Multiple sequence alignment - TraesCS2A01G179400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G179400 chr2A 100.000 7881 0 0 1 7881 138115383 138107503 0.000000e+00 14554.0
1 TraesCS2A01G179400 chr2A 80.756 291 38 13 697 971 650659554 650659842 2.230000e-50 211.0
2 TraesCS2A01G179400 chr2B 94.546 3612 148 26 3641 7241 184959155 184955582 0.000000e+00 5533.0
3 TraesCS2A01G179400 chr2B 93.373 830 45 4 2818 3644 184960057 184959235 0.000000e+00 1219.0
4 TraesCS2A01G179400 chr2B 95.584 634 23 2 979 1608 184961181 184960549 0.000000e+00 1011.0
5 TraesCS2A01G179400 chr2B 93.308 523 24 7 178 690 184962068 184961547 0.000000e+00 761.0
6 TraesCS2A01G179400 chr2B 94.471 416 22 1 1610 2024 184960464 184960049 2.400000e-179 640.0
7 TraesCS2A01G179400 chr2B 81.208 298 39 10 701 982 584468834 584468538 2.860000e-54 224.0
8 TraesCS2A01G179400 chr2D 96.063 2210 65 12 3784 5989 131374215 131372024 0.000000e+00 3579.0
9 TraesCS2A01G179400 chr2D 93.780 1029 54 8 5990 7011 131367223 131366198 0.000000e+00 1537.0
10 TraesCS2A01G179400 chr2D 92.605 906 55 7 2818 3715 131375247 131374346 0.000000e+00 1291.0
11 TraesCS2A01G179400 chr2D 87.926 323 19 8 7022 7333 131366115 131365802 5.810000e-96 363.0
12 TraesCS2A01G179400 chr2D 90.323 279 17 6 1152 1420 131376236 131375958 2.700000e-94 357.0
13 TraesCS2A01G179400 chr2D 78.159 641 81 24 3 605 131381236 131380617 3.500000e-93 353.0
14 TraesCS2A01G179400 chr2D 82.878 403 52 5 1428 1827 131375857 131375469 5.850000e-91 346.0
15 TraesCS2A01G179400 chr2D 87.783 221 25 2 7400 7619 450570784 450570565 2.820000e-64 257.0
16 TraesCS2A01G179400 chr2D 91.099 191 13 4 1834 2022 131375429 131375241 1.010000e-63 255.0
17 TraesCS2A01G179400 chr2D 80.743 296 36 15 698 977 186777548 186777258 2.230000e-50 211.0
18 TraesCS2A01G179400 chr2D 81.481 243 32 9 7650 7881 450569725 450569965 3.750000e-43 187.0
19 TraesCS2A01G179400 chr2D 92.537 67 3 1 3716 3782 131374313 131374249 2.340000e-15 95.3
20 TraesCS2A01G179400 chr5A 95.012 802 28 8 2023 2817 676953918 676953122 0.000000e+00 1249.0
21 TraesCS2A01G179400 chr5A 93.797 806 31 11 2021 2817 49938489 49939284 0.000000e+00 1194.0
22 TraesCS2A01G179400 chr5A 89.873 237 20 3 7649 7881 638643722 638643958 1.290000e-77 302.0
23 TraesCS2A01G179400 chr5A 88.940 217 23 1 7404 7620 594972999 594973214 4.690000e-67 267.0
24 TraesCS2A01G179400 chr5A 81.597 288 36 10 702 976 452518561 452518278 1.030000e-53 222.0
25 TraesCS2A01G179400 chr5A 86.070 201 20 7 3795 3990 264586671 264586474 8.010000e-50 209.0
26 TraesCS2A01G179400 chr5A 87.200 125 16 0 2984 3108 264587699 264587575 8.240000e-30 143.0
27 TraesCS2A01G179400 chr6A 94.507 801 33 7 2023 2817 514030587 514031382 0.000000e+00 1225.0
28 TraesCS2A01G179400 chr6A 94.250 800 32 9 2023 2817 544634322 544635112 0.000000e+00 1210.0
29 TraesCS2A01G179400 chr6A 93.601 797 37 12 2025 2817 606447715 606446929 0.000000e+00 1177.0
30 TraesCS2A01G179400 chr6A 93.201 809 33 16 2025 2822 122423345 122424142 0.000000e+00 1170.0
31 TraesCS2A01G179400 chr6A 82.427 239 29 10 7649 7881 51435572 51435341 6.240000e-46 196.0
32 TraesCS2A01G179400 chr7A 93.836 795 35 12 2025 2817 27485582 27486364 0.000000e+00 1184.0
33 TraesCS2A01G179400 chr7A 92.643 802 45 13 2024 2817 543964924 543964129 0.000000e+00 1142.0
34 TraesCS2A01G179400 chr7A 96.862 478 15 0 7404 7881 150420647 150421124 0.000000e+00 800.0
35 TraesCS2A01G179400 chr7A 89.401 217 21 2 7404 7619 608434496 608434711 1.010000e-68 272.0
36 TraesCS2A01G179400 chr7A 88.940 217 21 3 7404 7619 608427999 608428213 1.690000e-66 265.0
37 TraesCS2A01G179400 chr7A 87.671 219 22 5 7404 7620 608439244 608439029 4.720000e-62 250.0
38 TraesCS2A01G179400 chr4A 93.284 804 39 12 2024 2817 552872260 552873058 0.000000e+00 1171.0
39 TraesCS2A01G179400 chr4A 93.117 494 19 2 7403 7881 258629736 258630229 0.000000e+00 710.0
40 TraesCS2A01G179400 chr1D 87.273 220 24 4 7403 7620 403042081 403042298 1.700000e-61 248.0
41 TraesCS2A01G179400 chr1D 81.967 244 30 11 7649 7881 403043025 403043265 2.240000e-45 195.0
42 TraesCS2A01G179400 chr1D 83.182 220 23 8 7669 7881 41923456 41923244 1.040000e-43 189.0
43 TraesCS2A01G179400 chr7D 86.574 216 28 1 7404 7619 633185479 633185265 3.680000e-58 237.0
44 TraesCS2A01G179400 chr7D 81.507 292 39 10 695 975 14554912 14554625 7.960000e-55 226.0
45 TraesCS2A01G179400 chr7D 81.017 295 42 10 690 975 560290481 560290192 1.030000e-53 222.0
46 TraesCS2A01G179400 chr7D 81.481 243 32 10 7650 7881 633184429 633184669 3.750000e-43 187.0
47 TraesCS2A01G179400 chr6D 81.818 286 38 11 695 971 347714466 347714746 2.210000e-55 228.0
48 TraesCS2A01G179400 chr5D 86.567 201 19 7 3795 3990 206102403 206102206 1.720000e-51 215.0
49 TraesCS2A01G179400 chr5D 80.546 293 42 9 695 973 495199392 495199683 2.230000e-50 211.0
50 TraesCS2A01G179400 chr5D 82.540 189 22 7 2921 3108 206105093 206104915 1.060000e-33 156.0
51 TraesCS2A01G179400 chr5D 83.750 80 13 0 6777 6856 206099334 206099255 8.480000e-10 76.8
52 TraesCS2A01G179400 chr3D 81.053 285 40 9 702 976 601085715 601085995 1.720000e-51 215.0
53 TraesCS2A01G179400 chr5B 86.070 201 20 7 3795 3990 219088721 219088524 8.010000e-50 209.0
54 TraesCS2A01G179400 chr5B 81.250 80 15 0 6777 6856 219085819 219085740 1.840000e-06 65.8
55 TraesCS2A01G179400 chr3B 80.738 244 35 9 7649 7881 511625471 511625713 6.280000e-41 180.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G179400 chr2A 138107503 138115383 7880 True 14554.000000 14554 100.0000 1 7881 1 chr2A.!!$R1 7880
1 TraesCS2A01G179400 chr2B 184955582 184962068 6486 True 1832.800000 5533 94.2564 178 7241 5 chr2B.!!$R2 7063
2 TraesCS2A01G179400 chr2D 131372024 131376236 4212 True 987.216667 3579 90.9175 1152 5989 6 chr2D.!!$R5 4837
3 TraesCS2A01G179400 chr2D 131365802 131367223 1421 True 950.000000 1537 90.8530 5990 7333 2 chr2D.!!$R4 1343
4 TraesCS2A01G179400 chr2D 131380617 131381236 619 True 353.000000 353 78.1590 3 605 1 chr2D.!!$R1 602
5 TraesCS2A01G179400 chr5A 676953122 676953918 796 True 1249.000000 1249 95.0120 2023 2817 1 chr5A.!!$R2 794
6 TraesCS2A01G179400 chr5A 49938489 49939284 795 False 1194.000000 1194 93.7970 2021 2817 1 chr5A.!!$F1 796
7 TraesCS2A01G179400 chr6A 514030587 514031382 795 False 1225.000000 1225 94.5070 2023 2817 1 chr6A.!!$F2 794
8 TraesCS2A01G179400 chr6A 544634322 544635112 790 False 1210.000000 1210 94.2500 2023 2817 1 chr6A.!!$F3 794
9 TraesCS2A01G179400 chr6A 606446929 606447715 786 True 1177.000000 1177 93.6010 2025 2817 1 chr6A.!!$R2 792
10 TraesCS2A01G179400 chr6A 122423345 122424142 797 False 1170.000000 1170 93.2010 2025 2822 1 chr6A.!!$F1 797
11 TraesCS2A01G179400 chr7A 27485582 27486364 782 False 1184.000000 1184 93.8360 2025 2817 1 chr7A.!!$F1 792
12 TraesCS2A01G179400 chr7A 543964129 543964924 795 True 1142.000000 1142 92.6430 2024 2817 1 chr7A.!!$R1 793
13 TraesCS2A01G179400 chr4A 552872260 552873058 798 False 1171.000000 1171 93.2840 2024 2817 1 chr4A.!!$F2 793
14 TraesCS2A01G179400 chr1D 403042081 403043265 1184 False 221.500000 248 84.6200 7403 7881 2 chr1D.!!$F1 478

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
945 1215 0.034198 TGATCGTTGCGAGGTTTCCA 59.966 50.000 0.00 0.00 39.91 3.53 F
1637 2093 0.030638 AACGATTGTTGTGCACTGGC 59.969 50.000 19.41 8.55 36.81 4.85 F
1644 2100 1.227943 TTGTGCACTGGCCAGTCTC 60.228 57.895 35.79 27.71 40.20 3.36 F
2732 3284 1.691196 TGGCCAGTTTTGAGAGTTGG 58.309 50.000 0.00 0.00 0.00 3.77 F
3111 3665 2.101249 ACAGACCTTGTGCACCAATTTG 59.899 45.455 15.69 8.44 38.99 2.32 F
4022 4734 2.290641 AGCCATGTTTCGTTGTCACTTC 59.709 45.455 0.00 0.00 0.00 3.01 F
4922 5640 1.940613 GTTGAGAAGGTTGCGAACAGT 59.059 47.619 0.00 0.00 0.00 3.55 F
6346 7068 1.008327 TCTGTCCTATCCAGAAGCCCA 59.992 52.381 0.00 0.00 36.07 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2919 3473 0.627451 AGATTGGCTGGGATTGCTGA 59.373 50.000 0.00 0.00 0.00 4.26 R
3092 3646 1.069049 GCAAATTGGTGCACAAGGTCT 59.931 47.619 20.43 0.00 43.48 3.85 R
3367 3926 1.275573 ACGGCTAAACTCACCTCTTCC 59.724 52.381 0.00 0.00 0.00 3.46 R
3899 4611 1.485124 TCATCAGAAGCGGCTTCCTA 58.515 50.000 32.81 23.47 40.98 2.94 R
4754 5468 1.750778 ACCATGATTTCAATCGGGTGC 59.249 47.619 12.50 0.00 41.35 5.01 R
5883 6603 7.009540 GCAGCATGTATTTGGACAATCTTTAAC 59.990 37.037 0.00 0.00 39.31 2.01 R
