AutoCloner

Multiple sequence alignment - TraesCS2A01G183200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2A01G183200	chr2A	100.000	6565	0	0	997	7561	143209178	143215742	0.000000e+00	12124.0
1	TraesCS2A01G183200	chr2A	100.000	790	0	0	1	790	143208182	143208971	0.000000e+00	1459.0
2	TraesCS2A01G183200	chr2A	86.139	303	40	2	110	411	752819474	752819775	7.320000e-85	326.0
3	TraesCS2A01G183200	chr2B	94.001	5568	260	49	2026	7561	192360926	192366451	0.000000e+00	8364.0
4	TraesCS2A01G183200	chr2B	93.238	976	34	9	997	1966	192359978	192360927	0.000000e+00	1408.0
5	TraesCS2A01G183200	chr2B	97.133	279	4	3	514	790	192359628	192359904	1.150000e-127	468.0
6	TraesCS2A01G183200	chr2D	96.896	2577	66	9	3834	6403	135285194	135287763	0.000000e+00	4303.0
7	TraesCS2A01G183200	chr2D	95.397	1803	75	7	2026	3825	135283019	135284816	0.000000e+00	2863.0
8	TraesCS2A01G183200	chr2D	94.359	975	40	5	997	1966	135282056	135283020	0.000000e+00	1482.0
9	TraesCS2A01G183200	chr2D	94.876	605	26	4	6961	7561	135307550	135308153	0.000000e+00	941.0
10	TraesCS2A01G183200	chr2D	95.037	544	23	3	6396	6938	135306845	135307385	0.000000e+00	852.0
11	TraesCS2A01G183200	chr2D	95.440	307	3	4	493	790	135281678	135281982	5.310000e-131	479.0
12	TraesCS2A01G183200	chr2D	100.000	96	0	0	3834	3929	135284984	135285079	2.170000e-40	178.0
13	TraesCS2A01G183200	chr2D	91.026	78	5	2	1954	2029	11147556	11147479	3.730000e-18	104.0
14	TraesCS2A01G183200	chrUn	100.000	390	0	0	3834	4223	480096673	480096284	0.000000e+00	721.0
15	TraesCS2A01G183200	chr7D	84.112	428	54	4	1	414	112180522	112180949	1.180000e-107	401.0
16	TraesCS2A01G183200	chr7D	72.026	311	63	20	1	304	74965890	74965597	3.790000e-08	71.3
17	TraesCS2A01G183200	chr7A	84.161	423	54	7	1	410	117278092	117278514	1.530000e-106	398.0
18	TraesCS2A01G183200	chr7A	81.455	426	59	11	1	411	725558686	725558266	1.570000e-86	331.0
19	TraesCS2A01G183200	chr7A	94.118	68	4	0	1962	2029	287548645	287548712	3.730000e-18	104.0
20	TraesCS2A01G183200	chr5A	83.879	428	55	7	1	414	493407650	493407223	5.500000e-106	396.0
21	TraesCS2A01G183200	chr3B	82.517	429	57	8	1	414	748774296	748774721	2.010000e-95	361.0
22	TraesCS2A01G183200	chr6D	82.407	432	53	18	1	414	354537243	354537669	9.330000e-94	355.0
23	TraesCS2A01G183200	chr6D	81.628	430	51	11	1	414	371594541	371594958	1.570000e-86	331.0
24	TraesCS2A01G183200	chr6D	92.958	71	5	0	1961	2031	46060753	46060823	3.730000e-18	104.0
25	TraesCS2A01G183200	chr1A	79.439	428	70	12	1	412	91597688	91598113	3.450000e-73	287.0
26	TraesCS2A01G183200	chr6A	83.521	267	32	7	78	339	424794301	424794042	9.810000e-59	239.0
27	TraesCS2A01G183200	chr6B	81.383	188	26	7	9	194	719232869	719232689	2.200000e-30	145.0
28	TraesCS2A01G183200	chr3D	98.485	66	1	0	1963	2028	488867398	488867463	4.790000e-22	117.0
29	TraesCS2A01G183200	chr3D	84.091	88	14	0	1	88	575775414	575775327	1.350000e-12	86.1
30	TraesCS2A01G183200	chr1D	95.522	67	2	1	1963	2029	198898766	198898831	1.040000e-18	106.0
31	TraesCS2A01G183200	chr1B	93.151	73	4	1	1958	2029	278463934	278463862	1.040000e-18	106.0
32	TraesCS2A01G183200	chr1B	92.754	69	5	0	1961	2029	264349058	264349126	4.830000e-17	100.0
33	TraesCS2A01G183200	chr4D	91.026	78	5	2	1963	2040	344946859	344946784	3.730000e-18	104.0
34	TraesCS2A01G183200	chr3A	93.056	72	1	2	1961	2029	313505971	313505901	1.340000e-17	102.0
35	TraesCS2A01G183200	chr4A	80.392	102	15	4	1	101	1072874	1072777	1.050000e-08	73.1

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2A01G183200	chr2A	143208182	143215742	7560	False	6791.500000	12124	100.000000	1	7561	2	chr2A.!!$F2	7560
1	TraesCS2A01G183200	chr2B	192359628	192366451	6823	False	3413.333333	8364	94.790667	514	7561	3	chr2B.!!$F1	7047
2	TraesCS2A01G183200	chr2D	135281678	135287763	6085	False	1861.000000	4303	96.418400	493	6403	5	chr2D.!!$F1	5910
3	TraesCS2A01G183200	chr2D	135306845	135308153	1308	False	896.500000	941	94.956500	6396	7561	2	chr2D.!!$F2	1165

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
222	223	0.109597	CCCGCTGTTTGATGTGCTTC	60.110	55.0	0.00	0.00	3.86	F
285	286	0.165944	GTTTGATCGCCGAAGTGTGG	59.834	55.0	0.00	0.00	4.17	F
1981	2005	0.033601	TTGTTGGACCTTGTGGCTGT	60.034	50.0	0.00	36.63	4.40	F
1990	2014	0.102844	CTTGTGGCTGTGGTGGTTTG	59.897	55.0	0.00	0.00	2.93	F
2064	2088	0.107214	GGTTCATTGATCCGAGGGCA	60.107	55.0	0.00	0.00	5.36	F
2616	2661	0.806868	CGAGTGGCAGCAACATCATT	59.193	50.0	1.78	0.00	2.57	F
2868	2914	2.158957	GGGAATCATGGTCTGCTTACGA	60.159	50.0	0.00	0.00	3.43	F
4540	4960	0.606673	GAAGGCAAGTCCTGTCACCC	60.607	60.0	0.00	46.94	4.61	F
5934	6365	0.394565	ATCCAAGTAGAGCCGCATCC	59.605	55.0	0.00	0.00	3.51	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
1971	1995	0.102844	CAAACCACCACAGCCACAAG	59.897	55.000	0.00	0.00	3.16	R
2064	2088	0.116143	CTCCTCCTGGCCTAGGCTAT	59.884	60.000	32.18	46.87	2.97	R
3580	3629	1.079266	GTGCTGCTCAGAGGACCAG	60.079	63.158	0.00	31.19	4.00	R
3827	3876	8.557864	CGAAATAAGAAGAGAATTGCTCATGAT	58.442	33.333	0.00	46.45	2.45	R
4223	4643	3.583086	ACTAGCACCAATACTCCAGTTGT	59.417	43.478	0.00	0.00	3.32	R
4369	4789	5.897377	AAACACTTAGCACTTTCAACAGT	57.103	34.783	0.00	0.00	3.55	R
4707	5135	7.329226	ACAGTTGTTTGCTCAATATTTACATGC	59.671	33.333	0.00	0.00	4.06	R
6141	6572	0.673985	CTATCCTTGACGGGATGCGA	59.326	55.000	6.30	44.85	5.10	R
6749	7184	0.042448	GTCGGACACGTTTGACTTGC	60.042	55.000	2.62	41.85	4.01	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
17	18	2.654877	AGGCGTGGTACTTGACGG	59.345	61.111	12.37	0.00	36.09	4.79
18	19	1.904865	AGGCGTGGTACTTGACGGA	60.905	57.895	12.37	0.00	36.09	4.69
19	20	1.445582	GGCGTGGTACTTGACGGAG	60.446	63.158	12.37	0.00	36.09	4.63
20	21	2.092882	GCGTGGTACTTGACGGAGC	61.093	63.158	12.37	0.00	36.09	4.70
21	22	1.800315	CGTGGTACTTGACGGAGCG	60.800	63.158	0.00	0.00	31.84	5.03
22	23	2.092882	GTGGTACTTGACGGAGCGC	61.093	63.158	0.00	0.00	0.00	5.92
23	24	2.879462	GGTACTTGACGGAGCGCG	60.879	66.667	0.00	0.00	0.00	6.86
24	25	2.879462	GTACTTGACGGAGCGCGG	60.879	66.667	8.83	0.00	0.00	6.46
25	26	4.789075	TACTTGACGGAGCGCGGC	62.789	66.667	8.83	0.00	0.00	6.53
33	34	4.537433	GGAGCGCGGCCTCATCTT	62.537	66.667	8.83	0.00	33.47	2.40
34	35	2.417516	GAGCGCGGCCTCATCTTA	59.582	61.111	8.83	0.00	0.00	2.10
35	36	1.227263	GAGCGCGGCCTCATCTTAA	60.227	57.895	8.83	0.00	0.00	1.85
36	37	0.810031	GAGCGCGGCCTCATCTTAAA	60.810	55.000	8.83	0.00	0.00	1.52
37	38	1.090052	AGCGCGGCCTCATCTTAAAC	61.090	55.000	8.83	0.00	0.00	2.01
38	39	2.014594	CGCGGCCTCATCTTAAACC	58.985	57.895	0.00	0.00	0.00	3.27
39	40	0.742990	CGCGGCCTCATCTTAAACCA	60.743	55.000	0.00	0.00	0.00	3.67
40	41	1.017387	GCGGCCTCATCTTAAACCAG	58.983	55.000	0.00	0.00	0.00	4.00
41	42	1.406887	GCGGCCTCATCTTAAACCAGA	60.407	52.381	0.00	0.00	0.00	3.86
42	43	2.746472	GCGGCCTCATCTTAAACCAGAT	60.746	50.000	0.00	0.00	33.44	2.90
44	45	2.620585	GGCCTCATCTTAAACCAGATGC	59.379	50.000	0.00	0.00	46.88	3.91
45	46	2.620585	GCCTCATCTTAAACCAGATGCC	59.379	50.000	5.91	0.00	46.88	4.40
46	47	3.217626	CCTCATCTTAAACCAGATGCCC	58.782	50.000	5.91	0.00	46.88	5.36
47	48	2.874701	CTCATCTTAAACCAGATGCCCG	59.125	50.000	5.91	0.00	46.88	6.13
48	49	1.949525	CATCTTAAACCAGATGCCCGG	59.050	52.381	0.00	0.00	42.89	5.73
49	50	0.254747	TCTTAAACCAGATGCCCGGG	59.745	55.000	19.09	19.09	36.11	5.73
50	51	1.379309	TTAAACCAGATGCCCGGGC	60.379	57.895	39.40	39.40	42.35	6.13
51	52	2.847366	TTAAACCAGATGCCCGGGCC	62.847	60.000	41.75	27.67	41.09	5.80
71	72	3.151710	CATCGACCACCGCCCCTA	61.152	66.667	0.00	0.00	38.37	3.53
72	73	3.152400	ATCGACCACCGCCCCTAC	61.152	66.667	0.00	0.00	38.37	3.18
78	79	4.814294	CACCGCCCCTACGCTCAC	62.814	72.222	0.00	0.00	0.00	3.51
84	85	4.849329	CCCTACGCTCACGCCGAC	62.849	72.222	0.00	0.00	45.53	4.79
103	104	4.735132	CCGAGCCCGAGCGACAAA	62.735	66.667	0.00	0.00	46.67	2.83
104	105	3.181967	CGAGCCCGAGCGACAAAG	61.182	66.667	0.00	0.00	46.67	2.77
105	106	3.491652	GAGCCCGAGCGACAAAGC	61.492	66.667	0.00	0.00	46.67	3.51
109	110	3.777925	CCGAGCGACAAAGCGGTG	61.778	66.667	0.00	0.00	42.62	4.94
110	111	4.430423	CGAGCGACAAAGCGGTGC	62.430	66.667	0.00	0.00	42.62	5.01
111	112	4.090057	GAGCGACAAAGCGGTGCC	62.090	66.667	0.00	0.00	42.62	5.01
114	115	4.072088	CGACAAAGCGGTGCCGAC	62.072	66.667	15.45	5.91	42.83	4.79
115	116	4.072088	GACAAAGCGGTGCCGACG	62.072	66.667	15.45	1.49	42.83	5.12
134	135	4.680237	CGACCAACAGCCCGAGCA	62.680	66.667	0.00	0.00	43.56	4.26
135	136	3.050275	GACCAACAGCCCGAGCAC	61.050	66.667	0.00	0.00	43.56	4.40
136	137	3.825160	GACCAACAGCCCGAGCACA	62.825	63.158	0.00	0.00	43.56	4.57
137	138	3.052082	CCAACAGCCCGAGCACAG	61.052	66.667	0.00	0.00	43.56	3.66
138	139	2.031012	CAACAGCCCGAGCACAGA	59.969	61.111	0.00	0.00	43.56	3.41
139	140	1.597854	CAACAGCCCGAGCACAGAA	60.598	57.895	0.00	0.00	43.56	3.02
140	141	1.302033	AACAGCCCGAGCACAGAAG	60.302	57.895	0.00	0.00	43.56	2.85
141	142	3.123620	CAGCCCGAGCACAGAAGC	61.124	66.667	0.00	0.00	43.56	3.86
142	143	4.400961	AGCCCGAGCACAGAAGCC	62.401	66.667	0.00	0.00	43.56	4.35
143	144	4.704833	GCCCGAGCACAGAAGCCA	62.705	66.667	0.00	0.00	39.53	4.75
144	145	2.743928	CCCGAGCACAGAAGCCAC	60.744	66.667	0.00	0.00	34.23	5.01
