Multiple sequence alignment - TraesCS2A01G167200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G167200 chr2A 100.000 8496 0 0 1 8496 119328232 119319737 0.000000e+00 15690.0
1 TraesCS2A01G167200 chr2A 86.448 701 66 9 6484 7183 120045237 120044565 0.000000e+00 741.0
2 TraesCS2A01G167200 chr2A 90.530 264 24 1 8233 8496 333747279 333747017 1.760000e-91 348.0
3 TraesCS2A01G167200 chr2A 86.142 267 29 7 7176 7439 120044404 120044143 1.810000e-71 281.0
4 TraesCS2A01G167200 chr2A 92.262 168 12 1 2760 2927 384882434 384882268 3.960000e-58 237.0
5 TraesCS2A01G167200 chr2A 91.279 172 13 2 2760 2930 159873208 159873378 5.130000e-57 233.0
6 TraesCS2A01G167200 chr2A 80.665 331 35 19 2080 2396 725256859 725256544 6.630000e-56 230.0
7 TraesCS2A01G167200 chr2A 90.449 178 12 5 2751 2925 725256685 725256860 6.630000e-56 230.0
8 TraesCS2A01G167200 chr2A 80.363 331 35 20 2080 2395 384882271 384882586 3.090000e-54 224.0
9 TraesCS2A01G167200 chr2A 79.941 339 37 21 2072 2395 744724404 744724082 3.990000e-53 220.0
10 TraesCS2A01G167200 chr2A 89.655 58 6 0 7600 7657 691102460 691102517 3.290000e-09 75.0
11 TraesCS2A01G167200 chr2B 88.503 3914 282 77 3998 7872 168851088 168847304 0.000000e+00 4580.0
12 TraesCS2A01G167200 chr2B 92.333 2113 113 31 1 2078 168854387 168852289 0.000000e+00 2959.0
13 TraesCS2A01G167200 chr2B 93.492 630 37 4 7869 8496 168847230 168846603 0.000000e+00 933.0
14 TraesCS2A01G167200 chr2B 87.019 701 62 10 6484 7183 169857536 169856864 0.000000e+00 763.0
15 TraesCS2A01G167200 chr2B 76.402 767 102 38 3301 4005 168851799 168851050 2.940000e-89 340.0
16 TraesCS2A01G167200 chr2B 86.466 266 30 6 7176 7439 169856519 169856258 3.880000e-73 287.0
17 TraesCS2A01G167200 chr2B 79.134 254 27 13 2933 3183 168852286 168852056 1.480000e-32 152.0
18 TraesCS2A01G167200 chr2D 88.302 701 58 12 6484 7183 118232212 118231535 0.000000e+00 819.0
19 TraesCS2A01G167200 chr2D 86.397 544 44 14 6573 7112 118097367 118096850 1.240000e-157 568.0
20 TraesCS2A01G167200 chr2D 84.328 268 34 6 7176 7440 118096699 118096437 1.090000e-63 255.0
21 TraesCS2A01G167200 chr2D 87.857 140 15 1 7438 7577 118096335 118096198 6.820000e-36 163.0
22 TraesCS2A01G167200 chr2D 86.986 146 13 6 7438 7582 118230955 118230815 8.830000e-35 159.0
23 TraesCS2A01G167200 chr4D 81.644 888 97 24 2081 2923 49803784 49802918 0.000000e+00 676.0
24 TraesCS2A01G167200 chr4D 81.942 587 42 23 2396 2931 296701474 296700901 1.010000e-118 438.0
25 TraesCS2A01G167200 chr4D 89.773 264 26 1 8233 8496 211045474 211045212 3.800000e-88 337.0
26 TraesCS2A01G167200 chr4D 92.683 164 10 2 2760 2923 49803623 49803784 1.430000e-57 235.0
27 TraesCS2A01G167200 chr4D 94.545 55 1 2 7606 7660 423392913 423392965 5.470000e-12 84.2
28 TraesCS2A01G167200 chr6D 81.347 906 87 40 2078 2924 141277160 141278042 0.000000e+00 662.0
29 TraesCS2A01G167200 chr6D 100.000 32 0 0 1574 1605 56279190 56279159 9.210000e-05 60.2
30 TraesCS2A01G167200 chr3D 80.379 897 99 30 2081 2920 448488032 448487156 2.030000e-170 610.0
31 TraesCS2A01G167200 chr3D 79.825 912 99 35 2081 2928 51690916 51690026 3.420000e-163 586.0
32 TraesCS2A01G167200 chr3D 80.087 924 73 36 2081 2928 55352998 55353886 1.230000e-162 584.0
33 TraesCS2A01G167200 chr3D 75.250 400 56 27 233 611 43259948 43260325 5.310000e-32 150.0
34 TraesCS2A01G167200 chr3D 74.590 366 56 25 260 611 43251983 43252325 8.950000e-25 126.0
35 TraesCS2A01G167200 chr3D 80.220 91 16 2 1536 1624 429644589 429644499 5.500000e-07 67.6
36 TraesCS2A01G167200 chr5A 79.848 923 102 34 2069 2927 290263106 290264008 1.580000e-166 597.0
37 TraesCS2A01G167200 chr5A 79.819 332 37 20 2080 2396 536289529 536289845 1.860000e-51 215.0
38 TraesCS2A01G167200 chr4A 82.705 584 63 20 2191 2750 648885637 648886206 1.280000e-132 484.0
39 TraesCS2A01G167200 chr4A 81.416 339 33 20 2072 2394 624982282 624981958 5.090000e-62 250.0
40 TraesCS2A01G167200 chr4A 92.814 167 10 2 2760 2926 554842453 554842289 3.060000e-59 241.0