6644 7367 0.457035 CGATGCCCAAAACTCCCATG 59.543 55.000 0.00 0.00 0.00 3.66 R
7511 8315 0.236187 GCACGCGTATTTTGTGACCA 59.764 50.000 13.44 0.00 35.66 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.874175 CGACAAGTTCGTGCAGTGGA 60.874 55.000 0.00 0.00 43.24 4.02
23 24 0.582005 GACAAGTTCGTGCAGTGGAC 59.418 55.000 4.41 4.41 0.00 4.02
24 25 1.151777 ACAAGTTCGTGCAGTGGACG 61.152 55.000 28.81 28.81 38.20 4.79
25 26 1.594293 AAGTTCGTGCAGTGGACGG 60.594 57.895 32.51 16.83 37.43 4.79
59 60 1.646447 TGTACAGTCCAGGAGGAGGAT 59.354 52.381 0.00 0.00 46.92 3.24
64 65 1.933765 AGTCCAGGAGGAGGATACACT 59.066 52.381 0.00 0.00 46.92 3.55
73 74 6.713903 CAGGAGGAGGATACACTTATACGTAA 59.286 42.308 0.00 0.00 41.41 3.18
108 109 4.101448 CTTGGCCACGGGGAGGAG 62.101 72.222 8.67 0.00 35.59 3.69
135 136 0.317160 TGTGAGCACGGACTAGTTGG 59.683 55.000 0.00 0.00 0.00 3.77
137 138 1.448013 GAGCACGGACTAGTTGGCC 60.448 63.158 0.00 0.00 41.70 5.36
141 142 0.249120 CACGGACTAGTTGGCCATGA 59.751 55.000 6.09 0.00 40.00 3.07
148 149 0.981183 TAGTTGGCCATGAGGTCGTT 59.019 50.000 6.09 0.00 44.71 3.85
154 155 1.079819 CCATGAGGTCGTTGTCGCT 60.080 57.895 0.00 0.00 36.96 4.93
156 157 1.079819 ATGAGGTCGTTGTCGCTGG 60.080 57.895 0.00 0.00 36.96 4.85
171 172 2.666190 TGGCGACTCAGCAACAGC 60.666 61.111 0.00 0.00 39.27 4.40
172 173 2.666190 GGCGACTCAGCAACAGCA 60.666 61.111 0.00 0.00 39.27 4.41
174 175 1.082496 GCGACTCAGCAACAGCAAC 60.082 57.895 0.00 0.00 37.05 4.17
176 177 0.882042 CGACTCAGCAACAGCAACCT 60.882 55.000 0.00 0.00 0.00 3.50
284 291 4.221041 AGAAACAACCCCGAACTTCAAAAA 59.779 37.500 0.00 0.00 0.00 1.94
292 299 4.142838 CCCCGAACTTCAAAAACGTATACC 60.143 45.833 0.00 0.00 0.00 2.73
295 302 6.368516 CCCGAACTTCAAAAACGTATACCTTA 59.631 38.462 0.00 0.00 0.00 2.69
326 333 7.610865 TCAAACTTTCAAAACAGGTCAGAAAT 58.389 30.769 0.00 0.00 0.00 2.17
330 337 7.785033 ACTTTCAAAACAGGTCAGAAATCAAT 58.215 30.769 0.00 0.00 0.00 2.57
339 346 8.311395 ACAGGTCAGAAATCAATATGTCTCTA 57.689 34.615 0.00 0.00 25.93 2.43
439 446 8.593492 AAATCTGCTAACATTTTTCAAAGTCC 57.407 30.769 0.00 0.00 0.00 3.85
634 648 9.733219 AGGCAAAAATTTAAATTCACAAACATG 57.267 25.926 13.68 0.00 0.00 3.21
696 712 8.741101 TTCATATTCACAAAATTTTCTGACGG 57.259 30.769 8.22 0.00 0.00 4.79
697 713 8.105097 TCATATTCACAAAATTTTCTGACGGA 57.895 30.769 8.22 2.53 0.00 4.69
698 714 8.572185 TCATATTCACAAAATTTTCTGACGGAA 58.428 29.630 8.22 0.00 0.00 4.30
699 715 8.853345 CATATTCACAAAATTTTCTGACGGAAG 58.147 33.333 8.22 0.00 35.16 3.46
700 716 4.606961 TCACAAAATTTTCTGACGGAAGC 58.393 39.130 4.93 0.00 35.16 3.86
701 717 4.097135 TCACAAAATTTTCTGACGGAAGCA 59.903 37.500 4.93 0.00 35.16 3.91
702 718 4.803088 CACAAAATTTTCTGACGGAAGCAA 59.197 37.500 0.00 0.00 35.16 3.91
704 720 5.872070 ACAAAATTTTCTGACGGAAGCAAAA 59.128 32.000 0.00 0.00 35.16 2.44
705 721 5.966636 AAATTTTCTGACGGAAGCAAAAC 57.033 34.783 0.00 0.00 35.16 2.43
707 723 6.385649 AATTTTCTGACGGAAGCAAAACTA 57.614 33.333 0.00 0.00 35.16 2.24
709 725 5.356882 TTTCTGACGGAAGCAAAACTATG 57.643 39.130 0.00 0.00 35.16 2.23
710 726 4.265904 TCTGACGGAAGCAAAACTATGA 57.734 40.909 0.00 0.00 0.00 2.15
712 728 3.997021 CTGACGGAAGCAAAACTATGACT 59.003 43.478 0.00 0.00 0.00 3.41
713 729 3.994392 TGACGGAAGCAAAACTATGACTC 59.006 43.478 0.00 0.00 0.00 3.36
714 730 4.246458 GACGGAAGCAAAACTATGACTCT 58.754 43.478 0.00 0.00 0.00 3.24
715 731 4.246458 ACGGAAGCAAAACTATGACTCTC 58.754 43.478 0.00 0.00 0.00 3.20
716 732 3.304559 CGGAAGCAAAACTATGACTCTCG 59.695 47.826 0.00 0.00 0.00 4.04
719 735 2.094700 AGCAAAACTATGACTCTCGCGA 60.095 45.455 9.26 9.26 0.00 5.87
720 736 2.666508 GCAAAACTATGACTCTCGCGAA 59.333 45.455 11.33 0.00 0.00 4.70
722 738 4.722346 GCAAAACTATGACTCTCGCGAAAG 60.722 45.833 11.33 9.68 0.00 2.62
723 739 4.436242 AAACTATGACTCTCGCGAAAGA 57.564 40.909 17.91 7.21 0.00 2.52
725 741 3.760537 ACTATGACTCTCGCGAAAGAAC 58.239 45.455 17.91 10.16 0.00 3.01
726 742 2.724977 ATGACTCTCGCGAAAGAACA 57.275 45.000 17.91 15.40 0.00 3.18
727 743 2.502213 TGACTCTCGCGAAAGAACAA 57.498 45.000 17.91 0.00 0.00 2.83
728 744 2.816689 TGACTCTCGCGAAAGAACAAA 58.183 42.857 17.91 0.00 0.00 2.83
729 745 3.191669 TGACTCTCGCGAAAGAACAAAA 58.808 40.909 17.91 0.00 0.00 2.44
730 746 3.619483 TGACTCTCGCGAAAGAACAAAAA 59.381 39.130 17.91 0.00 0.00 1.94
789 1059 4.457466 TCAAAAAGCTAAAGAAGACCGGT 58.543 39.130 6.92 6.92 0.00 5.28
790 1060 4.274950 TCAAAAAGCTAAAGAAGACCGGTG 59.725 41.667 14.63 0.00 0.00 4.94
791 1061 2.474410 AAGCTAAAGAAGACCGGTGG 57.526 50.000 14.63 0.00 0.00 4.61
795 1065 3.143728 GCTAAAGAAGACCGGTGGAAAA 58.856 45.455 14.63 0.00 0.00 2.29
797 1067 2.721425 AAGAAGACCGGTGGAAAACA 57.279 45.000 14.63 0.00 0.00 2.83
799 1069 3.007473 AGAAGACCGGTGGAAAACAAA 57.993 42.857 14.63 0.00 0.00 2.83
801 1071 3.958147 AGAAGACCGGTGGAAAACAAAAT 59.042 39.130 14.63 0.00 0.00 1.82
802 1072 3.726291 AGACCGGTGGAAAACAAAATG 57.274 42.857 14.63 0.00 0.00 2.32
806 1076 3.195825 ACCGGTGGAAAACAAAATGTTGA 59.804 39.130 6.12 0.00 40.14 3.18
808 1078 4.631813 CCGGTGGAAAACAAAATGTTGAAA 59.368 37.500 1.62 0.00 40.14 2.69
809 1079 5.122396 CCGGTGGAAAACAAAATGTTGAAAA 59.878 36.000 1.62 0.00 40.14 2.29
810 1080 6.348540 CCGGTGGAAAACAAAATGTTGAAAAA 60.349 34.615 1.62 0.00 40.14 1.94
834 1104 6.847956 ACCCAAAATAACCGTTTAAAAAGC 57.152 33.333 0.00 0.00 0.00 3.51
835 1105 5.759273 ACCCAAAATAACCGTTTAAAAAGCC 59.241 36.000 0.00 0.00 0.00 4.35
836 1106 5.758784 CCCAAAATAACCGTTTAAAAAGCCA 59.241 36.000 0.00 0.00 0.00 4.75
837 1107 6.260271 CCCAAAATAACCGTTTAAAAAGCCAA 59.740 34.615 0.00 0.00 0.00 4.52
838 1108 7.201705 CCCAAAATAACCGTTTAAAAAGCCAAA 60.202 33.333 0.00 0.00 0.00 3.28
839 1109 8.182227 CCAAAATAACCGTTTAAAAAGCCAAAA 58.818 29.630 0.00 0.00 0.00 2.44
840 1110 9.556030 CAAAATAACCGTTTAAAAAGCCAAAAA 57.444 25.926 0.00 0.00 0.00 1.94
842 1112 9.723447 AAATAACCGTTTAAAAAGCCAAAAATG 57.277 25.926 0.00 0.00 0.00 2.32
843 1113 5.163302 ACCGTTTAAAAAGCCAAAAATGC 57.837 34.783 0.00 0.00 0.00 3.56
844 1114 4.636206 ACCGTTTAAAAAGCCAAAAATGCA 59.364 33.333 0.00 0.00 0.00 3.96
845 1115 5.298026 ACCGTTTAAAAAGCCAAAAATGCAT 59.702 32.000 0.00 0.00 0.00 3.96
846 1116 5.624491 CCGTTTAAAAAGCCAAAAATGCATG 59.376 36.000 0.00 0.00 0.00 4.06
847 1117 6.197981 CGTTTAAAAAGCCAAAAATGCATGT 58.802 32.000 0.00 0.00 0.00 3.21
848 1118 6.140422 CGTTTAAAAAGCCAAAAATGCATGTG 59.860 34.615 0.00 0.00 0.00 3.21
849 1119 4.571372 AAAAAGCCAAAAATGCATGTGG 57.429 36.364 16.44 16.44 0.00 4.17
850 1120 3.488778 AAAGCCAAAAATGCATGTGGA 57.511 38.095 22.35 0.00 32.54 4.02
851 1121 3.488778 AAGCCAAAAATGCATGTGGAA 57.511 38.095 22.35 0.00 32.54 3.53
852 1122 3.488778 AGCCAAAAATGCATGTGGAAA 57.511 38.095 22.35 0.00 32.54 3.13
853 1123 3.818180 AGCCAAAAATGCATGTGGAAAA 58.182 36.364 22.35 0.00 32.54 2.29
854 1124 4.400120 AGCCAAAAATGCATGTGGAAAAT 58.600 34.783 22.35 7.04 32.54 1.82
855 1125 5.558818 AGCCAAAAATGCATGTGGAAAATA 58.441 33.333 22.35 0.00 32.54 1.40
856 1126 6.002704 AGCCAAAAATGCATGTGGAAAATAA 58.997 32.000 22.35 0.00 32.54 1.40
857 1127 6.489361 AGCCAAAAATGCATGTGGAAAATAAA 59.511 30.769 22.35 0.00 32.54 1.40
858 1128 7.014038 AGCCAAAAATGCATGTGGAAAATAAAA 59.986 29.630 22.35 0.00 32.54 1.52
859 1129 7.650903 GCCAAAAATGCATGTGGAAAATAAAAA 59.349 29.630 22.35 0.00 32.54 1.94
882 1152 8.662781 AAAAACAAAATCTAGAGAAAAAGCCC 57.337 30.769 0.00 0.00 0.00 5.19
883 1153 6.976934 AACAAAATCTAGAGAAAAAGCCCA 57.023 33.333 0.00 0.00 0.00 5.36
884 1154 6.581171 ACAAAATCTAGAGAAAAAGCCCAG 57.419 37.500 0.00 0.00 0.00 4.45
885 1155 6.306987 ACAAAATCTAGAGAAAAAGCCCAGA 58.693 36.000 0.00 0.00 0.00 3.86
886 1156 6.432472 ACAAAATCTAGAGAAAAAGCCCAGAG 59.568 38.462 0.00 0.00 0.00 3.35
887 1157 3.618690 TCTAGAGAAAAAGCCCAGAGC 57.381 47.619 0.00 0.00 44.25 4.09
896 1166 4.008933 GCCCAGAGCGACAGGTGT 62.009 66.667 0.00 0.00 0.00 4.16
897 1167 2.262915 CCCAGAGCGACAGGTGTC 59.737 66.667 0.00 0.00 41.47 3.67
907 1177 2.380084 GACAGGTGTCGAATGGCTAA 57.620 50.000 0.00 0.00 35.12 3.09
908 1178 2.695359 GACAGGTGTCGAATGGCTAAA 58.305 47.619 0.00 0.00 35.12 1.85
909 1179 3.071479 GACAGGTGTCGAATGGCTAAAA 58.929 45.455 0.00 0.00 35.12 1.52
910 1180 3.482436 ACAGGTGTCGAATGGCTAAAAA 58.518 40.909 0.00 0.00 0.00 1.94
911 1181 3.252458 ACAGGTGTCGAATGGCTAAAAAC 59.748 43.478 0.00 0.00 0.00 2.43
912 1182 2.482721 AGGTGTCGAATGGCTAAAAACG 59.517 45.455 0.00 0.00 0.00 3.60
913 1183 2.239201 GTGTCGAATGGCTAAAAACGC 58.761 47.619 0.00 0.00 0.00 4.84