145	146	3.114616	CCGAGCACAGAAGCCACG	61.115	66.667	0.00	0.00	35.62	4.94
146	147	2.356313	CGAGCACAGAAGCCACGT	60.356	61.111	0.00	0.00	34.23	4.49
147	148	2.375766	CGAGCACAGAAGCCACGTC	61.376	63.158	0.00	0.00	34.23	4.34
148	149	2.356313	AGCACAGAAGCCACGTCG	60.356	61.111	0.00	0.00	34.23	5.12
149	150	2.355837	GCACAGAAGCCACGTCGA	60.356	61.111	0.00	0.00	0.00	4.20
150	151	2.658707	GCACAGAAGCCACGTCGAC	61.659	63.158	5.18	5.18	0.00	4.20
151	152	1.299850	CACAGAAGCCACGTCGACA	60.300	57.895	17.16	0.00	0.00	4.35
152	153	1.299926	ACAGAAGCCACGTCGACAC	60.300	57.895	17.16	1.42	0.00	3.67
153	154	2.022129	CAGAAGCCACGTCGACACC	61.022	63.158	17.16	0.00	0.00	4.16
154	155	3.103911	GAAGCCACGTCGACACCG	61.104	66.667	17.16	4.16	37.07	4.94
155	156	3.547249	GAAGCCACGTCGACACCGA	62.547	63.158	17.16	0.00	43.35	4.69
156	157	3.553437	AAGCCACGTCGACACCGAG	62.553	63.158	17.16	0.66	46.52	4.63
158	159	4.337060	CCACGTCGACACCGAGCA	62.337	66.667	17.16	0.00	46.52	4.26
159	160	3.097728	CACGTCGACACCGAGCAC	61.098	66.667	17.16	0.00	46.52	4.40
160	161	4.678269	ACGTCGACACCGAGCACG	62.678	66.667	17.16	0.74	46.52	5.34
161	162	4.678269	CGTCGACACCGAGCACGT	62.678	66.667	17.16	0.00	46.52	4.49
162	163	2.799916	GTCGACACCGAGCACGTC	60.800	66.667	11.55	0.00	46.52	4.34
163	164	2.976350	TCGACACCGAGCACGTCT	60.976	61.111	2.18	0.00	40.30	4.18
164	165	2.801162	CGACACCGAGCACGTCTG	60.801	66.667	2.18	0.00	38.22	3.51
165	166	3.106407	GACACCGAGCACGTCTGC	61.106	66.667	2.18	0.00	44.63	4.26
176	177	2.178273	CGTCTGCGTCCATGTCGA	59.822	61.111	10.87	0.00	0.00	4.20
177	178	2.152699	CGTCTGCGTCCATGTCGAC	61.153	63.158	9.11	9.11	0.00	4.20
178	179	1.805945	GTCTGCGTCCATGTCGACC	60.806	63.158	14.12	0.00	0.00	4.79
179	180	2.509336	CTGCGTCCATGTCGACCC	60.509	66.667	14.12	0.00	0.00	4.46
180	181	4.077184	TGCGTCCATGTCGACCCC	62.077	66.667	14.12	0.00	0.00	4.95
182	183	4.508128	CGTCCATGTCGACCCCGG	62.508	72.222	14.12	10.76	36.24	5.73
183	184	4.832608	GTCCATGTCGACCCCGGC	62.833	72.222	14.12	0.00	41.51	6.13
186	187	4.838152	CATGTCGACCCCGGCCAG	62.838	72.222	14.12	0.00	40.18	4.85
199	200	4.767255	GCCAGTCCCACGCCAGAG	62.767	72.222	0.00	0.00	0.00	3.35
200	201	4.087892	CCAGTCCCACGCCAGAGG	62.088	72.222	0.00	0.00	0.00	3.69
201	202	2.997315	CAGTCCCACGCCAGAGGA	60.997	66.667	0.00	0.00	0.00	3.71
202	203	2.681778	AGTCCCACGCCAGAGGAG	60.682	66.667	0.00	0.00	0.00	3.69
203	204	4.459089	GTCCCACGCCAGAGGAGC	62.459	72.222	0.00	0.00	0.00	4.70
212	213	2.348998	CAGAGGAGCCCGCTGTTT	59.651	61.111	14.11	0.00	44.47	2.83
213	214	2.037136	CAGAGGAGCCCGCTGTTTG	61.037	63.158	14.11	0.00	44.47	2.93
214	215	2.217038	AGAGGAGCCCGCTGTTTGA	61.217	57.895	0.00	0.00	31.11	2.69
215	216	1.078143	GAGGAGCCCGCTGTTTGAT	60.078	57.895	0.00	0.00	0.00	2.57
216	217	1.372087	GAGGAGCCCGCTGTTTGATG	61.372	60.000	0.00	0.00	0.00	3.07
217	218	1.675641	GGAGCCCGCTGTTTGATGT	60.676	57.895	0.00	0.00	0.00	3.06
218	219	1.503542	GAGCCCGCTGTTTGATGTG	59.496	57.895	0.00	0.00	0.00	3.21
219	220	2.126346	GCCCGCTGTTTGATGTGC	60.126	61.111	0.00	0.00	0.00	4.57
220	221	2.629656	GCCCGCTGTTTGATGTGCT	61.630	57.895	0.00	0.00	0.00	4.40
221	222	1.959085	CCCGCTGTTTGATGTGCTT	59.041	52.632	0.00	0.00	0.00	3.91
222	223	0.109597	CCCGCTGTTTGATGTGCTTC	60.110	55.000	0.00	0.00	0.00	3.86
223	224	0.453282	CCGCTGTTTGATGTGCTTCG	60.453	55.000	0.00	0.00	0.00	3.79
224	225	0.235665	CGCTGTTTGATGTGCTTCGT	59.764	50.000	0.00	0.00	0.00	3.85
225	226	1.678360	GCTGTTTGATGTGCTTCGTG	58.322	50.000	0.00	0.00	0.00	4.35
226	227	1.002468	GCTGTTTGATGTGCTTCGTGT	60.002	47.619	0.00	0.00	0.00	4.49
227	228	2.908634	CTGTTTGATGTGCTTCGTGTC	58.091	47.619	0.00	0.00	0.00	3.67
228	229	2.545526	CTGTTTGATGTGCTTCGTGTCT	59.454	45.455	0.00	0.00	0.00	3.41
229	230	3.723260	TGTTTGATGTGCTTCGTGTCTA	58.277	40.909	0.00	0.00	0.00	2.59
230	231	4.314961	TGTTTGATGTGCTTCGTGTCTAT	58.685	39.130	0.00	0.00	0.00	1.98
231	232	4.152223	TGTTTGATGTGCTTCGTGTCTATG	59.848	41.667	0.00	0.00	0.00	2.23
232	233	2.270923	TGATGTGCTTCGTGTCTATGC	58.729	47.619	0.00	0.00	0.00	3.14
233	234	2.094026	TGATGTGCTTCGTGTCTATGCT	60.094	45.455	0.00	0.00	0.00	3.79
234	235	2.455674	TGTGCTTCGTGTCTATGCTT	57.544	45.000	0.00	0.00	0.00	3.91
235	236	2.337583	TGTGCTTCGTGTCTATGCTTC	58.662	47.619	0.00	0.00	0.00	3.86
236	237	1.661112	GTGCTTCGTGTCTATGCTTCC	59.339	52.381	0.00	0.00	0.00	3.46
237	238	1.550524	TGCTTCGTGTCTATGCTTCCT	59.449	47.619	0.00	0.00	0.00	3.36
238	239	2.028112	TGCTTCGTGTCTATGCTTCCTT	60.028	45.455	0.00	0.00	0.00	3.36
239	240	2.605366	GCTTCGTGTCTATGCTTCCTTC	59.395	50.000	0.00	0.00	0.00	3.46
240	241	2.961526	TCGTGTCTATGCTTCCTTCC	57.038	50.000	0.00	0.00	0.00	3.46
241	242	2.457598	TCGTGTCTATGCTTCCTTCCT	58.542	47.619	0.00	0.00	0.00	3.36
242	243	2.832129	TCGTGTCTATGCTTCCTTCCTT	59.168	45.455	0.00	0.00	0.00	3.36
243	244	3.260884	TCGTGTCTATGCTTCCTTCCTTT	59.739	43.478	0.00	0.00	0.00	3.11
244	245	4.003648	CGTGTCTATGCTTCCTTCCTTTT	58.996	43.478	0.00	0.00	0.00	2.27
245	246	4.142816	CGTGTCTATGCTTCCTTCCTTTTG	60.143	45.833	0.00	0.00	0.00	2.44
246	247	5.003804	GTGTCTATGCTTCCTTCCTTTTGA	58.996	41.667	0.00	0.00	0.00	2.69
247	248	5.649831	GTGTCTATGCTTCCTTCCTTTTGAT	59.350	40.000	0.00	0.00	0.00	2.57
248	249	5.882557	TGTCTATGCTTCCTTCCTTTTGATC	59.117	40.000	0.00	0.00	0.00	2.92
249	250	5.007136	GTCTATGCTTCCTTCCTTTTGATCG	59.993	44.000	0.00	0.00	0.00	3.69
250	251	3.140325	TGCTTCCTTCCTTTTGATCGT	57.860	42.857	0.00	0.00	0.00	3.73
251	252	3.074412	TGCTTCCTTCCTTTTGATCGTC	58.926	45.455	0.00	0.00	0.00	4.20
252	253	2.094417	GCTTCCTTCCTTTTGATCGTCG	59.906	50.000	0.00	0.00	0.00	5.12
253	254	3.585862	CTTCCTTCCTTTTGATCGTCGA	58.414	45.455	0.00	0.00	0.00	4.20
254	255	3.671008	TCCTTCCTTTTGATCGTCGAA	57.329	42.857	0.00	0.00	0.00	3.71
255	256	3.323243	TCCTTCCTTTTGATCGTCGAAC	58.677	45.455	0.00	0.00	0.00	3.95
256	257	3.006537	TCCTTCCTTTTGATCGTCGAACT	59.993	43.478	0.00	0.00	0.00	3.01
257	258	3.746492	CCTTCCTTTTGATCGTCGAACTT	59.254	43.478	0.00	0.00	0.00	2.66
258	259	4.213482	CCTTCCTTTTGATCGTCGAACTTT	59.787	41.667	0.00	0.00	0.00	2.66
259	260	5.277828	CCTTCCTTTTGATCGTCGAACTTTT	60.278	40.000	0.00	0.00	0.00	2.27
260	261	5.090652	TCCTTTTGATCGTCGAACTTTTG	57.909	39.130	0.00	0.00	0.00	2.44
261	262	4.024387	TCCTTTTGATCGTCGAACTTTTGG	60.024	41.667	0.00	0.00	0.00	3.28
262	263	3.889196	TTTGATCGTCGAACTTTTGGG	57.111	42.857	0.00	0.00	0.00	4.12
263	264	1.153353	TGATCGTCGAACTTTTGGGC	58.847	50.000	0.00	0.00	0.00	5.36
264	265	1.153353	GATCGTCGAACTTTTGGGCA	58.847	50.000	0.00	0.00	0.00	5.36
265	266	1.737793	GATCGTCGAACTTTTGGGCAT	59.262	47.619	0.00	0.00	0.00	4.40
266	267	0.871722	TCGTCGAACTTTTGGGCATG	59.128	50.000	0.00	0.00	0.00	4.06
267	268	0.591170	CGTCGAACTTTTGGGCATGT	59.409	50.000	0.00	0.00	0.00	3.21
268	269	1.001815	CGTCGAACTTTTGGGCATGTT	60.002	47.619	0.00	0.00	0.00	2.71
269	270	2.542824	CGTCGAACTTTTGGGCATGTTT	60.543	45.455	0.00	0.00	0.00	2.83
270	271	2.794350	GTCGAACTTTTGGGCATGTTTG	59.206	45.455	0.00	0.00	0.00	2.93
271	272	2.690497	TCGAACTTTTGGGCATGTTTGA	59.310	40.909	0.00	0.00	32.38	2.69
272	273	3.320541	TCGAACTTTTGGGCATGTTTGAT	59.679	39.130	0.00	0.00	30.55	2.57
273	274	3.674753	CGAACTTTTGGGCATGTTTGATC	59.325	43.478	0.00	0.00	0.00	2.92
274	275	3.302365	ACTTTTGGGCATGTTTGATCG	57.698	42.857	0.00	0.00	0.00	3.69
275	276	1.994779	CTTTTGGGCATGTTTGATCGC	59.005	47.619	0.00	0.00	0.00	4.58
276	277	0.246086	TTTGGGCATGTTTGATCGCC	59.754	50.000	0.00	0.00	44.10	5.54
277	278	1.932011	TTGGGCATGTTTGATCGCCG	61.932	55.000	0.00	0.00	45.85	6.46
278	279	2.112198	GGGCATGTTTGATCGCCGA	61.112	57.895	0.00	0.00	45.85	5.54
279	280	1.653094	GGGCATGTTTGATCGCCGAA	61.653	55.000	0.00	0.00	45.85	4.30
280	281	0.248215	GGCATGTTTGATCGCCGAAG	60.248	55.000	0.00	0.00	34.26	3.79
281	282	0.447801	GCATGTTTGATCGCCGAAGT	59.552	50.000	0.00	0.00	0.00	3.01
282	283	1.791555	GCATGTTTGATCGCCGAAGTG	60.792	52.381	0.00	0.00	0.00	3.16
283	284	1.464608	CATGTTTGATCGCCGAAGTGT	59.535	47.619	0.00	0.00	0.00	3.55
284	285	0.865111	TGTTTGATCGCCGAAGTGTG	59.135	50.000	0.00	0.00	0.00	3.82
285	286	0.165944	GTTTGATCGCCGAAGTGTGG	59.834	55.000	0.00	0.00	0.00	4.17
293	294	3.157727	CCGAAGTGTGGCATGATGA	57.842	52.632	0.00	0.00	0.00	2.92
294	295	1.671979	CCGAAGTGTGGCATGATGAT	58.328	50.000	0.00	0.00	0.00	2.45
295	296	2.019249	CCGAAGTGTGGCATGATGATT	58.981	47.619	0.00	0.00	0.00	2.57
296	297	3.205338	CCGAAGTGTGGCATGATGATTA	58.795	45.455	0.00	0.00	0.00	1.75
297	298	3.002656	CCGAAGTGTGGCATGATGATTAC	59.997	47.826	0.00	0.00	0.00	1.89
298	299	3.002656	CGAAGTGTGGCATGATGATTACC	59.997	47.826	0.00	0.00	0.00	2.85
299	300	2.564771	AGTGTGGCATGATGATTACCG	58.435	47.619	0.00	0.00	0.00	4.02
300	301	2.170397	AGTGTGGCATGATGATTACCGA	59.830	45.455	0.00	0.00	0.00	4.69
301	302	2.287915	GTGTGGCATGATGATTACCGAC	59.712	50.000	0.00	0.00	0.00	4.79
302	303	2.170397	TGTGGCATGATGATTACCGACT	59.830	45.455	0.00	0.00	0.00	4.18
303	304	3.206150	GTGGCATGATGATTACCGACTT	58.794	45.455	0.00	0.00	0.00	3.01
304	305	3.002656	GTGGCATGATGATTACCGACTTG	59.997	47.826	0.00	0.00	0.00	3.16
305	306	3.206150	GGCATGATGATTACCGACTTGT	58.794	45.455	0.00	0.00	0.00	3.16
306	307	4.141824	TGGCATGATGATTACCGACTTGTA	60.142	41.667	0.00	0.00	0.00	2.41
