Multiple sequence alignment - TraesCS2A01G178800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G178800 chr2A 100.000 3914 0 0 1 3914 137566927 137563014 0.000000e+00 7228.0
1 TraesCS2A01G178800 chr2A 78.859 596 103 21 7 586 764672999 764673587 7.940000e-102 381.0
2 TraesCS2A01G178800 chr2A 76.672 583 84 26 130 705 624947253 624946716 3.850000e-70 276.0
3 TraesCS2A01G178800 chr7B 94.382 1958 94 12 975 2928 513958313 513956368 0.000000e+00 2992.0
4 TraesCS2A01G178800 chr7B 82.009 428 75 2 2468 2894 513770307 513769881 2.870000e-96 363.0
5 TraesCS2A01G178800 chr7B 76.471 187 31 7 776 949 328829139 328828953 5.390000e-14 89.8
6 TraesCS2A01G178800 chr7D 94.088 1184 59 7 975 2151 486169126 486167947 0.000000e+00 1788.0
7 TraesCS2A01G178800 chr7D 94.767 707 33 4 2223 2928 486167965 486167262 0.000000e+00 1098.0
8 TraesCS2A01G178800 chr7D 78.617 622 110 17 2288 2894 486106938 486106325 1.320000e-104 390.0
9 TraesCS2A01G178800 chr7D 90.769 260 23 1 3254 3513 577217654 577217396 2.890000e-91 346.0
10 TraesCS2A01G178800 chr7D 90.421 261 24 1 3254 3514 632827503 632827762 3.740000e-90 342.0
11 TraesCS2A01G178800 chr7D 77.844 167 23 8 799 952 638071388 638071223 1.500000e-14 91.6
12 TraesCS2A01G178800 chr7A 87.007 1039 111 16 2219 3254 554501811 554500794 0.000000e+00 1149.0
13 TraesCS2A01G178800 chr7A 85.978 920 105 15 975 1886 554502784 554501881 0.000000e+00 963.0
14 TraesCS2A01G178800 chr7A 91.282 390 25 6 3514 3895 554500801 554500413 1.250000e-144 523.0
15 TraesCS2A01G178800 chr7A 79.859 427 82 4 2470 2894 554490271 554489847 3.800000e-80 309.0
16 TraesCS2A01G178800 chr7A 75.620 726 111 35 7 715 164821013 164820337 2.290000e-77 300.0
17 TraesCS2A01G178800 chr7A 100.000 32 0 0 919 950 580681713 580681744 4.220000e-05 60.2
18 TraesCS2A01G178800 chr6D 79.944 708 103 21 7 699 61168787 61169470 5.880000e-133 484.0
19 TraesCS2A01G178800 chr6D 91.188 261 22 1 3255 3515 431064308 431064567 1.730000e-93 353.0
20 TraesCS2A01G178800 chr6D 90.661 257 24 0 3258 3514 6322287 6322031 3.740000e-90 342.0
21 TraesCS2A01G178800 chr6D 90.698 258 23 1 3255 3512 445268810 445269066 3.740000e-90 342.0
22 TraesCS2A01G178800 chr2D 81.281 609 90 20 4 601 472480618 472480023 4.580000e-129 472.0
23 TraesCS2A01G178800 chr2D 79.136 671 115 22 4 659 572259093 572258433 1.290000e-119 440.0
24 TraesCS2A01G178800 chr2D 78.982 609 112 15 103 704 470061427 470062026 6.090000e-108 401.0
25 TraesCS2A01G178800 chr2D 84.536 97 13 2 610 704 43234829 43234925 1.160000e-15 95.3
26 TraesCS2A01G178800 chr2D 85.484 62 9 0 895 956 593367382 593367443 9.080000e-07 65.8
27 TraesCS2A01G178800 chr1D 77.935 707 116 23 7 704 493734834 493735509 4.710000e-109 405.0
28 TraesCS2A01G178800 chr1D 79.549 577 90 20 7 577 41762368 41762922 1.710000e-103 387.0
29 TraesCS2A01G178800 chr5B 77.437 718 130 25 7 712 92199752 92200449 2.190000e-107 399.0
30 TraesCS2A01G178800 chr5B 78.179 637 120 15 8 632 13502825 13503454 4.740000e-104 388.0
31 TraesCS2A01G178800 chr4A 94.231 260 14 1 3254 3513 18278414 18278156 2.830000e-106 396.0
32 TraesCS2A01G178800 chr4A 96.875 32 1 0 917 948 591857538 591857507 2.000000e-03 54.7
33 TraesCS2A01G178800 chr2B 78.333 600 101 25 4 586 647333268 647332681 1.030000e-95 361.0
34 TraesCS2A01G178800 chr2B 72.624 705 114 40 8 704 142901263 142900630 4.050000e-35 159.0
35 TraesCS2A01G178800 chr5D 91.538 260 21 1 3255 3514 24569932 24570190 1.340000e-94 357.0
36 TraesCS2A01G178800 chr5D 80.892 157 22 7 552 704 428517943 428517791 2.470000e-22 117.0
37 TraesCS2A01G178800 chr3D 91.188 261 22 1 3255 3515 17649651 17649910 1.730000e-93 353.0
38 TraesCS2A01G178800 chr3D 90.421 261 24 1 3254 3514 565163417 565163676 3.740000e-90 342.0
39 TraesCS2A01G178800 chr1B 74.929 702 112 28 8 700 531104308 531104954 3.000000e-66 263.0
40 TraesCS2A01G178800 chr1B 75.956 183 32 8 776 951 218510351 218510174 2.510000e-12 84.2
41 TraesCS2A01G178800 chr3B 77.193 171 25 6 793 950 400009831 400010000 1.940000e-13 87.9
42 TraesCS2A01G178800 chr6B 100.000 28 0 0 917 944 9758605 9758632 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G178800 chr2A 137563014 137566927 3913 True 7228.000000 7228 100.0000 1 3914 1 chr2A.!!$R1 3913
1 TraesCS2A01G178800 chr2A 764672999 764673587 588 False 381.000000 381 78.8590 7 586 1 chr2A.!!$F1 579
2 TraesCS2A01G178800 chr2A 624946716 624947253 537 True 276.000000 276 76.6720 130 705 1 chr2A.!!$R2 575
3 TraesCS2A01G178800 chr7B 513956368 513958313 1945 True 2992.000000 2992 94.3820 975 2928 1 chr7B.!!$R3 1953
4 TraesCS2A01G178800 chr7D 486167262 486169126 1864 True 1443.000000 1788 94.4275 975 2928 2 chr7D.!!$R4 1953
5 TraesCS2A01G178800 chr7D 486106325 486106938 613 True 390.000000 390 78.6170 2288 2894 1 chr7D.!!$R1 606
6 TraesCS2A01G178800 chr7A 554500413 554502784 2371 True 878.333333 1149 88.0890 975 3895 3 chr7A.!!$R3 2920
7 TraesCS2A01G178800 chr7A 164820337 164821013 676 True 300.000000 300 75.6200 7 715 1 chr7A.!!$R1 708
8 TraesCS2A01G178800 chr6D 61168787 61169470 683 False 484.000000 484 79.9440 7 699 1 chr6D.!!$F1 692
9 TraesCS2A01G178800 chr2D 472480023 472480618 595 True 472.000000 472 81.2810 4 601 1 chr2D.!!$R1 597
10 TraesCS2A01G178800 chr2D 572258433 572259093 660 True 440.000000 440 79.1360 4 659 1 chr2D.!!$R2 655
11 TraesCS2A01G178800 chr2D 470061427 470062026 599 False 401.000000 401 78.9820 103 704 1 chr2D.!!$F2 601
12 TraesCS2A01G178800 chr1D 493734834 493735509 675 False 405.000000 405 77.9350 7 704 1 chr1D.!!$F2 697
13 TraesCS2A01G178800 chr1D 41762368 41762922 554 False 387.000000 387 79.5490 7 577 1 chr1D.!!$F1 570
14 TraesCS2A01G178800 chr5B 92199752 92200449 697 False 399.000000 399 77.4370 7 712 1 chr5B.!!$F2 705
15 TraesCS2A01G178800 chr5B 13502825 13503454 629 False 388.000000 388 78.1790 8 632 1 chr5B.!!$F1 624
16 TraesCS2A01G178800 chr2B 647332681 647333268 587 True 361.000000 361 78.3330 4 586 1 chr2B.!!$R2 582
17 TraesCS2A01G178800 chr1B 531104308 531104954 646 False 263.000000 263 74.9290 8 700 1 chr1B.!!$F1 692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
962 1104 0.170116 ATATTGGTTGCAACGCACGG 59.830 50.0 22.67 0.0 38.71 4.94 F
1383 1530 0.038599 TCAACATGCACATCCAGCCT 59.961 50.0 0.00 0.0 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2748 2912 0.108804 TCTCATTCACCTCGTTCGGC 60.109 55.0 0.00 0.00 0.0 5.54 R
3295 3461 0.034616 GCCACTATAGCTGCTGGGAG 59.965 60.0 13.43 8.91 0.0 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
125 139 8.026026 ACAATTTTGAAAACAAATGTTTGGGAC 58.974 29.630 11.94 5.81 46.47 4.46
300 325 9.104965 CCATTCATAAAATGTTTGCTGATTCAT 57.895 29.630 0.00 0.00 0.00 2.57
417 453 7.361127 GTCGATTCTAGAAATGTTCTCCGATA 58.639 38.462 9.71 0.00 41.14 2.92
488 545 8.969121 TGCAAACAGTATAAAATGTTCATGAG 57.031 30.769 0.00 0.00 38.66 2.90
583 666 5.528320 TCATGATGTCAAATATGTGCACGAT 59.472 36.000 13.13 9.46 0.00 3.73
591 692 9.416794 TGTCAAATATGTGCACGATTTTTAAAT 57.583 25.926 20.91 6.34 0.00 1.40
601 702 9.511022 GTGCACGATTTTTAAATAAATGTTCAC 57.489 29.630 0.00 0.00 0.00 3.18
603 704 9.726034 GCACGATTTTTAAATAAATGTTCACTG 57.274 29.630 0.00 0.00 0.00 3.66
688 830 6.537301 GCAAAATGTGATCATGACCATTGAAT 59.463 34.615 14.43 5.50 34.19 2.57
748 890 8.582433 AAAAATTCAATTCAACGATTTACCGT 57.418 26.923 0.00 0.00 45.64 4.83
749 891 9.680315 AAAAATTCAATTCAACGATTTACCGTA 57.320 25.926 0.00 0.00 42.54 4.02
750 892 8.663771 AAATTCAATTCAACGATTTACCGTAC 57.336 30.769 0.00 0.00 42.54 3.67
751 893 6.782298 TTCAATTCAACGATTTACCGTACA 57.218 33.333 0.00 0.00 42.54 2.90
752 894 6.782298 TCAATTCAACGATTTACCGTACAA 57.218 33.333 0.00 0.00 42.54 2.41
753 895 7.187244 TCAATTCAACGATTTACCGTACAAA 57.813 32.000 0.00 0.00 42.54 2.83
754 896 7.292292 TCAATTCAACGATTTACCGTACAAAG 58.708 34.615 0.00 0.00 42.54 2.77
755 897 7.171167 TCAATTCAACGATTTACCGTACAAAGA 59.829 33.333 0.00 0.00 42.54 2.52
756 898 7.605410 ATTCAACGATTTACCGTACAAAGAT 57.395 32.000 0.00 0.00 42.54 2.40
757 899 7.424227 TTCAACGATTTACCGTACAAAGATT 57.576 32.000 0.00 0.00 42.54 2.40
758 900 7.052565 TCAACGATTTACCGTACAAAGATTC 57.947 36.000 0.00 0.00 42.54 2.52
759 901 6.645827 TCAACGATTTACCGTACAAAGATTCA 59.354 34.615 0.00 0.00 42.54 2.57
760 902 7.171167 TCAACGATTTACCGTACAAAGATTCAA 59.829 33.333 0.00 0.00 42.54 2.69
761 903 7.424227 ACGATTTACCGTACAAAGATTCAAA 57.576 32.000 0.00 0.00 41.44 2.69
762 904 7.863666 ACGATTTACCGTACAAAGATTCAAAA 58.136 30.769 0.00 0.00 41.44 2.44
763 905 8.013378 ACGATTTACCGTACAAAGATTCAAAAG 58.987 33.333 0.00 0.00 41.44 2.27
764 906 7.007099 CGATTTACCGTACAAAGATTCAAAAGC 59.993 37.037 0.00 0.00 0.00 3.51
