Multiple sequence alignment - TraesCS2A01G173700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G173700 chr2A 100.000 2228 0 0 1 2228 131713832 131711605 0.000000e+00 4115
1 TraesCS2A01G173700 chr2A 92.049 327 22 1 305 627 601252704 601252378 7.250000e-125 457
2 TraesCS2A01G173700 chr2A 90.379 343 29 3 289 627 656474202 656474544 4.360000e-122 448
3 TraesCS2A01G173700 chr2D 94.851 874 23 9 1373 2228 125344983 125344114 0.000000e+00 1345
4 TraesCS2A01G173700 chr2D 89.771 743 49 12 657 1388 125421512 125420786 0.000000e+00 926
5 TraesCS2A01G173700 chr2D 90.270 185 16 2 18 202 631194446 631194264 7.950000e-60 241
6 TraesCS2A01G173700 chr2D 89.474 190 18 2 12 201 532608017 532608204 2.860000e-59 239
7 TraesCS2A01G173700 chr2B 92.515 668 28 6 1581 2228 178731949 178731284 0.000000e+00 937
8 TraesCS2A01G173700 chr2B 88.265 588 49 12 763 1346 178759324 178758753 0.000000e+00 686
9 TraesCS2A01G173700 chr2B 84.979 233 20 8 1364 1595 178732186 178731968 2.880000e-54 222
10 TraesCS2A01G173700 chr1A 93.189 323 19 2 305 627 120512571 120512252 2.590000e-129 472
11 TraesCS2A01G173700 chr1A 92.593 324 23 1 305 627 127505657 127505334 4.330000e-127 464
12 TraesCS2A01G173700 chr1A 91.768 328 23 1 305 628 305208541 305208868 9.380000e-124 453
13 TraesCS2A01G173700 chr6A 92.355 327 21 1 305 627 110490857 110491183 1.560000e-126 462
14 TraesCS2A01G173700 chr7A 91.768 328 23 1 304 627 34843178 34843505 9.380000e-124 453
15 TraesCS2A01G173700 chr7A 74.910 554 119 15 1662 2205 46911761 46911218 3.700000e-58 235
16 TraesCS2A01G173700 chr7A 73.351 379 84 14 1614 1982 163916284 163915913 8.350000e-25 124
17 TraesCS2A01G173700 chr5A 91.768 328 22 2 305 628 506540536 506540210 3.370000e-123 451
18 TraesCS2A01G173700 chr4A 90.504 337 28 1 295 627 43264978 43264642 2.030000e-120 442
19 TraesCS2A01G173700 chr1D 90.374 187 16 2 15 201 458763413 458763229 6.150000e-61 244
20 TraesCS2A01G173700 chr1D 90.374 187 16 2 15 201 471759072 471759256 6.150000e-61 244
21 TraesCS2A01G173700 chr7D 90.323 186 16 2 16 201 510608150 510608333 2.210000e-60 243
22 TraesCS2A01G173700 chr7D 89.894 188 17 2 16 203 181008227 181008042 7.950000e-60 241
23 TraesCS2A01G173700 chr7D 73.312 622 138 22 1614 2221 163011470 163010863 1.040000e-48 204
24 TraesCS2A01G173700 chrUn 89.474 190 18 2 12 201 235136033 235136220 2.860000e-59 239
25 TraesCS2A01G173700 chrUn 89.474 190 18 2 12 201 395778300 395778487 2.860000e-59 239
26 TraesCS2A01G173700 chr6D 89.583 192 15 5 12 201 348607395 348607207 2.860000e-59 239


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G173700 chr2A 131711605 131713832 2227 True 4115.0 4115 100.000 1 2228 1 chr2A.!!$R1 2227
1 TraesCS2A01G173700 chr2D 125344114 125344983 869 True 1345.0 1345 94.851 1373 2228 1 chr2D.!!$R1 855
2 TraesCS2A01G173700 chr2D 125420786 125421512 726 True 926.0 926 89.771 657 1388 1 chr2D.!!$R2 731
3 TraesCS2A01G173700 chr2B 178758753 178759324 571 True 686.0 686 88.265 763 1346 1 chr2B.!!$R1 583
4 TraesCS2A01G173700 chr2B 178731284 178732186 902 True 579.5 937 88.747 1364 2228 2 chr2B.!!$R2 864
5 TraesCS2A01G173700 chr7A 46911218 46911761 543 True 235.0 235 74.910 1662 2205 1 chr7A.!!$R1 543
6 TraesCS2A01G173700 chr7D 163010863 163011470 607 True 204.0 204 73.312 1614 2221 1 chr7D.!!$R1 607

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
304 305 0.033796 ACATAAGTGGCATGGCAGCT 60.034 50.0 24.03 18.78 34.17 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1499 1526 0.250252 TTCTCGGCACAATCACTGCA 60.25 50.0 0.0 0.0 36.27 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.927281 ATGATACTAACGTGTAAGGGTGT 57.073 39.130 0.00 0.00 0.00 4.16
23 24 5.063180 TGATACTAACGTGTAAGGGTGTG 57.937 43.478 0.00 0.00 0.00 3.82
24 25 2.825861 ACTAACGTGTAAGGGTGTGG 57.174 50.000 0.00 0.00 0.00 4.17
25 26 2.318908 ACTAACGTGTAAGGGTGTGGA 58.681 47.619 0.00 0.00 0.00 4.02
26 27 2.901839 ACTAACGTGTAAGGGTGTGGAT 59.098 45.455 0.00 0.00 0.00 3.41
27 28 4.088634 ACTAACGTGTAAGGGTGTGGATA 58.911 43.478 0.00 0.00 0.00 2.59
28 29 3.604875 AACGTGTAAGGGTGTGGATAG 57.395 47.619 0.00 0.00 0.00 2.08
29 30 2.811410 ACGTGTAAGGGTGTGGATAGA 58.189 47.619 0.00 0.00 0.00 1.98
30 31 3.371965 ACGTGTAAGGGTGTGGATAGAT 58.628 45.455 0.00 0.00 0.00 1.98
31 32 3.773119 ACGTGTAAGGGTGTGGATAGATT 59.227 43.478 0.00 0.00 0.00 2.40
32 33 4.224370 ACGTGTAAGGGTGTGGATAGATTT 59.776 41.667 0.00 0.00 0.00 2.17
33 34 4.809426 CGTGTAAGGGTGTGGATAGATTTC 59.191 45.833 0.00 0.00 0.00 2.17
34 35 5.625886 CGTGTAAGGGTGTGGATAGATTTCA 60.626 44.000 0.00 0.00 0.00 2.69
35 36 5.817816 GTGTAAGGGTGTGGATAGATTTCAG 59.182 44.000 0.00 0.00 0.00 3.02
36 37 5.487488 TGTAAGGGTGTGGATAGATTTCAGT 59.513 40.000 0.00 0.00 0.00 3.41
37 38 4.762289 AGGGTGTGGATAGATTTCAGTC 57.238 45.455 0.00 0.00 0.00 3.51
38 39 3.133003 AGGGTGTGGATAGATTTCAGTCG 59.867 47.826 0.00 0.00 0.00 4.18
39 40 3.132289 GGGTGTGGATAGATTTCAGTCGA 59.868 47.826 0.00 0.00 0.00 4.20
40 41 4.113354 GGTGTGGATAGATTTCAGTCGAC 58.887 47.826 7.70 7.70 0.00 4.20
41 42 4.142138 GGTGTGGATAGATTTCAGTCGACT 60.142 45.833 13.58 13.58 0.00 4.18
42 43 4.800993 GTGTGGATAGATTTCAGTCGACTG 59.199 45.833 34.76 34.76 45.08 3.51
67 68 5.615925 ACTTAACCAAGTCTCAGTCAACT 57.384 39.130 0.00 0.00 41.25 3.16
68 69 5.360591 ACTTAACCAAGTCTCAGTCAACTG 58.639 41.667 3.69 3.69 41.25 3.16
69 70 5.128827 ACTTAACCAAGTCTCAGTCAACTGA 59.871 40.000 12.07 12.07 44.65 3.41
70 71 6.183361 ACTTAACCAAGTCTCAGTCAACTGAT 60.183 38.462 12.96 0.00 43.26 2.90
71 72 7.015292 ACTTAACCAAGTCTCAGTCAACTGATA 59.985 37.037 12.96 3.87 43.26 2.15
131 132 9.722056 AGAAAATTTATGTACGAATCTTCATGC 57.278 29.630 0.00 0.00 0.00 4.06
132 133 9.502145 GAAAATTTATGTACGAATCTTCATGCA 57.498 29.630 0.00 0.00 0.00 3.96
133 134 9.507280 AAAATTTATGTACGAATCTTCATGCAG 57.493 29.630 0.00 0.00 0.00 4.41
134 135 6.603237 TTTATGTACGAATCTTCATGCAGG 57.397 37.500 0.00 0.00 0.00 4.85
135 136 3.885724 TGTACGAATCTTCATGCAGGA 57.114 42.857 0.00 0.00 0.00 3.86
136 137 4.406648 TGTACGAATCTTCATGCAGGAT 57.593 40.909 0.03 0.00 0.00 3.24
137 138 4.371786 TGTACGAATCTTCATGCAGGATC 58.628 43.478 0.03 0.00 0.00 3.36
138 139 3.548745 ACGAATCTTCATGCAGGATCA 57.451 42.857 0.03 0.00 0.00 2.92
139 140 3.877559 ACGAATCTTCATGCAGGATCAA 58.122 40.909 0.03 0.00 0.00 2.57
140 141 4.264253 ACGAATCTTCATGCAGGATCAAA 58.736 39.130 0.03 0.00 0.00 2.69
141 142 4.334759 ACGAATCTTCATGCAGGATCAAAG 59.665 41.667 0.03 0.00 0.00 2.77
142 143 4.261072 CGAATCTTCATGCAGGATCAAAGG 60.261 45.833 0.03 0.00 0.00 3.11
143 144 4.515028 ATCTTCATGCAGGATCAAAGGA 57.485 40.909 0.03 0.00 0.00 3.36
144 145 4.305539 TCTTCATGCAGGATCAAAGGAA 57.694 40.909 0.03 0.00 0.00 3.36
145 146 4.863548 TCTTCATGCAGGATCAAAGGAAT 58.136 39.130 0.03 0.00 0.00 3.01
146 147 6.005066 TCTTCATGCAGGATCAAAGGAATA 57.995 37.500 0.03 0.00 0.00 1.75
147 148 6.607970 TCTTCATGCAGGATCAAAGGAATAT 58.392 36.000 0.03 0.00 0.00 1.28
148 149 7.748677 TCTTCATGCAGGATCAAAGGAATATA 58.251 34.615 0.03 0.00 0.00 0.86
149 150 8.219868 TCTTCATGCAGGATCAAAGGAATATAA 58.780 33.333 0.03 0.00 0.00 0.98
150 151 7.750229 TCATGCAGGATCAAAGGAATATAAC 57.250 36.000 0.00 0.00 0.00 1.89
151 152 7.289310 TCATGCAGGATCAAAGGAATATAACA 58.711 34.615 0.00 0.00 0.00 2.41
152 153 7.946219 TCATGCAGGATCAAAGGAATATAACAT 59.054 33.333 0.00 0.00 0.00 2.71
153 154 7.750229 TGCAGGATCAAAGGAATATAACATC 57.250 36.000 0.00 0.00 0.00 3.06
154 155 6.427853 TGCAGGATCAAAGGAATATAACATCG 59.572 38.462 0.00 0.00 0.00 3.84
155 156 6.650807 GCAGGATCAAAGGAATATAACATCGA 59.349 38.462 0.00 0.00 0.00 3.59
156 157 7.360438 GCAGGATCAAAGGAATATAACATCGAC 60.360 40.741 0.00 0.00 0.00 4.20
157 158 7.875041 CAGGATCAAAGGAATATAACATCGACT 59.125 37.037 0.00 0.00 0.00 4.18
158 159 7.875041 AGGATCAAAGGAATATAACATCGACTG 59.125 37.037 0.00 0.00 0.00 3.51
159 160 7.872993 GGATCAAAGGAATATAACATCGACTGA 59.127 37.037 0.00 0.00 0.00 3.41
160 161 8.824159 ATCAAAGGAATATAACATCGACTGAG 57.176 34.615 0.00 0.00 0.00 3.35
161 162 8.007405 TCAAAGGAATATAACATCGACTGAGA 57.993 34.615 0.00 0.00 0.00 3.27
162 163 7.921214 TCAAAGGAATATAACATCGACTGAGAC 59.079 37.037 0.00 0.00 0.00 3.36
163 164 6.961360 AGGAATATAACATCGACTGAGACA 57.039 37.500 0.00 0.00 0.00 3.41
164 165 7.531857 AGGAATATAACATCGACTGAGACAT 57.468 36.000 0.00 0.00 0.00 3.06
165 166 8.637196 AGGAATATAACATCGACTGAGACATA 57.363 34.615 0.00 0.00 0.00 2.29
166 167 9.078990 AGGAATATAACATCGACTGAGACATAA 57.921 33.333 0.00 0.00 0.00 1.90
167 168 9.130312 GGAATATAACATCGACTGAGACATAAC 57.870 37.037 0.00 0.00 0.00 1.89
168 169 8.729529 AATATAACATCGACTGAGACATAACG 57.270 34.615 0.00 0.00 0.00 3.18
169 170 4.696899 AACATCGACTGAGACATAACGA 57.303 40.909 0.00 0.00 0.00 3.85
170 171 4.696899 ACATCGACTGAGACATAACGAA 57.303 40.909 0.00 0.00 33.77 3.85
171 172 5.055642 ACATCGACTGAGACATAACGAAA 57.944 39.130 0.00 0.00 33.77 3.46