914 1184 1.136197 TGTCGAATGGCTAAAAACGCG 60.136 47.619 3.53 3.53 0.00 6.01
915 1185 0.179210 TCGAATGGCTAAAAACGCGC 60.179 50.000 5.73 0.00 0.00 6.86
916 1186 1.131618 CGAATGGCTAAAAACGCGCC 61.132 55.000 5.73 0.00 0.00 6.53
917 1187 0.109504 GAATGGCTAAAAACGCGCCA 60.110 50.000 5.73 3.26 34.91 5.69
918 1188 0.315568 AATGGCTAAAAACGCGCCAA 59.684 45.000 5.73 0.00 34.07 4.52
919 1189 0.109319 ATGGCTAAAAACGCGCCAAG 60.109 50.000 5.73 0.00 34.07 3.61
920 1190 1.284715 GGCTAAAAACGCGCCAAGT 59.715 52.632 5.73 0.00 0.00 3.16
921 1191 1.001745 GGCTAAAAACGCGCCAAGTG 61.002 55.000 5.73 0.00 0.00 3.16
922 1192 1.001745 GCTAAAAACGCGCCAAGTGG 61.002 55.000 5.73 0.00 38.53 4.00
932 1202 2.434884 CCAAGTGGCGCTGATCGT 60.435 61.111 7.64 0.00 41.07 3.73
933 1203 2.034879 CCAAGTGGCGCTGATCGTT 61.035 57.895 7.64 0.00 41.07 3.85
934 1204 1.133253 CAAGTGGCGCTGATCGTTG 59.867 57.895 7.64 0.00 41.07 4.10
935 1205 2.680913 AAGTGGCGCTGATCGTTGC 61.681 57.895 7.64 0.00 41.07 4.17
941 1211 3.876300 GCTGATCGTTGCGAGGTT 58.124 55.556 0.00 0.00 39.91 3.50
942 1212 2.162716 GCTGATCGTTGCGAGGTTT 58.837 52.632 0.00 0.00 39.91 3.27
943 1213 0.095417 GCTGATCGTTGCGAGGTTTC 59.905 55.000 0.00 0.00 39.91 2.78
944 1214 0.721718 CTGATCGTTGCGAGGTTTCC 59.278 55.000 0.00 0.00 39.91 3.13
945 1215 0.034198 TGATCGTTGCGAGGTTTCCA 59.966 50.000 0.00 0.00 39.91 3.53
946 1216 1.153353 GATCGTTGCGAGGTTTCCAA 58.847 50.000 0.00 0.00 39.91 3.53
947 1217 1.533731 GATCGTTGCGAGGTTTCCAAA 59.466 47.619 0.00 0.00 39.91 3.28
948 1218 0.941542 TCGTTGCGAGGTTTCCAAAG 59.058 50.000 0.00 0.00 0.00 2.77
949 1219 0.040425 CGTTGCGAGGTTTCCAAAGG 60.040 55.000 0.00 0.00 0.00 3.11
950 1220 1.314730 GTTGCGAGGTTTCCAAAGGA 58.685 50.000 0.00 0.00 0.00 3.36
951 1221 1.266989 GTTGCGAGGTTTCCAAAGGAG 59.733 52.381 0.00 0.00 31.21 3.69
952 1222 0.889186 TGCGAGGTTTCCAAAGGAGC 60.889 55.000 0.00 0.00 31.21 4.70
953 1223 1.912371 GCGAGGTTTCCAAAGGAGCG 61.912 60.000 0.00 0.00 31.21 5.03
954 1224 1.876664 GAGGTTTCCAAAGGAGCGC 59.123 57.895 0.00 0.00 31.21 5.92
955 1225 0.606673 GAGGTTTCCAAAGGAGCGCT 60.607 55.000 11.27 11.27 31.21 5.92
956 1226 0.178990 AGGTTTCCAAAGGAGCGCTT 60.179 50.000 13.26 0.00 31.21 4.68
957 1227 0.039165 GGTTTCCAAAGGAGCGCTTG 60.039 55.000 13.26 5.42 31.21 4.01
958 1228 0.668535 GTTTCCAAAGGAGCGCTTGT 59.331 50.000 13.26 0.00 31.21 3.16
959 1229 1.067060 GTTTCCAAAGGAGCGCTTGTT 59.933 47.619 13.26 5.19 31.21 2.83
960 1230 2.264005 TTCCAAAGGAGCGCTTGTTA 57.736 45.000 13.26 0.00 31.21 2.41
961 1231 2.264005 TCCAAAGGAGCGCTTGTTAA 57.736 45.000 13.26 0.00 0.00 2.01
962 1232 1.877443 TCCAAAGGAGCGCTTGTTAAC 59.123 47.619 13.26 0.00 0.00 2.01
963 1233 1.606668 CCAAAGGAGCGCTTGTTAACA 59.393 47.619 13.26 3.59 0.00 2.41
964 1234 2.034053 CCAAAGGAGCGCTTGTTAACAA 59.966 45.455 19.53 19.53 0.00 2.83
965 1235 7.444408 TTCCAAAGGAGCGCTTGTTAACAAG 62.444 44.000 34.22 34.22 43.52 3.16
975 1245 3.977427 CTTGTTAACAAGTTGCTTCCCC 58.023 45.455 31.55 0.00 46.11 4.81
976 1246 3.019799 TGTTAACAAGTTGCTTCCCCA 57.980 42.857 5.64 0.00 0.00 4.96
977 1247 2.955660 TGTTAACAAGTTGCTTCCCCAG 59.044 45.455 5.64 0.00 0.00 4.45
978 1248 3.219281 GTTAACAAGTTGCTTCCCCAGA 58.781 45.455 1.81 0.00 0.00 3.86
979 1249 2.683211 AACAAGTTGCTTCCCCAGAT 57.317 45.000 1.81 0.00 0.00 2.90
980 1250 2.683211 ACAAGTTGCTTCCCCAGATT 57.317 45.000 1.81 0.00 0.00 2.40
981 1251 2.242043 ACAAGTTGCTTCCCCAGATTG 58.758 47.619 1.81 0.00 0.00 2.67
982 1252 2.242043 CAAGTTGCTTCCCCAGATTGT 58.758 47.619 0.00 0.00 0.00 2.71
983 1253 3.181434 ACAAGTTGCTTCCCCAGATTGTA 60.181 43.478 1.81 0.00 0.00 2.41
984 1254 3.073274 AGTTGCTTCCCCAGATTGTAC 57.927 47.619 0.00 0.00 0.00 2.90
1000 1270 2.246469 TGTACCCTACGCCTACAAACA 58.754 47.619 0.00 0.00 0.00 2.83
1004 1274 1.014352 CCTACGCCTACAAACATGGC 58.986 55.000 0.00 0.00 42.94 4.40
1021 1291 1.228657 GGCGATCGGAGTTAATGGGC 61.229 60.000 18.30 0.00 0.00 5.36
1023 1293 0.105964 CGATCGGAGTTAATGGGCCA 59.894 55.000 9.61 9.61 0.00 5.36
1026 1296 1.224592 CGGAGTTAATGGGCCAGCT 59.775 57.895 13.78 7.41 0.00 4.24
1102 1376 1.890894 CCACTCCGGAGAACACGAT 59.109 57.895 37.69 10.86 36.56 3.73
1190 1471 0.321122 CCAACCACTGCAGGTCTCTC 60.321 60.000 19.93 0.00 42.25 3.20
1466 1839 6.737254 AGGAAAAATCGTTGAATGATACGT 57.263 33.333 0.00 0.00 38.79 3.57
1524 1897 6.296605 GGTTTATGTACTGGGGTTTAAGGAGA 60.297 42.308 0.00 0.00 0.00 3.71
1598 1971 7.701924 GTGAATTCCATGAAAATCGCATCTTAA 59.298 33.333 2.27 0.00 0.00 1.85
1608 1981 3.149436 TCGCATCTTAATTTGGCTTGC 57.851 42.857 0.00 0.00 0.00 4.01
1637 2093 0.030638 AACGATTGTTGTGCACTGGC 59.969 50.000 19.41 8.55 36.81 4.85
1644 2100 1.227943 TTGTGCACTGGCCAGTCTC 60.228 57.895 35.79 27.71 40.20 3.36
1710 2166 3.315749 GGAAAGACTCTACCGACATCGAT 59.684 47.826 2.09 0.00 43.02 3.59
1828 2287 7.944729 ATTATCCCATGGTATGCAATCTTAC 57.055 36.000 11.73 0.00 0.00 2.34
1850 2343 9.610705 CTTACTATAGCTGATATCATTTGCCAT 57.389 33.333 5.72 3.93 0.00 4.40
1928 2422 3.389656 AGTTTAATAGAGGCAGGGAGAGC 59.610 47.826 0.00 0.00 0.00 4.09
1947 2441 4.079787 AGAGCCACTATTTTATCCAAGCCA 60.080 41.667 0.00 0.00 0.00 4.75
1954 2448 7.378181 CACTATTTTATCCAAGCCAAGTGTTT 58.622 34.615 0.00 0.00 0.00 2.83
1959 2453 4.584327 ATCCAAGCCAAGTGTTTTGTAC 57.416 40.909 0.00 0.00 0.00 2.90
2072 2567 8.062536 CCCAACTCTAGCCCTAGTCTAATATAT 58.937 40.741 2.53 0.00 34.84 0.86
2376 2898 6.111382 TCAAAATTTTCAGCATGGTGAACAA 58.889 32.000 33.71 28.06 36.15 2.83
2732 3284 1.691196 TGGCCAGTTTTGAGAGTTGG 58.309 50.000 0.00 0.00 0.00 3.77
2787 3341 5.655974 GGGGTGTATATTAGACTAGGGCTAC 59.344 48.000 0.00 0.00 0.00 3.58
2817 3371 3.118629 GGGTGTCATATGCACTTCTCTCA 60.119 47.826 21.55 1.13 37.07 3.27
2818 3372 4.444022 GGGTGTCATATGCACTTCTCTCAT 60.444 45.833 21.55 0.00 37.07 2.90
2819 3373 5.221521 GGGTGTCATATGCACTTCTCTCATA 60.222 44.000 21.55 0.00 37.07 2.15
2820 3374 5.694006 GGTGTCATATGCACTTCTCTCATAC 59.306 44.000 21.55 3.70 37.07 2.39
2821 3375 6.276091 GTGTCATATGCACTTCTCTCATACA 58.724 40.000 17.63 2.97 34.30 2.29
2822 3376 6.927936 GTGTCATATGCACTTCTCTCATACAT 59.072 38.462 17.63 0.00 34.30 2.29
2823 3377 6.927381 TGTCATATGCACTTCTCTCATACATG 59.073 38.462 0.00 0.00 0.00 3.21
2827 3381 5.411831 TGCACTTCTCTCATACATGTTCT 57.588 39.130 2.30 0.00 0.00 3.01
2830 3384 7.038048 TGCACTTCTCTCATACATGTTCTTAG 58.962 38.462 2.30 0.00 0.00 2.18
2835 3389 5.303078 TCTCTCATACATGTTCTTAGCTCCC 59.697 44.000 2.30 0.00 0.00 4.30
2852 3406 3.939592 GCTCCCAAGTGTACCATACTTTC 59.060 47.826 0.00 0.00 36.29 2.62
2891 3445 8.940768 TGCAGTAATTTAAATGCCTTTTATCC 57.059 30.769 0.39 0.00 37.89 2.59
2929 3483 7.404671 TTTTATAGTTTCCTTCAGCAATCCC 57.595 36.000 0.00 0.00 0.00 3.85
2930 3484 2.978156 AGTTTCCTTCAGCAATCCCA 57.022 45.000 0.00 0.00 0.00 4.37
2988 3542 6.880942 TCTATCTGACATCTCTGACATCTG 57.119 41.667 0.00 0.00 0.00 2.90
3053 3607 3.132289 CAGTCGTATTCCCACTGTGGTAT 59.868 47.826 24.32 18.46 35.17 2.73
3092 3646 8.306038 AGAATTGCTTTGCATACTCATTTTACA 58.694 29.630 0.00 0.00 38.76 2.41
3111 3665 2.101249 ACAGACCTTGTGCACCAATTTG 59.899 45.455 15.69 8.44 38.99 2.32
3141 3697 9.162764 GTTTACTGGTATGTCATACTTGTTGAT 57.837 33.333 19.90 4.91 36.04 2.57
3318 3877 8.876275 TTTGTCCTCTCTGAATTTTGAATTTG 57.124 30.769 0.00 0.00 0.00 2.32
3367 3926 5.121768 ACGAAATCGGTGGAAGATTTAACTG 59.878 40.000 7.81 0.00 45.18 3.16
3447 4009 7.728148 TCCGTGCTTCTATGTAACCATAATTA 58.272 34.615 0.00 0.00 33.23 1.40
3586 4150 7.554476 TCCGATTTGGTATATTCAAACATCACA 59.446 33.333 6.42 0.00 37.00 3.58
3832 4544 8.134895 TGAACAGTGACTTGGAACATTAATTTC 58.865 33.333 0.00 0.00 39.30 2.17
3973 4685 3.616560 GCAGAGAACGTATTGGTCAGGAA 60.617 47.826 0.00 0.00 0.00 3.36
4021 4733 2.297701 AGCCATGTTTCGTTGTCACTT 58.702 42.857 0.00 0.00 0.00 3.16
4022 4734 2.290641 AGCCATGTTTCGTTGTCACTTC 59.709 45.455 0.00 0.00 0.00 3.01
4028 4740 6.970043 CCATGTTTCGTTGTCACTTCTTTTTA 59.030 34.615 0.00 0.00 0.00 1.52
4227 4941 7.613411 TCAACAAACATGATTGGTATGTCCATA 59.387 33.333 18.61 0.00 46.60 2.74
4334 5048 3.778619 CACCACCAGTGTTCACTGA 57.221 52.632 27.70 0.00 41.93 3.41
4524 5238 8.579850 TTTTCAGCATGTCTTGTTAAGGATAT 57.420 30.769 0.00 0.00 37.40 1.63
4750 5464 6.118852 ACAAAAACAGGGCACATACATTTTT 58.881 32.000 0.00 0.00 0.00 1.94
4922 5640 1.940613 GTTGAGAAGGTTGCGAACAGT 59.059 47.619 0.00 0.00 0.00 3.55
5561 6280 9.474920 CAAAAATTGTATCTGTTAAAGCAGGAA 57.525 29.630 0.00 0.00 37.12 3.36
6064 6784 5.585445 TGCTGAACATGCTTGTTTTCAAATT 59.415 32.000 17.99 0.00 46.01 1.82
