Multiple sequence alignment - TraesCS2A01G176700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G176700 chr2A 100.000 2866 0 0 1 2866 136120647 136123512 0.000000e+00 5293.0
1 TraesCS2A01G176700 chr2A 100.000 1474 0 0 3967 5440 136124613 136126086 0.000000e+00 2723.0
2 TraesCS2A01G176700 chr2A 92.500 320 15 7 1 316 23632423 23632109 2.990000e-122 449.0
3 TraesCS2A01G176700 chr2A 97.710 131 3 0 4111 4241 136124613 136124743 5.480000e-55 226.0
4 TraesCS2A01G176700 chr2A 97.710 131 3 0 3967 4097 136124757 136124887 5.480000e-55 226.0
5 TraesCS2A01G176700 chr2A 94.444 54 2 1 2814 2866 136123339 136123392 1.260000e-11 82.4
6 TraesCS2A01G176700 chr2A 94.444 54 2 1 2693 2746 136123460 136123512 1.260000e-11 82.4
7 TraesCS2A01G176700 chr2D 92.468 2496 123 21 397 2861 129348038 129350499 0.000000e+00 3507.0
8 TraesCS2A01G176700 chr2D 93.654 520 22 4 4231 4748 129351687 129352197 0.000000e+00 767.0
9 TraesCS2A01G176700 chr2D 88.337 403 30 6 5046 5440 129789006 129789399 8.250000e-128 468.0
10 TraesCS2A01G176700 chr2D 93.309 269 18 0 5172 5440 129352954 129353222 1.100000e-106 398.0
11 TraesCS2A01G176700 chr2D 89.219 269 29 0 5172 5440 136181691 136181423 2.430000e-88 337.0
12 TraesCS2A01G176700 chr2D 88.446 251 21 6 4915 5164 136181968 136181725 4.120000e-76 296.0
13 TraesCS2A01G176700 chr2D 87.549 257 18 10 4740 4984 129352514 129352768 8.920000e-73 285.0
14 TraesCS2A01G176700 chr2D 86.111 144 20 0 2695 2838 129350885 129351028 7.300000e-34 156.0
15 TraesCS2A01G176700 chr2D 88.800 125 14 0 2742 2866 129350872 129350996 2.620000e-33 154.0
16 TraesCS2A01G176700 chr2D 83.704 135 12 7 5046 5171 129352770 129352903 9.570000e-23 119.0
17 TraesCS2A01G176700 chr2D 95.385 65 3 0 2802 2866 129350872 129350936 2.680000e-18 104.0
18 TraesCS2A01G176700 chr2D 92.593 54 3 1 2814 2866 129350331 129350384 5.840000e-10 76.8
19 TraesCS2A01G176700 chr2B 90.679 2607 159 31 317 2866 182930956 182933535 0.000000e+00 3391.0
20 TraesCS2A01G176700 chr2B 91.514 436 29 5 4231 4662 182935045 182935476 1.300000e-165 593.0
21 TraesCS2A01G176700 chr2B 93.717 382 23 1 5060 5440 182936171 182936552 6.110000e-159 571.0
22 TraesCS2A01G176700 chr2B 89.409 406 31 5 5046 5440 183129042 183129446 8.130000e-138 501.0
23 TraesCS2A01G176700 chr2B 89.163 406 31 6 5046 5440 183012952 183013355 1.360000e-135 494.0
24 TraesCS2A01G176700 chr2B 88.177 406 35 6 5046 5440 183060668 183061071 6.380000e-129 472.0
25 TraesCS2A01G176700 chr2B 87.841 403 33 7 5046 5440 183198986 183199380 4.970000e-125 459.0
26 TraesCS2A01G176700 chr2B 86.667 405 41 7 5047 5440 182959450 182959852 2.330000e-118 436.0
27 TraesCS2A01G176700 chr2B 91.746 315 20 5 1 315 474679895 474679587 3.010000e-117 433.0
28 TraesCS2A01G176700 chr2B 91.813 171 13 1 4744 4913 182959215 182959385 2.530000e-58 237.0
29 TraesCS2A01G176700 chr2B 82.879 257 26 13 4740 4984 183012700 183012950 1.190000e-51 215.0
30 TraesCS2A01G176700 chr2B 89.865 148 7 3 317 463 182928981 182929121 3.350000e-42 183.0
31 TraesCS2A01G176700 chr2B 93.333 75 5 0 2695 2769 182933484 182933558 1.600000e-20 111.0
32 TraesCS2A01G176700 chr2B 86.517 89 2 2 4660 4748 182935568 182935646 7.510000e-14 89.8
33 TraesCS2A01G176700 chr1B 96.203 316 9 2 1 316 616615009 616615321 1.040000e-141 514.0
34 TraesCS2A01G176700 chr7A 95.541 314 10 3 1 314 498601411 498601720 2.930000e-137 499.0
35 TraesCS2A01G176700 chr7A 87.004 277 30 3 2 278 525158172 525157902 1.900000e-79 307.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G176700 chr2A 136120647 136126086 5439 False 1438.800000 5293 97.384667 1 5440 6 chr2A.!!$F1 5439
1 TraesCS2A01G176700 chr2D 129348038 129353222 5184 False 618.533333 3507 90.397000 397 5440 9 chr2D.!!$F2 5043
2 TraesCS2A01G176700 chr2D 136181423 136181968 545 True 316.500000 337 88.832500 4915 5440 2 chr2D.!!$R1 525
3 TraesCS2A01G176700 chr2B 182928981 182936552 7571 False 823.133333 3391 90.937500 317 5440 6 chr2B.!!$F4 5123
4 TraesCS2A01G176700 chr2B 183012700 183013355 655 False 354.500000 494 86.021000 4740 5440 2 chr2B.!!$F6 700
5 TraesCS2A01G176700 chr2B 182959215 182959852 637 False 336.500000 436 89.240000 4744 5440 2 chr2B.!!$F5 696

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
154 155 0.240678 GCATGTGAAATGTGCCACGA 59.759 50.0 0.00 0.0 36.15 4.35 F
843 2853 0.249911 AGATTCCGCGTCAATAGCCC 60.250 55.0 4.92 0.0 0.00 5.19 F
1846 3863 0.381801 CCACGGATAATGGCAAGCAC 59.618 55.0 0.00 0.0 0.00 4.40 F
2515 4557 0.186143 TGGCAATGGTGGTGGTTACA 59.814 50.0 0.00 0.0 0.00 2.41 F
2679 4724 1.063806 GCGGCGAGTATTCTAGCATG 58.936 55.0 12.98 0.0 42.61 4.06 F
2780 4825 1.204146 AGCTATGGTAGTGGTGGTGG 58.796 55.0 0.00 0.0 0.00 4.61 F
4049 6608 0.676782 GCGCTGGTGGGTACAATTCT 60.677 55.0 0.00 0.0 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1295 3305 0.827089 TGTGCCACACCAATTGGGAG 60.827 55.000 27.89 21.09 41.15 4.30 R
2207 4231 0.462759 CGCAAGAATCAGGGGAGGTC 60.463 60.000 0.00 0.00 43.02 3.85 R
2658 4703 1.729838 GCTAGAATACTCGCCGCCG 60.730 63.158 0.00 0.00 0.00 6.46 R
3966 6443 0.040067 CTGAAACGGCCAGTGCTTTC 60.040 55.000 2.24 3.86 37.74 2.62 R
3989 6548 0.169672 CAGCAACAGCAGAATTCCCG 59.830 55.000 0.65 0.00 0.00 5.14 R
4122 6681 0.179189 GAATTCCCGCTGCTGAAACG 60.179 55.000 0.00 0.00 0.00 3.60 R
4984 8056 0.250295 AATGTGGTGGTGAGGACACG 60.250 55.000 0.00 0.00 46.77 4.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.555123 GAGGATTTGGCACTTCGCA 58.445 52.632 0.00 0.00 45.17 5.10
19 20 0.881118 GAGGATTTGGCACTTCGCAA 59.119 50.000 0.00 0.00 45.17 4.85
20 21 0.883833 AGGATTTGGCACTTCGCAAG 59.116 50.000 0.00 0.00 45.17 4.01
34 35 3.217599 TCGCAAGATCCATATCGCTAC 57.782 47.619 0.00 0.00 45.01 3.58
35 36 2.094700 TCGCAAGATCCATATCGCTACC 60.095 50.000 0.00 0.00 45.01 3.18
36 37 2.263077 GCAAGATCCATATCGCTACCG 58.737 52.381 0.00 0.00 37.19 4.02
37 38 5.508645 CGCAAGATCCATATCGCTACCGA 62.509 52.174 0.00 0.00 45.15 4.69
47 48 2.904697 TCGCTACCGACTATCTGAGA 57.095 50.000 0.00 0.00 38.82 3.27
48 49 2.756829 TCGCTACCGACTATCTGAGAG 58.243 52.381 0.00 0.00 38.82 3.20
49 50 2.102757 TCGCTACCGACTATCTGAGAGT 59.897 50.000 4.34 4.34 38.82 3.24
50 51 2.477375 CGCTACCGACTATCTGAGAGTC 59.523 54.545 19.74 19.74 40.02 3.36
51 52 3.468770 GCTACCGACTATCTGAGAGTCA 58.531 50.000 26.49 10.90 42.97 3.41
52 53 4.069304 GCTACCGACTATCTGAGAGTCAT 58.931 47.826 26.49 18.12 42.97 3.06
53 54 5.239351 GCTACCGACTATCTGAGAGTCATA 58.761 45.833 26.49 18.24 42.97 2.15
54 55 5.121142 GCTACCGACTATCTGAGAGTCATAC 59.879 48.000 26.49 11.13 42.97 2.39
55 56 5.037383 ACCGACTATCTGAGAGTCATACA 57.963 43.478 26.49 0.00 42.97 2.29
56 57 5.626142 ACCGACTATCTGAGAGTCATACAT 58.374 41.667 26.49 8.56 42.97 2.29
57 58 5.471797 ACCGACTATCTGAGAGTCATACATG 59.528 44.000 26.49 12.58 42.97 3.21
58 59 5.703130 CCGACTATCTGAGAGTCATACATGA 59.297 44.000 26.49 0.00 42.97 3.07
59 60 6.128309 CCGACTATCTGAGAGTCATACATGAG 60.128 46.154 26.49 11.41 42.97 2.90
60 61 6.573664 ACTATCTGAGAGTCATACATGAGC 57.426 41.667 0.00 0.00 37.51 4.26
61 62 6.306199 ACTATCTGAGAGTCATACATGAGCT 58.694 40.000 0.00 0.00 37.51 4.09
62 63 6.777091 ACTATCTGAGAGTCATACATGAGCTT 59.223 38.462 0.00 0.00 37.51 3.74
63 64 7.941790 ACTATCTGAGAGTCATACATGAGCTTA 59.058 37.037 0.00 0.00 37.51 3.09
64 65 7.594351 ATCTGAGAGTCATACATGAGCTTAA 57.406 36.000 0.00 0.00 37.51 1.85
65 66 7.036996 TCTGAGAGTCATACATGAGCTTAAG 57.963 40.000 0.00 0.00 37.51 1.85
66 67 6.040278 TCTGAGAGTCATACATGAGCTTAAGG 59.960 42.308 0.00 0.00 37.51 2.69