172 173 5.651530 ACATCGACTGAGACATAACGAAAT 58.348 37.500 0.00 0.00 33.77 2.17
173 174 5.744345 ACATCGACTGAGACATAACGAAATC 59.256 40.000 0.00 0.00 33.77 2.17
174 175 5.562506 TCGACTGAGACATAACGAAATCT 57.437 39.130 0.00 0.00 0.00 2.40
175 176 6.673154 TCGACTGAGACATAACGAAATCTA 57.327 37.500 0.00 0.00 0.00 1.98
176 177 7.080353 TCGACTGAGACATAACGAAATCTAA 57.920 36.000 0.00 0.00 0.00 2.10
177 178 7.187480 TCGACTGAGACATAACGAAATCTAAG 58.813 38.462 0.00 0.00 0.00 2.18
178 179 6.967767 CGACTGAGACATAACGAAATCTAAGT 59.032 38.462 0.00 0.00 35.87 2.24
179 180 7.164498 CGACTGAGACATAACGAAATCTAAGTC 59.836 40.741 7.33 7.33 42.70 3.01
180 181 6.967767 ACTGAGACATAACGAAATCTAAGTCG 59.032 38.462 0.00 0.00 42.91 4.18
181 182 7.080353 TGAGACATAACGAAATCTAAGTCGA 57.920 36.000 0.00 0.00 39.64 4.20
182 183 6.965500 TGAGACATAACGAAATCTAAGTCGAC 59.035 38.462 7.70 7.70 39.64 4.20
183 184 7.086230 AGACATAACGAAATCTAAGTCGACT 57.914 36.000 13.58 13.58 39.64 4.18
184 185 6.967767 AGACATAACGAAATCTAAGTCGACTG 59.032 38.462 20.85 7.79 39.64 3.51
185 186 6.849502 ACATAACGAAATCTAAGTCGACTGA 58.150 36.000 20.85 13.61 39.64 3.41
186 187 6.967767 ACATAACGAAATCTAAGTCGACTGAG 59.032 38.462 22.32 22.32 39.64 3.35
187 188 5.624344 AACGAAATCTAAGTCGACTGAGA 57.376 39.130 30.58 30.58 39.64 3.27
188 189 4.972201 ACGAAATCTAAGTCGACTGAGAC 58.028 43.478 30.97 18.96 36.33 3.36
198 199 4.632740 GTCGACTGAGACTTAGCAAAAC 57.367 45.455 8.70 0.00 38.09 2.43
199 200 4.299978 GTCGACTGAGACTTAGCAAAACT 58.700 43.478 8.70 0.00 38.09 2.66
200 201 4.149046 GTCGACTGAGACTTAGCAAAACTG 59.851 45.833 8.70 0.00 38.09 3.16
201 202 4.037565 TCGACTGAGACTTAGCAAAACTGA 59.962 41.667 0.00 0.00 0.00 3.41
202 203 4.745125 CGACTGAGACTTAGCAAAACTGAA 59.255 41.667 0.00 0.00 0.00 3.02
203 204 5.332656 CGACTGAGACTTAGCAAAACTGAAC 60.333 44.000 0.00 0.00 0.00 3.18
204 205 4.508124 ACTGAGACTTAGCAAAACTGAACG 59.492 41.667 0.00 0.00 0.00 3.95
205 206 4.439057 TGAGACTTAGCAAAACTGAACGT 58.561 39.130 0.00 0.00 0.00 3.99
206 207 4.270084 TGAGACTTAGCAAAACTGAACGTG 59.730 41.667 0.00 0.00 0.00 4.49
207 208 4.189231 AGACTTAGCAAAACTGAACGTGT 58.811 39.130 0.00 0.00 0.00 4.49
208 209 5.353938 AGACTTAGCAAAACTGAACGTGTA 58.646 37.500 0.00 0.00 0.00 2.90
209 210 5.462398 AGACTTAGCAAAACTGAACGTGTAG 59.538 40.000 0.00 0.00 0.00 2.74
210 211 4.510340 ACTTAGCAAAACTGAACGTGTAGG 59.490 41.667 0.00 0.00 0.00 3.18
211 212 2.914059 AGCAAAACTGAACGTGTAGGT 58.086 42.857 0.00 0.00 0.00 3.08
212 213 4.062677 AGCAAAACTGAACGTGTAGGTA 57.937 40.909 0.00 0.00 0.00 3.08
213 214 3.805971 AGCAAAACTGAACGTGTAGGTAC 59.194 43.478 0.00 0.00 0.00 3.34
214 215 3.805971 GCAAAACTGAACGTGTAGGTACT 59.194 43.478 0.00 0.00 46.37 2.73
215 216 4.984161 GCAAAACTGAACGTGTAGGTACTA 59.016 41.667 0.00 0.00 41.75 1.82
216 217 5.118203 GCAAAACTGAACGTGTAGGTACTAG 59.882 44.000 0.00 0.00 44.14 2.57
217 218 6.211515 CAAAACTGAACGTGTAGGTACTAGT 58.788 40.000 0.00 0.00 44.14 2.57
218 219 5.619625 AACTGAACGTGTAGGTACTAGTC 57.380 43.478 0.00 0.00 44.14 2.59
219 220 4.006319 ACTGAACGTGTAGGTACTAGTCC 58.994 47.826 0.00 0.48 44.14 3.85
220 221 3.002791 TGAACGTGTAGGTACTAGTCCG 58.997 50.000 0.00 0.00 44.14 4.79
221 222 2.770164 ACGTGTAGGTACTAGTCCGT 57.230 50.000 0.00 0.00 44.14 4.69
222 223 3.887621 ACGTGTAGGTACTAGTCCGTA 57.112 47.619 0.00 0.00 44.14 4.02
223 224 3.522553 ACGTGTAGGTACTAGTCCGTAC 58.477 50.000 10.42 10.42 44.14 3.67
232 233 5.421212 GTACTAGTCCGTACCATCTCTTG 57.579 47.826 0.00 0.00 34.97 3.02
233 234 3.965694 ACTAGTCCGTACCATCTCTTGT 58.034 45.455 0.00 0.00 0.00 3.16
234 235 3.695060 ACTAGTCCGTACCATCTCTTGTG 59.305 47.826 0.00 0.00 0.00 3.33
235 236 1.204941 AGTCCGTACCATCTCTTGTGC 59.795 52.381 0.00 0.00 0.00 4.57
236 237 0.535335 TCCGTACCATCTCTTGTGCC 59.465 55.000 0.00 0.00 0.00 5.01
237 238 0.249120 CCGTACCATCTCTTGTGCCA 59.751 55.000 0.00 0.00 0.00 4.92
238 239 1.359848 CGTACCATCTCTTGTGCCAC 58.640 55.000 0.00 0.00 0.00 5.01
239 240 1.066858 CGTACCATCTCTTGTGCCACT 60.067 52.381 0.00 0.00 0.00 4.00
240 241 2.612972 CGTACCATCTCTTGTGCCACTT 60.613 50.000 0.00 0.00 0.00 3.16
241 242 1.901591 ACCATCTCTTGTGCCACTTG 58.098 50.000 0.00 0.00 0.00 3.16
242 243 1.421268 ACCATCTCTTGTGCCACTTGA 59.579 47.619 0.00 0.00 0.00 3.02
243 244 2.082231 CCATCTCTTGTGCCACTTGAG 58.918 52.381 10.08 10.08 0.00 3.02
244 245 2.551721 CCATCTCTTGTGCCACTTGAGT 60.552 50.000 14.06 3.68 0.00 3.41
245 246 3.144506 CATCTCTTGTGCCACTTGAGTT 58.855 45.455 14.06 6.52 0.00 3.01
246 247 2.838736 TCTCTTGTGCCACTTGAGTTC 58.161 47.619 14.06 0.00 0.00 3.01
247 248 1.528586 CTCTTGTGCCACTTGAGTTCG 59.471 52.381 0.00 0.00 0.00 3.95
248 249 1.138069 TCTTGTGCCACTTGAGTTCGA 59.862 47.619 0.00 0.00 0.00 3.71
249 250 1.528586 CTTGTGCCACTTGAGTTCGAG 59.471 52.381 0.00 0.00 0.00 4.04
250 251 0.750249 TGTGCCACTTGAGTTCGAGA 59.250 50.000 3.41 0.00 0.00 4.04
251 252 1.140816 GTGCCACTTGAGTTCGAGAC 58.859 55.000 3.41 0.00 0.00 3.36
252 253 0.750249 TGCCACTTGAGTTCGAGACA 59.250 50.000 3.41 0.00 0.00 3.41
253 254 1.138069 TGCCACTTGAGTTCGAGACAA 59.862 47.619 3.41 0.00 0.00 3.18
254 255 1.527311 GCCACTTGAGTTCGAGACAAC 59.473 52.381 3.41 0.00 0.00 3.32
255 256 2.135933 CCACTTGAGTTCGAGACAACC 58.864 52.381 3.41 0.00 0.00 3.77
256 257 2.224066 CCACTTGAGTTCGAGACAACCT 60.224 50.000 3.41 0.00 0.00 3.50
257 258 2.797156 CACTTGAGTTCGAGACAACCTG 59.203 50.000 3.41 0.00 0.00 4.00
258 259 1.795286 CTTGAGTTCGAGACAACCTGC 59.205 52.381 0.00 0.00 0.00 4.85
259 260 0.750249 TGAGTTCGAGACAACCTGCA 59.250 50.000 0.00 0.00 0.00 4.41
260 261 1.344438 TGAGTTCGAGACAACCTGCAT 59.656 47.619 0.00 0.00 0.00 3.96
261 262 2.560981 TGAGTTCGAGACAACCTGCATA 59.439 45.455 0.00 0.00 0.00 3.14
262 263 3.195610 TGAGTTCGAGACAACCTGCATAT 59.804 43.478 0.00 0.00 0.00 1.78
263 264 4.401202 TGAGTTCGAGACAACCTGCATATA 59.599 41.667 0.00 0.00 0.00 0.86
264 265 5.069119 TGAGTTCGAGACAACCTGCATATAT 59.931 40.000 0.00 0.00 0.00 0.86
265 266 5.292765 AGTTCGAGACAACCTGCATATATG 58.707 41.667 8.45 8.45 0.00 1.78
266 267 5.069119 AGTTCGAGACAACCTGCATATATGA 59.931 40.000 17.10 1.24 0.00 2.15
267 268 5.728637 TCGAGACAACCTGCATATATGAT 57.271 39.130 17.10 0.00 0.00 2.45
268 269 5.714047 TCGAGACAACCTGCATATATGATC 58.286 41.667 17.10 0.19 0.00 2.92
269 270 4.867047 CGAGACAACCTGCATATATGATCC 59.133 45.833 17.10 0.00 0.00 3.36
270 271 5.337089 CGAGACAACCTGCATATATGATCCT 60.337 44.000 17.10 1.57 0.00 3.24
271 272 5.802465 AGACAACCTGCATATATGATCCTG 58.198 41.667 17.10 8.42 0.00 3.86
272 273 5.309020 AGACAACCTGCATATATGATCCTGT 59.691 40.000 17.10 11.25 0.00 4.00
273 274 6.498303 AGACAACCTGCATATATGATCCTGTA 59.502 38.462 17.10 0.00 0.00 2.74
274 275 7.016563 AGACAACCTGCATATATGATCCTGTAA 59.983 37.037 17.10 0.00 0.00 2.41
275 276 7.517320 ACAACCTGCATATATGATCCTGTAAA 58.483 34.615 17.10 0.00 0.00 2.01
276 277 7.998383 ACAACCTGCATATATGATCCTGTAAAA 59.002 33.333 17.10 0.00 0.00 1.52
277 278 8.849168 CAACCTGCATATATGATCCTGTAAAAA 58.151 33.333 17.10 0.00 0.00 1.94
278 279 8.627208 ACCTGCATATATGATCCTGTAAAAAG 57.373 34.615 17.10 0.00 0.00 2.27
279 280 7.667219 ACCTGCATATATGATCCTGTAAAAAGG 59.333 37.037 17.10 7.02 38.84 3.11
292 293 7.970102 TCCTGTAAAAAGGAGTGTACATAAGT 58.030 34.615 0.00 0.00 41.60 2.24
293 294 7.876068 TCCTGTAAAAAGGAGTGTACATAAGTG 59.124 37.037 0.00 0.00 41.60 3.16
294 295 7.119262 CCTGTAAAAAGGAGTGTACATAAGTGG 59.881 40.741 0.00 0.00 40.02 4.00
295 296 5.959618 AAAAAGGAGTGTACATAAGTGGC 57.040 39.130 0.00 0.00 0.00 5.01
296 297 4.634012 AAAGGAGTGTACATAAGTGGCA 57.366 40.909 0.00 0.00 0.00 4.92
297 298 4.844349 AAGGAGTGTACATAAGTGGCAT 57.156 40.909 0.00 0.00 0.00 4.40
298 299 4.142609 AGGAGTGTACATAAGTGGCATG 57.857 45.455 0.00 0.00 0.00 4.06
299 300 3.118261 AGGAGTGTACATAAGTGGCATGG 60.118 47.826 0.00 0.00 0.00 3.66
300 301 2.614057 GAGTGTACATAAGTGGCATGGC 59.386 50.000 13.29 13.29 0.00 4.40
301 302 2.026356 AGTGTACATAAGTGGCATGGCA 60.026 45.455 19.43 19.43 0.00 4.92
302 303 2.355756 GTGTACATAAGTGGCATGGCAG 59.644 50.000 24.03 13.01 0.00 4.85
303 304 1.334869 GTACATAAGTGGCATGGCAGC 59.665 52.381 24.03 16.84 0.00 5.25
304 305 0.033796 ACATAAGTGGCATGGCAGCT 60.034 50.000 24.03 18.78 34.17 4.24
305 306 1.212688 ACATAAGTGGCATGGCAGCTA 59.787 47.619 24.03 16.56 34.17 3.32
306 307 1.605710 CATAAGTGGCATGGCAGCTAC 59.394 52.381 24.03 10.95 45.16 3.58
308 309 3.819188 GTGGCATGGCAGCTACTC 58.181 61.111 24.03 5.82 42.03 2.59
309 310 1.821332 GTGGCATGGCAGCTACTCC 60.821 63.158 24.03 5.02 42.03 3.85
310 311 2.203266 GGCATGGCAGCTACTCCC 60.203 66.667 15.47 0.00 34.17 4.30
311 312 2.750657 GGCATGGCAGCTACTCCCT 61.751 63.158 15.47 0.00 34.17 4.20
312 313 1.227793 GCATGGCAGCTACTCCCTC 60.228 63.158 0.00 0.00 0.00 4.30
313 314 1.449353 CATGGCAGCTACTCCCTCC 59.551 63.158 0.00 0.00 0.00 4.30
314 315 1.053264 CATGGCAGCTACTCCCTCCT 61.053 60.000 0.00 0.00 0.00 3.69