41 TraesCS2A01G167200 chr4A 92.169 166 12 1 2760 2925 520270321 520270157 5.130000e-57 233.0
42 TraesCS2A01G167200 chr4A 80.781 333 35 18 2076 2395 554842287 554842603 5.130000e-57 233.0
43 TraesCS2A01G167200 chr4A 80.415 337 37 18 2074 2396 559939662 559939983 6.630000e-56 230.0
44 TraesCS2A01G167200 chr4A 79.880 333 34 23 2080 2396 520270158 520270473 6.680000e-51 213.0
45 TraesCS2A01G167200 chr7B 80.752 665 55 31 2293 2909 111974525 111973886 1.300000e-122 451.0
46 TraesCS2A01G167200 chr7B 85.171 263 33 4 2483 2744 389091136 389091393 1.820000e-66 265.0
47 TraesCS2A01G167200 chr7B 79.630 162 28 4 5467 5627 244276452 244276609 2.510000e-20 111.0
48 TraesCS2A01G167200 chr3A 82.136 543 77 17 2390 2923 659954278 659954809 1.680000e-121 448.0
49 TraesCS2A01G167200 chr3A 90.909 264 23 1 8233 8496 83249796 83249534 3.770000e-93 353.0
50 TraesCS2A01G167200 chr3A 82.207 444 47 10 2506 2923 638441357 638441794 3.770000e-93 353.0
51 TraesCS2A01G167200 chr3A 80.909 330 33 19 2081 2396 629034118 629034431 5.130000e-57 233.0
52 TraesCS2A01G167200 chr3A 74.863 366 54 25 260 611 55221955 55222296 1.920000e-26 132.0
53 TraesCS2A01G167200 chr3A 76.531 196 40 6 7909 8101 535545546 535545738 1.510000e-17 102.0
54 TraesCS2A01G167200 chr3A 88.333 60 6 1 7605 7663 113868160 113868101 4.250000e-08 71.3
55 TraesCS2A01G167200 chr3A 90.698 43 3 1 2035 2076 667942759 667942717 1.000000e-03 56.5
56 TraesCS2A01G167200 chr6B 91.034 290 25 1 6888 7177 646200495 646200783 2.880000e-104 390.0
57 TraesCS2A01G167200 chr6B 89.773 264 26 1 8233 8496 47265346 47265608 3.800000e-88 337.0
58 TraesCS2A01G167200 chr6B 84.182 373 28 9 6484 6855 646200153 646200495 4.910000e-87 333.0
59 TraesCS2A01G167200 chr6B 83.221 149 17 7 7438 7582 646201795 646201939 6.920000e-26 130.0
60 TraesCS2A01G167200 chr6B 100.000 32 0 0 1574 1605 126634585 126634554 9.210000e-05 60.2
61 TraesCS2A01G167200 chr5B 89.773 264 26 1 8233 8496 4865108 4865370 3.800000e-88 337.0
62 TraesCS2A01G167200 chr5B 90.038 261 25 1 8236 8496 290449160 290449419 3.800000e-88 337.0
63 TraesCS2A01G167200 chr5B 89.773 264 26 1 8233 8496 474775259 474775521 3.800000e-88 337.0
64 TraesCS2A01G167200 chr5D 90.000 260 25 1 8233 8492 287299104 287298846 1.370000e-87 335.0
65 TraesCS2A01G167200 chr5D 95.833 48 2 0 7613 7660 297996566 297996519 2.540000e-10 78.7
66 TraesCS2A01G167200 chr5D 92.593 54 3 1 7607 7660 102039277 102039225 9.150000e-10 76.8
67 TraesCS2A01G167200 chrUn 79.541 479 53 23 2081 2533 330920302 330920761 4.980000e-77 300.0
68 TraesCS2A01G167200 chrUn 79.079 478 56 22 2081 2533 10095268 10094810 1.080000e-73 289.0
69 TraesCS2A01G167200 chrUn 91.071 56 3 2 7605 7660 171657943 171657890 3.290000e-09 75.0
70 TraesCS2A01G167200 chrUn 91.071 56 4 1 7605 7660 171659983 171659929 3.290000e-09 75.0
71 TraesCS2A01G167200 chr7D 92.683 164 10 2 2760 2923 279205454 279205293 1.430000e-57 235.0
72 TraesCS2A01G167200 chr7D 80.645 124 21 3 1493 1615 63714725 63714846 9.080000e-15 93.5
73 TraesCS2A01G167200 chr7D 95.833 48 2 0 7613 7660 53513827 53513874 2.540000e-10 78.7
74 TraesCS2A01G167200 chr3B 73.815 401 60 29 233 611 67388053 67388430 5.390000e-22 117.0
75 TraesCS2A01G167200 chr3B 73.226 310 47 23 313 611 67385183 67385467 7.070000e-11 80.5
76 TraesCS2A01G167200 chr1D 79.675 123 22 3 1449 1569 3428688 3428567 1.520000e-12 86.1
77 TraesCS2A01G167200 chr7A 75.000 168 35 7 1450 1615 457854960 457854798 4.250000e-08 71.3
78 TraesCS2A01G167200 chr4B 78.070 114 18 5 1519 1625 564875185 564875298 1.980000e-06 65.8
79 TraesCS2A01G167200 chr6A 100.000 29 0 0 1574 1602 70921173 70921145 4.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G167200 chr2A 119319737 119328232 8495 True 15690.000000 15690 100.000000 1 8496 1 chr2A.!!$R1 8495
1 TraesCS2A01G167200 chr2A 120044143 120045237 1094 True 511.000000 741 86.295000 6484 7439 2 chr2A.!!$R6 955