67 68 5.893824 TGAGAGTCATACATGAGCTTAAGGA 59.106 40.000 0.00 0.00 37.51 3.36
68 69 6.040278 TGAGAGTCATACATGAGCTTAAGGAG 59.960 42.308 0.00 0.00 37.51 3.69
69 70 6.132658 AGAGTCATACATGAGCTTAAGGAGA 58.867 40.000 0.00 0.00 37.51 3.71
70 71 6.040391 AGAGTCATACATGAGCTTAAGGAGAC 59.960 42.308 0.00 0.00 37.51 3.36
71 72 5.658634 AGTCATACATGAGCTTAAGGAGACA 59.341 40.000 0.00 0.00 37.51 3.41
72 73 5.982516 GTCATACATGAGCTTAAGGAGACAG 59.017 44.000 0.00 0.00 37.51 3.51
73 74 5.893824 TCATACATGAGCTTAAGGAGACAGA 59.106 40.000 0.00 0.00 32.11 3.41
74 75 4.734398 ACATGAGCTTAAGGAGACAGAG 57.266 45.455 0.00 0.00 0.00 3.35
75 76 3.118811 ACATGAGCTTAAGGAGACAGAGC 60.119 47.826 0.00 0.00 33.61 4.09
76 77 2.529632 TGAGCTTAAGGAGACAGAGCA 58.470 47.619 4.29 0.00 35.19 4.26
77 78 2.495270 TGAGCTTAAGGAGACAGAGCAG 59.505 50.000 4.29 0.00 35.19 4.24
78 79 2.495669 GAGCTTAAGGAGACAGAGCAGT 59.504 50.000 4.29 0.00 35.19 4.40
79 80 2.233431 AGCTTAAGGAGACAGAGCAGTG 59.767 50.000 4.29 0.00 35.19 3.66
80 81 2.028567 GCTTAAGGAGACAGAGCAGTGT 60.029 50.000 4.29 0.00 33.63 3.55
81 82 3.583806 CTTAAGGAGACAGAGCAGTGTG 58.416 50.000 0.00 0.00 0.00 3.82
82 83 0.683973 AAGGAGACAGAGCAGTGTGG 59.316 55.000 0.00 0.00 0.00 4.17
83 84 0.470833 AGGAGACAGAGCAGTGTGGT 60.471 55.000 0.00 0.00 0.00 4.16
84 85 0.320247 GGAGACAGAGCAGTGTGGTG 60.320 60.000 0.00 0.00 0.00 4.17
85 86 0.676184 GAGACAGAGCAGTGTGGTGA 59.324 55.000 0.00 0.00 0.00 4.02
86 87 1.069204 GAGACAGAGCAGTGTGGTGAA 59.931 52.381 0.00 0.00 0.00 3.18
87 88 1.696336 AGACAGAGCAGTGTGGTGAAT 59.304 47.619 0.00 0.00 0.00 2.57
88 89 2.899900 AGACAGAGCAGTGTGGTGAATA 59.100 45.455 0.00 0.00 0.00 1.75
89 90 2.996621 GACAGAGCAGTGTGGTGAATAC 59.003 50.000 0.00 0.00 0.00 1.89
90 91 2.634940 ACAGAGCAGTGTGGTGAATACT 59.365 45.455 0.00 0.00 0.00 2.12
92 93 2.634940 AGAGCAGTGTGGTGAATACTGT 59.365 45.455 0.00 0.00 46.70 3.55
93 94 3.832490 AGAGCAGTGTGGTGAATACTGTA 59.168 43.478 0.00 0.00 46.70 2.74
94 95 4.467795 AGAGCAGTGTGGTGAATACTGTAT 59.532 41.667 0.00 0.00 46.70 2.29
95 96 4.507710 AGCAGTGTGGTGAATACTGTATG 58.492 43.478 0.22 0.00 46.70 2.39
96 97 4.222810 AGCAGTGTGGTGAATACTGTATGA 59.777 41.667 0.22 0.00 46.70 2.15
97 98 5.104776 AGCAGTGTGGTGAATACTGTATGAT 60.105 40.000 0.22 0.00 46.70 2.45
98 99 6.098266 AGCAGTGTGGTGAATACTGTATGATA 59.902 38.462 0.22 0.00 46.70 2.15
99 100 6.422100 GCAGTGTGGTGAATACTGTATGATAG 59.578 42.308 0.22 0.00 46.70 2.08
100 101 7.492524 CAGTGTGGTGAATACTGTATGATAGT 58.507 38.462 0.22 0.00 41.71 2.12
101 102 7.436376 CAGTGTGGTGAATACTGTATGATAGTG 59.564 40.741 0.22 0.00 41.71 2.74
102 103 7.342026 AGTGTGGTGAATACTGTATGATAGTGA 59.658 37.037 0.22 0.00 0.00 3.41
103 104 7.979537 GTGTGGTGAATACTGTATGATAGTGAA 59.020 37.037 0.22 0.00 0.00 3.18
104 105 8.197439 TGTGGTGAATACTGTATGATAGTGAAG 58.803 37.037 0.22 0.00 0.00 3.02
105 106 7.653713 GTGGTGAATACTGTATGATAGTGAAGG 59.346 40.741 0.22 0.00 0.00 3.46
106 107 7.563556 TGGTGAATACTGTATGATAGTGAAGGA 59.436 37.037 0.22 0.00 0.00 3.36
107 108 8.085296 GGTGAATACTGTATGATAGTGAAGGAG 58.915 40.741 0.22 0.00 0.00 3.69
108 109 8.851145 GTGAATACTGTATGATAGTGAAGGAGA 58.149 37.037 0.22 0.00 0.00 3.71
109 110 9.593565 TGAATACTGTATGATAGTGAAGGAGAT 57.406 33.333 0.22 0.00 0.00 2.75
114 115 9.427821 ACTGTATGATAGTGAAGGAGATTAACT 57.572 33.333 0.00 0.00 36.49 2.24
115 116 9.906660 CTGTATGATAGTGAAGGAGATTAACTC 57.093 37.037 0.00 0.00 44.24 3.01
116 117 9.647918 TGTATGATAGTGAAGGAGATTAACTCT 57.352 33.333 0.00 0.00 44.37 3.24
127 128 5.927954 GAGATTAACTCTCGTAGATCCGT 57.072 43.478 0.00 0.00 41.07 4.69
128 129 6.303021 GAGATTAACTCTCGTAGATCCGTT 57.697 41.667 0.00 0.00 41.07 4.44
129 130 6.696441 AGATTAACTCTCGTAGATCCGTTT 57.304 37.500 0.00 0.00 33.89 3.60
130 131 7.098074 AGATTAACTCTCGTAGATCCGTTTT 57.902 36.000 0.00 0.00 33.89 2.43
131 132 7.545489 AGATTAACTCTCGTAGATCCGTTTTT 58.455 34.615 0.00 0.00 33.89 1.94
153 154 2.728132 GCATGTGAAATGTGCCACG 58.272 52.632 0.00 0.00 36.15 4.94
154 155 0.240678 GCATGTGAAATGTGCCACGA 59.759 50.000 0.00 0.00 36.15 4.35
155 156 1.730121 GCATGTGAAATGTGCCACGAG 60.730 52.381 0.00 0.00 36.15 4.18
156 157 0.523072 ATGTGAAATGTGCCACGAGC 59.477 50.000 0.00 0.00 44.14 5.03
172 173 4.094684 GCAGAGCGCGAGTACAAT 57.905 55.556 12.10 0.00 0.00 2.71
173 174 2.373938 GCAGAGCGCGAGTACAATT 58.626 52.632 12.10 0.00 0.00 2.32
174 175 0.721718 GCAGAGCGCGAGTACAATTT 59.278 50.000 12.10 0.00 0.00 1.82
175 176 1.128692 GCAGAGCGCGAGTACAATTTT 59.871 47.619 12.10 0.00 0.00 1.82
176 177 2.762472 CAGAGCGCGAGTACAATTTTG 58.238 47.619 12.10 0.00 0.00 2.44
177 178 2.411748 CAGAGCGCGAGTACAATTTTGA 59.588 45.455 12.10 0.00 0.00 2.69
178 179 2.668457 AGAGCGCGAGTACAATTTTGAG 59.332 45.455 12.10 0.00 0.00 3.02
179 180 1.732259 AGCGCGAGTACAATTTTGAGG 59.268 47.619 12.10 0.00 0.00 3.86
180 181 1.790481 GCGCGAGTACAATTTTGAGGC 60.790 52.381 12.10 0.00 0.00 4.70
181 182 1.732259 CGCGAGTACAATTTTGAGGCT 59.268 47.619 0.00 0.00 0.00 4.58
182 183 2.222819 CGCGAGTACAATTTTGAGGCTC 60.223 50.000 7.79 7.79 0.00 4.70
183 184 2.742053 GCGAGTACAATTTTGAGGCTCA 59.258 45.455 14.43 14.43 0.00 4.26
184 185 3.375299 GCGAGTACAATTTTGAGGCTCAT 59.625 43.478 19.50 4.52 0.00 2.90
185 186 4.570772 GCGAGTACAATTTTGAGGCTCATA 59.429 41.667 19.50 11.19 0.00 2.15
186 187 5.502544 GCGAGTACAATTTTGAGGCTCATAC 60.503 44.000 19.50 15.77 0.00 2.39
187 188 5.812642 CGAGTACAATTTTGAGGCTCATACT 59.187 40.000 19.50 20.09 0.00 2.12
188 189 6.978659 CGAGTACAATTTTGAGGCTCATACTA 59.021 38.462 19.50 0.00 0.00 1.82
189 190 7.653713 CGAGTACAATTTTGAGGCTCATACTAT 59.346 37.037 19.50 6.68 0.00 2.12
190 191 9.331282 GAGTACAATTTTGAGGCTCATACTATT 57.669 33.333 19.50 12.07 0.00 1.73
191 192 9.113838 AGTACAATTTTGAGGCTCATACTATTG 57.886 33.333 19.50 22.77 0.00 1.90
192 193 6.799512 ACAATTTTGAGGCTCATACTATTGC 58.200 36.000 25.08 0.22 0.00 3.56
193 194 6.604795 ACAATTTTGAGGCTCATACTATTGCT 59.395 34.615 25.08 16.66 0.00 3.91
194 195 7.775093 ACAATTTTGAGGCTCATACTATTGCTA 59.225 33.333 25.08 7.42 0.00 3.49
195 196 8.623903 CAATTTTGAGGCTCATACTATTGCTAA 58.376 33.333 19.50 2.25 0.00 3.09
196 197 7.792374 TTTTGAGGCTCATACTATTGCTAAG 57.208 36.000 19.50 0.00 0.00 2.18
197 198 6.731292 TTGAGGCTCATACTATTGCTAAGA 57.269 37.500 19.50 0.00 0.00 2.10
198 199 6.924913 TGAGGCTCATACTATTGCTAAGAT 57.075 37.500 14.43 0.00 0.00 2.40
199 200 6.695429 TGAGGCTCATACTATTGCTAAGATG 58.305 40.000 14.43 0.00 0.00 2.90
200 201 6.047511 AGGCTCATACTATTGCTAAGATGG 57.952 41.667 0.00 0.00 0.00 3.51
201 202 4.633565 GGCTCATACTATTGCTAAGATGGC 59.366 45.833 0.00 0.00 0.00 4.40
202 203 5.486526 GCTCATACTATTGCTAAGATGGCT 58.513 41.667 0.00 0.00 0.00 4.75
203 204 5.350914 GCTCATACTATTGCTAAGATGGCTG 59.649 44.000 0.00 0.00 0.00 4.85
204 205 5.240891 TCATACTATTGCTAAGATGGCTGC 58.759 41.667 0.00 0.00 0.00 5.25
205 206 3.853355 ACTATTGCTAAGATGGCTGCT 57.147 42.857 0.00 0.00 0.00 4.24
206 207 4.963318 ACTATTGCTAAGATGGCTGCTA 57.037 40.909 0.00 0.00 0.00 3.49
207 208 4.892433 ACTATTGCTAAGATGGCTGCTAG 58.108 43.478 0.00 0.00 0.00 3.42
208 209 1.959042 TTGCTAAGATGGCTGCTAGC 58.041 50.000 8.10 8.10 41.46 3.42
209 210 1.126488 TGCTAAGATGGCTGCTAGCT 58.874 50.000 17.23 8.52 41.99 3.32
210 211 1.487976 TGCTAAGATGGCTGCTAGCTT 59.512 47.619 19.93 19.93 41.99 3.74
211 212 1.872313 GCTAAGATGGCTGCTAGCTTG 59.128 52.381 23.89 15.26 41.99 4.01
212 213 2.492012 CTAAGATGGCTGCTAGCTTGG 58.508 52.381 23.89 18.25 41.99 3.61
213 214 0.914644 AAGATGGCTGCTAGCTTGGA 59.085 50.000 15.74 0.00 41.99 3.53