307	308	4.814234	GGCATGATGATTACCGACTTGTAA	59.186	41.667	0.00	0.00	35.33	2.41
308	309	5.277345	GGCATGATGATTACCGACTTGTAAC	60.277	44.000	0.00	0.00	33.78	2.50
309	310	5.293324	GCATGATGATTACCGACTTGTAACA	59.707	40.000	0.00	0.00	33.78	2.41
310	311	6.017934	GCATGATGATTACCGACTTGTAACAT	60.018	38.462	0.00	0.00	33.78	2.71
311	312	6.902224	TGATGATTACCGACTTGTAACATG	57.098	37.500	0.00	0.00	33.78	3.21
312	313	5.815222	TGATGATTACCGACTTGTAACATGG	59.185	40.000	0.00	0.00	33.78	3.66
313	314	5.155278	TGATTACCGACTTGTAACATGGT	57.845	39.130	0.00	0.00	33.78	3.55
314	315	4.932799	TGATTACCGACTTGTAACATGGTG	59.067	41.667	0.00	0.00	33.78	4.17
315	316	4.603989	TTACCGACTTGTAACATGGTGA	57.396	40.909	0.00	0.00	0.00	4.02
316	317	3.695830	ACCGACTTGTAACATGGTGAT	57.304	42.857	0.00	0.00	0.00	3.06
317	318	3.596214	ACCGACTTGTAACATGGTGATC	58.404	45.455	0.00	0.00	0.00	2.92
318	319	3.007506	ACCGACTTGTAACATGGTGATCA	59.992	43.478	0.00	0.00	0.00	2.92
319	320	4.191544	CCGACTTGTAACATGGTGATCAT	58.808	43.478	0.00	0.00	36.31	2.45
320	321	4.271049	CCGACTTGTAACATGGTGATCATC	59.729	45.833	0.00	0.00	32.92	2.92
321	322	4.869861	CGACTTGTAACATGGTGATCATCA	59.130	41.667	11.92	11.92	32.92	3.07
322	323	5.351189	CGACTTGTAACATGGTGATCATCAA	59.649	40.000	13.76	0.00	32.92	2.57
323	324	6.128309	CGACTTGTAACATGGTGATCATCAAA	60.128	38.462	13.76	0.34	32.92	2.69
324	325	6.913170	ACTTGTAACATGGTGATCATCAAAC	58.087	36.000	13.76	9.56	32.92	2.93
325	326	6.716628	ACTTGTAACATGGTGATCATCAAACT	59.283	34.615	13.76	2.60	32.92	2.66
326	327	7.231317	ACTTGTAACATGGTGATCATCAAACTT	59.769	33.333	13.76	7.02	32.92	2.66
327	328	6.912082	TGTAACATGGTGATCATCAAACTTG	58.088	36.000	13.76	9.22	32.92	3.16
328	329	6.489700	TGTAACATGGTGATCATCAAACTTGT	59.510	34.615	13.76	9.91	32.92	3.16
329	330	5.381174	ACATGGTGATCATCAAACTTGTG	57.619	39.130	13.76	8.08	32.92	3.33
330	331	4.219070	ACATGGTGATCATCAAACTTGTGG	59.781	41.667	13.76	0.00	32.92	4.17
331	332	2.557924	TGGTGATCATCAAACTTGTGGC	59.442	45.455	6.09	0.00	0.00	5.01
332	333	2.414559	GGTGATCATCAAACTTGTGGCG	60.415	50.000	0.00	0.00	0.00	5.69
333	334	2.226437	GTGATCATCAAACTTGTGGCGT	59.774	45.455	0.00	0.00	0.00	5.68
334	335	2.884012	TGATCATCAAACTTGTGGCGTT	59.116	40.909	0.00	0.00	0.00	4.84
335	336	3.317711	TGATCATCAAACTTGTGGCGTTT	59.682	39.130	0.00	0.00	35.12	3.60
336	337	3.791973	TCATCAAACTTGTGGCGTTTT	57.208	38.095	0.00	0.00	32.64	2.43
337	338	4.116747	TCATCAAACTTGTGGCGTTTTT	57.883	36.364	0.00	0.00	32.64	1.94
356	357	4.759516	TTTTCGCAGTGGGAAAGATAAC	57.240	40.909	27.73	0.00	43.31	1.89
357	358	3.695830	TTCGCAGTGGGAAAGATAACT	57.304	42.857	19.32	0.00	31.75	2.24
358	359	3.695830	TCGCAGTGGGAAAGATAACTT	57.304	42.857	7.54	0.00	38.05	2.66
360	361	3.751175	TCGCAGTGGGAAAGATAACTTTG	59.249	43.478	7.54	0.00	44.97	2.77
361	362	3.751175	CGCAGTGGGAAAGATAACTTTGA	59.249	43.478	2.29	0.00	44.97	2.69
362	363	4.396166	CGCAGTGGGAAAGATAACTTTGAT	59.604	41.667	2.29	0.00	44.97	2.57
363	364	5.106157	CGCAGTGGGAAAGATAACTTTGATT	60.106	40.000	2.29	0.00	44.97	2.57
364	365	6.570378	CGCAGTGGGAAAGATAACTTTGATTT	60.570	38.462	2.29	0.00	44.97	2.17
365	366	7.154656	GCAGTGGGAAAGATAACTTTGATTTT	58.845	34.615	2.29	0.00	44.97	1.82
366	367	7.657354	GCAGTGGGAAAGATAACTTTGATTTTT	59.343	33.333	2.29	0.00	44.97	1.94
367	368	8.981647	CAGTGGGAAAGATAACTTTGATTTTTG	58.018	33.333	2.29	0.00	44.97	2.44
368	369	8.150296	AGTGGGAAAGATAACTTTGATTTTTGG	58.850	33.333	2.29	0.00	44.97	3.28
369	370	7.387673	GTGGGAAAGATAACTTTGATTTTTGGG	59.612	37.037	2.29	0.00	44.97	4.12
370	371	6.371548	GGGAAAGATAACTTTGATTTTTGGGC	59.628	38.462	2.29	0.00	44.97	5.36
371	372	6.090763	GGAAAGATAACTTTGATTTTTGGGCG	59.909	38.462	2.29	0.00	44.97	6.13
372	373	5.722021	AGATAACTTTGATTTTTGGGCGT	57.278	34.783	0.00	0.00	0.00	5.68
373	374	6.827586	AGATAACTTTGATTTTTGGGCGTA	57.172	33.333	0.00	0.00	0.00	4.42
374	375	7.404671	AGATAACTTTGATTTTTGGGCGTAT	57.595	32.000	0.00	0.00	0.00	3.06
375	376	7.257722	AGATAACTTTGATTTTTGGGCGTATG	58.742	34.615	0.00	0.00	0.00	2.39
376	377	4.186856	ACTTTGATTTTTGGGCGTATGG	57.813	40.909	0.00	0.00	0.00	2.74
377	378	3.829601	ACTTTGATTTTTGGGCGTATGGA	59.170	39.130	0.00	0.00	0.00	3.41
378	379	4.082245	ACTTTGATTTTTGGGCGTATGGAG	60.082	41.667	0.00	0.00	0.00	3.86
379	380	2.374184	TGATTTTTGGGCGTATGGAGG	58.626	47.619	0.00	0.00	0.00	4.30
380	381	1.067060	GATTTTTGGGCGTATGGAGGC	59.933	52.381	0.00	0.00	35.66	4.70
385	386	2.188469	GGCGTATGGAGGCCGAAA	59.812	61.111	0.00	0.00	46.11	3.46
386	387	1.227853	GGCGTATGGAGGCCGAAAT	60.228	57.895	0.00	0.00	46.11	2.17
387	388	1.228657	GGCGTATGGAGGCCGAAATC	61.229	60.000	0.00	0.00	46.11	2.17
388	389	0.249911	GCGTATGGAGGCCGAAATCT	60.250	55.000	0.00	0.00	0.00	2.40
389	390	1.502231	CGTATGGAGGCCGAAATCTG	58.498	55.000	0.00	0.00	0.00	2.90
390	391	1.873903	CGTATGGAGGCCGAAATCTGG	60.874	57.143	0.00	0.00	0.00	3.86
391	392	1.416401	GTATGGAGGCCGAAATCTGGA	59.584	52.381	0.00	0.00	0.00	3.86
392	393	0.918983	ATGGAGGCCGAAATCTGGAA	59.081	50.000	0.00	0.00	0.00	3.53
393	394	0.253044	TGGAGGCCGAAATCTGGAAG	59.747	55.000	0.00	0.00	0.00	3.46
394	395	1.098129	GGAGGCCGAAATCTGGAAGC	61.098	60.000	0.00	0.00	0.00	3.86
395	396	1.432270	GAGGCCGAAATCTGGAAGCG	61.432	60.000	0.00	0.00	0.00	4.68
396	397	2.405191	GCCGAAATCTGGAAGCGC	59.595	61.111	0.00	0.00	0.00	5.92
397	398	2.703409	CCGAAATCTGGAAGCGCG	59.297	61.111	0.00	0.00	0.00	6.86
398	399	2.703409	CGAAATCTGGAAGCGCGG	59.297	61.111	8.83	0.00	0.00	6.46
399	400	2.405191	GAAATCTGGAAGCGCGGC	59.595	61.111	8.83	0.00	0.00	6.53
400	401	2.045926	AAATCTGGAAGCGCGGCT	60.046	55.556	8.83	2.05	42.56	5.52
401	402	2.315038	GAAATCTGGAAGCGCGGCTG	62.315	60.000	8.83	0.00	39.62	4.85
402	403	4.845580	ATCTGGAAGCGCGGCTGG	62.846	66.667	8.83	0.00	39.62	4.85
405	406	4.634703	TGGAAGCGCGGCTGGAAA	62.635	61.111	8.83	0.00	39.62	3.13
406	407	4.103103	GGAAGCGCGGCTGGAAAC	62.103	66.667	8.83	0.00	39.62	2.78
407	408	3.050275	GAAGCGCGGCTGGAAACT	61.050	61.111	8.83	0.00	39.62	2.66
408	409	3.028366	GAAGCGCGGCTGGAAACTC	62.028	63.158	8.83	0.00	39.62	3.01
411	412	3.479269	CGCGGCTGGAAACTCGAC	61.479	66.667	0.00	0.00	0.00	4.20
412	413	3.479269	GCGGCTGGAAACTCGACG	61.479	66.667	0.00	0.00	36.31	5.12
413	414	3.479269	CGGCTGGAAACTCGACGC	61.479	66.667	0.00	0.00	0.00	5.19
414	415	2.357034	GGCTGGAAACTCGACGCA	60.357	61.111	0.00	0.00	0.00	5.24
415	416	1.959226	GGCTGGAAACTCGACGCAA	60.959	57.895	0.00	0.00	0.00	4.85
416	417	1.503818	GGCTGGAAACTCGACGCAAA	61.504	55.000	0.00	0.00	0.00	3.68
417	418	0.384353	GCTGGAAACTCGACGCAAAC	60.384	55.000	0.00	0.00	0.00	2.93
419	420	1.438222	GGAAACTCGACGCAAACGC	60.438	57.895	0.00	0.00	45.53	4.84
429	430	3.521417	GCAAACGCGAAAACGCAT	58.479	50.000	15.93	0.00	36.19	4.73
430	431	1.843344	GCAAACGCGAAAACGCATT	59.157	47.368	15.93	2.75	36.19	3.56
431	432	0.179309	GCAAACGCGAAAACGCATTC	60.179	50.000	15.93	0.00	36.19	2.67
436	437	2.472491	CGAAAACGCATTCGCCGA	59.528	55.556	9.77	0.00	44.69	5.54
437	438	1.577616	CGAAAACGCATTCGCCGAG	60.578	57.895	9.77	0.00	44.69	4.63
438	439	1.495951	GAAAACGCATTCGCCGAGT	59.504	52.632	0.00	0.00	39.84	4.18
439	440	0.789383	GAAAACGCATTCGCCGAGTG	60.789	55.000	5.12	5.12	39.84	3.51
440	441	2.780149	AAAACGCATTCGCCGAGTGC	62.780	55.000	22.69	22.69	40.95	4.40
452	453	4.704833	GAGTGCGCTTGGGGCTGA	62.705	66.667	9.73	0.00	42.10	4.26
453	454	4.269523	AGTGCGCTTGGGGCTGAA	62.270	61.111	9.73	0.00	42.10	3.02
454	455	4.043200	GTGCGCTTGGGGCTGAAC	62.043	66.667	9.73	0.00	42.10	3.18
458	459	4.660938	GCTTGGGGCTGAACGGGT	62.661	66.667	0.00	0.00	38.06	5.28
459	460	2.672996	CTTGGGGCTGAACGGGTG	60.673	66.667	0.00	0.00	0.00	4.61
460	461	4.278513	TTGGGGCTGAACGGGTGG	62.279	66.667	0.00	0.00	0.00	4.61
462	463	4.410400	GGGGCTGAACGGGTGGAG	62.410	72.222	0.00	0.00	0.00	3.86
463	464	3.319198	GGGCTGAACGGGTGGAGA	61.319	66.667	0.00	0.00	0.00	3.71
464	465	2.670148	GGGCTGAACGGGTGGAGAT	61.670	63.158	0.00	0.00	0.00	2.75
465	466	1.450312	GGCTGAACGGGTGGAGATG	60.450	63.158	0.00	0.00	0.00	2.90
466	467	2.109126	GCTGAACGGGTGGAGATGC	61.109	63.158	0.00	0.00	0.00	3.91
467	468	1.599047	CTGAACGGGTGGAGATGCT	59.401	57.895	0.00	0.00	0.00	3.79
468	469	0.742281	CTGAACGGGTGGAGATGCTG	60.742	60.000	0.00	0.00	0.00	4.41
469	470	1.296715	GAACGGGTGGAGATGCTGT	59.703	57.895	0.00	0.00	0.00	4.40
470	471	0.535335	GAACGGGTGGAGATGCTGTA	59.465	55.000	0.00	0.00	0.00	2.74
471	472	0.981183	AACGGGTGGAGATGCTGTAA	59.019	50.000	0.00	0.00	0.00	2.41
472	473	0.981183	ACGGGTGGAGATGCTGTAAA	59.019	50.000	0.00	0.00	0.00	2.01
473	474	1.349688	ACGGGTGGAGATGCTGTAAAA	59.650	47.619	0.00	0.00	0.00	1.52
474	475	2.009774	CGGGTGGAGATGCTGTAAAAG	58.990	52.381	0.00	0.00	0.00	2.27
475	476	2.354704	CGGGTGGAGATGCTGTAAAAGA	60.355	50.000	0.00	0.00	0.00	2.52
476	477	3.682718	CGGGTGGAGATGCTGTAAAAGAT	60.683	47.826	0.00	0.00	0.00	2.40
477	478	3.879892	GGGTGGAGATGCTGTAAAAGATC	59.120	47.826	0.00	0.00	0.00	2.75
478	479	3.879892	GGTGGAGATGCTGTAAAAGATCC	59.120	47.826	0.00	0.00	0.00	3.36
479	480	3.879892	GTGGAGATGCTGTAAAAGATCCC	59.120	47.826	0.00	0.00	0.00	3.85
480	481	3.523157	TGGAGATGCTGTAAAAGATCCCA	59.477	43.478	0.00	0.00	0.00	4.37
481	482	4.133078	GGAGATGCTGTAAAAGATCCCAG	58.867	47.826	0.00	0.00	0.00	4.45
482	483	4.133078	GAGATGCTGTAAAAGATCCCAGG	58.867	47.826	0.00	0.00	0.00	4.45