2 TraesCS2A01G167200 chr2B 168846603 168854387 7784 True 1792.800000 4580 85.972800 1 8496 5 chr2B.!!$R1 8495
3 TraesCS2A01G167200 chr2B 169856258 169857536 1278 True 525.000000 763 86.742500 6484 7439 2 chr2B.!!$R2 955
4 TraesCS2A01G167200 chr2D 118230815 118232212 1397 True 489.000000 819 87.644000 6484 7582 2 chr2D.!!$R2 1098
5 TraesCS2A01G167200 chr2D 118096198 118097367 1169 True 328.666667 568 86.194000 6573 7577 3 chr2D.!!$R1 1004
6 TraesCS2A01G167200 chr4D 49802918 49803784 866 True 676.000000 676 81.644000 2081 2923 1 chr4D.!!$R1 842
7 TraesCS2A01G167200 chr4D 296700901 296701474 573 True 438.000000 438 81.942000 2396 2931 1 chr4D.!!$R3 535
8 TraesCS2A01G167200 chr6D 141277160 141278042 882 False 662.000000 662 81.347000 2078 2924 1 chr6D.!!$F1 846
9 TraesCS2A01G167200 chr3D 448487156 448488032 876 True 610.000000 610 80.379000 2081 2920 1 chr3D.!!$R3 839
10 TraesCS2A01G167200 chr3D 51690026 51690916 890 True 586.000000 586 79.825000 2081 2928 1 chr3D.!!$R1 847
11 TraesCS2A01G167200 chr3D 55352998 55353886 888 False 584.000000 584 80.087000 2081 2928 1 chr3D.!!$F3 847
12 TraesCS2A01G167200 chr5A 290263106 290264008 902 False 597.000000 597 79.848000 2069 2927 1 chr5A.!!$F1 858
13 TraesCS2A01G167200 chr4A 648885637 648886206 569 False 484.000000 484 82.705000 2191 2750 1 chr4A.!!$F4 559
14 TraesCS2A01G167200 chr7B 111973886 111974525 639 True 451.000000 451 80.752000 2293 2909 1 chr7B.!!$R1 616
15 TraesCS2A01G167200 chr3A 659954278 659954809 531 False 448.000000 448 82.136000 2390 2923 1 chr3A.!!$F5 533
16 TraesCS2A01G167200 chr6B 646200153 646201939 1786 False 284.333333 390 86.145667 6484 7582 3 chr6B.!!$F2 1098

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
611 612 0.907230 AGGTGAGCTCAACCTCCTCC 60.907 60.0 28.05 17.71 32.98 4.30 F
1423 1441 0.030235 TCGCACATCGATTAGGGACG 59.970 55.0 0.00 0.00 43.16 4.79 F
1514 1532 0.102481 ACGATGTACGATGGGCTGTC 59.898 55.0 0.00 0.00 45.77 3.51 F
2905 3151 0.325765 AGGGCTAGAGTTGAGGGGTC 60.326 60.0 0.00 0.00 0.00 4.46 F
3665 4083 0.108329 AAGTAATGGGCACGACCGAG 60.108 55.0 0.00 0.00 40.62 4.63 F
4330 4789 0.029167 GTAGTCGGCGCTCTAGGAAC 59.971 60.0 7.64 0.00 0.00 3.62 F
4905 5388 0.185175 GGCCCGGGTATCTGGATTTT 59.815 55.0 24.63 0.00 42.08 1.82 F
5211 5713 0.317436 GAACCACAACAAATCGCGCA 60.317 50.0 8.75 0.00 0.00 6.09 F
5264 5766 0.597072 GGCCGATTAGTAGGTCTCCG 59.403 60.0 0.00 0.00 0.00 4.63 F
6735 7249 0.685097 GGAACTACACAGTGCCCAGA 59.315 55.0 0.00 0.00 44.17 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2129 2161 0.178992 TGAAGTTTGGGAGGTGGCAG 60.179 55.000 0.00 0.0 0.00 4.85 R
2816 3052 0.693049 ACTCTCAAAACCGGCCAGAT 59.307 50.000 0.00 0.0 0.00 2.90 R
3078 3324 0.744771 CCTGGCCCGTTAAAGCTCTC 60.745 60.000 0.00 0.0 0.00 3.20 R
4214 4673 0.035439 CCAGTTGGTGAACCGCCTAT 60.035 55.000 0.00 0.0 39.43 2.57 R
5225 5727 0.108615 CCTGTAGCACCAGAACGAGG 60.109 60.000 4.36 0.0 34.23 4.63 R
6101 6608 0.031994 GTTTTTGGGTGAGCGTGCAT 59.968 50.000 0.00 0.0 0.00 3.96 R
6835 7349 1.380302 CCAGGCCATATACCCTGCC 59.620 63.158 5.01 0.0 45.75 4.85 R
6981 7498 1.347707 AGAATGTCCTGGTCGCTGAAA 59.652 47.619 0.00 0.0 0.00 2.69 R
7252 8310 1.276622 AGAGGTACATCCGCCAAGTT 58.723 50.000 3.44 0.0 41.99 2.66 R
8338 10062 0.179062 CCTCTCTTGGATCTTGGCCG 60.179 60.000 0.00 0.0 0.00 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 152 3.149005 TCCTAACACCATGAAACACCC 57.851 47.619 0.00 0.00 0.00 4.61
155 156 1.285641 CACCATGAAACACCCGCAC 59.714 57.895 0.00 0.00 0.00 5.34
224 225 6.748132 TGGTTCAAACTGAATCTTGATTTCC 58.252 36.000 1.66 0.00 38.29 3.13
290 291 1.226746 AGCAACTTGTGAAGGCGTAC 58.773 50.000 0.00 0.00 0.00 3.67
309 310 3.903530 ACTGGTTTTCCCTTGATTCCT 57.096 42.857 0.00 0.00 39.73 3.36
330 331 8.593945 TTCCTATTTTCTAACCAGCATGATTT 57.406 30.769 0.00 0.00 39.69 2.17
334 335 9.727627 CTATTTTCTAACCAGCATGATTTCTTC 57.272 33.333 0.00 0.00 39.69 2.87
604 605 2.167398 TACGGGCAGGTGAGCTCAAC 62.167 60.000 24.71 24.71 33.54 3.18