315 316 0.327000 ATGGCAGCTACTCCCTCCTT 60.327 55.000 0.00 0.00 0.00 3.36
316 317 0.547712 TGGCAGCTACTCCCTCCTTT 60.548 55.000 0.00 0.00 0.00 3.11
317 318 0.179234 GGCAGCTACTCCCTCCTTTC 59.821 60.000 0.00 0.00 0.00 2.62
318 319 0.179234 GCAGCTACTCCCTCCTTTCC 59.821 60.000 0.00 0.00 0.00 3.13
319 320 0.461961 CAGCTACTCCCTCCTTTCCG 59.538 60.000 0.00 0.00 0.00 4.30
320 321 0.688087 AGCTACTCCCTCCTTTCCGG 60.688 60.000 0.00 0.00 0.00 5.14
321 322 0.976590 GCTACTCCCTCCTTTCCGGT 60.977 60.000 0.00 0.00 0.00 5.28
322 323 1.569653 CTACTCCCTCCTTTCCGGTT 58.430 55.000 0.00 0.00 0.00 4.44
323 324 1.907255 CTACTCCCTCCTTTCCGGTTT 59.093 52.381 0.00 0.00 0.00 3.27
324 325 2.034436 ACTCCCTCCTTTCCGGTTTA 57.966 50.000 0.00 0.00 0.00 2.01
325 326 2.558974 ACTCCCTCCTTTCCGGTTTAT 58.441 47.619 0.00 0.00 0.00 1.40
326 327 3.727948 ACTCCCTCCTTTCCGGTTTATA 58.272 45.455 0.00 0.00 0.00 0.98
327 328 3.710165 ACTCCCTCCTTTCCGGTTTATAG 59.290 47.826 0.00 0.00 0.00 1.31
328 329 3.043418 TCCCTCCTTTCCGGTTTATAGG 58.957 50.000 0.00 4.62 0.00 2.57
329 330 2.105993 CCCTCCTTTCCGGTTTATAGGG 59.894 54.545 16.03 16.03 36.05 3.53
330 331 2.775960 CCTCCTTTCCGGTTTATAGGGT 59.224 50.000 0.00 0.00 0.00 4.34
331 332 3.201487 CCTCCTTTCCGGTTTATAGGGTT 59.799 47.826 0.00 0.00 0.00 4.11
332 333 4.324797 CCTCCTTTCCGGTTTATAGGGTTT 60.325 45.833 0.00 0.00 0.00 3.27
333 334 5.104402 CCTCCTTTCCGGTTTATAGGGTTTA 60.104 44.000 0.00 0.00 0.00 2.01
334 335 6.410041 CCTCCTTTCCGGTTTATAGGGTTTAT 60.410 42.308 0.00 0.00 0.00 1.40
335 336 6.972490 TCCTTTCCGGTTTATAGGGTTTATT 58.028 36.000 0.00 0.00 0.00 1.40
336 337 7.412627 TCCTTTCCGGTTTATAGGGTTTATTT 58.587 34.615 0.00 0.00 0.00 1.40
337 338 7.557358 TCCTTTCCGGTTTATAGGGTTTATTTC 59.443 37.037 0.00 0.00 0.00 2.17
338 339 7.339976 CCTTTCCGGTTTATAGGGTTTATTTCA 59.660 37.037 0.00 0.00 0.00 2.69
339 340 8.647256 TTTCCGGTTTATAGGGTTTATTTCAA 57.353 30.769 0.00 0.00 0.00 2.69
340 341 8.647256 TTCCGGTTTATAGGGTTTATTTCAAA 57.353 30.769 0.00 0.00 0.00 2.69
341 342 8.647256 TCCGGTTTATAGGGTTTATTTCAAAA 57.353 30.769 0.00 0.00 0.00 2.44
342 343 9.257428 TCCGGTTTATAGGGTTTATTTCAAAAT 57.743 29.630 0.00 0.00 0.00 1.82
343 344 9.878667 CCGGTTTATAGGGTTTATTTCAAAATT 57.121 29.630 0.00 0.00 0.00 1.82
375 376 9.447157 TTTTCCATTTTATAAGGCTCAATTTGG 57.553 29.630 0.00 0.00 0.00 3.28
376 377 7.732222 TCCATTTTATAAGGCTCAATTTGGT 57.268 32.000 0.00 0.00 0.00 3.67
377 378 8.144862 TCCATTTTATAAGGCTCAATTTGGTT 57.855 30.769 0.00 0.00 0.00 3.67
378 379 8.040132 TCCATTTTATAAGGCTCAATTTGGTTG 58.960 33.333 0.00 0.00 39.25 3.77
379 380 7.823799 CCATTTTATAAGGCTCAATTTGGTTGT 59.176 33.333 0.00 0.00 38.95 3.32
380 381 9.218440 CATTTTATAAGGCTCAATTTGGTTGTT 57.782 29.630 0.00 0.00 38.95 2.83
381 382 8.825667 TTTTATAAGGCTCAATTTGGTTGTTC 57.174 30.769 0.00 0.00 38.95 3.18
382 383 3.751479 AAGGCTCAATTTGGTTGTTCC 57.249 42.857 0.00 0.00 38.95 3.62
383 384 1.970640 AGGCTCAATTTGGTTGTTCCC 59.029 47.619 0.00 0.00 38.95 3.97
384 385 1.001974 GGCTCAATTTGGTTGTTCCCC 59.998 52.381 0.00 0.00 38.95 4.81
385 386 1.691434 GCTCAATTTGGTTGTTCCCCA 59.309 47.619 0.00 0.00 38.95 4.96
386 387 2.302733 GCTCAATTTGGTTGTTCCCCAT 59.697 45.455 0.00 0.00 38.95 4.00
387 388 3.617288 GCTCAATTTGGTTGTTCCCCATC 60.617 47.826 0.00 0.00 38.95 3.51
388 389 3.577848 CTCAATTTGGTTGTTCCCCATCA 59.422 43.478 0.00 0.00 38.95 3.07
389 390 4.166539 TCAATTTGGTTGTTCCCCATCAT 58.833 39.130 0.00 0.00 38.95 2.45
390 391 5.336945 TCAATTTGGTTGTTCCCCATCATA 58.663 37.500 0.00 0.00 38.95 2.15
391 392 5.963253 TCAATTTGGTTGTTCCCCATCATAT 59.037 36.000 0.00 0.00 38.95 1.78
392 393 5.874897 ATTTGGTTGTTCCCCATCATATG 57.125 39.130 0.00 0.00 34.77 1.78
393 394 4.329638 TTGGTTGTTCCCCATCATATGT 57.670 40.909 1.90 0.00 34.77 2.29
394 395 4.329638 TGGTTGTTCCCCATCATATGTT 57.670 40.909 1.90 0.00 34.77 2.71
395 396 4.277476 TGGTTGTTCCCCATCATATGTTC 58.723 43.478 1.90 0.00 34.77 3.18
396 397 4.264128 TGGTTGTTCCCCATCATATGTTCA 60.264 41.667 1.90 0.00 34.77 3.18
397 398 4.339247 GGTTGTTCCCCATCATATGTTCAG 59.661 45.833 1.90 0.00 0.00 3.02
398 399 5.192927 GTTGTTCCCCATCATATGTTCAGA 58.807 41.667 1.90 0.00 0.00 3.27
399 400 5.651612 TGTTCCCCATCATATGTTCAGAT 57.348 39.130 1.90 0.00 0.00 2.90
400 401 6.017211 TGTTCCCCATCATATGTTCAGATT 57.983 37.500 1.90 0.00 0.00 2.40
401 402 6.434302 TGTTCCCCATCATATGTTCAGATTT 58.566 36.000 1.90 0.00 0.00 2.17
402 403 6.547141 TGTTCCCCATCATATGTTCAGATTTC 59.453 38.462 1.90 0.00 0.00 2.17
403 404 6.264771 TCCCCATCATATGTTCAGATTTCA 57.735 37.500 1.90 0.00 0.00 2.69
404 405 6.671605 TCCCCATCATATGTTCAGATTTCAA 58.328 36.000 1.90 0.00 0.00 2.69
405 406 6.774170 TCCCCATCATATGTTCAGATTTCAAG 59.226 38.462 1.90 0.00 0.00 3.02
406 407 6.774170 CCCCATCATATGTTCAGATTTCAAGA 59.226 38.462 1.90 0.00 0.00 3.02
407 408 7.450634 CCCCATCATATGTTCAGATTTCAAGAT 59.549 37.037 1.90 0.00 0.00 2.40
408 409 8.297426 CCCATCATATGTTCAGATTTCAAGATG 58.703 37.037 1.90 0.00 0.00 2.90
409 410 7.808381 CCATCATATGTTCAGATTTCAAGATGC 59.192 37.037 1.90 0.00 0.00 3.91
410 411 7.868906 TCATATGTTCAGATTTCAAGATGCA 57.131 32.000 1.90 0.00 0.00 3.96
411 412 8.459911 TCATATGTTCAGATTTCAAGATGCAT 57.540 30.769 0.00 0.00 0.00 3.96
412 413 8.909923 TCATATGTTCAGATTTCAAGATGCATT 58.090 29.630 0.00 0.00 0.00 3.56
417 418 9.577110 TGTTCAGATTTCAAGATGCATTAAATC 57.423 29.630 19.55 19.55 37.00 2.17
418 419 9.577110 GTTCAGATTTCAAGATGCATTAAATCA 57.423 29.630 24.27 12.47 38.45 2.57
422 423 9.042008 AGATTTCAAGATGCATTAAATCATTGC 57.958 29.630 24.27 10.16 38.45 3.56
429 430 5.726729 TGCATTAAATCATTGCATGCAAG 57.273 34.783 34.15 25.40 40.64 4.01
430 431 5.179533 TGCATTAAATCATTGCATGCAAGT 58.820 33.333 34.15 21.32 40.64 3.16
431 432 6.338937 TGCATTAAATCATTGCATGCAAGTA 58.661 32.000 34.15 25.25 40.64 2.24
432 433 6.987404 TGCATTAAATCATTGCATGCAAGTAT 59.013 30.769 34.15 26.18 40.64 2.12
433 434 7.496263 TGCATTAAATCATTGCATGCAAGTATT 59.504 29.630 34.15 29.40 40.64 1.89
434 435 8.980610 GCATTAAATCATTGCATGCAAGTATTA 58.019 29.630 34.15 25.22 39.47 0.98
438 439 8.867112 AAATCATTGCATGCAAGTATTAAGAG 57.133 30.769 34.15 16.39 39.47 2.85
439 440 7.812690 ATCATTGCATGCAAGTATTAAGAGA 57.187 32.000 34.15 20.12 39.47 3.10
440 441 7.628769 TCATTGCATGCAAGTATTAAGAGAA 57.371 32.000 34.15 10.64 39.47 2.87
441 442 8.054152 TCATTGCATGCAAGTATTAAGAGAAA 57.946 30.769 34.15 10.19 39.47 2.52
442 443 8.522003 TCATTGCATGCAAGTATTAAGAGAAAA 58.478 29.630 34.15 9.52 39.47 2.29
443 444 8.589629 CATTGCATGCAAGTATTAAGAGAAAAC 58.410 33.333 34.15 0.00 39.47 2.43
444 445 7.452880 TGCATGCAAGTATTAAGAGAAAACT 57.547 32.000 20.30 0.00 0.00 2.66
445 446 7.307694 TGCATGCAAGTATTAAGAGAAAACTG 58.692 34.615 20.30 0.00 0.00 3.16
446 447 7.174772 TGCATGCAAGTATTAAGAGAAAACTGA 59.825 33.333 20.30 0.00 0.00 3.41
447 448 7.695618 GCATGCAAGTATTAAGAGAAAACTGAG 59.304 37.037 14.21 0.00 0.00 3.35
448 449 7.133891 TGCAAGTATTAAGAGAAAACTGAGC 57.866 36.000 0.00 0.00 0.00 4.26
449 450 6.710295 TGCAAGTATTAAGAGAAAACTGAGCA 59.290 34.615 0.00 0.00 32.83 4.26
450 451 7.228507 TGCAAGTATTAAGAGAAAACTGAGCAA 59.771 33.333 0.00 0.00 32.54 3.91
451 452 8.239998 GCAAGTATTAAGAGAAAACTGAGCAAT 58.760 33.333 0.00 0.00 0.00 3.56
452 453 9.552114 CAAGTATTAAGAGAAAACTGAGCAATG 57.448 33.333 0.00 0.00 0.00 2.82
453 454 7.756558 AGTATTAAGAGAAAACTGAGCAATGC 58.243 34.615 0.00 0.00 0.00 3.56
454 455 6.579666 ATTAAGAGAAAACTGAGCAATGCA 57.420 33.333 8.35 0.00 0.00 3.96
455 456 6.579666 TTAAGAGAAAACTGAGCAATGCAT 57.420 33.333 8.35 0.00 0.00 3.96
456 457 4.436242 AGAGAAAACTGAGCAATGCATG 57.564 40.909 8.35 0.00 0.00 4.06
530 531 9.598517 TTGTTGAGAAAAACAAGAGCATTAATT 57.401 25.926 0.00 0.00 43.34 1.40
531 532 9.033481 TGTTGAGAAAAACAAGAGCATTAATTG 57.967 29.630 0.00 0.00 37.12 2.32
532 533 8.490355 GTTGAGAAAAACAAGAGCATTAATTGG 58.510 33.333 0.00 0.00 0.00 3.16
533 534 7.950512 TGAGAAAAACAAGAGCATTAATTGGA 58.049 30.769 0.00 0.00 0.00 3.53
534 535 8.587608 TGAGAAAAACAAGAGCATTAATTGGAT 58.412 29.630 0.00 0.00 0.00 3.41
538 539 8.707938 AAAACAAGAGCATTAATTGGATAAGC 57.292 30.769 0.00 0.00 0.00 3.09
539 540 7.408756 AACAAGAGCATTAATTGGATAAGCA 57.591 32.000 0.00 0.00 0.00 3.91
540 541 7.408756 ACAAGAGCATTAATTGGATAAGCAA 57.591 32.000 0.00 0.00 0.00 3.91
541 542 7.839907 ACAAGAGCATTAATTGGATAAGCAAA 58.160 30.769 0.00 0.00 0.00 3.68
542 543 7.761249 ACAAGAGCATTAATTGGATAAGCAAAC 59.239 33.333 0.00 0.00 0.00 2.93
543 544 7.651027 AGAGCATTAATTGGATAAGCAAACT 57.349 32.000 0.00 0.00 0.00 2.66
544 545 8.752005 AGAGCATTAATTGGATAAGCAAACTA 57.248 30.769 0.00 0.00 0.00 2.24
545 546 9.359653 AGAGCATTAATTGGATAAGCAAACTAT 57.640 29.630 0.00 0.00 0.00 2.12
574 575 9.754382 AAAATATTGCACCACTCATCATTTATC 57.246 29.630 0.00 0.00 0.00 1.75
575 576 8.701908 AATATTGCACCACTCATCATTTATCT 57.298 30.769 0.00 0.00 0.00 1.98
576 577 8.701908 ATATTGCACCACTCATCATTTATCTT 57.298 30.769 0.00 0.00 0.00 2.40