765 907 6.621316 TTACCGTACAAAGATTCAAAAGCA 57.379 33.333 0.00 0.00 0.00 3.91
766 908 5.508200 ACCGTACAAAGATTCAAAAGCAA 57.492 34.783 0.00 0.00 0.00 3.91
767 909 5.897050 ACCGTACAAAGATTCAAAAGCAAA 58.103 33.333 0.00 0.00 0.00 3.68
768 910 6.512297 ACCGTACAAAGATTCAAAAGCAAAT 58.488 32.000 0.00 0.00 0.00 2.32
769 911 7.653647 ACCGTACAAAGATTCAAAAGCAAATA 58.346 30.769 0.00 0.00 0.00 1.40
770 912 8.138712 ACCGTACAAAGATTCAAAAGCAAATAA 58.861 29.630 0.00 0.00 0.00 1.40
771 913 9.139174 CCGTACAAAGATTCAAAAGCAAATAAT 57.861 29.630 0.00 0.00 0.00 1.28
776 918 9.956797 CAAAGATTCAAAAGCAAATAATAACGG 57.043 29.630 0.00 0.00 0.00 4.44
777 919 9.705290 AAAGATTCAAAAGCAAATAATAACGGT 57.295 25.926 0.00 0.00 0.00 4.83
795 937 8.974060 ATAACGGTAAGAATTATGTTCCATGT 57.026 30.769 0.00 0.00 34.96 3.21
796 938 7.696992 AACGGTAAGAATTATGTTCCATGTT 57.303 32.000 0.00 0.00 29.69 2.71
797 939 8.795842 AACGGTAAGAATTATGTTCCATGTTA 57.204 30.769 0.00 0.00 29.69 2.41
798 940 8.974060 ACGGTAAGAATTATGTTCCATGTTAT 57.026 30.769 0.00 0.00 30.46 1.89
799 941 9.403583 ACGGTAAGAATTATGTTCCATGTTATT 57.596 29.630 0.00 0.00 30.46 1.40
810 952 8.954950 ATGTTCCATGTTATTTTTGTGTTGAA 57.045 26.923 0.00 0.00 0.00 2.69
811 953 8.954950 TGTTCCATGTTATTTTTGTGTTGAAT 57.045 26.923 0.00 0.00 0.00 2.57
833 975 9.695155 TGAATATATCATATCTTAGTGTCGGGA 57.305 33.333 0.00 0.00 31.50 5.14
840 982 7.667557 TCATATCTTAGTGTCGGGAATTTAGG 58.332 38.462 0.00 0.00 0.00 2.69
841 983 7.507956 TCATATCTTAGTGTCGGGAATTTAGGA 59.492 37.037 0.00 0.00 0.00 2.94
842 984 6.749036 ATCTTAGTGTCGGGAATTTAGGAT 57.251 37.500 0.00 0.00 0.00 3.24
843 985 6.555463 TCTTAGTGTCGGGAATTTAGGATT 57.445 37.500 0.00 0.00 0.00 3.01
844 986 6.954232 TCTTAGTGTCGGGAATTTAGGATTT 58.046 36.000 0.00 0.00 0.00 2.17
845 987 6.821665 TCTTAGTGTCGGGAATTTAGGATTTG 59.178 38.462 0.00 0.00 0.00 2.32
846 988 3.694566 AGTGTCGGGAATTTAGGATTTGC 59.305 43.478 0.00 0.00 0.00 3.68
847 989 3.020984 TGTCGGGAATTTAGGATTTGCC 58.979 45.455 0.00 0.00 0.00 4.52
848 990 3.020984 GTCGGGAATTTAGGATTTGCCA 58.979 45.455 0.00 0.00 40.02 4.92
849 991 3.066760 GTCGGGAATTTAGGATTTGCCAG 59.933 47.826 0.00 0.00 40.02 4.85
850 992 3.053991 TCGGGAATTTAGGATTTGCCAGA 60.054 43.478 0.00 0.00 40.02 3.86
851 993 3.699038 CGGGAATTTAGGATTTGCCAGAA 59.301 43.478 0.00 0.00 40.02 3.02
852 994 4.159506 CGGGAATTTAGGATTTGCCAGAAA 59.840 41.667 0.00 0.00 40.02 2.52
853 995 5.337169 CGGGAATTTAGGATTTGCCAGAAAA 60.337 40.000 0.00 0.00 40.02 2.29
854 996 6.630188 CGGGAATTTAGGATTTGCCAGAAAAT 60.630 38.462 0.00 0.00 40.02 1.82
855 997 6.539826 GGGAATTTAGGATTTGCCAGAAAATG 59.460 38.462 0.00 0.00 40.02 2.32
856 998 7.330262 GGAATTTAGGATTTGCCAGAAAATGA 58.670 34.615 0.00 0.00 40.02 2.57
857 999 7.278646 GGAATTTAGGATTTGCCAGAAAATGAC 59.721 37.037 0.00 0.00 40.02 3.06
858 1000 5.659440 TTAGGATTTGCCAGAAAATGACC 57.341 39.130 0.00 0.00 40.02 4.02
859 1001 3.509442 AGGATTTGCCAGAAAATGACCA 58.491 40.909 0.00 0.00 40.02 4.02
860 1002 3.903090 AGGATTTGCCAGAAAATGACCAA 59.097 39.130 0.00 0.00 40.02 3.67
861 1003 4.533311 AGGATTTGCCAGAAAATGACCAAT 59.467 37.500 0.00 0.00 40.02 3.16
862 1004 5.013391 AGGATTTGCCAGAAAATGACCAATT 59.987 36.000 0.00 0.00 40.02 2.32
863 1005 6.213195 AGGATTTGCCAGAAAATGACCAATTA 59.787 34.615 0.00 0.00 40.02 1.40
864 1006 7.049754 GGATTTGCCAGAAAATGACCAATTAT 58.950 34.615 0.00 0.00 36.34 1.28
865 1007 7.553760 GGATTTGCCAGAAAATGACCAATTATT 59.446 33.333 0.00 0.00 36.34 1.40
866 1008 9.598517 GATTTGCCAGAAAATGACCAATTATTA 57.401 29.630 0.00 0.00 29.89 0.98
867 1009 9.603921 ATTTGCCAGAAAATGACCAATTATTAG 57.396 29.630 0.00 0.00 0.00 1.73
868 1010 7.716799 TGCCAGAAAATGACCAATTATTAGT 57.283 32.000 0.00 0.00 0.00 2.24
869 1011 7.771183 TGCCAGAAAATGACCAATTATTAGTC 58.229 34.615 0.00 0.00 0.00 2.59
870 1012 6.912591 GCCAGAAAATGACCAATTATTAGTCG 59.087 38.462 0.00 0.00 33.09 4.18
871 1013 7.201696 GCCAGAAAATGACCAATTATTAGTCGA 60.202 37.037 0.00 0.00 33.09 4.20
872 1014 8.122952 CCAGAAAATGACCAATTATTAGTCGAC 58.877 37.037 7.70 7.70 33.09 4.20
873 1015 7.846107 CAGAAAATGACCAATTATTAGTCGACG 59.154 37.037 10.46 0.00 33.09 5.12
874 1016 6.598753 AAATGACCAATTATTAGTCGACGG 57.401 37.500 10.46 5.09 33.09 4.79
875 1017 4.987408 TGACCAATTATTAGTCGACGGA 57.013 40.909 10.46 2.89 33.09 4.69
876 1018 5.524971 TGACCAATTATTAGTCGACGGAT 57.475 39.130 10.46 10.63 33.09 4.18
877 1019 6.638096 TGACCAATTATTAGTCGACGGATA 57.362 37.500 10.46 9.62 33.09 2.59
878 1020 7.041635 TGACCAATTATTAGTCGACGGATAA 57.958 36.000 20.97 20.97 33.09 1.75
879 1021 7.490840 TGACCAATTATTAGTCGACGGATAAA 58.509 34.615 21.92 11.40 33.09 1.40
880 1022 7.980662 TGACCAATTATTAGTCGACGGATAAAA 59.019 33.333 21.92 10.57 33.09 1.52
881 1023 8.897872 ACCAATTATTAGTCGACGGATAAAAT 57.102 30.769 21.92 14.86 0.00 1.82
882 1024 8.985805 ACCAATTATTAGTCGACGGATAAAATC 58.014 33.333 21.92 0.00 0.00 2.17
883 1025 8.984764 CCAATTATTAGTCGACGGATAAAATCA 58.015 33.333 21.92 7.48 0.00 2.57
891 1033 8.084590 AGTCGACGGATAAAATCAATTAATCC 57.915 34.615 10.46 6.84 32.89 3.01
892 1034 7.713507 AGTCGACGGATAAAATCAATTAATCCA 59.286 33.333 10.46 0.00 34.52 3.41
893 1035 8.504005 GTCGACGGATAAAATCAATTAATCCAT 58.496 33.333 0.00 3.11 34.52 3.41
894 1036 9.713713 TCGACGGATAAAATCAATTAATCCATA 57.286 29.630 13.39 0.00 34.52 2.74
912 1054 8.985315 AATCCATATCTTTAATCTGCAGTCAA 57.015 30.769 14.67 3.49 0.00 3.18
913 1055 8.985315 ATCCATATCTTTAATCTGCAGTCAAA 57.015 30.769 14.67 11.06 0.00 2.69
914 1056 8.985315 TCCATATCTTTAATCTGCAGTCAAAT 57.015 30.769 14.67 0.00 0.00 2.32
920 1062 8.948853 TCTTTAATCTGCAGTCAAATAAAACG 57.051 30.769 14.67 3.86 0.00 3.60
921 1063 7.537306 TCTTTAATCTGCAGTCAAATAAAACGC 59.463 33.333 14.67 0.00 0.00 4.84
922 1064 5.376854 AATCTGCAGTCAAATAAAACGCT 57.623 34.783 14.67 0.00 0.00 5.07
923 1065 6.494893 AATCTGCAGTCAAATAAAACGCTA 57.505 33.333 14.67 0.00 0.00 4.26
924 1066 5.933187 TCTGCAGTCAAATAAAACGCTAA 57.067 34.783 14.67 0.00 0.00 3.09
925 1067 5.685841 TCTGCAGTCAAATAAAACGCTAAC 58.314 37.500 14.67 0.00 0.00 2.34
927 1069 4.211584 TGCAGTCAAATAAAACGCTAACGA 59.788 37.500 0.00 0.00 43.93 3.85
928 1070 5.106869 TGCAGTCAAATAAAACGCTAACGAT 60.107 36.000 0.00 0.00 43.93 3.73
929 1071 6.091034 TGCAGTCAAATAAAACGCTAACGATA 59.909 34.615 0.00 0.00 43.93 2.92
930 1072 6.957077 GCAGTCAAATAAAACGCTAACGATAA 59.043 34.615 0.00 0.00 43.93 1.75
931 1073 7.162062 GCAGTCAAATAAAACGCTAACGATAAG 59.838 37.037 0.00 0.00 43.93 1.73
932 1074 7.162062 CAGTCAAATAAAACGCTAACGATAAGC 59.838 37.037 0.00 0.00 43.93 3.09
942 1084 4.982999 GCTAACGATAAGCGATATCCTCA 58.017 43.478 0.00 0.00 44.57 3.86
943 1085 5.399858 GCTAACGATAAGCGATATCCTCAA 58.600 41.667 0.00 0.00 44.57 3.02
944 1086 6.037098 GCTAACGATAAGCGATATCCTCAAT 58.963 40.000 0.00 0.00 44.57 2.57
945 1087 7.194278 GCTAACGATAAGCGATATCCTCAATA 58.806 38.462 0.00 0.00 44.57 1.90
946 1088 7.863375 GCTAACGATAAGCGATATCCTCAATAT 59.137 37.037 0.00 0.00 44.57 1.28
947 1089 9.737427 CTAACGATAAGCGATATCCTCAATATT 57.263 33.333 0.00 0.00 44.57 1.28
948 1090 7.993821 ACGATAAGCGATATCCTCAATATTG 57.006 36.000 9.29 9.29 44.57 1.90
949 1091 6.980978 ACGATAAGCGATATCCTCAATATTGG 59.019 38.462 15.36 6.32 44.57 3.16
950 1092 6.980978 CGATAAGCGATATCCTCAATATTGGT 59.019 38.462 15.36 2.83 41.99 3.67
951 1093 7.492669 CGATAAGCGATATCCTCAATATTGGTT 59.507 37.037 15.36 12.08 46.76 3.67
952 1094 6.808008 AAGCGATATCCTCAATATTGGTTG 57.192 37.500 15.36 6.37 44.93 3.77
953 1095 4.697352 AGCGATATCCTCAATATTGGTTGC 59.303 41.667 15.36 9.71 38.69 4.17
954 1096 4.455533 GCGATATCCTCAATATTGGTTGCA 59.544 41.667 15.36 0.00 33.72 4.08
955 1097 5.048782 GCGATATCCTCAATATTGGTTGCAA 60.049 40.000 15.36 0.00 33.72 4.08
956 1098 6.373779 CGATATCCTCAATATTGGTTGCAAC 58.626 40.000 21.59 21.59 30.37 4.17
957 1099 4.637483 ATCCTCAATATTGGTTGCAACG 57.363 40.909 22.67 7.70 0.00 4.10
958 1100 2.163412 TCCTCAATATTGGTTGCAACGC 59.837 45.455 22.67 15.82 0.00 4.84
959 1101 2.094803 CCTCAATATTGGTTGCAACGCA 60.095 45.455 22.67 18.09 36.47 5.24
960 1102 2.916716 CTCAATATTGGTTGCAACGCAC 59.083 45.455 22.67 10.20 38.71 5.34
961 1103 1.648191 CAATATTGGTTGCAACGCACG 59.352 47.619 22.67 4.28 38.71 5.34
962 1104 0.170116 ATATTGGTTGCAACGCACGG 59.830 50.000 22.67 0.00 38.71 4.94
963 1105 1.857318 TATTGGTTGCAACGCACGGG 61.857 55.000 22.67 0.00 38.71 5.28
966 1108 4.264638 GTTGCAACGCACGGGCTT 62.265 61.111 14.90 0.00 38.71 4.35
967 1109 3.522731 TTGCAACGCACGGGCTTT 61.523 55.556 8.62 0.00 38.71 3.51
968 1110 3.069980 TTGCAACGCACGGGCTTTT 62.070 52.632 8.62 0.00 38.71 2.27
969 1111 3.029735 GCAACGCACGGGCTTTTG 61.030 61.111 8.62 12.42 38.10 2.44
970 1112 3.029735 CAACGCACGGGCTTTTGC 61.030 61.111 8.62 0.00 46.64 3.68
