCA 62.021 66.667 0.00 0.00 38.69 4.92
477 478 3.965539 CTGTCCGAGCCCTTGCCAG 62.966 68.421 0.00 0.00 38.69 4.85
478 479 4.021925 GTCCGAGCCCTTGCCAGT 62.022 66.667 0.00 0.00 38.69 4.00
479 480 4.020617 TCCGAGCCCTTGCCAGTG 62.021 66.667 0.00 0.00 38.69 3.66
480 481 4.335647 CCGAGCCCTTGCCAGTGT 62.336 66.667 0.00 0.00 38.69 3.55
481 482 2.743928 CGAGCCCTTGCCAGTGTC 60.744 66.667 0.00 0.00 38.69 3.67
482 483 2.360475 GAGCCCTTGCCAGTGTCC 60.360 66.667 0.00 0.00 38.69 4.02
483 484 2.856000 AGCCCTTGCCAGTGTCCT 60.856 61.111 0.00 0.00 38.69 3.85
484 485 2.360475 GCCCTTGCCAGTGTCCTC 60.360 66.667 0.00 0.00 0.00 3.71
485 486 2.046892 CCCTTGCCAGTGTCCTCG 60.047 66.667 0.00 0.00 0.00 4.63
486 487 2.046892 CCTTGCCAGTGTCCTCGG 60.047 66.667 0.00 0.00 0.00 4.63
487 488 2.046892 CTTGCCAGTGTCCTCGGG 60.047 66.667 0.00 0.00 0.00 5.14
488 489 4.329545 TTGCCAGTGTCCTCGGGC 62.330 66.667 3.96 3.96 46.05 6.13
491 492 3.775654 CCAGTGTCCTCGGGCCTC 61.776 72.222 0.84 0.00 0.00 4.70
492 493 4.135153 CAGTGTCCTCGGGCCTCG 62.135 72.222 0.84 4.76 40.90 4.63
496 497 4.083862 GTCCTCGGGCCTCGCTTT 62.084 66.667 0.84 0.00 39.05 3.51
497 498 4.082523 TCCTCGGGCCTCGCTTTG 62.083 66.667 0.84 0.00 39.05 2.77
499 500 4.767255 CTCGGGCCTCGCTTTGCT 62.767 66.667 0.84 0.00 39.05 3.91
500 501 4.329545 TCGGGCCTCGCTTTGCTT 62.330 61.111 0.84 0.00 39.05 3.91
501 502 4.107051 CGGGCCTCGCTTTGCTTG 62.107 66.667 0.84 0.00 0.00 4.01
502 503 2.985847 GGGCCTCGCTTTGCTTGT 60.986 61.111 0.84 0.00 0.00 3.16
503 504 2.563427 GGCCTCGCTTTGCTTGTC 59.437 61.111 0.00 0.00 0.00 3.18
504 505 2.563427 GCCTCGCTTTGCTTGTCC 59.437 61.111 0.00 0.00 0.00 4.02
505 506 1.968540 GCCTCGCTTTGCTTGTCCT 60.969 57.895 0.00 0.00 0.00 3.85
506 507 1.871772 CCTCGCTTTGCTTGTCCTG 59.128 57.895 0.00 0.00 0.00 3.86
507 508 1.580845 CCTCGCTTTGCTTGTCCTGG 61.581 60.000 0.00 0.00 0.00 4.45
508 509 2.192608 CTCGCTTTGCTTGTCCTGGC 62.193 60.000 0.00 0.00 0.00 4.85
509 510 2.256461 GCTTTGCTTGTCCTGGCG 59.744 61.111 0.00 0.00 0.00 5.69
510 511 2.256461 CTTTGCTTGTCCTGGCGC 59.744 61.111 0.00 0.00 0.00 6.53
511 512 3.273080 CTTTGCTTGTCCTGGCGCC 62.273 63.158 22.73 22.73 0.00 6.53
529 530 4.479993 GCCACCTGCAGCCTCGAT 62.480 66.667 8.66 0.00 40.77 3.59
530 531 2.513204 CCACCTGCAGCCTCGATG 60.513 66.667 8.66 0.00 0.00 3.84
531 532 3.200593 CACCTGCAGCCTCGATGC 61.201 66.667 8.66 4.31 45.81 3.91
532 533 3.397439 ACCTGCAGCCTCGATGCT 61.397 61.111 9.61 9.61 45.80 3.79
533 534 2.588314 CCTGCAGCCTCGATGCTC 60.588 66.667 12.63 8.41 45.80 4.26
534 535 2.588314 CTGCAGCCTCGATGCTCC 60.588 66.667 12.63 4.24 45.80 4.70
535 536 4.519437 TGCAGCCTCGATGCTCCG 62.519 66.667 12.63 4.02 45.80 4.63
555 556 2.747855 CAACCGCTGCTTCCTCCC 60.748 66.667 0.00 0.00 0.00 4.30
556 557 2.930562 AACCGCTGCTTCCTCCCT 60.931 61.111 0.00 0.00 0.00 4.20
557 558 2.960688 AACCGCTGCTTCCTCCCTC 61.961 63.158 0.00 0.00 0.00 4.30
558 559 4.168291 CCGCTGCTTCCTCCCTCC 62.168 72.222 0.00 0.00 0.00 4.30
559 560 4.168291 CGCTGCTTCCTCCCTCCC 62.168 72.222 0.00 0.00 0.00 4.30
560 561 3.803162 GCTGCTTCCTCCCTCCCC 61.803 72.222 0.00 0.00 0.00 4.81
561 562 2.041928 CTGCTTCCTCCCTCCCCT 59.958 66.667 0.00 0.00 0.00 4.79
562 563 2.041265 TGCTTCCTCCCTCCCCTC 59.959 66.667 0.00 0.00 0.00 4.30
563 564 2.770475 GCTTCCTCCCTCCCCTCC 60.770 72.222 0.00 0.00 0.00 4.30
564 565 2.040359 CTTCCTCCCTCCCCTCCC 60.040 72.222 0.00 0.00 0.00 4.30
565 566 3.707189 TTCCTCCCTCCCCTCCCC 61.707 72.222 0.00 0.00 0.00 4.81
568 569 4.179599 CTCCCTCCCCTCCCCCTC 62.180 77.778 0.00 0.00 0.00 4.30
583 584 3.189646 CTCCCCCACACCCCCAAA 61.190 66.667 0.00 0.00 0.00 3.28
584 585 2.704198 TCCCCCACACCCCCAAAA 60.704 61.111 0.00 0.00 0.00 2.44
585 586 2.287251 CCCCCACACCCCCAAAAA 59.713 61.111 0.00 0.00 0.00 1.94
609 610 9.748708 AAAAATTTGACTGATCGAGATTTGAAA 57.251 25.926 0.00 0.00 0.00 2.69
610 611 9.918630 AAAATTTGACTGATCGAGATTTGAAAT 57.081 25.926 0.00 0.00 0.00 2.17
611 612 9.918630 AAATTTGACTGATCGAGATTTGAAATT 57.081 25.926 0.00 0.00 0.00 1.82
612 613 9.565213 AATTTGACTGATCGAGATTTGAAATTC 57.435 29.630 0.00 0.00 0.00 2.17
613 614 7.671495 TTGACTGATCGAGATTTGAAATTCA 57.329 32.000 0.00 0.00 0.00 2.57
614 615 7.299787 TGACTGATCGAGATTTGAAATTCAG 57.700 36.000 12.54 12.54 36.35 3.02
615 616 6.116680 ACTGATCGAGATTTGAAATTCAGC 57.883 37.500 13.57 0.00 34.19 4.26
616 617 5.065731 ACTGATCGAGATTTGAAATTCAGCC 59.934 40.000 13.57 0.00 34.19 4.85
617 618 4.034394 TGATCGAGATTTGAAATTCAGCCG 59.966 41.667 0.00 0.00 0.00 5.52
618 619 3.595173 TCGAGATTTGAAATTCAGCCGA 58.405 40.909 0.00 0.34 0.00 5.54
619 620 3.370978 TCGAGATTTGAAATTCAGCCGAC 59.629 43.478 0.00 0.00 0.00 4.79
620 621 3.372206 CGAGATTTGAAATTCAGCCGACT 59.628 43.478 0.00 0.00 0.00 4.18
621 622 4.656041 GAGATTTGAAATTCAGCCGACTG 58.344 43.478 0.00 0.00 45.95 3.51
637 638 1.781555 CTGACGTGCAGCTAAACCG 59.218 57.895 0.00 0.00 37.90 4.44
638 639 1.626654 CTGACGTGCAGCTAAACCGG 61.627 60.000 0.00 0.00 37.90 5.28
650 651 5.296035 GCAGCTAAACCGGACTAAAATACAT 59.704 40.000 9.46 0.00 0.00 2.29
660 661 8.724229 ACCGGACTAAAATACATAAACAGAAAC 58.276 33.333 9.46 0.00 0.00 2.78
675 676 3.636300 ACAGAAACCACTGCATTTGCTAA 59.364 39.130 3.94 0.00 41.06 3.09
676 677 4.232221 CAGAAACCACTGCATTTGCTAAG 58.768 43.478 3.94 0.00 42.66 2.18
677 678 2.730550 AACCACTGCATTTGCTAAGC 57.269 45.000 3.94 0.00 42.66 3.09
681 682 2.512885 CACTGCATTTGCTAAGCTTCG 58.487 47.619 0.00 0.00 42.66 3.79
684 685 3.751175 ACTGCATTTGCTAAGCTTCGTTA 59.249 39.130 0.00 0.00 42.66 3.18
686 687 3.751175 TGCATTTGCTAAGCTTCGTTACT 59.249 39.130 0.00 0.00 42.66 2.24
698 699 6.771188 AGCTTCGTTACTGACAATATATGC 57.229 37.500 0.00 0.00 0.00 3.14