577 578 9.797642 ATATTGCACCACTCATCATTTATCTTA 57.202 29.630 0.00 0.00 0.00 2.10
578 579 7.558161 TTGCACCACTCATCATTTATCTTAG 57.442 36.000 0.00 0.00 0.00 2.18
579 580 6.653020 TGCACCACTCATCATTTATCTTAGT 58.347 36.000 0.00 0.00 0.00 2.24
580 581 7.112122 TGCACCACTCATCATTTATCTTAGTT 58.888 34.615 0.00 0.00 0.00 2.24
581 582 7.066163 TGCACCACTCATCATTTATCTTAGTTG 59.934 37.037 0.00 0.00 0.00 3.16
582 583 7.467811 GCACCACTCATCATTTATCTTAGTTGG 60.468 40.741 0.00 0.00 0.00 3.77
583 584 7.554118 CACCACTCATCATTTATCTTAGTTGGT 59.446 37.037 0.00 0.00 0.00 3.67
584 585 7.554118 ACCACTCATCATTTATCTTAGTTGGTG 59.446 37.037 0.00 0.00 0.00 4.17
585 586 7.770433 CCACTCATCATTTATCTTAGTTGGTGA 59.230 37.037 0.00 0.00 0.00 4.02
586 587 8.824781 CACTCATCATTTATCTTAGTTGGTGAG 58.175 37.037 9.34 9.34 46.25 3.51
587 588 8.762645 ACTCATCATTTATCTTAGTTGGTGAGA 58.237 33.333 16.07 0.00 44.55 3.27
588 589 9.775854 CTCATCATTTATCTTAGTTGGTGAGAT 57.224 33.333 5.74 0.00 44.55 2.75
601 602 9.691362 TTAGTTGGTGAGATTTTTAAATTGAGC 57.309 29.630 0.00 0.00 0.00 4.26
602 603 7.154656 AGTTGGTGAGATTTTTAAATTGAGCC 58.845 34.615 0.00 0.00 0.00 4.70
603 604 6.916360 TGGTGAGATTTTTAAATTGAGCCT 57.084 33.333 0.00 0.00 0.00 4.58
604 605 7.301868 TGGTGAGATTTTTAAATTGAGCCTT 57.698 32.000 0.00 0.00 0.00 4.35
605 606 8.415950 TGGTGAGATTTTTAAATTGAGCCTTA 57.584 30.769 0.00 0.00 0.00 2.69
606 607 9.034800 TGGTGAGATTTTTAAATTGAGCCTTAT 57.965 29.630 0.00 0.00 0.00 1.73
613 614 8.989653 TTTTTAAATTGAGCCTTATAAACCGG 57.010 30.769 0.00 0.00 0.00 5.28
614 615 7.941431 TTTAAATTGAGCCTTATAAACCGGA 57.059 32.000 9.46 0.00 0.00 5.14
615 616 7.941431 TTAAATTGAGCCTTATAAACCGGAA 57.059 32.000 9.46 0.00 0.00 4.30
616 617 6.844097 AAATTGAGCCTTATAAACCGGAAA 57.156 33.333 9.46 0.00 0.00 3.13
617 618 6.451064 AATTGAGCCTTATAAACCGGAAAG 57.549 37.500 9.46 3.38 0.00 2.62
619 620 3.520317 TGAGCCTTATAAACCGGAAAGGA 59.480 43.478 9.46 0.00 45.00 3.36
620 621 4.127907 GAGCCTTATAAACCGGAAAGGAG 58.872 47.826 9.46 0.00 45.00 3.69
621 622 3.118000 AGCCTTATAAACCGGAAAGGAGG 60.118 47.826 9.46 9.29 45.00 4.30
622 623 3.118149 GCCTTATAAACCGGAAAGGAGGA 60.118 47.826 9.46 0.00 45.00 3.71
623 624 4.627013 GCCTTATAAACCGGAAAGGAGGAA 60.627 45.833 9.46 0.00 45.00 3.36
624 625 5.123936 CCTTATAAACCGGAAAGGAGGAAG 58.876 45.833 9.46 0.80 45.00 3.46
625 626 5.338953 CCTTATAAACCGGAAAGGAGGAAGT 60.339 44.000 9.46 0.00 45.00 3.01
626 627 6.126968 CCTTATAAACCGGAAAGGAGGAAGTA 60.127 42.308 9.46 0.00 45.00 2.24
627 628 3.413846 AAACCGGAAAGGAGGAAGTAC 57.586 47.619 9.46 0.00 45.00 2.73
628 629 1.273759 ACCGGAAAGGAGGAAGTACC 58.726 55.000 9.46 0.00 45.00 3.34
629 630 1.272807 CCGGAAAGGAGGAAGTACCA 58.727 55.000 0.00 0.00 45.00 3.25
630 631 1.838077 CCGGAAAGGAGGAAGTACCAT 59.162 52.381 0.00 0.00 45.00 3.55
631 632 2.420129 CCGGAAAGGAGGAAGTACCATG 60.420 54.545 0.00 0.00 45.00 3.66
632 633 2.236395 CGGAAAGGAGGAAGTACCATGT 59.764 50.000 0.00 0.00 42.04 3.21
633 634 3.449737 CGGAAAGGAGGAAGTACCATGTA 59.550 47.826 0.00 0.00 42.04 2.29
634 635 4.441634 CGGAAAGGAGGAAGTACCATGTAG 60.442 50.000 0.00 0.00 42.04 2.74
635 636 4.443621 GAAAGGAGGAAGTACCATGTAGC 58.556 47.826 0.00 0.00 42.04 3.58
636 637 2.399580 AGGAGGAAGTACCATGTAGCC 58.600 52.381 0.00 0.00 42.04 3.93
637 638 2.116238 GGAGGAAGTACCATGTAGCCA 58.884 52.381 0.00 0.00 42.04 4.75
638 639 2.103263 GGAGGAAGTACCATGTAGCCAG 59.897 54.545 0.00 0.00 42.04 4.85
639 640 1.486726 AGGAAGTACCATGTAGCCAGC 59.513 52.381 0.00 0.00 42.04 4.85
640 641 1.209504 GGAAGTACCATGTAGCCAGCA 59.790 52.381 0.00 0.00 38.79 4.41
641 642 2.555199 GAAGTACCATGTAGCCAGCAG 58.445 52.381 0.00 0.00 0.00 4.24
642 643 1.573108 AGTACCATGTAGCCAGCAGT 58.427 50.000 0.00 0.00 0.00 4.40
643 644 1.909302 AGTACCATGTAGCCAGCAGTT 59.091 47.619 0.00 0.00 0.00 3.16
644 645 2.009774 GTACCATGTAGCCAGCAGTTG 58.990 52.381 0.00 0.00 0.00 3.16
645 646 0.692476 ACCATGTAGCCAGCAGTTGA 59.308 50.000 0.00 0.00 0.00 3.18
646 647 1.089920 CCATGTAGCCAGCAGTTGAC 58.910 55.000 0.00 0.00 0.00 3.18
647 648 0.723414 CATGTAGCCAGCAGTTGACG 59.277 55.000 0.00 0.00 0.00 4.35
648 649 0.608130 ATGTAGCCAGCAGTTGACGA 59.392 50.000 0.00 0.00 0.00 4.20
649 650 0.608130 TGTAGCCAGCAGTTGACGAT 59.392 50.000 0.00 0.00 0.00 3.73
650 651 1.822371 TGTAGCCAGCAGTTGACGATA 59.178 47.619 0.00 0.00 0.00 2.92
651 652 2.159240 TGTAGCCAGCAGTTGACGATAG 60.159 50.000 0.00 0.00 46.19 2.08
679 680 4.566278 CCATTCTCTGAAGTGACCATGGAA 60.566 45.833 21.47 2.77 32.08 3.53
716 717 4.400251 TCCACGAAACAATACTCGGAGTAT 59.600 41.667 21.95 21.95 42.86 2.12
744 745 1.203052 CGCCTGTTTGCATTCCATCTT 59.797 47.619 0.00 0.00 0.00 2.40
750 751 6.400568 CCTGTTTGCATTCCATCTTGTAAAT 58.599 36.000 0.00 0.00 31.66 1.40
751 752 6.875195 CCTGTTTGCATTCCATCTTGTAAATT 59.125 34.615 0.00 0.00 31.66 1.82
752 753 7.148540 CCTGTTTGCATTCCATCTTGTAAATTG 60.149 37.037 0.00 0.00 31.66 2.32
757 758 5.870978 GCATTCCATCTTGTAAATTGCACTT 59.129 36.000 0.00 0.00 0.00 3.16
758 759 6.183360 GCATTCCATCTTGTAAATTGCACTTG 60.183 38.462 0.00 0.00 0.00 3.16
759 760 4.808558 TCCATCTTGTAAATTGCACTTGC 58.191 39.130 0.00 0.00 42.50 4.01
760 761 4.523943 TCCATCTTGTAAATTGCACTTGCT 59.476 37.500 2.33 0.00 42.66 3.91
761 762 5.709631 TCCATCTTGTAAATTGCACTTGCTA 59.290 36.000 2.33 0.00 42.66 3.49
787 788 2.555757 AGTCTTGGAATTGCAACAGAGC 59.444 45.455 8.47 1.70 0.00 4.09
803 804 4.129737 GCCGCCTCGTACTCTGCA 62.130 66.667 0.00 0.00 0.00 4.41
804 805 2.103143 CCGCCTCGTACTCTGCAG 59.897 66.667 7.63 7.63 0.00 4.41
805 806 2.407428 CCGCCTCGTACTCTGCAGA 61.407 63.158 17.19 17.19 0.00 4.26
806 807 1.226435 CGCCTCGTACTCTGCAGAC 60.226 63.158 13.74 2.74 0.00 3.51
807 808 1.649390 CGCCTCGTACTCTGCAGACT 61.649 60.000 13.74 6.72 0.00 3.24
810 811 1.332375 CCTCGTACTCTGCAGACTAGC 59.668 57.143 13.74 2.62 0.00 3.42
811 812 2.285083 CTCGTACTCTGCAGACTAGCT 58.715 52.381 13.74 0.00 34.99 3.32
812 813 3.459145 CTCGTACTCTGCAGACTAGCTA 58.541 50.000 13.74 0.00 34.99 3.32
813 814 3.196463 TCGTACTCTGCAGACTAGCTAC 58.804 50.000 13.74 7.91 34.99 3.58
864 876 0.329261 CCCAGTCCCAAGAATGCAGA 59.671 55.000 0.00 0.00 36.76 4.26
894 906 1.075542 GCGCGGCAGCACAATATATA 58.924 50.000 8.83 0.00 45.49 0.86
895 907 1.463056 GCGCGGCAGCACAATATATAA 59.537 47.619 8.83 0.00 45.49 0.98
896 908 2.095853 GCGCGGCAGCACAATATATAAT 59.904 45.455 8.83 0.00 45.49 1.28
903 915 5.065731 GGCAGCACAATATATAATGCTCCTC 59.934 44.000 16.89 10.92 45.11 3.71
904 916 5.645067 GCAGCACAATATATAATGCTCCTCA 59.355 40.000 16.89 0.00 45.11 3.86
950 962 1.002502 CCACCCGTTTCTCCCCTTC 60.003 63.158 0.00 0.00 0.00 3.46
951 963 1.002502 CACCCGTTTCTCCCCTTCC 60.003 63.158 0.00 0.00 0.00 3.46
968 980 2.787473 TCCTTCTGCCATACACCAAG 57.213 50.000 0.00 0.00 0.00 3.61
974 987 3.826524 TCTGCCATACACCAAGACAAAA 58.173 40.909 0.00 0.00 0.00 2.44
975 988 4.211125 TCTGCCATACACCAAGACAAAAA 58.789 39.130 0.00 0.00 0.00 1.94
1250 1263 2.401195 GCGATCGCCTGCTTTCAC 59.599 61.111 29.48 0.00 34.56 3.18
1264 1277 1.847999 CTTTCACAAGCTGTTGCAACG 59.152 47.619 23.79 18.61 42.74 4.10
1286 1299 5.098218 GGTGATCTTCAGCGTACTAGTAG 57.902 47.826 1.87 0.00 35.04 2.57
1312 1329 3.704566 CCAGTGGAGTATACCAGCAGTTA 59.295 47.826 1.68 0.00 40.85 2.24
1318 1335 6.264744 GTGGAGTATACCAGCAGTTATGTAGA 59.735 42.308 0.00 0.00 40.85 2.59
1440 1457 4.086199 GGTGAACGAAACAAACTTGTCA 57.914 40.909 0.00 0.00 41.31 3.58
1441 1458 3.849708 GGTGAACGAAACAAACTTGTCAC 59.150 43.478 0.00 0.00 41.31 3.67
1442 1459 4.379082 GGTGAACGAAACAAACTTGTCACT 60.379 41.667 0.00 0.00 41.31 3.41
1443 1460 5.151389 GTGAACGAAACAAACTTGTCACTT 58.849 37.500 0.00 0.00 41.31 3.16
1444 1461 6.308675 GTGAACGAAACAAACTTGTCACTTA 58.691 36.000 0.00 0.00 41.31 2.24
1445 1462 6.964934 GTGAACGAAACAAACTTGTCACTTAT 59.035 34.615 0.00 0.00 41.31 1.73
1480 1507 8.293157 TGTTGCAATCGACAATCATAGTTAAAA 58.707 29.630 0.59 0.00 33.79 1.52
1530 1557 1.002430 TGCCGAGAACAGCATCTCTTT 59.998 47.619 11.03 0.00 43.00 2.52
1546 1573 9.167311 AGCATCTCTTTATTCTAAATCAAACGT 57.833 29.630 0.00 0.00 0.00 3.99
1547 1574 9.214953 GCATCTCTTTATTCTAAATCAAACGTG 57.785 33.333 0.00 0.00 0.00 4.49
1548 1575 9.214953 CATCTCTTTATTCTAAATCAAACGTGC 57.785 33.333 0.00 0.00 0.00 5.34
1549 1576 7.453034 TCTCTTTATTCTAAATCAAACGTGCG 58.547 34.615 0.00 0.00 0.00 5.34
2075 2141 2.591715 AAGTGCCACAGCGACACC 60.592 61.111 0.00 0.00 44.31 4.16
2106 2172 2.181021 GGTCCCTGCAGACGTACG 59.819 66.667 17.39 15.01 37.66 3.67
2108 2174 3.755628 TCCCTGCAGACGTACGCC 61.756 66.667 17.39 3.66 0.00 5.68
2150 2228 4.954118 TCGGGGAGCAGGGTGTGT 62.954 66.667 0.00 0.00 0.00 3.72
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.394883 CCACACCCTTACACGTTAGTATCAT 60.395 44.000 0.00 0.00 0.00 2.45
1 2 4.082081 CCACACCCTTACACGTTAGTATCA 60.082 45.833 0.00 0.00 0.00 2.15
2 3 4.158394 TCCACACCCTTACACGTTAGTATC 59.842 45.833 0.00 0.00 0.00 2.24
3 4 4.088634 TCCACACCCTTACACGTTAGTAT 58.911 43.478 0.00 0.00 0.00 2.12