6134 6854 6.809689 GTGATGTCAATTGCTTGATTTGATCA 59.190 34.615 0.00 0.00 43.08 2.92
6255 6977 4.854399 TGCTAGACCAAAATTTTGTGACG 58.146 39.130 25.25 14.58 36.45 4.35
6343 7065 2.102252 CCACTCTGTCCTATCCAGAAGC 59.898 54.545 0.00 0.00 38.42 3.86
6346 7068 1.008327 TCTGTCCTATCCAGAAGCCCA 59.992 52.381 0.00 0.00 36.07 5.36
6392 7114 5.221601 CCAGCAGGATGAGCTAAATAGAAGA 60.222 44.000 0.00 0.00 41.14 2.87
6497 7219 3.901222 TCCTACCTGATGATGCCGAATTA 59.099 43.478 0.00 0.00 0.00 1.40
6573 7296 7.859325 TTGCTGTCCTGATTTATACCTTAAC 57.141 36.000 0.00 0.00 0.00 2.01
6596 7319 4.331168 CCATTTGGTTCTTCAGATCTCGAC 59.669 45.833 0.00 0.00 0.00 4.20
6598 7321 2.433436 TGGTTCTTCAGATCTCGACGA 58.567 47.619 0.00 0.00 0.00 4.20
6613 7336 2.884639 TCGACGATGCATGGAAGATAGA 59.115 45.455 16.26 2.72 0.00 1.98
6616 7339 4.795795 CGACGATGCATGGAAGATAGATAC 59.204 45.833 16.26 0.00 0.00 2.24
6618 7341 5.718146 ACGATGCATGGAAGATAGATACAG 58.282 41.667 16.26 0.00 0.00 2.74
6619 7342 5.107824 CGATGCATGGAAGATAGATACAGG 58.892 45.833 2.46 0.00 0.00 4.00
6620 7343 5.337089 CGATGCATGGAAGATAGATACAGGT 60.337 44.000 2.46 0.00 0.00 4.00
6638 7361 2.125147 CCGCTGCTCGATGGGAAA 60.125 61.111 0.00 0.00 41.67 3.13
6644 7367 2.208431 CTGCTCGATGGGAAAGACATC 58.792 52.381 0.00 0.00 40.95 3.06
6658 7381 3.091633 AGACATCATGGGAGTTTTGGG 57.908 47.619 0.00 0.00 0.00 4.12
6680 7403 0.903454 TCGGAGAAGGTCCCTTGGTC 60.903 60.000 2.65 0.24 43.47 4.02
6682 7405 0.615850 GGAGAAGGTCCCTTGGTCAG 59.384 60.000 2.65 0.00 39.88 3.51
6697 7420 3.181329 TGGTCAGAGAATGGGTACACAT 58.819 45.455 4.28 4.28 0.00 3.21
6703 7426 5.045651 TCAGAGAATGGGTACACATTGATGT 60.046 40.000 27.66 11.70 40.92 3.06
6750 7474 7.149307 TCACATTGTTCTAGTTGTCGACATTA 58.851 34.615 20.80 13.78 0.00 1.90
6760 7484 8.817100 TCTAGTTGTCGACATTATTAATGCAAG 58.183 33.333 20.80 7.81 42.69 4.01
6894 7621 1.544825 ATGTAGGACGCAGCACCTGT 61.545 55.000 15.89 0.00 38.04 4.00
6924 7651 3.386768 ACATTGTGAGCGTAGACAGTT 57.613 42.857 0.00 0.00 0.00 3.16
6931 7658 0.824759 AGCGTAGACAGTTGGGGATC 59.175 55.000 0.00 0.00 0.00 3.36
6934 7661 2.628657 GCGTAGACAGTTGGGGATCTAT 59.371 50.000 0.00 0.00 0.00 1.98
6968 7695 2.557056 CTCCACCGGATGATACGTGTAT 59.443 50.000 9.46 0.00 0.00 2.29
6973 7700 5.277154 CCACCGGATGATACGTGTATTTTTC 60.277 44.000 9.46 0.00 0.00 2.29
7036 7835 0.727398 GCCGGTAGTTGATTGCTGAC 59.273 55.000 1.90 0.00 0.00 3.51
7039 7838 2.422597 CGGTAGTTGATTGCTGACCAA 58.577 47.619 0.00 0.00 37.94 3.67
7040 7839 2.811431 CGGTAGTTGATTGCTGACCAAA 59.189 45.455 0.00 0.00 36.92 3.28
7041 7840 3.440173 CGGTAGTTGATTGCTGACCAAAT 59.560 43.478 0.00 0.00 36.92 2.32
7050 7849 6.465948 TGATTGCTGACCAAATAATTTTGCT 58.534 32.000 0.00 0.00 40.77 3.91
7088 7887 5.654901 AGTCAGTCTATCACCTATCCAGA 57.345 43.478 0.00 0.00 0.00 3.86
7096 7895 6.207810 GTCTATCACCTATCCAGACCACTTAG 59.792 46.154 0.00 0.00 31.47 2.18
7103 7902 4.762289 ATCCAGACCACTTAGAATGGAC 57.238 45.455 0.00 0.00 39.51 4.02
7118 7917 2.341846 TGGACTTCGAGGCTGTTTTT 57.658 45.000 0.00 0.00 0.00 1.94
7181 7980 3.434940 AGTTTAGGGGTGATGTTGTCC 57.565 47.619 0.00 0.00 0.00 4.02
7213 8016 3.556843 GGGCATATGCTCTTCTTCCTCTC 60.557 52.174 26.12 5.51 38.82 3.20
7224 8027 6.980397 GCTCTTCTTCCTCTCTAAATTCAGAG 59.020 42.308 0.00 0.00 42.96 3.35
7241 8044 6.859112 TTCAGAGAGAAGGCTAACACTAAT 57.141 37.500 0.00 0.00 0.00 1.73
7242 8045 6.859112 TCAGAGAGAAGGCTAACACTAATT 57.141 37.500 0.00 0.00 0.00 1.40
7243 8046 7.956328 TCAGAGAGAAGGCTAACACTAATTA 57.044 36.000 0.00 0.00 0.00 1.40
7245 8048 8.470805 TCAGAGAGAAGGCTAACACTAATTAAG 58.529 37.037 0.00 0.00 0.00 1.85
7246 8049 7.708752 CAGAGAGAAGGCTAACACTAATTAAGG 59.291 40.741 0.00 0.00 0.00 2.69
7247 8050 6.890293 AGAGAAGGCTAACACTAATTAAGGG 58.110 40.000 0.00 0.00 33.39 3.95
7248 8051 6.672657 AGAGAAGGCTAACACTAATTAAGGGA 59.327 38.462 0.00 0.00 30.77 4.20
7249 8052 6.651086 AGAAGGCTAACACTAATTAAGGGAC 58.349 40.000 0.00 0.00 30.77 4.46
7279 8082 2.533266 CACATCCGTGCTATTAGGCT 57.467 50.000 0.00 0.00 36.06 4.58
7280 8083 2.838736 CACATCCGTGCTATTAGGCTT 58.161 47.619 0.00 0.00 36.06 4.35
7281 8084 2.545526 CACATCCGTGCTATTAGGCTTG 59.454 50.000 0.00 0.00 36.06 4.01
7283 8086 2.309528 TCCGTGCTATTAGGCTTGTG 57.690 50.000 0.00 0.00 0.00 3.33
7284 8087 0.657840 CCGTGCTATTAGGCTTGTGC 59.342 55.000 0.00 0.00 38.76 4.57
7285 8088 0.301687 CGTGCTATTAGGCTTGTGCG 59.698 55.000 0.00 0.00 40.82 5.34
7286 8089 0.028110 GTGCTATTAGGCTTGTGCGC 59.972 55.000 0.00 0.00 40.82 6.09
7287 8090 0.392327 TGCTATTAGGCTTGTGCGCA 60.392 50.000 5.66 5.66 40.82 6.09
7288 8091 0.947244 GCTATTAGGCTTGTGCGCAT 59.053 50.000 15.91 0.00 40.82 4.73
7289 8092 2.143122 GCTATTAGGCTTGTGCGCATA 58.857 47.619 15.91 8.59 40.82 3.14
7297 8101 1.552226 CTTGTGCGCATAATGCAAGG 58.448 50.000 23.02 8.14 45.36 3.61
7330 8134 2.133281 CATTGTGATGGAAGCAGGGA 57.867 50.000 0.00 0.00 24.12 4.20
7333 8137 0.615331 TGTGATGGAAGCAGGGAGTC 59.385 55.000 0.00 0.00 24.12 3.36
7334 8138 0.460987 GTGATGGAAGCAGGGAGTCG 60.461 60.000 0.00 0.00 24.12 4.18
7335 8139 0.614697 TGATGGAAGCAGGGAGTCGA 60.615 55.000 0.00 0.00 0.00 4.20
7336 8140 0.537188 GATGGAAGCAGGGAGTCGAA 59.463 55.000 0.00 0.00 0.00 3.71
7337 8141 0.984230 ATGGAAGCAGGGAGTCGAAA 59.016 50.000 0.00 0.00 0.00 3.46
7338 8142 0.984230 TGGAAGCAGGGAGTCGAAAT 59.016 50.000 0.00 0.00 0.00 2.17
7339 8143 2.184533 TGGAAGCAGGGAGTCGAAATA 58.815 47.619 0.00 0.00 0.00 1.40
7340 8144 2.569853 TGGAAGCAGGGAGTCGAAATAA 59.430 45.455 0.00 0.00 0.00 1.40
7341 8145 3.199946 TGGAAGCAGGGAGTCGAAATAAT 59.800 43.478 0.00 0.00 0.00 1.28
7342 8146 4.407621 TGGAAGCAGGGAGTCGAAATAATA 59.592 41.667 0.00 0.00 0.00 0.98
7343 8147 4.750598 GGAAGCAGGGAGTCGAAATAATAC 59.249 45.833 0.00 0.00 0.00 1.89
7344 8148 5.453480 GGAAGCAGGGAGTCGAAATAATACT 60.453 44.000 0.00 0.00 0.00 2.12
7345 8149 4.950050 AGCAGGGAGTCGAAATAATACTG 58.050 43.478 0.00 0.00 0.00 2.74
7346 8150 3.495001 GCAGGGAGTCGAAATAATACTGC 59.505 47.826 0.00 0.00 41.39 4.40
7347 8151 4.693283 CAGGGAGTCGAAATAATACTGCA 58.307 43.478 0.00 0.00 33.68 4.41
7348 8152 5.116180 CAGGGAGTCGAAATAATACTGCAA 58.884 41.667 0.00 0.00 33.68 4.08
7349 8153 5.760253 CAGGGAGTCGAAATAATACTGCAAT 59.240 40.000 0.00 0.00 33.68 3.56
7350 8154 6.929049 CAGGGAGTCGAAATAATACTGCAATA 59.071 38.462 0.00 0.00 33.68 1.90
7351 8155 7.604164 CAGGGAGTCGAAATAATACTGCAATAT 59.396 37.037 0.00 0.00 33.68 1.28
7352 8156 8.157476 AGGGAGTCGAAATAATACTGCAATATT 58.843 33.333 5.64 5.64 33.68 1.28
7353 8157 8.784043 GGGAGTCGAAATAATACTGCAATATTT 58.216 33.333 5.64 6.04 33.68 1.40
7357 8161 9.944663 GTCGAAATAATACTGCAATATTTTCCA 57.055 29.630 5.64 0.00 31.31 3.53
7365 8169 9.941325 AATACTGCAATATTTTCCATTGTTTCA 57.059 25.926 0.00 0.00 36.08 2.69
7367 8171 8.259049 ACTGCAATATTTTCCATTGTTTCATG 57.741 30.769 0.00 0.00 36.08 3.07
7368 8172 7.879160 ACTGCAATATTTTCCATTGTTTCATGT 59.121 29.630 0.00 0.00 36.08 3.21
7369 8173 8.618702 TGCAATATTTTCCATTGTTTCATGTT 57.381 26.923 0.00 0.00 36.08 2.71
7370 8174 9.064706 TGCAATATTTTCCATTGTTTCATGTTT 57.935 25.926 0.00 0.00 36.08 2.83
7375 8179 7.922505 TTTTCCATTGTTTCATGTTTAGACG 57.077 32.000 0.00 0.00 0.00 4.18
7376 8180 6.869315 TTCCATTGTTTCATGTTTAGACGA 57.131 33.333 0.00 0.00 0.00 4.20
7377 8181 6.480524 TCCATTGTTTCATGTTTAGACGAG 57.519 37.500 0.00 0.00 0.00 4.18
7378 8182 6.227522 TCCATTGTTTCATGTTTAGACGAGA 58.772 36.000 0.00 0.00 0.00 4.04
7379 8183 6.368791 TCCATTGTTTCATGTTTAGACGAGAG 59.631 38.462 0.00 0.00 0.00 3.20
7380 8184 6.402550 CCATTGTTTCATGTTTAGACGAGAGG 60.403 42.308 0.00 0.00 0.00 3.69
7381 8185 5.462530 TGTTTCATGTTTAGACGAGAGGA 57.537 39.130 0.00 0.00 0.00 3.71
7382 8186 6.037786 TGTTTCATGTTTAGACGAGAGGAT 57.962 37.500 0.00 0.00 0.00 3.24
7383 8187 6.464222 TGTTTCATGTTTAGACGAGAGGATT 58.536 36.000 0.00 0.00 0.00 3.01
7384 8188 6.590292 TGTTTCATGTTTAGACGAGAGGATTC 59.410 38.462 0.00 0.00 0.00 2.52
7385 8189 6.531503 TTCATGTTTAGACGAGAGGATTCT 57.468 37.500 0.00 0.00 36.01 2.40
7386 8190 6.531503 TCATGTTTAGACGAGAGGATTCTT 57.468 37.500 0.00 0.00 32.53 2.52
7387 8191 7.640597 TCATGTTTAGACGAGAGGATTCTTA 57.359 36.000 0.00 0.00 32.53 2.10
7388 8192 7.708051 TCATGTTTAGACGAGAGGATTCTTAG 58.292 38.462 0.00 0.00 32.53 2.18
7389 8193 5.892568 TGTTTAGACGAGAGGATTCTTAGC 58.107 41.667 0.00 0.00 32.53 3.09
7390 8194 4.815040 TTAGACGAGAGGATTCTTAGCG 57.185 45.455 0.00 0.00 32.53 4.26
7391 8195 1.950909 AGACGAGAGGATTCTTAGCGG 59.049 52.381 0.00 0.00 32.53 5.52