700 701 6.201044 AGCTTCGTTACTGACAATATATGCAC 59.799 38.462 0.00 0.00 0.00 4.57
701 702 6.564125 GCTTCGTTACTGACAATATATGCACC 60.564 42.308 0.00 0.00 0.00 5.01
702 703 5.908341 TCGTTACTGACAATATATGCACCA 58.092 37.500 0.00 0.00 0.00 4.17
731 733 4.389374 ACCGAAGAGACAAACATGACATT 58.611 39.130 0.00 0.00 0.00 2.71
755 757 5.955959 TCCAAGGCAGAGTAGAGTAACATAA 59.044 40.000 0.00 0.00 0.00 1.90
756 758 6.043411 CCAAGGCAGAGTAGAGTAACATAAC 58.957 44.000 0.00 0.00 0.00 1.89
757 759 6.351033 CCAAGGCAGAGTAGAGTAACATAACA 60.351 42.308 0.00 0.00 0.00 2.41
759 761 8.414003 CAAGGCAGAGTAGAGTAACATAACATA 58.586 37.037 0.00 0.00 0.00 2.29
760 762 7.942990 AGGCAGAGTAGAGTAACATAACATAC 58.057 38.462 0.00 0.00 0.00 2.39
761 763 7.560262 AGGCAGAGTAGAGTAACATAACATACA 59.440 37.037 0.00 0.00 0.00 2.29
762 764 8.361139 GGCAGAGTAGAGTAACATAACATACAT 58.639 37.037 0.00 0.00 0.00 2.29
772 774 8.148351 AGTAACATAACATACATAAGCCACGAT 58.852 33.333 0.00 0.00 0.00 3.73
777 779 9.150348 CATAACATACATAAGCCACGATCATAA 57.850 33.333 0.00 0.00 0.00 1.90
885 889 9.933723 CTATCTGAAAATTTCAAACCATCCTTT 57.066 29.630 9.85 0.00 39.58 3.11
1476 1503 0.109781 CCGCATACACCACAAGCAAC 60.110 55.000 0.00 0.00 0.00 4.17
1617 1650 0.544595 AGGTCTACAGGCCGGACTTT 60.545 55.000 7.41 2.93 0.00 2.66
1626 1659 3.121030 CCGGACTTTGCTGCTCCG 61.121 66.667 17.98 17.98 45.49 4.63
1653 1686 1.986757 TGCAGAGGAGCTGGAGTCC 60.987 63.158 0.73 0.73 45.03 3.85
1936 1969 2.436824 GCTTCTTCCTCACCCCGC 60.437 66.667 0.00 0.00 0.00 6.13
2031 2064 5.752472 TGTATGCATGTCAAACTTGGTTTTG 59.248 36.000 10.16 0.00 37.75 2.44
2150 2183 5.789643 ATTTGTTGTGTGGTTTAGCAGAT 57.210 34.783 0.00 0.00 0.00 2.90
2210 2264 2.083774 TGTTCGGCATGGATGAGAAAC 58.916 47.619 0.00 0.00 31.42 2.78
2229 2293 5.186409 AGAAACCGGCATGTTCTACTAGTAA 59.814 40.000 0.00 0.00 0.00 2.24
2257 2321 1.341383 GGGGTTGTCCATCAGATTGCT 60.341 52.381 0.00 0.00 37.22 3.91
2290 2354 4.191544 CAGGAAACCTCGATTGAGCAATA 58.808 43.478 4.21 0.00 41.13 1.90
2317 2382 3.696281 TGCTGCAATGGATTACGAATG 57.304 42.857 0.00 0.00 0.00 2.67
2320 2385 3.624900 CTGCAATGGATTACGAATGCTG 58.375 45.455 0.00 0.00 34.97 4.41
2322 2387 2.287788 GCAATGGATTACGAATGCTGGG 60.288 50.000 0.00 0.00 0.00 4.45
2361 2426 7.552687 TGATCAAATGAGCCGAACTAAAATACT 59.447 33.333 0.00 0.00 0.00 2.12
2366 2431 4.941263 TGAGCCGAACTAAAATACTGCAAT 59.059 37.500 0.00 0.00 0.00 3.56
2370 2436 7.639945 AGCCGAACTAAAATACTGCAATATTC 58.360 34.615 0.12 0.00 0.00 1.75
2390 2456 3.290710 TCCTTCCTGCATTTGCTATTCC 58.709 45.455 3.94 0.00 42.66 3.01
2477 2543 2.340809 CCACGGCGACACCAAGTA 59.659 61.111 16.62 0.00 39.03 2.24
2489 2555 0.689055 ACCAAGTAAGGAACGACCCC 59.311 55.000 0.00 0.00 40.05 4.95
2558 2624 3.752167 GGAGGAGGGAGGGTCGGA 61.752 72.222 0.00 0.00 0.00 4.55
2568 2634 1.112950 GAGGGTCGGAGTTTAGAGGG 58.887 60.000 0.00 0.00 0.00 4.30
2588 2654 1.841302 ATGACTGAAGGCGGCAAGGA 61.841 55.000 13.08 0.00 0.00 3.36
2680 2746 5.013079 TCCAGACAACTCACAATTAGGTCAT 59.987 40.000 0.00 0.00 0.00 3.06
2682 2748 5.062683 CAGACAACTCACAATTAGGTCATCG 59.937 44.000 0.00 0.00 0.00 3.84
2686 2752 1.134220 TCACAATTAGGTCATCGCCCC 60.134 52.381 0.00 0.00 0.00 5.80
2687 2753 0.179056 ACAATTAGGTCATCGCCCCG 60.179 55.000 0.00 0.00 0.00 5.73
2710 2776 2.952310 GGAAATATCAGGTGCTCCCAAC 59.048 50.000 0.00 0.00 34.66 3.77
2713 2779 1.668826 TATCAGGTGCTCCCAACCTT 58.331 50.000 0.00 0.00 34.66 3.50
2714 2780 1.668826 ATCAGGTGCTCCCAACCTTA 58.331 50.000 0.00 0.00 34.66 2.69
2715 2781 0.984230 TCAGGTGCTCCCAACCTTAG 59.016 55.000 0.00 0.00 34.66 2.18
2716 2782 0.035056 CAGGTGCTCCCAACCTTAGG 60.035 60.000 0.00 0.00 34.66 2.69
2719 2785 0.322546 GTGCTCCCAACCTTAGGGTG 60.323 60.000 9.79 9.79 46.67 4.61
2721 2787 2.387952 CTCCCAACCTTAGGGTGCT 58.612 57.895 11.50 0.00 46.67 4.40
2722 2788 0.253327 CTCCCAACCTTAGGGTGCTC 59.747 60.000 11.50 0.00 46.67 4.26
2723 2789 0.178873 TCCCAACCTTAGGGTGCTCT 60.179 55.000 11.50 0.00 46.67 4.09
2724 2790 0.253327 CCCAACCTTAGGGTGCTCTC 59.747 60.000 11.50 0.00 46.67 3.20
2725 2791 0.253327 CCAACCTTAGGGTGCTCTCC 59.747 60.000 11.50 0.00 46.67 3.71
2726 2792 0.984230 CAACCTTAGGGTGCTCTCCA 59.016 55.000 2.28 0.00 46.67 3.86
2727 2793 1.351017 CAACCTTAGGGTGCTCTCCAA 59.649 52.381 2.28 0.00 46.67 3.53
2728 2794 1.280457 ACCTTAGGGTGCTCTCCAAG 58.720 55.000 2.32 0.00 45.43 3.61
2729 2795 2.793954 ACCTTAGGGTGCTCTCCAAGC 61.794 57.143 2.32 0.00 45.43 4.01
2821 2888 6.887626 TGTGACTACAACCCCTAAAAATTC 57.112 37.500 0.00 0.00 32.88 2.17
2833 2900 5.512404 CCCCTAAAAATTCCAGGTCCAAAAC 60.512 44.000 0.00 0.00 0.00 2.43
2853 2920 4.370094 ACCCAAATGCACATTGGAAAAT 57.630 36.364 26.84 11.76 0.00 1.82
2887 2956 8.587608 ACAAATCCAAATGTGAATAGTGTCAAT 58.412 29.630 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 5.822519 TGCATCACCACTATAATTGACCTTC 59.177 40.000 0.00 0.00 0.00 3.46
47 48 7.147312 CCTTTCAAGACAAAATTAGTGCATCA 58.853 34.615 0.00 0.00 0.00 3.07
52 53 6.697019 CCACACCTTTCAAGACAAAATTAGTG 59.303 38.462 0.00 0.00 0.00 2.74
53 54 6.379988 ACCACACCTTTCAAGACAAAATTAGT 59.620 34.615 0.00 0.00 0.00 2.24
54 55 6.697019 CACCACACCTTTCAAGACAAAATTAG 59.303 38.462 0.00 0.00 0.00 1.73
55 56 6.378564 TCACCACACCTTTCAAGACAAAATTA 59.621 34.615 0.00 0.00 0.00 1.40
56 57 5.186797 TCACCACACCTTTCAAGACAAAATT 59.813 36.000 0.00 0.00 0.00 1.82
57 58 4.709397 TCACCACACCTTTCAAGACAAAAT 59.291 37.500 0.00 0.00 0.00 1.82
58 59 4.082845 TCACCACACCTTTCAAGACAAAA 58.917 39.130 0.00 0.00 0.00 2.44
59 60 3.691575 TCACCACACCTTTCAAGACAAA 58.308 40.909 0.00 0.00 0.00 2.83
60 61 3.358111 TCACCACACCTTTCAAGACAA 57.642 42.857 0.00 0.00 0.00 3.18
61 62 3.213506 CATCACCACACCTTTCAAGACA 58.786 45.455 0.00 0.00 0.00 3.41