971 1113 3.216292 AACGCACGGGCTTTTGCT 61.216 55.556 8.62 0.00 46.54 3.91
972 1114 3.483235 AACGCACGGGCTTTTGCTG 62.483 57.895 8.62 0.00 46.54 4.41
973 1115 4.705519 CGCACGGGCTTTTGCTGG 62.706 66.667 8.62 0.00 46.54 4.85
994 1136 0.616371 CATACCAAACCCTCCCGTCA 59.384 55.000 0.00 0.00 0.00 4.35
1008 1155 2.436646 GTCACCACCATGGCCGAG 60.437 66.667 13.04 0.22 42.67 4.63
1070 1217 4.918201 CCGAATCAGCGCCCTCCC 62.918 72.222 2.29 0.00 0.00 4.30
1084 1231 4.437587 TCCCGGACGACCTCCTCC 62.438 72.222 0.73 0.00 36.80 4.30
1099 1246 1.840650 CTCCGGGCCATCATCTCCT 60.841 63.158 4.39 0.00 0.00 3.69
1100 1247 1.825281 CTCCGGGCCATCATCTCCTC 61.825 65.000 4.39 0.00 0.00 3.71
1101 1248 2.746359 CGGGCCATCATCTCCTCC 59.254 66.667 4.39 0.00 0.00 4.30
1102 1249 2.746359 GGGCCATCATCTCCTCCG 59.254 66.667 4.39 0.00 0.00 4.63
1108 1255 1.535202 ATCATCTCCTCCGGCCTCC 60.535 63.158 0.00 0.00 0.00 4.30
1205 1352 1.674611 GACGATGTCGAACTGCACGG 61.675 60.000 9.67 0.00 43.02 4.94
1306 1453 1.002403 TTCGCCTCCCTGGACCATA 59.998 57.895 0.00 0.00 38.35 2.74
1351 1498 1.885871 GTCACCAAGGGCATTCAGC 59.114 57.895 0.00 0.00 44.65 4.26
1352 1499 0.610232 GTCACCAAGGGCATTCAGCT 60.610 55.000 0.00 0.00 44.79 4.24
1353 1500 0.609957 TCACCAAGGGCATTCAGCTG 60.610 55.000 7.63 7.63 44.79 4.24
1370 1517 0.109086 CTGCTCGTCCTCGTCAACAT 60.109 55.000 0.00 0.00 38.33 2.71
1383 1530 0.038599 TCAACATGCACATCCAGCCT 59.961 50.000 0.00 0.00 0.00 4.58
1388 1535 3.200593 GCACATCCAGCCTCAGCG 61.201 66.667 0.00 0.00 46.67 5.18
1491 1638 2.478890 CGTCTCCCACGTAGCCGAT 61.479 63.158 0.00 0.00 44.07 4.18
1503 1650 2.159226 CGTAGCCGATGTCTTTCTTCCT 60.159 50.000 0.00 0.00 35.63 3.36
1514 1661 3.045634 TCTTTCTTCCTCACCTCCACAA 58.954 45.455 0.00 0.00 0.00 3.33
1525 1672 5.397221 CCTCACCTCCACAATCTCAATATGT 60.397 44.000 0.00 0.00 0.00 2.29
1564 1711 0.325933 TCATGACCTGGAGTGCTTGG 59.674 55.000 0.00 0.00 0.00 3.61
1594 1741 0.400594 CCCCGTTCTGAAGACCCTTT 59.599 55.000 0.00 0.00 0.00 3.11
1604 1751 2.282180 GACCCTTTTGCTCGCCCA 60.282 61.111 0.00 0.00 0.00 5.36
1605 1752 1.901464 GACCCTTTTGCTCGCCCAA 60.901 57.895 0.00 0.00 0.00 4.12
1645 1792 3.907260 CTCCGCAGCCAAAGCCTCA 62.907 63.158 0.00 0.00 41.25 3.86
1886 2036 6.438108 CCTCTCCATCTCTATCTCAACATGAT 59.562 42.308 0.00 0.00 0.00 2.45
2025 2180 1.140452 CCACTGAGATCCATCCACCAG 59.860 57.143 0.00 0.00 0.00 4.00
2039 2194 0.818296 CACCAGGGTCTTCTCTACGG 59.182 60.000 0.00 0.00 0.00 4.02
2162 2317 6.685527 TGTGTATCTGTCAGTCTGTCTATC 57.314 41.667 0.00 0.00 0.00 2.08
2173 2328 5.954752 TCAGTCTGTCTATCCATCAAGAACT 59.045 40.000 0.00 0.00 0.00 3.01
2182 2337 9.039870 GTCTATCCATCAAGAACTGTTAATGAG 57.960 37.037 11.73 6.03 0.00 2.90
2251 2406 1.977854 TGTATCTGTCTTGGTGCACCT 59.022 47.619 34.75 15.82 36.82 4.00
2254 2409 0.106708 TCTGTCTTGGTGCACCTCAC 59.893 55.000 34.75 26.20 44.90 3.51
2422 2583 4.760204 TCGAGGTTTCTCCCAATTCTTTTC 59.240 41.667 0.00 0.00 36.70 2.29
2442 2603 4.944962 TCAGTTAGTTGATCATTTGGCG 57.055 40.909 0.00 0.00 0.00 5.69
2737 2901 1.953686 TGCTTGTGCCACCTAAAGAAC 59.046 47.619 0.00 0.00 38.71 3.01
2741 2905 4.679372 GCTTGTGCCACCTAAAGAACAAAA 60.679 41.667 0.00 0.00 0.00 2.44
2745 2909 4.988540 GTGCCACCTAAAGAACAAAATTCC 59.011 41.667 0.00 0.00 0.00 3.01
2748 2912 5.696270 GCCACCTAAAGAACAAAATTCCTTG 59.304 40.000 0.00 0.00 0.00 3.61
2868 3032 7.903995 TGGTTTTATTTTGCAGAAATCATCC 57.096 32.000 9.24 4.35 0.00 3.51
2920 3084 4.675510 CTCGATGCATGGCTAATTTGTTT 58.324 39.130 2.46 0.00 0.00 2.83
2921 3085 4.422840 TCGATGCATGGCTAATTTGTTTG 58.577 39.130 2.46 0.00 0.00 2.93
2928 3092 6.757478 TGCATGGCTAATTTGTTTGATGTATG 59.243 34.615 0.00 0.00 0.00 2.39
2929 3093 6.757947 GCATGGCTAATTTGTTTGATGTATGT 59.242 34.615 0.00 0.00 0.00 2.29
2959 3123 2.372264 TGCAAGATCAATCCAAGCCTC 58.628 47.619 0.00 0.00 0.00 4.70
2979 3143 1.741706 CTTGGCGAATCATTGACTGCT 59.258 47.619 6.57 0.00 0.00 4.24
3007 3173 7.858052 GTGAGATCACAATGTTAAAGTTTGG 57.142 36.000 8.09 0.00 45.75 3.28
3024 3190 3.482156 TTGGAGGCATGCTATCTCTTC 57.518 47.619 18.92 4.89 0.00 2.87
3026 3192 1.337635 GGAGGCATGCTATCTCTTCGG 60.338 57.143 18.92 0.00 0.00 4.30
3038 3204 3.672767 TCTCTTCGGTTAAACCAGGTC 57.327 47.619 0.00 0.00 38.47 3.85
3145 3311 8.797266 TCTAACGTAATGCATTACTAGTGATG 57.203 34.615 34.91 24.12 40.27 3.07
3176 3342 7.907389 ACTACTATGTGGTTCTGAAATCTGAA 58.093 34.615 0.00 0.00 0.00 3.02
3180 3346 9.334947 ACTATGTGGTTCTGAAATCTGAATATG 57.665 33.333 6.10 0.00 36.46 1.78
3184 3350 8.274322 TGTGGTTCTGAAATCTGAATATGGTAT 58.726 33.333 6.10 0.00 36.46 2.73
3187 3353 7.229306 GGTTCTGAAATCTGAATATGGTATGCA 59.771 37.037 6.10 0.00 36.46 3.96
3194 3360 8.640063 AATCTGAATATGGTATGCATGCTTTA 57.360 30.769 20.33 8.02 0.00 1.85
3218 3384 3.631227 AGCCATTTTTCTCTGCTATGCTC 59.369 43.478 0.00 0.00 0.00 4.26
3221 3387 4.036498 CCATTTTTCTCTGCTATGCTCTGG 59.964 45.833 0.00 0.00 0.00 3.86
3222 3388 3.988976 TTTTCTCTGCTATGCTCTGGT 57.011 42.857 0.00 0.00 0.00 4.00
3223 3389 3.988976 TTTCTCTGCTATGCTCTGGTT 57.011 42.857 0.00 0.00 0.00 3.67
3224 3390 3.988976 TTCTCTGCTATGCTCTGGTTT 57.011 42.857 0.00 0.00 0.00 3.27
3225 3391 3.988976 TCTCTGCTATGCTCTGGTTTT 57.011 42.857 0.00 0.00 0.00 2.43
3226 3392 3.603532 TCTCTGCTATGCTCTGGTTTTG 58.396 45.455 0.00 0.00 0.00 2.44
3227 3393 3.008375 TCTCTGCTATGCTCTGGTTTTGT 59.992 43.478 0.00 0.00 0.00 2.83
3228 3394 4.222810 TCTCTGCTATGCTCTGGTTTTGTA 59.777 41.667 0.00 0.00 0.00 2.41
3229 3395 4.507710 TCTGCTATGCTCTGGTTTTGTAG 58.492 43.478 0.00 0.00 0.00 2.74
3230 3396 3.009723 TGCTATGCTCTGGTTTTGTAGC 58.990 45.455 0.00 0.00 35.02 3.58
3231 3397 2.030946 GCTATGCTCTGGTTTTGTAGCG 59.969 50.000 0.00 0.00 37.80 4.26
3232 3398 2.185004 ATGCTCTGGTTTTGTAGCGT 57.815 45.000 0.00 0.00 37.80 5.07
3233 3399 1.225855 TGCTCTGGTTTTGTAGCGTG 58.774 50.000 0.00 0.00 37.80 5.34
3234 3400 0.110192 GCTCTGGTTTTGTAGCGTGC 60.110 55.000 0.00 0.00 0.00 5.34
3246 3412 1.877576 TAGCGTGCCACCTCTGTCAG 61.878 60.000 0.00 0.00 0.00 3.51
3247 3413 2.737180 CGTGCCACCTCTGTCAGT 59.263 61.111 0.00 0.00 0.00 3.41
3248 3414 1.069765 CGTGCCACCTCTGTCAGTT 59.930 57.895 0.00 0.00 0.00 3.16
3249 3415 0.532862 CGTGCCACCTCTGTCAGTTT 60.533 55.000 0.00 0.00 0.00 2.66
3250 3416 1.680338 GTGCCACCTCTGTCAGTTTT 58.320 50.000 0.00 0.00 0.00 2.43
3251 3417 2.024414 GTGCCACCTCTGTCAGTTTTT 58.976 47.619 0.00 0.00 0.00 1.94
3252 3418 2.023673 TGCCACCTCTGTCAGTTTTTG 58.976 47.619 0.00 0.00 0.00 2.44
3253 3419 2.024414 GCCACCTCTGTCAGTTTTTGT 58.976 47.619 0.00 0.00 0.00 2.83
3254 3420 2.033424 GCCACCTCTGTCAGTTTTTGTC 59.967 50.000 0.00 0.00 0.00 3.18
3255 3421 3.278574 CCACCTCTGTCAGTTTTTGTCA 58.721 45.455 0.00 0.00 0.00 3.58
3256 3422 3.694072 CCACCTCTGTCAGTTTTTGTCAA 59.306 43.478 0.00 0.00 0.00 3.18
3257 3423 4.157656 CCACCTCTGTCAGTTTTTGTCAAA 59.842 41.667 0.00 0.00 0.00 2.69
3258 3424 5.335127 CACCTCTGTCAGTTTTTGTCAAAG 58.665 41.667 0.00 0.00 0.00 2.77
3259 3425 5.123820 CACCTCTGTCAGTTTTTGTCAAAGA 59.876 40.000 0.00 0.00 0.00 2.52
3260 3426 5.888161 ACCTCTGTCAGTTTTTGTCAAAGAT 59.112 36.000 0.00 0.00 0.00 2.40
3261 3427 6.378280 ACCTCTGTCAGTTTTTGTCAAAGATT 59.622 34.615 0.00 0.00 0.00 2.40
3262 3428 7.556275 ACCTCTGTCAGTTTTTGTCAAAGATTA 59.444 33.333 0.00 0.00 0.00 1.75
3263 3429 8.405531 CCTCTGTCAGTTTTTGTCAAAGATTAA 58.594 33.333 0.00 0.00 0.00 1.40
3264 3430 9.787532 CTCTGTCAGTTTTTGTCAAAGATTAAA 57.212 29.630 0.00 0.00 0.00 1.52
3269 3435 8.751335 TCAGTTTTTGTCAAAGATTAAAATCGC 58.249 29.630 0.00 0.00 40.35 4.58
3270 3436 7.731302 CAGTTTTTGTCAAAGATTAAAATCGCG 59.269 33.333 0.00 0.00 40.35 5.87
3271 3437 6.683090 TTTTGTCAAAGATTAAAATCGCGG 57.317 33.333 6.13 0.00 40.35 6.46
3272 3438 4.349663 TGTCAAAGATTAAAATCGCGGG 57.650 40.909 6.13 0.00 40.35 6.13
3273 3439 4.004314 TGTCAAAGATTAAAATCGCGGGA 58.996 39.130 6.13 4.03 40.35 5.14
3274 3440 4.094294 TGTCAAAGATTAAAATCGCGGGAG 59.906 41.667 6.13 0.00 40.35 4.30
3275 3441 4.331717 GTCAAAGATTAAAATCGCGGGAGA 59.668 41.667 6.13 0.00 40.35 3.71
3276 3442 4.938832 TCAAAGATTAAAATCGCGGGAGAA 59.061 37.500 6.13 0.05 40.35 2.87
3277 3443 5.413213 TCAAAGATTAAAATCGCGGGAGAAA 59.587 36.000 6.13 0.00 40.35 2.52
3278 3444 5.890424 AAGATTAAAATCGCGGGAGAAAA 57.110 34.783 6.13 0.30 40.35 2.29
3279 3445 5.485662 AGATTAAAATCGCGGGAGAAAAG 57.514 39.130 6.13 0.00 40.35 2.27
3280 3446 5.183228 AGATTAAAATCGCGGGAGAAAAGA 58.817 37.500 6.13 0.00 40.35 2.52
3281 3447 5.823045 AGATTAAAATCGCGGGAGAAAAGAT 59.177 36.000 6.13 0.00 40.35 2.40
3282 3448 5.890424 TTAAAATCGCGGGAGAAAAGATT 57.110 34.783 6.13 0.00 33.50 2.40
3283 3449 4.783764 AAAATCGCGGGAGAAAAGATTT 57.216 36.364 6.13 0.00 41.53 2.17