214 215 1.138568 AGATGGCTGCTAGCTTGGAT 58.861 50.000 17.23 2.95 41.99 3.41
215 216 1.202782 AGATGGCTGCTAGCTTGGATG 60.203 52.381 17.23 0.63 41.99 3.51
216 217 0.549950 ATGGCTGCTAGCTTGGATGT 59.450 50.000 17.23 0.00 41.99 3.06
217 218 0.393402 TGGCTGCTAGCTTGGATGTG 60.393 55.000 17.23 0.00 41.99 3.21
218 219 1.099879 GGCTGCTAGCTTGGATGTGG 61.100 60.000 17.23 0.00 41.99 4.17
219 220 1.099879 GCTGCTAGCTTGGATGTGGG 61.100 60.000 17.23 0.00 38.45 4.61
220 221 0.543277 CTGCTAGCTTGGATGTGGGA 59.457 55.000 17.23 0.00 0.00 4.37
221 222 0.253044 TGCTAGCTTGGATGTGGGAC 59.747 55.000 17.23 0.00 0.00 4.46
222 223 0.811616 GCTAGCTTGGATGTGGGACG 60.812 60.000 7.70 0.00 0.00 4.79
223 224 0.537188 CTAGCTTGGATGTGGGACGT 59.463 55.000 0.00 0.00 0.00 4.34
224 225 0.535335 TAGCTTGGATGTGGGACGTC 59.465 55.000 7.13 7.13 33.46 4.34
225 226 1.003839 GCTTGGATGTGGGACGTCA 60.004 57.895 18.91 0.00 35.87 4.35
226 227 0.392998 GCTTGGATGTGGGACGTCAT 60.393 55.000 18.91 2.01 35.87 3.06
227 228 1.950484 GCTTGGATGTGGGACGTCATT 60.950 52.381 18.91 0.00 35.87 2.57
228 229 2.436417 CTTGGATGTGGGACGTCATTT 58.564 47.619 18.91 0.00 35.87 2.32
229 230 1.819928 TGGATGTGGGACGTCATTTG 58.180 50.000 18.91 0.00 35.87 2.32
230 231 1.073125 TGGATGTGGGACGTCATTTGT 59.927 47.619 18.91 0.00 35.87 2.83
231 232 1.468520 GGATGTGGGACGTCATTTGTG 59.531 52.381 18.91 0.00 35.87 3.33
232 233 1.468520 GATGTGGGACGTCATTTGTGG 59.531 52.381 18.91 0.00 34.36 4.17
233 234 1.169661 TGTGGGACGTCATTTGTGGC 61.170 55.000 18.91 0.00 0.00 5.01
234 235 0.889186 GTGGGACGTCATTTGTGGCT 60.889 55.000 18.91 0.00 0.00 4.75
235 236 0.605319 TGGGACGTCATTTGTGGCTC 60.605 55.000 18.91 0.00 0.00 4.70
236 237 0.321653 GGGACGTCATTTGTGGCTCT 60.322 55.000 18.91 0.00 0.00 4.09
237 238 1.079503 GGACGTCATTTGTGGCTCTC 58.920 55.000 18.91 0.00 0.00 3.20
238 239 1.079503 GACGTCATTTGTGGCTCTCC 58.920 55.000 11.55 0.00 0.00 3.71
239 240 0.396435 ACGTCATTTGTGGCTCTCCA 59.604 50.000 0.00 0.00 40.85 3.86
240 241 1.202758 ACGTCATTTGTGGCTCTCCAA 60.203 47.619 0.00 0.00 45.53 3.53
241 242 2.086869 CGTCATTTGTGGCTCTCCAAT 58.913 47.619 0.00 0.00 45.53 3.16
242 243 2.096496 CGTCATTTGTGGCTCTCCAATC 59.904 50.000 0.00 0.00 45.53 2.67
243 244 2.424956 GTCATTTGTGGCTCTCCAATCC 59.575 50.000 0.00 0.00 45.53 3.01
244 245 2.309755 TCATTTGTGGCTCTCCAATCCT 59.690 45.455 0.00 0.00 45.53 3.24
245 246 2.496899 TTTGTGGCTCTCCAATCCTC 57.503 50.000 0.00 0.00 45.53 3.71
246 247 0.620556 TTGTGGCTCTCCAATCCTCC 59.379 55.000 0.00 0.00 45.53 4.30
247 248 0.252881 TGTGGCTCTCCAATCCTCCT 60.253 55.000 0.00 0.00 45.53 3.69
248 249 1.008327 TGTGGCTCTCCAATCCTCCTA 59.992 52.381 0.00 0.00 45.53 2.94
249 250 1.691434 GTGGCTCTCCAATCCTCCTAG 59.309 57.143 0.00 0.00 45.53 3.02
250 251 1.292242 TGGCTCTCCAATCCTCCTAGT 59.708 52.381 0.00 0.00 39.99 2.57
251 252 2.518407 TGGCTCTCCAATCCTCCTAGTA 59.482 50.000 0.00 0.00 39.99 1.82
252 253 3.052109 TGGCTCTCCAATCCTCCTAGTAA 60.052 47.826 0.00 0.00 39.99 2.24
253 254 3.322541 GGCTCTCCAATCCTCCTAGTAAC 59.677 52.174 0.00 0.00 0.00 2.50
254 255 3.322541 GCTCTCCAATCCTCCTAGTAACC 59.677 52.174 0.00 0.00 0.00 2.85
255 256 4.810345 CTCTCCAATCCTCCTAGTAACCT 58.190 47.826 0.00 0.00 0.00 3.50
256 257 5.212745 CTCTCCAATCCTCCTAGTAACCTT 58.787 45.833 0.00 0.00 0.00 3.50
257 258 5.600749 TCTCCAATCCTCCTAGTAACCTTT 58.399 41.667 0.00 0.00 0.00 3.11
258 259 5.425539 TCTCCAATCCTCCTAGTAACCTTTG 59.574 44.000 0.00 0.00 0.00 2.77
259 260 5.098663 TCCAATCCTCCTAGTAACCTTTGT 58.901 41.667 0.00 0.00 0.00 2.83
260 261 6.266080 TCCAATCCTCCTAGTAACCTTTGTA 58.734 40.000 0.00 0.00 0.00 2.41
261 262 6.906901 TCCAATCCTCCTAGTAACCTTTGTAT 59.093 38.462 0.00 0.00 0.00 2.29
262 263 7.070821 TCCAATCCTCCTAGTAACCTTTGTATC 59.929 40.741 0.00 0.00 0.00 2.24
263 264 6.997942 ATCCTCCTAGTAACCTTTGTATCC 57.002 41.667 0.00 0.00 0.00 2.59
264 265 5.214293 TCCTCCTAGTAACCTTTGTATCCC 58.786 45.833 0.00 0.00 0.00 3.85
265 266 4.966805 CCTCCTAGTAACCTTTGTATCCCA 59.033 45.833 0.00 0.00 0.00 4.37
266 267 5.163332 CCTCCTAGTAACCTTTGTATCCCAC 60.163 48.000 0.00 0.00 0.00 4.61
267 268 5.343715 TCCTAGTAACCTTTGTATCCCACA 58.656 41.667 0.00 0.00 34.51 4.17
268 269 5.786457 TCCTAGTAACCTTTGTATCCCACAA 59.214 40.000 0.00 0.00 45.49 3.33
278 279 5.941555 TTGTATCCCACAAACCTTGTTTT 57.058 34.783 0.00 0.00 44.20 2.43
279 280 5.269505 TGTATCCCACAAACCTTGTTTTG 57.730 39.130 0.00 0.00 43.23 2.44
280 281 4.956700 TGTATCCCACAAACCTTGTTTTGA 59.043 37.500 2.70 0.00 43.23 2.69
281 282 5.600484 TGTATCCCACAAACCTTGTTTTGAT 59.400 36.000 2.70 0.00 43.23 2.57
282 283 5.628797 ATCCCACAAACCTTGTTTTGATT 57.371 34.783 2.70 0.00 43.23 2.57
283 284 4.764172 TCCCACAAACCTTGTTTTGATTG 58.236 39.130 2.70 0.00 43.23 2.67
284 285 4.467795 TCCCACAAACCTTGTTTTGATTGA 59.532 37.500 2.70 0.00 43.23 2.57
285 286 5.046304 TCCCACAAACCTTGTTTTGATTGAA 60.046 36.000 2.70 0.00 43.23 2.69
286 287 5.821995 CCCACAAACCTTGTTTTGATTGAAT 59.178 36.000 2.70 0.00 43.23 2.57
287 288 6.318396 CCCACAAACCTTGTTTTGATTGAATT 59.682 34.615 2.70 0.00 43.23 2.17
288 289 7.497249 CCCACAAACCTTGTTTTGATTGAATTA 59.503 33.333 2.70 0.00 43.23 1.40
289 290 8.887717 CCACAAACCTTGTTTTGATTGAATTAA 58.112 29.630 2.70 0.00 43.23 1.40
294 295 7.850501 ACCTTGTTTTGATTGAATTAAAAGCG 58.149 30.769 7.93 1.36 29.87 4.68
295 296 7.494298 ACCTTGTTTTGATTGAATTAAAAGCGT 59.506 29.630 7.93 1.07 29.87 5.07
296 297 8.334632 CCTTGTTTTGATTGAATTAAAAGCGTT 58.665 29.630 7.93 0.00 29.87 4.84
297 298 9.146270 CTTGTTTTGATTGAATTAAAAGCGTTG 57.854 29.630 7.93 0.00 29.87 4.10
298 299 8.190888 TGTTTTGATTGAATTAAAAGCGTTGT 57.809 26.923 7.93 0.00 29.87 3.32
299 300 8.660373 TGTTTTGATTGAATTAAAAGCGTTGTT 58.340 25.926 7.93 0.00 29.87 2.83
300 301 9.484326 GTTTTGATTGAATTAAAAGCGTTGTTT 57.516 25.926 7.93 0.00 29.87 2.83
301 302 9.695884 TTTTGATTGAATTAAAAGCGTTGTTTC 57.304 25.926 4.04 0.00 0.00 2.78
302 303 7.088097 TGATTGAATTAAAAGCGTTGTTTCG 57.912 32.000 0.00 0.00 0.00 3.46
303 304 6.693545 TGATTGAATTAAAAGCGTTGTTTCGT 59.306 30.769 0.00 0.00 0.00 3.85
304 305 6.485253 TTGAATTAAAAGCGTTGTTTCGTC 57.515 33.333 0.00 0.00 0.00 4.20
305 306 5.812652 TGAATTAAAAGCGTTGTTTCGTCT 58.187 33.333 0.00 0.00 0.00 4.18
306 307 5.905181 TGAATTAAAAGCGTTGTTTCGTCTC 59.095 36.000 0.00 0.00 0.00 3.36
307 308 4.861389 TTAAAAGCGTTGTTTCGTCTCA 57.139 36.364 0.00 0.00 0.00 3.27
308 309 3.750639 AAAAGCGTTGTTTCGTCTCAA 57.249 38.095 0.00 0.00 0.00 3.02
309 310 3.750639 AAAGCGTTGTTTCGTCTCAAA 57.249 38.095 0.00 0.00 0.00 2.69
310 311 3.750639 AAGCGTTGTTTCGTCTCAAAA 57.249 38.095 0.00 0.00 0.00 2.44
311 312 3.750639 AGCGTTGTTTCGTCTCAAAAA 57.249 38.095 0.00 0.00 0.00 1.94
353 354 3.241784 ACGCGTGTGCAATTTTAGTTTTG 59.758 39.130 12.93 0.00 42.97 2.44
363 365 6.127196 TGCAATTTTAGTTTTGTCAGGGTTCT 60.127 34.615 0.00 0.00 0.00 3.01
387 2363 2.509569 TGCAATGATGTAAACACCGGT 58.490 42.857 0.00 0.00 0.00 5.28
463 2439 1.304464 GCCCTGGGGTTCAAGGAAG 60.304 63.158 16.03 0.00 37.65 3.46
464 2440 1.384191 CCCTGGGGTTCAAGGAAGG 59.616 63.158 4.27 0.00 0.00 3.46
468 2444 1.144913 CTGGGGTTCAAGGAAGGAACA 59.855 52.381 7.48 0.00 44.96 3.18
469 2445 1.571457 TGGGGTTCAAGGAAGGAACAA 59.429 47.619 7.48 0.00 44.96 2.83
562 2571 3.945064 AAACCCCCTCCTCCCTCCG 62.945 68.421 0.00 0.00 0.00 4.63
699 2709 1.140312 TAAGGATCATGGACCCCTGC 58.860 55.000 0.00 0.00 0.00 4.85
701 2711 2.081161 GGATCATGGACCCCTGCCT 61.081 63.158 0.00 0.00 0.00 4.75
709 2719 3.553095 GACCCCTGCCTTTGCTCGT 62.553 63.158 0.00 0.00 38.71 4.18
712 2722 2.109126 CCCTGCCTTTGCTCGTAGC 61.109 63.158 0.58 0.58 42.82 3.58