4 5 3.495331 TCCACACCCTTACACGTTAGTA 58.505 45.455 0.00 0.00 0.00 1.82
5 6 2.318908 TCCACACCCTTACACGTTAGT 58.681 47.619 0.00 0.00 0.00 2.24
6 7 3.604875 ATCCACACCCTTACACGTTAG 57.395 47.619 0.00 0.00 0.00 2.34
7 8 4.343231 TCTATCCACACCCTTACACGTTA 58.657 43.478 0.00 0.00 0.00 3.18
8 9 3.167485 TCTATCCACACCCTTACACGTT 58.833 45.455 0.00 0.00 0.00 3.99
9 10 2.811410 TCTATCCACACCCTTACACGT 58.189 47.619 0.00 0.00 0.00 4.49
10 11 4.402056 AATCTATCCACACCCTTACACG 57.598 45.455 0.00 0.00 0.00 4.49
11 12 5.741011 TGAAATCTATCCACACCCTTACAC 58.259 41.667 0.00 0.00 0.00 2.90
12 13 5.487488 ACTGAAATCTATCCACACCCTTACA 59.513 40.000 0.00 0.00 0.00 2.41
13 14 5.990668 ACTGAAATCTATCCACACCCTTAC 58.009 41.667 0.00 0.00 0.00 2.34
14 15 5.163447 CGACTGAAATCTATCCACACCCTTA 60.163 44.000 0.00 0.00 0.00 2.69
15 16 4.383118 CGACTGAAATCTATCCACACCCTT 60.383 45.833 0.00 0.00 0.00 3.95
16 17 3.133003 CGACTGAAATCTATCCACACCCT 59.867 47.826 0.00 0.00 0.00 4.34
17 18 3.132289 TCGACTGAAATCTATCCACACCC 59.868 47.826 0.00 0.00 0.00 4.61
18 19 4.113354 GTCGACTGAAATCTATCCACACC 58.887 47.826 8.70 0.00 0.00 4.16
19 20 4.800993 CAGTCGACTGAAATCTATCCACAC 59.199 45.833 36.73 0.00 46.59 3.82
20 21 4.998788 CAGTCGACTGAAATCTATCCACA 58.001 43.478 36.73 0.00 46.59 4.17
30 31 9.242291 ACTTGGTTAAGTCTCAGTCGACTGAAA 62.242 40.741 39.25 29.90 45.14 2.69
31 32 7.855881 ACTTGGTTAAGTCTCAGTCGACTGAA 61.856 42.308 39.25 28.85 45.14 3.02
32 33 6.438740 ACTTGGTTAAGTCTCAGTCGACTGA 61.439 44.000 38.24 38.24 45.53 3.41
33 34 3.917329 TGGTTAAGTCTCAGTCGACTG 57.083 47.619 34.76 34.76 43.14 3.51
34 35 3.890147 ACTTGGTTAAGTCTCAGTCGACT 59.110 43.478 13.58 13.58 43.53 4.18
35 36 4.240175 ACTTGGTTAAGTCTCAGTCGAC 57.760 45.455 7.70 7.70 43.53 4.20
45 46 5.128827 TCAGTTGACTGAGACTTGGTTAAGT 59.871 40.000 9.67 0.00 46.94 2.24
46 47 5.914085 CAGTTGACTGAGACTTGGTTAAG 57.086 43.478 5.19 0.00 46.59 1.85
105 106 9.722056 GCATGAAGATTCGTACATAAATTTTCT 57.278 29.630 0.00 0.00 31.03 2.52
106 107 9.502145 TGCATGAAGATTCGTACATAAATTTTC 57.498 29.630 0.00 2.04 30.60 2.29
107 108 9.507280 CTGCATGAAGATTCGTACATAAATTTT 57.493 29.630 0.00 0.00 0.00 1.82
108 109 8.131100 CCTGCATGAAGATTCGTACATAAATTT 58.869 33.333 0.74 0.00 0.00 1.82
109 110 7.498900 TCCTGCATGAAGATTCGTACATAAATT 59.501 33.333 0.74 0.00 0.00 1.82
110 111 6.992123 TCCTGCATGAAGATTCGTACATAAAT 59.008 34.615 0.74 0.00 0.00 1.40
111 112 6.345298 TCCTGCATGAAGATTCGTACATAAA 58.655 36.000 0.74 0.00 0.00 1.40
112 113 5.912892 TCCTGCATGAAGATTCGTACATAA 58.087 37.500 0.74 0.00 0.00 1.90
113 114 5.529581 TCCTGCATGAAGATTCGTACATA 57.470 39.130 0.74 0.00 0.00 2.29
114 115 4.406648 TCCTGCATGAAGATTCGTACAT 57.593 40.909 0.74 0.00 0.00 2.29
115 116 3.885724 TCCTGCATGAAGATTCGTACA 57.114 42.857 0.74 0.00 0.00 2.90
116 117 4.371786 TGATCCTGCATGAAGATTCGTAC 58.628 43.478 0.74 0.00 0.00 3.67
117 118 4.670896 TGATCCTGCATGAAGATTCGTA 57.329 40.909 0.74 0.00 0.00 3.43
118 119 3.548745 TGATCCTGCATGAAGATTCGT 57.451 42.857 0.74 0.00 0.00 3.85
119 120 4.261072 CCTTTGATCCTGCATGAAGATTCG 60.261 45.833 0.74 0.00 0.00 3.34
120 121 4.885907 TCCTTTGATCCTGCATGAAGATTC 59.114 41.667 0.74 0.00 0.00 2.52
121 122 4.863548 TCCTTTGATCCTGCATGAAGATT 58.136 39.130 0.74 0.00 0.00 2.40
122 123 4.515028 TCCTTTGATCCTGCATGAAGAT 57.485 40.909 0.74 0.00 0.00 2.40
123 124 4.305539 TTCCTTTGATCCTGCATGAAGA 57.694 40.909 0.74 0.00 0.00 2.87
124 125 6.896021 ATATTCCTTTGATCCTGCATGAAG 57.104 37.500 0.00 0.00 0.00 3.02
125 126 7.779326 TGTTATATTCCTTTGATCCTGCATGAA 59.221 33.333 0.00 0.00 0.00 2.57
126 127 7.289310 TGTTATATTCCTTTGATCCTGCATGA 58.711 34.615 0.00 0.00 0.00 3.07
127 128 7.514784 TGTTATATTCCTTTGATCCTGCATG 57.485 36.000 0.00 0.00 0.00 4.06
128 129 7.120285 CGATGTTATATTCCTTTGATCCTGCAT 59.880 37.037 0.00 0.00 0.00 3.96
129 130 6.427853 CGATGTTATATTCCTTTGATCCTGCA 59.572 38.462 0.00 0.00 0.00 4.41
130 131 6.650807 TCGATGTTATATTCCTTTGATCCTGC 59.349 38.462 0.00 0.00 0.00 4.85
131 132 7.875041 AGTCGATGTTATATTCCTTTGATCCTG 59.125 37.037 0.00 0.00 0.00 3.86
132 133 7.875041 CAGTCGATGTTATATTCCTTTGATCCT 59.125 37.037 0.00 0.00 0.00 3.24
133 134 7.872993 TCAGTCGATGTTATATTCCTTTGATCC 59.127 37.037 0.00 0.00 0.00 3.36
134 135 8.818141 TCAGTCGATGTTATATTCCTTTGATC 57.182 34.615 0.00 0.00 0.00 2.92
135 136 8.642432 TCTCAGTCGATGTTATATTCCTTTGAT 58.358 33.333 0.00 0.00 0.00 2.57
136 137 7.921214 GTCTCAGTCGATGTTATATTCCTTTGA 59.079 37.037 0.00 0.00 0.00 2.69
137 138 7.706607 TGTCTCAGTCGATGTTATATTCCTTTG 59.293 37.037 0.00 0.00 0.00 2.77
138 139 7.782049 TGTCTCAGTCGATGTTATATTCCTTT 58.218 34.615 0.00 0.00 0.00 3.11
139 140 7.348080 TGTCTCAGTCGATGTTATATTCCTT 57.652 36.000 0.00 0.00 0.00 3.36
140 141 6.961360 TGTCTCAGTCGATGTTATATTCCT 57.039 37.500 0.00 0.00 0.00 3.36
141 142 9.130312 GTTATGTCTCAGTCGATGTTATATTCC 57.870 37.037 0.00 0.00 0.00 3.01
142 143 8.841822 CGTTATGTCTCAGTCGATGTTATATTC 58.158 37.037 0.00 0.00 0.00 1.75
143 144 8.565416 TCGTTATGTCTCAGTCGATGTTATATT 58.435 33.333 0.00 0.00 0.00 1.28
144 145 8.095937 TCGTTATGTCTCAGTCGATGTTATAT 57.904 34.615 0.00 0.00 0.00 0.86
145 146 7.486802 TCGTTATGTCTCAGTCGATGTTATA 57.513 36.000 0.00 0.00 0.00 0.98
146 147 6.373186 TCGTTATGTCTCAGTCGATGTTAT 57.627 37.500 0.00 0.00 0.00 1.89
147 148 5.806366 TCGTTATGTCTCAGTCGATGTTA 57.194 39.130 0.00 0.00 0.00 2.41
148 149 4.696899 TCGTTATGTCTCAGTCGATGTT 57.303 40.909 0.00 0.00 0.00 2.71
149 150 4.696899 TTCGTTATGTCTCAGTCGATGT 57.303 40.909 0.00 0.00 0.00 3.06
150 151 5.974158 AGATTTCGTTATGTCTCAGTCGATG 59.026 40.000 0.00 0.00 0.00 3.84
151 152 6.137794 AGATTTCGTTATGTCTCAGTCGAT 57.862 37.500 0.00 0.00 0.00 3.59
152 153 5.562506 AGATTTCGTTATGTCTCAGTCGA 57.437 39.130 0.00 0.00 0.00 4.20
153 154 6.967767 ACTTAGATTTCGTTATGTCTCAGTCG 59.032 38.462 0.00 0.00 0.00 4.18
154 155 7.164498 CGACTTAGATTTCGTTATGTCTCAGTC 59.836 40.741 0.00 0.00 38.03 3.51
155 156 6.967767 CGACTTAGATTTCGTTATGTCTCAGT 59.032 38.462 0.00 0.00 30.24 3.41
156 157 7.164498 GTCGACTTAGATTTCGTTATGTCTCAG 59.836 40.741 8.70 0.00 36.60 3.35
157 158 6.965500 GTCGACTTAGATTTCGTTATGTCTCA 59.035 38.462 8.70 0.00 36.60 3.27
158 159 7.164498 CAGTCGACTTAGATTTCGTTATGTCTC 59.836 40.741 17.26 0.00 36.60 3.36
159 160 6.967767 CAGTCGACTTAGATTTCGTTATGTCT 59.032 38.462 17.26 0.00 36.60 3.41
160 161 6.965500 TCAGTCGACTTAGATTTCGTTATGTC 59.035 38.462 17.26 0.00 36.60 3.06
161 162 6.849502 TCAGTCGACTTAGATTTCGTTATGT 58.150 36.000 17.26 0.00 36.60 2.29
162 163 7.164498 GTCTCAGTCGACTTAGATTTCGTTATG 59.836 40.741 27.34 8.71 36.60 1.90
163 164 7.066043 AGTCTCAGTCGACTTAGATTTCGTTAT 59.934 37.037 27.34 8.20 41.27 1.89
164 165 6.370994 AGTCTCAGTCGACTTAGATTTCGTTA 59.629 38.462 27.34 4.85 41.27 3.18
165 166 5.181622 AGTCTCAGTCGACTTAGATTTCGTT 59.818 40.000 27.34 10.42 41.27 3.85
166 167 4.696402 AGTCTCAGTCGACTTAGATTTCGT 59.304 41.667 27.34 11.15 41.27 3.85
167 168 5.224562 AGTCTCAGTCGACTTAGATTTCG 57.775 43.478 27.34 10.32 41.27 3.46
176 177 4.038162 AGTTTTGCTAAGTCTCAGTCGACT 59.962 41.667 13.58 13.58 45.73 4.18
177 178 4.149046 CAGTTTTGCTAAGTCTCAGTCGAC 59.851 45.833 7.70 7.70 0.00 4.20
178 179 4.037565 TCAGTTTTGCTAAGTCTCAGTCGA 59.962 41.667 0.00 0.00 0.00 4.20
179 180 4.299155 TCAGTTTTGCTAAGTCTCAGTCG 58.701 43.478 0.00 0.00 0.00 4.18
180 181 5.332656 CGTTCAGTTTTGCTAAGTCTCAGTC 60.333 44.000 0.00 0.00 0.00 3.51
181 182 4.508124 CGTTCAGTTTTGCTAAGTCTCAGT 59.492 41.667 0.00 0.00 0.00 3.41
182 183 4.508124 ACGTTCAGTTTTGCTAAGTCTCAG 59.492 41.667 0.00 0.00 0.00 3.35
183 184 4.270084 CACGTTCAGTTTTGCTAAGTCTCA 59.730 41.667 0.00 0.00 0.00 3.27
184 185 4.270325 ACACGTTCAGTTTTGCTAAGTCTC 59.730 41.667 0.00 0.00 0.00 3.36
185 186 4.189231 ACACGTTCAGTTTTGCTAAGTCT 58.811 39.130 0.00 0.00 0.00 3.24
186 187 4.531659 ACACGTTCAGTTTTGCTAAGTC 57.468 40.909 0.00 0.00 0.00 3.01
187 188 4.510340 CCTACACGTTCAGTTTTGCTAAGT 59.490 41.667 0.00 0.00 0.00 2.24
188 189 4.510340 ACCTACACGTTCAGTTTTGCTAAG 59.490 41.667 0.00 0.00 0.00 2.18
189 190 4.444536 ACCTACACGTTCAGTTTTGCTAA 58.555 39.130 0.00 0.00 0.00 3.09
190 191 4.062677 ACCTACACGTTCAGTTTTGCTA 57.937 40.909 0.00 0.00 0.00 3.49
191 192 2.914059 ACCTACACGTTCAGTTTTGCT 58.086 42.857 0.00 0.00 0.00 3.91
192 193 3.805971 AGTACCTACACGTTCAGTTTTGC 59.194 43.478 0.00 0.00 0.00 3.68
193 194 6.211515 ACTAGTACCTACACGTTCAGTTTTG 58.788 40.000 0.00 0.00 0.00 2.44
194 195 6.396829 ACTAGTACCTACACGTTCAGTTTT 57.603 37.500 0.00 0.00 0.00 2.43
195 196 5.048434 GGACTAGTACCTACACGTTCAGTTT 60.048 44.000 0.00 0.00 0.00 2.66
196 197 4.457257 GGACTAGTACCTACACGTTCAGTT 59.543 45.833 0.00 0.00 0.00 3.16
197 198 4.006319 GGACTAGTACCTACACGTTCAGT 58.994 47.826 0.00 0.00 0.00 3.41
198 199 3.063180 CGGACTAGTACCTACACGTTCAG 59.937 52.174 0.00 0.00 0.00 3.02
199 200 3.002791 CGGACTAGTACCTACACGTTCA 58.997 50.000 0.00 0.00 0.00 3.18