3284 3450 4.357018 AAATCGCGGGAGAAAAGATTTC 57.643 40.909 6.13 0.00 37.03 2.17
3285 3451 1.355971 TCGCGGGAGAAAAGATTTCG 58.644 50.000 6.13 0.00 0.00 3.46
3286 3452 0.247695 CGCGGGAGAAAAGATTTCGC 60.248 55.000 0.00 0.00 38.56 4.70
3287 3453 0.247695 GCGGGAGAAAAGATTTCGCG 60.248 55.000 0.00 0.00 46.09 5.87
3288 3454 0.373716 CGGGAGAAAAGATTTCGCGG 59.626 55.000 6.13 0.00 41.66 6.46
3289 3455 1.450025 GGGAGAAAAGATTTCGCGGT 58.550 50.000 6.13 0.00 0.00 5.68
3290 3456 1.130561 GGGAGAAAAGATTTCGCGGTG 59.869 52.381 6.13 0.00 0.00 4.94
3291 3457 1.130561 GGAGAAAAGATTTCGCGGTGG 59.869 52.381 6.13 0.00 0.00 4.61
3292 3458 0.521735 AGAAAAGATTTCGCGGTGGC 59.478 50.000 6.13 0.00 0.00 5.01
3293 3459 0.456142 GAAAAGATTTCGCGGTGGCC 60.456 55.000 6.13 0.00 35.02 5.36
3294 3460 0.893727 AAAAGATTTCGCGGTGGCCT 60.894 50.000 6.13 0.00 35.02 5.19
3295 3461 1.305930 AAAGATTTCGCGGTGGCCTC 61.306 55.000 6.13 0.00 35.02 4.70
3296 3462 2.125106 GATTTCGCGGTGGCCTCT 60.125 61.111 6.13 0.00 35.02 3.69
3297 3463 2.125106 ATTTCGCGGTGGCCTCTC 60.125 61.111 6.13 0.00 35.02 3.20
3298 3464 3.682292 ATTTCGCGGTGGCCTCTCC 62.682 63.158 6.13 2.99 35.02 3.71
3305 3471 4.792804 GTGGCCTCTCCCAGCAGC 62.793 72.222 3.32 0.00 35.05 5.25
3307 3473 2.765807 GGCCTCTCCCAGCAGCTA 60.766 66.667 0.00 0.00 0.00 3.32
3308 3474 2.146061 GGCCTCTCCCAGCAGCTAT 61.146 63.158 0.00 0.00 0.00 2.97
3309 3475 0.833834 GGCCTCTCCCAGCAGCTATA 60.834 60.000 0.00 0.00 0.00 1.31
3310 3476 0.607620 GCCTCTCCCAGCAGCTATAG 59.392 60.000 0.00 0.00 0.00 1.31
3311 3477 2.008242 CCTCTCCCAGCAGCTATAGT 57.992 55.000 0.00 0.00 0.00 2.12
3312 3478 1.617850 CCTCTCCCAGCAGCTATAGTG 59.382 57.143 0.00 0.18 0.00 2.74
3313 3479 1.617850 CTCTCCCAGCAGCTATAGTGG 59.382 57.143 0.00 0.92 0.00 4.00
3314 3480 0.034616 CTCCCAGCAGCTATAGTGGC 59.965 60.000 0.00 5.69 0.00 5.01
3315 3481 1.072159 CCCAGCAGCTATAGTGGCC 59.928 63.158 12.33 0.00 0.00 5.36
3316 3482 1.301244 CCAGCAGCTATAGTGGCCG 60.301 63.158 12.33 4.65 0.00 6.13
3317 3483 1.958205 CAGCAGCTATAGTGGCCGC 60.958 63.158 8.71 8.71 33.78 6.53
3318 3484 2.666526 GCAGCTATAGTGGCCGCC 60.667 66.667 14.07 1.04 0.00 6.13
3319 3485 2.821685 CAGCTATAGTGGCCGCCA 59.178 61.111 14.07 8.43 0.00 5.69
3320 3486 1.372683 CAGCTATAGTGGCCGCCAT 59.627 57.895 16.96 7.73 35.28 4.40
3321 3487 0.608130 CAGCTATAGTGGCCGCCATA 59.392 55.000 16.96 8.63 35.28 2.74
3322 3488 0.898320 AGCTATAGTGGCCGCCATAG 59.102 55.000 22.89 22.89 35.28 2.23
3323 3489 0.741221 GCTATAGTGGCCGCCATAGC 60.741 60.000 31.69 31.69 34.10 2.97
3340 3506 4.191950 CGGGCAATCGCGGCAAAT 62.192 61.111 6.13 0.00 43.76 2.32
3341 3507 2.829206 CGGGCAATCGCGGCAAATA 61.829 57.895 6.13 0.00 43.76 1.40
3342 3508 1.008538 GGGCAATCGCGGCAAATAG 60.009 57.895 6.13 0.00 39.92 1.73
3343 3509 1.658409 GGCAATCGCGGCAAATAGC 60.658 57.895 6.13 0.96 39.92 2.97
3369 3535 4.886755 AAAATTCTGATGGGGGAGATGA 57.113 40.909 0.00 0.00 0.00 2.92
3370 3536 5.414133 AAAATTCTGATGGGGGAGATGAT 57.586 39.130 0.00 0.00 0.00 2.45
3371 3537 5.414133 AAATTCTGATGGGGGAGATGATT 57.586 39.130 0.00 0.00 0.00 2.57
3372 3538 5.414133 AATTCTGATGGGGGAGATGATTT 57.586 39.130 0.00 0.00 0.00 2.17
3373 3539 4.443978 TTCTGATGGGGGAGATGATTTC 57.556 45.455 0.00 0.00 0.00 2.17
3374 3540 2.713167 TCTGATGGGGGAGATGATTTCC 59.287 50.000 0.00 0.00 0.00 3.13
3375 3541 1.421268 TGATGGGGGAGATGATTTCCG 59.579 52.381 0.00 0.00 35.48 4.30
3376 3542 0.773644 ATGGGGGAGATGATTTCCGG 59.226 55.000 0.00 0.00 35.48 5.14
3377 3543 0.327095 TGGGGGAGATGATTTCCGGA 60.327 55.000 0.00 0.00 35.48 5.14
3378 3544 0.398318 GGGGGAGATGATTTCCGGAG 59.602 60.000 3.34 0.00 35.48 4.63
3393 3559 1.247567 CGGAGGGTTTTGCTCATTGT 58.752 50.000 0.00 0.00 0.00 2.71
3394 3560 1.613437 CGGAGGGTTTTGCTCATTGTT 59.387 47.619 0.00 0.00 0.00 2.83
3395 3561 2.607771 CGGAGGGTTTTGCTCATTGTTG 60.608 50.000 0.00 0.00 0.00 3.33
3396 3562 2.627699 GGAGGGTTTTGCTCATTGTTGA 59.372 45.455 0.00 0.00 0.00 3.18
3409 3575 6.323203 CTCATTGTTGAGCCATTTATAGGG 57.677 41.667 0.00 0.00 42.79 3.53
3410 3576 6.012337 TCATTGTTGAGCCATTTATAGGGA 57.988 37.500 0.00 0.00 0.00 4.20
3411 3577 6.064060 TCATTGTTGAGCCATTTATAGGGAG 58.936 40.000 0.00 0.00 0.00 4.30
3412 3578 5.450818 TTGTTGAGCCATTTATAGGGAGT 57.549 39.130 0.00 0.00 0.00 3.85
3413 3579 5.450818 TGTTGAGCCATTTATAGGGAGTT 57.549 39.130 0.00 0.00 0.00 3.01
3414 3580 5.192927 TGTTGAGCCATTTATAGGGAGTTG 58.807 41.667 0.00 0.00 0.00 3.16
3415 3581 5.193679 GTTGAGCCATTTATAGGGAGTTGT 58.806 41.667 0.00 0.00 0.00 3.32
3416 3582 4.780815 TGAGCCATTTATAGGGAGTTGTG 58.219 43.478 0.00 0.00 0.00 3.33
3417 3583 4.137543 GAGCCATTTATAGGGAGTTGTGG 58.862 47.826 0.00 0.00 0.00 4.17
3418 3584 3.785887 AGCCATTTATAGGGAGTTGTGGA 59.214 43.478 0.00 0.00 0.00 4.02
3419 3585 4.137543 GCCATTTATAGGGAGTTGTGGAG 58.862 47.826 0.00 0.00 0.00 3.86
3420 3586 4.718961 CCATTTATAGGGAGTTGTGGAGG 58.281 47.826 0.00 0.00 0.00 4.30
3421 3587 4.412199 CCATTTATAGGGAGTTGTGGAGGA 59.588 45.833 0.00 0.00 0.00 3.71
3422 3588 5.073691 CCATTTATAGGGAGTTGTGGAGGAT 59.926 44.000 0.00 0.00 0.00 3.24
3423 3589 6.410853 CCATTTATAGGGAGTTGTGGAGGATT 60.411 42.308 0.00 0.00 0.00 3.01
3424 3590 6.652205 TTTATAGGGAGTTGTGGAGGATTT 57.348 37.500 0.00 0.00 0.00 2.17
3425 3591 4.779993 ATAGGGAGTTGTGGAGGATTTC 57.220 45.455 0.00 0.00 0.00 2.17
3426 3592 1.279271 AGGGAGTTGTGGAGGATTTCG 59.721 52.381 0.00 0.00 0.00 3.46
3427 3593 1.087501 GGAGTTGTGGAGGATTTCGC 58.912 55.000 0.00 0.00 0.00 4.70
3428 3594 0.721718 GAGTTGTGGAGGATTTCGCG 59.278 55.000 0.00 0.00 0.00 5.87
3429 3595 0.673644 AGTTGTGGAGGATTTCGCGG 60.674 55.000 6.13 0.00 0.00 6.46
3430 3596 2.038269 TTGTGGAGGATTTCGCGGC 61.038 57.895 6.13 0.00 0.00 6.53
3431 3597 2.435938 GTGGAGGATTTCGCGGCA 60.436 61.111 6.13 0.00 0.00 5.69
3432 3598 2.435938 TGGAGGATTTCGCGGCAC 60.436 61.111 6.13 0.00 0.00 5.01
3433 3599 3.202706 GGAGGATTTCGCGGCACC 61.203 66.667 6.13 5.32 0.00 5.01
3434 3600 2.435938 GAGGATTTCGCGGCACCA 60.436 61.111 6.13 0.00 0.00 4.17
3435 3601 2.436646 AGGATTTCGCGGCACCAG 60.437 61.111 6.13 0.00 0.00 4.00
3436 3602 4.179579 GGATTTCGCGGCACCAGC 62.180 66.667 6.13 0.00 41.10 4.85
3447 3613 1.066918 GCACCAGCCATAGCATTGC 59.933 57.895 0.00 0.00 43.56 3.56
3448 3614 1.357690 CACCAGCCATAGCATTGCG 59.642 57.895 2.38 0.00 43.56 4.85
3449 3615 1.825191 ACCAGCCATAGCATTGCGG 60.825 57.895 2.38 0.00 43.56 5.69
3450 3616 2.333938 CAGCCATAGCATTGCGGC 59.666 61.111 15.71 15.71 45.23 6.53
3452 3618 3.279116 GCCATAGCATTGCGGCGA 61.279 61.111 12.98 0.00 39.53 5.54
3453 3619 2.941333 CCATAGCATTGCGGCGAG 59.059 61.111 12.98 0.00 39.27 5.03
3454 3620 2.610694 CCATAGCATTGCGGCGAGG 61.611 63.158 12.98 0.00 39.27 4.63
3455 3621 2.974698 ATAGCATTGCGGCGAGGC 60.975 61.111 18.59 18.59 39.27 4.70
3456 3622 3.466791 ATAGCATTGCGGCGAGGCT 62.467 57.895 29.50 29.50 38.49 4.58
3459 3625 4.845580 CATTGCGGCGAGGCTCCT 62.846 66.667 12.98 0.00 0.00 3.69
3460 3626 3.154473 ATTGCGGCGAGGCTCCTA 61.154 61.111 12.98 0.00 0.00 2.94
3461 3627 3.157217 ATTGCGGCGAGGCTCCTAG 62.157 63.158 12.98 1.06 0.00 3.02
3465 3631 3.922640 GGCGAGGCTCCTAGGCAG 61.923 72.222 15.67 3.85 44.19 4.85
3466 3632 4.600576 GCGAGGCTCCTAGGCAGC 62.601 72.222 19.33 19.33 44.19 5.25
3467 3633 2.837291 CGAGGCTCCTAGGCAGCT 60.837 66.667 23.78 14.57 44.19 4.24
3468 3634 1.529478 CGAGGCTCCTAGGCAGCTA 60.529 63.158 23.78 0.82 44.19 3.32
3469 3635 0.897863 CGAGGCTCCTAGGCAGCTAT 60.898 60.000 23.78 16.53 44.19 2.97
3470 3636 1.614583 CGAGGCTCCTAGGCAGCTATA 60.615 57.143 23.78 0.00 44.19 1.31
3471 3637 2.099405 GAGGCTCCTAGGCAGCTATAG 58.901 57.143 23.78 9.37 44.19 1.31
3472 3638 0.534873 GGCTCCTAGGCAGCTATAGC 59.465 60.000 23.78 17.33 40.97 2.97
3492 3658 2.458592 GCAGCTATCGCGACAATTTT 57.541 45.000 12.93 0.00 42.32 1.82
3493 3659 2.104144 GCAGCTATCGCGACAATTTTG 58.896 47.619 12.93 6.88 42.32 2.44
3494 3660 2.104144 CAGCTATCGCGACAATTTTGC 58.896 47.619 12.93 8.09 42.32 3.68
3499 3665 2.258286 GCGACAATTTTGCGGGCT 59.742 55.556 0.00 0.00 0.00 5.19
3500 3666 1.504446 GCGACAATTTTGCGGGCTA 59.496 52.632 0.00 0.00 0.00 3.93
3501 3667 0.100503 GCGACAATTTTGCGGGCTAT 59.899 50.000 0.00 0.00 0.00 2.97
3502 3668 1.469079 GCGACAATTTTGCGGGCTATT 60.469 47.619 0.00 0.00 0.00 1.73
3503 3669 2.874849 CGACAATTTTGCGGGCTATTT 58.125 42.857 0.00 0.00 0.00 1.40
3504 3670 3.249917 CGACAATTTTGCGGGCTATTTT 58.750 40.909 0.00 0.00 0.00 1.82
3505 3671 4.416620 CGACAATTTTGCGGGCTATTTTA 58.583 39.130 0.00 0.00 0.00 1.52
3506 3672 4.859798 CGACAATTTTGCGGGCTATTTTAA 59.140 37.500 0.00 0.00 0.00 1.52
3507 3673 5.518487 CGACAATTTTGCGGGCTATTTTAAT 59.482 36.000 0.00 0.00 0.00 1.40
3508 3674 6.291585 CGACAATTTTGCGGGCTATTTTAATC 60.292 38.462 0.00 0.00 0.00 1.75