611 612 0.907230 AGGTGAGCTCAACCTCCTCC 60.907 60.000 28.05 17.71 32.98 4.30
625 626 3.181412 ACCTCCTCCCCATTTGCTAAAAA 60.181 43.478 0.00 0.00 0.00 1.94
662 664 7.961325 AACATTTGTATTAAGGCCACAAAAG 57.039 32.000 18.85 17.02 43.25 2.27
701 703 9.209175 GACTAAATTAGTTGGCACTAGATATGG 57.791 37.037 7.14 0.00 39.59 2.74
807 814 8.021396 GCATACTTGTTAAAAGGAATCGTCTTT 58.979 33.333 0.00 0.00 36.15 2.52
855 862 6.554334 TGTGTTACTATGTTCAAAAGGAGC 57.446 37.500 0.00 0.00 0.00 4.70
856 863 6.296026 TGTGTTACTATGTTCAAAAGGAGCT 58.704 36.000 0.00 0.00 0.00 4.09
868 875 6.469782 TCAAAAGGAGCTGTCTTTGATTTT 57.530 33.333 11.12 0.00 34.99 1.82
918 926 5.217978 TCAGACGGTACCAAATTTAGTGT 57.782 39.130 13.54 0.00 0.00 3.55
996 1004 1.454104 CCAGGGTGCAAGTGGTACA 59.546 57.895 0.00 0.00 33.19 2.90
1213 1223 5.560966 AAACAATGTCGCCTAATAAGTGG 57.439 39.130 0.00 0.00 0.00 4.00
1225 1235 5.931532 CCTAATAAGTGGCAAATGATAGCG 58.068 41.667 0.00 0.00 0.00 4.26
1226 1236 5.700832 CCTAATAAGTGGCAAATGATAGCGA 59.299 40.000 0.00 0.00 0.00 4.93
1228 1238 5.869753 ATAAGTGGCAAATGATAGCGATC 57.130 39.130 0.00 0.00 0.00 3.69
1239 1249 5.888691 ATGATAGCGATCGATGTCTTACT 57.111 39.130 26.53 11.40 34.49 2.24
1240 1250 5.690997 TGATAGCGATCGATGTCTTACTT 57.309 39.130 26.53 1.81 34.49 2.24
1241 1251 6.796705 TGATAGCGATCGATGTCTTACTTA 57.203 37.500 26.53 6.58 34.49 2.24
1242 1252 7.198306 TGATAGCGATCGATGTCTTACTTAA 57.802 36.000 26.53 5.91 34.49 1.85
1300 1310 8.306761 ACCAGCTTTAAAGTTTAATGAATCTGG 58.693 33.333 25.27 25.27 40.28 3.86
1349 1359 3.534357 TTGGAACCCATTGCTTTCCTA 57.466 42.857 12.98 5.69 39.74 2.94
1351 1361 4.379808 TTGGAACCCATTGCTTTCCTAGC 61.380 47.826 12.98 0.00 41.20 3.42
1366 1376 4.902443 TCCTAGCTTTATGAGTGTCTCG 57.098 45.455 0.00 0.00 32.35 4.04
1380 1390 5.189659 AGTGTCTCGGCTTAGTATGATTC 57.810 43.478 0.00 0.00 0.00 2.52
1384 1394 3.005897 TCTCGGCTTAGTATGATTCCAGC 59.994 47.826 0.00 0.00 0.00 4.85
1414 1432 1.196808 GAAAAGGCTTTCGCACATCGA 59.803 47.619 13.76 0.00 46.88 3.59
1423 1441 0.030235 TCGCACATCGATTAGGGACG 59.970 55.000 0.00 0.00 43.16 4.79
1429 1447 2.158813 ACATCGATTAGGGACGGCAAAT 60.159 45.455 0.00 0.00 0.00 2.32
1444 1462 6.147328 GGACGGCAAATCCTAAGAATATGTAC 59.853 42.308 0.00 0.00 33.03 2.90
1489 1507 5.979517 GCCACATAATCTGGAAATAGCAAAC 59.020 40.000 0.00 0.00 0.00 2.93
1493 1511 8.028354 CACATAATCTGGAAATAGCAAACACAA 58.972 33.333 0.00 0.00 0.00 3.33
1496 1514 7.713764 AATCTGGAAATAGCAAACACAAAAC 57.286 32.000 0.00 0.00 0.00 2.43
1510 1528 1.735571 ACAAAACGATGTACGATGGGC 59.264 47.619 0.00 0.00 45.77 5.36
1512 1530 1.651987 AAACGATGTACGATGGGCTG 58.348 50.000 0.00 0.00 45.77 4.85
1513 1531 0.535335 AACGATGTACGATGGGCTGT 59.465 50.000 0.00 0.00 45.77 4.40
1514 1532 0.102481 ACGATGTACGATGGGCTGTC 59.898 55.000 0.00 0.00 45.77 3.51
1524 1542 3.012518 CGATGGGCTGTCTCTTCATTTT 58.987 45.455 0.00 0.00 0.00 1.82
1618 1636 7.834068 AAAGAAGGCAAAGTCTTTCTTTTTC 57.166 32.000 7.50 0.00 44.58 2.29
1640 1658 0.597568 CCACCGCAACATGACATTGT 59.402 50.000 0.00 0.00 0.00 2.71
1644 1662 4.294232 CACCGCAACATGACATTGTTAAA 58.706 39.130 0.00 0.00 37.73 1.52
1650 1668 8.491152 CCGCAACATGACATTGTTAAAATAAAA 58.509 29.630 0.00 0.00 37.73 1.52
1651 1669 9.300441 CGCAACATGACATTGTTAAAATAAAAC 57.700 29.630 0.00 0.00 37.73 2.43
1723 1744 2.165641 CTCACGTGGGACTAATACTGCA 59.834 50.000 10.82 0.00 0.00 4.41
1727 1748 2.427453 CGTGGGACTAATACTGCAGACT 59.573 50.000 23.35 6.45 0.00 3.24
1771 1792 9.280456 ACCTTCTAGATGGTTCTCCTATTTTTA 57.720 33.333 21.63 0.00 35.58 1.52
1818 1841 2.693074 TCTGTTTCCTTGGCCAGTTTTC 59.307 45.455 5.11 0.00 0.00 2.29
1819 1842 2.695147 CTGTTTCCTTGGCCAGTTTTCT 59.305 45.455 5.11 0.00 0.00 2.52
1820 1843 3.888930 CTGTTTCCTTGGCCAGTTTTCTA 59.111 43.478 5.11 0.00 0.00 2.10
1821 1844 4.479158 TGTTTCCTTGGCCAGTTTTCTAT 58.521 39.130 5.11 0.00 0.00 1.98
1907 1936 8.592105 TCAATCTGTGAACATTTTTCAAATCC 57.408 30.769 0.00 0.00 31.51 3.01
1910 1939 8.597662 ATCTGTGAACATTTTTCAAATCCTTG 57.402 30.769 0.00 0.00 0.00 3.61