807 2817 4.098501 GGGTTCCATTTCCTGCATCTAAAG 59.901 45.833 0.00 0.00 0.00 1.85
833 2843 2.202743 TGCTTCCGAGATTCCGCG 60.203 61.111 0.00 0.00 35.33 6.46
843 2853 0.249911 AGATTCCGCGTCAATAGCCC 60.250 55.000 4.92 0.00 0.00 5.19
844 2854 0.249911 GATTCCGCGTCAATAGCCCT 60.250 55.000 4.92 0.00 0.00 5.19
856 2866 3.764434 TCAATAGCCCTCTCCTAATAGCG 59.236 47.826 0.00 0.00 0.00 4.26
875 2885 8.466086 AATAGCGGTTTGATTTGAGAAAATTC 57.534 30.769 0.00 0.00 0.00 2.17
1201 3211 6.311935 GCCGGCGAATTATCTAATTACATGTA 59.688 38.462 12.58 0.08 36.13 2.29
1204 3214 8.328146 CGGCGAATTATCTAATTACATGTATGG 58.672 37.037 6.36 0.00 36.13 2.74
1251 3261 1.677217 GCCACAGATGACCCAACTCTC 60.677 57.143 0.00 0.00 0.00 3.20
1282 3292 0.616395 TTCTGGCTATGGGGACGTCA 60.616 55.000 18.91 0.00 0.00 4.35
1295 3305 2.225727 GGGACGTCATTGAAGGTTGTTC 59.774 50.000 18.91 0.00 0.00 3.18
1304 3314 4.935352 TTGAAGGTTGTTCTCCCAATTG 57.065 40.909 0.00 0.00 0.00 2.32
1310 3320 1.993956 TGTTCTCCCAATTGGTGTGG 58.006 50.000 22.91 7.89 35.77 4.17
1412 3427 0.768221 AGTCTGGCAGGTCAAAGGGA 60.768 55.000 15.73 0.00 0.00 4.20
1492 3507 4.578105 GGATGGCAAGGTGATTTTAGAGAG 59.422 45.833 0.00 0.00 0.00 3.20
1529 3544 7.174772 TGTTATTGCGGATATGCTATGACATTT 59.825 33.333 0.00 0.00 39.95 2.32
1530 3545 6.579666 ATTGCGGATATGCTATGACATTTT 57.420 33.333 0.00 0.00 35.36 1.82
1539 3554 6.964807 ATGCTATGACATTTTCATGCCTAA 57.035 33.333 0.00 0.00 45.22 2.69
1544 3559 7.380602 GCTATGACATTTTCATGCCTAATGTTC 59.619 37.037 16.02 11.72 45.22 3.18
1546 3561 5.479724 TGACATTTTCATGCCTAATGTTCCA 59.520 36.000 16.02 10.52 41.24 3.53
1550 3565 7.178274 ACATTTTCATGCCTAATGTTCCACTTA 59.822 33.333 11.64 0.00 38.89 2.24
1559 3574 7.733047 TGCCTAATGTTCCACTTATATCCTCTA 59.267 37.037 0.00 0.00 0.00 2.43
1597 3612 1.970640 AGTCCCAAATTTCAGGTTGCC 59.029 47.619 4.15 0.00 0.00 4.52
1598 3613 1.001974 GTCCCAAATTTCAGGTTGCCC 59.998 52.381 4.15 0.00 0.00 5.36
1599 3614 1.132881 TCCCAAATTTCAGGTTGCCCT 60.133 47.619 4.15 0.00 44.02 5.19
1628 3645 4.499183 CTTTAGGAGTGTAGCTTGTCCTG 58.501 47.826 13.42 0.00 39.84 3.86
1650 3667 7.502226 TCCTGTTGTCTATTCATTGTTCTTGTT 59.498 33.333 0.00 0.00 0.00 2.83
1660 3677 3.608316 TTGTTCTTGTTTGCTGCCTTT 57.392 38.095 0.00 0.00 0.00 3.11
1661 3678 3.608316 TGTTCTTGTTTGCTGCCTTTT 57.392 38.095 0.00 0.00 0.00 2.27
1662 3679 3.936564 TGTTCTTGTTTGCTGCCTTTTT 58.063 36.364 0.00 0.00 0.00 1.94
1710 3727 5.590530 ACTGCCAAACTGTTTTATCAACA 57.409 34.783 2.41 0.00 0.00 3.33
1736 3753 9.825972 ACAATGATGCAATATAATTAGCGTTAC 57.174 29.630 0.00 0.00 0.00 2.50
1740 3757 9.267084 TGATGCAATATAATTAGCGTTACTTCA 57.733 29.630 0.00 0.00 0.00 3.02
1743 3760 9.877137 TGCAATATAATTAGCGTTACTTCATTG 57.123 29.630 9.88 9.88 0.00 2.82
1830 3847 5.039333 GCTCATCAATTTATGTTCTGCCAC 58.961 41.667 0.00 0.00 0.00 5.01
1846 3863 0.381801 CCACGGATAATGGCAAGCAC 59.618 55.000 0.00 0.00 0.00 4.40
1952 3976 5.633830 TCCAGATCTTTGACATTTTGAGC 57.366 39.130 0.00 0.00 0.00 4.26
1954 3978 5.048504 TCCAGATCTTTGACATTTTGAGCAC 60.049 40.000 0.00 0.00 0.00 4.40
2029 4053 5.505324 GCACTTGTTTCCTAGATGCATCATC 60.505 44.000 27.81 3.26 40.80 2.92
2058 4082 8.880750 AGATGTTAATAGATCGCATGATTCATG 58.119 33.333 20.14 20.14 43.91 3.07
2095 4119 3.011708 AGGGAATGCATGTTTAGGGAGTT 59.988 43.478 0.00 0.00 0.00 3.01
2205 4229 6.054295 AGGATATCTTGCTGAGCTGTAAAAG 58.946 40.000 5.83 0.04 0.00 2.27
2207 4231 6.238320 GGATATCTTGCTGAGCTGTAAAAGTG 60.238 42.308 5.83 0.00 0.00 3.16
2212 4236 2.739379 GCTGAGCTGTAAAAGTGACCTC 59.261 50.000 0.00 0.00 0.00 3.85
2220 4244 3.655777 TGTAAAAGTGACCTCCCCTGATT 59.344 43.478 0.00 0.00 0.00 2.57
2238 4265 5.447818 CCTGATTCTTGCGGAAATGTTCTAC 60.448 44.000 0.00 0.00 37.49 2.59
2243 4270 3.342377 TGCGGAAATGTTCTACCATCA 57.658 42.857 0.00 0.00 0.00 3.07
2300 4327 7.547227 AGTTGCACCATTTCTAAAATATGGAC 58.453 34.615 7.30 0.53 41.05 4.02
2384 4426 4.049186 CACGGACGAATGATAAAGGTAGG 58.951 47.826 0.00 0.00 0.00 3.18
2442 4484 4.504340 GGTGGATACGGCACTGGTAATTAT 60.504 45.833 0.00 0.00 42.51 1.28
2471 4513 3.365291 GATATGGCGGCGCGGGATA 62.365 63.158 26.95 20.49 0.00 2.59
2481 4523 2.426023 GCGGGATATGGAAGCGGT 59.574 61.111 0.00 0.00 0.00 5.68
2515 4557 0.186143 TGGCAATGGTGGTGGTTACA 59.814 50.000 0.00 0.00 0.00 2.41
2531 4573 3.431766 GGTTACAGAAGTGGCGGATATGT 60.432 47.826 0.00 0.00 0.00 2.29
2567 4612 1.668826 AGTGGTGGTGGTGGATATGT 58.331 50.000 0.00 0.00 0.00 2.29
2647 4692 2.833794 CGGGATATGGTGGTTACAGTG 58.166 52.381 0.00 0.00 0.00 3.66
2679 4724 1.063806 GCGGCGAGTATTCTAGCATG 58.936 55.000 12.98 0.00 42.61 4.06
2712 4757 4.489771 GCTGGTGGCTATGGCGGT 62.490 66.667 0.00 0.00 39.81 5.68
2756 4801 2.742372 CAACTCGGGCGGAAGTGG 60.742 66.667 0.00 0.00 0.00 4.00
2769 4814 1.838077 GGAAGTGGTGGTAGCTATGGT 59.162 52.381 0.00 0.00 0.00 3.55
2770 4815 3.036091 GGAAGTGGTGGTAGCTATGGTA 58.964 50.000 0.00 0.00 0.00 3.25
2778 4823 2.292653 TGGTAGCTATGGTAGTGGTGGT 60.293 50.000 0.00 0.00 0.00 4.16
2780 4825 1.204146 AGCTATGGTAGTGGTGGTGG 58.796 55.000 0.00 0.00 0.00 4.61
2796 4841 4.024048 GGTGGTGGAATCTACAATAATGCG 60.024 45.833 0.00 0.00 0.00 4.73
2815 4860 1.541233 CGAGCAACTCTGGTGGAAGTT 60.541 52.381 0.00 0.00 32.02 2.66
3989 6548 2.980233 ACTGGCCGTTTCAGCAGC 60.980 61.111 0.00 0.00 35.78 5.25
4014 6573 4.034258 CTGCTGTTGCTGGTGGCG 62.034 66.667 0.00 0.00 45.43 5.69
4049 6608 0.676782 GCGCTGGTGGGTACAATTCT 60.677 55.000 0.00 0.00 0.00 2.40
4060 6619 3.264964 GGGTACAATTCTCCCAACACCTA 59.735 47.826 0.00 0.00 40.79 3.08
4082 6641 1.147376 TGCCGGCAACTACAACAGT 59.853 52.632 30.74 0.00 40.05 3.55
4158 6717 4.034258 CTGCTGTTGCTGGTGGCG 62.034 66.667 0.00 0.00 45.43 5.69
4193 6752 0.739813 GCGCTCGTGGGTACAATTCT 60.740 55.000 0.00 0.00 0.00 2.40
4204 6763 3.264964 GGGTACAATTCTCCCAACACCTA 59.735 47.826 0.00 0.00 40.79 3.08
4208 6767 2.689983 CAATTCTCCCAACACCTATGGC 59.310 50.000 0.00 0.00 36.58 4.40
4226 6785 1.959226 CGCCGGCAACTACAACAGT 60.959 57.895 28.98 0.00 40.05 3.55
4272 6894 1.267806 ACTTTGCTGGAAATGTGAGCG 59.732 47.619 0.00 0.00 35.36 5.03
4481 7105 6.258230 TCTTGAGATGCAAAGGTAACAATG 57.742 37.500 0.00 0.00 35.74 2.82
4491 7115 5.625197 GCAAAGGTAACAATGATGAATGCCT 60.625 40.000 0.00 0.00 35.08 4.75
4541 7165 1.210538 AGCTTGATGATGCCTCTGGA 58.789 50.000 0.00 0.00 0.00 3.86
4553 7177 6.084738 TGATGCCTCTGGAGTAGGTTATTAT 58.915 40.000 0.00 0.00 36.43 1.28
4554 7178 6.558775 TGATGCCTCTGGAGTAGGTTATTATT 59.441 38.462 0.00 0.00 36.43 1.40
4555 7179 7.733047 TGATGCCTCTGGAGTAGGTTATTATTA 59.267 37.037 0.00 0.00 36.43 0.98
4556 7180 7.540474 TGCCTCTGGAGTAGGTTATTATTAG 57.460 40.000 0.00 0.00 36.43 1.73
4557 7181 6.497259 TGCCTCTGGAGTAGGTTATTATTAGG 59.503 42.308 0.00 0.00 36.43 2.69
4558 7182 6.497606 GCCTCTGGAGTAGGTTATTATTAGGT 59.502 42.308 0.00 0.00 36.43 3.08
4588 7212 5.912360 ATTGCTTAGTTTTTCTGCTTTGC 57.088 34.783 0.00 0.00 0.00 3.68
4608 7232 4.852609 GCTTTTGCATGCTATTTTGAGG 57.147 40.909 20.33 0.00 46.58 3.86
4637 7261 2.240667 AGTTATGGTGATGCTTCTGGCT 59.759 45.455 0.88 0.00 42.39 4.75
4708 7426 2.143122 CGTGTTGATTAGGCTGTGTGT 58.857 47.619 0.00 0.00 0.00 3.72
4766 7823 4.424061 TCATTGCTCAAAGTGAAATCCG 57.576 40.909 0.00 0.00 0.00 4.18
4892 7951 3.623060 CCATCGGTGTACATTTTCCTCAG 59.377 47.826 0.00 0.00 0.00 3.35
4913 7972 0.861837 CGGAGACACACAACTTCTGC 59.138 55.000 0.00 0.00 0.00 4.26
4914 7973 1.806247 CGGAGACACACAACTTCTGCA 60.806 52.381 0.00 0.00 0.00 4.41
4917 7976 0.308993 GACACACAACTTCTGCAGCC 59.691 55.000 9.47 0.00 0.00 4.85