3509 3675 6.639563 ACAATTTTGCGGGCTATTTTAATCT 58.360 32.000 0.00 0.00 0.00 2.40
3510 3676 7.777095 ACAATTTTGCGGGCTATTTTAATCTA 58.223 30.769 0.00 0.00 0.00 1.98
3511 3677 8.421002 ACAATTTTGCGGGCTATTTTAATCTAT 58.579 29.630 0.00 0.00 0.00 1.98
3512 3678 8.702438 CAATTTTGCGGGCTATTTTAATCTATG 58.298 33.333 0.00 0.00 0.00 2.23
3550 3716 7.700022 TCATCAGATGATCAGACTATACCAG 57.300 40.000 9.21 0.00 33.59 4.00
3564 3730 4.781087 ACTATACCAGGCTAGGTTGACAAA 59.219 41.667 12.73 0.00 43.08 2.83
3571 3737 3.506067 AGGCTAGGTTGACAAATTTTCCG 59.494 43.478 0.00 0.00 0.00 4.30
3580 3746 4.075682 TGACAAATTTTCCGGTGCTATGA 58.924 39.130 0.00 0.00 0.00 2.15
3583 3749 5.469479 ACAAATTTTCCGGTGCTATGAAAG 58.531 37.500 0.00 0.00 30.41 2.62
3589 3755 4.280436 TCCGGTGCTATGAAAGAGAAAA 57.720 40.909 0.00 0.00 0.00 2.29
3590 3756 4.000988 TCCGGTGCTATGAAAGAGAAAAC 58.999 43.478 0.00 0.00 0.00 2.43
3640 3813 8.741901 GGAAGACTCCTAGCATGTTGCTGTTA 62.742 46.154 12.09 0.00 44.95 2.41
3660 3833 3.530265 ACATGCACAAAGGCCATATTG 57.470 42.857 5.01 10.04 0.00 1.90
3670 3843 0.883833 GGCCATATTGCTGAATCGGG 59.116 55.000 0.00 0.00 0.00 5.14
3681 3854 2.880167 GCTGAATCGGGGAAGGTCTTTT 60.880 50.000 0.00 0.00 0.00 2.27
3687 3861 1.336755 CGGGGAAGGTCTTTTTGTGTG 59.663 52.381 0.00 0.00 0.00 3.82
3694 3868 2.765699 AGGTCTTTTTGTGTGTGGCAAT 59.234 40.909 0.00 0.00 0.00 3.56
3739 3913 3.092301 CCCCCAGAAGAAGATTTCAACC 58.908 50.000 0.00 0.00 0.00 3.77
3740 3914 3.500289 CCCCCAGAAGAAGATTTCAACCA 60.500 47.826 0.00 0.00 0.00 3.67
3742 3916 4.144297 CCCAGAAGAAGATTTCAACCACA 58.856 43.478 0.00 0.00 0.00 4.17
3755 3929 1.691976 CAACCACACAGGACCTGACTA 59.308 52.381 28.56 0.00 41.22 2.59
3783 3957 3.009033 TGCACCTGCTAAGTAAATCTGGT 59.991 43.478 0.00 0.00 42.66 4.00
3788 3962 5.112686 CCTGCTAAGTAAATCTGGTCTGAC 58.887 45.833 0.00 0.00 0.00 3.51
3798 3972 2.100197 TCTGGTCTGACCTTGTATCCG 58.900 52.381 26.03 6.13 39.58 4.18
3845 4019 5.799936 CGCCTTGGAAATAACACAGTTAATG 59.200 40.000 0.00 0.00 0.00 1.90
3889 4063 3.272766 GCACTTCCTGCAAAACCAC 57.727 52.632 0.00 0.00 46.29 4.16
3895 4069 0.467290 TCCTGCAAAACCACCTCCAC 60.467 55.000 0.00 0.00 0.00 4.02
3896 4070 0.468029 CCTGCAAAACCACCTCCACT 60.468 55.000 0.00 0.00 0.00 4.00
3897 4071 1.402787 CTGCAAAACCACCTCCACTT 58.597 50.000 0.00 0.00 0.00 3.16
3898 4072 1.338020 CTGCAAAACCACCTCCACTTC 59.662 52.381 0.00 0.00 0.00 3.01
3899 4073 1.064017 TGCAAAACCACCTCCACTTCT 60.064 47.619 0.00 0.00 0.00 2.85
3900 4074 1.609072 GCAAAACCACCTCCACTTCTC 59.391 52.381 0.00 0.00 0.00 2.87
3901 4075 2.230660 CAAAACCACCTCCACTTCTCC 58.769 52.381 0.00 0.00 0.00 3.71
3902 4076 1.518367 AAACCACCTCCACTTCTCCA 58.482 50.000 0.00 0.00 0.00 3.86
3903 4077 1.059913 AACCACCTCCACTTCTCCAG 58.940 55.000 0.00 0.00 0.00 3.86
3904 4078 0.104934 ACCACCTCCACTTCTCCAGT 60.105 55.000 0.00 0.00 35.35 4.00
3905 4079 0.610687 CCACCTCCACTTCTCCAGTC 59.389 60.000 0.00 0.00 30.92 3.51
3906 4080 1.638529 CACCTCCACTTCTCCAGTCT 58.361 55.000 0.00 0.00 30.92 3.24
3907 4081 1.548269 CACCTCCACTTCTCCAGTCTC 59.452 57.143 0.00 0.00 30.92 3.36
3908 4082 1.148027 ACCTCCACTTCTCCAGTCTCA 59.852 52.381 0.00 0.00 30.92 3.27
3909 4083 1.548269 CCTCCACTTCTCCAGTCTCAC 59.452 57.143 0.00 0.00 30.92 3.51
3910 4084 1.201181 CTCCACTTCTCCAGTCTCACG 59.799 57.143 0.00 0.00 30.92 4.35
3911 4085 0.389166 CCACTTCTCCAGTCTCACGC 60.389 60.000 0.00 0.00 30.92 5.34
3912 4086 0.600557 CACTTCTCCAGTCTCACGCT 59.399 55.000 0.00 0.00 30.92 5.07
3913 4087 0.600557 ACTTCTCCAGTCTCACGCTG 59.399 55.000 0.00 0.00 0.00 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
273 298 7.549842 TGAATCAGCAAACATTTTATGAATGGG 59.450 33.333 8.07 0.78 32.14 4.00
345 375 6.760770 GGAACCAGTTTTGAATTTCATGAACA 59.239 34.615 7.89 0.00 30.20 3.18
390 425 4.740695 GGAGAACATTTCTAGAATCGACGG 59.259 45.833 5.89 0.00 40.87 4.79
723 865 8.582433 ACGGTAAATCGTTGAATTGAATTTTT 57.418 26.923 0.00 0.00 40.85 1.94
724 866 9.120422 GTACGGTAAATCGTTGAATTGAATTTT 57.880 29.630 0.00 0.00 43.59 1.82
725 867 8.291032 TGTACGGTAAATCGTTGAATTGAATTT 58.709 29.630 0.00 0.00 43.59 1.82
726 868 7.808672 TGTACGGTAAATCGTTGAATTGAATT 58.191 30.769 0.00 0.00 43.59 2.17
727 869 7.367159 TGTACGGTAAATCGTTGAATTGAAT 57.633 32.000 0.00 0.00 43.59 2.57
728 870 6.782298 TGTACGGTAAATCGTTGAATTGAA 57.218 33.333 0.00 0.00 43.59 2.69
729 871 6.782298 TTGTACGGTAAATCGTTGAATTGA 57.218 33.333 0.00 0.00 43.59 2.57
730 872 7.292292 TCTTTGTACGGTAAATCGTTGAATTG 58.708 34.615 0.00 0.00 43.59 2.32
731 873 7.424227 TCTTTGTACGGTAAATCGTTGAATT 57.576 32.000 0.00 0.00 43.59 2.17
732 874 7.605410 ATCTTTGTACGGTAAATCGTTGAAT 57.395 32.000 0.00 0.00 43.59 2.57
733 875 7.171167 TGAATCTTTGTACGGTAAATCGTTGAA 59.829 33.333 0.00 0.00 43.59 2.69
734 876 6.645827 TGAATCTTTGTACGGTAAATCGTTGA 59.354 34.615 0.00 0.00 43.59 3.18
735 877 6.823531 TGAATCTTTGTACGGTAAATCGTTG 58.176 36.000 0.00 0.00 43.59 4.10
736 878 7.424227 TTGAATCTTTGTACGGTAAATCGTT 57.576 32.000 0.00 0.00 43.59 3.85
737 879 7.424227 TTTGAATCTTTGTACGGTAAATCGT 57.576 32.000 0.00 0.00 45.88 3.73
738 880 7.007099 GCTTTTGAATCTTTGTACGGTAAATCG 59.993 37.037 0.00 0.00 0.00 3.34
739 881 7.806014 TGCTTTTGAATCTTTGTACGGTAAATC 59.194 33.333 0.00 0.00 0.00 2.17
740 882 7.653647 TGCTTTTGAATCTTTGTACGGTAAAT 58.346 30.769 0.00 0.00 0.00 1.40
741 883 7.028926 TGCTTTTGAATCTTTGTACGGTAAA 57.971 32.000 0.00 0.00 0.00 2.01
742 884 6.621316 TGCTTTTGAATCTTTGTACGGTAA 57.379 33.333 0.00 0.00 0.00 2.85
743 885 6.621316 TTGCTTTTGAATCTTTGTACGGTA 57.379 33.333 0.00 0.00 0.00 4.02
744 886 5.508200 TTGCTTTTGAATCTTTGTACGGT 57.492 34.783 0.00 0.00 0.00 4.83
745 887 8.514136 TTATTTGCTTTTGAATCTTTGTACGG 57.486 30.769 0.00 0.00 0.00 4.02
750 892 9.956797 CCGTTATTATTTGCTTTTGAATCTTTG 57.043 29.630 0.00 0.00 0.00 2.77
751 893 9.705290 ACCGTTATTATTTGCTTTTGAATCTTT 57.295 25.926 0.00 0.00 0.00 2.52
807 949 9.695155 TCCCGACACTAAGATATGATATATTCA 57.305 33.333 0.00 0.00 39.12 2.57
814 956 8.314751 CCTAAATTCCCGACACTAAGATATGAT 58.685 37.037 0.00 0.00 0.00 2.45
815 957 7.507956 TCCTAAATTCCCGACACTAAGATATGA 59.492 37.037 0.00 0.00 0.00 2.15
816 958 7.667557 TCCTAAATTCCCGACACTAAGATATG 58.332 38.462 0.00 0.00 0.00 1.78
817 959 7.850935 TCCTAAATTCCCGACACTAAGATAT 57.149 36.000 0.00 0.00 0.00 1.63
818 960 7.850935 ATCCTAAATTCCCGACACTAAGATA 57.149 36.000 0.00 0.00 0.00 1.98
819 961 6.749036 ATCCTAAATTCCCGACACTAAGAT 57.251 37.500 0.00 0.00 0.00 2.40
820 962 6.555463 AATCCTAAATTCCCGACACTAAGA 57.445 37.500 0.00 0.00 0.00 2.10
821 963 6.458342 GCAAATCCTAAATTCCCGACACTAAG 60.458 42.308 0.00 0.00 0.00 2.18
822 964 5.355910 GCAAATCCTAAATTCCCGACACTAA 59.644 40.000 0.00 0.00 0.00 2.24
823 965 4.879545 GCAAATCCTAAATTCCCGACACTA 59.120 41.667 0.00 0.00 0.00 2.74
824 966 3.694566 GCAAATCCTAAATTCCCGACACT 59.305 43.478 0.00 0.00 0.00 3.55
825 967 3.181490 GGCAAATCCTAAATTCCCGACAC 60.181 47.826 0.00 0.00 0.00 3.67
826 968 3.020984 GGCAAATCCTAAATTCCCGACA 58.979 45.455 0.00 0.00 0.00 4.35
827 969 3.020984 TGGCAAATCCTAAATTCCCGAC 58.979 45.455 0.00 0.00 35.26 4.79
828 970 3.053991 TCTGGCAAATCCTAAATTCCCGA 60.054 43.478 0.00 0.00 35.26 5.14
829 971 3.287222 TCTGGCAAATCCTAAATTCCCG 58.713 45.455 0.00 0.00 35.26 5.14
830 972 5.675684 TTTCTGGCAAATCCTAAATTCCC 57.324 39.130 0.00 0.00 35.26 3.97
831 973 7.278646 GTCATTTTCTGGCAAATCCTAAATTCC 59.721 37.037 0.00 0.00 35.26 3.01
832 974 7.278646 GGTCATTTTCTGGCAAATCCTAAATTC 59.721 37.037 0.00 0.00 35.26 2.17
833 975 7.105588 GGTCATTTTCTGGCAAATCCTAAATT 58.894 34.615 0.00 0.00 35.26 1.82
834 976 6.213195 TGGTCATTTTCTGGCAAATCCTAAAT 59.787 34.615 0.00 0.00 35.26 1.40
835 977 5.541868 TGGTCATTTTCTGGCAAATCCTAAA 59.458 36.000 0.00 0.00 35.26 1.85
836 978 5.083122 TGGTCATTTTCTGGCAAATCCTAA 58.917 37.500 0.00 0.00 35.26 2.69
837 979 4.671831 TGGTCATTTTCTGGCAAATCCTA 58.328 39.130 0.00 0.00 35.26 2.94
838 980 3.509442 TGGTCATTTTCTGGCAAATCCT 58.491 40.909 0.00 0.00 35.26 3.24
839 981 3.959535 TGGTCATTTTCTGGCAAATCC 57.040 42.857 0.00 0.00 0.00 3.01
840 982 8.496707 AATAATTGGTCATTTTCTGGCAAATC 57.503 30.769 0.00 0.00 31.63 2.17
841 983 9.603921 CTAATAATTGGTCATTTTCTGGCAAAT 57.396 29.630 0.00 0.00 34.43 2.32
842 984 8.592809 ACTAATAATTGGTCATTTTCTGGCAAA 58.407 29.630 0.00 0.00 0.00 3.68
843 985 8.133024 ACTAATAATTGGTCATTTTCTGGCAA 57.867 30.769 0.00 0.00 0.00 4.52
844 986 7.415095 CGACTAATAATTGGTCATTTTCTGGCA 60.415 37.037 0.00 0.00 40.74 4.92
845 987 6.912591 CGACTAATAATTGGTCATTTTCTGGC 59.087 38.462 0.00 0.00 40.74 4.85
846 988 8.122952 GTCGACTAATAATTGGTCATTTTCTGG 58.877 37.037 8.70 0.00 40.74 3.86
847 989 7.846107 CGTCGACTAATAATTGGTCATTTTCTG 59.154 37.037 14.70 0.00 40.74 3.02