1966 1995 5.188327 TGCGTGGTCACATTTTTCAAATA 57.812 34.783 1.90 0.00 0.00 1.40
2072 2104 7.673776 GCAACTGTTTTTGAATTCACGAACATT 60.674 33.333 24.74 19.80 33.40 2.71
2074 2106 8.250538 ACTGTTTTTGAATTCACGAACATTTT 57.749 26.923 24.74 15.20 33.40 1.82
2075 2107 8.716909 ACTGTTTTTGAATTCACGAACATTTTT 58.283 25.926 24.74 13.59 33.40 1.94
2129 2161 8.108364 TCAACTCTAGCCCTAGTCTAATATACC 58.892 40.741 2.53 0.00 34.84 2.73
2130 2162 7.834100 ACTCTAGCCCTAGTCTAATATACCT 57.166 40.000 2.53 0.00 34.84 3.08
2131 2163 7.635648 ACTCTAGCCCTAGTCTAATATACCTG 58.364 42.308 2.53 0.00 34.84 4.00
2132 2164 6.424883 TCTAGCCCTAGTCTAATATACCTGC 58.575 44.000 2.53 0.00 34.84 4.85
2133 2165 4.354662 AGCCCTAGTCTAATATACCTGCC 58.645 47.826 0.00 0.00 0.00 4.85
2135 2167 4.081586 GCCCTAGTCTAATATACCTGCCAC 60.082 50.000 0.00 0.00 0.00 5.01
2136 2168 4.466726 CCCTAGTCTAATATACCTGCCACC 59.533 50.000 0.00 0.00 0.00 4.61
2137 2169 5.334421 CCTAGTCTAATATACCTGCCACCT 58.666 45.833 0.00 0.00 0.00 4.00
2141 2173 2.206322 AATATACCTGCCACCTCCCA 57.794 50.000 0.00 0.00 0.00 4.37
2153 2185 3.814316 GCCACCTCCCAAACTTCAATACT 60.814 47.826 0.00 0.00 0.00 2.12
2176 2209 6.071278 ACTGTCTAGTTTACATCCTCAACTCC 60.071 42.308 0.00 0.00 31.66 3.85
2215 2268 2.284699 CCTCCCCTCCCGTTGACT 60.285 66.667 0.00 0.00 0.00 3.41
2234 2287 6.474140 TGACTAGTTTTGACCTGTTGACTA 57.526 37.500 0.00 0.00 0.00 2.59
2305 2392 3.442273 TCACTGGGCGAACAATAAATTCC 59.558 43.478 0.00 0.00 0.00 3.01
2310 2397 5.611374 TGGGCGAACAATAAATTCCAAAAA 58.389 33.333 0.00 0.00 0.00 1.94
2449 2582 4.324402 GTGCATGATGTTCGTTCCAATTTC 59.676 41.667 0.00 0.00 0.00 2.17
2460 2593 5.000591 TCGTTCCAATTTCTAGCATGTTCA 58.999 37.500 0.00 0.00 0.00 3.18
2461 2594 5.471797 TCGTTCCAATTTCTAGCATGTTCAA 59.528 36.000 0.00 0.00 0.00 2.69
2468 2601 8.461222 CCAATTTCTAGCATGTTCAAACATCTA 58.539 33.333 5.41 9.14 46.10 1.98
2616 2778 4.142622 GGACATCATGCACTGAAAAATCGA 60.143 41.667 0.00 0.00 37.44 3.59
2621 2783 3.829886 TGCACTGAAAAATCGACCATC 57.170 42.857 0.00 0.00 0.00 3.51
2638 2800 5.295787 CGACCATCCAAAAAGAATTCGGATA 59.704 40.000 10.41 0.00 34.69 2.59
2642 2805 9.196139 ACCATCCAAAAAGAATTCGGATATTTA 57.804 29.630 10.41 0.00 34.69 1.40
2816 3052 2.475172 GGGGTGGGGAGGGTTGAAA 61.475 63.158 0.00 0.00 0.00 2.69
2868 3114 5.733620 AAACTAGACGGTATTGGAGTTGA 57.266 39.130 0.00 0.00 0.00 3.18
2905 3151 0.325765 AGGGCTAGAGTTGAGGGGTC 60.326 60.000 0.00 0.00 0.00 4.46
2998 3244 9.449550 GCACATTTAAAATTTTAAAAGCAAGCT 57.550 25.926 29.99 15.43 43.43 3.74
3012 3258 4.313277 AGCAAGCTTTTCTCCAAAGAAC 57.687 40.909 0.00 0.00 44.40 3.01
3024 3270 4.635765 TCTCCAAAGAACAACAGACAAGTG 59.364 41.667 0.00 0.00 0.00 3.16
3034 3280 7.339466 AGAACAACAGACAAGTGGTAGAAAAAT 59.661 33.333 0.00 0.00 0.00 1.82
3035 3281 8.514330 AACAACAGACAAGTGGTAGAAAAATA 57.486 30.769 0.00 0.00 0.00 1.40
3036 3282 7.927048 ACAACAGACAAGTGGTAGAAAAATAC 58.073 34.615 0.00 0.00 0.00 1.89
3037 3283 6.780706 ACAGACAAGTGGTAGAAAAATACG 57.219 37.500 0.00 0.00 0.00 3.06
3038 3284 6.518493 ACAGACAAGTGGTAGAAAAATACGA 58.482 36.000 0.00 0.00 0.00 3.43
3039 3285 6.645415 ACAGACAAGTGGTAGAAAAATACGAG 59.355 38.462 0.00 0.00 0.00 4.18
3040 3286 5.638234 AGACAAGTGGTAGAAAAATACGAGC 59.362 40.000 0.00 0.00 0.00 5.03
3041 3287 4.387862 ACAAGTGGTAGAAAAATACGAGCG 59.612 41.667 0.00 0.00 0.00 5.03
3042 3288 4.445452 AGTGGTAGAAAAATACGAGCGA 57.555 40.909 0.00 0.00 0.00 4.93
3043 3289 4.813027 AGTGGTAGAAAAATACGAGCGAA 58.187 39.130 0.00 0.00 0.00 4.70
3044 3290 5.232463 AGTGGTAGAAAAATACGAGCGAAA 58.768 37.500 0.00 0.00 0.00 3.46
3045 3291 5.119743 AGTGGTAGAAAAATACGAGCGAAAC 59.880 40.000 0.00 0.00 0.00 2.78
3046 3292 4.989797 TGGTAGAAAAATACGAGCGAAACA 59.010 37.500 0.00 0.00 0.00 2.83
3047 3293 5.466058 TGGTAGAAAAATACGAGCGAAACAA 59.534 36.000 0.00 0.00 0.00 2.83
3078 3324 1.202114 AGAGAGCAAGCGAGAGTCAAG 59.798 52.381 0.00 0.00 0.00 3.02
3080 3326 1.202114 AGAGCAAGCGAGAGTCAAGAG 59.798 52.381 0.00 0.00 0.00 2.85