62 63 2.030805 GCATCACCACACCTTTCAAGAC 60.031 50.000 0.00 0.00 0.00 3.01
63 64 2.229792 GCATCACCACACCTTTCAAGA 58.770 47.619 0.00 0.00 0.00 3.02
64 65 1.955778 TGCATCACCACACCTTTCAAG 59.044 47.619 0.00 0.00 0.00 3.02
65 66 1.680735 GTGCATCACCACACCTTTCAA 59.319 47.619 0.00 0.00 35.80 2.69
66 67 1.133823 AGTGCATCACCACACCTTTCA 60.134 47.619 0.00 0.00 38.18 2.69
67 68 1.609208 AGTGCATCACCACACCTTTC 58.391 50.000 0.00 0.00 38.18 2.62
68 69 2.504367 GTAGTGCATCACCACACCTTT 58.496 47.619 0.00 0.00 38.18 3.11
69 70 1.271379 GGTAGTGCATCACCACACCTT 60.271 52.381 13.30 0.00 38.18 3.50
70 71 0.324943 GGTAGTGCATCACCACACCT 59.675 55.000 13.30 0.00 38.18 4.00
71 72 0.036164 TGGTAGTGCATCACCACACC 59.964 55.000 16.14 4.16 39.91 4.16
72 73 3.623848 TGGTAGTGCATCACCACAC 57.376 52.632 16.14 0.00 39.91 3.82
77 78 0.036164 TGGTGGTGGTAGTGCATCAC 59.964 55.000 0.00 0.00 34.10 3.06
78 79 0.767998 TTGGTGGTGGTAGTGCATCA 59.232 50.000 0.00 0.00 0.00 3.07
79 80 2.017049 GATTGGTGGTGGTAGTGCATC 58.983 52.381 0.00 0.00 0.00 3.91
80 81 1.635487 AGATTGGTGGTGGTAGTGCAT 59.365 47.619 0.00 0.00 0.00 3.96
81 82 1.003118 GAGATTGGTGGTGGTAGTGCA 59.997 52.381 0.00 0.00 0.00 4.57
82 83 1.279271 AGAGATTGGTGGTGGTAGTGC 59.721 52.381 0.00 0.00 0.00 4.40
83 84 2.567169 TGAGAGATTGGTGGTGGTAGTG 59.433 50.000 0.00 0.00 0.00 2.74
84 85 2.902608 TGAGAGATTGGTGGTGGTAGT 58.097 47.619 0.00 0.00 0.00 2.73
85 86 3.600388 GTTGAGAGATTGGTGGTGGTAG 58.400 50.000 0.00 0.00 0.00 3.18
86 87 2.304761 GGTTGAGAGATTGGTGGTGGTA 59.695 50.000 0.00 0.00 0.00 3.25
87 88 1.073923 GGTTGAGAGATTGGTGGTGGT 59.926 52.381 0.00 0.00 0.00 4.16
88 89 1.352352 AGGTTGAGAGATTGGTGGTGG 59.648 52.381 0.00 0.00 0.00 4.61
89 90 2.867109 AGGTTGAGAGATTGGTGGTG 57.133 50.000 0.00 0.00 0.00 4.17
90 91 3.261897 CACTAGGTTGAGAGATTGGTGGT 59.738 47.826 0.00 0.00 0.00 4.16
91 92 3.515502 TCACTAGGTTGAGAGATTGGTGG 59.484 47.826 0.00 0.00 0.00 4.61
92 93 4.808414 TCACTAGGTTGAGAGATTGGTG 57.192 45.455 0.00 0.00 0.00 4.17
93 94 5.104735 GGAATCACTAGGTTGAGAGATTGGT 60.105 44.000 0.00 0.00 37.03 3.67
94 95 5.104776 TGGAATCACTAGGTTGAGAGATTGG 60.105 44.000 0.00 0.00 37.03 3.16
95 96 5.814705 GTGGAATCACTAGGTTGAGAGATTG 59.185 44.000 0.00 0.00 37.03 2.67
96 97 5.104735 GGTGGAATCACTAGGTTGAGAGATT 60.105 44.000 0.00 0.00 43.17 2.40
97 98 4.407296 GGTGGAATCACTAGGTTGAGAGAT 59.593 45.833 0.00 0.00 43.17 2.75
98 99 3.769844 GGTGGAATCACTAGGTTGAGAGA 59.230 47.826 0.00 0.00 43.17 3.10
99 100 3.515502 TGGTGGAATCACTAGGTTGAGAG 59.484 47.826 0.00 0.00 43.17 3.20
100 101 3.260884 GTGGTGGAATCACTAGGTTGAGA 59.739 47.826 0.00 0.00 43.17 3.27
101 102 3.007940 TGTGGTGGAATCACTAGGTTGAG 59.992 47.826 0.00 0.00 43.17 3.02
102 103 2.976185 TGTGGTGGAATCACTAGGTTGA 59.024 45.455 0.00 0.00 43.17 3.18
103 104 3.417069 TGTGGTGGAATCACTAGGTTG 57.583 47.619 0.00 0.00 43.17 3.77
104 105 3.650942 TCTTGTGGTGGAATCACTAGGTT 59.349 43.478 0.00 0.00 43.17 3.50
105 106 3.248024 TCTTGTGGTGGAATCACTAGGT 58.752 45.455 0.00 0.00 43.17 3.08
106 107 3.369892 CCTCTTGTGGTGGAATCACTAGG 60.370 52.174 0.00 0.00 43.17 3.02
107 108 3.261897 ACCTCTTGTGGTGGAATCACTAG 59.738 47.826 0.00 0.00 43.17 2.57
108 109 3.248024 ACCTCTTGTGGTGGAATCACTA 58.752 45.455 0.00 0.00 43.17 2.74
109 110 2.057922 ACCTCTTGTGGTGGAATCACT 58.942 47.619 0.00 0.00 43.17 3.41
110 111 2.568623 ACCTCTTGTGGTGGAATCAC 57.431 50.000 0.00 0.00 42.91 3.06
111 112 4.288366 TCATTACCTCTTGTGGTGGAATCA 59.712 41.667 4.80 0.00 41.05 2.57
112 113 4.636206 GTCATTACCTCTTGTGGTGGAATC 59.364 45.833 4.80 0.00 41.05 2.52
113 114 4.289672 AGTCATTACCTCTTGTGGTGGAAT 59.710 41.667 4.80 0.00 41.05 3.01
114 115 3.650942 AGTCATTACCTCTTGTGGTGGAA 59.349 43.478 4.80 0.00 41.05 3.53
115 116 3.248024 AGTCATTACCTCTTGTGGTGGA 58.752 45.455 4.80 0.00 41.05 4.02
116 117 3.703001 AGTCATTACCTCTTGTGGTGG 57.297 47.619 4.80 0.00 41.05 4.61
117 118 5.977635 TCATAGTCATTACCTCTTGTGGTG 58.022 41.667 4.80 0.00 41.05 4.17
118 119 6.408548 CCATCATAGTCATTACCTCTTGTGGT 60.409 42.308 0.02 0.02 43.66 4.16
119 120 5.994054 CCATCATAGTCATTACCTCTTGTGG 59.006 44.000 0.00 0.00 0.00 4.17
120 121 6.703607 GTCCATCATAGTCATTACCTCTTGTG 59.296 42.308 0.00 0.00 0.00 3.33
121 122 6.183361 GGTCCATCATAGTCATTACCTCTTGT 60.183 42.308 0.00 0.00 0.00 3.16
122 123 6.042552 AGGTCCATCATAGTCATTACCTCTTG 59.957 42.308 0.00 0.00 30.31 3.02
123 124 6.042552 CAGGTCCATCATAGTCATTACCTCTT 59.957 42.308 0.00 0.00 33.90 2.85
124 125 5.541868 CAGGTCCATCATAGTCATTACCTCT 59.458 44.000 0.00 0.00 33.90 3.69
125 126 5.279708 CCAGGTCCATCATAGTCATTACCTC 60.280 48.000 0.00 0.00 33.90 3.85
126 127 4.594920 CCAGGTCCATCATAGTCATTACCT 59.405 45.833 0.00 0.00 36.55 3.08
127 128 4.804261 GCCAGGTCCATCATAGTCATTACC 60.804 50.000 0.00 0.00 0.00 2.85
128 129 4.040952 AGCCAGGTCCATCATAGTCATTAC 59.959 45.833 0.00 0.00 0.00 1.89
129 130 4.234550 AGCCAGGTCCATCATAGTCATTA 58.765 43.478 0.00 0.00 0.00 1.90
130 131 3.051581 AGCCAGGTCCATCATAGTCATT 58.948 45.455 0.00 0.00 0.00 2.57
131 132 2.699160 AGCCAGGTCCATCATAGTCAT 58.301 47.619 0.00 0.00 0.00 3.06
132 133 2.180946 AGCCAGGTCCATCATAGTCA 57.819 50.000 0.00 0.00 0.00 3.41
133 134 2.028567 GCTAGCCAGGTCCATCATAGTC 60.029 54.545 2.29 0.00 0.00 2.59
134 135 1.974236 GCTAGCCAGGTCCATCATAGT 59.026 52.381 2.29 0.00 0.00 2.12
135 136 2.028294 CAGCTAGCCAGGTCCATCATAG 60.028 54.545 12.13 0.00 0.00 2.23
136 137 1.973515 CAGCTAGCCAGGTCCATCATA 59.026 52.381 12.13 0.00 0.00 2.15
137 138 0.763652 CAGCTAGCCAGGTCCATCAT 59.236 55.000 12.13 0.00 0.00 2.45
138 139 0.618680 ACAGCTAGCCAGGTCCATCA 60.619 55.000 12.13 0.00 0.00 3.07
139 140 1.414158 TACAGCTAGCCAGGTCCATC 58.586 55.000 12.13 0.00 0.00 3.51