4919 7978 0.956633 CACACAACTTCTGCAGCCAT 59.043 50.000 9.47 0.00 0.00 4.40
4920 7979 1.068748 CACACAACTTCTGCAGCCATC 60.069 52.381 9.47 0.00 0.00 3.51
4921 7980 1.241165 CACAACTTCTGCAGCCATCA 58.759 50.000 9.47 0.00 0.00 3.07
4924 7983 1.816835 CAACTTCTGCAGCCATCACAT 59.183 47.619 9.47 0.00 0.00 3.21
4970 8042 1.154054 GCCACGCGCATTCATTCAA 60.154 52.632 5.73 0.00 37.47 2.69
4984 8056 4.159377 TCATTCAACAACGCCATCTTTC 57.841 40.909 0.00 0.00 0.00 2.62
4986 8058 1.588674 TCAACAACGCCATCTTTCGT 58.411 45.000 0.00 0.00 41.06 3.85
4990 8062 0.165944 CAACGCCATCTTTCGTGTCC 59.834 55.000 0.00 0.00 39.06 4.02
5010 8082 1.881973 CTCACCACCACATTTCCAGTG 59.118 52.381 0.00 0.00 36.76 3.66
5031 8103 3.165071 GGAATGCCAAAGAGAAAAGGGA 58.835 45.455 0.00 0.00 0.00 4.20
5032 8104 3.194329 GGAATGCCAAAGAGAAAAGGGAG 59.806 47.826 0.00 0.00 0.00 4.30
5033 8105 1.620822 TGCCAAAGAGAAAAGGGAGC 58.379 50.000 0.00 0.00 0.00 4.70
5034 8106 1.133513 TGCCAAAGAGAAAAGGGAGCA 60.134 47.619 0.00 0.00 0.00 4.26
5035 8107 1.963515 GCCAAAGAGAAAAGGGAGCAA 59.036 47.619 0.00 0.00 0.00 3.91
5081 8153 1.300233 GGAATCGAGGTAGCTGCGG 60.300 63.158 0.00 0.00 0.00 5.69
5108 8188 4.416738 GCACTGGGCCTGGAGTCC 62.417 72.222 15.36 0.73 36.11 3.85
5156 8251 2.121948 CTGTTCATCTCCATCCTCCCA 58.878 52.381 0.00 0.00 0.00 4.37
5191 8339 1.377202 GCCGGAGAAGCACAATGGA 60.377 57.895 5.05 0.00 0.00 3.41
5194 8342 1.699656 CGGAGAAGCACAATGGAGCG 61.700 60.000 0.00 0.00 35.61 5.03
5229 8377 1.445095 GTCGCCTCCTGCATGATCT 59.555 57.895 0.00 0.00 41.33 2.75
5250 8398 4.779733 TCCTCCTGCTCGTCCCCC 62.780 72.222 0.00 0.00 0.00 5.40
5426 8574 2.507102 ACGTTCCGCGAGCAGATG 60.507 61.111 8.23 0.00 44.77 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.881118 TTGCGAAGTGCCAAATCCTC 59.119 50.000 0.00 0.00 45.60 3.71
1 2 0.883833 CTTGCGAAGTGCCAAATCCT 59.116 50.000 0.00 0.00 45.60 3.24
2 3 0.881118 TCTTGCGAAGTGCCAAATCC 59.119 50.000 0.00 0.00 45.60 3.01
3 4 2.478539 GGATCTTGCGAAGTGCCAAATC 60.479 50.000 0.00 0.00 45.60 2.17
4 5 1.474077 GGATCTTGCGAAGTGCCAAAT 59.526 47.619 0.00 0.00 45.60 2.32
5 6 0.881118 GGATCTTGCGAAGTGCCAAA 59.119 50.000 0.00 0.00 45.60 3.28
6 7 0.250684 TGGATCTTGCGAAGTGCCAA 60.251 50.000 0.00 0.00 45.60 4.52
7 8 0.035152 ATGGATCTTGCGAAGTGCCA 60.035 50.000 0.00 11.44 45.60 4.92
8 9 1.953559 TATGGATCTTGCGAAGTGCC 58.046 50.000 0.00 0.00 45.60 5.01
9 10 2.156504 CGATATGGATCTTGCGAAGTGC 59.843 50.000 0.00 0.00 46.70 4.40
10 11 2.156504 GCGATATGGATCTTGCGAAGTG 59.843 50.000 0.00 0.00 0.00 3.16
11 12 2.036475 AGCGATATGGATCTTGCGAAGT 59.964 45.455 0.00 0.00 0.00 3.01
12 13 2.681706 AGCGATATGGATCTTGCGAAG 58.318 47.619 0.00 0.00 0.00 3.79
13 14 2.820059 AGCGATATGGATCTTGCGAA 57.180 45.000 0.00 0.00 0.00 4.70
14 15 2.094700 GGTAGCGATATGGATCTTGCGA 60.095 50.000 0.00 0.00 0.00 5.10
15 16 2.263077 GGTAGCGATATGGATCTTGCG 58.737 52.381 0.00 0.00 0.00 4.85
16 17 2.094700 TCGGTAGCGATATGGATCTTGC 60.095 50.000 13.94 0.00 0.00 4.01
17 18 3.191581 AGTCGGTAGCGATATGGATCTTG 59.808 47.826 21.15 0.00 0.00 3.02
18 19 3.422796 AGTCGGTAGCGATATGGATCTT 58.577 45.455 21.15 0.00 0.00 2.40
19 20 3.074675 AGTCGGTAGCGATATGGATCT 57.925 47.619 21.15 7.90 0.00 2.75
20 21 4.817464 AGATAGTCGGTAGCGATATGGATC 59.183 45.833 21.15 16.58 0.00 3.36
21 22 4.576873 CAGATAGTCGGTAGCGATATGGAT 59.423 45.833 21.15 9.33 0.00 3.41
22 23 3.939592 CAGATAGTCGGTAGCGATATGGA 59.060 47.826 21.15 4.80 0.00 3.41
23 24 3.939592 TCAGATAGTCGGTAGCGATATGG 59.060 47.826 21.15 12.22 0.00 2.74
24 25 4.870991 TCTCAGATAGTCGGTAGCGATATG 59.129 45.833 21.15 12.10 0.00 1.78
25 26 5.087391 TCTCAGATAGTCGGTAGCGATAT 57.913 43.478 21.15 17.16 0.00 1.63
26 27 4.021280 ACTCTCAGATAGTCGGTAGCGATA 60.021 45.833 21.15 13.45 0.00 2.92
27 28 3.244284 ACTCTCAGATAGTCGGTAGCGAT 60.244 47.826 21.15 11.73 0.00 4.58
28 29 2.102757 ACTCTCAGATAGTCGGTAGCGA 59.897 50.000 13.94 13.94 0.00 4.93
29 30 2.477375 GACTCTCAGATAGTCGGTAGCG 59.523 54.545 8.29 8.29 34.50 4.26
30 31 3.468770 TGACTCTCAGATAGTCGGTAGC 58.531 50.000 10.53 0.00 45.19 3.58
31 32 6.224584 TGTATGACTCTCAGATAGTCGGTAG 58.775 44.000 10.53 0.00 45.19 3.18
32 33 6.170846 TGTATGACTCTCAGATAGTCGGTA 57.829 41.667 10.53 4.74 45.19 4.02
33 34 5.037383 TGTATGACTCTCAGATAGTCGGT 57.963 43.478 10.53 5.53 45.19 4.69
34 35 5.703130 TCATGTATGACTCTCAGATAGTCGG 59.297 44.000 10.53 0.00 45.19 4.79
35 36 6.620518 GCTCATGTATGACTCTCAGATAGTCG 60.621 46.154 10.53 0.00 45.19 4.18
36 37 6.430925 AGCTCATGTATGACTCTCAGATAGTC 59.569 42.308 8.69 8.69 43.04 2.59
37 38 6.306199 AGCTCATGTATGACTCTCAGATAGT 58.694 40.000 0.00 0.00 32.50 2.12
38 39 6.822667 AGCTCATGTATGACTCTCAGATAG 57.177 41.667 0.00 0.00 32.50 2.08
39 40 8.697507 TTAAGCTCATGTATGACTCTCAGATA 57.302 34.615 0.00 0.00 32.50 1.98
40 41 7.255906 CCTTAAGCTCATGTATGACTCTCAGAT 60.256 40.741 0.00 0.00 32.50 2.90
41 42 6.040278 CCTTAAGCTCATGTATGACTCTCAGA 59.960 42.308 0.00 0.00 32.50 3.27
42 43 6.040278 TCCTTAAGCTCATGTATGACTCTCAG 59.960 42.308 0.00 0.00 32.50 3.35
43 44 5.893824 TCCTTAAGCTCATGTATGACTCTCA 59.106 40.000 0.00 0.00 32.50 3.27
44 45 6.264292 TCTCCTTAAGCTCATGTATGACTCTC 59.736 42.308 0.00 0.00 32.50 3.20
45 46 6.040391 GTCTCCTTAAGCTCATGTATGACTCT 59.960 42.308 0.00 0.00 32.50 3.24
46 47 6.183360 TGTCTCCTTAAGCTCATGTATGACTC 60.183 42.308 0.00 0.00 32.50 3.36
47 48 5.658634 TGTCTCCTTAAGCTCATGTATGACT 59.341 40.000 0.00 0.00 32.50 3.41
48 49 5.907207 TGTCTCCTTAAGCTCATGTATGAC 58.093 41.667 0.00 0.00 32.50 3.06
49 50 5.893824 TCTGTCTCCTTAAGCTCATGTATGA 59.106 40.000 0.00 0.00 35.16 2.15
50 51 6.154203 TCTGTCTCCTTAAGCTCATGTATG 57.846 41.667 0.00 0.00 0.00 2.39
51 52 5.221422 GCTCTGTCTCCTTAAGCTCATGTAT 60.221 44.000 0.00 0.00 0.00 2.29
52 53 4.098654 GCTCTGTCTCCTTAAGCTCATGTA 59.901 45.833 0.00 0.00 0.00 2.29
53 54 3.118811 GCTCTGTCTCCTTAAGCTCATGT 60.119 47.826 0.00 0.00 0.00 3.21
54 55 3.118847 TGCTCTGTCTCCTTAAGCTCATG 60.119 47.826 0.00 0.00 34.11 3.07
55 56 3.102972 TGCTCTGTCTCCTTAAGCTCAT 58.897 45.455 0.00 0.00 34.11 2.90
56 57 2.495270 CTGCTCTGTCTCCTTAAGCTCA 59.505 50.000 0.00 0.00 34.11 4.26
57 58 2.495669 ACTGCTCTGTCTCCTTAAGCTC 59.504 50.000 0.00 0.00 34.11 4.09
58 59 2.233431 CACTGCTCTGTCTCCTTAAGCT 59.767 50.000 0.00 0.00 34.11 3.74
59 60 2.028567 ACACTGCTCTGTCTCCTTAAGC 60.029 50.000 0.00 0.00 0.00 3.09
60 61 3.583806 CACACTGCTCTGTCTCCTTAAG 58.416 50.000 0.00 0.00 0.00 1.85
61 62 2.300152 CCACACTGCTCTGTCTCCTTAA 59.700 50.000 0.00 0.00 0.00 1.85
62 63 1.895798 CCACACTGCTCTGTCTCCTTA 59.104 52.381 0.00 0.00 0.00 2.69
63 64 0.683973 CCACACTGCTCTGTCTCCTT 59.316 55.000 0.00 0.00 0.00 3.36
64 65 0.470833 ACCACACTGCTCTGTCTCCT 60.471 55.000 0.00 0.00 0.00 3.69
65 66 0.320247 CACCACACTGCTCTGTCTCC 60.320 60.000 0.00 0.00 0.00 3.71
66 67 0.676184 TCACCACACTGCTCTGTCTC 59.324 55.000 0.00 0.00 0.00 3.36
67 68 1.123077 TTCACCACACTGCTCTGTCT 58.877 50.000 0.00 0.00 0.00 3.41
68 69 2.175878 ATTCACCACACTGCTCTGTC 57.824 50.000 0.00 0.00 0.00 3.51
69 70 2.634940 AGTATTCACCACACTGCTCTGT 59.365 45.455 0.00 0.00 0.00 3.41
70 71 2.998670 CAGTATTCACCACACTGCTCTG 59.001 50.000 0.00 0.00 33.86 3.35
71 72 2.634940 ACAGTATTCACCACACTGCTCT 59.365 45.455 1.05 0.00 42.76 4.09
72 73 3.045601 ACAGTATTCACCACACTGCTC 57.954 47.619 1.05 0.00 42.76 4.26
73 74 4.222810 TCATACAGTATTCACCACACTGCT 59.777 41.667 1.05 0.00 42.76 4.24
74 75 4.503910 TCATACAGTATTCACCACACTGC 58.496 43.478 1.05 0.00 42.76 4.40
75 76 7.436376 CACTATCATACAGTATTCACCACACTG 59.564 40.741 0.00 0.00 44.20 3.66
76 77 7.342026 TCACTATCATACAGTATTCACCACACT 59.658 37.037 0.00 0.00 0.00 3.55