3083 3329 1.627879 CAAGCGAGAGTCAAGAGAGC 58.372 55.000 0.00 0.00 0.00 4.09
3084 3330 1.202114 CAAGCGAGAGTCAAGAGAGCT 59.798 52.381 0.00 0.00 34.70 4.09
3088 3334 3.508012 AGCGAGAGTCAAGAGAGCTTTAA 59.492 43.478 0.00 0.00 30.14 1.52
3112 3358 0.982852 CCAGGCCCATGTAGGAGACA 60.983 60.000 0.00 0.00 43.97 3.41
3113 3359 0.911769 CAGGCCCATGTAGGAGACAA 59.088 55.000 0.00 0.00 42.78 3.18
3122 3368 1.229082 TAGGAGACAACCTGGCCGT 60.229 57.895 0.00 0.00 40.81 5.68
3123 3369 0.834687 TAGGAGACAACCTGGCCGTT 60.835 55.000 0.00 0.00 40.81 4.44
3124 3370 1.966451 GGAGACAACCTGGCCGTTG 60.966 63.158 18.66 18.66 46.94 4.10
3125 3371 1.966451 GAGACAACCTGGCCGTTGG 60.966 63.158 22.56 15.84 46.04 3.77
3126 3372 2.203294 GACAACCTGGCCGTTGGT 60.203 61.111 22.56 16.42 46.04 3.67
3127 3373 1.826487 GACAACCTGGCCGTTGGTT 60.826 57.895 22.56 20.47 46.04 3.67
3128 3374 1.792118 GACAACCTGGCCGTTGGTTC 61.792 60.000 22.56 11.62 46.04 3.62
3129 3375 2.593436 AACCTGGCCGTTGGTTCG 60.593 61.111 18.28 0.00 42.26 3.95
3162 3411 0.390735 TAAGCGCCGAGGAAAAGGTC 60.391 55.000 2.29 0.00 0.00 3.85
3164 3413 2.101233 GCGCCGAGGAAAAGGTCTC 61.101 63.158 0.00 0.00 0.00 3.36
3169 3418 0.108756 CGAGGAAAAGGTCTCGGGAC 60.109 60.000 6.97 6.97 46.20 4.46
3171 3420 0.977395 AGGAAAAGGTCTCGGGACAG 59.023 55.000 18.98 0.00 43.77 3.51
3183 3432 2.486966 GGACAGCAAATGAGCCGC 59.513 61.111 0.00 0.00 34.23 6.53
3184 3433 2.042831 GGACAGCAAATGAGCCGCT 61.043 57.895 0.00 0.00 36.10 5.52
3187 3436 3.583383 AGCAAATGAGCCGCTGAC 58.417 55.556 0.00 0.00 33.91 3.51
3188 3437 2.042831 AGCAAATGAGCCGCTGACC 61.043 57.895 0.00 0.00 33.91 4.02
3189 3438 2.042831 GCAAATGAGCCGCTGACCT 61.043 57.895 0.00 0.00 0.00 3.85
3190 3439 1.798735 CAAATGAGCCGCTGACCTG 59.201 57.895 0.00 0.00 0.00 4.00
3191 3440 0.674581 CAAATGAGCCGCTGACCTGA 60.675 55.000 0.00 0.00 0.00 3.86
3192 3441 0.392193 AAATGAGCCGCTGACCTGAG 60.392 55.000 0.00 0.00 0.00 3.35
3193 3442 1.260538 AATGAGCCGCTGACCTGAGA 61.261 55.000 0.00 0.00 0.00 3.27
3194 3443 1.047596 ATGAGCCGCTGACCTGAGAT 61.048 55.000 0.00 0.00 0.00 2.75
3195 3444 1.260538 TGAGCCGCTGACCTGAGATT 61.261 55.000 0.00 0.00 0.00 2.40
3196 3445 0.809241 GAGCCGCTGACCTGAGATTG 60.809 60.000 0.00 0.00 0.00 2.67
3197 3446 1.078848 GCCGCTGACCTGAGATTGT 60.079 57.895 0.00 0.00 0.00 2.71
3198 3447 0.175760 GCCGCTGACCTGAGATTGTA 59.824 55.000 0.00 0.00 0.00 2.41
3199 3448 1.804372 GCCGCTGACCTGAGATTGTAG 60.804 57.143 0.00 0.00 0.00 2.74
3200 3449 1.202463 CCGCTGACCTGAGATTGTAGG 60.202 57.143 0.00 0.00 40.01 3.18
3202 3451 2.093973 CGCTGACCTGAGATTGTAGGTT 60.094 50.000 0.00 0.00 46.92 3.50
3203 3452 3.265791 GCTGACCTGAGATTGTAGGTTG 58.734 50.000 0.00 0.00 46.92 3.77
3204 3453 3.307059 GCTGACCTGAGATTGTAGGTTGT 60.307 47.826 0.00 0.00 46.92 3.32
3205 3454 4.804261 GCTGACCTGAGATTGTAGGTTGTT 60.804 45.833 0.00 0.00 46.92 2.83
3206 3455 5.304686 TGACCTGAGATTGTAGGTTGTTT 57.695 39.130 0.00 0.00 46.92 2.83
3208 3457 6.464222 TGACCTGAGATTGTAGGTTGTTTAG 58.536 40.000 0.00 0.00 46.92 1.85
3211 3553 5.577164 CCTGAGATTGTAGGTTGTTTAGTCG 59.423 44.000 0.00 0.00 0.00 4.18
3216 3558 6.769341 AGATTGTAGGTTGTTTAGTCGGTTTT 59.231 34.615 0.00 0.00 0.00 2.43
3225 3567 4.067192 GTTTAGTCGGTTTTGGCCTTCTA 58.933 43.478 3.32 0.00 0.00 2.10
3234 3576 5.176958 CGGTTTTGGCCTTCTAGTATATTCG 59.823 44.000 3.32 0.00 0.00 3.34
3258 3600 3.840991 GGTTTTCCTGGGTAGTTTTCCT 58.159 45.455 0.00 0.00 36.94 3.36
3259 3601 3.572682 GGTTTTCCTGGGTAGTTTTCCTG 59.427 47.826 0.00 0.00 36.94 3.86
3260 3602 4.466827 GTTTTCCTGGGTAGTTTTCCTGA 58.533 43.478 0.00 0.00 0.00 3.86
3261 3603 3.782656 TTCCTGGGTAGTTTTCCTGAC 57.217 47.619 0.00 0.00 0.00 3.51
3262 3604 1.982958 TCCTGGGTAGTTTTCCTGACC 59.017 52.381 0.00 0.00 0.00 4.02
3265 3607 3.559384 CCTGGGTAGTTTTCCTGACCTTC 60.559 52.174 0.00 0.00 32.24 3.46
3267 3609 4.495565 TGGGTAGTTTTCCTGACCTTCTA 58.504 43.478 0.00 0.00 32.24 2.10
3268 3610 4.530946 TGGGTAGTTTTCCTGACCTTCTAG 59.469 45.833 0.00 0.00 32.24 2.43