200 201 3.003480 ACGGACTAGTACCTACACGTTC 58.997 50.000 0.00 0.00 0.00 3.95
201 202 3.059352 ACGGACTAGTACCTACACGTT 57.941 47.619 0.00 0.00 0.00 3.99
202 203 2.770164 ACGGACTAGTACCTACACGT 57.230 50.000 0.00 0.00 0.00 4.49
210 211 4.880696 ACAAGAGATGGTACGGACTAGTAC 59.119 45.833 0.00 0.00 44.50 2.73
211 212 4.880120 CACAAGAGATGGTACGGACTAGTA 59.120 45.833 0.00 0.00 0.00 1.82
212 213 3.695060 CACAAGAGATGGTACGGACTAGT 59.305 47.826 0.00 0.00 0.00 2.57
213 214 3.489398 GCACAAGAGATGGTACGGACTAG 60.489 52.174 0.00 0.00 0.00 2.57
214 215 2.426024 GCACAAGAGATGGTACGGACTA 59.574 50.000 0.00 0.00 0.00 2.59
215 216 1.204941 GCACAAGAGATGGTACGGACT 59.795 52.381 0.00 0.00 0.00 3.85
216 217 1.641577 GCACAAGAGATGGTACGGAC 58.358 55.000 0.00 0.00 0.00 4.79
217 218 0.535335 GGCACAAGAGATGGTACGGA 59.465 55.000 0.00 0.00 0.00 4.69
218 219 0.249120 TGGCACAAGAGATGGTACGG 59.751 55.000 0.00 0.00 31.92 4.02
219 220 1.066858 AGTGGCACAAGAGATGGTACG 60.067 52.381 21.41 0.00 44.16 3.67
220 221 2.744202 CAAGTGGCACAAGAGATGGTAC 59.256 50.000 21.41 0.00 44.16 3.34
221 222 2.637382 TCAAGTGGCACAAGAGATGGTA 59.363 45.455 21.41 0.00 44.16 3.25
222 223 1.421268 TCAAGTGGCACAAGAGATGGT 59.579 47.619 21.41 0.00 44.16 3.55
223 224 2.082231 CTCAAGTGGCACAAGAGATGG 58.918 52.381 25.78 7.45 44.16 3.51
224 225 2.775890 ACTCAAGTGGCACAAGAGATG 58.224 47.619 32.28 17.17 44.16 2.90
225 226 3.406764 GAACTCAAGTGGCACAAGAGAT 58.593 45.455 32.28 25.25 44.16 2.75
226 227 2.803133 CGAACTCAAGTGGCACAAGAGA 60.803 50.000 32.28 18.75 44.16 3.10
227 228 1.528586 CGAACTCAAGTGGCACAAGAG 59.471 52.381 27.20 27.20 44.16 2.85
228 229 1.138069 TCGAACTCAAGTGGCACAAGA 59.862 47.619 21.41 15.38 44.16 3.02
229 230 1.528586 CTCGAACTCAAGTGGCACAAG 59.471 52.381 21.41 15.69 44.16 3.16
230 231 1.138069 TCTCGAACTCAAGTGGCACAA 59.862 47.619 21.41 3.75 44.16 3.33
231 232 0.750249 TCTCGAACTCAAGTGGCACA 59.250 50.000 21.41 0.00 0.00 4.57
232 233 1.140816 GTCTCGAACTCAAGTGGCAC 58.859 55.000 10.29 10.29 0.00 5.01
233 234 0.750249 TGTCTCGAACTCAAGTGGCA 59.250 50.000 0.00 0.00 0.00 4.92
234 235 1.527311 GTTGTCTCGAACTCAAGTGGC 59.473 52.381 0.00 0.00 0.00 5.01
235 236 2.135933 GGTTGTCTCGAACTCAAGTGG 58.864 52.381 0.00 0.00 0.00 4.00
236 237 2.797156 CAGGTTGTCTCGAACTCAAGTG 59.203 50.000 0.00 0.00 0.00 3.16
237 238 2.803492 GCAGGTTGTCTCGAACTCAAGT 60.803 50.000 0.00 0.00 0.00 3.16
238 239 1.795286 GCAGGTTGTCTCGAACTCAAG 59.205 52.381 0.00 0.00 0.00 3.02
239 240 1.138069 TGCAGGTTGTCTCGAACTCAA 59.862 47.619 0.00 0.00 0.00 3.02
240 241 0.750249 TGCAGGTTGTCTCGAACTCA 59.250 50.000 0.00 0.00 0.00 3.41
241 242 2.086054 ATGCAGGTTGTCTCGAACTC 57.914 50.000 0.00 0.00 0.00 3.01
242 243 3.895232 ATATGCAGGTTGTCTCGAACT 57.105 42.857 0.00 0.00 0.00 3.01
243 244 5.289595 TCATATATGCAGGTTGTCTCGAAC 58.710 41.667 7.92 0.00 0.00 3.95
244 245 5.529581 TCATATATGCAGGTTGTCTCGAA 57.470 39.130 7.92 0.00 0.00 3.71
245 246 5.336770 GGATCATATATGCAGGTTGTCTCGA 60.337 44.000 7.92 0.00 0.00 4.04
246 247 4.867047 GGATCATATATGCAGGTTGTCTCG 59.133 45.833 7.92 0.00 0.00 4.04
247 248 5.873712 CAGGATCATATATGCAGGTTGTCTC 59.126 44.000 7.92 0.00 0.00 3.36
248 249 5.309020 ACAGGATCATATATGCAGGTTGTCT 59.691 40.000 7.92 0.00 0.00 3.41
249 250 5.555017 ACAGGATCATATATGCAGGTTGTC 58.445 41.667 7.92 0.00 0.00 3.18
250 251 5.573380 ACAGGATCATATATGCAGGTTGT 57.427 39.130 7.92 6.00 0.00 3.32
251 252 7.984422 TTTACAGGATCATATATGCAGGTTG 57.016 36.000 7.92 5.44 0.00 3.77
252 253 8.995027 TTTTTACAGGATCATATATGCAGGTT 57.005 30.769 7.92 0.00 0.00 3.50
253 254 7.667219 CCTTTTTACAGGATCATATATGCAGGT 59.333 37.037 7.92 4.63 35.71 4.00
254 255 7.884877 TCCTTTTTACAGGATCATATATGCAGG 59.115 37.037 7.92 0.00 38.11 4.85
255 256 8.853077 TCCTTTTTACAGGATCATATATGCAG 57.147 34.615 7.92 0.00 38.11 4.41
256 257 8.439971 ACTCCTTTTTACAGGATCATATATGCA 58.560 33.333 7.92 0.00 42.42 3.96
257 258 8.725148 CACTCCTTTTTACAGGATCATATATGC 58.275 37.037 7.92 0.00 42.42 3.14
258 259 9.784531 ACACTCCTTTTTACAGGATCATATATG 57.215 33.333 6.36 6.36 42.42 1.78
261 262 8.768397 TGTACACTCCTTTTTACAGGATCATAT 58.232 33.333 0.00 0.00 42.42 1.78
262 263 8.141298 TGTACACTCCTTTTTACAGGATCATA 57.859 34.615 0.00 0.00 42.42 2.15
263 264 7.016153 TGTACACTCCTTTTTACAGGATCAT 57.984 36.000 0.00 0.00 42.42 2.45
264 265 6.428083 TGTACACTCCTTTTTACAGGATCA 57.572 37.500 0.00 0.00 42.42 2.92
265 266 9.099454 CTTATGTACACTCCTTTTTACAGGATC 57.901 37.037 0.00 0.00 42.42 3.36
266 267 8.603304 ACTTATGTACACTCCTTTTTACAGGAT 58.397 33.333 0.00 0.00 42.42 3.24
267 268 7.876068 CACTTATGTACACTCCTTTTTACAGGA 59.124 37.037 0.00 0.00 41.00 3.86
268 269 7.119262 CCACTTATGTACACTCCTTTTTACAGG 59.881 40.741 0.00 0.00 34.86 4.00
269 270 7.360946 GCCACTTATGTACACTCCTTTTTACAG 60.361 40.741 0.00 0.00 0.00 2.74
270 271 6.428771 GCCACTTATGTACACTCCTTTTTACA 59.571 38.462 0.00 0.00 0.00 2.41
271 272 6.428771 TGCCACTTATGTACACTCCTTTTTAC 59.571 38.462 0.00 0.00 0.00 2.01
272 273 6.535540 TGCCACTTATGTACACTCCTTTTTA 58.464 36.000 0.00 0.00 0.00 1.52
273 274 5.381757 TGCCACTTATGTACACTCCTTTTT 58.618 37.500 0.00 0.00 0.00 1.94
274 275 4.980573 TGCCACTTATGTACACTCCTTTT 58.019 39.130 0.00 0.00 0.00 2.27
275 276 4.634012 TGCCACTTATGTACACTCCTTT 57.366 40.909 0.00 0.00 0.00 3.11
276 277 4.517285 CATGCCACTTATGTACACTCCTT 58.483 43.478 0.00 0.00 0.00 3.36
277 278 3.118261 CCATGCCACTTATGTACACTCCT 60.118 47.826 0.00 0.00 0.00 3.69
278 279 3.206150 CCATGCCACTTATGTACACTCC 58.794 50.000 0.00 0.00 0.00 3.85
279 280 2.614057 GCCATGCCACTTATGTACACTC 59.386 50.000 0.00 0.00 0.00 3.51
280 281 2.026356 TGCCATGCCACTTATGTACACT 60.026 45.455 0.00 0.00 0.00 3.55
281 282 2.355756 CTGCCATGCCACTTATGTACAC 59.644 50.000 0.00 0.00 0.00 2.90
282 283 2.642427 CTGCCATGCCACTTATGTACA 58.358 47.619 0.00 0.00 0.00 2.90
283 284 1.334869 GCTGCCATGCCACTTATGTAC 59.665 52.381 0.00 0.00 0.00 2.90
284 285 1.212688 AGCTGCCATGCCACTTATGTA 59.787 47.619 0.00 0.00 0.00 2.29
285 286 0.033796 AGCTGCCATGCCACTTATGT 60.034 50.000 0.00 0.00 0.00 2.29
286 287 1.605710 GTAGCTGCCATGCCACTTATG 59.394 52.381 0.00 0.00 0.00 1.90
287 288 1.492176 AGTAGCTGCCATGCCACTTAT 59.508 47.619 0.00 0.00 31.27 1.73
288 289 0.911769 AGTAGCTGCCATGCCACTTA 59.088 50.000 0.00 0.00 31.27 2.24
289 290 0.393537 GAGTAGCTGCCATGCCACTT 60.394 55.000 0.00 0.00 35.24 3.16
290 291 1.222936 GAGTAGCTGCCATGCCACT 59.777 57.895 0.00 0.00 37.60 4.00
291 292 1.821332 GGAGTAGCTGCCATGCCAC 60.821 63.158 0.00 0.00 0.00 5.01
292 293 2.591753 GGAGTAGCTGCCATGCCA 59.408 61.111 0.00 0.00 0.00 4.92
293 294 2.203266 GGGAGTAGCTGCCATGCC 60.203 66.667 0.00 0.00 41.77 4.40
294 295 1.227793 GAGGGAGTAGCTGCCATGC 60.228 63.158 9.28 0.00 44.71 4.06
295 296 1.053264 AGGAGGGAGTAGCTGCCATG 61.053 60.000 9.28 0.00 44.71 3.66
296 297 0.327000 AAGGAGGGAGTAGCTGCCAT 60.327 55.000 9.28 0.00 44.71 4.40
297 298 0.547712 AAAGGAGGGAGTAGCTGCCA 60.548 55.000 9.28 0.00 44.71 4.92
298 299 0.179234 GAAAGGAGGGAGTAGCTGCC 59.821 60.000 0.00 0.00 42.52 4.85
299 300 0.179234 GGAAAGGAGGGAGTAGCTGC 59.821 60.000 0.00 0.00 0.00 5.25
300 301 0.461961 CGGAAAGGAGGGAGTAGCTG 59.538 60.000 0.00 0.00 0.00 4.24
301 302 0.688087 CCGGAAAGGAGGGAGTAGCT 60.688 60.000 0.00 0.00 45.00 3.32
302 303 0.976590 ACCGGAAAGGAGGGAGTAGC 60.977 60.000 9.46 0.00 45.00 3.58
303 304 1.569653 AACCGGAAAGGAGGGAGTAG 58.430 55.000 9.46 0.00 45.00 2.57
304 305 2.034436 AAACCGGAAAGGAGGGAGTA 57.966 50.000 9.46 0.00 45.00 2.59
305 306 2.034436 TAAACCGGAAAGGAGGGAGT 57.966 50.000 9.46 0.00 45.00 3.85
306 307 3.071167 CCTATAAACCGGAAAGGAGGGAG 59.929 52.174 9.46 0.00 45.00 4.30
307 308 3.043418 CCTATAAACCGGAAAGGAGGGA 58.957 50.000 9.46 0.00 45.00 4.20
308 309 2.105993 CCCTATAAACCGGAAAGGAGGG 59.894 54.545 9.46 14.71 45.00 4.30
309 310 2.775960 ACCCTATAAACCGGAAAGGAGG 59.224 50.000 9.46 9.03 45.00 4.30
310 311 4.498894 AACCCTATAAACCGGAAAGGAG 57.501 45.455 9.46 0.00 45.00 3.69
311 312 4.932911 AAACCCTATAAACCGGAAAGGA 57.067 40.909 9.46 0.00 45.00 3.36
313 314 8.283699 TGAAATAAACCCTATAAACCGGAAAG 57.716 34.615 9.46 0.00 0.00 2.62
314 315 8.647256 TTGAAATAAACCCTATAAACCGGAAA 57.353 30.769 9.46 0.00 0.00 3.13
315 316 8.647256 TTTGAAATAAACCCTATAAACCGGAA 57.353 30.769 9.46 0.00 0.00 4.30
316 317 8.647256 TTTTGAAATAAACCCTATAAACCGGA 57.353 30.769 9.46 0.00 0.00 5.14
317 318 9.878667 AATTTTGAAATAAACCCTATAAACCGG 57.121 29.630 0.00 0.00 0.00 5.28
349 350 9.447157 CCAAATTGAGCCTTATAAAATGGAAAA 57.553 29.630 0.00 0.00 0.00 2.29
350 351 8.601546 ACCAAATTGAGCCTTATAAAATGGAAA 58.398 29.630 0.00 0.00 0.00 3.13
351 352 8.144862 ACCAAATTGAGCCTTATAAAATGGAA 57.855 30.769 0.00 0.00 0.00 3.53
352 353 7.732222 ACCAAATTGAGCCTTATAAAATGGA 57.268 32.000 0.00 0.00 0.00 3.41
353 354 7.823799 ACAACCAAATTGAGCCTTATAAAATGG 59.176 33.333 0.00 0.00 41.23 3.16
354 355 8.776376 ACAACCAAATTGAGCCTTATAAAATG 57.224 30.769 0.00 0.00 41.23 2.32