483	484	2.806945	TGCTGTAAAAGATCCCAGGG	57.193	50.000	0.00	0.00	0.00	4.45
484	485	2.274542	TGCTGTAAAAGATCCCAGGGA	58.725	47.619	11.90	11.90	35.55	4.20
485	486	2.647299	TGCTGTAAAAGATCCCAGGGAA	59.353	45.455	13.94	0.00	34.34	3.97
486	487	3.075283	TGCTGTAAAAGATCCCAGGGAAA	59.925	43.478	13.94	0.00	34.34	3.13
487	488	4.264352	TGCTGTAAAAGATCCCAGGGAAAT	60.264	41.667	13.94	0.14	34.34	2.17
488	489	4.098501	GCTGTAAAAGATCCCAGGGAAATG	59.901	45.833	13.94	0.00	34.34	2.32
489	490	4.609301	TGTAAAAGATCCCAGGGAAATGG	58.391	43.478	13.94	0.00	40.29	3.16
490	491	3.852858	AAAAGATCCCAGGGAAATGGT	57.147	42.857	13.94	0.00	38.81	3.55
491	492	3.852858	AAAGATCCCAGGGAAATGGTT	57.147	42.857	13.94	0.00	38.81	3.67
494	495	2.172717	AGATCCCAGGGAAATGGTTACG	59.827	50.000	13.94	0.00	38.81	3.18
504	505	1.597797	AATGGTTACGTCCTCGCCGA	61.598	55.000	0.00	0.00	41.18	5.54
1031	1045	1.303282	GATTCCTGGAAAGGCCGGT	59.697	57.895	14.03	0.00	41.87	5.28
1081	1095	1.327764	GCCCTTTGACGCGAGAATAAG	59.672	52.381	15.93	8.56	0.00	1.73
1082	1096	2.888594	CCCTTTGACGCGAGAATAAGA	58.111	47.619	15.93	0.00	0.00	2.10
1083	1097	3.259064	CCCTTTGACGCGAGAATAAGAA	58.741	45.455	15.93	0.00	0.00	2.52
1084	1098	3.307242	CCCTTTGACGCGAGAATAAGAAG	59.693	47.826	15.93	5.05	0.00	2.85
1241	1255	2.157474	GGCGGTGAAATTTTGTGCATTC	59.843	45.455	0.00	0.00	0.00	2.67
1261	1276	2.322081	CCTTCTTTTCCGCGGCGAA	61.322	57.895	25.92	17.94	0.00	4.70
1284	1307	1.063006	CAATGGACGGATGCTTGCG	59.937	57.895	11.94	11.94	43.08	4.85
1304	1327	4.988598	CTGCAGGTGGTCGCCGTT	62.989	66.667	5.57	0.00	0.00	4.44
1436	1459	3.984193	CTTGCCTGCCCCCTCTTCG	62.984	68.421	0.00	0.00	0.00	3.79
1467	1490	2.941720	GGGTGAATGAATGAGTGAGAGC	59.058	50.000	0.00	0.00	0.00	4.09
1633	1657	6.929049	CCTCTATATGCGGTTGAATTTCTGTA	59.071	38.462	0.00	0.00	0.00	2.74
1787	1811	4.143009	GCTTTCTTCTCAAGGTTAAGAGCG	60.143	45.833	0.00	0.00	31.30	5.03
1843	1867	1.361993	GGCGGTGCAAACAATGTCA	59.638	52.632	0.00	0.00	0.00	3.58
1883	1907	7.412137	TCATGAATTATGCATTCTGTACTCG	57.588	36.000	3.54	0.00	41.91	4.18
1908	1932	3.485394	TGCTTCTTTGCACAATCCAGTA	58.515	40.909	0.00	0.00	38.12	2.74
1916	1940	3.534554	TGCACAATCCAGTATAGCAGTG	58.465	45.455	0.00	0.00	0.00	3.66
1964	1988	5.710099	ACACTGTATGGTTGGTAGGATTTTG	59.290	40.000	0.00	0.00	0.00	2.44
1965	1989	5.710099	CACTGTATGGTTGGTAGGATTTTGT	59.290	40.000	0.00	0.00	0.00	2.83
1966	1990	6.208599	CACTGTATGGTTGGTAGGATTTTGTT	59.791	38.462	0.00	0.00	0.00	2.83
1967	1991	6.208599	ACTGTATGGTTGGTAGGATTTTGTTG	59.791	38.462	0.00	0.00	0.00	3.33
1968	1992	5.478679	TGTATGGTTGGTAGGATTTTGTTGG	59.521	40.000	0.00	0.00	0.00	3.77
1969	1993	4.186077	TGGTTGGTAGGATTTTGTTGGA	57.814	40.909	0.00	0.00	0.00	3.53
1970	1994	3.892588	TGGTTGGTAGGATTTTGTTGGAC	59.107	43.478	0.00	0.00	0.00	4.02
1971	1995	3.257375	GGTTGGTAGGATTTTGTTGGACC	59.743	47.826	0.00	0.00	0.00	4.46
1972	1996	4.149598	GTTGGTAGGATTTTGTTGGACCT	58.850	43.478	0.00	0.00	35.11	3.85
1973	1997	4.463050	TGGTAGGATTTTGTTGGACCTT	57.537	40.909	0.00	0.00	32.90	3.50
1974	1998	4.148838	TGGTAGGATTTTGTTGGACCTTG	58.851	43.478	0.00	0.00	32.90	3.61
1975	1999	4.149598	GGTAGGATTTTGTTGGACCTTGT	58.850	43.478	0.00	0.00	32.90	3.16
1976	2000	4.022329	GGTAGGATTTTGTTGGACCTTGTG	60.022	45.833	0.00	0.00	32.90	3.33
1977	2001	2.965147	AGGATTTTGTTGGACCTTGTGG	59.035	45.455	0.00	0.00	39.83	4.17
1978	2002	2.547855	GGATTTTGTTGGACCTTGTGGC	60.548	50.000	0.00	0.00	36.63	5.01
1979	2003	1.859302	TTTTGTTGGACCTTGTGGCT	58.141	45.000	0.00	0.00	36.63	4.75
1980	2004	1.110442	TTTGTTGGACCTTGTGGCTG	58.890	50.000	0.00	0.00	36.63	4.85
1981	2005	0.033601	TTGTTGGACCTTGTGGCTGT	60.034	50.000	0.00	0.00	36.63	4.40
1982	2006	0.751277	TGTTGGACCTTGTGGCTGTG	60.751	55.000	0.00	0.00	36.63	3.66
1983	2007	1.152777	TTGGACCTTGTGGCTGTGG	60.153	57.895	0.00	0.00	36.63	4.17
1984	2008	1.932156	TTGGACCTTGTGGCTGTGGT	61.932	55.000	0.00	0.00	36.63	4.16
1985	2009	1.898574	GGACCTTGTGGCTGTGGTG	60.899	63.158	0.00	0.00	36.63	4.17
1986	2010	1.898574	GACCTTGTGGCTGTGGTGG	60.899	63.158	0.00	0.00	36.63	4.61
1987	2011	2.195683	CCTTGTGGCTGTGGTGGT	59.804	61.111	0.00	0.00	0.00	4.16
1988	2012	1.455587	CCTTGTGGCTGTGGTGGTT	60.456	57.895	0.00	0.00	0.00	3.67
1989	2013	1.042559	CCTTGTGGCTGTGGTGGTTT	61.043	55.000	0.00	0.00	0.00	3.27
1990	2014	0.102844	CTTGTGGCTGTGGTGGTTTG	59.897	55.000	0.00	0.00	0.00	2.93
1991	2015	1.954362	TTGTGGCTGTGGTGGTTTGC	61.954	55.000	0.00	0.00	0.00	3.68
1992	2016	2.127232	GTGGCTGTGGTGGTTTGCT	61.127	57.895	0.00	0.00	0.00	3.91
1993	2017	1.381056	TGGCTGTGGTGGTTTGCTT	60.381	52.632	0.00	0.00	0.00	3.91
1994	2018	0.975040	TGGCTGTGGTGGTTTGCTTT	60.975	50.000	0.00	0.00	0.00	3.51
1995	2019	1.036707	GGCTGTGGTGGTTTGCTTTA	58.963	50.000	0.00	0.00	0.00	1.85
1996	2020	1.618343	GGCTGTGGTGGTTTGCTTTAT	59.382	47.619	0.00	0.00	0.00	1.40
1997	2021	2.823154	GGCTGTGGTGGTTTGCTTTATA	59.177	45.455	0.00	0.00	0.00	0.98
1998	2022	3.447229	GGCTGTGGTGGTTTGCTTTATAT	59.553	43.478	0.00	0.00	0.00	0.86
1999	2023	4.642885	GGCTGTGGTGGTTTGCTTTATATA	59.357	41.667	0.00	0.00	0.00	0.86
2000	2024	5.301805	GGCTGTGGTGGTTTGCTTTATATAT	59.698	40.000	0.00	0.00	0.00	0.86
2001	2025	6.488683	GGCTGTGGTGGTTTGCTTTATATATA	59.511	38.462	0.00	0.00	0.00	0.86
2002	2026	7.013846	GGCTGTGGTGGTTTGCTTTATATATAA	59.986	37.037	0.81	0.81	0.00	0.98
2003	2027	8.410141	GCTGTGGTGGTTTGCTTTATATATAAA	58.590	33.333	15.47	15.47	0.00	1.40
2016	2040	4.783764	ATATATAAAGCGGGGCAAAAGC	57.216	40.909	0.00	0.00	0.00	3.51
2017	2041	1.107945	TATAAAGCGGGGCAAAAGCC	58.892	50.000	0.00	0.00	0.00	4.35
2018	2042	0.614697	ATAAAGCGGGGCAAAAGCCT	60.615	50.000	6.45	0.00	0.00	4.58
2019	2043	0.830023	TAAAGCGGGGCAAAAGCCTT	60.830	50.000	6.45	0.00	0.00	4.35
2020	2044	1.695114	AAAGCGGGGCAAAAGCCTTT	61.695	50.000	6.45	0.00	0.00	3.11
2021	2045	1.695114	AAGCGGGGCAAAAGCCTTTT	61.695	50.000	6.45	0.00	0.00	2.27
2022	2046	1.227823	GCGGGGCAAAAGCCTTTTT	60.228	52.632	0.00	0.00	36.97	1.94
2023	2047	1.227999	GCGGGGCAAAAGCCTTTTTC	61.228	55.000	0.00	0.00	34.34	2.29
2024	2048	0.943835	CGGGGCAAAAGCCTTTTTCG	60.944	55.000	0.00	0.00	34.34	3.46
2064	2088	0.107214	GGTTCATTGATCCGAGGGCA	60.107	55.000	0.00	0.00	0.00	5.36
2117	2161	2.143925	GGGTATGCGCAGGAAGATAAC	58.856	52.381	18.32	4.35	0.00	1.89
2130	2174	5.482175	CAGGAAGATAACGGGGAGAAGATAT	59.518	44.000	0.00	0.00	0.00	1.63
2177	2221	7.093945	GGAAACTTTATTGGTTGATAGCTTCCA	60.094	37.037	0.00	0.00	0.00	3.53
2178	2222	7.961326	AACTTTATTGGTTGATAGCTTCCAT	57.039	32.000	0.00	0.00	0.00	3.41
2186	2230	6.194235	TGGTTGATAGCTTCCATAAACCAAT	58.806	36.000	12.79	0.00	41.81	3.16
2258	2302	6.183347	AGGCTGCAATACAAATAGAACTCTT	58.817	36.000	0.50	0.00	0.00	2.85
2325	2369	7.575155	GCCTAAGAACATAAAAACTGGAAGGTC	60.575	40.741	0.00	0.00	39.30	3.85
2350	2394	1.132495	ACCCTGAGGTCCTAACCAACT	60.132	52.381	0.00	0.00	46.45	3.16
2402	2447	7.413000	CCAACATAACAGTTTAATCGAGAGTGG	60.413	40.741	0.00	0.00	0.00	4.00
2527	2572	3.480470	CAAGCTGAGAAAGGAGTTTCCA	58.520	45.455	0.00	0.00	42.84	3.53
2597	2642	4.648651	TCTTTACTTCTTTGTAGCCCACC	58.351	43.478	0.00	0.00	0.00	4.61
2616	2661	0.806868	CGAGTGGCAGCAACATCATT	59.193	50.000	1.78	0.00	0.00	2.57
2828	2874	3.395639	GGGACGAATATTAACCATGCGA	58.604	45.455	6.33	0.00	0.00	5.10
2868	2914	2.158957	GGGAATCATGGTCTGCTTACGA	60.159	50.000	0.00	0.00	0.00	3.43
2896	2942	9.251440	TCTGGATGAATTCTGATTTTCTTCAAT	57.749	29.630	7.05	0.00	31.25	2.57
2964	3010	3.696051	TGGAAGGCACTAAAGCATGATTC	59.304	43.478	0.00	0.00	38.49	2.52
2999	3045	6.015688	AGGTTGTCGTAGATACACTTCTTTGA	60.016	38.462	0.00	0.00	40.67	2.69
3136	3185	8.058847	TGACTATTTTATCAAGCCATACCCTTT	58.941	33.333	0.00	0.00	0.00	3.11
3170	3219	8.860780	AGAAAAGAATCTATTCAGCAGAACTT	57.139	30.769	5.55	0.00	39.23	2.66
3244	3293	5.242434	ACACCTGATAAAAGCGTGTAATCA	58.758	37.500	0.00	0.00	35.97	2.57
3580	3629	2.432456	TGCTGCCGATCACGTGAC	60.432	61.111	22.71	13.72	37.88	3.67
3803	3852	2.938451	GCCGGGTAACATACACCTAAAC	59.062	50.000	2.18	0.00	36.25	2.01
4223	4643	3.282021	GACCAGCTTATCCTGCAATCAA	58.718	45.455	0.00	0.00	0.00	2.57
4410	4830	8.608844	AGTGTTTTACTCGATCTTTCTTGAAT	57.391	30.769	0.00	0.00	33.17	2.57
4540	4960	0.606673	GAAGGCAAGTCCTGTCACCC	60.607	60.000	0.00	0.00	46.94	4.61
4595	5023	4.422073	TTCCATTACTATCCCTGTGCTG	57.578	45.455	0.00	0.00	0.00	4.41
4599	5027	2.691409	TACTATCCCTGTGCTGTTGC	57.309	50.000	0.00	0.00	40.20	4.17
4694	5122	1.168714	GCCTGACACTGGGAACATTC	58.831	55.000	0.00	0.00	41.51	2.67
4707	5135	7.490079	CACTGGGAACATTCATTTGATAACATG	59.510	37.037	0.00	0.00	41.51	3.21
4803	5232	7.550196	ACTGCAAAGAAAACAGTGAAAAATGAT	59.450	29.630	0.00	0.00	42.83	2.45
4895	5324	6.923508	CCTTTCAAGGTGGTCTCAAATTTTAC	59.076	38.462	0.00	0.00	41.41	2.01
5314	5745	4.503910	CTGATCGTTGGTATGACTTGGAA	58.496	43.478	0.00	0.00	0.00	3.53
5315	5746	5.097742	TGATCGTTGGTATGACTTGGAAT	57.902	39.130	0.00	0.00	0.00	3.01
5394	5825	0.994247	AGGTGCCATCATGAGTTCCA	59.006	50.000	0.09	0.00	0.00	3.53
5418	5849	8.807118	CCACACACATGGTTATAGTAGATAGAT	58.193	37.037	0.00	0.00	34.77	1.98
5761	6192	1.202903	GCAGCAGGATTGATCTGGGAT	60.203	52.381	0.00	0.00	33.16	3.85
5872	6303	3.599343	GACAGTAATGGCAGTGACATGA	58.401	45.455	13.53	0.62	28.30	3.07