140 141 1.879575 TTACAGCTAGCCAGGTCCAT 58.120 50.000 12.13 0.00 0.00 3.41
141 142 1.651737 TTTACAGCTAGCCAGGTCCA 58.348 50.000 12.13 0.00 0.00 4.02
142 143 2.945668 CAATTTACAGCTAGCCAGGTCC 59.054 50.000 12.13 0.00 0.00 4.46
143 144 3.623510 GTCAATTTACAGCTAGCCAGGTC 59.376 47.826 12.13 0.00 0.00 3.85
144 145 3.264450 AGTCAATTTACAGCTAGCCAGGT 59.736 43.478 12.13 10.24 0.00 4.00
145 146 3.873952 GAGTCAATTTACAGCTAGCCAGG 59.126 47.826 12.13 3.94 0.00 4.45
146 147 4.507710 TGAGTCAATTTACAGCTAGCCAG 58.492 43.478 12.13 7.21 0.00 4.85
147 148 4.551702 TGAGTCAATTTACAGCTAGCCA 57.448 40.909 12.13 0.00 0.00 4.75
148 149 5.643777 TCTTTGAGTCAATTTACAGCTAGCC 59.356 40.000 12.13 0.00 0.00 3.93
149 150 6.727824 TCTTTGAGTCAATTTACAGCTAGC 57.272 37.500 6.62 6.62 0.00 3.42
150 151 8.087982 TGTTCTTTGAGTCAATTTACAGCTAG 57.912 34.615 6.36 0.00 0.00 3.42
151 152 8.621532 ATGTTCTTTGAGTCAATTTACAGCTA 57.378 30.769 6.36 0.00 0.00 3.32
152 153 6.942532 TGTTCTTTGAGTCAATTTACAGCT 57.057 33.333 6.36 0.00 0.00 4.24
153 154 8.482429 CAAATGTTCTTTGAGTCAATTTACAGC 58.518 33.333 6.36 0.00 0.00 4.40
154 155 8.971321 CCAAATGTTCTTTGAGTCAATTTACAG 58.029 33.333 6.36 0.62 0.00 2.74
155 156 7.925483 CCCAAATGTTCTTTGAGTCAATTTACA 59.075 33.333 6.36 10.91 0.00 2.41
156 157 7.926018 ACCCAAATGTTCTTTGAGTCAATTTAC 59.074 33.333 6.36 5.72 0.00 2.01
157 158 8.017418 ACCCAAATGTTCTTTGAGTCAATTTA 57.983 30.769 6.36 0.00 0.00 1.40
158 159 6.888105 ACCCAAATGTTCTTTGAGTCAATTT 58.112 32.000 6.36 0.23 0.00 1.82
159 160 6.098124 TGACCCAAATGTTCTTTGAGTCAATT 59.902 34.615 6.36 0.00 41.79 2.32
160 161 5.598005 TGACCCAAATGTTCTTTGAGTCAAT 59.402 36.000 6.36 0.00 41.79 2.57
161 162 4.952957 TGACCCAAATGTTCTTTGAGTCAA 59.047 37.500 11.15 0.08 41.79 3.18
162 163 4.531854 TGACCCAAATGTTCTTTGAGTCA 58.468 39.130 9.93 9.93 42.25 3.41
163 164 4.580580 ACTGACCCAAATGTTCTTTGAGTC 59.419 41.667 5.67 5.67 37.56 3.36
164 165 4.536765 ACTGACCCAAATGTTCTTTGAGT 58.463 39.130 0.00 0.00 0.00 3.41
165 166 4.319766 CGACTGACCCAAATGTTCTTTGAG 60.320 45.833 0.00 0.00 0.00 3.02
166 167 3.563808 CGACTGACCCAAATGTTCTTTGA 59.436 43.478 0.00 0.00 0.00 2.69
167 168 3.563808 TCGACTGACCCAAATGTTCTTTG 59.436 43.478 0.00 0.00 0.00 2.77
168 169 3.815809 TCGACTGACCCAAATGTTCTTT 58.184 40.909 0.00 0.00 0.00 2.52
169 170 3.485463 TCGACTGACCCAAATGTTCTT 57.515 42.857 0.00 0.00 0.00 2.52
170 171 3.244561 ACATCGACTGACCCAAATGTTCT 60.245 43.478 0.00 0.00 0.00 3.01
171 172 3.074412 ACATCGACTGACCCAAATGTTC 58.926 45.455 0.00 0.00 0.00 3.18
172 173 2.813754 CACATCGACTGACCCAAATGTT 59.186 45.455 0.00 0.00 0.00 2.71
173 174 2.224523 ACACATCGACTGACCCAAATGT 60.225 45.455 0.00 0.00 0.00 2.71
174 175 2.426522 ACACATCGACTGACCCAAATG 58.573 47.619 0.00 0.00 0.00 2.32
175 176 2.859165 ACACATCGACTGACCCAAAT 57.141 45.000 0.00 0.00 0.00 2.32
176 177 2.631160 AACACATCGACTGACCCAAA 57.369 45.000 0.00 0.00 0.00 3.28
177 178 3.259625 TCATAACACATCGACTGACCCAA 59.740 43.478 0.00 0.00 0.00 4.12
178 179 2.829120 TCATAACACATCGACTGACCCA 59.171 45.455 0.00 0.00 0.00 4.51
179 180 3.448686 CTCATAACACATCGACTGACCC 58.551 50.000 0.00 0.00 0.00 4.46
180 181 2.860735 GCTCATAACACATCGACTGACC 59.139 50.000 0.00 0.00 0.00 4.02
181 182 2.860735 GGCTCATAACACATCGACTGAC 59.139 50.000 0.00 0.00 0.00 3.51
182 183 2.479560 CGGCTCATAACACATCGACTGA 60.480 50.000 0.00 0.00 0.00 3.41
183 184 1.854743 CGGCTCATAACACATCGACTG 59.145 52.381 0.00 0.00 0.00 3.51
184 185 1.476891 ACGGCTCATAACACATCGACT 59.523 47.619 0.00 0.00 0.00 4.18
185 186 1.852895 GACGGCTCATAACACATCGAC 59.147 52.381 0.00 0.00 0.00 4.20
186 187 1.533129 CGACGGCTCATAACACATCGA 60.533 52.381 0.00 0.00 0.00 3.59
187 188 0.846401 CGACGGCTCATAACACATCG 59.154 55.000 0.00 0.00 0.00 3.84
188 189 1.202371 TCCGACGGCTCATAACACATC 60.202 52.381 9.66 0.00 0.00 3.06
189 190 0.821517 TCCGACGGCTCATAACACAT 59.178 50.000 9.66 0.00 0.00 3.21
190 191 0.821517 ATCCGACGGCTCATAACACA 59.178 50.000 9.66 0.00 0.00 3.72
191 192 1.209128 CATCCGACGGCTCATAACAC 58.791 55.000 9.66 0.00 0.00 3.32
192 193 0.529773 GCATCCGACGGCTCATAACA 60.530 55.000 9.66 0.00 0.00 2.41
193 194 0.529773 TGCATCCGACGGCTCATAAC 60.530 55.000 9.66 0.00 0.00 1.89
194 195 0.176910 TTGCATCCGACGGCTCATAA 59.823 50.000 9.66 0.00 0.00 1.90
195 196 0.249447 CTTGCATCCGACGGCTCATA 60.249 55.000 9.66 0.00 0.00 2.15
196 197 1.522355 CTTGCATCCGACGGCTCAT 60.522 57.895 9.66 0.00 0.00 2.90
197 198 1.960040 ATCTTGCATCCGACGGCTCA 61.960 55.000 9.66 3.66 0.00 4.26
198 199 1.227380 ATCTTGCATCCGACGGCTC 60.227 57.895 9.66 0.76 0.00 4.70
199 200 1.522355 CATCTTGCATCCGACGGCT 60.522 57.895 9.66 0.00 0.00 5.52
200 201 1.089481 TTCATCTTGCATCCGACGGC 61.089 55.000 9.66 0.00 0.00 5.68
201 202 1.586422 ATTCATCTTGCATCCGACGG 58.414 50.000 7.84 7.84 0.00 4.79
202 203 2.156504 GCTATTCATCTTGCATCCGACG 59.843 50.000 0.00 0.00 0.00 5.12
203 204 3.397482 AGCTATTCATCTTGCATCCGAC 58.603 45.455 0.00 0.00 0.00 4.79
204 205 3.758755 AGCTATTCATCTTGCATCCGA 57.241 42.857 0.00 0.00 0.00 4.55
205 206 3.931468 CCTAGCTATTCATCTTGCATCCG 59.069 47.826 0.00 0.00 0.00 4.18
206 207 4.904241 ACCTAGCTATTCATCTTGCATCC 58.096 43.478 0.00 0.00 0.00 3.51
207 208 4.624882 CGACCTAGCTATTCATCTTGCATC 59.375 45.833 0.00 0.00 0.00 3.91
208 209 4.562347 CCGACCTAGCTATTCATCTTGCAT 60.562 45.833 0.00 0.00 0.00 3.96
209 210 3.243873 CCGACCTAGCTATTCATCTTGCA 60.244 47.826 0.00 0.00 0.00 4.08
210 211 3.321497 CCGACCTAGCTATTCATCTTGC 58.679 50.000 0.00 0.00 0.00 4.01
211 212 3.321497 GCCGACCTAGCTATTCATCTTG 58.679 50.000 0.00 0.00 0.00 3.02
212 213 2.300437 GGCCGACCTAGCTATTCATCTT 59.700 50.000 0.00 0.00 0.00 2.40