77 78 7.489160 TCACTATCATACAGTATTCACCACAC 58.511 38.462 0.00 0.00 0.00 3.82
78 79 7.654022 TCACTATCATACAGTATTCACCACA 57.346 36.000 0.00 0.00 0.00 4.17
79 80 7.653713 CCTTCACTATCATACAGTATTCACCAC 59.346 40.741 0.00 0.00 0.00 4.16
80 81 7.563556 TCCTTCACTATCATACAGTATTCACCA 59.436 37.037 0.00 0.00 0.00 4.17
81 82 7.952671 TCCTTCACTATCATACAGTATTCACC 58.047 38.462 0.00 0.00 0.00 4.02
82 83 8.851145 TCTCCTTCACTATCATACAGTATTCAC 58.149 37.037 0.00 0.00 0.00 3.18
83 84 8.996651 TCTCCTTCACTATCATACAGTATTCA 57.003 34.615 0.00 0.00 0.00 2.57
88 89 9.427821 AGTTAATCTCCTTCACTATCATACAGT 57.572 33.333 0.00 0.00 0.00 3.55
89 90 9.906660 GAGTTAATCTCCTTCACTATCATACAG 57.093 37.037 0.00 0.00 37.22 2.74
90 91 9.647918 AGAGTTAATCTCCTTCACTATCATACA 57.352 33.333 2.61 0.00 43.71 2.29
106 107 6.696441 AAACGGATCTACGAGAGTTAATCT 57.304 37.500 0.00 0.00 46.40 2.40
107 108 7.752557 AAAAACGGATCTACGAGAGTTAATC 57.247 36.000 0.00 0.00 46.40 1.75
135 136 0.240678 TCGTGGCACATTTCACATGC 59.759 50.000 19.09 0.00 44.52 4.06
136 137 1.730121 GCTCGTGGCACATTTCACATG 60.730 52.381 19.09 0.00 44.52 3.21
137 138 0.523072 GCTCGTGGCACATTTCACAT 59.477 50.000 19.09 0.00 44.52 3.21
138 139 1.948508 GCTCGTGGCACATTTCACA 59.051 52.632 19.09 0.00 44.52 3.58
139 140 4.847255 GCTCGTGGCACATTTCAC 57.153 55.556 19.09 0.00 44.52 3.18
150 151 3.382591 TACTCGCGCTCTGCTCGTG 62.383 63.158 5.56 2.63 43.27 4.35
151 152 3.125573 TACTCGCGCTCTGCTCGT 61.126 61.111 5.56 0.00 43.27 4.18
152 153 2.649349 GTACTCGCGCTCTGCTCG 60.649 66.667 5.56 0.00 43.27 5.03
153 154 0.526524 ATTGTACTCGCGCTCTGCTC 60.527 55.000 5.56 0.00 43.27 4.26
154 155 0.108615 AATTGTACTCGCGCTCTGCT 60.109 50.000 5.56 0.00 43.27 4.24
155 156 0.721718 AAATTGTACTCGCGCTCTGC 59.278 50.000 5.56 0.00 41.47 4.26
156 157 2.411748 TCAAAATTGTACTCGCGCTCTG 59.588 45.455 5.56 0.00 0.00 3.35
157 158 2.668457 CTCAAAATTGTACTCGCGCTCT 59.332 45.455 5.56 0.00 0.00 4.09
158 159 2.222819 CCTCAAAATTGTACTCGCGCTC 60.223 50.000 5.56 0.00 0.00 5.03
159 160 1.732259 CCTCAAAATTGTACTCGCGCT 59.268 47.619 5.56 0.00 0.00 5.92
160 161 1.790481 GCCTCAAAATTGTACTCGCGC 60.790 52.381 0.00 0.00 0.00 6.86
161 162 1.732259 AGCCTCAAAATTGTACTCGCG 59.268 47.619 0.00 0.00 0.00 5.87
162 163 2.742053 TGAGCCTCAAAATTGTACTCGC 59.258 45.455 0.00 0.00 0.00 5.03
163 164 5.812642 AGTATGAGCCTCAAAATTGTACTCG 59.187 40.000 0.00 0.00 0.00 4.18
164 165 8.894768 ATAGTATGAGCCTCAAAATTGTACTC 57.105 34.615 0.00 0.74 0.00 2.59
165 166 9.113838 CAATAGTATGAGCCTCAAAATTGTACT 57.886 33.333 0.00 3.63 0.00 2.73
166 167 7.857885 GCAATAGTATGAGCCTCAAAATTGTAC 59.142 37.037 16.33 7.70 0.00 2.90
167 168 7.775093 AGCAATAGTATGAGCCTCAAAATTGTA 59.225 33.333 16.33 0.00 0.00 2.41
168 169 6.604795 AGCAATAGTATGAGCCTCAAAATTGT 59.395 34.615 16.33 0.00 0.00 2.71
169 170 7.035840 AGCAATAGTATGAGCCTCAAAATTG 57.964 36.000 0.00 7.73 0.00 2.32
170 171 8.752005 TTAGCAATAGTATGAGCCTCAAAATT 57.248 30.769 0.00 0.00 0.00 1.82
171 172 8.213679 TCTTAGCAATAGTATGAGCCTCAAAAT 58.786 33.333 0.00 0.00 0.00 1.82
172 173 7.564793 TCTTAGCAATAGTATGAGCCTCAAAA 58.435 34.615 0.00 0.00 0.00 2.44
173 174 7.124573 TCTTAGCAATAGTATGAGCCTCAAA 57.875 36.000 0.00 0.00 0.00 2.69
174 175 6.731292 TCTTAGCAATAGTATGAGCCTCAA 57.269 37.500 0.00 0.00 0.00 3.02
175 176 6.295518 CCATCTTAGCAATAGTATGAGCCTCA 60.296 42.308 0.00 0.00 0.00 3.86
176 177 6.105333 CCATCTTAGCAATAGTATGAGCCTC 58.895 44.000 4.66 0.00 0.00 4.70
177 178 5.570439 GCCATCTTAGCAATAGTATGAGCCT 60.570 44.000 4.66 0.00 0.00 4.58
178 179 4.633565 GCCATCTTAGCAATAGTATGAGCC 59.366 45.833 4.66 0.00 0.00 4.70
179 180 5.350914 CAGCCATCTTAGCAATAGTATGAGC 59.649 44.000 0.70 0.70 0.00 4.26
180 181 5.350914 GCAGCCATCTTAGCAATAGTATGAG 59.649 44.000 0.00 0.00 0.00 2.90
181 182 5.012458 AGCAGCCATCTTAGCAATAGTATGA 59.988 40.000 0.00 0.00 0.00 2.15
182 183 5.243981 AGCAGCCATCTTAGCAATAGTATG 58.756 41.667 0.00 0.00 0.00 2.39
183 184 5.495926 AGCAGCCATCTTAGCAATAGTAT 57.504 39.130 0.00 0.00 0.00 2.12
184 185 4.963318 AGCAGCCATCTTAGCAATAGTA 57.037 40.909 0.00 0.00 0.00 1.82
185 186 3.853355 AGCAGCCATCTTAGCAATAGT 57.147 42.857 0.00 0.00 0.00 2.12
186 187 3.683822 GCTAGCAGCCATCTTAGCAATAG 59.316 47.826 10.63 0.00 34.48 1.73
187 188 3.326006 AGCTAGCAGCCATCTTAGCAATA 59.674 43.478 18.83 0.00 43.77 1.90
188 189 2.106166 AGCTAGCAGCCATCTTAGCAAT 59.894 45.455 18.83 0.00 43.77 3.56
189 190 1.487976 AGCTAGCAGCCATCTTAGCAA 59.512 47.619 18.83 0.00 43.77 3.91
190 191 1.126488 AGCTAGCAGCCATCTTAGCA 58.874 50.000 18.83 0.00 43.77 3.49
191 192 1.872313 CAAGCTAGCAGCCATCTTAGC 59.128 52.381 18.83 2.98 43.77 3.09
192 193 2.103771 TCCAAGCTAGCAGCCATCTTAG 59.896 50.000 18.83 0.00 43.77 2.18
193 194 2.118679 TCCAAGCTAGCAGCCATCTTA 58.881 47.619 18.83 0.00 43.77 2.10
194 195 0.914644 TCCAAGCTAGCAGCCATCTT 59.085 50.000 18.83 0.00 43.77 2.40
195 196 1.138568 ATCCAAGCTAGCAGCCATCT 58.861 50.000 18.83 0.00 43.77 2.90
196 197 1.236628 CATCCAAGCTAGCAGCCATC 58.763 55.000 18.83 0.00 43.77 3.51
197 198 0.549950 ACATCCAAGCTAGCAGCCAT 59.450 50.000 18.83 0.19 43.77 4.40
198 199 0.393402 CACATCCAAGCTAGCAGCCA 60.393 55.000 18.83 0.00 43.77 4.75
199 200 1.099879 CCACATCCAAGCTAGCAGCC 61.100 60.000 18.83 0.00 43.77 4.85
200 201 1.099879 CCCACATCCAAGCTAGCAGC 61.100 60.000 18.83 0.00 42.84 5.25
201 202 0.543277 TCCCACATCCAAGCTAGCAG 59.457 55.000 18.83 8.92 0.00 4.24
202 203 0.253044 GTCCCACATCCAAGCTAGCA 59.747 55.000 18.83 0.00 0.00 3.49
203 204 0.811616 CGTCCCACATCCAAGCTAGC 60.812 60.000 6.62 6.62 0.00 3.42
204 205 0.537188 ACGTCCCACATCCAAGCTAG 59.463 55.000 0.00 0.00 0.00 3.42
205 206 0.535335 GACGTCCCACATCCAAGCTA 59.465 55.000 3.51 0.00 0.00 3.32
206 207 1.296715 GACGTCCCACATCCAAGCT 59.703 57.895 3.51 0.00 0.00 3.74
207 208 0.392998 ATGACGTCCCACATCCAAGC 60.393 55.000 14.12 0.00 0.00 4.01
208 209 2.113860 AATGACGTCCCACATCCAAG 57.886 50.000 14.12 0.00 0.00 3.61
209 210 2.158559 CAAATGACGTCCCACATCCAA 58.841 47.619 14.12 0.00 0.00 3.53
210 211 1.073125 ACAAATGACGTCCCACATCCA 59.927 47.619 14.12 0.00 0.00 3.41
211 212 1.468520 CACAAATGACGTCCCACATCC 59.531 52.381 14.12 0.00 0.00 3.51
212 213 1.468520 CCACAAATGACGTCCCACATC 59.531 52.381 14.12 0.00 0.00 3.06
213 214 1.533625 CCACAAATGACGTCCCACAT 58.466 50.000 14.12 0.00 0.00 3.21
214 215 1.169661 GCCACAAATGACGTCCCACA 61.170 55.000 14.12 0.00 0.00 4.17
215 216 0.889186 AGCCACAAATGACGTCCCAC 60.889 55.000 14.12 0.00 0.00 4.61
216 217 0.605319 GAGCCACAAATGACGTCCCA 60.605 55.000 14.12 0.00 0.00 4.37
217 218 0.321653 AGAGCCACAAATGACGTCCC 60.322 55.000 14.12 0.00 0.00 4.46
218 219 1.079503 GAGAGCCACAAATGACGTCC 58.920 55.000 14.12 0.00 0.00 4.79
219 220 1.079503 GGAGAGCCACAAATGACGTC 58.920 55.000 9.11 9.11 0.00 4.34
220 221 0.396435 TGGAGAGCCACAAATGACGT 59.604 50.000 0.00 0.00 39.92 4.34
221 222 1.522668 TTGGAGAGCCACAAATGACG 58.477 50.000 0.00 0.00 45.94 4.35
222 223 2.424956 GGATTGGAGAGCCACAAATGAC 59.575 50.000 0.00 0.00 45.94 3.06
223 224 2.309755 AGGATTGGAGAGCCACAAATGA 59.690 45.455 0.00 0.00 45.94 2.57
224 225 2.686915 GAGGATTGGAGAGCCACAAATG 59.313 50.000 0.00 0.00 45.94 2.32
225 226 2.357569 GGAGGATTGGAGAGCCACAAAT 60.358 50.000 0.00 0.00 45.94 2.32
226 227 1.004745 GGAGGATTGGAGAGCCACAAA 59.995 52.381 0.00 0.00 45.94 2.83
227 228 0.620556 GGAGGATTGGAGAGCCACAA 59.379 55.000 0.00 0.00 45.94 3.33
228 229 0.252881 AGGAGGATTGGAGAGCCACA 60.253 55.000 0.00 0.00 45.94 4.17
229 230 1.691434 CTAGGAGGATTGGAGAGCCAC 59.309 57.143 0.00 0.00 45.94 5.01