848 990 7.011109 CCGTCGACTAATAATTGGTCATTTTCT 59.989 37.037 14.70 0.00 40.74 2.52
849 991 7.010738 TCCGTCGACTAATAATTGGTCATTTTC 59.989 37.037 14.70 0.00 40.74 2.29
850 992 6.819649 TCCGTCGACTAATAATTGGTCATTTT 59.180 34.615 14.70 0.00 40.74 1.82
851 993 6.342906 TCCGTCGACTAATAATTGGTCATTT 58.657 36.000 14.70 0.00 40.74 2.32
852 994 5.909477 TCCGTCGACTAATAATTGGTCATT 58.091 37.500 14.70 0.00 40.74 2.57
853 995 5.524971 TCCGTCGACTAATAATTGGTCAT 57.475 39.130 14.70 0.00 40.74 3.06
854 996 4.987408 TCCGTCGACTAATAATTGGTCA 57.013 40.909 14.70 0.00 40.74 4.02
855 997 7.935338 TTTATCCGTCGACTAATAATTGGTC 57.065 36.000 14.70 0.00 37.74 4.02
856 998 8.897872 ATTTTATCCGTCGACTAATAATTGGT 57.102 30.769 14.70 0.00 0.00 3.67
857 999 8.984764 TGATTTTATCCGTCGACTAATAATTGG 58.015 33.333 14.70 4.73 0.00 3.16
865 1007 9.199982 GGATTAATTGATTTTATCCGTCGACTA 57.800 33.333 14.70 1.58 0.00 2.59
866 1008 7.713507 TGGATTAATTGATTTTATCCGTCGACT 59.286 33.333 14.70 0.00 0.00 4.18
867 1009 7.857569 TGGATTAATTGATTTTATCCGTCGAC 58.142 34.615 5.18 5.18 0.00 4.20
868 1010 8.615878 ATGGATTAATTGATTTTATCCGTCGA 57.384 30.769 0.00 0.00 0.00 4.20
887 1029 8.985315 TTGACTGCAGATTAAAGATATGGATT 57.015 30.769 23.35 0.00 0.00 3.01
888 1030 8.985315 TTTGACTGCAGATTAAAGATATGGAT 57.015 30.769 23.35 0.00 0.00 3.41
889 1031 8.985315 ATTTGACTGCAGATTAAAGATATGGA 57.015 30.769 23.35 0.00 0.00 3.41
894 1036 9.559958 CGTTTTATTTGACTGCAGATTAAAGAT 57.440 29.630 23.35 7.23 0.00 2.40
895 1037 7.537306 GCGTTTTATTTGACTGCAGATTAAAGA 59.463 33.333 23.35 12.29 0.00 2.52
896 1038 7.538678 AGCGTTTTATTTGACTGCAGATTAAAG 59.461 33.333 23.35 6.57 0.00 1.85
897 1039 7.367285 AGCGTTTTATTTGACTGCAGATTAAA 58.633 30.769 23.35 17.35 0.00 1.52
898 1040 6.908825 AGCGTTTTATTTGACTGCAGATTAA 58.091 32.000 23.35 10.95 0.00 1.40
899 1041 6.494893 AGCGTTTTATTTGACTGCAGATTA 57.505 33.333 23.35 2.68 0.00 1.75
900 1042 5.376854 AGCGTTTTATTTGACTGCAGATT 57.623 34.783 23.35 0.00 0.00 2.40
901 1043 6.314784 GTTAGCGTTTTATTTGACTGCAGAT 58.685 36.000 23.35 5.72 0.00 2.90
902 1044 5.613795 CGTTAGCGTTTTATTTGACTGCAGA 60.614 40.000 23.35 0.00 0.00 4.26
903 1045 4.549599 CGTTAGCGTTTTATTTGACTGCAG 59.450 41.667 13.48 13.48 0.00 4.41
904 1046 4.211584 TCGTTAGCGTTTTATTTGACTGCA 59.788 37.500 0.00 0.00 39.49 4.41
905 1047 4.704457 TCGTTAGCGTTTTATTTGACTGC 58.296 39.130 0.00 0.00 39.49 4.40
906 1048 7.162062 GCTTATCGTTAGCGTTTTATTTGACTG 59.838 37.037 0.00 0.00 39.49 3.51
907 1049 7.178074 GCTTATCGTTAGCGTTTTATTTGACT 58.822 34.615 0.00 0.00 39.49 3.41
908 1050 7.346961 GCTTATCGTTAGCGTTTTATTTGAC 57.653 36.000 0.00 0.00 39.49 3.18
920 1062 4.982999 TGAGGATATCGCTTATCGTTAGC 58.017 43.478 0.00 0.00 38.08 3.09
921 1063 9.737427 AATATTGAGGATATCGCTTATCGTTAG 57.263 33.333 0.00 0.00 38.08 2.34
922 1064 9.516314 CAATATTGAGGATATCGCTTATCGTTA 57.484 33.333 10.04 0.00 38.08 3.18
923 1065 7.492669 CCAATATTGAGGATATCGCTTATCGTT 59.507 37.037 17.23 0.00 38.08 3.85
924 1066 6.980978 CCAATATTGAGGATATCGCTTATCGT 59.019 38.462 17.23 1.59 38.08 3.73
925 1067 6.980978 ACCAATATTGAGGATATCGCTTATCG 59.019 38.462 17.23 0.00 38.08 2.92
926 1068 8.607459 CAACCAATATTGAGGATATCGCTTATC 58.393 37.037 17.23 0.00 36.70 1.75
927 1069 7.066284 GCAACCAATATTGAGGATATCGCTTAT 59.934 37.037 17.23 0.00 30.50 1.73
928 1070 6.371548 GCAACCAATATTGAGGATATCGCTTA 59.628 38.462 17.23 0.00 30.50 3.09
929 1071 5.182001 GCAACCAATATTGAGGATATCGCTT 59.818 40.000 17.23 0.00 30.50 4.68
930 1072 4.697352 GCAACCAATATTGAGGATATCGCT 59.303 41.667 17.23 0.00 30.50 4.93
931 1073 4.455533 TGCAACCAATATTGAGGATATCGC 59.544 41.667 17.23 7.97 30.50 4.58
932 1074 6.373779 GTTGCAACCAATATTGAGGATATCG 58.626 40.000 19.15 0.03 32.75 2.92
933 1075 6.373779 CGTTGCAACCAATATTGAGGATATC 58.626 40.000 23.42 0.00 32.75 1.63
934 1076 5.278463 GCGTTGCAACCAATATTGAGGATAT 60.278 40.000 23.42 0.00 32.75 1.63
935 1077 4.036262 GCGTTGCAACCAATATTGAGGATA 59.964 41.667 23.42 0.00 32.75 2.59
936 1078 3.181487 GCGTTGCAACCAATATTGAGGAT 60.181 43.478 23.42 0.00 32.75 3.24
937 1079 2.163412 GCGTTGCAACCAATATTGAGGA 59.837 45.455 23.42 4.98 32.75 3.71
938 1080 2.094803 TGCGTTGCAACCAATATTGAGG 60.095 45.455 23.42 6.70 34.76 3.86
939 1081 2.916716 GTGCGTTGCAACCAATATTGAG 59.083 45.455 23.42 9.36 41.47 3.02
940 1082 2.666895 CGTGCGTTGCAACCAATATTGA 60.667 45.455 23.42 0.00 41.47 2.57
941 1083 1.648191 CGTGCGTTGCAACCAATATTG 59.352 47.619 23.42 8.58 41.47 1.90
942 1084 1.402194 CCGTGCGTTGCAACCAATATT 60.402 47.619 23.42 0.00 41.47 1.28
943 1085 0.170116 CCGTGCGTTGCAACCAATAT 59.830 50.000 23.42 0.00 41.47 1.28
944 1086 1.576920 CCGTGCGTTGCAACCAATA 59.423 52.632 23.42 4.91 41.47 1.90
945 1087 2.334653 CCGTGCGTTGCAACCAAT 59.665 55.556 23.42 0.00 41.47 3.16
946 1088 3.893763 CCCGTGCGTTGCAACCAA 61.894 61.111 23.42 9.32 41.47 3.67
949 1091 3.766496 AAAGCCCGTGCGTTGCAAC 62.766 57.895 19.89 19.89 41.47 4.17
950 1092 3.069980 AAAAGCCCGTGCGTTGCAA 62.070 52.632 0.00 0.00 41.47 4.08
951 1093 3.522731 AAAAGCCCGTGCGTTGCA 61.523 55.556 0.00 0.00 44.33 4.08
952 1094 3.029735 CAAAAGCCCGTGCGTTGC 61.030 61.111 0.00 0.00 44.33 4.17
953 1095 3.029735 GCAAAAGCCCGTGCGTTG 61.030 61.111 5.27 5.27 44.33 4.10
954 1096 3.216292 AGCAAAAGCCCGTGCGTT 61.216 55.556 0.00 0.00 45.62 4.84
955 1097 3.964875 CAGCAAAAGCCCGTGCGT 61.965 61.111 0.00 0.00 45.62 5.24
956 1098 4.705519 CCAGCAAAAGCCCGTGCG 62.706 66.667 0.00 0.00 45.62 5.34
957 1099 3.558099 GACCAGCAAAAGCCCGTGC 62.558 63.158 0.00 0.00 41.22 5.34
958 1100 1.526575 ATGACCAGCAAAAGCCCGTG 61.527 55.000 0.00 0.00 0.00 4.94
959 1101 0.037590 TATGACCAGCAAAAGCCCGT 59.962 50.000 0.00 0.00 0.00 5.28
960 1102 0.451783 GTATGACCAGCAAAAGCCCG 59.548 55.000 0.00 0.00 0.00 6.13
961 1103 0.817654 GGTATGACCAGCAAAAGCCC 59.182 55.000 0.00 0.00 38.42 5.19
962 1104 1.544724 TGGTATGACCAGCAAAAGCC 58.455 50.000 0.00 0.00 44.79 4.35
972 1114 0.107361 CGGGAGGGTTTGGTATGACC 60.107 60.000 0.00 0.00 39.22 4.02
973 1115 0.616891 ACGGGAGGGTTTGGTATGAC 59.383 55.000 0.00 0.00 0.00 3.06
1084 1231 2.746359 GGAGGAGATGATGGCCCG 59.254 66.667 0.00 0.00 0.00 6.13
1221 1368 1.041437 CAAGGACCCGGGAGACTATC 58.959 60.000 32.02 13.44 0.00 2.08
1351 1498 0.109086 ATGTTGACGAGGACGAGCAG 60.109 55.000 0.00 0.00 42.66 4.24
1352 1499 0.388520 CATGTTGACGAGGACGAGCA 60.389 55.000 0.00 0.00 42.66 4.26
1353 1500 1.687494 GCATGTTGACGAGGACGAGC 61.687 60.000 0.00 0.00 42.66 5.03
1370 1517 2.045634 GCTGAGGCTGGATGTGCA 60.046 61.111 0.00 0.00 35.22 4.57
1446 1593 1.371558 GAACGTCCAGAAGCCCAGT 59.628 57.895 0.00 0.00 0.00 4.00
1484 1631 3.096852 TGAGGAAGAAAGACATCGGCTA 58.903 45.455 0.00 0.00 0.00 3.93
1485 1632 1.902508 TGAGGAAGAAAGACATCGGCT 59.097 47.619 0.00 0.00 0.00 5.52
1491 1638 2.368875 GTGGAGGTGAGGAAGAAAGACA 59.631 50.000 0.00 0.00 0.00 3.41
1503 1650 5.698741 ACATATTGAGATTGTGGAGGTGA 57.301 39.130 0.00 0.00 0.00 4.02
1525 1672 5.022282 TGATCGCTCATGTCAATCCTTAA 57.978 39.130 0.00 0.00 0.00 1.85
1594 1741 1.067250 GCTTGTTTTGGGCGAGCAA 59.933 52.632 0.00 0.00 41.68 3.91
1645 1792 1.234615 CCTCCAACGACCACGCAATT 61.235 55.000 0.00 0.00 43.96 2.32
2001 2156 2.437281 GTGGATGGATCTCAGTGGATGT 59.563 50.000 0.00 0.00 0.00 3.06
2025 2180 6.633856 TGTTTTATAACCGTAGAGAAGACCC 58.366 40.000 0.00 0.00 33.15 4.46
2195 2350 7.873719 TTAACTGTTCTTGACTGATGGAAAA 57.126 32.000 0.00 0.00 0.00 2.29
2204 2359 9.376075 CATCATACTGATTAACTGTTCTTGACT 57.624 33.333 0.00 0.00 34.28 3.41
2251 2406 2.492881 CCATTATGTTTGGCTGCAGTGA 59.507 45.455 16.64 0.00 0.00 3.41
2254 2409 2.492881 TCACCATTATGTTTGGCTGCAG 59.507 45.455 10.11 10.11 37.81 4.41
2286 2441 2.281484 TTGACGCCTGGAAGCACC 60.281 61.111 0.00 0.00 39.54 5.01
2422 2583 4.944962 TCGCCAAATGATCAACTAACTG 57.055 40.909 0.00 0.00 0.00 3.16
2462 2625 8.377799 TCAGTTACATATATGGATCATGCTGTT 58.622 33.333 16.96 0.00 0.00 3.16
2463 2626 7.910584 TCAGTTACATATATGGATCATGCTGT 58.089 34.615 16.96 0.00 0.00 4.40
2529 2693 1.006102 GCCAGGTACGGATGGATCG 60.006 63.158 13.03 0.00 39.02 3.69
2585 2749 1.198094 TTTGATCGGACTGGCCTCCA 61.198 55.000 11.40 0.00 0.00 3.86
2737 2901 2.584791 CTCGTTCGGCAAGGAATTTTG 58.415 47.619 0.00 0.00 0.00 2.44
2741 2905 0.673644 CACCTCGTTCGGCAAGGAAT 60.674 55.000 5.64 0.00 34.16 3.01
2745 2909 0.443869 CATTCACCTCGTTCGGCAAG 59.556 55.000 0.00 0.00 0.00 4.01
2748 2912 0.108804 TCTCATTCACCTCGTTCGGC 60.109 55.000 0.00 0.00 0.00 5.54
2852 3016 3.420893 AGGTCGGATGATTTCTGCAAAA 58.579 40.909 0.00 0.00 0.00 2.44
2936 3100 3.887716 AGGCTTGGATTGATCTTGCATAC 59.112 43.478 0.00 0.00 0.00 2.39
2940 3104 2.652590 AGAGGCTTGGATTGATCTTGC 58.347 47.619 0.00 0.00 0.00 4.01
2959 3123 1.741706 AGCAGTCAATGATTCGCCAAG 59.258 47.619 0.00 0.00 0.00 3.61