7392 8196 1.677052 GACGAGAGGATTCTTAGCGGT 59.323 52.381 0.00 0.00 32.53 5.68
7393 8197 1.405821 ACGAGAGGATTCTTAGCGGTG 59.594 52.381 0.00 0.00 32.53 4.94
7394 8198 1.676529 CGAGAGGATTCTTAGCGGTGA 59.323 52.381 0.00 0.00 32.53 4.02
7395 8199 2.294791 CGAGAGGATTCTTAGCGGTGAT 59.705 50.000 0.00 0.00 32.53 3.06
7396 8200 3.243569 CGAGAGGATTCTTAGCGGTGATT 60.244 47.826 0.00 0.00 32.53 2.57
7397 8201 4.698575 GAGAGGATTCTTAGCGGTGATTT 58.301 43.478 0.00 0.00 32.53 2.17
7398 8202 5.104259 AGAGGATTCTTAGCGGTGATTTT 57.896 39.130 0.00 0.00 0.00 1.82
7399 8203 6.235231 AGAGGATTCTTAGCGGTGATTTTA 57.765 37.500 0.00 0.00 0.00 1.52
7400 8204 6.650120 AGAGGATTCTTAGCGGTGATTTTAA 58.350 36.000 0.00 0.00 0.00 1.52
7401 8205 7.110155 AGAGGATTCTTAGCGGTGATTTTAAA 58.890 34.615 0.00 0.00 0.00 1.52
7458 8262 4.829064 TCAATGTTCAGTTTGGTGCTAC 57.171 40.909 0.00 0.00 0.00 3.58
7500 8304 6.961359 TTGTGGTCATCTAACTTAACATCG 57.039 37.500 0.00 0.00 0.00 3.84
7502 8306 4.868171 GTGGTCATCTAACTTAACATCGCA 59.132 41.667 0.00 0.00 0.00 5.10
7511 8315 8.153479 TCTAACTTAACATCGCATGCAAATAT 57.847 30.769 19.57 2.16 0.00 1.28
7527 8331 4.204168 GCAAATATGGTCACAAAATACGCG 59.796 41.667 3.53 3.53 0.00 6.01
7531 8335 0.236187 GGTCACAAAATACGCGTGCA 59.764 50.000 24.59 2.06 0.00 4.57
7551 8355 1.687123 AGACGTATCAGGGTGTATGGC 59.313 52.381 0.00 0.00 0.00 4.40
7561 8365 1.382629 GTGTATGGCCCCACCTGTT 59.617 57.895 0.00 0.00 40.22 3.16
7576 8380 1.291877 CTGTTAGTGAGTGGTGGCGC 61.292 60.000 0.00 0.00 0.00 6.53
7579 8383 1.468506 TTAGTGAGTGGTGGCGCTCA 61.469 55.000 7.64 0.00 39.17 4.26
7580 8384 1.877576 TAGTGAGTGGTGGCGCTCAG 61.878 60.000 7.64 0.00 41.71 3.35
7605 8409 8.387354 AGCTTACTTAATTTTTGCACAAAACAC 58.613 29.630 8.01 0.00 39.70 3.32
7609 8413 6.315144 ACTTAATTTTTGCACAAAACACCCTC 59.685 34.615 8.01 0.00 39.70 4.30
7612 8416 1.550327 TTGCACAAAACACCCTCACA 58.450 45.000 0.00 0.00 0.00 3.58
7613 8417 1.774110 TGCACAAAACACCCTCACAT 58.226 45.000 0.00 0.00 0.00 3.21
7637 8441 4.886247 TTTAACAACCACACTGTACTGC 57.114 40.909 0.00 0.00 0.00 4.40
7638 8442 2.411628 AACAACCACACTGTACTGCA 57.588 45.000 0.00 0.00 0.00 4.41
7639 8443 2.638480 ACAACCACACTGTACTGCAT 57.362 45.000 0.00 0.00 0.00 3.96
7640 8444 3.762407 ACAACCACACTGTACTGCATA 57.238 42.857 0.00 0.00 0.00 3.14
7641 8445 4.286297 ACAACCACACTGTACTGCATAT 57.714 40.909 0.00 0.00 0.00 1.78
7642 8446 5.414789 ACAACCACACTGTACTGCATATA 57.585 39.130 0.00 0.00 0.00 0.86
7643 8447 5.419542 ACAACCACACTGTACTGCATATAG 58.580 41.667 0.00 0.00 0.00 1.31
7644 8448 4.672587 ACCACACTGTACTGCATATAGG 57.327 45.455 0.00 0.00 0.00 2.57
7645 8449 3.181465 ACCACACTGTACTGCATATAGGC 60.181 47.826 1.55 1.55 0.00 3.93
7646 8450 3.181466 CCACACTGTACTGCATATAGGCA 60.181 47.826 12.12 12.12 42.53 4.75
7647 8451 3.804325 CACACTGTACTGCATATAGGCAC 59.196 47.826 8.21 0.00 39.25 5.01
7661 9164 7.138736 GCATATAGGCACGTAAATGTTTGAAT 58.861 34.615 4.13 0.00 0.00 2.57
7662 9165 7.647715 GCATATAGGCACGTAAATGTTTGAATT 59.352 33.333 4.13 0.00 0.00 2.17
7698 9201 9.267096 GCATAATTTAAATATAAGCTGCGAGTC 57.733 33.333 0.01 0.00 0.00 3.36
7715 9221 5.462068 TGCGAGTCTATACATTTTGGATTCG 59.538 40.000 0.00 0.00 38.51 3.34
7754 9260 9.751542 ATTTAACAAACATTTTCAATGTCGGTA 57.248 25.926 2.65 0.00 0.00 4.02
7756 9262 9.751542 TTAACAAACATTTTCAATGTCGGTATT 57.248 25.926 2.65 0.00 0.00 1.89
7758 9264 9.751542 AACAAACATTTTCAATGTCGGTATTAA 57.248 25.926 2.65 0.00 0.00 1.40
7759 9265 9.187455 ACAAACATTTTCAATGTCGGTATTAAC 57.813 29.630 2.65 0.00 0.00 2.01
7760 9266 9.405587 CAAACATTTTCAATGTCGGTATTAACT 57.594 29.630 2.65 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 2.117423 TCTCCTCCGTCCACTGCA 59.883 61.111 0.00 0.00 0.00 4.41
38 39 1.006043 TCCTCCTCCTGGACTGTACAG 59.994 57.143 21.44 21.44 37.46 2.74
100 101 3.787001 CAAGCGACCCTCCTCCCC 61.787 72.222 0.00 0.00 0.00 4.81
101 102 3.003763 ACAAGCGACCCTCCTCCC 61.004 66.667 0.00 0.00 0.00 4.30
102 103 2.232298 CTCACAAGCGACCCTCCTCC 62.232 65.000 0.00 0.00 0.00 4.30
115 116 1.270094 CCAACTAGTCCGTGCTCACAA 60.270 52.381 0.00 0.00 0.00 3.33
116 117 0.317160 CCAACTAGTCCGTGCTCACA 59.683 55.000 0.00 0.00 0.00 3.58
125 126 0.912486 ACCTCATGGCCAACTAGTCC 59.088 55.000 10.96 0.00 36.63 3.85
130 131 0.606401 CAACGACCTCATGGCCAACT 60.606 55.000 10.96 0.00 36.63 3.16
135 136 2.740714 GCGACAACGACCTCATGGC 61.741 63.158 0.00 0.00 42.66 4.40
137 138 1.354337 CCAGCGACAACGACCTCATG 61.354 60.000 0.00 0.00 42.66 3.07
138 139 1.079819 CCAGCGACAACGACCTCAT 60.080 57.895 0.00 0.00 42.66 2.90
139 140 2.338620 CCAGCGACAACGACCTCA 59.661 61.111 0.00 0.00 42.66 3.86
140 141 3.112709 GCCAGCGACAACGACCTC 61.113 66.667 0.00 0.00 42.66 3.85
154 155 2.666190 GCTGTTGCTGAGTCGCCA 60.666 61.111 4.84 0.00 36.03 5.69
156 157 1.082496 GTTGCTGTTGCTGAGTCGC 60.082 57.895 0.77 0.77 40.48 5.19
163 164 0.457035 CACACAAGGTTGCTGTTGCT 59.543 50.000 0.00 0.00 40.48 3.91
164 165 0.173255 ACACACAAGGTTGCTGTTGC 59.827 50.000 0.00 0.00 40.20 4.17
171 172 3.694734 GTCAATCACACACACAAGGTTG 58.305 45.455 0.00 0.00 0.00 3.77
172 173 2.354510 CGTCAATCACACACACAAGGTT 59.645 45.455 0.00 0.00 0.00 3.50
174 175 1.939934 ACGTCAATCACACACACAAGG 59.060 47.619 0.00 0.00 0.00 3.61
176 177 1.937223 GGACGTCAATCACACACACAA 59.063 47.619 18.91 0.00 0.00 3.33
284 291 9.591792 GAAAGTTTGAGGTTATAAGGTATACGT 57.408 33.333 0.00 0.00 0.00 3.57
292 299 9.463443 CCTGTTTTGAAAGTTTGAGGTTATAAG 57.537 33.333 0.00 0.00 0.00 1.73
295 302 7.123547 TGACCTGTTTTGAAAGTTTGAGGTTAT 59.876 33.333 0.00 0.00 32.65 1.89
299 306 5.125417 TCTGACCTGTTTTGAAAGTTTGAGG 59.875 40.000 0.00 0.00 0.00 3.86
330 337 9.809096 GATGAAACTGATTTGACTAGAGACATA 57.191 33.333 0.00 0.00 0.00 2.29
339 346 4.990526 ACAGGGATGAAACTGATTTGACT 58.009 39.130 0.00 0.00 38.09 3.41
606 620 8.401709 TGTTTGTGAATTTAAATTTTTGCCTCC 58.598 29.630 14.45 0.72 0.00 4.30
607 621 9.949174 ATGTTTGTGAATTTAAATTTTTGCCTC 57.051 25.926 14.45 1.36 0.00 4.70
672 688 8.105097 TCCGTCAGAAAATTTTGTGAATATGA 57.895 30.769 26.80 18.50 41.32 2.15
685 701 4.918810 AGTTTTGCTTCCGTCAGAAAAT 57.081 36.364 0.00 0.00 32.88 1.82
686 702 5.529430 TCATAGTTTTGCTTCCGTCAGAAAA 59.471 36.000 0.00 0.00 32.88 2.29
690 706 3.997021 AGTCATAGTTTTGCTTCCGTCAG 59.003 43.478 0.00 0.00 0.00 3.51
692 708 4.246458 AGAGTCATAGTTTTGCTTCCGTC 58.754 43.478 0.00 0.00 0.00 4.79
694 710 3.304559 CGAGAGTCATAGTTTTGCTTCCG 59.695 47.826 0.00 0.00 0.00 4.30
695 711 3.062774 GCGAGAGTCATAGTTTTGCTTCC 59.937 47.826 0.00 0.00 0.00 3.46
696 712 3.241804 CGCGAGAGTCATAGTTTTGCTTC 60.242 47.826 0.00 0.00 0.00 3.86
697 713 2.668457 CGCGAGAGTCATAGTTTTGCTT 59.332 45.455 0.00 0.00 0.00 3.91
698 714 2.094700 TCGCGAGAGTCATAGTTTTGCT 60.095 45.455 3.71 0.00 34.84 3.91
699 715 2.259618 TCGCGAGAGTCATAGTTTTGC 58.740 47.619 3.71 0.00 34.84 3.68
700 716 4.621460 TCTTTCGCGAGAGTCATAGTTTTG 59.379 41.667 24.05 0.00 43.69 2.44
701 717 4.806330 TCTTTCGCGAGAGTCATAGTTTT 58.194 39.130 24.05 0.00 43.69 2.43
702 718 4.436242 TCTTTCGCGAGAGTCATAGTTT 57.564 40.909 24.05 0.00 43.69 2.66
704 720 3.190744 TGTTCTTTCGCGAGAGTCATAGT 59.809 43.478 24.05 0.00 43.69 2.12
705 721 3.759418 TGTTCTTTCGCGAGAGTCATAG 58.241 45.455 24.05 8.07 43.69 2.23
707 723 2.724977 TGTTCTTTCGCGAGAGTCAT 57.275 45.000 24.05 0.00 43.69 3.06
709 725 3.854286 TTTTGTTCTTTCGCGAGAGTC 57.146 42.857 24.05 18.25 43.69 3.36
764 1034 6.713450 ACCGGTCTTCTTTAGCTTTTTGATTA 59.287 34.615 0.00 0.00 0.00 1.75
765 1035 5.535030 ACCGGTCTTCTTTAGCTTTTTGATT 59.465 36.000 0.00 0.00 0.00 2.57
768 1038 4.537015 CACCGGTCTTCTTTAGCTTTTTG 58.463 43.478 2.59 0.00 0.00 2.44
769 1039 3.568430 CCACCGGTCTTCTTTAGCTTTTT 59.432 43.478 2.59 0.00 0.00 1.94
771 1041 2.370849 TCCACCGGTCTTCTTTAGCTTT 59.629 45.455 2.59 0.00 0.00 3.51
772 1042 1.975680 TCCACCGGTCTTCTTTAGCTT 59.024 47.619 2.59 0.00 0.00 3.74
773 1043 1.640917 TCCACCGGTCTTCTTTAGCT 58.359 50.000 2.59 0.00 0.00 3.32
774 1044 2.467566 TTCCACCGGTCTTCTTTAGC 57.532 50.000 2.59 0.00 0.00 3.09
775 1045 4.131596 TGTTTTCCACCGGTCTTCTTTAG 58.868 43.478 2.59 0.00 0.00 1.85
776 1046 4.153673 TGTTTTCCACCGGTCTTCTTTA 57.846 40.909 2.59 0.00 0.00 1.85
780 1050 3.786516 TTTTGTTTTCCACCGGTCTTC 57.213 42.857 2.59 0.00 0.00 2.87
782 1052 3.028130 ACATTTTGTTTTCCACCGGTCT 58.972 40.909 2.59 0.00 0.00 3.85
784 1054 3.195825 TCAACATTTTGTTTTCCACCGGT 59.804 39.130 0.00 0.00 38.77 5.28
785 1055 3.786635 TCAACATTTTGTTTTCCACCGG 58.213 40.909 0.00 0.00 38.77 5.28