3269 3611 4.531339 GGGTAGTTTTCCTGACCTTCTAGT 59.469 45.833 0.00 0.00 32.24 2.57
3270 3612 5.718607 GGGTAGTTTTCCTGACCTTCTAGTA 59.281 44.000 0.00 0.00 32.24 1.82
3272 3614 7.562821 GGGTAGTTTTCCTGACCTTCTAGTATA 59.437 40.741 0.00 0.00 32.24 1.47
3273 3615 8.975295 GGTAGTTTTCCTGACCTTCTAGTATAA 58.025 37.037 0.00 0.00 0.00 0.98
3277 3619 9.327628 GTTTTCCTGACCTTCTAGTATAATTCC 57.672 37.037 0.00 0.00 0.00 3.01
3278 3620 8.618240 TTTCCTGACCTTCTAGTATAATTCCA 57.382 34.615 0.00 0.00 0.00 3.53
3279 3621 7.841282 TCCTGACCTTCTAGTATAATTCCAG 57.159 40.000 0.00 0.00 0.00 3.86
3280 3622 7.592736 TCCTGACCTTCTAGTATAATTCCAGA 58.407 38.462 0.00 0.00 0.00 3.86
3281 3623 8.235230 TCCTGACCTTCTAGTATAATTCCAGAT 58.765 37.037 0.00 0.00 0.00 2.90
3282 3624 9.535170 CCTGACCTTCTAGTATAATTCCAGATA 57.465 37.037 0.00 0.00 0.00 1.98
3286 3628 8.808092 ACCTTCTAGTATAATTCCAGATAGTGC 58.192 37.037 0.00 0.00 0.00 4.40
3287 3629 8.807118 CCTTCTAGTATAATTCCAGATAGTGCA 58.193 37.037 0.00 0.00 0.00 4.57
3293 3635 9.289782 AGTATAATTCCAGATAGTGCATTTTCC 57.710 33.333 0.00 0.00 0.00 3.13
3294 3636 9.289782 GTATAATTCCAGATAGTGCATTTTCCT 57.710 33.333 0.00 0.00 0.00 3.36
3296 3638 6.705863 ATTCCAGATAGTGCATTTTCCTTC 57.294 37.500 0.00 0.00 0.00 3.46
3297 3639 4.526970 TCCAGATAGTGCATTTTCCTTCC 58.473 43.478 0.00 0.00 0.00 3.46
3298 3640 4.228210 TCCAGATAGTGCATTTTCCTTCCT 59.772 41.667 0.00 0.00 0.00 3.36
3407 3796 7.609532 TCTGTGAAAATTTTCCAAACCACATTT 59.390 29.630 24.51 0.00 36.36 2.32
3408 3797 8.115490 TGTGAAAATTTTCCAAACCACATTTT 57.885 26.923 24.51 0.00 36.36 1.82
3409 3798 8.025445 TGTGAAAATTTTCCAAACCACATTTTG 58.975 29.630 24.51 0.00 36.36 2.44
3435 3824 7.714813 GGAATCCAAAAACTTCTTTCAAATCCA 59.285 33.333 0.00 0.00 0.00 3.41
3440 3829 8.510505 CCAAAAACTTCTTTCAAATCCACAAAA 58.489 29.630 0.00 0.00 0.00 2.44
3489 3878 4.685169 TCCAAATCAGCGAACATTTCTC 57.315 40.909 0.00 0.00 0.00 2.87
3490 3879 4.326826 TCCAAATCAGCGAACATTTCTCT 58.673 39.130 0.00 0.00 0.00 3.10
3492 3881 4.437930 CCAAATCAGCGAACATTTCTCTCC 60.438 45.833 0.00 0.00 0.00 3.71
3494 3883 3.685139 TCAGCGAACATTTCTCTCCTT 57.315 42.857 0.00 0.00 0.00 3.36
3495 3884 3.589988 TCAGCGAACATTTCTCTCCTTC 58.410 45.455 0.00 0.00 0.00 3.46
3496 3885 3.006859 TCAGCGAACATTTCTCTCCTTCA 59.993 43.478 0.00 0.00 0.00 3.02
3497 3886 3.937706 CAGCGAACATTTCTCTCCTTCAT 59.062 43.478 0.00 0.00 0.00 2.57
3498 3887 3.937706 AGCGAACATTTCTCTCCTTCATG 59.062 43.478 0.00 0.00 0.00 3.07
3499 3888 3.935203 GCGAACATTTCTCTCCTTCATGA 59.065 43.478 0.00 0.00 0.00 3.07
3636 4045 6.791867 ACTTGATGTAGTAGAATACAGGCA 57.208 37.500 0.00 0.00 46.26 4.75
3661 4079 4.434713 AAATCAAAGTAATGGGCACGAC 57.565 40.909 0.00 0.00 0.00 4.34
3665 4083 0.108329 AAGTAATGGGCACGACCGAG 60.108 55.000 0.00 0.00 40.62 4.63
3666 4084 2.171725 GTAATGGGCACGACCGAGC 61.172 63.158 3.32 3.32 40.62 5.03
3676 4094 1.154016 CGACCGAGCGTCACTGATT 60.154 57.895 0.00 0.00 42.07 2.57
3678 4096 1.268589 CGACCGAGCGTCACTGATTAT 60.269 52.381 0.00 0.00 42.07 1.28
3682 4100 1.802508 CGAGCGTCACTGATTATGCCA 60.803 52.381 0.00 0.00 0.00 4.92
3694 4112 3.442273 TGATTATGCCAAAAAGGACGTCC 59.558 43.478 27.67 27.67 41.22 4.79
3703 4128 4.481463 CAAAAAGGACGTCCGCAAATTAT 58.519 39.130 28.26 5.88 42.08 1.28
3718 4143 5.443170 CGCAAATTATATTTGGCGCTTATGC 60.443 40.000 14.30 2.90 0.00 3.14
3719 4144 5.404968 GCAAATTATATTTGGCGCTTATGCA 59.595 36.000 7.64 0.00 39.64 3.96
3730 4155 2.472488 GCGCTTATGCACCAAATAATGC 59.528 45.455 0.00 0.00 42.40 3.56
3741 4166 5.393243 GCACCAAATAATGCTTTACCGGTAA 60.393 40.000 23.17 23.17 38.84 2.85
3742 4167 6.622549 CACCAAATAATGCTTTACCGGTAAA 58.377 36.000 32.18 32.18 34.28 2.01
3743 4168 7.262048 CACCAAATAATGCTTTACCGGTAAAT 58.738 34.615 33.87 23.48 34.86 1.40
3744 4169 7.221838 CACCAAATAATGCTTTACCGGTAAATG 59.778 37.037 33.87 27.14 34.86 2.32
3745 4170 6.699642 CCAAATAATGCTTTACCGGTAAATGG 59.300 38.462 33.87 29.40 34.86 3.16
3746 4171 3.793797 AATGCTTTACCGGTAAATGGC 57.206 42.857 33.87 31.85 34.86 4.40