355 356 9.435688 GAACAACCAAATTGAGCCTTATAAAAT 57.564 29.630 0.00 0.00 41.23 1.82
356 357 7.875554 GGAACAACCAAATTGAGCCTTATAAAA 59.124 33.333 0.00 0.00 41.23 1.52
357 358 7.382898 GGAACAACCAAATTGAGCCTTATAAA 58.617 34.615 0.00 0.00 41.23 1.40
358 359 6.071051 GGGAACAACCAAATTGAGCCTTATAA 60.071 38.462 0.00 0.00 41.23 0.98
359 360 5.420739 GGGAACAACCAAATTGAGCCTTATA 59.579 40.000 0.00 0.00 41.23 0.98
360 361 4.222810 GGGAACAACCAAATTGAGCCTTAT 59.777 41.667 0.00 0.00 41.23 1.73
361 362 3.576550 GGGAACAACCAAATTGAGCCTTA 59.423 43.478 0.00 0.00 41.23 2.69
362 363 2.368548 GGGAACAACCAAATTGAGCCTT 59.631 45.455 0.00 0.00 41.23 4.35
363 364 1.970640 GGGAACAACCAAATTGAGCCT 59.029 47.619 0.00 0.00 41.23 4.58
364 365 1.001974 GGGGAACAACCAAATTGAGCC 59.998 52.381 0.00 0.00 41.23 4.70
365 366 1.691434 TGGGGAACAACCAAATTGAGC 59.309 47.619 0.00 0.00 41.23 4.26
366 367 3.577848 TGATGGGGAACAACCAAATTGAG 59.422 43.478 0.00 0.00 42.17 3.02
367 368 3.581101 TGATGGGGAACAACCAAATTGA 58.419 40.909 0.00 0.00 42.17 2.57
368 369 4.556592 ATGATGGGGAACAACCAAATTG 57.443 40.909 0.00 0.00 42.17 2.32
369 370 5.725822 ACATATGATGGGGAACAACCAAATT 59.274 36.000 10.38 0.00 42.17 1.82
370 371 5.279685 ACATATGATGGGGAACAACCAAAT 58.720 37.500 10.38 0.00 42.17 2.32
371 372 4.682563 ACATATGATGGGGAACAACCAAA 58.317 39.130 10.38 0.00 42.17 3.28
372 373 4.329638 ACATATGATGGGGAACAACCAA 57.670 40.909 10.38 0.00 42.17 3.67
373 374 4.264128 TGAACATATGATGGGGAACAACCA 60.264 41.667 10.38 0.00 43.22 3.67
374 375 4.277476 TGAACATATGATGGGGAACAACC 58.723 43.478 10.38 0.00 38.08 3.77
375 376 5.192927 TCTGAACATATGATGGGGAACAAC 58.807 41.667 10.38 0.00 33.60 3.32
376 377 5.449297 TCTGAACATATGATGGGGAACAA 57.551 39.130 10.38 0.00 33.60 2.83
377 378 5.651612 ATCTGAACATATGATGGGGAACA 57.348 39.130 10.38 0.00 33.60 3.18
378 379 6.547141 TGAAATCTGAACATATGATGGGGAAC 59.453 38.462 10.38 0.00 33.60 3.62
379 380 6.671605 TGAAATCTGAACATATGATGGGGAA 58.328 36.000 10.38 0.00 33.60 3.97
380 381 6.264771 TGAAATCTGAACATATGATGGGGA 57.735 37.500 10.38 1.59 33.60 4.81
381 382 6.774170 TCTTGAAATCTGAACATATGATGGGG 59.226 38.462 10.38 0.00 33.60 4.96
382 383 7.812690 TCTTGAAATCTGAACATATGATGGG 57.187 36.000 10.38 0.00 33.60 4.00
383 384 7.808381 GCATCTTGAAATCTGAACATATGATGG 59.192 37.037 10.38 0.00 33.60 3.51
384 385 8.349983 TGCATCTTGAAATCTGAACATATGATG 58.650 33.333 10.38 0.00 0.00 3.07
385 386 8.459911 TGCATCTTGAAATCTGAACATATGAT 57.540 30.769 10.38 0.00 0.00 2.45
386 387 7.868906 TGCATCTTGAAATCTGAACATATGA 57.131 32.000 10.38 0.00 0.00 2.15
391 392 9.577110 GATTTAATGCATCTTGAAATCTGAACA 57.423 29.630 19.19 0.00 34.91 3.18
392 393 9.577110 TGATTTAATGCATCTTGAAATCTGAAC 57.423 29.630 23.04 9.35 37.39 3.18
396 397 9.042008 GCAATGATTTAATGCATCTTGAAATCT 57.958 29.630 23.04 13.75 39.81 2.40
397 398 8.822855 TGCAATGATTTAATGCATCTTGAAATC 58.177 29.630 19.43 19.43 44.52 2.17
398 399 8.725405 TGCAATGATTTAATGCATCTTGAAAT 57.275 26.923 0.00 4.19 44.52 2.17
418 419 8.526147 AGTTTTCTCTTAATACTTGCATGCAAT 58.474 29.630 31.96 22.79 35.20 3.56
419 420 7.809331 CAGTTTTCTCTTAATACTTGCATGCAA 59.191 33.333 30.12 30.12 0.00 4.08
420 421 7.174772 TCAGTTTTCTCTTAATACTTGCATGCA 59.825 33.333 18.46 18.46 0.00 3.96
421 422 7.530010 TCAGTTTTCTCTTAATACTTGCATGC 58.470 34.615 11.82 11.82 0.00 4.06
422 423 7.695618 GCTCAGTTTTCTCTTAATACTTGCATG 59.304 37.037 0.00 0.00 0.00 4.06
423 424 7.391554 TGCTCAGTTTTCTCTTAATACTTGCAT 59.608 33.333 0.00 0.00 0.00 3.96
424 425 6.710295 TGCTCAGTTTTCTCTTAATACTTGCA 59.290 34.615 0.00 0.00 0.00 4.08
425 426 7.133891 TGCTCAGTTTTCTCTTAATACTTGC 57.866 36.000 0.00 0.00 0.00 4.01
426 427 9.552114 CATTGCTCAGTTTTCTCTTAATACTTG 57.448 33.333 0.00 0.00 0.00 3.16
427 428 8.239998 GCATTGCTCAGTTTTCTCTTAATACTT 58.760 33.333 0.16 0.00 0.00 2.24
428 429 7.391554 TGCATTGCTCAGTTTTCTCTTAATACT 59.608 33.333 10.49 0.00 0.00 2.12
429 430 7.530010 TGCATTGCTCAGTTTTCTCTTAATAC 58.470 34.615 10.49 0.00 0.00 1.89
430 431 7.686438 TGCATTGCTCAGTTTTCTCTTAATA 57.314 32.000 10.49 0.00 0.00 0.98
431 432 6.579666 TGCATTGCTCAGTTTTCTCTTAAT 57.420 33.333 10.49 0.00 0.00 1.40
432 433 6.384224 CATGCATTGCTCAGTTTTCTCTTAA 58.616 36.000 10.49 0.00 0.00 1.85
433 434 5.946298 CATGCATTGCTCAGTTTTCTCTTA 58.054 37.500 10.49 0.00 0.00 2.10
434 435 4.806330 CATGCATTGCTCAGTTTTCTCTT 58.194 39.130 10.49 0.00 0.00 2.85
435 436 4.436242 CATGCATTGCTCAGTTTTCTCT 57.564 40.909 10.49 0.00 0.00 3.10
499 500 9.768662 ATGCTCTTGTTTTTCTCAACAAAATAT 57.231 25.926 1.03 0.00 44.21 1.28
500 501 9.598517 AATGCTCTTGTTTTTCTCAACAAAATA 57.401 25.926 1.03 0.00 44.21 1.40
501 502 8.496707 AATGCTCTTGTTTTTCTCAACAAAAT 57.503 26.923 1.03 0.00 44.21 1.82
502 503 7.903995 AATGCTCTTGTTTTTCTCAACAAAA 57.096 28.000 1.03 0.00 44.21 2.44
503 504 8.994429 TTAATGCTCTTGTTTTTCTCAACAAA 57.006 26.923 1.03 0.00 44.21 2.83
504 505 9.598517 AATTAATGCTCTTGTTTTTCTCAACAA 57.401 25.926 0.00 0.00 43.00 2.83
505 506 9.033481 CAATTAATGCTCTTGTTTTTCTCAACA 57.967 29.630 0.00 0.00 34.76 3.33
506 507 8.490355 CCAATTAATGCTCTTGTTTTTCTCAAC 58.510 33.333 0.00 0.00 0.00 3.18
507 508 8.420222 TCCAATTAATGCTCTTGTTTTTCTCAA 58.580 29.630 0.00 0.00 0.00 3.02
508 509 7.950512 TCCAATTAATGCTCTTGTTTTTCTCA 58.049 30.769 0.00 0.00 0.00 3.27
509 510 8.992835 ATCCAATTAATGCTCTTGTTTTTCTC 57.007 30.769 0.00 0.00 0.00 2.87
512 513 9.154847 GCTTATCCAATTAATGCTCTTGTTTTT 57.845 29.630 0.00 0.00 0.00 1.94
513 514 8.313292 TGCTTATCCAATTAATGCTCTTGTTTT 58.687 29.630 0.00 0.00 0.00 2.43
514 515 7.839907 TGCTTATCCAATTAATGCTCTTGTTT 58.160 30.769 0.00 0.00 0.00 2.83
515 516 7.408756 TGCTTATCCAATTAATGCTCTTGTT 57.591 32.000 0.00 0.00 0.00 2.83
516 517 7.408756 TTGCTTATCCAATTAATGCTCTTGT 57.591 32.000 0.00 0.00 0.00 3.16
517 518 7.977853 AGTTTGCTTATCCAATTAATGCTCTTG 59.022 33.333 0.00 0.00 0.00 3.02
518 519 8.071177 AGTTTGCTTATCCAATTAATGCTCTT 57.929 30.769 0.00 0.00 0.00 2.85
519 520 7.651027 AGTTTGCTTATCCAATTAATGCTCT 57.349 32.000 0.00 0.00 0.00 4.09
548 549 9.754382 GATAAATGATGAGTGGTGCAATATTTT 57.246 29.630 0.00 0.00 0.00 1.82
549 550 9.139734 AGATAAATGATGAGTGGTGCAATATTT 57.860 29.630 0.00 0.00 0.00 1.40
550 551 8.701908 AGATAAATGATGAGTGGTGCAATATT 57.298 30.769 0.00 0.00 0.00 1.28
551 552 8.701908 AAGATAAATGATGAGTGGTGCAATAT 57.298 30.769 0.00 0.00 0.00 1.28
552 553 9.276590 CTAAGATAAATGATGAGTGGTGCAATA 57.723 33.333 0.00 0.00 0.00 1.90
553 554 7.776969 ACTAAGATAAATGATGAGTGGTGCAAT 59.223 33.333 0.00 0.00 0.00 3.56
554 555 7.112122 ACTAAGATAAATGATGAGTGGTGCAA 58.888 34.615 0.00 0.00 0.00 4.08
555 556 6.653020 ACTAAGATAAATGATGAGTGGTGCA 58.347 36.000 0.00 0.00 0.00 4.57
556 557 7.412853 CAACTAAGATAAATGATGAGTGGTGC 58.587 38.462 0.00 0.00 0.00 5.01
557 558 7.554118 ACCAACTAAGATAAATGATGAGTGGTG 59.446 37.037 0.00 0.00 0.00 4.17
558 559 7.554118 CACCAACTAAGATAAATGATGAGTGGT 59.446 37.037 0.00 0.00 0.00 4.16
559 560 7.770433 TCACCAACTAAGATAAATGATGAGTGG 59.230 37.037 0.00 0.00 0.00 4.00
560 561 8.722480 TCACCAACTAAGATAAATGATGAGTG 57.278 34.615 0.00 0.00 0.00 3.51
561 562 8.762645 TCTCACCAACTAAGATAAATGATGAGT 58.237 33.333 0.00 0.00 32.44 3.41
562 563 9.775854 ATCTCACCAACTAAGATAAATGATGAG 57.224 33.333 0.00 0.00 0.00 2.90
575 576 9.691362 GCTCAATTTAAAAATCTCACCAACTAA 57.309 29.630 0.00 0.00 0.00 2.24
576 577 8.303876 GGCTCAATTTAAAAATCTCACCAACTA 58.696 33.333 0.00 0.00 0.00 2.24
577 578 7.015584 AGGCTCAATTTAAAAATCTCACCAACT 59.984 33.333 0.00 0.00 0.00 3.16
578 579 7.154656 AGGCTCAATTTAAAAATCTCACCAAC 58.845 34.615 0.00 0.00 0.00 3.77
579 580 7.301868 AGGCTCAATTTAAAAATCTCACCAA 57.698 32.000 0.00 0.00 0.00 3.67
580 581 6.916360 AGGCTCAATTTAAAAATCTCACCA 57.084 33.333 0.00 0.00 0.00 4.17
587 588 9.594478 CCGGTTTATAAGGCTCAATTTAAAAAT 57.406 29.630 0.00 0.00 0.00 1.82
588 589 8.804204 TCCGGTTTATAAGGCTCAATTTAAAAA 58.196 29.630 0.00 0.00 0.00 1.94
589 590 8.350852 TCCGGTTTATAAGGCTCAATTTAAAA 57.649 30.769 0.00 0.00 0.00 1.52
590 591 7.941431 TCCGGTTTATAAGGCTCAATTTAAA 57.059 32.000 0.00 0.00 0.00 1.52
591 592 7.941431 TTCCGGTTTATAAGGCTCAATTTAA 57.059 32.000 0.00 0.00 0.00 1.52
592 593 7.067737 CCTTTCCGGTTTATAAGGCTCAATTTA 59.932 37.037 0.00 0.00 31.59 1.40
593 594 6.127451 CCTTTCCGGTTTATAAGGCTCAATTT 60.127 38.462 0.00 0.00 31.59 1.82
594 595 5.359860 CCTTTCCGGTTTATAAGGCTCAATT 59.640 40.000 0.00 0.00 31.59 2.32
595 596 4.887655 CCTTTCCGGTTTATAAGGCTCAAT 59.112 41.667 0.00 0.00 31.59 2.57
596 597 4.019141 TCCTTTCCGGTTTATAAGGCTCAA 60.019 41.667 0.00 0.00 37.62 3.02
597 598 3.520317 TCCTTTCCGGTTTATAAGGCTCA 59.480 43.478 0.00 0.00 37.62 4.26
598 599 4.127907 CTCCTTTCCGGTTTATAAGGCTC 58.872 47.826 0.00 0.00 37.62 4.70
599 600 3.118000 CCTCCTTTCCGGTTTATAAGGCT 60.118 47.826 0.00 0.00 37.62 4.58
600 601 3.118149 TCCTCCTTTCCGGTTTATAAGGC 60.118 47.826 0.00 0.00 37.62 4.35
601 602 4.765813 TCCTCCTTTCCGGTTTATAAGG 57.234 45.455 0.00 8.36 38.78 2.69