786 1056 5.786401 TTTCAACATTTTGTTTTCCACCG 57.214 34.783 0.00 0.00 38.77 4.94
808 1078 8.182881 GCTTTTTAAACGGTTATTTTGGGTTTT 58.817 29.630 0.00 0.00 33.35 2.43
809 1079 7.201714 GGCTTTTTAAACGGTTATTTTGGGTTT 60.202 33.333 0.00 0.00 35.28 3.27
810 1080 6.260493 GGCTTTTTAAACGGTTATTTTGGGTT 59.740 34.615 0.00 0.00 0.00 4.11
811 1081 5.759273 GGCTTTTTAAACGGTTATTTTGGGT 59.241 36.000 0.00 0.00 0.00 4.51
812 1082 5.758784 TGGCTTTTTAAACGGTTATTTTGGG 59.241 36.000 0.00 0.00 0.00 4.12
813 1083 6.846325 TGGCTTTTTAAACGGTTATTTTGG 57.154 33.333 0.00 0.00 0.00 3.28
814 1084 9.556030 TTTTTGGCTTTTTAAACGGTTATTTTG 57.444 25.926 0.00 0.00 0.00 2.44
816 1086 9.723447 CATTTTTGGCTTTTTAAACGGTTATTT 57.277 25.926 0.00 0.00 0.00 1.40
817 1087 7.858382 GCATTTTTGGCTTTTTAAACGGTTATT 59.142 29.630 0.00 0.00 0.00 1.40
818 1088 7.012421 TGCATTTTTGGCTTTTTAAACGGTTAT 59.988 29.630 0.00 0.00 0.00 1.89
819 1089 6.315393 TGCATTTTTGGCTTTTTAAACGGTTA 59.685 30.769 0.00 0.00 0.00 2.85
820 1090 5.123979 TGCATTTTTGGCTTTTTAAACGGTT 59.876 32.000 0.00 0.00 0.00 4.44
821 1091 4.636206 TGCATTTTTGGCTTTTTAAACGGT 59.364 33.333 0.00 0.00 0.00 4.83
822 1092 5.162000 TGCATTTTTGGCTTTTTAAACGG 57.838 34.783 0.00 0.00 0.00 4.44
823 1093 6.140422 CACATGCATTTTTGGCTTTTTAAACG 59.860 34.615 0.00 0.00 0.00 3.60
824 1094 6.417339 CCACATGCATTTTTGGCTTTTTAAAC 59.583 34.615 0.00 0.00 0.00 2.01
825 1095 6.319658 TCCACATGCATTTTTGGCTTTTTAAA 59.680 30.769 12.23 0.00 0.00 1.52
826 1096 5.824624 TCCACATGCATTTTTGGCTTTTTAA 59.175 32.000 12.23 0.00 0.00 1.52
827 1097 5.371526 TCCACATGCATTTTTGGCTTTTTA 58.628 33.333 12.23 0.00 0.00 1.52
828 1098 4.205587 TCCACATGCATTTTTGGCTTTTT 58.794 34.783 12.23 0.00 0.00 1.94
829 1099 3.818180 TCCACATGCATTTTTGGCTTTT 58.182 36.364 12.23 0.00 0.00 2.27
830 1100 3.488778 TCCACATGCATTTTTGGCTTT 57.511 38.095 12.23 0.00 0.00 3.51
831 1101 3.488778 TTCCACATGCATTTTTGGCTT 57.511 38.095 12.23 0.00 0.00 4.35
832 1102 3.488778 TTTCCACATGCATTTTTGGCT 57.511 38.095 12.23 0.00 0.00 4.75
833 1103 4.769859 ATTTTCCACATGCATTTTTGGC 57.230 36.364 12.23 0.00 0.00 4.52
857 1127 8.264347 TGGGCTTTTTCTCTAGATTTTGTTTTT 58.736 29.630 0.00 0.00 0.00 1.94
858 1128 7.791029 TGGGCTTTTTCTCTAGATTTTGTTTT 58.209 30.769 0.00 0.00 0.00 2.43
859 1129 7.287696 TCTGGGCTTTTTCTCTAGATTTTGTTT 59.712 33.333 0.00 0.00 0.00 2.83
860 1130 6.777580 TCTGGGCTTTTTCTCTAGATTTTGTT 59.222 34.615 0.00 0.00 0.00 2.83
861 1131 6.306987 TCTGGGCTTTTTCTCTAGATTTTGT 58.693 36.000 0.00 0.00 0.00 2.83
862 1132 6.624642 GCTCTGGGCTTTTTCTCTAGATTTTG 60.625 42.308 0.00 0.00 38.06 2.44
863 1133 5.417266 GCTCTGGGCTTTTTCTCTAGATTTT 59.583 40.000 0.00 0.00 38.06 1.82
864 1134 4.946772 GCTCTGGGCTTTTTCTCTAGATTT 59.053 41.667 0.00 0.00 38.06 2.17
865 1135 4.522114 GCTCTGGGCTTTTTCTCTAGATT 58.478 43.478 0.00 0.00 38.06 2.40
866 1136 3.431486 CGCTCTGGGCTTTTTCTCTAGAT 60.431 47.826 0.00 0.00 39.13 1.98
867 1137 2.093973 CGCTCTGGGCTTTTTCTCTAGA 60.094 50.000 0.00 0.00 39.13 2.43
868 1138 2.093973 TCGCTCTGGGCTTTTTCTCTAG 60.094 50.000 0.00 0.00 39.13 2.43
869 1139 1.899814 TCGCTCTGGGCTTTTTCTCTA 59.100 47.619 0.00 0.00 39.13 2.43
870 1140 0.687354 TCGCTCTGGGCTTTTTCTCT 59.313 50.000 0.00 0.00 39.13 3.10
871 1141 0.799393 GTCGCTCTGGGCTTTTTCTC 59.201 55.000 0.00 0.00 39.13 2.87
872 1142 0.108585 TGTCGCTCTGGGCTTTTTCT 59.891 50.000 0.00 0.00 39.13 2.52
873 1143 0.519077 CTGTCGCTCTGGGCTTTTTC 59.481 55.000 0.00 0.00 39.13 2.29
874 1144 0.890996 CCTGTCGCTCTGGGCTTTTT 60.891 55.000 0.00 0.00 39.13 1.94
875 1145 1.302832 CCTGTCGCTCTGGGCTTTT 60.303 57.895 0.00 0.00 39.13 2.27
876 1146 2.348998 CCTGTCGCTCTGGGCTTT 59.651 61.111 0.00 0.00 39.13 3.51
877 1147 2.925170 ACCTGTCGCTCTGGGCTT 60.925 61.111 0.00 0.00 39.12 4.35
878 1148 3.699894 CACCTGTCGCTCTGGGCT 61.700 66.667 0.00 0.00 39.12 5.19
879 1149 3.941657 GACACCTGTCGCTCTGGGC 62.942 68.421 0.00 0.00 39.12 5.36
880 1150 2.262915 GACACCTGTCGCTCTGGG 59.737 66.667 7.84 0.00 39.12 4.45
888 1158 2.380084 TTAGCCATTCGACACCTGTC 57.620 50.000 0.00 0.00 41.47 3.51
889 1159 2.851263 TTTAGCCATTCGACACCTGT 57.149 45.000 0.00 0.00 0.00 4.00
890 1160 3.666902 CGTTTTTAGCCATTCGACACCTG 60.667 47.826 0.00 0.00 0.00 4.00
891 1161 2.482721 CGTTTTTAGCCATTCGACACCT 59.517 45.455 0.00 0.00 0.00 4.00
892 1162 2.846693 CGTTTTTAGCCATTCGACACC 58.153 47.619 0.00 0.00 0.00 4.16
893 1163 2.239201 GCGTTTTTAGCCATTCGACAC 58.761 47.619 0.00 0.00 0.00 3.67
894 1164 1.136197 CGCGTTTTTAGCCATTCGACA 60.136 47.619 0.00 0.00 0.00 4.35
895 1165 1.520368 CGCGTTTTTAGCCATTCGAC 58.480 50.000 0.00 0.00 0.00 4.20
896 1166 0.179210 GCGCGTTTTTAGCCATTCGA 60.179 50.000 8.43 0.00 0.00 3.71
897 1167 2.265446 GCGCGTTTTTAGCCATTCG 58.735 52.632 8.43 0.00 0.00 3.34
903 1173 1.001745 CCACTTGGCGCGTTTTTAGC 61.002 55.000 8.43 0.00 0.00 3.09
904 1174 3.086161 CCACTTGGCGCGTTTTTAG 57.914 52.632 8.43 1.04 0.00 1.85
915 1185 2.034879 AACGATCAGCGCCACTTGG 61.035 57.895 2.29 0.00 46.04 3.61
916 1186 1.133253 CAACGATCAGCGCCACTTG 59.867 57.895 2.29 0.00 46.04 3.16
917 1187 2.680913 GCAACGATCAGCGCCACTT 61.681 57.895 2.29 0.00 46.04 3.16
918 1188 3.121030 GCAACGATCAGCGCCACT 61.121 61.111 2.29 0.00 46.04 4.00
924 1194 0.095417 GAAACCTCGCAACGATCAGC 59.905 55.000 0.00 0.00 34.61 4.26
925 1195 0.721718 GGAAACCTCGCAACGATCAG 59.278 55.000 0.00 0.00 34.61 2.90
926 1196 0.034198 TGGAAACCTCGCAACGATCA 59.966 50.000 0.00 0.00 34.61 2.92
927 1197 1.153353 TTGGAAACCTCGCAACGATC 58.847 50.000 0.00 0.00 34.61 3.69
928 1198 1.535462 CTTTGGAAACCTCGCAACGAT 59.465 47.619 0.00 0.00 34.61 3.73
929 1199 0.941542 CTTTGGAAACCTCGCAACGA 59.058 50.000 0.00 0.00 0.00 3.85
930 1200 0.040425 CCTTTGGAAACCTCGCAACG 60.040 55.000 0.00 0.00 0.00 4.10
931 1201 1.266989 CTCCTTTGGAAACCTCGCAAC 59.733 52.381 0.00 0.00 0.00 4.17
932 1202 1.604604 CTCCTTTGGAAACCTCGCAA 58.395 50.000 0.00 0.00 0.00 4.85
933 1203 0.889186 GCTCCTTTGGAAACCTCGCA 60.889 55.000 0.00 0.00 0.00 5.10
934 1204 1.876664 GCTCCTTTGGAAACCTCGC 59.123 57.895 0.00 0.00 0.00 5.03
935 1205 1.912371 GCGCTCCTTTGGAAACCTCG 61.912 60.000 0.00 0.00 0.00 4.63
936 1206 0.606673 AGCGCTCCTTTGGAAACCTC 60.607 55.000 2.64 0.00 0.00 3.85
937 1207 0.178990 AAGCGCTCCTTTGGAAACCT 60.179 50.000 12.06 0.00 0.00 3.50
938 1208 0.039165 CAAGCGCTCCTTTGGAAACC 60.039 55.000 12.06 0.00 0.00 3.27
939 1209 0.668535 ACAAGCGCTCCTTTGGAAAC 59.331 50.000 12.06 0.00 0.00 2.78
940 1210 1.398692 AACAAGCGCTCCTTTGGAAA 58.601 45.000 12.06 0.00 0.00 3.13
941 1211 2.264005 TAACAAGCGCTCCTTTGGAA 57.736 45.000 12.06 0.00 0.00 3.53
942 1212 1.877443 GTTAACAAGCGCTCCTTTGGA 59.123 47.619 12.06 0.00 0.00 3.53
943 1213 1.606668 TGTTAACAAGCGCTCCTTTGG 59.393 47.619 12.06 0.00 0.00 3.28
944 1214 3.300009 CTTGTTAACAAGCGCTCCTTTG 58.700 45.455 29.92 8.04 45.59 2.77
945 1215 3.626028 CTTGTTAACAAGCGCTCCTTT 57.374 42.857 29.92 6.88 45.59 3.11
955 1225 3.366396 TGGGGAAGCAACTTGTTAACAA 58.634 40.909 19.53 19.53 0.00 2.83
956 1226 2.955660 CTGGGGAAGCAACTTGTTAACA 59.044 45.455 3.59 3.59 0.00 2.41
957 1227 3.219281 TCTGGGGAAGCAACTTGTTAAC 58.781 45.455 0.00 0.00 0.00 2.01
958 1228 3.586470 TCTGGGGAAGCAACTTGTTAA 57.414 42.857 0.00 0.00 0.00 2.01
959 1229 3.806949 ATCTGGGGAAGCAACTTGTTA 57.193 42.857 0.00 0.00 0.00 2.41
960 1230 2.629617 CAATCTGGGGAAGCAACTTGTT 59.370 45.455 0.00 0.00 0.00 2.83
961 1231 2.242043 CAATCTGGGGAAGCAACTTGT 58.758 47.619 0.00 0.00 0.00 3.16
962 1232 2.242043 ACAATCTGGGGAAGCAACTTG 58.758 47.619 0.00 0.00 0.00 3.16
963 1233 2.683211 ACAATCTGGGGAAGCAACTT 57.317 45.000 0.00 0.00 0.00 2.66
964 1234 2.290960 GGTACAATCTGGGGAAGCAACT 60.291 50.000 0.00 0.00 0.00 3.16
965 1235 2.092323 GGTACAATCTGGGGAAGCAAC 58.908 52.381 0.00 0.00 0.00 4.17
966 1236 1.005450 GGGTACAATCTGGGGAAGCAA 59.995 52.381 0.00 0.00 0.00 3.91
967 1237 0.623723 GGGTACAATCTGGGGAAGCA 59.376 55.000 0.00 0.00 0.00 3.91
968 1238 0.919710 AGGGTACAATCTGGGGAAGC 59.080 55.000 0.00 0.00 0.00 3.86
969 1239 2.102588 CGTAGGGTACAATCTGGGGAAG 59.897 54.545 0.00 0.00 0.00 3.46
970 1240 2.112998 CGTAGGGTACAATCTGGGGAA 58.887 52.381 0.00 0.00 0.00 3.97
971 1241 1.784358 CGTAGGGTACAATCTGGGGA 58.216 55.000 0.00 0.00 0.00 4.81
972 1242 0.106149 GCGTAGGGTACAATCTGGGG 59.894 60.000 0.00 0.00 0.00 4.96
973 1243 0.106149 GGCGTAGGGTACAATCTGGG 59.894 60.000 0.00 0.00 0.00 4.45
974 1244 1.120530 AGGCGTAGGGTACAATCTGG 58.879 55.000 0.00 0.00 0.00 3.86