213 214 1.896465 GGCCGACCTAGCTATTCATCT 59.104 52.381 0.00 0.00 0.00 2.90
214 215 2.371910 GGCCGACCTAGCTATTCATC 57.628 55.000 0.00 0.00 0.00 2.92
226 227 1.077930 GGAGGGTAAAAGGCCGACC 60.078 63.158 9.87 9.87 0.00 4.79
227 228 0.392595 CAGGAGGGTAAAAGGCCGAC 60.393 60.000 0.00 0.00 0.00 4.79
228 229 1.988015 CAGGAGGGTAAAAGGCCGA 59.012 57.895 0.00 0.00 0.00 5.54
229 230 1.749258 GCAGGAGGGTAAAAGGCCG 60.749 63.158 0.00 0.00 0.00 6.13
230 231 1.379977 GGCAGGAGGGTAAAAGGCC 60.380 63.158 0.00 0.00 0.00 5.19
231 232 1.379977 GGGCAGGAGGGTAAAAGGC 60.380 63.158 0.00 0.00 0.00 4.35
232 233 0.256177 GAGGGCAGGAGGGTAAAAGG 59.744 60.000 0.00 0.00 0.00 3.11
233 234 1.290134 AGAGGGCAGGAGGGTAAAAG 58.710 55.000 0.00 0.00 0.00 2.27
234 235 1.755200 AAGAGGGCAGGAGGGTAAAA 58.245 50.000 0.00 0.00 0.00 1.52
235 236 1.755200 AAAGAGGGCAGGAGGGTAAA 58.245 50.000 0.00 0.00 0.00 2.01
236 237 1.633945 GAAAAGAGGGCAGGAGGGTAA 59.366 52.381 0.00 0.00 0.00 2.85
237 238 1.286248 GAAAAGAGGGCAGGAGGGTA 58.714 55.000 0.00 0.00 0.00 3.69
238 239 0.772124 TGAAAAGAGGGCAGGAGGGT 60.772 55.000 0.00 0.00 0.00 4.34
239 240 0.627986 ATGAAAAGAGGGCAGGAGGG 59.372 55.000 0.00 0.00 0.00 4.30
240 241 1.409381 GGATGAAAAGAGGGCAGGAGG 60.409 57.143 0.00 0.00 0.00 4.30
241 242 1.563410 AGGATGAAAAGAGGGCAGGAG 59.437 52.381 0.00 0.00 0.00 3.69
242 243 1.561542 GAGGATGAAAAGAGGGCAGGA 59.438 52.381 0.00 0.00 0.00 3.86
243 244 1.745141 CGAGGATGAAAAGAGGGCAGG 60.745 57.143 0.00 0.00 0.00 4.85
244 245 1.661341 CGAGGATGAAAAGAGGGCAG 58.339 55.000 0.00 0.00 0.00 4.85
245 246 0.392998 GCGAGGATGAAAAGAGGGCA 60.393 55.000 0.00 0.00 0.00 5.36
246 247 1.098129 GGCGAGGATGAAAAGAGGGC 61.098 60.000 0.00 0.00 0.00 5.19
247 248 0.811616 CGGCGAGGATGAAAAGAGGG 60.812 60.000 0.00 0.00 0.00 4.30
248 249 1.432270 GCGGCGAGGATGAAAAGAGG 61.432 60.000 12.98 0.00 0.00 3.69
249 250 0.740868 TGCGGCGAGGATGAAAAGAG 60.741 55.000 12.98 0.00 0.00 2.85
250 251 0.107703 ATGCGGCGAGGATGAAAAGA 60.108 50.000 12.98 0.00 0.00 2.52
251 252 0.734889 AATGCGGCGAGGATGAAAAG 59.265 50.000 12.98 0.00 0.00 2.27
252 253 0.451383 CAATGCGGCGAGGATGAAAA 59.549 50.000 12.98 0.00 0.00 2.29
253 254 0.676466 ACAATGCGGCGAGGATGAAA 60.676 50.000 12.98 0.00 0.00 2.69
254 255 1.078497 ACAATGCGGCGAGGATGAA 60.078 52.632 12.98 0.00 0.00 2.57
255 256 1.521457 GACAATGCGGCGAGGATGA 60.521 57.895 12.98 0.00 0.00 2.92
256 257 2.537560 GGACAATGCGGCGAGGATG 61.538 63.158 12.98 5.94 0.00 3.51
257 258 2.203070 GGACAATGCGGCGAGGAT 60.203 61.111 12.98 0.00 0.00 3.24
258 259 4.467084 GGGACAATGCGGCGAGGA 62.467 66.667 12.98 0.00 0.00 3.71
260 261 4.473520 AGGGGACAATGCGGCGAG 62.474 66.667 12.98 0.00 0.00 5.03
261 262 4.467084 GAGGGGACAATGCGGCGA 62.467 66.667 12.98 0.00 0.00 5.54
264 265 4.506255 GGGGAGGGGACAATGCGG 62.506 72.222 0.00 0.00 0.00 5.69
265 266 4.506255 GGGGGAGGGGACAATGCG 62.506 72.222 0.00 0.00 0.00 4.73
285 286 4.596585 GTGGGTGTGTGGGTGGGG 62.597 72.222 0.00 0.00 0.00 4.96
286 287 3.814906 TGTGGGTGTGTGGGTGGG 61.815 66.667 0.00 0.00 0.00 4.61
287 288 2.518349 GTGTGGGTGTGTGGGTGG 60.518 66.667 0.00 0.00 0.00 4.61
288 289 2.118404 GTGTGTGGGTGTGTGGGTG 61.118 63.158 0.00 0.00 0.00 4.61
289 290 2.274104 GTGTGTGGGTGTGTGGGT 59.726 61.111 0.00 0.00 0.00 4.51
290 291 2.118404 GTGTGTGTGGGTGTGTGGG 61.118 63.158 0.00 0.00 0.00 4.61
291 292 1.377856 TGTGTGTGTGGGTGTGTGG 60.378 57.895 0.00 0.00 0.00 4.17
292 293 0.957888 TGTGTGTGTGTGGGTGTGTG 60.958 55.000 0.00 0.00 0.00 3.82
293 294 0.958382 GTGTGTGTGTGTGGGTGTGT 60.958 55.000 0.00 0.00 0.00 3.72
294 295 0.957888 TGTGTGTGTGTGTGGGTGTG 60.958 55.000 0.00 0.00 0.00 3.82
295 296 0.958382 GTGTGTGTGTGTGTGGGTGT 60.958 55.000 0.00 0.00 0.00 4.16
296 297 0.957888 TGTGTGTGTGTGTGTGGGTG 60.958 55.000 0.00 0.00 0.00 4.61
297 298 0.958382 GTGTGTGTGTGTGTGTGGGT 60.958 55.000 0.00 0.00 0.00 4.51
298 299 1.653094 GGTGTGTGTGTGTGTGTGGG 61.653 60.000 0.00 0.00 0.00 4.61
299 300 1.800032 GGTGTGTGTGTGTGTGTGG 59.200 57.895 0.00 0.00 0.00 4.17
300 301 1.423450 CGGTGTGTGTGTGTGTGTG 59.577 57.895 0.00 0.00 0.00 3.82
301 302 2.395360 GCGGTGTGTGTGTGTGTGT 61.395 57.895 0.00 0.00 0.00 3.72
302 303 2.403186 GCGGTGTGTGTGTGTGTG 59.597 61.111 0.00 0.00 0.00 3.82
303 304 2.822255 GGCGGTGTGTGTGTGTGT 60.822 61.111 0.00 0.00 0.00 3.72
304 305 3.935872 CGGCGGTGTGTGTGTGTG 61.936 66.667 0.00 0.00 0.00 3.82
317 318 4.444024 CAATGACGGTGTGCGGCG 62.444 66.667 0.51 0.51 0.00 6.46
318 319 4.759096 GCAATGACGGTGTGCGGC 62.759 66.667 0.00 0.00 0.00 6.53
319 320 3.313007 CTGCAATGACGGTGTGCGG 62.313 63.158 0.00 3.35 41.27 5.69
320 321 2.174107 CTGCAATGACGGTGTGCG 59.826 61.111 0.00 0.00 41.27 5.34
321 322 1.207593 GTCTGCAATGACGGTGTGC 59.792 57.895 0.00 0.00 38.78 4.57
322 323 0.792640 GAGTCTGCAATGACGGTGTG 59.207 55.000 0.85 0.00 41.47 3.82
323 324 0.320771 GGAGTCTGCAATGACGGTGT 60.321 55.000 0.85 0.00 41.47 4.16
324 325 1.354337 CGGAGTCTGCAATGACGGTG 61.354 60.000 0.85 0.00 41.47 4.94
325 326 1.079819 CGGAGTCTGCAATGACGGT 60.080 57.895 0.85 0.00 41.47 4.83
326 327 2.456119 GCGGAGTCTGCAATGACGG 61.456 63.158 19.34 0.00 41.47 4.79
327 328 2.456119 GGCGGAGTCTGCAATGACG 61.456 63.158 24.97 1.52 41.47 4.35
328 329 2.109126 GGGCGGAGTCTGCAATGAC 61.109 63.158 24.97 7.40 37.23 3.06
329 330 2.268920 GGGCGGAGTCTGCAATGA 59.731 61.111 24.97 0.00 0.00 2.57
330 331 2.110967 CAGGGCGGAGTCTGCAATG 61.111 63.158 24.97 17.83 0.00 2.82
331 332 2.270205 CAGGGCGGAGTCTGCAAT 59.730 61.111 24.97 10.14 0.00 3.56
337 338 4.554036 GATGGGCAGGGCGGAGTC 62.554 72.222 0.00 0.00 0.00 3.36
341 342 4.883354 GAAGGATGGGCAGGGCGG 62.883 72.222 0.00 0.00 0.00 6.13
342 343 1.983119 TTAGAAGGATGGGCAGGGCG 61.983 60.000 0.00 0.00 0.00 6.13