5904	6335	2.590291	TTGCAACTTGAGGCGCGA	60.590	55.556	12.10	0.00	0.00	5.87
5928	6359	3.127721	GTGCTTTTCATCCAAGTAGAGCC	59.872	47.826	0.00	0.00	0.00	4.70
5934	6365	0.394565	ATCCAAGTAGAGCCGCATCC	59.605	55.000	0.00	0.00	0.00	3.51
5944	6375	4.776322	CCGCATCCTCCGCCAACA	62.776	66.667	0.00	0.00	0.00	3.33
6000	6431	0.817654	CTGATCTGCACCTGTACCGA	59.182	55.000	0.00	0.00	0.00	4.69
6114	6545	1.549170	AGATCAACCAGTGACGGGTAC	59.451	52.381	8.06	0.99	39.72	3.34
6305	6736	2.071778	AGAATGTAAATGGCCCGCAT	57.928	45.000	0.00	0.00	0.00	4.73
6335	6766	0.535102	CTTGTTTGACGCCACCTCCT	60.535	55.000	0.00	0.00	0.00	3.69
6352	6783	3.553508	CCTCCTGTTCCGTAGTTTCGAAA	60.554	47.826	6.47	6.47	0.00	3.46
6384	6815	6.474751	GTCTCAGCTATGCATTTTTGGAATTC	59.525	38.462	3.54	0.00	0.00	2.17
6422	6853	4.809958	TGTAGAATTGTTTCGTTTCACCGA	59.190	37.500	0.00	0.00	36.93	4.69
6424	6855	3.875134	AGAATTGTTTCGTTTCACCGAGT	59.125	39.130	0.00	0.00	38.23	4.18
6536	6969	8.443937	GTTCGAAACTGCTCTTATTACATCTTT	58.556	33.333	0.00	0.00	0.00	2.52
6554	6987	7.168219	ACATCTTTAGAGTAACCATTGCTGAA	58.832	34.615	0.00	0.00	0.00	3.02
6564	6997	2.624838	ACCATTGCTGAAGTTGACTTGG	59.375	45.455	0.30	0.00	36.11	3.61
6574	7007	3.409026	AGTTGACTTGGTAGCTTCCTG	57.591	47.619	11.05	6.22	0.00	3.86
6601	7035	1.335872	GGCGTGTGAGGAAAACAATGG	60.336	52.381	0.00	0.00	0.00	3.16
6610	7044	4.832266	TGAGGAAAACAATGGCATAGTTGT	59.168	37.500	0.00	0.00	40.06	3.32
6622	7056	2.678336	GCATAGTTGTCAACTAGGGTGC	59.322	50.000	29.06	26.35	46.32	5.01
6627	7061	3.393278	AGTTGTCAACTAGGGTGCCTTAA	59.607	43.478	16.74	0.00	40.69	1.85
6665	7099	2.109126	GGCCGTGCAGATTCAGTCC	61.109	63.158	0.00	0.00	0.00	3.85
6749	7184	7.162082	ACTCTGATTAACCCTTTAGTCACAAG	58.838	38.462	0.00	0.00	32.24	3.16
6958	7518	7.939781	ACCTAGATTCTTAAAGAAAATGGGGA	58.060	34.615	0.00	0.00	37.82	4.81
6959	7519	8.398743	ACCTAGATTCTTAAAGAAAATGGGGAA	58.601	33.333	0.00	0.00	37.82	3.97
6971	7548	2.854736	ATGGGGAAGAAAATGAGGGG	57.145	50.000	0.00	0.00	0.00	4.79
6986	7563	2.039879	TGAGGGGTTTTCAGGCTAACTC	59.960	50.000	0.00	0.00	0.00	3.01
6988	7565	2.306219	AGGGGTTTTCAGGCTAACTCTC	59.694	50.000	0.00	0.00	0.00	3.20
6994	7571	5.813157	GGTTTTCAGGCTAACTCTCTGATAC	59.187	44.000	0.00	0.00	37.38	2.24
7023	7600	3.565482	TCAGTTCAGTGAAATTGCACCTC	59.435	43.478	13.26	1.87	39.59	3.85
7025	7602	3.567164	AGTTCAGTGAAATTGCACCTCTG	59.433	43.478	13.26	5.49	39.59	3.35
7030	7607	4.696877	CAGTGAAATTGCACCTCTGATGTA	59.303	41.667	13.26	0.00	39.59	2.29
7032	7609	5.356190	AGTGAAATTGCACCTCTGATGTATG	59.644	40.000	13.26	0.00	39.59	2.39
7127	7708	1.868469	TTGAGGCAAAAATGCAGTGC	58.132	45.000	8.58	8.58	37.55	4.40
7188	7769	2.289320	ACGAAGCTGAATCTTGCAGTCT	60.289	45.455	0.00	0.00	35.81	3.24
7273	7854	3.638160	TCTTGGGAATAATGCAATCCAGC	59.362	43.478	11.73	0.00	34.82	4.85
7305	7886	5.408880	TGGAAGTCAATATACCGTGTTCA	57.591	39.130	0.00	0.00	0.00	3.18
7365	7946	4.749245	AAACAGCGGTTATCAGTTCAAG	57.251	40.909	1.70	0.00	35.82	3.02

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	1.874345	CTCCGTCAAGTACCACGCCT	61.874	60.000	4.49	0.00	34.58	5.52
1	2	1.445582	CTCCGTCAAGTACCACGCC	60.446	63.158	4.49	0.00	34.58	5.68
2	3	2.092882	GCTCCGTCAAGTACCACGC	61.093	63.158	4.49	0.00	34.58	5.34
3	4	1.800315	CGCTCCGTCAAGTACCACG	60.800	63.158	3.26	3.26	35.72	4.94
4	5	2.092882	GCGCTCCGTCAAGTACCAC	61.093	63.158	0.00	0.00	0.00	4.16
5	6	2.260434	GCGCTCCGTCAAGTACCA	59.740	61.111	0.00	0.00	0.00	3.25
6	7	2.879462	CGCGCTCCGTCAAGTACC	60.879	66.667	5.56	0.00	0.00	3.34
7	8	2.879462	CCGCGCTCCGTCAAGTAC	60.879	66.667	5.56	0.00	34.38	2.73
8	9	4.789075	GCCGCGCTCCGTCAAGTA	62.789	66.667	5.56	0.00	34.38	2.24
16	17	2.644555	TTAAGATGAGGCCGCGCTCC	62.645	60.000	5.56	6.65	0.00	4.70
17	18	0.810031	TTTAAGATGAGGCCGCGCTC	60.810	55.000	5.56	3.23	0.00	5.03
18	19	1.090052	GTTTAAGATGAGGCCGCGCT	61.090	55.000	5.56	0.00	0.00	5.92
19	20	1.352056	GTTTAAGATGAGGCCGCGC	59.648	57.895	0.00	0.00	0.00	6.86
20	21	0.742990	TGGTTTAAGATGAGGCCGCG	60.743	55.000	0.00	0.00	0.00	6.46
21	22	1.017387	CTGGTTTAAGATGAGGCCGC	58.983	55.000	0.00	0.00	0.00	6.53
22	23	2.691409	TCTGGTTTAAGATGAGGCCG	57.309	50.000	0.00	0.00	0.00	6.13
29	30	1.133792	CCCGGGCATCTGGTTTAAGAT	60.134	52.381	8.08	0.00	37.74	2.40
30	31	0.254747	CCCGGGCATCTGGTTTAAGA	59.745	55.000	8.08	0.00	37.74	2.10
31	32	1.384222	GCCCGGGCATCTGGTTTAAG	61.384	60.000	40.73	0.00	41.49	1.85
32	33	1.379309	GCCCGGGCATCTGGTTTAA	60.379	57.895	40.73	0.00	41.49	1.52
33	34	2.274104	GCCCGGGCATCTGGTTTA	59.726	61.111	40.73	0.00	41.49	2.01
34	35	4.759205	GGCCCGGGCATCTGGTTT	62.759	66.667	44.46	0.00	44.11	3.27
54	55	3.151710	TAGGGGCGGTGGTCGATG	61.152	66.667	0.00	0.00	42.43	3.84
55	56	3.152400	GTAGGGGCGGTGGTCGAT	61.152	66.667	0.00	0.00	42.43	3.59
61	62	4.814294	GTGAGCGTAGGGGCGGTG	62.814	72.222	0.00	0.00	42.89	4.94
86	87	4.735132	TTTGTCGCTCGGGCTCGG	62.735	66.667	5.94	0.00	36.95	4.63
87	88	3.181967	CTTTGTCGCTCGGGCTCG	61.182	66.667	5.36	0.00	36.09	5.03
88	89	3.491652	GCTTTGTCGCTCGGGCTC	61.492	66.667	5.36	0.00	36.09	4.70
92	93	3.777925	CACCGCTTTGTCGCTCGG	61.778	66.667	0.00	0.00	46.61	4.63
93	94	4.430423	GCACCGCTTTGTCGCTCG	62.430	66.667	0.00	0.00	0.00	5.03
94	95	4.090057	GGCACCGCTTTGTCGCTC	62.090	66.667	0.00	0.00	0.00	5.03
97	98	4.072088	GTCGGCACCGCTTTGTCG	62.072	66.667	3.66	2.26	46.10	4.35
98	99	4.072088	CGTCGGCACCGCTTTGTC	62.072	66.667	3.66	0.00	39.59	3.18
117	118	4.680237	TGCTCGGGCTGTTGGTCG	62.680	66.667	9.62	0.00	39.59	4.79
118	119	3.050275	GTGCTCGGGCTGTTGGTC	61.050	66.667	9.62	0.00	39.59	4.02
119	120	3.832237	CTGTGCTCGGGCTGTTGGT	62.832	63.158	9.62	0.00	39.59	3.67
120	121	3.052082	CTGTGCTCGGGCTGTTGG	61.052	66.667	9.62	0.00	39.59	3.77
121	122	1.572085	CTTCTGTGCTCGGGCTGTTG	61.572	60.000	9.62	0.00	39.59	3.33
122	123	1.302033	CTTCTGTGCTCGGGCTGTT	60.302	57.895	9.62	0.00	39.59	3.16
123	124	2.345244	CTTCTGTGCTCGGGCTGT	59.655	61.111	9.62	0.00	39.59	4.40
124	125	3.123620	GCTTCTGTGCTCGGGCTG	61.124	66.667	9.62	0.00	39.59	4.85
125	126	4.400961	GGCTTCTGTGCTCGGGCT	62.401	66.667	9.62	0.00	39.59	5.19
126	127	4.704833	TGGCTTCTGTGCTCGGGC	62.705	66.667	0.00	0.00	39.26	6.13
127	128	2.743928	GTGGCTTCTGTGCTCGGG	60.744	66.667	0.00	0.00	0.00	5.14
128	129	3.114616	CGTGGCTTCTGTGCTCGG	61.115	66.667	0.00	0.00	0.00	4.63
129	130	2.356313	ACGTGGCTTCTGTGCTCG	60.356	61.111	0.00	0.00	36.79	5.03
130	131	2.375766	CGACGTGGCTTCTGTGCTC	61.376	63.158	0.00	0.00	0.00	4.26
131	132	2.356313	CGACGTGGCTTCTGTGCT	60.356	61.111	0.00	0.00	0.00	4.40
132	133	2.355837	TCGACGTGGCTTCTGTGC	60.356	61.111	0.00	0.00	0.00	4.57
133	134	1.299850	TGTCGACGTGGCTTCTGTG	60.300	57.895	11.62	0.00	0.00	3.66
134	135	1.299926	GTGTCGACGTGGCTTCTGT	60.300	57.895	11.62	0.00	0.00	3.41
135	136	2.022129	GGTGTCGACGTGGCTTCTG	61.022	63.158	11.62	0.00	0.00	3.02
136	137	2.338984	GGTGTCGACGTGGCTTCT	59.661	61.111	11.62	0.00	0.00	2.85
137	138	3.103911	CGGTGTCGACGTGGCTTC	61.104	66.667	11.62	0.00	39.00	3.86
138	139	3.553437	CTCGGTGTCGACGTGGCTT	62.553	63.158	11.62	0.00	40.88	4.35
139	140	4.039357	CTCGGTGTCGACGTGGCT	62.039	66.667	11.62	0.00	40.88	4.75
141	142	4.337060	TGCTCGGTGTCGACGTGG	62.337	66.667	11.62	0.00	40.88	4.94
142	143	3.097728	GTGCTCGGTGTCGACGTG	61.098	66.667	11.62	3.01	40.88	4.49
143	144	4.678269	CGTGCTCGGTGTCGACGT	62.678	66.667	11.62	0.00	40.88	4.34
144	145	4.678269	ACGTGCTCGGTGTCGACG	62.678	66.667	11.62	0.00	40.88	5.12
145	146	2.799916	GACGTGCTCGGTGTCGAC	60.800	66.667	9.11	9.11	40.88	4.20
146	147	2.976350	AGACGTGCTCGGTGTCGA	60.976	61.111	13.32	0.00	43.86	4.20
147	148	2.801162	CAGACGTGCTCGGTGTCG	60.801	66.667	13.32	0.00	41.85	4.35
160	161	1.805945	GGTCGACATGGACGCAGAC	60.806	63.158	18.91	3.86	37.82	3.51
161	162	2.571757	GGTCGACATGGACGCAGA	59.428	61.111	18.91	0.00	37.82	4.26
162	163	2.509336	GGGTCGACATGGACGCAG	60.509	66.667	18.91	0.00	45.93	5.18
165	166	4.508128	CCGGGGTCGACATGGACG	62.508	72.222	18.91	12.88	37.82	4.79
166	167	4.832608	GCCGGGGTCGACATGGAC	62.833	72.222	18.91	8.00	39.00	4.02
169	170	4.838152	CTGGCCGGGGTCGACATG	62.838	72.222	18.91	5.91	39.00	3.21
182	183	4.767255	CTCTGGCGTGGGACTGGC	62.767	72.222	0.00	0.00	0.00	4.85
183	184	4.087892	CCTCTGGCGTGGGACTGG	62.088	72.222	0.00	0.00	0.00	4.00
184	185	2.997315	TCCTCTGGCGTGGGACTG	60.997	66.667	0.00	0.00	0.00	3.51
185	186	2.681778	CTCCTCTGGCGTGGGACT	60.682	66.667	0.00	0.00	0.00	3.85
186	187	4.459089	GCTCCTCTGGCGTGGGAC	62.459	72.222	0.00	0.00	0.00	4.46
194	195	3.259633	AAACAGCGGGCTCCTCTGG	62.260	63.158	13.56	0.00	32.42	3.86
195	196	2.037136	CAAACAGCGGGCTCCTCTG	61.037	63.158	9.00	9.00	0.00	3.35
196	197	1.557269	ATCAAACAGCGGGCTCCTCT	61.557	55.000	0.00	0.00	0.00	3.69
197	198	1.078143	ATCAAACAGCGGGCTCCTC	60.078	57.895	0.00	0.00	0.00	3.71
198	199	1.377725	CATCAAACAGCGGGCTCCT	60.378	57.895	0.00	0.00	0.00	3.69
199	200	1.675641	ACATCAAACAGCGGGCTCC	60.676	57.895	0.00	0.00	0.00	4.70
200	201	1.503542	CACATCAAACAGCGGGCTC	59.496	57.895	0.00	0.00	0.00	4.70
201	202	2.629656	GCACATCAAACAGCGGGCT	61.630	57.895	0.00	0.00	0.00	5.19
202	203	2.126346	GCACATCAAACAGCGGGC	60.126	61.111	0.00	0.00	0.00	6.13
203	204	0.109597	GAAGCACATCAAACAGCGGG	60.110	55.000	0.00	0.00	0.00	6.13