975 1245 2.691526 TGTAGGCGTAGGGTACAATCTG 59.308 50.000 0.00 0.00 0.00 2.90
976 1246 3.022557 TGTAGGCGTAGGGTACAATCT 57.977 47.619 0.00 0.00 0.00 2.40
977 1247 3.806625 TTGTAGGCGTAGGGTACAATC 57.193 47.619 0.00 0.00 32.90 2.67
978 1248 3.261390 TGTTTGTAGGCGTAGGGTACAAT 59.739 43.478 0.00 0.00 36.73 2.71
979 1249 2.632028 TGTTTGTAGGCGTAGGGTACAA 59.368 45.455 0.00 0.00 35.39 2.41
980 1250 2.246469 TGTTTGTAGGCGTAGGGTACA 58.754 47.619 0.00 0.00 0.00 2.90
981 1251 3.192466 CATGTTTGTAGGCGTAGGGTAC 58.808 50.000 0.00 0.00 0.00 3.34
982 1252 2.168936 CCATGTTTGTAGGCGTAGGGTA 59.831 50.000 0.00 0.00 0.00 3.69
983 1253 1.065709 CCATGTTTGTAGGCGTAGGGT 60.066 52.381 0.00 0.00 0.00 4.34
984 1254 1.663695 CCATGTTTGTAGGCGTAGGG 58.336 55.000 0.00 0.00 0.00 3.53
1000 1270 1.270839 CCCATTAACTCCGATCGCCAT 60.271 52.381 10.32 0.00 0.00 4.40
1004 1274 0.105964 TGGCCCATTAACTCCGATCG 59.894 55.000 8.51 8.51 0.00 3.69
1021 1291 2.954684 TTGGCGTAGGGTGAGCTGG 61.955 63.158 0.00 0.00 0.00 4.85
1023 1293 2.663196 GTTGGCGTAGGGTGAGCT 59.337 61.111 0.00 0.00 0.00 4.09
1026 1296 2.652530 GTCGTTGGCGTAGGGTGA 59.347 61.111 0.00 0.00 39.49 4.02
1140 1414 2.113807 GTTAGGATTACACCCTCCCGT 58.886 52.381 0.00 0.00 35.30 5.28
1150 1424 2.744166 GCCTCCCGGTTGTTAGGATTAC 60.744 54.545 0.00 0.00 0.00 1.89
1177 1451 3.386237 GGCGGAGAGACCTGCAGT 61.386 66.667 13.81 0.11 38.95 4.40
1292 1573 0.829333 CTCTGTGAGCACTATGCCCT 59.171 55.000 1.99 0.00 46.52 5.19
1457 1830 7.598759 AAAGGACCTACATCTACGTATCATT 57.401 36.000 0.00 0.00 0.00 2.57
1463 1836 8.937207 AGAATATAAAGGACCTACATCTACGT 57.063 34.615 0.00 0.00 0.00 3.57
1598 1971 4.685628 CGTTTCATAAACTGCAAGCCAAAT 59.314 37.500 0.00 0.00 39.23 2.32
1608 1981 5.685068 TGCACAACAATCGTTTCATAAACTG 59.315 36.000 1.49 0.00 39.23 3.16
1644 2100 4.466828 CCAAAGCATGAGTTTAAGTCACG 58.533 43.478 4.46 0.00 29.04 4.35
1710 2166 4.385748 GTCATGTTATCATCAAGCGCGATA 59.614 41.667 12.10 0.00 31.15 2.92
1828 2287 9.175312 AGAAATGGCAAATGATATCAGCTATAG 57.825 33.333 11.78 0.00 0.00 1.31
1928 2422 5.418840 ACACTTGGCTTGGATAAAATAGTGG 59.581 40.000 0.00 0.00 35.88 4.00
1947 2441 8.682710 ACACTTATGAACATGTACAAAACACTT 58.317 29.630 0.00 0.00 42.09 3.16
2072 2567 2.112998 CGGTATTGGAGTTGAGGGGTA 58.887 52.381 0.00 0.00 0.00 3.69
2109 2611 6.205464 TGAATTCTAGCCAGTTTTGAGAGTTG 59.795 38.462 7.05 0.00 0.00 3.16
2122 2624 2.505819 GGGGAGAGTTGAATTCTAGCCA 59.494 50.000 7.05 0.00 0.00 4.75
2236 2754 7.271008 GTGCAAAAACTTGGAACTTTTTGAATG 59.729 33.333 16.12 0.00 44.68 2.67
2732 3284 5.337813 CCAATACCGTCTAATATACACCCCC 60.338 48.000 0.00 0.00 0.00 5.40
2817 3371 5.045578 ACACTTGGGAGCTAAGAACATGTAT 60.046 40.000 0.00 0.00 0.00 2.29
2818 3372 4.286032 ACACTTGGGAGCTAAGAACATGTA 59.714 41.667 0.00 0.00 0.00 2.29
2819 3373 3.073062 ACACTTGGGAGCTAAGAACATGT 59.927 43.478 1.70 0.00 0.00 3.21
2820 3374 3.679389 ACACTTGGGAGCTAAGAACATG 58.321 45.455 1.70 0.00 0.00 3.21
2821 3375 4.323562 GGTACACTTGGGAGCTAAGAACAT 60.324 45.833 1.70 0.00 0.00 2.71
2822 3376 3.007614 GGTACACTTGGGAGCTAAGAACA 59.992 47.826 1.70 0.00 0.00 3.18
2823 3377 3.007614 TGGTACACTTGGGAGCTAAGAAC 59.992 47.826 1.70 0.00 0.00 3.01
2891 3445 9.612620 GGAAACTATAAAATGTCACAAGTTCAG 57.387 33.333 0.00 0.00 0.00 3.02
2919 3473 0.627451 AGATTGGCTGGGATTGCTGA 59.373 50.000 0.00 0.00 0.00 4.26
2929 3483 2.715046 TCCAAGTGCTTAGATTGGCTG 58.285 47.619 6.47 0.00 42.65 4.85
2930 3484 3.439857 TTCCAAGTGCTTAGATTGGCT 57.560 42.857 6.47 0.00 42.65 4.75
2963 3517 7.309920 CAGATGTCAGAGATGTCAGATAGATG 58.690 42.308 0.00 0.00 0.00 2.90
2964 3518 6.434965 CCAGATGTCAGAGATGTCAGATAGAT 59.565 42.308 0.00 0.00 0.00 1.98
3092 3646 1.069049 GCAAATTGGTGCACAAGGTCT 59.931 47.619 20.43 0.00 43.48 3.85
3111 3665 7.980099 ACAAGTATGACATACCAGTAAACTAGC 59.020 37.037 19.76 0.00 36.40 3.42
3141 3697 1.897423 CGTACCATCCTCCTGCACA 59.103 57.895 0.00 0.00 0.00 4.57
3318 3877 8.669243 GTGTTGATATTATAGAATAAGCTGCCC 58.331 37.037 0.00 0.00 31.28 5.36
3367 3926 1.275573 ACGGCTAAACTCACCTCTTCC 59.724 52.381 0.00 0.00 0.00 3.46
3447 4009 8.333235 AGACCTTCATAGAGTATAGGATCGATT 58.667 37.037 0.00 0.00 0.00 3.34
3553 4117 6.295249 TGAATATACCAAATCGGATTGCTCA 58.705 36.000 3.59 0.00 38.63 4.26
3586 4150 6.328672 AGCAAGAGTTATTGGAGATCAGGTAT 59.671 38.462 0.00 0.00 0.00 2.73
3832 4544 7.173218 AGAGATAAATATTGGCACATACAACGG 59.827 37.037 0.00 0.00 39.30 4.44
3899 4611 1.485124 TCATCAGAAGCGGCTTCCTA 58.515 50.000 32.81 23.47 40.98 2.94
3973 4685 8.515414 GGCAATAAGAAGTGTAGAAATCAAACT 58.485 33.333 0.00 0.00 0.00 2.66
4028 4740 7.854337 AGGGTTTTGCATGATATCAAAAGATT 58.146 30.769 9.99 0.00 41.20 2.40
4524 5238 5.585844 TGTCAGAGTACGATATTTCACGGTA 59.414 40.000 0.00 0.00 0.00 4.02
4721 5435 4.744795 ATGTGCCCTGTTTTTGTTTGTA 57.255 36.364 0.00 0.00 0.00 2.41
4750 5464 4.244066 CATGATTTCAATCGGGTGCAAAA 58.756 39.130 0.00 0.00 38.26 2.44
4754 5468 1.750778 ACCATGATTTCAATCGGGTGC 59.249 47.619 12.50 0.00 41.35 5.01
4755 5469 3.429272 CCAACCATGATTTCAATCGGGTG 60.429 47.826 13.52 9.39 41.77 4.61
4756 5470 2.760092 CCAACCATGATTTCAATCGGGT 59.240 45.455 8.98 8.98 43.34 5.28
4757 5471 2.760092 ACCAACCATGATTTCAATCGGG 59.240 45.455 0.00 7.98 38.26 5.14
4759 5473 5.818136 AGTACCAACCATGATTTCAATCG 57.182 39.130 0.00 0.00 38.26 3.34
5591 6310 9.396022 AGTCTTTTCTAGAGAACAATTCAACAA 57.604 29.630 0.00 0.00 33.13 2.83
5881 6601 8.246180 AGCATGTATTTGGACAATCTTTAACAG 58.754 33.333 0.00 0.00 31.83 3.16
5883 6603 7.009540 GCAGCATGTATTTGGACAATCTTTAAC 59.990 37.037 0.00 0.00 39.31 2.01
6182 6904 7.749570 GCAAGAATAGATCCAATTGATTCATCG 59.250 37.037 7.12 2.34 32.41 3.84
6255 6977 4.327680 AGAAGTCCTGAAATGCTTACACC 58.672 43.478 0.00 0.00 0.00 4.16
6311 7033 4.357325 AGGACAGAGTGGATATCAACAGT 58.643 43.478 12.86 7.71 0.00 3.55
6343 7065 1.004745 AGGAACCATTAGCACTGTGGG 59.995 52.381 10.21 4.26 37.33 4.61
6346 7068 3.679389 CTGAAGGAACCATTAGCACTGT 58.321 45.455 0.00 0.00 0.00 3.55
6392 7114 9.853555 CGCTCAACTCTGATATATATCTCTTTT 57.146 33.333 20.74 8.64 33.88 2.27
6520 7242 7.753132 CAGAATTTCAGACTAGTACTGACTGAC 59.247 40.741 20.89 12.85 42.84 3.51
6521 7243 7.665974 TCAGAATTTCAGACTAGTACTGACTGA 59.334 37.037 22.32 22.32 42.84 3.41
6573 7296 4.331168 GTCGAGATCTGAAGAACCAAATGG 59.669 45.833 0.00 0.00 42.17 3.16
6593 7316 3.288809 TCTATCTTCCATGCATCGTCG 57.711 47.619 0.00 0.00 0.00 5.12
6596 7319 5.107824 CCTGTATCTATCTTCCATGCATCG 58.892 45.833 0.00 0.00 0.00 3.84
6598 7321 5.046014 GGACCTGTATCTATCTTCCATGCAT 60.046 44.000 0.00 0.00 0.00 3.96
6613 7336 1.109920 ATCGAGCAGCGGACCTGTAT 61.110 55.000 0.00 0.00 43.71 2.29
6616 7339 2.584418 CATCGAGCAGCGGACCTG 60.584 66.667 0.00 0.00 44.67 4.00
6618 7341 4.899239 CCCATCGAGCAGCGGACC 62.899 72.222 0.00 0.00 41.33 4.46
6619 7342 2.852495 TTTCCCATCGAGCAGCGGAC 62.852 60.000 0.00 0.00 41.33 4.79
6620 7343 2.578163 CTTTCCCATCGAGCAGCGGA 62.578 60.000 0.00 0.00 41.33 5.54
6638 7361 2.885554 GCCCAAAACTCCCATGATGTCT 60.886 50.000 0.00 0.00 0.00 3.41
6644 7367 0.457035 CGATGCCCAAAACTCCCATG 59.543 55.000 0.00 0.00 0.00 3.66
6658 7381 0.462759 CAAGGGACCTTCTCCGATGC 60.463 60.000 0.00 0.00 40.56 3.91
6680 7403 5.188434 ACATCAATGTGTACCCATTCTCTG 58.812 41.667 0.06 2.41 40.03 3.35
6682 7405 6.404734 GGAAACATCAATGTGTACCCATTCTC 60.405 42.308 0.06 0.00 41.61 2.87
6703 7426 6.208599 GTGATCACTTACAAAGGGAATGGAAA 59.791 38.462 18.83 0.00 45.58 3.13
6894 7621 2.222213 CGCTCACAATGTTAACGTTCCA 59.778 45.455 10.15 3.17 0.00 3.53
6931 7658 6.208797 TCCGGTGGAGTTTGTGATCTATATAG 59.791 42.308 0.00 3.10 0.00 1.31
6934 7661 4.283337 TCCGGTGGAGTTTGTGATCTATA 58.717 43.478 0.00 0.00 0.00 1.31
6953 7680 6.418956 CAAGGAAAAATACACGTATCATCCG 58.581 40.000 0.00 0.00 31.89 4.18
6968 7695 3.244387 GCCCATTAAGCACCAAGGAAAAA 60.244 43.478 0.00 0.00 0.00 1.94
6973 7700 0.324645 AGGCCCATTAAGCACCAAGG 60.325 55.000 0.00 0.00 0.00 3.61
7088 7887 3.195825 CCTCGAAGTCCATTCTAAGTGGT 59.804 47.826 0.00 0.00 37.96 4.16
7096 7895 2.100605 AACAGCCTCGAAGTCCATTC 57.899 50.000 0.00 0.00 34.31 2.67
7118 7917 7.876978 TCCCCTAAAGTTTAGAGAACCTAAA 57.123 36.000 21.81 0.00 43.12 1.85
7136 7935 4.866327 AAACCGGTTAATTGATCCCCTA 57.134 40.909 22.60 0.00 0.00 3.53
7181 7980 4.084287 AGAGCATATGCCCACCATAAATG 58.916 43.478 23.96 0.00 43.38 2.32
7213 8016 7.327214 AGTGTTAGCCTTCTCTCTGAATTTAG 58.673 38.462 0.00 0.00 33.71 1.85
7224 8027 6.762187 GTCCCTTAATTAGTGTTAGCCTTCTC 59.238 42.308 0.00 0.00 0.00 2.87
7241 8044 3.132925 GTGTAGCAAACGTGTCCCTTAA 58.867 45.455 0.00 0.00 0.00 1.85