343 344 0.258774 TTTAGAAGGATGGGCAGGGC 59.741 55.000 0.00 0.00 0.00 5.19
344 345 2.961062 CAATTTAGAAGGATGGGCAGGG 59.039 50.000 0.00 0.00 0.00 4.45
345 346 2.961062 CCAATTTAGAAGGATGGGCAGG 59.039 50.000 0.00 0.00 0.00 4.85
346 347 2.363359 GCCAATTTAGAAGGATGGGCAG 59.637 50.000 0.00 0.00 41.23 4.85
347 348 2.387757 GCCAATTTAGAAGGATGGGCA 58.612 47.619 0.00 0.00 41.23 5.36
348 349 1.338020 CGCCAATTTAGAAGGATGGGC 59.662 52.381 0.00 0.00 38.72 5.36
349 350 2.618709 GTCGCCAATTTAGAAGGATGGG 59.381 50.000 0.00 0.00 0.00 4.00
350 351 2.618709 GGTCGCCAATTTAGAAGGATGG 59.381 50.000 0.00 0.00 0.00 3.51
351 352 3.065371 GTGGTCGCCAATTTAGAAGGATG 59.935 47.826 0.00 0.00 34.18 3.51
352 353 3.279434 GTGGTCGCCAATTTAGAAGGAT 58.721 45.455 0.00 0.00 34.18 3.24
353 354 2.706890 GTGGTCGCCAATTTAGAAGGA 58.293 47.619 0.00 0.00 34.18 3.36
354 355 1.396996 CGTGGTCGCCAATTTAGAAGG 59.603 52.381 0.00 0.00 34.18 3.46
355 356 2.343101 TCGTGGTCGCCAATTTAGAAG 58.657 47.619 0.00 0.00 34.18 2.85
356 357 2.289195 ACTCGTGGTCGCCAATTTAGAA 60.289 45.455 0.00 0.00 34.18 2.10
357 358 1.274167 ACTCGTGGTCGCCAATTTAGA 59.726 47.619 0.00 0.00 34.18 2.10
358 359 1.722011 ACTCGTGGTCGCCAATTTAG 58.278 50.000 0.00 0.02 34.18 1.85
359 360 2.172851 AACTCGTGGTCGCCAATTTA 57.827 45.000 0.00 0.00 34.18 1.40
360 361 1.314730 AAACTCGTGGTCGCCAATTT 58.685 45.000 0.00 0.00 34.18 1.82
361 362 1.314730 AAAACTCGTGGTCGCCAATT 58.685 45.000 0.00 0.00 34.18 2.32
362 363 1.314730 AAAAACTCGTGGTCGCCAAT 58.685 45.000 0.00 0.00 34.18 3.16
363 364 2.783228 AAAAACTCGTGGTCGCCAA 58.217 47.368 0.00 0.00 34.18 4.52
364 365 4.544001 AAAAACTCGTGGTCGCCA 57.456 50.000 0.00 0.00 36.96 5.69
378 379 3.437642 CAGGCTCACTGGGGAAAAA 57.562 52.632 0.00 0.00 43.70 1.94
397 398 4.920112 TGTTGACGGGTGCGGGTG 62.920 66.667 0.00 0.00 0.00 4.61
398 399 3.485346 AATGTTGACGGGTGCGGGT 62.485 57.895 0.00 0.00 0.00 5.28
399 400 2.671619 AATGTTGACGGGTGCGGG 60.672 61.111 0.00 0.00 0.00 6.13
400 401 2.867472 GAATGTTGACGGGTGCGG 59.133 61.111 0.00 0.00 0.00 5.69
401 402 2.474266 CGAATGTTGACGGGTGCG 59.526 61.111 0.00 0.00 0.00 5.34
402 403 2.867472 CCGAATGTTGACGGGTGC 59.133 61.111 0.00 0.00 44.59 5.01
407 408 1.131826 GCGGAACCGAATGTTGACG 59.868 57.895 17.63 0.00 42.83 4.35
408 409 0.802494 ATGCGGAACCGAATGTTGAC 59.198 50.000 17.63 0.00 42.83 3.18
409 410 1.083489 GATGCGGAACCGAATGTTGA 58.917 50.000 17.63 0.00 37.90 3.18
410 411 0.098728 GGATGCGGAACCGAATGTTG 59.901 55.000 17.63 0.00 37.90 3.33
411 412 2.477880 GGATGCGGAACCGAATGTT 58.522 52.632 17.63 0.00 37.90 2.71
412 413 4.218722 GGATGCGGAACCGAATGT 57.781 55.556 17.63 0.00 37.90 2.71
419 420 4.814294 AGACGGCGGATGCGGAAC 62.814 66.667 13.24 0.00 43.58 3.62
420 421 4.508128 GAGACGGCGGATGCGGAA 62.508 66.667 13.24 0.00 43.58 4.30
425 426 4.498520 ACAGCGAGACGGCGGATG 62.499 66.667 13.24 4.52 38.18 3.51
426 427 4.194720 GACAGCGAGACGGCGGAT 62.195 66.667 13.24 0.00 38.18 4.18
432 433 2.951745 GCATCCGACAGCGAGACG 60.952 66.667 0.00 0.00 40.82 4.18
433 434 1.875813 CTGCATCCGACAGCGAGAC 60.876 63.158 0.00 0.00 40.82 3.36
434 435 1.387295 ATCTGCATCCGACAGCGAGA 61.387 55.000 0.00 0.00 40.82 4.04
435 436 0.938637 GATCTGCATCCGACAGCGAG 60.939 60.000 0.00 0.00 40.82 5.03
436 437 1.066422 GATCTGCATCCGACAGCGA 59.934 57.895 0.00 0.00 40.82 4.93
437 438 0.529337 AAGATCTGCATCCGACAGCG 60.529 55.000 0.00 0.00 35.04 5.18
438 439 0.935898 CAAGATCTGCATCCGACAGC 59.064 55.000 0.00 0.00 35.04 4.40
449 450 0.809241 GCTCGGACAGGCAAGATCTG 60.809 60.000 0.00 0.00 38.16 2.90
450 451 1.519719 GCTCGGACAGGCAAGATCT 59.480 57.895 0.00 0.00 0.00 2.75
451 452 4.116878 GCTCGGACAGGCAAGATC 57.883 61.111 0.00 0.00 0.00 2.75
458 459 4.785453 GGCAAGGGCTCGGACAGG 62.785 72.222 0.00 0.00 40.87 4.00
459 460 3.965539 CTGGCAAGGGCTCGGACAG 62.966 68.421 0.00 0.00 40.87 3.51
460 461 4.020617 CTGGCAAGGGCTCGGACA 62.021 66.667 0.00 0.00 40.87 4.02
461 462 4.021925 ACTGGCAAGGGCTCGGAC 62.022 66.667 0.00 0.00 40.87 4.79
462 463 4.020617 CACTGGCAAGGGCTCGGA 62.021 66.667 0.00 0.00 40.87 4.55
463 464 4.335647 ACACTGGCAAGGGCTCGG 62.336 66.667 0.00 0.00 40.87 4.63
464 465 2.743928 GACACTGGCAAGGGCTCG 60.744 66.667 0.00 0.00 40.87 5.03
465 466 2.360475 GGACACTGGCAAGGGCTC 60.360 66.667 0.00 0.00 40.87 4.70
466 467 2.856000 AGGACACTGGCAAGGGCT 60.856 61.111 0.00 0.00 40.87 5.19
467 468 2.360475 GAGGACACTGGCAAGGGC 60.360 66.667 0.00 0.00 40.13 5.19
468 469 2.046892 CGAGGACACTGGCAAGGG 60.047 66.667 0.00 0.00 0.00 3.95
469 470 2.046892 CCGAGGACACTGGCAAGG 60.047 66.667 0.00 0.00 0.00 3.61
470 471 2.046892 CCCGAGGACACTGGCAAG 60.047 66.667 0.00 0.00 0.00 4.01
471 472 4.329545 GCCCGAGGACACTGGCAA 62.330 66.667 0.00 0.00 43.46 4.52
474 475 3.775654 GAGGCCCGAGGACACTGG 61.776 72.222 0.00 0.00 29.21 4.00
475 476 4.135153 CGAGGCCCGAGGACACTG 62.135 72.222 0.00 0.00 41.76 3.66
479 480 4.083862 AAAGCGAGGCCCGAGGAC 62.084 66.667 16.53 0.24 41.76 3.85
480 481 4.082523 CAAAGCGAGGCCCGAGGA 62.083 66.667 16.53 0.00 41.76 3.71
482 483 4.767255 AGCAAAGCGAGGCCCGAG 62.767 66.667 16.53 1.60 41.76 4.63
483 484 4.329545 AAGCAAAGCGAGGCCCGA 62.330 61.111 16.53 0.00 41.76 5.14
484 485 4.107051 CAAGCAAAGCGAGGCCCG 62.107 66.667 0.00 3.77 42.21 6.13
485 486 2.982744 GACAAGCAAAGCGAGGCCC 61.983 63.158 0.00 0.00 0.00 5.80
486 487 2.563427 GACAAGCAAAGCGAGGCC 59.437 61.111 0.00 0.00 0.00 5.19
487 488 1.968540 AGGACAAGCAAAGCGAGGC 60.969 57.895 0.00 0.00 0.00 4.70
488 489 1.580845 CCAGGACAAGCAAAGCGAGG 61.581 60.000 0.00 0.00 0.00 4.63
489 490 1.871772 CCAGGACAAGCAAAGCGAG 59.128 57.895 0.00 0.00 0.00 5.03
490 491 2.260869 GCCAGGACAAGCAAAGCGA 61.261 57.895 0.00 0.00 0.00 4.93