204	205	0.453282	CGAAGCACATCAAACAGCGG	60.453	55.000	0.00	0.00	0.00	5.52
205	206	0.235665	ACGAAGCACATCAAACAGCG	59.764	50.000	0.00	0.00	0.00	5.18
206	207	1.002468	ACACGAAGCACATCAAACAGC	60.002	47.619	0.00	0.00	0.00	4.40
207	208	2.545526	AGACACGAAGCACATCAAACAG	59.454	45.455	0.00	0.00	0.00	3.16
208	209	2.560504	AGACACGAAGCACATCAAACA	58.439	42.857	0.00	0.00	0.00	2.83
209	210	4.641954	CATAGACACGAAGCACATCAAAC	58.358	43.478	0.00	0.00	0.00	2.93
210	211	3.125146	GCATAGACACGAAGCACATCAAA	59.875	43.478	0.00	0.00	0.00	2.69
211	212	2.672874	GCATAGACACGAAGCACATCAA	59.327	45.455	0.00	0.00	0.00	2.57
212	213	2.094026	AGCATAGACACGAAGCACATCA	60.094	45.455	0.00	0.00	0.00	3.07
213	214	2.544685	AGCATAGACACGAAGCACATC	58.455	47.619	0.00	0.00	0.00	3.06
214	215	2.680312	AGCATAGACACGAAGCACAT	57.320	45.000	0.00	0.00	0.00	3.21
215	216	2.337583	GAAGCATAGACACGAAGCACA	58.662	47.619	0.00	0.00	0.00	4.57
216	217	1.661112	GGAAGCATAGACACGAAGCAC	59.339	52.381	0.00	0.00	0.00	4.40
217	218	1.550524	AGGAAGCATAGACACGAAGCA	59.449	47.619	0.00	0.00	0.00	3.91
218	219	2.301577	AGGAAGCATAGACACGAAGC	57.698	50.000	0.00	0.00	0.00	3.86
219	220	3.118956	AGGAAGGAAGCATAGACACGAAG	60.119	47.826	0.00	0.00	0.00	3.79
220	221	2.832129	AGGAAGGAAGCATAGACACGAA	59.168	45.455	0.00	0.00	0.00	3.85
221	222	2.457598	AGGAAGGAAGCATAGACACGA	58.542	47.619	0.00	0.00	0.00	4.35
222	223	2.969628	AGGAAGGAAGCATAGACACG	57.030	50.000	0.00	0.00	0.00	4.49
223	224	5.003804	TCAAAAGGAAGGAAGCATAGACAC	58.996	41.667	0.00	0.00	0.00	3.67
224	225	5.241403	TCAAAAGGAAGGAAGCATAGACA	57.759	39.130	0.00	0.00	0.00	3.41
225	226	5.007136	CGATCAAAAGGAAGGAAGCATAGAC	59.993	44.000	0.00	0.00	0.00	2.59
226	227	5.118990	CGATCAAAAGGAAGGAAGCATAGA	58.881	41.667	0.00	0.00	0.00	1.98
227	228	4.878397	ACGATCAAAAGGAAGGAAGCATAG	59.122	41.667	0.00	0.00	0.00	2.23
228	229	4.843728	ACGATCAAAAGGAAGGAAGCATA	58.156	39.130	0.00	0.00	0.00	3.14
229	230	3.690460	ACGATCAAAAGGAAGGAAGCAT	58.310	40.909	0.00	0.00	0.00	3.79
230	231	3.074412	GACGATCAAAAGGAAGGAAGCA	58.926	45.455	0.00	0.00	0.00	3.91
231	232	2.094417	CGACGATCAAAAGGAAGGAAGC	59.906	50.000	0.00	0.00	0.00	3.86
232	233	3.585862	TCGACGATCAAAAGGAAGGAAG	58.414	45.455	0.00	0.00	0.00	3.46
233	234	3.671008	TCGACGATCAAAAGGAAGGAA	57.329	42.857	0.00	0.00	0.00	3.36
234	235	3.006537	AGTTCGACGATCAAAAGGAAGGA	59.993	43.478	8.53	0.00	0.00	3.36
235	236	3.326747	AGTTCGACGATCAAAAGGAAGG	58.673	45.455	8.53	0.00	0.00	3.46
236	237	4.992381	AAGTTCGACGATCAAAAGGAAG	57.008	40.909	8.53	0.00	0.00	3.46
237	238	5.504994	CCAAAAGTTCGACGATCAAAAGGAA	60.505	40.000	8.53	0.00	0.00	3.36
238	239	4.024387	CCAAAAGTTCGACGATCAAAAGGA	60.024	41.667	8.53	0.00	0.00	3.36
239	240	4.219033	CCAAAAGTTCGACGATCAAAAGG	58.781	43.478	8.53	0.00	0.00	3.11
240	241	4.219033	CCCAAAAGTTCGACGATCAAAAG	58.781	43.478	8.53	0.00	0.00	2.27
241	242	3.549221	GCCCAAAAGTTCGACGATCAAAA	60.549	43.478	8.53	0.00	0.00	2.44
242	243	2.031508	GCCCAAAAGTTCGACGATCAAA	60.032	45.455	8.53	0.00	0.00	2.69
243	244	1.533731	GCCCAAAAGTTCGACGATCAA	59.466	47.619	8.53	0.00	0.00	2.57
244	245	1.153353	GCCCAAAAGTTCGACGATCA	58.847	50.000	8.53	0.00	0.00	2.92
245	246	1.153353	TGCCCAAAAGTTCGACGATC	58.847	50.000	0.00	0.00	0.00	3.69
246	247	1.468520	CATGCCCAAAAGTTCGACGAT	59.531	47.619	0.00	0.00	0.00	3.73
247	248	0.871722	CATGCCCAAAAGTTCGACGA	59.128	50.000	0.00	0.00	0.00	4.20
248	249	0.591170	ACATGCCCAAAAGTTCGACG	59.409	50.000	0.00	0.00	0.00	5.12
249	250	2.793278	AACATGCCCAAAAGTTCGAC	57.207	45.000	0.00	0.00	0.00	4.20
250	251	2.690497	TCAAACATGCCCAAAAGTTCGA	59.310	40.909	0.00	0.00	0.00	3.71
251	252	3.090952	TCAAACATGCCCAAAAGTTCG	57.909	42.857	0.00	0.00	0.00	3.95
252	253	3.674753	CGATCAAACATGCCCAAAAGTTC	59.325	43.478	0.00	0.00	0.00	3.01
253	254	3.652274	CGATCAAACATGCCCAAAAGTT	58.348	40.909	0.00	0.00	0.00	2.66
254	255	2.610232	GCGATCAAACATGCCCAAAAGT	60.610	45.455	0.00	0.00	0.00	2.66
255	256	1.994779	GCGATCAAACATGCCCAAAAG	59.005	47.619	0.00	0.00	0.00	2.27
256	257	1.337635	GGCGATCAAACATGCCCAAAA	60.338	47.619	0.00	0.00	41.70	2.44
257	258	0.246086	GGCGATCAAACATGCCCAAA	59.754	50.000	0.00	0.00	41.70	3.28
258	259	1.889454	GGCGATCAAACATGCCCAA	59.111	52.632	0.00	0.00	41.70	4.12
259	260	2.405805	CGGCGATCAAACATGCCCA	61.406	57.895	0.00	0.00	44.71	5.36
260	261	1.653094	TTCGGCGATCAAACATGCCC	61.653	55.000	11.76	0.00	44.71	5.36
261	262	0.248215	CTTCGGCGATCAAACATGCC	60.248	55.000	11.76	0.00	44.09	4.40
262	263	0.447801	ACTTCGGCGATCAAACATGC	59.552	50.000	11.76	0.00	0.00	4.06
263	264	1.464608	ACACTTCGGCGATCAAACATG	59.535	47.619	11.76	4.30	0.00	3.21
264	265	1.464608	CACACTTCGGCGATCAAACAT	59.535	47.619	11.76	0.00	0.00	2.71
265	266	0.865111	CACACTTCGGCGATCAAACA	59.135	50.000	11.76	0.00	0.00	2.83
266	267	0.165944	CCACACTTCGGCGATCAAAC	59.834	55.000	11.76	0.00	0.00	2.93
267	268	1.573829	GCCACACTTCGGCGATCAAA	61.574	55.000	11.76	0.00	40.35	2.69
268	269	2.032634	GCCACACTTCGGCGATCAA	61.033	57.895	11.76	0.00	40.35	2.57
269	270	2.434185	GCCACACTTCGGCGATCA	60.434	61.111	11.76	0.00	40.35	2.92
275	276	1.671979	ATCATCATGCCACACTTCGG	58.328	50.000	0.00	0.00	0.00	4.30
276	277	3.002656	GGTAATCATCATGCCACACTTCG	59.997	47.826	0.00	0.00	0.00	3.79
277	278	3.002656	CGGTAATCATCATGCCACACTTC	59.997	47.826	0.00	0.00	0.00	3.01
278	279	2.945008	CGGTAATCATCATGCCACACTT	59.055	45.455	0.00	0.00	0.00	3.16
279	280	2.170397	TCGGTAATCATCATGCCACACT	59.830	45.455	0.00	0.00	0.00	3.55
280	281	2.287915	GTCGGTAATCATCATGCCACAC	59.712	50.000	0.00	0.00	0.00	3.82
281	282	2.170397	AGTCGGTAATCATCATGCCACA	59.830	45.455	0.00	0.00	0.00	4.17
282	283	2.838736	AGTCGGTAATCATCATGCCAC	58.161	47.619	0.00	0.00	0.00	5.01
283	284	3.205338	CAAGTCGGTAATCATCATGCCA	58.795	45.455	0.00	0.00	0.00	4.92
284	285	3.206150	ACAAGTCGGTAATCATCATGCC	58.794	45.455	0.00	0.00	0.00	4.40
285	286	5.293324	TGTTACAAGTCGGTAATCATCATGC	59.707	40.000	0.00	0.00	35.83	4.06
286	287	6.902224	TGTTACAAGTCGGTAATCATCATG	57.098	37.500	0.00	0.00	35.83	3.07
287	288	6.483307	CCATGTTACAAGTCGGTAATCATCAT	59.517	38.462	0.00	0.00	35.83	2.45
288	289	5.815222	CCATGTTACAAGTCGGTAATCATCA	59.185	40.000	0.00	0.00	35.83	3.07
289	290	5.815740	ACCATGTTACAAGTCGGTAATCATC	59.184	40.000	0.00	0.00	35.83	2.92
290	291	5.584649	CACCATGTTACAAGTCGGTAATCAT	59.415	40.000	0.00	0.00	35.83	2.45
291	292	4.932799	CACCATGTTACAAGTCGGTAATCA	59.067	41.667	0.00	0.00	35.83	2.57
292	293	5.172934	TCACCATGTTACAAGTCGGTAATC	58.827	41.667	0.00	0.00	35.83	1.75
293	294	5.155278	TCACCATGTTACAAGTCGGTAAT	57.845	39.130	0.00	0.00	35.83	1.89
294	295	4.603989	TCACCATGTTACAAGTCGGTAA	57.396	40.909	0.00	0.00	0.00	2.85
295	296	4.221041	TGATCACCATGTTACAAGTCGGTA	59.779	41.667	0.00	0.00	0.00	4.02
296	297	3.007506	TGATCACCATGTTACAAGTCGGT	59.992	43.478	0.00	0.00	0.00	4.69
297	298	3.595173	TGATCACCATGTTACAAGTCGG	58.405	45.455	0.00	0.00	0.00	4.79
298	299	4.869861	TGATGATCACCATGTTACAAGTCG	59.130	41.667	0.00	0.00	35.17	4.18
299	300	6.741992	TTGATGATCACCATGTTACAAGTC	57.258	37.500	0.00	0.00	35.17	3.01
300	301	6.716628	AGTTTGATGATCACCATGTTACAAGT	59.283	34.615	0.00	0.00	35.17	3.16
301	302	7.149569	AGTTTGATGATCACCATGTTACAAG	57.850	36.000	0.00	0.00	35.17	3.16
302	303	7.014134	ACAAGTTTGATGATCACCATGTTACAA	59.986	33.333	0.00	0.00	35.17	2.41
303	304	6.489700	ACAAGTTTGATGATCACCATGTTACA	59.510	34.615	0.00	0.00	35.17	2.41
304	305	6.803320	CACAAGTTTGATGATCACCATGTTAC	59.197	38.462	0.00	0.00	35.17	2.50
305	306	6.072008	CCACAAGTTTGATGATCACCATGTTA	60.072	38.462	0.00	0.00	35.17	2.41
306	307	5.279106	CCACAAGTTTGATGATCACCATGTT	60.279	40.000	0.00	0.00	35.17	2.71
307	308	4.219070	CCACAAGTTTGATGATCACCATGT	59.781	41.667	0.00	0.00	35.17	3.21
308	309	4.740268	CCACAAGTTTGATGATCACCATG	58.260	43.478	0.00	0.00	35.17	3.66
309	310	3.194116	GCCACAAGTTTGATGATCACCAT	59.806	43.478	0.00	0.00	38.43	3.55
310	311	2.557924	GCCACAAGTTTGATGATCACCA	59.442	45.455	0.00	0.00	0.00	4.17
311	312	2.414559	CGCCACAAGTTTGATGATCACC	60.415	50.000	0.00	0.00	0.00	4.02
312	313	2.226437	ACGCCACAAGTTTGATGATCAC	59.774	45.455	0.00	0.00	0.00	3.06
313	314	2.503331	ACGCCACAAGTTTGATGATCA	58.497	42.857	0.00	0.00	0.00	2.92
314	315	3.559238	AACGCCACAAGTTTGATGATC	57.441	42.857	0.00	0.00	0.00	2.92
315	316	4.320608	AAAACGCCACAAGTTTGATGAT	57.679	36.364	0.00	0.00	41.10	2.45
316	317	3.791973	AAAACGCCACAAGTTTGATGA	57.208	38.095	0.00	0.00	41.10	2.92
334	335	4.825085	AGTTATCTTTCCCACTGCGAAAAA	59.175	37.500	0.00	0.00	0.00	1.94
335	336	4.394729	AGTTATCTTTCCCACTGCGAAAA	58.605	39.130	0.00	0.00	0.00	2.29
336	337	4.015872	AGTTATCTTTCCCACTGCGAAA	57.984	40.909	0.00	0.00	0.00	3.46
337	338	3.695830	AGTTATCTTTCCCACTGCGAA	57.304	42.857	0.00	0.00	0.00	4.70
338	339	3.695830	AAGTTATCTTTCCCACTGCGA	57.304	42.857	0.00	0.00	0.00	5.10
339	340	3.751175	TCAAAGTTATCTTTCCCACTGCG	59.249	43.478	0.00	0.00	41.31	5.18
340	341	5.904362	ATCAAAGTTATCTTTCCCACTGC	57.096	39.130	0.00	0.00	41.31	4.40
341	342	8.981647	CAAAAATCAAAGTTATCTTTCCCACTG	58.018	33.333	0.00	0.00	41.31	3.66
342	343	8.150296	CCAAAAATCAAAGTTATCTTTCCCACT	58.850	33.333	0.00	0.00	41.31	4.00
343	344	7.387673	CCCAAAAATCAAAGTTATCTTTCCCAC	59.612	37.037	0.00	0.00	41.31	4.61