7242 8045 2.102757 TGTGTAGCAAACGTGTCCCTTA 59.897 45.455 0.00 0.00 0.00 2.69
7243 8046 1.134340 TGTGTAGCAAACGTGTCCCTT 60.134 47.619 0.00 0.00 0.00 3.95
7245 8048 1.463444 GATGTGTAGCAAACGTGTCCC 59.537 52.381 0.00 0.00 0.00 4.46
7246 8049 1.463444 GGATGTGTAGCAAACGTGTCC 59.537 52.381 0.00 0.00 0.00 4.02
7247 8050 1.126113 CGGATGTGTAGCAAACGTGTC 59.874 52.381 0.00 0.00 0.00 3.67
7248 8051 1.144969 CGGATGTGTAGCAAACGTGT 58.855 50.000 0.00 0.00 0.00 4.49
7249 8052 1.136363 CACGGATGTGTAGCAAACGTG 60.136 52.381 0.00 0.00 46.43 4.49
7273 8076 1.065401 GCATTATGCGCACAAGCCTAA 59.935 47.619 14.90 6.82 37.52 2.69
7276 8079 4.002037 GCATTATGCGCACAAGCC 57.998 55.556 14.90 0.00 37.52 4.35
7297 8101 3.138304 TCACAATGGCGACCTTATATGC 58.862 45.455 0.00 0.00 0.00 3.14
7339 8143 9.941325 TGAAACAATGGAAAATATTGCAGTATT 57.059 25.926 8.55 8.55 40.42 1.89
7341 8145 9.368674 CATGAAACAATGGAAAATATTGCAGTA 57.631 29.630 0.00 0.00 40.42 2.74
7342 8146 7.879160 ACATGAAACAATGGAAAATATTGCAGT 59.121 29.630 0.00 0.00 40.42 4.40
7343 8147 8.259049 ACATGAAACAATGGAAAATATTGCAG 57.741 30.769 0.00 0.00 40.42 4.41
7344 8148 8.618702 AACATGAAACAATGGAAAATATTGCA 57.381 26.923 0.00 0.00 41.38 4.08
7349 8153 9.619316 CGTCTAAACATGAAACAATGGAAAATA 57.381 29.630 0.00 0.00 31.46 1.40
7350 8154 8.356657 TCGTCTAAACATGAAACAATGGAAAAT 58.643 29.630 0.00 0.00 31.46 1.82
7351 8155 7.708051 TCGTCTAAACATGAAACAATGGAAAA 58.292 30.769 0.00 0.00 31.46 2.29
7352 8156 7.227711 TCTCGTCTAAACATGAAACAATGGAAA 59.772 33.333 0.00 0.00 31.46 3.13
7353 8157 6.708502 TCTCGTCTAAACATGAAACAATGGAA 59.291 34.615 0.00 0.00 31.46 3.53
7354 8158 6.227522 TCTCGTCTAAACATGAAACAATGGA 58.772 36.000 0.00 0.00 31.46 3.41
7355 8159 6.402550 CCTCTCGTCTAAACATGAAACAATGG 60.403 42.308 0.00 0.00 31.46 3.16
7356 8160 6.368791 TCCTCTCGTCTAAACATGAAACAATG 59.631 38.462 0.00 0.00 0.00 2.82
7357 8161 6.464222 TCCTCTCGTCTAAACATGAAACAAT 58.536 36.000 0.00 0.00 0.00 2.71
7358 8162 5.849510 TCCTCTCGTCTAAACATGAAACAA 58.150 37.500 0.00 0.00 0.00 2.83
7359 8163 5.462530 TCCTCTCGTCTAAACATGAAACA 57.537 39.130 0.00 0.00 0.00 2.83
7360 8164 6.814146 AGAATCCTCTCGTCTAAACATGAAAC 59.186 38.462 0.00 0.00 0.00 2.78
7361 8165 6.936279 AGAATCCTCTCGTCTAAACATGAAA 58.064 36.000 0.00 0.00 0.00 2.69
7362 8166 6.531503 AGAATCCTCTCGTCTAAACATGAA 57.468 37.500 0.00 0.00 0.00 2.57
7363 8167 6.531503 AAGAATCCTCTCGTCTAAACATGA 57.468 37.500 0.00 0.00 0.00 3.07
7364 8168 6.419413 GCTAAGAATCCTCTCGTCTAAACATG 59.581 42.308 0.00 0.00 0.00 3.21
7365 8169 6.508777 GCTAAGAATCCTCTCGTCTAAACAT 58.491 40.000 0.00 0.00 0.00 2.71
7366 8170 5.448768 CGCTAAGAATCCTCTCGTCTAAACA 60.449 44.000 0.00 0.00 0.00 2.83
7367 8171 4.971220 CGCTAAGAATCCTCTCGTCTAAAC 59.029 45.833 0.00 0.00 0.00 2.01
7368 8172 4.036498 CCGCTAAGAATCCTCTCGTCTAAA 59.964 45.833 0.00 0.00 0.00 1.85
7369 8173 3.564644 CCGCTAAGAATCCTCTCGTCTAA 59.435 47.826 0.00 0.00 0.00 2.10
7370 8174 3.139850 CCGCTAAGAATCCTCTCGTCTA 58.860 50.000 0.00 0.00 0.00 2.59
7371 8175 1.950909 CCGCTAAGAATCCTCTCGTCT 59.049 52.381 0.00 0.00 0.00 4.18
7372 8176 1.677052 ACCGCTAAGAATCCTCTCGTC 59.323 52.381 0.00 0.00 0.00 4.20
7373 8177 1.405821 CACCGCTAAGAATCCTCTCGT 59.594 52.381 0.00 0.00 0.00 4.18
7374 8178 1.676529 TCACCGCTAAGAATCCTCTCG 59.323 52.381 0.00 0.00 0.00 4.04
7375 8179 4.329462 AATCACCGCTAAGAATCCTCTC 57.671 45.455 0.00 0.00 0.00 3.20
7376 8180 4.762289 AAATCACCGCTAAGAATCCTCT 57.238 40.909 0.00 0.00 0.00 3.69
7377 8181 6.920569 TTAAAATCACCGCTAAGAATCCTC 57.079 37.500 0.00 0.00 0.00 3.71
7378 8182 7.610305 TCTTTTAAAATCACCGCTAAGAATCCT 59.390 33.333 0.09 0.00 0.00 3.24
7379 8183 7.758495 TCTTTTAAAATCACCGCTAAGAATCC 58.242 34.615 0.09 0.00 0.00 3.01
7380 8184 7.910683 CCTCTTTTAAAATCACCGCTAAGAATC 59.089 37.037 0.09 0.00 0.00 2.52
7381 8185 7.393515 ACCTCTTTTAAAATCACCGCTAAGAAT 59.606 33.333 0.09 0.00 0.00 2.40
7382 8186 6.713450 ACCTCTTTTAAAATCACCGCTAAGAA 59.287 34.615 0.09 0.00 0.00 2.52
7383 8187 6.235664 ACCTCTTTTAAAATCACCGCTAAGA 58.764 36.000 0.09 0.00 0.00 2.10
7384 8188 6.496338 ACCTCTTTTAAAATCACCGCTAAG 57.504 37.500 0.09 0.00 0.00 2.18
7385 8189 7.982761 TTACCTCTTTTAAAATCACCGCTAA 57.017 32.000 0.09 0.00 0.00 3.09
7386 8190 9.841295 ATATTACCTCTTTTAAAATCACCGCTA 57.159 29.630 0.09 0.00 0.00 4.26
7387 8191 8.747538 ATATTACCTCTTTTAAAATCACCGCT 57.252 30.769 0.09 0.00 0.00 5.52
7388 8192 8.617809 TGATATTACCTCTTTTAAAATCACCGC 58.382 33.333 0.09 0.00 0.00 5.68
7389 8193 9.931210 GTGATATTACCTCTTTTAAAATCACCG 57.069 33.333 11.70 0.00 36.37 4.94
7436 8240 4.642437 TGTAGCACCAAACTGAACATTGAA 59.358 37.500 0.00 0.00 0.00 2.69
7438 8242 4.566545 TGTAGCACCAAACTGAACATTG 57.433 40.909 0.00 0.00 0.00 2.82
7439 8243 4.644685 AGTTGTAGCACCAAACTGAACATT 59.355 37.500 0.00 0.00 0.00 2.71
7458 8262 8.582433 ACCACAAATCCGTATTTTTAAAGTTG 57.418 30.769 0.00 0.00 32.87 3.16
7500 8304 6.291743 CGTATTTTGTGACCATATTTGCATGC 60.292 38.462 11.82 11.82 0.00 4.06
7502 8306 5.748152 GCGTATTTTGTGACCATATTTGCAT 59.252 36.000 0.00 0.00 0.00 3.96
7511 8315 0.236187 GCACGCGTATTTTGTGACCA 59.764 50.000 13.44 0.00 35.66 4.02
7527 8331 0.246635 ACACCCTGATACGTCTGCAC 59.753 55.000 0.00 0.00 0.00 4.57
7531 8335 1.687123 GCCATACACCCTGATACGTCT 59.313 52.381 0.00 0.00 0.00 4.18
7551 8355 0.324943 CCACTCACTAACAGGTGGGG 59.675 60.000 0.00 0.00 43.69 4.96
7561 8365 1.877576 CTGAGCGCCACCACTCACTA 61.878 60.000 2.29 0.00 37.99 2.74
7570 8374 1.722011 TTAAGTAAGCTGAGCGCCAC 58.278 50.000 2.29 0.00 40.39 5.01
7576 8380 7.928908 TTGTGCAAAAATTAAGTAAGCTGAG 57.071 32.000 0.00 0.00 0.00 3.35
7579 8383 8.387354 GTGTTTTGTGCAAAAATTAAGTAAGCT 58.613 29.630 2.11 0.00 41.37 3.74
7580 8384 7.638295 GGTGTTTTGTGCAAAAATTAAGTAAGC 59.362 33.333 2.11 0.00 41.37 3.09
7581 8385 8.119845 GGGTGTTTTGTGCAAAAATTAAGTAAG 58.880 33.333 2.11 0.00 41.37 2.34
7582 8386 7.824779 AGGGTGTTTTGTGCAAAAATTAAGTAA 59.175 29.630 2.11 0.00 41.37 2.24
7583 8387 7.331791 AGGGTGTTTTGTGCAAAAATTAAGTA 58.668 30.769 2.11 0.00 41.37 2.24
7587 8391 5.582665 GTGAGGGTGTTTTGTGCAAAAATTA 59.417 36.000 2.11 0.00 41.37 1.40
7588 8392 4.394610 GTGAGGGTGTTTTGTGCAAAAATT 59.605 37.500 2.11 0.00 41.37 1.82
7619 8423 2.411628 TGCAGTACAGTGTGGTTGTT 57.588 45.000 5.88 0.00 0.00 2.83
7621 8425 4.811024 CCTATATGCAGTACAGTGTGGTTG 59.189 45.833 5.88 2.68 0.00 3.77
7622 8426 4.683400 GCCTATATGCAGTACAGTGTGGTT 60.683 45.833 5.88 0.00 0.00 3.67
7623 8427 3.181465 GCCTATATGCAGTACAGTGTGGT 60.181 47.826 5.88 0.00 0.00 4.16
7624 8428 3.181466 TGCCTATATGCAGTACAGTGTGG 60.181 47.826 5.88 0.00 36.04 4.17
7625 8429 3.804325 GTGCCTATATGCAGTACAGTGTG 59.196 47.826 5.88 0.00 43.02 3.82
7627 8431 3.052745 CGTGCCTATATGCAGTACAGTG 58.947 50.000 2.61 0.00 43.02 3.66
7628 8432 2.693591 ACGTGCCTATATGCAGTACAGT 59.306 45.455 2.61 0.00 43.02 3.55
7629 8433 3.371102 ACGTGCCTATATGCAGTACAG 57.629 47.619 2.61 0.00 43.02 2.74
7630 8434 4.922471 TTACGTGCCTATATGCAGTACA 57.078 40.909 2.61 0.00 43.02 2.90
7631 8435 5.694910 ACATTTACGTGCCTATATGCAGTAC 59.305 40.000 2.61 0.00 43.02 2.73
7632 8436 5.849510 ACATTTACGTGCCTATATGCAGTA 58.150 37.500 2.61 5.78 43.02 2.74
7633 8437 4.703897 ACATTTACGTGCCTATATGCAGT 58.296 39.130 2.61 6.63 43.02 4.40
7635 8439 5.586643 TCAAACATTTACGTGCCTATATGCA 59.413 36.000 0.00 0.00 39.37 3.96
7636 8440 6.055231 TCAAACATTTACGTGCCTATATGC 57.945 37.500 0.00 0.00 0.00 3.14
7637 8441 9.169468 GAATTCAAACATTTACGTGCCTATATG 57.831 33.333 0.00 0.00 0.00 1.78
7638 8442 8.898761 TGAATTCAAACATTTACGTGCCTATAT 58.101 29.630 5.45 0.00 0.00 0.86
7639 8443 8.270080 TGAATTCAAACATTTACGTGCCTATA 57.730 30.769 5.45 0.00 0.00 1.31
7640 8444 7.151999 TGAATTCAAACATTTACGTGCCTAT 57.848 32.000 5.45 0.00 0.00 2.57
7641 8445 6.561737 TGAATTCAAACATTTACGTGCCTA 57.438 33.333 5.45 0.00 0.00 3.93
7642 8446 5.446143 TGAATTCAAACATTTACGTGCCT 57.554 34.783 5.45 0.00 0.00 4.75
7643 8447 5.861251 TGATGAATTCAAACATTTACGTGCC 59.139 36.000 13.09 0.00 0.00 5.01
7644 8448 6.926280 TGATGAATTCAAACATTTACGTGC 57.074 33.333 13.09 0.00 0.00 5.34
7647 8451 9.253275 GCAAAATGATGAATTCAAACATTTACG 57.747 29.630 32.40 28.55 41.31 3.18
7691 9194 5.462068 CGAATCCAAAATGTATAGACTCGCA 59.538 40.000 0.00 0.00 0.00 5.10
7692 9195 5.462398 ACGAATCCAAAATGTATAGACTCGC 59.538 40.000 0.00 0.00 0.00 5.03
7734 9240 9.405587 AGTTAATACCGACATTGAAAATGTTTG 57.594 29.630 7.03 4.68 31.52 2.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.