491 492 2.256461 GCCAGGACAAGCAAAGCG 59.744 61.111 0.00 0.00 0.00 4.68
492 493 2.256461 CGCCAGGACAAGCAAAGC 59.744 61.111 0.00 0.00 0.00 3.51
493 494 2.256461 GCGCCAGGACAAGCAAAG 59.744 61.111 0.00 0.00 0.00 2.77
494 495 3.294493 GGCGCCAGGACAAGCAAA 61.294 61.111 24.80 0.00 0.00 3.68
512 513 4.479993 ATCGAGGCTGCAGGTGGC 62.480 66.667 17.12 2.33 45.13 5.01
513 514 2.513204 CATCGAGGCTGCAGGTGG 60.513 66.667 17.12 0.00 0.00 4.61
514 515 3.200593 GCATCGAGGCTGCAGGTG 61.201 66.667 16.00 0.00 39.46 4.00
515 516 3.382803 GAGCATCGAGGCTGCAGGT 62.383 63.158 31.40 3.62 45.99 4.00
516 517 2.588314 GAGCATCGAGGCTGCAGG 60.588 66.667 31.40 0.00 45.99 4.85
538 539 2.747855 GGGAGGAAGCAGCGGTTG 60.748 66.667 0.00 0.00 0.00 3.77
539 540 2.930562 AGGGAGGAAGCAGCGGTT 60.931 61.111 0.00 0.00 0.00 4.44
540 541 3.394836 GAGGGAGGAAGCAGCGGT 61.395 66.667 0.00 0.00 0.00 5.68
541 542 4.168291 GGAGGGAGGAAGCAGCGG 62.168 72.222 0.00 0.00 0.00 5.52
542 543 4.168291 GGGAGGGAGGAAGCAGCG 62.168 72.222 0.00 0.00 0.00 5.18
543 544 3.803162 GGGGAGGGAGGAAGCAGC 61.803 72.222 0.00 0.00 0.00 5.25
544 545 2.041928 AGGGGAGGGAGGAAGCAG 59.958 66.667 0.00 0.00 0.00 4.24
545 546 2.041265 GAGGGGAGGGAGGAAGCA 59.959 66.667 0.00 0.00 0.00 3.91
546 547 2.770475 GGAGGGGAGGGAGGAAGC 60.770 72.222 0.00 0.00 0.00 3.86
547 548 2.040359 GGGAGGGGAGGGAGGAAG 60.040 72.222 0.00 0.00 0.00 3.46
548 549 3.707189 GGGGAGGGGAGGGAGGAA 61.707 72.222 0.00 0.00 0.00 3.36
551 552 4.179599 GAGGGGGAGGGGAGGGAG 62.180 77.778 0.00 0.00 0.00 4.30
566 567 2.319410 TTTTTGGGGGTGTGGGGGAG 62.319 60.000 0.00 0.00 0.00 4.30
567 568 2.333462 TTTTTGGGGGTGTGGGGGA 61.333 57.895 0.00 0.00 0.00 4.81
568 569 2.287251 TTTTTGGGGGTGTGGGGG 59.713 61.111 0.00 0.00 0.00 5.40
583 584 9.748708 TTTCAAATCTCGATCAGTCAAATTTTT 57.251 25.926 0.00 0.00 0.00 1.94
584 585 9.918630 ATTTCAAATCTCGATCAGTCAAATTTT 57.081 25.926 0.00 0.00 0.00 1.82
585 586 9.918630 AATTTCAAATCTCGATCAGTCAAATTT 57.081 25.926 0.00 0.00 0.00 1.82
586 587 9.565213 GAATTTCAAATCTCGATCAGTCAAATT 57.435 29.630 0.00 0.00 0.00 1.82
587 588 8.733458 TGAATTTCAAATCTCGATCAGTCAAAT 58.267 29.630 0.00 0.00 0.00 2.32
588 589 8.098220 TGAATTTCAAATCTCGATCAGTCAAA 57.902 30.769 0.00 0.00 0.00 2.69
589 590 7.624974 GCTGAATTTCAAATCTCGATCAGTCAA 60.625 37.037 9.50 0.00 36.36 3.18
590 591 6.183360 GCTGAATTTCAAATCTCGATCAGTCA 60.183 38.462 9.50 0.00 36.36 3.41
591 592 6.190962 GCTGAATTTCAAATCTCGATCAGTC 58.809 40.000 9.50 1.33 36.36 3.51
592 593 5.065731 GGCTGAATTTCAAATCTCGATCAGT 59.934 40.000 9.50 0.00 36.36 3.41
593 594 5.508872 GGCTGAATTTCAAATCTCGATCAG 58.491 41.667 0.01 4.88 36.89 2.90
594 595 4.034394 CGGCTGAATTTCAAATCTCGATCA 59.966 41.667 0.01 0.00 0.00 2.92
595 596 4.271049 TCGGCTGAATTTCAAATCTCGATC 59.729 41.667 0.00 0.00 0.00 3.69
596 597 4.034510 GTCGGCTGAATTTCAAATCTCGAT 59.965 41.667 0.00 0.00 0.00 3.59
597 598 3.370978 GTCGGCTGAATTTCAAATCTCGA 59.629 43.478 0.00 3.55 0.00 4.04
598 599 3.372206 AGTCGGCTGAATTTCAAATCTCG 59.628 43.478 0.00 1.46 0.00 4.04
599 600 4.656041 CAGTCGGCTGAATTTCAAATCTC 58.344 43.478 12.86 0.00 45.28 2.75
600 601 4.691860 CAGTCGGCTGAATTTCAAATCT 57.308 40.909 12.86 0.00 45.28 2.40
612 613 3.108289 CTGCACGTCAGTCGGCTG 61.108 66.667 11.77 11.77 44.69 4.85
614 615 3.626680 TAGCTGCACGTCAGTCGGC 62.627 63.158 1.02 7.75 44.66 5.54
615 616 0.666274 TTTAGCTGCACGTCAGTCGG 60.666 55.000 1.02 0.00 44.66 4.79
616 617 0.435008 GTTTAGCTGCACGTCAGTCG 59.565 55.000 1.02 0.00 44.66 4.18
617 618 0.790814 GGTTTAGCTGCACGTCAGTC 59.209 55.000 1.02 8.28 44.66 3.51
618 619 0.944311 CGGTTTAGCTGCACGTCAGT 60.944 55.000 1.02 6.27 44.66 3.41
619 620 1.626654 CCGGTTTAGCTGCACGTCAG 61.627 60.000 1.02 9.73 45.62 3.51
620 621 1.666553 CCGGTTTAGCTGCACGTCA 60.667 57.895 1.02 0.00 0.00 4.35
621 622 1.373748 TCCGGTTTAGCTGCACGTC 60.374 57.895 0.00 0.00 0.00 4.34
622 623 1.666872 GTCCGGTTTAGCTGCACGT 60.667 57.895 0.00 0.00 0.00 4.49
623 624 0.108992 TAGTCCGGTTTAGCTGCACG 60.109 55.000 0.00 0.00 0.00 5.34
624 625 2.088950 TTAGTCCGGTTTAGCTGCAC 57.911 50.000 0.00 0.00 0.00 4.57
625 626 2.843401 TTTAGTCCGGTTTAGCTGCA 57.157 45.000 0.00 0.00 0.00 4.41
626 627 4.632688 TGTATTTTAGTCCGGTTTAGCTGC 59.367 41.667 0.00 0.00 0.00 5.25
627 628 6.920569 ATGTATTTTAGTCCGGTTTAGCTG 57.079 37.500 0.00 0.00 0.00 4.24
628 629 8.886719 GTTTATGTATTTTAGTCCGGTTTAGCT 58.113 33.333 0.00 0.00 0.00 3.32
629 630 8.667463 TGTTTATGTATTTTAGTCCGGTTTAGC 58.333 33.333 0.00 0.00 0.00 3.09
631 632 9.941325 TCTGTTTATGTATTTTAGTCCGGTTTA 57.059 29.630 0.00 0.00 0.00 2.01
632 633 8.851541 TCTGTTTATGTATTTTAGTCCGGTTT 57.148 30.769 0.00 0.00 0.00 3.27
633 634 8.851541 TTCTGTTTATGTATTTTAGTCCGGTT 57.148 30.769 0.00 0.00 0.00 4.44
634 635 8.724229 GTTTCTGTTTATGTATTTTAGTCCGGT 58.276 33.333 0.00 0.00 0.00 5.28
635 636 8.179615 GGTTTCTGTTTATGTATTTTAGTCCGG 58.820 37.037 0.00 0.00 0.00 5.14
636 637 8.723311 TGGTTTCTGTTTATGTATTTTAGTCCG 58.277 33.333 0.00 0.00 0.00 4.79
637 638 9.836076 GTGGTTTCTGTTTATGTATTTTAGTCC 57.164 33.333 0.00 0.00 0.00 3.85
650 651 4.099266 AGCAAATGCAGTGGTTTCTGTTTA 59.901 37.500 8.28 0.00 45.16 2.01
660 661 2.730090 CGAAGCTTAGCAAATGCAGTGG 60.730 50.000 7.07 0.00 45.16 4.00
675 676 6.201044 GTGCATATATTGTCAGTAACGAAGCT 59.799 38.462 0.00 0.00 0.00 3.74
676 677 6.355638 GTGCATATATTGTCAGTAACGAAGC 58.644 40.000 0.00 0.00 0.00 3.86
677 678 6.478673 TGGTGCATATATTGTCAGTAACGAAG 59.521 38.462 0.00 0.00 0.00 3.79
681 682 7.148154 TGGTTTGGTGCATATATTGTCAGTAAC 60.148 37.037 0.00 0.00 0.00 2.50
684 685 5.260424 TGGTTTGGTGCATATATTGTCAGT 58.740 37.500 0.00 0.00 0.00 3.41
686 687 6.393990 GTTTGGTTTGGTGCATATATTGTCA 58.606 36.000 0.00 0.00 0.00 3.58