230 231 1.292242 ACTAGGAGGATTGGAGAGCCA 59.708 52.381 0.00 0.00 44.17 4.75
231 232 2.095604 ACTAGGAGGATTGGAGAGCC 57.904 55.000 0.00 0.00 0.00 4.70
232 233 3.322541 GGTTACTAGGAGGATTGGAGAGC 59.677 52.174 0.00 0.00 0.00 4.09
233 234 4.810345 AGGTTACTAGGAGGATTGGAGAG 58.190 47.826 0.00 0.00 0.00 3.20
234 235 4.901785 AGGTTACTAGGAGGATTGGAGA 57.098 45.455 0.00 0.00 0.00 3.71
235 236 5.189934 ACAAAGGTTACTAGGAGGATTGGAG 59.810 44.000 0.00 0.00 0.00 3.86
236 237 5.098663 ACAAAGGTTACTAGGAGGATTGGA 58.901 41.667 0.00 0.00 0.00 3.53
237 238 5.437191 ACAAAGGTTACTAGGAGGATTGG 57.563 43.478 0.00 0.00 0.00 3.16
238 239 7.217906 GGATACAAAGGTTACTAGGAGGATTG 58.782 42.308 0.00 0.00 0.00 2.67
239 240 6.329460 GGGATACAAAGGTTACTAGGAGGATT 59.671 42.308 0.00 0.00 39.74 3.01
240 241 5.845065 GGGATACAAAGGTTACTAGGAGGAT 59.155 44.000 0.00 0.00 39.74 3.24
241 242 5.214293 GGGATACAAAGGTTACTAGGAGGA 58.786 45.833 0.00 0.00 39.74 3.71
242 243 4.966805 TGGGATACAAAGGTTACTAGGAGG 59.033 45.833 0.00 0.00 39.74 4.30
243 244 5.424252 TGTGGGATACAAAGGTTACTAGGAG 59.576 44.000 0.00 0.00 36.06 3.69
244 245 5.343715 TGTGGGATACAAAGGTTACTAGGA 58.656 41.667 0.00 0.00 36.06 2.94
245 246 5.687166 TGTGGGATACAAAGGTTACTAGG 57.313 43.478 0.00 0.00 36.06 3.02
257 258 4.956700 TCAAAACAAGGTTTGTGGGATACA 59.043 37.500 10.10 0.00 44.59 2.29
258 259 5.523438 TCAAAACAAGGTTTGTGGGATAC 57.477 39.130 10.10 0.00 44.59 2.24
259 260 6.325028 TCAATCAAAACAAGGTTTGTGGGATA 59.675 34.615 10.10 0.00 44.59 2.59
260 261 5.130145 TCAATCAAAACAAGGTTTGTGGGAT 59.870 36.000 10.10 0.00 44.59 3.85
261 262 4.467795 TCAATCAAAACAAGGTTTGTGGGA 59.532 37.500 10.10 4.23 44.59 4.37
262 263 4.764172 TCAATCAAAACAAGGTTTGTGGG 58.236 39.130 10.10 2.21 44.59 4.61
263 264 6.923928 ATTCAATCAAAACAAGGTTTGTGG 57.076 33.333 10.10 2.51 44.59 4.17
268 269 8.334632 CGCTTTTAATTCAATCAAAACAAGGTT 58.665 29.630 0.00 0.00 0.00 3.50
269 270 7.494298 ACGCTTTTAATTCAATCAAAACAAGGT 59.506 29.630 0.00 0.00 0.00 3.50
270 271 7.850501 ACGCTTTTAATTCAATCAAAACAAGG 58.149 30.769 0.00 0.00 0.00 3.61
271 272 9.146270 CAACGCTTTTAATTCAATCAAAACAAG 57.854 29.630 0.00 0.00 0.00 3.16
272 273 8.660373 ACAACGCTTTTAATTCAATCAAAACAA 58.340 25.926 0.00 0.00 0.00 2.83
273 274 8.190888 ACAACGCTTTTAATTCAATCAAAACA 57.809 26.923 0.00 0.00 0.00 2.83
274 275 9.484326 AAACAACGCTTTTAATTCAATCAAAAC 57.516 25.926 0.00 0.00 0.00 2.43
275 276 9.695884 GAAACAACGCTTTTAATTCAATCAAAA 57.304 25.926 0.00 0.00 0.00 2.44
276 277 8.053072 CGAAACAACGCTTTTAATTCAATCAAA 58.947 29.630 0.00 0.00 0.00 2.69
277 278 7.221067 ACGAAACAACGCTTTTAATTCAATCAA 59.779 29.630 0.00 0.00 36.70 2.57
278 279 6.693545 ACGAAACAACGCTTTTAATTCAATCA 59.306 30.769 0.00 0.00 36.70 2.57
279 280 7.089249 ACGAAACAACGCTTTTAATTCAATC 57.911 32.000 0.00 0.00 36.70 2.67
280 281 6.915843 AGACGAAACAACGCTTTTAATTCAAT 59.084 30.769 0.00 0.00 36.70 2.57
281 282 6.259638 AGACGAAACAACGCTTTTAATTCAA 58.740 32.000 0.00 0.00 36.70 2.69
282 283 5.812652 AGACGAAACAACGCTTTTAATTCA 58.187 33.333 0.00 0.00 36.70 2.57
283 284 5.905181 TGAGACGAAACAACGCTTTTAATTC 59.095 36.000 0.00 0.00 36.70 2.17
284 285 5.812652 TGAGACGAAACAACGCTTTTAATT 58.187 33.333 0.00 0.00 36.70 1.40
285 286 5.412526 TGAGACGAAACAACGCTTTTAAT 57.587 34.783 0.00 0.00 36.70 1.40
286 287 4.861389 TGAGACGAAACAACGCTTTTAA 57.139 36.364 0.00 0.00 36.70 1.52
287 288 4.861389 TTGAGACGAAACAACGCTTTTA 57.139 36.364 0.00 0.00 36.70 1.52
288 289 3.750639 TTGAGACGAAACAACGCTTTT 57.249 38.095 0.00 0.00 36.70 2.27
289 290 3.750639 TTTGAGACGAAACAACGCTTT 57.249 38.095 0.00 0.00 36.70 3.51
290 291 3.750639 TTTTGAGACGAAACAACGCTT 57.249 38.095 0.00 0.00 36.70 4.68
291 292 3.750639 TTTTTGAGACGAAACAACGCT 57.249 38.095 0.00 0.00 36.70 5.07
311 312 3.426159 CGTCCGCTCTTATGCACATTTTT 60.426 43.478 0.00 0.00 0.00 1.94
312 313 2.095853 CGTCCGCTCTTATGCACATTTT 59.904 45.455 0.00 0.00 0.00 1.82
313 314 1.665679 CGTCCGCTCTTATGCACATTT 59.334 47.619 0.00 0.00 0.00 2.32
314 315 1.290203 CGTCCGCTCTTATGCACATT 58.710 50.000 0.00 0.00 0.00 2.71
315 316 1.154205 GCGTCCGCTCTTATGCACAT 61.154 55.000 4.10 0.00 38.26 3.21
353 354 3.149196 TCATTGCAAAGAGAACCCTGAC 58.851 45.455 1.71 0.00 0.00 3.51
363 365 4.320861 CCGGTGTTTACATCATTGCAAAGA 60.321 41.667 6.86 6.86 0.00 2.52
407 2383 7.424227 TTTATTTTTCAAGAAATGGCAGCAG 57.576 32.000 0.00 0.00 31.96 4.24
408 2384 7.798596 TTTTATTTTTCAAGAAATGGCAGCA 57.201 28.000 0.00 0.00 31.96 4.41
409 2385 9.333497 GATTTTTATTTTTCAAGAAATGGCAGC 57.667 29.630 0.00 0.00 31.96 5.25
443 2419 4.740822 CCTTGAACCCCAGGGCCG 62.741 72.222 0.00 0.00 35.10 6.13
463 2439 1.680860 CCTATCGGTGGGGTTTGTTCC 60.681 57.143 0.00 0.00 0.00 3.62
464 2440 1.680860 CCCTATCGGTGGGGTTTGTTC 60.681 57.143 9.43 0.00 41.12 3.18
568 2577 1.376609 CGTAGCAGGGGTGATTTGGC 61.377 60.000 0.00 0.00 0.00 4.52
807 2817 1.922570 TCTCGGAAGCACTAATTCGC 58.077 50.000 0.00 0.00 0.00 4.70
833 2843 4.381079 CGCTATTAGGAGAGGGCTATTGAC 60.381 50.000 0.00 0.00 0.00 3.18
843 2853 6.049149 TCAAATCAAACCGCTATTAGGAGAG 58.951 40.000 0.00 0.00 0.00 3.20
844 2854 5.984725 TCAAATCAAACCGCTATTAGGAGA 58.015 37.500 0.00 0.00 0.00 3.71
856 2866 4.929211 CCCCGAATTTTCTCAAATCAAACC 59.071 41.667 0.00 0.00 30.80 3.27
875 2885 2.499685 GATCCAGTCGAACCCCCG 59.500 66.667 0.00 0.00 0.00 5.73
954 2964 1.801178 CGGGCACTGAAGAAGAAGAAC 59.199 52.381 0.00 0.00 36.31 3.01
1044 3054 4.396854 GACGAATTCGAGGACCCG 57.603 61.111 33.05 6.10 43.02 5.28
1164 3174 1.803334 TCGCCGGCATCAATAATACC 58.197 50.000 28.98 0.00 0.00 2.73
1165 3175 4.419522 AATTCGCCGGCATCAATAATAC 57.580 40.909 28.98 0.00 0.00 1.89
1282 3292 4.284234 CCAATTGGGAGAACAACCTTCAAT 59.716 41.667 17.36 0.00 40.01 2.57
1295 3305 0.827089 TGTGCCACACCAATTGGGAG 60.827 55.000 27.89 21.09 41.15 4.30
1304 3314 5.772825 ATATACATCAAATGTGCCACACC 57.227 39.130 0.00 0.00 44.60 4.16
1310 3320 7.536895 TGGCAAAAATATACATCAAATGTGC 57.463 32.000 2.88 0.00 44.60 4.57
1358 3373 2.691409 TTCTAGCTGAACCCAATCCG 57.309 50.000 0.00 0.00 0.00 4.18
1412 3427 7.981225 GTGGATGCATAAGTAACAAATCCAAAT 59.019 33.333 0.00 0.00 42.65 2.32
1492 3507 2.132762 CGCAATAACACGTAGGGGATC 58.867 52.381 0.00 0.00 0.00 3.36
1529 3544 7.665559 GGATATAAGTGGAACATTAGGCATGAA 59.334 37.037 0.00 0.00 44.52 2.57
1530 3545 7.017551 AGGATATAAGTGGAACATTAGGCATGA 59.982 37.037 0.00 0.00 44.52 3.07
1539 3554 6.844388 TGGTGTAGAGGATATAAGTGGAACAT 59.156 38.462 0.00 0.00 44.52 2.71
1544 3559 6.732896 AAGTGGTGTAGAGGATATAAGTGG 57.267 41.667 0.00 0.00 0.00 4.00
1546 3561 6.156256 TGCAAAGTGGTGTAGAGGATATAAGT 59.844 38.462 0.00 0.00 0.00 2.24
1550 3565 5.435686 TTGCAAAGTGGTGTAGAGGATAT 57.564 39.130 0.00 0.00 0.00 1.63
1559 3574 4.705023 GGGACTATATTTGCAAAGTGGTGT 59.295 41.667 18.19 11.78 0.00 4.16
1609 3626 3.170991 ACAGGACAAGCTACACTCCTA 57.829 47.619 0.00 0.00 31.53 2.94
1614 3631 3.113260 AGACAACAGGACAAGCTACAC 57.887 47.619 0.00 0.00 0.00 2.90
1615 3632 5.011635 TGAATAGACAACAGGACAAGCTACA 59.988 40.000 0.00 0.00 0.00 2.74
1628 3645 7.649306 AGCAAACAAGAACAATGAATAGACAAC 59.351 33.333 0.00 0.00 0.00 3.32
1710 3727 9.825972 GTAACGCTAATTATATTGCATCATTGT 57.174 29.630 0.00 0.00 0.00 2.71
1736 3753 8.019669 CCACTTTAGATCAAGACAACAATGAAG 58.980 37.037 0.00 0.00 0.00 3.02
1737 3754 7.719193 TCCACTTTAGATCAAGACAACAATGAA 59.281 33.333 0.00 0.00 0.00 2.57
1738 3755 7.223584 TCCACTTTAGATCAAGACAACAATGA 58.776 34.615 0.00 0.00 0.00 2.57
1739 3756 7.388776 TCTCCACTTTAGATCAAGACAACAATG 59.611 37.037 0.00 0.00 0.00 2.82