344	345	7.449247	CCCAAAAATCAAAGTTATCTTTCCCA	58.551	34.615	0.00	0.00	41.31	4.37
345	346	6.371548	GCCCAAAAATCAAAGTTATCTTTCCC	59.628	38.462	0.00	0.00	41.31	3.97
346	347	6.090763	CGCCCAAAAATCAAAGTTATCTTTCC	59.909	38.462	0.00	0.00	41.31	3.13
347	348	6.645003	ACGCCCAAAAATCAAAGTTATCTTTC	59.355	34.615	0.00	0.00	41.31	2.62
348	349	6.521162	ACGCCCAAAAATCAAAGTTATCTTT	58.479	32.000	0.00	0.00	43.66	2.52
349	350	6.096673	ACGCCCAAAAATCAAAGTTATCTT	57.903	33.333	0.00	0.00	35.14	2.40
350	351	5.722021	ACGCCCAAAAATCAAAGTTATCT	57.278	34.783	0.00	0.00	0.00	1.98
351	352	6.475402	CCATACGCCCAAAAATCAAAGTTATC	59.525	38.462	0.00	0.00	0.00	1.75
352	353	6.153680	TCCATACGCCCAAAAATCAAAGTTAT	59.846	34.615	0.00	0.00	0.00	1.89
353	354	5.477291	TCCATACGCCCAAAAATCAAAGTTA	59.523	36.000	0.00	0.00	0.00	2.24
354	355	4.282195	TCCATACGCCCAAAAATCAAAGTT	59.718	37.500	0.00	0.00	0.00	2.66
355	356	3.829601	TCCATACGCCCAAAAATCAAAGT	59.170	39.130	0.00	0.00	0.00	2.66
356	357	4.423732	CTCCATACGCCCAAAAATCAAAG	58.576	43.478	0.00	0.00	0.00	2.77
357	358	3.194542	CCTCCATACGCCCAAAAATCAAA	59.805	43.478	0.00	0.00	0.00	2.69
358	359	2.757868	CCTCCATACGCCCAAAAATCAA	59.242	45.455	0.00	0.00	0.00	2.57
359	360	2.374184	CCTCCATACGCCCAAAAATCA	58.626	47.619	0.00	0.00	0.00	2.57
360	361	1.067060	GCCTCCATACGCCCAAAAATC	59.933	52.381	0.00	0.00	0.00	2.17
361	362	1.111277	GCCTCCATACGCCCAAAAAT	58.889	50.000	0.00	0.00	0.00	1.82
362	363	0.968393	GGCCTCCATACGCCCAAAAA	60.968	55.000	0.00	0.00	39.39	1.94
363	364	1.379309	GGCCTCCATACGCCCAAAA	60.379	57.895	0.00	0.00	39.39	2.44
364	365	2.274104	GGCCTCCATACGCCCAAA	59.726	61.111	0.00	0.00	39.39	3.28
365	366	4.169696	CGGCCTCCATACGCCCAA	62.170	66.667	0.00	0.00	42.53	4.12
367	368	2.676163	ATTTCGGCCTCCATACGCCC	62.676	60.000	0.00	0.00	42.53	6.13
368	369	1.227853	ATTTCGGCCTCCATACGCC	60.228	57.895	0.00	0.00	42.05	5.68
369	370	0.249911	AGATTTCGGCCTCCATACGC	60.250	55.000	0.00	0.00	0.00	4.42
370	371	1.502231	CAGATTTCGGCCTCCATACG	58.498	55.000	0.00	0.00	0.00	3.06
371	372	1.416401	TCCAGATTTCGGCCTCCATAC	59.584	52.381	0.00	0.00	0.00	2.39
372	373	1.801242	TCCAGATTTCGGCCTCCATA	58.199	50.000	0.00	0.00	0.00	2.74
373	374	0.918983	TTCCAGATTTCGGCCTCCAT	59.081	50.000	0.00	0.00	0.00	3.41
374	375	0.253044	CTTCCAGATTTCGGCCTCCA	59.747	55.000	0.00	0.00	0.00	3.86
375	376	1.098129	GCTTCCAGATTTCGGCCTCC	61.098	60.000	0.00	0.00	0.00	4.30
376	377	1.432270	CGCTTCCAGATTTCGGCCTC	61.432	60.000	0.00	0.00	0.00	4.70
377	378	1.450312	CGCTTCCAGATTTCGGCCT	60.450	57.895	0.00	0.00	0.00	5.19
378	379	3.102097	CGCTTCCAGATTTCGGCC	58.898	61.111	0.00	0.00	0.00	6.13
379	380	2.405191	GCGCTTCCAGATTTCGGC	59.595	61.111	0.00	0.00	0.00	5.54
380	381	2.703409	CGCGCTTCCAGATTTCGG	59.297	61.111	5.56	0.00	0.00	4.30
381	382	2.703409	CCGCGCTTCCAGATTTCG	59.297	61.111	5.56	0.00	0.00	3.46
382	383	2.109126	AGCCGCGCTTCCAGATTTC	61.109	57.895	5.56	0.00	33.89	2.17
383	384	2.045926	AGCCGCGCTTCCAGATTT	60.046	55.556	5.56	0.00	33.89	2.17
384	385	2.821366	CAGCCGCGCTTCCAGATT	60.821	61.111	5.56	0.00	36.40	2.40
385	386	4.845580	CCAGCCGCGCTTCCAGAT	62.846	66.667	5.56	0.00	36.40	2.90
388	389	4.634703	TTTCCAGCCGCGCTTCCA	62.635	61.111	5.56	0.00	36.40	3.53
389	390	4.103103	GTTTCCAGCCGCGCTTCC	62.103	66.667	5.56	0.00	36.40	3.46
390	391	3.028366	GAGTTTCCAGCCGCGCTTC	62.028	63.158	5.56	0.00	36.40	3.86
391	392	3.050275	GAGTTTCCAGCCGCGCTT	61.050	61.111	5.56	0.00	36.40	4.68
394	395	3.479269	GTCGAGTTTCCAGCCGCG	61.479	66.667	0.00	0.00	0.00	6.46
395	396	3.479269	CGTCGAGTTTCCAGCCGC	61.479	66.667	0.00	0.00	0.00	6.53
396	397	3.479269	GCGTCGAGTTTCCAGCCG	61.479	66.667	0.00	0.00	0.00	5.52
397	398	1.503818	TTTGCGTCGAGTTTCCAGCC	61.504	55.000	0.00	0.00	0.00	4.85
398	399	0.384353	GTTTGCGTCGAGTTTCCAGC	60.384	55.000	0.00	0.00	0.00	4.85
399	400	0.111266	CGTTTGCGTCGAGTTTCCAG	60.111	55.000	0.00	0.00	0.00	3.86
400	401	1.928653	CGTTTGCGTCGAGTTTCCA	59.071	52.632	0.00	0.00	0.00	3.53
401	402	1.438222	GCGTTTGCGTCGAGTTTCC	60.438	57.895	0.00	0.00	40.81	3.13
402	403	4.095355	GCGTTTGCGTCGAGTTTC	57.905	55.556	0.00	0.00	40.81	2.78
420	421	0.789383	CACTCGGCGAATGCGTTTTC	60.789	55.000	12.13	0.00	44.10	2.29
421	422	1.206578	CACTCGGCGAATGCGTTTT	59.793	52.632	12.13	0.00	44.10	2.43
422	423	2.860293	CACTCGGCGAATGCGTTT	59.140	55.556	12.13	0.00	44.10	3.60
423	424	3.788766	GCACTCGGCGAATGCGTT	61.789	61.111	27.63	0.00	44.10	4.84
441	442	4.660938	ACCCGTTCAGCCCCAAGC	62.661	66.667	0.00	0.00	44.25	4.01
442	443	2.672996	CACCCGTTCAGCCCCAAG	60.673	66.667	0.00	0.00	0.00	3.61
443	444	4.278513	CCACCCGTTCAGCCCCAA	62.279	66.667	0.00	0.00	0.00	4.12
445	446	4.410400	CTCCACCCGTTCAGCCCC	62.410	72.222	0.00	0.00	0.00	5.80
446	447	2.670148	ATCTCCACCCGTTCAGCCC	61.670	63.158	0.00	0.00	0.00	5.19
447	448	1.450312	CATCTCCACCCGTTCAGCC	60.450	63.158	0.00	0.00	0.00	4.85
448	449	2.109126	GCATCTCCACCCGTTCAGC	61.109	63.158	0.00	0.00	0.00	4.26
449	450	0.742281	CAGCATCTCCACCCGTTCAG	60.742	60.000	0.00	0.00	0.00	3.02
450	451	1.296392	CAGCATCTCCACCCGTTCA	59.704	57.895	0.00	0.00	0.00	3.18
451	452	0.535335	TACAGCATCTCCACCCGTTC	59.465	55.000	0.00	0.00	0.00	3.95
452	453	0.981183	TTACAGCATCTCCACCCGTT	59.019	50.000	0.00	0.00	0.00	4.44
453	454	0.981183	TTTACAGCATCTCCACCCGT	59.019	50.000	0.00	0.00	0.00	5.28
454	455	2.009774	CTTTTACAGCATCTCCACCCG	58.990	52.381	0.00	0.00	0.00	5.28
455	456	3.350219	TCTTTTACAGCATCTCCACCC	57.650	47.619	0.00	0.00	0.00	4.61
456	457	3.879892	GGATCTTTTACAGCATCTCCACC	59.120	47.826	0.00	0.00	0.00	4.61
457	458	3.879892	GGGATCTTTTACAGCATCTCCAC	59.120	47.826	0.00	0.00	0.00	4.02
458	459	3.523157	TGGGATCTTTTACAGCATCTCCA	59.477	43.478	0.00	0.00	0.00	3.86
459	460	4.133078	CTGGGATCTTTTACAGCATCTCC	58.867	47.826	0.00	0.00	0.00	3.71
460	461	4.133078	CCTGGGATCTTTTACAGCATCTC	58.867	47.826	0.00	0.00	0.00	2.75
461	462	3.117738	CCCTGGGATCTTTTACAGCATCT	60.118	47.826	7.01	0.00	0.00	2.90
462	463	3.117888	TCCCTGGGATCTTTTACAGCATC	60.118	47.826	12.53	0.00	0.00	3.91
463	464	2.852449	TCCCTGGGATCTTTTACAGCAT	59.148	45.455	12.53	0.00	0.00	3.79
464	465	2.274542	TCCCTGGGATCTTTTACAGCA	58.725	47.619	12.53	0.00	0.00	4.41
465	466	3.366052	TTCCCTGGGATCTTTTACAGC	57.634	47.619	17.93	0.00	0.00	4.40
466	467	4.646492	CCATTTCCCTGGGATCTTTTACAG	59.354	45.833	17.93	0.00	32.28	2.74
467	468	4.045334	ACCATTTCCCTGGGATCTTTTACA	59.955	41.667	17.93	0.00	40.85	2.41
468	469	4.610333	ACCATTTCCCTGGGATCTTTTAC	58.390	43.478	17.93	0.00	40.85	2.01
469	470	4.965283	ACCATTTCCCTGGGATCTTTTA	57.035	40.909	17.93	0.00	40.85	1.52
470	471	3.852858	ACCATTTCCCTGGGATCTTTT	57.147	42.857	17.93	0.00	40.85	2.27
471	472	3.852858	AACCATTTCCCTGGGATCTTT	57.147	42.857	17.93	3.13	40.85	2.52
472	473	3.371595	CGTAACCATTTCCCTGGGATCTT	60.372	47.826	17.93	6.23	40.85	2.40
473	474	2.172717	CGTAACCATTTCCCTGGGATCT	59.827	50.000	17.93	3.81	40.85	2.75
474	475	2.092592	ACGTAACCATTTCCCTGGGATC	60.093	50.000	17.93	0.00	40.85	3.36
475	476	1.920351	ACGTAACCATTTCCCTGGGAT	59.080	47.619	17.93	2.48	40.85	3.85
476	477	1.279846	GACGTAACCATTTCCCTGGGA	59.720	52.381	12.53	12.53	40.85	4.37
477	478	1.680860	GGACGTAACCATTTCCCTGGG	60.681	57.143	6.33	6.33	40.85	4.45
478	479	1.280998	AGGACGTAACCATTTCCCTGG	59.719	52.381	0.00	0.00	42.35	4.45
479	480	2.629051	GAGGACGTAACCATTTCCCTG	58.371	52.381	0.00	0.00	0.00	4.45
480	481	1.206371	CGAGGACGTAACCATTTCCCT	59.794	52.381	0.00	0.00	34.56	4.20
481	482	1.648504	CGAGGACGTAACCATTTCCC	58.351	55.000	0.00	0.00	34.56	3.97
482	483	1.004595	GCGAGGACGTAACCATTTCC	58.995	55.000	0.00	0.00	41.98	3.13
483	484	1.004595	GGCGAGGACGTAACCATTTC	58.995	55.000	0.00	0.00	41.98	2.17
484	485	0.738412	CGGCGAGGACGTAACCATTT	60.738	55.000	0.00	0.00	41.98	2.32
485	486	1.153706	CGGCGAGGACGTAACCATT	60.154	57.895	0.00	0.00	41.98	3.16
486	487	1.389609	ATCGGCGAGGACGTAACCAT	61.390	55.000	17.22	0.00	41.98	3.55
487	488	2.048023	ATCGGCGAGGACGTAACCA	61.048	57.895	17.22	0.00	41.98	3.67
488	489	1.588139	CATCGGCGAGGACGTAACC	60.588	63.158	17.69	0.00	41.98	2.85
489	490	2.228914	GCATCGGCGAGGACGTAAC	61.229	63.158	26.96	1.89	41.98	2.50
490	491	2.103538	GCATCGGCGAGGACGTAA	59.896	61.111	26.96	0.00	41.98	3.18
504	505	0.385974	GCTGTTTGTTTCGCTCGCAT	60.386	50.000	0.00	0.00	0.00	4.73
559	563	1.278985	CTGTCACTGTGGGGCTCAATA	59.721	52.381	8.11	0.00	0.00	1.90
560	564	0.037303	CTGTCACTGTGGGGCTCAAT	59.963	55.000	8.11	0.00	0.00	2.57
1031	1045	0.251832	AGTGCGAGAGGGAGAAAGGA	60.252	55.000	0.00	0.00	0.00	3.36
1070	1084	3.799420	CCTTCCTTCTTCTTATTCTCGCG	59.201	47.826	0.00	0.00	0.00	5.87
1081	1095	1.066071	CGGAACCCTCCTTCCTTCTTC	60.066	57.143	0.00	0.00	39.93	2.87
1082	1096	0.984995	CGGAACCCTCCTTCCTTCTT	59.015	55.000	0.00	0.00	39.93	2.52
1083	1097	0.178900	ACGGAACCCTCCTTCCTTCT	60.179	55.000	0.00	0.00	39.93	2.85
1084	1098	0.691332	AACGGAACCCTCCTTCCTTC	59.309	55.000	0.00	0.00	39.93	3.46
1241	1255	3.440415	GCCGCGGAAAAGAAGGGG	61.440	66.667	33.48	0.00	40.44	4.79
1261	1276	1.224592	GCATCCGTCCATTGGTCCT	59.775	57.895	1.86	0.00	0.00	3.85
1267	1282	1.377202	ACGCAAGCATCCGTCCATT	60.377	52.632	0.00	0.00	45.62	3.16
1269	1284	2.741985	CACGCAAGCATCCGTCCA	60.742	61.111	0.00	0.00	45.62	4.02
1304	1327	4.595538	AGCGCCACGAACACGGAA	62.596	61.111	2.29	0.00	0.00	4.30