2964 3128 4.176271 TCACTACAGCAGTCAATGATTCG 58.824 43.478 0.00 0.00 34.26 3.34
2972 3136 3.157087 TGTGATCTCACTACAGCAGTCA 58.843 45.455 11.35 0.00 46.55 3.41
2979 3143 8.902540 AACTTTAACATTGTGATCTCACTACA 57.097 30.769 11.35 0.00 46.55 2.74
3007 3173 1.342819 ACCGAAGAGATAGCATGCCTC 59.657 52.381 15.66 14.01 0.00 4.70
3024 3190 3.121738 AGTTGAGACCTGGTTTAACCG 57.878 47.619 9.77 4.50 42.58 4.44
3026 3192 5.011840 ACTCCTAGTTGAGACCTGGTTTAAC 59.988 44.000 0.00 7.19 36.22 2.01
3038 3204 6.439675 GTACTCTTGGTACTCCTAGTTGAG 57.560 45.833 0.00 0.00 45.25 3.02
3065 3231 5.782893 AGTTCTGCCAGCTTAGATACTAG 57.217 43.478 0.00 0.00 0.00 2.57
3066 3232 6.263392 CAGTAGTTCTGCCAGCTTAGATACTA 59.737 42.308 0.00 0.00 37.36 1.82
3097 3263 7.671302 AGATAACATGATAAGATAACGCTGGT 58.329 34.615 0.00 0.00 0.00 4.00
3128 3294 8.743085 AGTTGATTCATCACTAGTAATGCATT 57.257 30.769 17.56 17.56 36.36 3.56
3145 3311 8.547967 TTTCAGAACCACATAGTAGTTGATTC 57.452 34.615 0.00 0.00 0.00 2.52
3194 3360 5.383476 AGCATAGCAGAGAAAAATGGCTAT 58.617 37.500 0.00 0.00 45.77 2.97
3203 3369 3.988976 AACCAGAGCATAGCAGAGAAA 57.011 42.857 0.00 0.00 0.00 2.52
3218 3384 0.040425 GTGGCACGCTACAAAACCAG 60.040 55.000 0.00 0.00 35.02 4.00
3221 3387 0.237498 GAGGTGGCACGCTACAAAAC 59.763 55.000 12.17 0.00 39.78 2.43
3222 3388 0.107831 AGAGGTGGCACGCTACAAAA 59.892 50.000 12.17 0.00 39.78 2.44
3223 3389 0.602638 CAGAGGTGGCACGCTACAAA 60.603 55.000 12.17 0.00 39.78 2.83
3224 3390 1.005037 CAGAGGTGGCACGCTACAA 60.005 57.895 12.17 0.00 39.78 2.41
3225 3391 2.154798 GACAGAGGTGGCACGCTACA 62.155 60.000 12.17 0.00 39.78 2.74
3226 3392 1.446272 GACAGAGGTGGCACGCTAC 60.446 63.158 12.17 0.00 39.78 3.58
3227 3393 1.877576 CTGACAGAGGTGGCACGCTA 61.878 60.000 12.17 0.00 36.47 4.26
3228 3394 3.231889 CTGACAGAGGTGGCACGCT 62.232 63.158 12.17 9.91 36.47 5.07
3229 3395 2.740055 CTGACAGAGGTGGCACGC 60.740 66.667 12.17 6.27 36.47 5.34
3230 3396 0.532862 AAACTGACAGAGGTGGCACG 60.533 55.000 12.17 0.00 36.47 5.34
3231 3397 1.680338 AAAACTGACAGAGGTGGCAC 58.320 50.000 9.70 9.70 36.47 5.01
3232 3398 2.023673 CAAAAACTGACAGAGGTGGCA 58.976 47.619 10.08 0.00 40.51 4.92
3233 3399 2.024414 ACAAAAACTGACAGAGGTGGC 58.976 47.619 10.08 0.00 0.00 5.01
3234 3400 3.278574 TGACAAAAACTGACAGAGGTGG 58.721 45.455 10.08 0.00 0.00 4.61
3246 3412 7.001347 CCGCGATTTTAATCTTTGACAAAAAC 58.999 34.615 8.23 0.00 33.24 2.43
3247 3413 6.144724 CCCGCGATTTTAATCTTTGACAAAAA 59.855 34.615 8.23 0.00 33.24 1.94
3248 3414 5.631512 CCCGCGATTTTAATCTTTGACAAAA 59.368 36.000 8.23 0.00 33.24 2.44
3249 3415 5.048643 TCCCGCGATTTTAATCTTTGACAAA 60.049 36.000 8.23 0.00 33.24 2.83
3250 3416 4.456222 TCCCGCGATTTTAATCTTTGACAA 59.544 37.500 8.23 0.00 33.24 3.18
3251 3417 4.004314 TCCCGCGATTTTAATCTTTGACA 58.996 39.130 8.23 0.00 33.24 3.58
3252 3418 4.331717 TCTCCCGCGATTTTAATCTTTGAC 59.668 41.667 8.23 0.00 33.24 3.18
3253 3419 4.509616 TCTCCCGCGATTTTAATCTTTGA 58.490 39.130 8.23 0.00 33.24 2.69
3254 3420 4.875544 TCTCCCGCGATTTTAATCTTTG 57.124 40.909 8.23 0.00 33.24 2.77
3255 3421 5.890424 TTTCTCCCGCGATTTTAATCTTT 57.110 34.783 8.23 0.00 33.24 2.52
3256 3422 5.646360 TCTTTTCTCCCGCGATTTTAATCTT 59.354 36.000 8.23 0.00 33.24 2.40
3257 3423 5.183228 TCTTTTCTCCCGCGATTTTAATCT 58.817 37.500 8.23 0.00 33.24 2.40
3258 3424 5.479716 TCTTTTCTCCCGCGATTTTAATC 57.520 39.130 8.23 0.00 0.00 1.75
3259 3425 6.451064 AATCTTTTCTCCCGCGATTTTAAT 57.549 33.333 8.23 0.00 0.00 1.40
3260 3426 5.890424 AATCTTTTCTCCCGCGATTTTAA 57.110 34.783 8.23 0.00 0.00 1.52
3261 3427 5.446741 CGAAATCTTTTCTCCCGCGATTTTA 60.447 40.000 8.23 0.00 35.23 1.52
3262 3428 4.671766 CGAAATCTTTTCTCCCGCGATTTT 60.672 41.667 8.23 0.00 35.23 1.82
3263 3429 3.181510 CGAAATCTTTTCTCCCGCGATTT 60.182 43.478 8.23 1.37 37.11 2.17
3264 3430 2.351726 CGAAATCTTTTCTCCCGCGATT 59.648 45.455 8.23 0.00 0.00 3.34
3265 3431 1.933853 CGAAATCTTTTCTCCCGCGAT 59.066 47.619 8.23 0.00 0.00 4.58
3266 3432 1.355971 CGAAATCTTTTCTCCCGCGA 58.644 50.000 8.23 0.00 0.00 5.87
3267 3433 0.247695 GCGAAATCTTTTCTCCCGCG 60.248 55.000 0.00 0.00 0.00 6.46
3268 3434 0.247695 CGCGAAATCTTTTCTCCCGC 60.248 55.000 0.00 0.00 38.07 6.13
3269 3435 0.373716 CCGCGAAATCTTTTCTCCCG 59.626 55.000 8.23 0.00 0.00 5.14
3270 3436 1.130561 CACCGCGAAATCTTTTCTCCC 59.869 52.381 8.23 0.00 0.00 4.30
3271 3437 1.130561 CCACCGCGAAATCTTTTCTCC 59.869 52.381 8.23 0.00 0.00 3.71
3272 3438 1.465856 GCCACCGCGAAATCTTTTCTC 60.466 52.381 8.23 0.00 0.00 2.87
3273 3439 0.521735 GCCACCGCGAAATCTTTTCT 59.478 50.000 8.23 0.00 0.00 2.52
3274 3440 0.456142 GGCCACCGCGAAATCTTTTC 60.456 55.000 8.23 0.00 35.02 2.29
3275 3441 0.893727 AGGCCACCGCGAAATCTTTT 60.894 50.000 8.23 0.00 35.02 2.27
3276 3442 1.303317 AGGCCACCGCGAAATCTTT 60.303 52.632 8.23 0.00 35.02 2.52
3277 3443 1.745489 GAGGCCACCGCGAAATCTT 60.745 57.895 8.23 0.00 35.02 2.40
3278 3444 2.125106 GAGGCCACCGCGAAATCT 60.125 61.111 8.23 0.00 35.02 2.40
3279 3445 2.125106 AGAGGCCACCGCGAAATC 60.125 61.111 8.23 0.00 35.02 2.17
3280 3446 2.125106 GAGAGGCCACCGCGAAAT 60.125 61.111 8.23 0.00 35.02 2.17
3281 3447 4.388499 GGAGAGGCCACCGCGAAA 62.388 66.667 8.23 0.00 36.34 3.46
3287 3453 4.106925 CTGCTGGGAGAGGCCACC 62.107 72.222 5.01 5.17 38.95 4.61
3288 3454 4.792804 GCTGCTGGGAGAGGCCAC 62.793 72.222 5.01 0.00 38.95 5.01
3289 3455 2.903871 ATAGCTGCTGGGAGAGGCCA 62.904 60.000 13.43 0.00 38.95 5.36
3290 3456 0.833834 TATAGCTGCTGGGAGAGGCC 60.834 60.000 13.43 0.00 0.00 5.19
3291 3457 0.607620 CTATAGCTGCTGGGAGAGGC 59.392 60.000 13.43 0.00 0.00 4.70
3292 3458 1.617850 CACTATAGCTGCTGGGAGAGG 59.382 57.143 13.43 1.77 0.00 3.69
3293 3459 1.617850 CCACTATAGCTGCTGGGAGAG 59.382 57.143 13.43 1.41 0.00 3.20
3294 3460 1.709578 CCACTATAGCTGCTGGGAGA 58.290 55.000 13.43 0.00 0.00 3.71
3295 3461 0.034616 GCCACTATAGCTGCTGGGAG 59.965 60.000 13.43 8.91 0.00 4.30
3296 3462 1.410850 GGCCACTATAGCTGCTGGGA 61.411 60.000 13.43 0.00 0.00 4.37
3297 3463 1.072159 GGCCACTATAGCTGCTGGG 59.928 63.158 13.43 7.05 0.00 4.45
3298 3464 1.301244 CGGCCACTATAGCTGCTGG 60.301 63.158 13.43 6.45 0.00 4.85
3299 3465 4.350620 CGGCCACTATAGCTGCTG 57.649 61.111 13.43 10.27 0.00 4.41
3302 3468 0.608130 TATGGCGGCCACTATAGCTG 59.392 55.000 26.48 0.00 35.80 4.24
3303 3469 0.898320 CTATGGCGGCCACTATAGCT 59.102 55.000 26.48 9.24 35.80 3.32
3304 3470 0.741221 GCTATGGCGGCCACTATAGC 60.741 60.000 27.00 27.00 40.59 2.97
3305 3471 3.442996 GCTATGGCGGCCACTATAG 57.557 57.895 26.48 22.08 35.80 1.31
3323 3489 2.715864 CTATTTGCCGCGATTGCCCG 62.716 60.000 8.23 0.00 38.08 6.13
3324 3490 1.008538 CTATTTGCCGCGATTGCCC 60.009 57.895 8.23 0.00 38.08 5.36
3325 3491 1.658409 GCTATTTGCCGCGATTGCC 60.658 57.895 8.23 0.00 38.08 4.52
3326 3492 3.907893 GCTATTTGCCGCGATTGC 58.092 55.556 8.23 2.45 35.15 3.56
3347 3513 5.211078 TCATCTCCCCCATCAGAATTTTT 57.789 39.130 0.00 0.00 0.00 1.94
3348 3514 4.886755 TCATCTCCCCCATCAGAATTTT 57.113 40.909 0.00 0.00 0.00 1.82
3349 3515 5.414133 AATCATCTCCCCCATCAGAATTT 57.586 39.130 0.00 0.00 0.00 1.82
3350 3516 5.392125 GAAATCATCTCCCCCATCAGAATT 58.608 41.667 0.00 0.00 0.00 2.17
3351 3517 4.202652 GGAAATCATCTCCCCCATCAGAAT 60.203 45.833 0.00 0.00 0.00 2.40
3352 3518 3.139025 GGAAATCATCTCCCCCATCAGAA 59.861 47.826 0.00 0.00 0.00 3.02
3353 3519 2.713167 GGAAATCATCTCCCCCATCAGA 59.287 50.000 0.00 0.00 0.00 3.27
3354 3520 2.551721 CGGAAATCATCTCCCCCATCAG 60.552 54.545 0.00 0.00 0.00 2.90
3355 3521 1.421268 CGGAAATCATCTCCCCCATCA 59.579 52.381 0.00 0.00 0.00 3.07
3356 3522 1.271597 CCGGAAATCATCTCCCCCATC 60.272 57.143 0.00 0.00 0.00 3.51
3357 3523 0.773644 CCGGAAATCATCTCCCCCAT 59.226 55.000 0.00 0.00 0.00 4.00
3358 3524 0.327095 TCCGGAAATCATCTCCCCCA 60.327 55.000 0.00 0.00 0.00 4.96
3359 3525 0.398318 CTCCGGAAATCATCTCCCCC 59.602 60.000 5.23 0.00 0.00 5.40
3360 3526 0.398318 CCTCCGGAAATCATCTCCCC 59.602 60.000 5.23 0.00 0.00 4.81
3361 3527 0.398318 CCCTCCGGAAATCATCTCCC 59.602 60.000 5.23 0.00 0.00 4.30
3362 3528 1.132500 ACCCTCCGGAAATCATCTCC 58.868 55.000 5.23 0.00 0.00 3.71
3363 3529 3.283259 AAACCCTCCGGAAATCATCTC 57.717 47.619 5.23 0.00 0.00 2.75
3364 3530 3.356290 CAAAACCCTCCGGAAATCATCT 58.644 45.455 5.23 0.00 0.00 2.90
3365 3531 2.159240 GCAAAACCCTCCGGAAATCATC 60.159 50.000 5.23 0.00 0.00 2.92
3366 3532 1.824852 GCAAAACCCTCCGGAAATCAT 59.175 47.619 5.23 0.00 0.00 2.45
3367 3533 1.203001 AGCAAAACCCTCCGGAAATCA 60.203 47.619 5.23 0.00 0.00 2.57
3368 3534 1.472878 GAGCAAAACCCTCCGGAAATC 59.527 52.381 5.23 0.00 0.00 2.17
3369 3535 1.203001 TGAGCAAAACCCTCCGGAAAT 60.203 47.619 5.23 0.00 0.00 2.17
3370 3536 0.183971 TGAGCAAAACCCTCCGGAAA 59.816 50.000 5.23 0.00 0.00 3.13