1740 3757 7.453393 TCTCCACTTTAGATCAAGACAACAAT 58.547 34.615 0.00 0.00 0.00 2.71
1741 3758 6.826668 TCTCCACTTTAGATCAAGACAACAA 58.173 36.000 0.00 0.00 0.00 2.83
1742 3759 6.419484 TCTCCACTTTAGATCAAGACAACA 57.581 37.500 0.00 0.00 0.00 3.33
1743 3760 6.876257 ACATCTCCACTTTAGATCAAGACAAC 59.124 38.462 0.00 0.00 31.22 3.32
1830 3847 1.334869 GAAGGTGCTTGCCATTATCCG 59.665 52.381 0.00 0.00 0.00 4.18
1846 3863 2.041755 ACTAAGGCAGGAAAAGGGAAGG 59.958 50.000 0.00 0.00 0.00 3.46
1952 3976 8.871862 CAACAATGGATTAACAACAATATGGTG 58.128 33.333 0.00 0.00 41.80 4.17
1982 4006 4.261572 CCAACAGCTTCGGATTCTTTGAAA 60.262 41.667 0.00 0.00 0.00 2.69
1986 4010 1.541588 GCCAACAGCTTCGGATTCTTT 59.458 47.619 0.00 0.00 38.99 2.52
2029 4053 5.482006 TCATGCGATCTATTAACATCTGGG 58.518 41.667 0.00 0.00 0.00 4.45
2058 4082 2.859165 TCCCTGGTGTTCATCAGTTC 57.141 50.000 11.40 0.00 0.00 3.01
2095 4119 4.766373 TGCCAAAATTGAGAATAGTCTGCA 59.234 37.500 0.00 0.00 32.80 4.41
2205 4229 1.680249 GCAAGAATCAGGGGAGGTCAC 60.680 57.143 0.00 0.00 0.00 3.67
2207 4231 0.462759 CGCAAGAATCAGGGGAGGTC 60.463 60.000 0.00 0.00 43.02 3.85
2212 4236 1.406539 CATTTCCGCAAGAATCAGGGG 59.593 52.381 3.10 3.10 43.02 4.79
2220 4244 3.410631 TGGTAGAACATTTCCGCAAGA 57.589 42.857 0.00 0.00 43.02 3.02
2238 4265 3.091633 ACAATCCCCAAGTTCTGATGG 57.908 47.619 0.00 0.00 36.42 3.51
2243 4270 3.321968 GCAGAAAACAATCCCCAAGTTCT 59.678 43.478 0.00 0.00 0.00 3.01
2442 4484 1.148273 GCCATATCCGCCACTTCCA 59.852 57.895 0.00 0.00 0.00 3.53
2481 4523 2.510411 CCAGCATATCCACCGCCA 59.490 61.111 0.00 0.00 0.00 5.69
2515 4557 1.202580 GCTGACATATCCGCCACTTCT 60.203 52.381 0.00 0.00 0.00 2.85
2531 4573 1.138859 CACTTCCATATCCCGTGCTGA 59.861 52.381 0.00 0.00 0.00 4.26
2658 4703 1.729838 GCTAGAATACTCGCCGCCG 60.730 63.158 0.00 0.00 0.00 6.46
2712 4757 3.965379 TTATTGTAGCTTCCGTCACCA 57.035 42.857 0.00 0.00 0.00 4.17
2756 4801 2.102588 CCACCACTACCATAGCTACCAC 59.897 54.545 0.00 0.00 0.00 4.16
2769 4814 6.877668 TTATTGTAGATTCCACCACCACTA 57.122 37.500 0.00 0.00 0.00 2.74
2770 4815 5.772393 TTATTGTAGATTCCACCACCACT 57.228 39.130 0.00 0.00 0.00 4.00
2778 4823 4.702831 TGCTCGCATTATTGTAGATTCCA 58.297 39.130 0.00 0.00 0.00 3.53
2780 4825 6.201806 AGAGTTGCTCGCATTATTGTAGATTC 59.798 38.462 0.00 0.00 35.36 2.52
2796 4841 2.147150 GAACTTCCACCAGAGTTGCTC 58.853 52.381 0.00 0.00 0.00 4.26
2815 4860 4.175337 GCCGCCATAGCCACCAGA 62.175 66.667 0.00 0.00 34.57 3.86
2833 4878 2.032680 TTATTGTAGCTTCCGCCACC 57.967 50.000 0.00 0.00 36.60 4.61
3966 6443 0.040067 CTGAAACGGCCAGTGCTTTC 60.040 55.000 2.24 3.86 37.74 2.62
3968 6445 2.555547 GCTGAAACGGCCAGTGCTT 61.556 57.895 2.24 0.00 37.74 3.91
3969 6446 2.980233 GCTGAAACGGCCAGTGCT 60.980 61.111 2.24 0.00 37.74 4.40
3972 6449 2.980233 GCTGCTGAAACGGCCAGT 60.980 61.111 2.24 0.00 35.83 4.00
3973 6450 4.093952 CGCTGCTGAAACGGCCAG 62.094 66.667 2.24 0.00 38.81 4.85
3977 6454 1.586154 AATTCCCGCTGCTGAAACGG 61.586 55.000 0.00 0.00 46.50 4.44
3978 6455 0.179189 GAATTCCCGCTGCTGAAACG 60.179 55.000 0.00 0.00 0.00 3.60
3989 6548 0.169672 CAGCAACAGCAGAATTCCCG 59.830 55.000 0.65 0.00 0.00 5.14
4014 6573 2.248431 GCTGTTGACGCCGTTGTC 59.752 61.111 0.00 0.00 39.37 3.18
4024 6583 2.512355 TACCCACCAGCGCTGTTGA 61.512 57.895 33.39 13.40 0.00 3.18
4026 6585 2.032071 GTACCCACCAGCGCTGTT 59.968 61.111 33.75 20.33 0.00 3.16
4060 6619 1.074072 TTGTAGTTGCCGGCACCAT 59.926 52.632 32.95 20.44 0.00 3.55
4067 6626 1.148310 CTCCACTGTTGTAGTTGCCG 58.852 55.000 0.00 0.00 37.60 5.69
4070 6629 2.146342 CCAGCTCCACTGTTGTAGTTG 58.854 52.381 0.00 0.00 45.68 3.16
4102 6661 1.286880 CCAGTGCTTTCGCCAAAGG 59.713 57.895 5.94 0.00 39.69 3.11
4111 6670 2.032981 CTGAAACGGCCAGTGCTTT 58.967 52.632 2.24 0.00 37.74 3.51
4122 6681 0.179189 GAATTCCCGCTGCTGAAACG 60.179 55.000 0.00 0.00 0.00 3.60
4137 6696 0.963962 CCACCAGCAACAGCAGAATT 59.036 50.000 0.00 0.00 0.00 2.17
4158 6717 2.248431 GCTGTTGACGCCGTTGTC 59.752 61.111 0.00 0.00 39.37 3.18
4168 6727 2.566570 TACCCACGAGCGCTGTTGA 61.567 57.895 18.48 0.00 0.00 3.18
4170 6729 2.048503 GTACCCACGAGCGCTGTT 60.049 61.111 18.48 0.00 0.00 3.16
4193 6752 2.270850 GCGCCATAGGTGTTGGGA 59.729 61.111 0.00 0.00 35.34 4.37
4204 6763 3.910914 TTGTAGTTGCCGGCGCCAT 62.911 57.895 28.98 10.32 0.00 4.40
4208 6767 1.959226 ACTGTTGTAGTTGCCGGCG 60.959 57.895 23.90 5.43 35.67 6.46
4214 6773 2.146342 CCAGCTCCACTGTTGTAGTTG 58.854 52.381 0.00 0.00 45.68 3.16
4226 6785 1.827789 GTTGTTGCCACCAGCTCCA 60.828 57.895 0.00 0.00 44.23 3.86
4272 6894 0.451783 CCAGTAAAGTTGCCGATGCC 59.548 55.000 0.00 0.00 36.33 4.40
4481 7105 2.124151 ACCCGCCAGGCATTCATC 60.124 61.111 13.30 0.00 40.58 2.92
4491 7115 0.671251 CTAACAAAAAGCACCCGCCA 59.329 50.000 0.00 0.00 39.83 5.69
4555 7179 9.355916 AGAAAAACTAAGCAATTCTTCTTACCT 57.644 29.630 0.00 0.00 36.25 3.08
4556 7180 9.399403 CAGAAAAACTAAGCAATTCTTCTTACC 57.601 33.333 0.00 0.00 36.25 2.85
4557 7181 8.906693 GCAGAAAAACTAAGCAATTCTTCTTAC 58.093 33.333 0.00 0.00 36.25 2.34
4558 7182 8.850156 AGCAGAAAAACTAAGCAATTCTTCTTA 58.150 29.630 0.00 0.00 36.25 2.10
4567 7191 5.009854 AGCAAAGCAGAAAAACTAAGCAA 57.990 34.783 0.00 0.00 0.00 3.91
4570 7194 6.183360 TGCAAAAGCAAAGCAGAAAAACTAAG 60.183 34.615 0.00 0.00 33.75 2.18
4577 7201 2.288458 GCATGCAAAAGCAAAGCAGAAA 59.712 40.909 14.21 0.00 42.14 2.52
4588 7212 3.305094 CGCCTCAAAATAGCATGCAAAAG 59.695 43.478 21.98 6.84 0.00 2.27
4608 7232 2.030946 GCATCACCATAACTGTTCTCGC 59.969 50.000 0.00 0.00 0.00 5.03
4665 7383 4.158394 GCTAAACAGCCATTTTCCATCTCA 59.842 41.667 0.00 0.00 0.00 3.27
4689 7407 3.563808 TGAACACACAGCCTAATCAACAC 59.436 43.478 0.00 0.00 0.00 3.32
4708 7426 2.355108 GCAGTAGGATGAACAGGCTGAA 60.355 50.000 23.66 6.63 0.00 3.02
4766 7823 7.421530 TGTGTTCAGAATTTAGAGTTACAGC 57.578 36.000 0.00 0.00 0.00 4.40
4813 7871 1.059657 CGCTGAAATTTGACACGCCG 61.060 55.000 0.00 0.00 0.00 6.46
4815 7873 0.660005 TGCGCTGAAATTTGACACGC 60.660 50.000 9.73 11.68 44.70 5.34
4892 7951 2.128035 CAGAAGTTGTGTGTCTCCGAC 58.872 52.381 0.00 0.00 0.00 4.79
4906 7965 2.211250 AATGTGATGGCTGCAGAAGT 57.789 45.000 20.43 0.59 0.00 3.01
4970 8042 0.865769 GACACGAAAGATGGCGTTGT 59.134 50.000 0.00 0.00 38.92 3.32
4984 8056 0.250295 AATGTGGTGGTGAGGACACG 60.250 55.000 0.00 0.00 46.77 4.49
4986 8058 1.202879 GGAAATGTGGTGGTGAGGACA 60.203 52.381 0.00 0.00 0.00 4.02
4990 8062 1.881973 CACTGGAAATGTGGTGGTGAG 59.118 52.381 0.00 0.00 0.00 3.51
5010 8082 3.165071 TCCCTTTTCTCTTTGGCATTCC 58.835 45.455 0.00 0.00 0.00 3.01
5031 8103 0.399454 ACACTCTCCATGTGCTTGCT 59.601 50.000 0.00 0.00 38.86 3.91
5032 8104 0.801251 GACACTCTCCATGTGCTTGC 59.199 55.000 0.00 0.00 38.86 4.01
5033 8105 1.271001 TGGACACTCTCCATGTGCTTG 60.271 52.381 0.00 0.00 44.99 4.01
5034 8106 1.059098 TGGACACTCTCCATGTGCTT 58.941 50.000 0.00 0.00 44.99 3.91
5035 8107 2.764007 TGGACACTCTCCATGTGCT 58.236 52.632 0.00 0.00 44.99 4.40
5055 8127 3.070302 AGCTACCTCGATTCCAATTCTCC 59.930 47.826 0.00 0.00 0.00 3.71
5081 8153 3.108288 GCCCAGTGCCCTAGCCTAC 62.108 68.421 0.00 0.00 38.69 3.18
5099 8172 4.101448 CCGGCCTTGGACTCCAGG 62.101 72.222 0.00 0.00 33.81 4.45
5107 8187 2.030412 GTTTTTGGCCGGCCTTGG 59.970 61.111 43.34 0.00 36.94 3.61
5108 8188 2.030412 GGTTTTTGGCCGGCCTTG 59.970 61.111 43.34 0.00 36.94 3.61
5156 8251 0.980423 GGCCCTGAGAAGTGAGAACT 59.020 55.000 0.00 0.00 0.00 3.01
5229 8377 2.650116 GGACGAGCAGGAGGAGCAA 61.650 63.158 0.00 0.00 0.00 3.91
5259 8407 3.909651 GGGTGGTTGCCCCTGGAA 61.910 66.667 0.00 0.00 42.89 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.