602 603 5.742063 ACTTCCTCCTTTCCGGTTTATAAG 58.258 41.667 0.00 0.00 0.00 1.73
603 604 5.767277 ACTTCCTCCTTTCCGGTTTATAA 57.233 39.130 0.00 0.00 0.00 0.98
604 605 5.129320 GGTACTTCCTCCTTTCCGGTTTATA 59.871 44.000 0.00 0.00 0.00 0.98
605 606 4.080695 GGTACTTCCTCCTTTCCGGTTTAT 60.081 45.833 0.00 0.00 0.00 1.40
606 607 3.261643 GGTACTTCCTCCTTTCCGGTTTA 59.738 47.826 0.00 0.00 0.00 2.01
607 608 2.039480 GGTACTTCCTCCTTTCCGGTTT 59.961 50.000 0.00 0.00 0.00 3.27
608 609 1.627329 GGTACTTCCTCCTTTCCGGTT 59.373 52.381 0.00 0.00 0.00 4.44
609 610 1.273759 GGTACTTCCTCCTTTCCGGT 58.726 55.000 0.00 0.00 0.00 5.28
610 611 1.272807 TGGTACTTCCTCCTTTCCGG 58.727 55.000 0.00 0.00 37.07 5.14
611 612 2.236395 ACATGGTACTTCCTCCTTTCCG 59.764 50.000 0.00 0.00 37.07 4.30
612 613 4.683671 GCTACATGGTACTTCCTCCTTTCC 60.684 50.000 0.00 0.00 37.07 3.13
613 614 4.443621 GCTACATGGTACTTCCTCCTTTC 58.556 47.826 0.00 0.00 37.07 2.62
614 615 3.200165 GGCTACATGGTACTTCCTCCTTT 59.800 47.826 0.00 0.00 37.07 3.11
615 616 2.772515 GGCTACATGGTACTTCCTCCTT 59.227 50.000 0.00 0.00 37.07 3.36
616 617 2.292918 TGGCTACATGGTACTTCCTCCT 60.293 50.000 0.00 0.00 37.07 3.69
617 618 2.103263 CTGGCTACATGGTACTTCCTCC 59.897 54.545 0.00 0.00 37.07 4.30
618 619 2.483889 GCTGGCTACATGGTACTTCCTC 60.484 54.545 0.00 0.00 37.07 3.71
619 620 1.486726 GCTGGCTACATGGTACTTCCT 59.513 52.381 0.00 0.00 37.07 3.36
620 621 1.209504 TGCTGGCTACATGGTACTTCC 59.790 52.381 0.00 0.00 0.00 3.46
621 622 2.093447 ACTGCTGGCTACATGGTACTTC 60.093 50.000 0.00 0.00 0.00 3.01
622 623 1.909302 ACTGCTGGCTACATGGTACTT 59.091 47.619 0.00 0.00 0.00 2.24
623 624 1.573108 ACTGCTGGCTACATGGTACT 58.427 50.000 0.00 0.00 0.00 2.73
624 625 2.009774 CAACTGCTGGCTACATGGTAC 58.990 52.381 0.00 0.00 0.00 3.34
625 626 1.905894 TCAACTGCTGGCTACATGGTA 59.094 47.619 0.00 0.00 0.00 3.25
626 627 0.692476 TCAACTGCTGGCTACATGGT 59.308 50.000 0.00 0.00 0.00 3.55
627 628 1.089920 GTCAACTGCTGGCTACATGG 58.910 55.000 0.00 0.00 0.00 3.66
628 629 0.723414 CGTCAACTGCTGGCTACATG 59.277 55.000 0.00 0.00 0.00 3.21
629 630 0.608130 TCGTCAACTGCTGGCTACAT 59.392 50.000 0.00 0.00 0.00 2.29
630 631 0.608130 ATCGTCAACTGCTGGCTACA 59.392 50.000 0.00 0.00 0.00 2.74
631 632 2.159226 ACTATCGTCAACTGCTGGCTAC 60.159 50.000 0.00 0.00 0.00 3.58
632 633 2.100197 ACTATCGTCAACTGCTGGCTA 58.900 47.619 0.00 0.00 0.00 3.93
633 634 0.898320 ACTATCGTCAACTGCTGGCT 59.102 50.000 0.00 0.00 0.00 4.75
634 635 1.726853 AACTATCGTCAACTGCTGGC 58.273 50.000 0.00 0.00 0.00 4.85
635 636 3.617263 GGTTAACTATCGTCAACTGCTGG 59.383 47.826 5.42 0.00 0.00 4.85
636 637 4.242475 TGGTTAACTATCGTCAACTGCTG 58.758 43.478 5.42 0.00 0.00 4.41
637 638 4.530710 TGGTTAACTATCGTCAACTGCT 57.469 40.909 5.42 0.00 0.00 4.24
638 639 5.581085 AGAATGGTTAACTATCGTCAACTGC 59.419 40.000 4.79 0.00 0.00 4.40
639 640 7.009631 CAGAGAATGGTTAACTATCGTCAACTG 59.990 40.741 4.79 9.55 0.00 3.16
640 641 7.036220 CAGAGAATGGTTAACTATCGTCAACT 58.964 38.462 4.79 2.35 0.00 3.16
641 642 7.033791 TCAGAGAATGGTTAACTATCGTCAAC 58.966 38.462 4.79 0.34 0.00 3.18
642 643 7.165460 TCAGAGAATGGTTAACTATCGTCAA 57.835 36.000 4.79 0.00 0.00 3.18
643 644 6.769134 TCAGAGAATGGTTAACTATCGTCA 57.231 37.500 4.79 0.00 0.00 4.35
644 645 7.221067 CACTTCAGAGAATGGTTAACTATCGTC 59.779 40.741 4.79 5.36 0.00 4.20
645 646 7.036220 CACTTCAGAGAATGGTTAACTATCGT 58.964 38.462 4.79 0.00 0.00 3.73
646 647 7.221067 GTCACTTCAGAGAATGGTTAACTATCG 59.779 40.741 4.79 0.00 0.00 2.92
647 648 7.492994 GGTCACTTCAGAGAATGGTTAACTATC 59.507 40.741 4.79 1.83 0.00 2.08
648 649 7.038302 TGGTCACTTCAGAGAATGGTTAACTAT 60.038 37.037 5.42 1.44 0.00 2.12
649 650 6.269077 TGGTCACTTCAGAGAATGGTTAACTA 59.731 38.462 5.42 0.00 0.00 2.24
650 651 5.071788 TGGTCACTTCAGAGAATGGTTAACT 59.928 40.000 5.42 0.00 0.00 2.24
651 652 5.305585 TGGTCACTTCAGAGAATGGTTAAC 58.694 41.667 0.00 0.00 0.00 2.01
652 653 5.560722 TGGTCACTTCAGAGAATGGTTAA 57.439 39.130 0.00 0.00 0.00 2.01
653 654 5.491070 CATGGTCACTTCAGAGAATGGTTA 58.509 41.667 0.00 0.00 0.00 2.85
654 655 4.330250 CATGGTCACTTCAGAGAATGGTT 58.670 43.478 0.00 0.00 0.00 3.67
655 656 3.307975 CCATGGTCACTTCAGAGAATGGT 60.308 47.826 2.57 0.00 0.00 3.55
679 680 2.031919 TGGACAGCCGTTTCGCAT 59.968 55.556 0.00 0.00 36.79 4.73
744 745 5.647658 ACTAGCATAGCAAGTGCAATTTACA 59.352 36.000 6.00 0.00 44.39 2.41
750 751 3.616956 AGACTAGCATAGCAAGTGCAA 57.383 42.857 6.00 0.00 44.39 4.08
751 752 3.264947 CAAGACTAGCATAGCAAGTGCA 58.735 45.455 6.00 0.00 44.39 4.57
752 753 2.611292 CCAAGACTAGCATAGCAAGTGC 59.389 50.000 0.00 0.00 44.39 4.40
757 758 3.879295 GCAATTCCAAGACTAGCATAGCA 59.121 43.478 0.00 0.00 44.39 3.49
758 759 3.879295 TGCAATTCCAAGACTAGCATAGC 59.121 43.478 0.00 0.00 44.39 2.97
759 760 5.355071 TGTTGCAATTCCAAGACTAGCATAG 59.645 40.000 0.59 0.00 46.50 2.23
760 761 5.252547 TGTTGCAATTCCAAGACTAGCATA 58.747 37.500 0.59 0.00 0.00 3.14
761 762 4.081406 TGTTGCAATTCCAAGACTAGCAT 58.919 39.130 0.59 0.00 0.00 3.79
787 788 2.103143 CTGCAGAGTACGAGGCGG 59.897 66.667 8.42 1.15 0.00 6.13
803 804 1.565288 AGAAGACCCGGTAGCTAGTCT 59.435 52.381 0.00 7.39 41.25 3.24
804 805 1.948834 GAGAAGACCCGGTAGCTAGTC 59.051 57.143 0.00 0.00 0.00 2.59
805 806 1.746516 CGAGAAGACCCGGTAGCTAGT 60.747 57.143 0.00 0.00 0.00 2.57
806 807 0.945813 CGAGAAGACCCGGTAGCTAG 59.054 60.000 0.00 0.00 0.00 3.42
807 808 1.099879 GCGAGAAGACCCGGTAGCTA 61.100 60.000 0.00 0.00 0.00 3.32
810 811 1.321074 AAGGCGAGAAGACCCGGTAG 61.321 60.000 0.00 0.00 0.00 3.18
811 812 1.304713 AAGGCGAGAAGACCCGGTA 60.305 57.895 0.00 0.00 0.00 4.02
812 813 2.603776 AAGGCGAGAAGACCCGGT 60.604 61.111 0.00 0.00 0.00 5.28
813 814 2.184579 GAAGGCGAGAAGACCCGG 59.815 66.667 0.00 0.00 0.00 5.73
845 851 0.329261 TCTGCATTCTTGGGACTGGG 59.671 55.000 0.00 0.00 0.00 4.45
848 854 4.796038 CATTTTCTGCATTCTTGGGACT 57.204 40.909 0.00 0.00 0.00 3.85
903 915 2.749621 GGGTGGATTAACACAGAGCTTG 59.250 50.000 0.00 0.00 43.08 4.01
904 916 2.290960 GGGGTGGATTAACACAGAGCTT 60.291 50.000 0.00 0.00 43.08 3.74
912 924 2.241176 GGTGAGATGGGGTGGATTAACA 59.759 50.000 0.00 0.00 0.00 2.41
917 929 1.281925 GGTGGTGAGATGGGGTGGAT 61.282 60.000 0.00 0.00 0.00 3.41
950 962 2.290260 TGTCTTGGTGTATGGCAGAAGG 60.290 50.000 0.00 0.00 0.00 3.46
951 963 3.057969 TGTCTTGGTGTATGGCAGAAG 57.942 47.619 0.00 0.00 0.00 2.85
984 997 1.939785 CATCAGTCGCGCTCGGTAC 60.940 63.158 5.56 0.00 36.13 3.34
985 998 2.407616 CATCAGTCGCGCTCGGTA 59.592 61.111 5.56 0.00 36.13 4.02
986 999 4.498520 CCATCAGTCGCGCTCGGT 62.499 66.667 5.56 0.00 36.13 4.69
1245 1258 1.468908 CCGTTGCAACAGCTTGTGAAA 60.469 47.619 28.01 0.00 0.00 2.69
1249 1262 1.029408 TCACCGTTGCAACAGCTTGT 61.029 50.000 28.01 13.72 0.00 3.16
1250 1263 0.311790 ATCACCGTTGCAACAGCTTG 59.688 50.000 28.01 17.72 0.00 4.01
1264 1277 4.555116 GCTACTAGTACGCTGAAGATCACC 60.555 50.000 13.75 0.00 0.00 4.02
1284 1297 4.152647 CTGGTATACTCCACTGGATGCTA 58.847 47.826 2.25 0.00 33.55 3.49
1285 1298 2.968574 CTGGTATACTCCACTGGATGCT 59.031 50.000 2.25 0.00 33.55 3.79
1286 1299 2.548920 GCTGGTATACTCCACTGGATGC 60.549 54.545 2.25 0.00 33.55 3.91
1312 1329 4.492494 TGCATTGGACAGACATCTACAT 57.508 40.909 0.00 0.00 0.00 2.29
1318 1335 3.276857 GACTGATGCATTGGACAGACAT 58.723 45.455 17.39 0.00 34.88 3.06
1435 1452 7.038048 TGCAACATTTTGACAATAAGTGACAA 58.962 30.769 0.00 0.00 39.62 3.18
1436 1453 6.567959 TGCAACATTTTGACAATAAGTGACA 58.432 32.000 0.00 0.00 34.24 3.58
1437 1454 7.462109 TTGCAACATTTTGACAATAAGTGAC 57.538 32.000 0.00 0.00 34.24 3.67
1438 1455 7.114670 CGATTGCAACATTTTGACAATAAGTGA 59.885 33.333 0.00 0.00 38.48 3.41
1439 1456 7.114670 TCGATTGCAACATTTTGACAATAAGTG 59.885 33.333 0.00 5.86 38.48 3.16
1440 1457 7.114811 GTCGATTGCAACATTTTGACAATAAGT 59.885 33.333 0.00 0.00 38.48 2.24
1441 1458 7.114670 TGTCGATTGCAACATTTTGACAATAAG 59.885 33.333 15.40 9.91 38.48 1.73
1442 1459 6.920210 TGTCGATTGCAACATTTTGACAATAA 59.080 30.769 15.40 0.00 38.48 1.40
1443 1460 6.442112 TGTCGATTGCAACATTTTGACAATA 58.558 32.000 15.40 0.00 38.48 1.90
1444 1461 5.288015 TGTCGATTGCAACATTTTGACAAT 58.712 33.333 15.40 11.50 39.79 2.71
1445 1462 4.676546 TGTCGATTGCAACATTTTGACAA 58.323 34.783 15.40 0.41 34.24 3.18
1480 1507 6.203530 CACTGCATACATCATCGAATAAAGGT 59.796 38.462 0.00 0.00 0.00 3.50
1499 1526 0.250252 TTCTCGGCACAATCACTGCA 60.250 50.000 0.00 0.00 36.27 4.41
1530 1557 3.685272 TGGCGCACGTTTGATTTAGAATA 59.315 39.130 10.83 0.00 0.00 1.75
1548 1575 2.825387 TATGCTTGGCTGCTGGCG 60.825 61.111 12.46 0.39 42.94 5.69
1549 1576 2.001361 CTGTATGCTTGGCTGCTGGC 62.001 60.000 10.40 10.40 40.90 4.85
1628 1688 0.462789 AGGTCGTCCGTGACAAGTTT 59.537 50.000 5.15 0.00 40.72 2.66
2075 2141 1.000896 GGACCCCAAGGACATGGTG 60.001 63.158 0.00 0.00 38.91 4.17
2150 2228 0.888285 TCATGAACACGCACATGCCA 60.888 50.000 0.00 0.00 42.17 4.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.