3371 3537 0.404040 ATGAGCAAAACCCTCCGGAA 59.596 50.000 5.23 0.00 0.00 4.30
3372 3538 0.404040 AATGAGCAAAACCCTCCGGA 59.596 50.000 2.93 2.93 0.00 5.14
3373 3539 0.527565 CAATGAGCAAAACCCTCCGG 59.472 55.000 0.00 0.00 0.00 5.14
3374 3540 1.247567 ACAATGAGCAAAACCCTCCG 58.752 50.000 0.00 0.00 0.00 4.63
3375 3541 2.627699 TCAACAATGAGCAAAACCCTCC 59.372 45.455 0.00 0.00 0.00 4.30
3376 3542 3.905784 CTCAACAATGAGCAAAACCCTC 58.094 45.455 0.00 0.00 46.11 4.30
3387 3553 6.012337 TCCCTATAAATGGCTCAACAATGA 57.988 37.500 0.00 0.00 0.00 2.57
3388 3554 5.829924 ACTCCCTATAAATGGCTCAACAATG 59.170 40.000 0.00 0.00 0.00 2.82
3389 3555 6.018433 ACTCCCTATAAATGGCTCAACAAT 57.982 37.500 0.00 0.00 0.00 2.71
3390 3556 5.450818 ACTCCCTATAAATGGCTCAACAA 57.549 39.130 0.00 0.00 0.00 2.83
3391 3557 5.192927 CAACTCCCTATAAATGGCTCAACA 58.807 41.667 0.00 0.00 0.00 3.33
3392 3558 5.066505 CACAACTCCCTATAAATGGCTCAAC 59.933 44.000 0.00 0.00 0.00 3.18
3393 3559 5.192927 CACAACTCCCTATAAATGGCTCAA 58.807 41.667 0.00 0.00 0.00 3.02
3394 3560 4.385199 CCACAACTCCCTATAAATGGCTCA 60.385 45.833 0.00 0.00 0.00 4.26
3395 3561 4.137543 CCACAACTCCCTATAAATGGCTC 58.862 47.826 0.00 0.00 0.00 4.70
3396 3562 3.785887 TCCACAACTCCCTATAAATGGCT 59.214 43.478 0.00 0.00 0.00 4.75
3397 3563 4.137543 CTCCACAACTCCCTATAAATGGC 58.862 47.826 0.00 0.00 0.00 4.40
3398 3564 4.412199 TCCTCCACAACTCCCTATAAATGG 59.588 45.833 0.00 0.00 0.00 3.16
3399 3565 5.630415 TCCTCCACAACTCCCTATAAATG 57.370 43.478 0.00 0.00 0.00 2.32
3400 3566 6.848562 AATCCTCCACAACTCCCTATAAAT 57.151 37.500 0.00 0.00 0.00 1.40
3401 3567 6.631766 CGAAATCCTCCACAACTCCCTATAAA 60.632 42.308 0.00 0.00 0.00 1.40
3402 3568 5.163343 CGAAATCCTCCACAACTCCCTATAA 60.163 44.000 0.00 0.00 0.00 0.98
3403 3569 4.344102 CGAAATCCTCCACAACTCCCTATA 59.656 45.833 0.00 0.00 0.00 1.31
3404 3570 3.134804 CGAAATCCTCCACAACTCCCTAT 59.865 47.826 0.00 0.00 0.00 2.57
3405 3571 2.500098 CGAAATCCTCCACAACTCCCTA 59.500 50.000 0.00 0.00 0.00 3.53
3406 3572 1.279271 CGAAATCCTCCACAACTCCCT 59.721 52.381 0.00 0.00 0.00 4.20
3407 3573 1.739067 CGAAATCCTCCACAACTCCC 58.261 55.000 0.00 0.00 0.00 4.30
3408 3574 1.087501 GCGAAATCCTCCACAACTCC 58.912 55.000 0.00 0.00 0.00 3.85
3409 3575 0.721718 CGCGAAATCCTCCACAACTC 59.278 55.000 0.00 0.00 0.00 3.01
3410 3576 0.673644 CCGCGAAATCCTCCACAACT 60.674 55.000 8.23 0.00 0.00 3.16
3411 3577 1.794222 CCGCGAAATCCTCCACAAC 59.206 57.895 8.23 0.00 0.00 3.32
3412 3578 2.038269 GCCGCGAAATCCTCCACAA 61.038 57.895 8.23 0.00 0.00 3.33
3413 3579 2.435938 GCCGCGAAATCCTCCACA 60.436 61.111 8.23 0.00 0.00 4.17
3414 3580 2.435938 TGCCGCGAAATCCTCCAC 60.436 61.111 8.23 0.00 0.00 4.02
3415 3581 2.435938 GTGCCGCGAAATCCTCCA 60.436 61.111 8.23 0.00 0.00 3.86
3416 3582 3.202706 GGTGCCGCGAAATCCTCC 61.203 66.667 8.23 0.00 0.00 4.30
3417 3583 2.435938 TGGTGCCGCGAAATCCTC 60.436 61.111 8.23 0.00 0.00 3.71
3418 3584 2.436646 CTGGTGCCGCGAAATCCT 60.437 61.111 8.23 0.00 0.00 3.24
3419 3585 4.179579 GCTGGTGCCGCGAAATCC 62.180 66.667 8.23 5.09 0.00 3.01
3429 3595 1.066918 GCAATGCTATGGCTGGTGC 59.933 57.895 1.68 5.57 39.59 5.01
3430 3596 1.357690 CGCAATGCTATGGCTGGTG 59.642 57.895 2.94 0.00 39.59 4.17
3431 3597 1.825191 CCGCAATGCTATGGCTGGT 60.825 57.895 2.94 0.00 39.59 4.00
3432 3598 3.036577 CCGCAATGCTATGGCTGG 58.963 61.111 2.94 0.00 39.59 4.85
3433 3599 2.333938 GCCGCAATGCTATGGCTG 59.666 61.111 14.04 0.00 44.16 4.85
3434 3600 3.282157 CGCCGCAATGCTATGGCT 61.282 61.111 17.89 0.00 45.36 4.75
3435 3601 3.245948 CTCGCCGCAATGCTATGGC 62.246 63.158 11.76 11.76 44.09 4.40
3436 3602 2.610694 CCTCGCCGCAATGCTATGG 61.611 63.158 2.94 0.00 0.00 2.74
3437 3603 2.941333 CCTCGCCGCAATGCTATG 59.059 61.111 2.94 0.00 0.00 2.23
3438 3604 2.974698 GCCTCGCCGCAATGCTAT 60.975 61.111 2.94 0.00 0.00 2.97
3439 3605 4.161295 AGCCTCGCCGCAATGCTA 62.161 61.111 2.94 0.00 0.00 3.49
3442 3608 3.445518 TAGGAGCCTCGCCGCAATG 62.446 63.158 0.00 0.00 0.00 2.82
3443 3609 3.154473 TAGGAGCCTCGCCGCAAT 61.154 61.111 0.00 0.00 0.00 3.56
3444 3610 3.838271 CTAGGAGCCTCGCCGCAA 61.838 66.667 0.00 0.00 0.00 4.85
3448 3614 3.922640 CTGCCTAGGAGCCTCGCC 61.923 72.222 14.75 0.00 0.00 5.54
3449 3615 4.600576 GCTGCCTAGGAGCCTCGC 62.601 72.222 14.75 0.72 0.00 5.03
3450 3616 0.897863 ATAGCTGCCTAGGAGCCTCG 60.898 60.000 22.20 3.27 37.12 4.63
3451 3617 2.099405 CTATAGCTGCCTAGGAGCCTC 58.901 57.143 22.20 3.49 37.12 4.70
3452 3618 1.894978 GCTATAGCTGCCTAGGAGCCT 60.895 57.143 22.20 15.43 37.12 4.58
3453 3619 0.534873 GCTATAGCTGCCTAGGAGCC 59.465 60.000 22.20 7.11 37.12 4.70
3454 3620 0.172352 CGCTATAGCTGCCTAGGAGC 59.828 60.000 21.98 17.95 39.32 4.70
3455 3621 0.172352 GCGCTATAGCTGCCTAGGAG 59.828 60.000 21.98 8.40 39.32 3.69
3456 3622 0.539669 TGCGCTATAGCTGCCTAGGA 60.540 55.000 27.09 10.88 38.89 2.94
3457 3623 0.108898 CTGCGCTATAGCTGCCTAGG 60.109 60.000 27.09 3.67 38.89 3.02
3458 3624 3.415237 CTGCGCTATAGCTGCCTAG 57.585 57.895 27.09 19.22 38.89 3.02
3482 3648 0.100503 ATAGCCCGCAAAATTGTCGC 59.899 50.000 0.00 0.00 0.00 5.19
3483 3649 2.559998 AATAGCCCGCAAAATTGTCG 57.440 45.000 0.00 0.00 0.00 4.35
3484 3650 6.756542 AGATTAAAATAGCCCGCAAAATTGTC 59.243 34.615 0.00 0.00 0.00 3.18
3485 3651 6.639563 AGATTAAAATAGCCCGCAAAATTGT 58.360 32.000 0.00 0.00 0.00 2.71
3486 3652 8.702438 CATAGATTAAAATAGCCCGCAAAATTG 58.298 33.333 0.00 0.00 0.00 2.32
3487 3653 7.872483 CCATAGATTAAAATAGCCCGCAAAATT 59.128 33.333 0.00 0.00 0.00 1.82
3488 3654 7.015195 ACCATAGATTAAAATAGCCCGCAAAAT 59.985 33.333 0.00 0.00 0.00 1.82
3489 3655 6.322712 ACCATAGATTAAAATAGCCCGCAAAA 59.677 34.615 0.00 0.00 0.00 2.44
3490 3656 5.830991 ACCATAGATTAAAATAGCCCGCAAA 59.169 36.000 0.00 0.00 0.00 3.68
3491 3657 5.381757 ACCATAGATTAAAATAGCCCGCAA 58.618 37.500 0.00 0.00 0.00 4.85
3492 3658 4.980573 ACCATAGATTAAAATAGCCCGCA 58.019 39.130 0.00 0.00 0.00 5.69
3493 3659 5.959618 AACCATAGATTAAAATAGCCCGC 57.040 39.130 0.00 0.00 0.00 6.13
3494 3660 8.194769 ACAAAAACCATAGATTAAAATAGCCCG 58.805 33.333 0.00 0.00 0.00 6.13
3495 3661 9.884636 AACAAAAACCATAGATTAAAATAGCCC 57.115 29.630 0.00 0.00 0.00 5.19
3507 3673 9.904198 TCTGATGATATGAACAAAAACCATAGA 57.096 29.630 0.00 0.00 0.00 1.98
3510 3676 9.192642 TCATCTGATGATATGAACAAAAACCAT 57.807 29.630 16.06 0.00 33.59 3.55
3511 3677 8.578448 TCATCTGATGATATGAACAAAAACCA 57.422 30.769 16.06 0.00 33.59 3.67
3550 3716 3.366985 CCGGAAAATTTGTCAACCTAGCC 60.367 47.826 0.00 0.00 0.00 3.93
3564 3730 4.843728 TCTCTTTCATAGCACCGGAAAAT 58.156 39.130 9.46 0.00 30.87 1.82
3571 3737 6.739112 AGTTTGTTTTCTCTTTCATAGCACC 58.261 36.000 0.00 0.00 0.00 5.01
3580 3746 7.391148 TCTAGCACAAGTTTGTTTTCTCTTT 57.609 32.000 0.00 0.00 39.91 2.52
3583 3749 6.688813 CAGTTCTAGCACAAGTTTGTTTTCTC 59.311 38.462 0.00 0.00 39.91 2.87
3589 3755 6.318648 TCAATTCAGTTCTAGCACAAGTTTGT 59.681 34.615 0.00 0.00 43.36 2.83
3590 3756 6.728200 TCAATTCAGTTCTAGCACAAGTTTG 58.272 36.000 0.00 0.00 0.00 2.93
3630 3803 3.490590 CCTTTGTGCATGTAACAGCAACA 60.491 43.478 0.00 0.00 43.20 3.33
3640 3813 2.419021 GCAATATGGCCTTTGTGCATGT 60.419 45.455 16.74 0.00 32.29 3.21
3641 3814 2.159014 AGCAATATGGCCTTTGTGCATG 60.159 45.455 21.14 0.00 34.44 4.06
3660 3833 0.253327 AAGACCTTCCCCGATTCAGC 59.747 55.000 0.00 0.00 0.00 4.26
3670 3843 2.481276 GCCACACACAAAAAGACCTTCC 60.481 50.000 0.00 0.00 0.00 3.46
3681 3854 2.293122 GCTCAGTTATTGCCACACACAA 59.707 45.455 0.00 0.00 0.00 3.33
3687 3861 2.162408 GACCTTGCTCAGTTATTGCCAC 59.838 50.000 0.00 0.00 0.00 5.01
3694 3868 1.902508 CTCCCAGACCTTGCTCAGTTA 59.097 52.381 0.00 0.00 0.00 2.24
3722 3896 5.278169 CCTGTGTGGTTGAAATCTTCTTCTG 60.278 44.000 0.00 0.00 0.00 3.02
3727 3901 3.253432 GGTCCTGTGTGGTTGAAATCTTC 59.747 47.826 0.00 0.00 37.07 2.87
3739 3913 1.203523 GAGCTAGTCAGGTCCTGTGTG 59.796 57.143 18.65 8.74 42.38 3.82
3740 3914 1.551452 GAGCTAGTCAGGTCCTGTGT 58.449 55.000 18.65 9.54 42.38 3.72
3755 3929 1.197430 ACTTAGCAGGTGCAGGAGCT 61.197 55.000 10.97 10.97 45.16 4.09
3783 3957 0.824109 CAGCCGGATACAAGGTCAGA 59.176 55.000 5.05 0.00 0.00 3.27
3788 3962 6.053005 TCTAAAATAACAGCCGGATACAAGG 58.947 40.000 5.05 0.00 0.00 3.61
3798 3972 4.737649 GCCATTGCCTCTAAAATAACAGCC 60.738 45.833 0.00 0.00 0.00 4.85
3827 4001 9.227777 AGACTTACCATTAACTGTGTTATTTCC 57.772 33.333 0.00 0.00 0.00 3.13
3829 4003 9.787435 TGAGACTTACCATTAACTGTGTTATTT 57.213 29.630 0.00 0.00 0.00 1.40
3845 4019 6.560253 TGAAGCAAAGATTTGAGACTTACC 57.440 37.500 9.44 0.00 40.55 2.85
3889 4063 1.548269 GTGAGACTGGAGAAGTGGAGG 59.452 57.143 0.00 0.00 40.07 4.30
3895 4069 3.415237 CAGCGTGAGACTGGAGAAG 57.585 57.895 0.00 0.00 33.55 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.