1436	1459	1.896220	TCATTCACCCTGTCAGCAAC	58.104	50.000	0.00	0.00	0.00	4.17
1467	1490	1.151450	AAACCACAGGGCACTCAGG	59.849	57.895	1.62	1.62	37.90	3.86
1609	1633	6.851222	ACAGAAATTCAACCGCATATAGAG	57.149	37.500	0.00	0.00	0.00	2.43
1612	1636	7.860373	GCAAATACAGAAATTCAACCGCATATA	59.140	33.333	0.00	0.00	0.00	0.86
1633	1657	4.111916	CTCCAACAAACAAACGAGCAAAT	58.888	39.130	0.00	0.00	0.00	2.32
1706	1730	1.064463	AGGGTTAGGCATGTCACATGG	60.064	52.381	19.59	1.54	0.00	3.66
1787	1811	5.540719	ACTCAGAAAGTAGCCCTCATATACC	59.459	44.000	0.00	0.00	36.07	2.73
1862	1886	7.435192	CACTACGAGTACAGAATGCATAATTCA	59.565	37.037	0.00	0.00	46.21	2.57
1870	1894	3.152261	AGCACTACGAGTACAGAATGC	57.848	47.619	0.00	0.00	42.53	3.56
1964	1988	1.455383	CCACAGCCACAAGGTCCAAC	61.455	60.000	0.00	0.00	37.19	3.77
1965	1989	1.152777	CCACAGCCACAAGGTCCAA	60.153	57.895	0.00	0.00	37.19	3.53
1966	1990	2.382770	ACCACAGCCACAAGGTCCA	61.383	57.895	0.00	0.00	37.19	4.02
1967	1991	1.898574	CACCACAGCCACAAGGTCC	60.899	63.158	0.00	0.00	37.19	4.46
1968	1992	1.898574	CCACCACAGCCACAAGGTC	60.899	63.158	0.00	0.00	37.19	3.85
1969	1993	2.195683	CCACCACAGCCACAAGGT	59.804	61.111	0.00	0.00	37.19	3.50
1970	1994	1.042559	AAACCACCACAGCCACAAGG	61.043	55.000	0.00	0.00	38.23	3.61
1971	1995	0.102844	CAAACCACCACAGCCACAAG	59.897	55.000	0.00	0.00	0.00	3.16
1972	1996	1.954362	GCAAACCACCACAGCCACAA	61.954	55.000	0.00	0.00	0.00	3.33
1973	1997	2.422231	GCAAACCACCACAGCCACA	61.422	57.895	0.00	0.00	0.00	4.17
1974	1998	1.675720	AAGCAAACCACCACAGCCAC	61.676	55.000	0.00	0.00	0.00	5.01
1975	1999	0.975040	AAAGCAAACCACCACAGCCA	60.975	50.000	0.00	0.00	0.00	4.75
1976	2000	1.036707	TAAAGCAAACCACCACAGCC	58.963	50.000	0.00	0.00	0.00	4.85
1977	2001	4.718940	ATATAAAGCAAACCACCACAGC	57.281	40.909	0.00	0.00	0.00	4.40
1978	2002	9.950680	CTTTATATATAAAGCAAACCACCACAG	57.049	33.333	25.10	4.97	41.69	3.66
1991	2015	6.806739	GCTTTTGCCCCGCTTTATATATAAAG	59.193	38.462	29.34	29.34	43.97	1.85
1992	2016	6.683715	GCTTTTGCCCCGCTTTATATATAAA	58.316	36.000	15.47	15.47	40.15	1.40
1993	2017	6.262193	GCTTTTGCCCCGCTTTATATATAA	57.738	37.500	0.81	0.81	40.15	0.98
1994	2018	5.890424	GCTTTTGCCCCGCTTTATATATA	57.110	39.130	0.00	0.00	40.15	0.86
1995	2019	4.783764	GCTTTTGCCCCGCTTTATATAT	57.216	40.909	0.00	0.00	40.15	0.86
2009	2033	3.713288	AGTTACCGAAAAAGGCTTTTGC	58.287	40.909	24.73	21.78	46.64	3.68
2010	2034	4.976116	CAGAGTTACCGAAAAAGGCTTTTG	59.024	41.667	24.73	15.11	34.83	2.44
2011	2035	4.643334	ACAGAGTTACCGAAAAAGGCTTTT	59.357	37.500	19.14	19.14	37.46	2.27
2012	2036	4.204799	ACAGAGTTACCGAAAAAGGCTTT	58.795	39.130	6.68	6.68	33.69	3.51
2013	2037	3.816994	ACAGAGTTACCGAAAAAGGCTT	58.183	40.909	0.00	0.00	33.69	4.35
2014	2038	3.487120	ACAGAGTTACCGAAAAAGGCT	57.513	42.857	0.00	0.00	33.69	4.58
2015	2039	4.563337	AAACAGAGTTACCGAAAAAGGC	57.437	40.909	0.00	0.00	33.69	4.35
2016	2040	7.645402	ACATTAAACAGAGTTACCGAAAAAGG	58.355	34.615	0.00	0.00	37.30	3.11
2020	2044	8.723311	CCATAACATTAAACAGAGTTACCGAAA	58.277	33.333	0.00	0.00	30.19	3.46
2021	2045	7.879160	ACCATAACATTAAACAGAGTTACCGAA	59.121	33.333	0.00	0.00	30.19	4.30
2022	2046	7.388437	ACCATAACATTAAACAGAGTTACCGA	58.612	34.615	0.00	0.00	30.19	4.69
2023	2047	7.605410	ACCATAACATTAAACAGAGTTACCG	57.395	36.000	0.00	0.00	30.19	4.02
2024	2048	9.005777	TGAACCATAACATTAAACAGAGTTACC	57.994	33.333	0.00	0.00	30.19	2.85
2064	2088	0.116143	CTCCTCCTGGCCTAGGCTAT	59.884	60.000	32.18	0.00	46.87	2.97
2096	2120	1.419381	TATCTTCCTGCGCATACCCA	58.581	50.000	12.24	0.00	0.00	4.51
2117	2161	3.157881	TCTGCTGTATATCTTCTCCCCG	58.842	50.000	0.00	0.00	0.00	5.73
2130	2174	4.651045	TCCAGAAGCTATCAATCTGCTGTA	59.349	41.667	6.81	0.00	39.36	2.74
2177	2221	4.613437	AGGAGGCAATCACATTGGTTTAT	58.387	39.130	0.00	0.00	40.57	1.40
2178	2222	4.046286	AGGAGGCAATCACATTGGTTTA	57.954	40.909	0.00	0.00	40.57	2.01
2186	2230	5.132502	CCATTATACAAGGAGGCAATCACA	58.867	41.667	0.00	0.00	0.00	3.58
2258	2302	5.692115	TGAGTATGTATTGGGCAAGAGAA	57.308	39.130	0.00	0.00	0.00	2.87
2402	2447	8.176814	TGTAGTAAATACAACTTACATCACGC	57.823	34.615	0.00	0.00	41.49	5.34
2527	2572	8.835734	TGCAGGATATAACATTACCTAATCCAT	58.164	33.333	0.00	0.00	35.02	3.41
2597	2642	0.806868	AATGATGTTGCTGCCACTCG	59.193	50.000	5.42	0.00	0.00	4.18
2616	2661	1.691196	CAAAGAACTTGGGCAGGACA	58.309	50.000	0.00	0.00	0.00	4.02
2826	2872	6.749139	TCCCTGATTTCTGACTGTAATATCG	58.251	40.000	0.00	0.00	0.00	2.92
2828	2874	8.717717	TGATTCCCTGATTTCTGACTGTAATAT	58.282	33.333	0.00	0.00	0.00	1.28
3170	3219	6.654582	TGCAGTGCTAAGTAAATTCAGAATCA	59.345	34.615	17.60	0.00	0.00	2.57
3570	3619	1.135257	CAGAGGACCAGTCACGTGATC	60.135	57.143	23.12	14.74	0.00	2.92
3580	3629	1.079266	GTGCTGCTCAGAGGACCAG	60.079	63.158	0.00	0.00	31.19	4.00
3827	3876	8.557864	CGAAATAAGAAGAGAATTGCTCATGAT	58.442	33.333	0.00	0.00	46.45	2.45
4223	4643	3.583086	ACTAGCACCAATACTCCAGTTGT	59.417	43.478	0.00	0.00	0.00	3.32
4369	4789	5.897377	AAACACTTAGCACTTTCAACAGT	57.103	34.783	0.00	0.00	0.00	3.55
4595	5023	7.639945	AGTTGAAATATAAGCTAATCGGCAAC	58.360	34.615	0.00	0.00	34.17	4.17
4629	5057	8.698973	TTTCCACAAAATATTTGAGTGAGGTA	57.301	30.769	24.61	10.83	32.18	3.08
4707	5135	7.329226	ACAGTTGTTTGCTCAATATTTACATGC	59.671	33.333	0.00	0.00	0.00	4.06
4803	5232	8.924511	ATTCAGAGAAAAACCAAGTAATCAGA	57.075	30.769	0.00	0.00	0.00	3.27
4895	5324	9.743057	TCAAATTGACAAAATGGTACTTAGTTG	57.257	29.630	0.00	0.00	0.00	3.16
5180	5609	2.021457	ACAACCACCTTCACTTTTCCG	58.979	47.619	0.00	0.00	0.00	4.30
5290	5721	3.261580	CAAGTCATACCAACGATCAGCA	58.738	45.455	0.00	0.00	0.00	4.41
5394	5825	9.368416	ACATCTATCTACTATAACCATGTGTGT	57.632	33.333	0.00	0.00	0.00	3.72
5418	5849	5.528690	GCTGATGCAGAAAAGGTCATATACA	59.471	40.000	0.00	0.00	39.41	2.29
5423	5854	2.799017	TGCTGATGCAGAAAAGGTCAT	58.201	42.857	0.00	0.00	45.31	3.06
5424	5855	2.275134	TGCTGATGCAGAAAAGGTCA	57.725	45.000	0.00	0.00	45.31	4.02
5761	6192	9.166173	CCTATTTGTTCTCATTGTGTTATCAGA	57.834	33.333	0.00	0.00	0.00	3.27
5904	6335	4.457257	GCTCTACTTGGATGAAAAGCACTT	59.543	41.667	0.00	0.00	0.00	3.16
5934	6365	3.723172	CCATCGATGTTGGCGGAG	58.277	61.111	23.27	2.28	0.00	4.63
6078	6509	2.767960	TGATCTAGACAGCTGAATGCCA	59.232	45.455	23.35	6.32	44.23	4.92
6114	6545	1.699656	CTTCACCGCCTGATGCTTCG	61.700	60.000	0.00	0.00	38.05	3.79
6141	6572	0.673985	CTATCCTTGACGGGATGCGA	59.326	55.000	6.30	0.00	44.85	5.10
6236	6667	5.753721	AGTCTAAGGCAATCTGTTCTTCT	57.246	39.130	0.00	0.00	0.00	2.85
6305	6736	3.117794	CGTCAAACAAGTTAGGACACGA	58.882	45.455	14.15	0.00	31.43	4.35
6384	6815	5.803237	ATTCTACATTCCCTACCTTACCG	57.197	43.478	0.00	0.00	0.00	4.02
6422	6853	1.071385	AGCTACAAGCACTTGAGCACT	59.929	47.619	23.94	12.46	45.56	4.40
6424	6855	2.260844	AAGCTACAAGCACTTGAGCA	57.739	45.000	23.94	9.32	45.56	4.26
6536	6969	5.932303	GTCAACTTCAGCAATGGTTACTCTA	59.068	40.000	0.00	0.00	0.00	2.43
6541	6974	4.278170	CCAAGTCAACTTCAGCAATGGTTA	59.722	41.667	0.00	0.00	33.11	2.85
6545	6978	3.996150	ACCAAGTCAACTTCAGCAATG	57.004	42.857	0.00	0.00	33.11	2.82
6554	6987	2.551071	GCAGGAAGCTACCAAGTCAACT	60.551	50.000	0.00	0.00	41.15	3.16
6590	7023	5.132897	TGACAACTATGCCATTGTTTTCC	57.867	39.130	13.13	3.23	39.13	3.13
6601	7035	2.678336	GCACCCTAGTTGACAACTATGC	59.322	50.000	25.35	25.35	42.69	3.14
6610	7044	2.781681	GCTTAAGGCACCCTAGTTGA	57.218	50.000	4.29	0.00	41.35	3.18
6622	7056	8.504005	CCGTACCATTTCTTATAATGCTTAAGG	58.496	37.037	4.29	0.00	34.81	2.69
6627	7061	4.760204	GGCCGTACCATTTCTTATAATGCT	59.240	41.667	0.00	0.00	38.86	3.79
6634	7068	2.008045	GCACGGCCGTACCATTTCTTA	61.008	52.381	33.70	0.00	39.03	2.10
6635	7069	1.303091	GCACGGCCGTACCATTTCTT	61.303	55.000	33.70	0.00	39.03	2.52
6643	7077	1.421410	CTGAATCTGCACGGCCGTAC	61.421	60.000	33.70	27.51	0.00	3.67
6665	7099	5.311265	TGGGCTGCTAAATATGATTCAGAG	58.689	41.667	0.00	0.00	0.00	3.35
6749	7184	0.042448	GTCGGACACGTTTGACTTGC	60.042	55.000	2.62	0.00	41.85	4.01
6905	7340	1.610038	CTGACCAATCACAAGCTTGCA	59.390	47.619	26.27	13.61	0.00	4.08
6958	7518	3.324846	GCCTGAAAACCCCTCATTTTCTT	59.675	43.478	10.56	0.00	43.47	2.52
6959	7519	2.899900	GCCTGAAAACCCCTCATTTTCT	59.100	45.455	10.56	0.00	43.47	2.52
6971	7548	6.398918	TGTATCAGAGAGTTAGCCTGAAAAC	58.601	40.000	0.00	0.00	39.94	2.43
6986	7563	7.816513	TCACTGAACTGAAGAAATGTATCAGAG	59.183	37.037	8.84	0.00	42.48	3.35
6988	7565	7.895975	TCACTGAACTGAAGAAATGTATCAG	57.104	36.000	0.00	0.00	44.77	2.90
6994	7571	6.698329	TGCAATTTCACTGAACTGAAGAAATG	59.302	34.615	0.00	0.00	38.50	2.32
7078	7655	9.366216	GACTGTAAAACATTTGAATAATTCCCC	57.634	33.333	0.00	0.00	0.00	4.81
7127	7708	3.782244	GCTTCGCACCGACAGCTG	61.782	66.667	13.48	13.48	37.20	4.24
7150	7731	1.373497	GTGTCTGCCACCTGTCGAG	60.373	63.158	0.00	0.00	38.18	4.04
7163	7744	2.072298	GCAAGATTCAGCTTCGTGTCT	58.928	47.619	2.50	0.00	0.00	3.41
7188	7769	3.225104	AGCAGAGAACCAAATGAAGCAA	58.775	40.909	0.00	0.00	0.00	3.91
7273	7854	9.193133	CGGTATATTGACTTCCATTTAGTACTG	57.807	37.037	5.39	0.00	0.00	2.74
7305	7886	6.394345	ACTCCTTTTCCAACCTTAGATCAT	57.606	37.500	0.00	0.00	0.00	2.45
7365	7946	0.179108	ATGCTTTCTCGAGGCGGTAC	60.179	55.000	13.56	0.00	0.00	3.34

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.