698 699 2.032924 GTCTCTTCGGTTTGGTTTGGTG 59.967 50.000 0.00 0.00 0.00 4.17
700 701 2.294074 TGTCTCTTCGGTTTGGTTTGG 58.706 47.619 0.00 0.00 0.00 3.28
701 702 4.102649 GTTTGTCTCTTCGGTTTGGTTTG 58.897 43.478 0.00 0.00 0.00 2.93
702 703 3.759618 TGTTTGTCTCTTCGGTTTGGTTT 59.240 39.130 0.00 0.00 0.00 3.27
731 733 3.774734 TGTTACTCTACTCTGCCTTGGA 58.225 45.455 0.00 0.00 0.00 3.53
755 757 6.759272 AGTTATGATCGTGGCTTATGTATGT 58.241 36.000 0.00 0.00 0.00 2.29
756 758 6.311445 GGAGTTATGATCGTGGCTTATGTATG 59.689 42.308 0.00 0.00 0.00 2.39
757 759 6.014584 TGGAGTTATGATCGTGGCTTATGTAT 60.015 38.462 0.00 0.00 0.00 2.29
759 761 4.100963 TGGAGTTATGATCGTGGCTTATGT 59.899 41.667 0.00 0.00 0.00 2.29
760 762 4.449068 GTGGAGTTATGATCGTGGCTTATG 59.551 45.833 0.00 0.00 0.00 1.90
761 763 4.345257 AGTGGAGTTATGATCGTGGCTTAT 59.655 41.667 0.00 0.00 0.00 1.73
762 764 3.704566 AGTGGAGTTATGATCGTGGCTTA 59.295 43.478 0.00 0.00 0.00 3.09
763 765 2.501723 AGTGGAGTTATGATCGTGGCTT 59.498 45.455 0.00 0.00 0.00 4.35
764 766 2.111384 AGTGGAGTTATGATCGTGGCT 58.889 47.619 0.00 0.00 0.00 4.75
772 774 3.322541 TCGTGGTCAAAGTGGAGTTATGA 59.677 43.478 0.00 0.00 0.00 2.15
777 779 2.104111 TCAATCGTGGTCAAAGTGGAGT 59.896 45.455 0.00 0.00 0.00 3.85
848 850 2.390225 TTCAGATAGGAGGAGGAGGC 57.610 55.000 0.00 0.00 0.00 4.70
849 851 5.903198 AATTTTCAGATAGGAGGAGGAGG 57.097 43.478 0.00 0.00 0.00 4.30
885 889 2.986728 GGGAGGATTTATAGGGGCTTCA 59.013 50.000 0.00 0.00 0.00 3.02
1125 1140 2.633509 GCTGGTGCTGCCCTTCTTG 61.634 63.158 0.00 0.00 36.04 3.02
1465 1480 0.457035 CTGTTGCTGTTGCTTGTGGT 59.543 50.000 0.00 0.00 40.48 4.16
1476 1503 3.189080 TGCTATTACTGTTGCTGTTGCTG 59.811 43.478 0.00 0.00 40.48 4.41
1602 1635 1.021390 CAGCAAAGTCCGGCCTGTAG 61.021 60.000 0.00 0.00 0.00 2.74
1638 1671 1.001503 CCAGGACTCCAGCTCCTCT 59.998 63.158 0.00 0.00 35.83 3.69
1653 1686 0.168348 ACGACGACTCGAACATCCAG 59.832 55.000 5.20 0.00 43.06 3.86
1887 1920 3.206211 GAGCGGCGAGAGATCCCAG 62.206 68.421 12.98 0.00 0.00 4.45
2150 2183 8.853077 AAACTACATCATGAAATTCAGAGTGA 57.147 30.769 0.00 1.00 0.00 3.41
2164 2197 6.516739 TCTCGAGAACTGAAACTACATCAT 57.483 37.500 14.01 0.00 0.00 2.45
2210 2264 6.046593 TGAAATTACTAGTAGAACATGCCGG 58.953 40.000 3.59 0.00 0.00 6.13
2229 2293 3.770933 CTGATGGACAACCCCATTGAAAT 59.229 43.478 0.00 0.00 46.34 2.17
2257 2321 0.388659 GGTTTCCTGCATGCAACACA 59.611 50.000 22.88 3.41 0.00 3.72
2297 2361 2.223548 GCATTCGTAATCCATTGCAGCA 60.224 45.455 0.00 0.00 0.00 4.41
2310 2375 1.529226 CAACAACCCCAGCATTCGTA 58.471 50.000 0.00 0.00 0.00 3.43
2312 2377 1.178534 ACCAACAACCCCAGCATTCG 61.179 55.000 0.00 0.00 0.00 3.34
2317 2382 0.887933 CATACACCAACAACCCCAGC 59.112 55.000 0.00 0.00 0.00 4.85
2320 2385 3.080300 TGATCATACACCAACAACCCC 57.920 47.619 0.00 0.00 0.00 4.95
2322 2387 6.266168 TCATTTGATCATACACCAACAACC 57.734 37.500 0.00 0.00 0.00 3.77
2366 2431 5.536161 GGAATAGCAAATGCAGGAAGGAATA 59.464 40.000 8.28 0.00 45.16 1.75
2370 2436 3.294214 AGGAATAGCAAATGCAGGAAGG 58.706 45.455 8.28 0.00 45.16 3.46
2390 2456 9.897744 TCTAAATTACAATTTGAAGCAACTGAG 57.102 29.630 2.79 0.00 38.90 3.35
2462 2528 1.005394 CCTTACTTGGTGTCGCCGT 60.005 57.895 0.00 0.00 41.21 5.68
2467 2533 2.410939 GGTCGTTCCTTACTTGGTGTC 58.589 52.381 0.00 0.00 0.00 3.67
2468 2534 1.071228 GGGTCGTTCCTTACTTGGTGT 59.929 52.381 0.30 0.00 36.25 4.16
2469 2535 1.609841 GGGGTCGTTCCTTACTTGGTG 60.610 57.143 0.30 0.00 36.25 4.17
2470 2536 0.689055 GGGGTCGTTCCTTACTTGGT 59.311 55.000 0.30 0.00 36.25 3.67
2471 2537 0.390735 CGGGGTCGTTCCTTACTTGG 60.391 60.000 0.30 0.00 36.25 3.61
2472 2538 1.017701 GCGGGGTCGTTCCTTACTTG 61.018 60.000 0.00 0.00 38.89 3.16
2473 2539 1.294459 GCGGGGTCGTTCCTTACTT 59.706 57.895 0.00 0.00 38.89 2.24
2474 2540 2.976356 GCGGGGTCGTTCCTTACT 59.024 61.111 0.00 0.00 38.89 2.24
2475 2541 2.507769 CGCGGGGTCGTTCCTTAC 60.508 66.667 0.00 0.00 38.89 2.34
2476 2542 3.762247 CCGCGGGGTCGTTCCTTA 61.762 66.667 20.10 0.00 38.89 2.69
2508 2574 3.893089 TCAACCTCTGACTCCCCTT 57.107 52.632 0.00 0.00 0.00 3.95
2546 2612 0.708802 TCTAAACTCCGACCCTCCCT 59.291 55.000 0.00 0.00 0.00 4.20
2558 2624 3.198853 GCCTTCAGTCATCCCTCTAAACT 59.801 47.826 0.00 0.00 0.00 2.66
2568 2634 1.372087 CCTTGCCGCCTTCAGTCATC 61.372 60.000 0.00 0.00 0.00 2.92
2624 2690 3.095912 TGTCGGTAGATTCTTCCTCCA 57.904 47.619 7.63 1.82 0.00 3.86
2659 2725 5.171476 CGATGACCTAATTGTGAGTTGTCT 58.829 41.667 0.00 0.00 0.00 3.41
2680 2746 1.764571 CTGATATTTCCCCGGGGCGA 61.765 60.000 36.68 25.34 34.68 5.54
2682 2748 1.074951 CCTGATATTTCCCCGGGGC 59.925 63.158 36.68 20.35 34.68 5.80
2686 2752 1.543429 GGAGCACCTGATATTTCCCCG 60.543 57.143 0.00 0.00 0.00 5.73
2687 2753 1.202940 GGGAGCACCTGATATTTCCCC 60.203 57.143 0.00 0.00 38.65 4.81
2794 2861 7.663043 TTTTTAGGGGTTGTAGTCACATTTT 57.337 32.000 0.00 0.00 33.76 1.82
2795 2862 7.849322 ATTTTTAGGGGTTGTAGTCACATTT 57.151 32.000 0.00 0.00 33.76 2.32
2810 2877 5.512404 GGTTTTGGACCTGGAATTTTTAGGG 60.512 44.000 0.00 0.00 45.55 3.53
2833 2900 6.814506 TTTATTTTCCAATGTGCATTTGGG 57.185 33.333 23.56 10.35 0.00 4.12
2860 2927 8.628630 TGACACTATTCACATTTGGATTTGTA 57.371 30.769 0.00 0.00 0.00 2.41
2861 2928 7.523293 TGACACTATTCACATTTGGATTTGT 57.477 32.000 0.00 0.00 0.00 2.83
2862 2929 8.865978 CATTGACACTATTCACATTTGGATTTG 58.134 33.333 0.00 0.00 0.00 2.32
2864 2931 8.125978 ACATTGACACTATTCACATTTGGATT 57.874 30.769 0.00 0.00 0.00 3.01
2866 2933 7.369607 CAACATTGACACTATTCACATTTGGA 58.630 34.615 0.00 0.00 0.00 3.53
2867 2934 6.089820 GCAACATTGACACTATTCACATTTGG 59.910 38.462 0.00 0.00 0.00 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.