3747 4172 2.201921 TGCTTTACCGGTAAATGGCA 57.798 45.000 33.39 33.39 35.35 4.92
3748 4173 2.729194 TGCTTTACCGGTAAATGGCAT 58.271 42.857 33.39 5.44 33.88 4.40
3749 4174 2.425312 TGCTTTACCGGTAAATGGCATG 59.575 45.455 33.39 24.54 33.88 4.06
3750 4175 2.425668 GCTTTACCGGTAAATGGCATGT 59.574 45.455 33.87 0.00 34.86 3.21
3757 4182 2.159254 CGGTAAATGGCATGTTTCCCTG 60.159 50.000 0.00 0.00 0.00 4.45
3878 4335 5.183140 ACAACTATTTTCATAGCCGCAAACT 59.817 36.000 0.00 0.00 36.54 2.66
3891 4348 5.222631 AGCCGCAAACTTTTCTAAAATCTG 58.777 37.500 0.00 0.00 0.00 2.90
3895 4352 7.168469 GCCGCAAACTTTTCTAAAATCTGTAAA 59.832 33.333 0.00 0.00 0.00 2.01
3897 4354 9.015577 CGCAAACTTTTCTAAAATCTGTAAACA 57.984 29.630 0.00 0.00 0.00 2.83
3928 4385 1.255882 ATCCGGCAACAAAATCTGCA 58.744 45.000 0.00 0.00 40.46 4.41
3929 4386 1.035923 TCCGGCAACAAAATCTGCAA 58.964 45.000 0.00 0.00 40.46 4.08
3931 4388 2.159043 TCCGGCAACAAAATCTGCAAAA 60.159 40.909 0.00 0.00 40.46 2.44
4045 4502 6.911484 ACTATTTTCGAATTTGCAACTTCG 57.089 33.333 33.54 33.54 44.18 3.79
4054 4511 6.640499 TCGAATTTGCAACTTCGATTCAATTT 59.360 30.769 36.08 2.63 45.84 1.82
4065 4522 9.533253 AACTTCGATTCAATTTCTGAACATTTT 57.467 25.926 0.00 0.00 46.80 1.82
4097 4554 3.815809 ACTGGGTGTTGATTTTCGAAGA 58.184 40.909 0.00 0.00 0.00 2.87
4098 4555 4.204012 ACTGGGTGTTGATTTTCGAAGAA 58.796 39.130 0.00 0.00 45.90 2.52
4130 4587 5.385617 CAACTGTAGCAGAATACAAGCAAC 58.614 41.667 2.91 0.00 35.32 4.17
4149 4606 7.867445 AGCAACGAAGTACCATTTATTTTTG 57.133 32.000 0.00 0.00 45.00 2.44
4151 4608 7.807907 AGCAACGAAGTACCATTTATTTTTGAG 59.192 33.333 0.00 0.00 45.00 3.02
4152 4609 7.806014 GCAACGAAGTACCATTTATTTTTGAGA 59.194 33.333 0.00 0.00 45.00 3.27
4192 4651 2.866028 GCAGAGCAAGCAGGAACG 59.134 61.111 0.00 0.00 0.00 3.95
4194 4653 1.905922 GCAGAGCAAGCAGGAACGAC 61.906 60.000 0.00 0.00 0.00 4.34
4198 4657 3.777925 CAAGCAGGAACGACGCGG 61.778 66.667 12.47 0.00 0.00 6.46
4213 4672 1.664306 GCGGGCGTTAGTAGGCTAT 59.336 57.895 0.00 0.00 35.54 2.97
4214 4673 0.883833 GCGGGCGTTAGTAGGCTATA 59.116 55.000 0.00 0.00 35.54 1.31
4215 4674 1.475682 GCGGGCGTTAGTAGGCTATAT 59.524 52.381 0.00 0.00 35.54 0.86
4216 4675 2.684881 GCGGGCGTTAGTAGGCTATATA 59.315 50.000 0.00 0.00 35.54 0.86
4233 4692 0.035439 ATAGGCGGTTCACCAACTGG 60.035 55.000 0.00 0.00 39.09 4.00
4237 4696 2.892334 CGGTTCACCAACTGGCACG 61.892 63.158 0.00 0.00 39.32 5.34
4242 4701 1.588674 TCACCAACTGGCACGTTAAG 58.411 50.000 0.00 0.00 39.32 1.85
4257 4716 1.588861 GTTAAGCGTCGAAGAGGATGC 59.411 52.381 1.37 0.00 46.48 3.91
4299 4758 4.717233 TTGGTGCTTATAGTGCCAAATG 57.283 40.909 0.00 0.00 36.42 2.32
4309 4768 7.576856 GCTTATAGTGCCAAATGGTGTTTTACT 60.577 37.037 0.71 0.00 37.57 2.24
4312 4771 3.034635 TGCCAAATGGTGTTTTACTGGT 58.965 40.909 0.71 0.00 37.57 4.00
4315 4774 4.279922 GCCAAATGGTGTTTTACTGGTAGT 59.720 41.667 0.71 0.00 37.57 2.73
4316 4775 5.564063 GCCAAATGGTGTTTTACTGGTAGTC 60.564 44.000 0.71 0.00 37.57 2.59
4318 4777 3.389925 TGGTGTTTTACTGGTAGTCGG 57.610 47.619 0.00 0.00 0.00 4.79
4319 4778 2.071540 GGTGTTTTACTGGTAGTCGGC 58.928 52.381 0.00 0.00 0.00 5.54
4320 4779 1.723003 GTGTTTTACTGGTAGTCGGCG 59.277 52.381 0.00 0.00 0.00 6.46
4322 4781 0.604578 TTTTACTGGTAGTCGGCGCT 59.395 50.000 7.64 5.45 0.00 5.92
4323 4782 0.171903 TTTACTGGTAGTCGGCGCTC 59.828 55.000 7.64 0.00 0.00 5.03
4324 4783 0.679002 TTACTGGTAGTCGGCGCTCT 60.679 55.000 7.64 5.80 0.00 4.09
4325 4784 0.178767 TACTGGTAGTCGGCGCTCTA 59.821 55.000 7.64 4.71 0.00 2.43
4327 4786 1.787057 CTGGTAGTCGGCGCTCTAGG 61.787 65.000 7.64 0.00 0.00 3.02
4329 4788 1.099879 GGTAGTCGGCGCTCTAGGAA 61.100 60.000 7.64 0.00 0.00 3.36
4330 4789 0.029167 GTAGTCGGCGCTCTAGGAAC 59.971 60.000 7.64 0.00 0.00 3.62
4331 4790 1.099879 TAGTCGGCGCTCTAGGAACC 61.100 60.000 7.64 0.00 0.00 3.62
4361 4820 4.891992 TGTTCCCCTAGTTTTCTCTCTG 57.108 45.455 0.00 0.00 0.00 3.35
4372 4831 9.937175 CCTAGTTTTCTCTCTGTTTTACTTTTG 57.063 33.333 0.00 0.00 0.00 2.44
4385 4844 6.370166 TGTTTTACTTTTGTTTCTTTGGCCAG 59.630 34.615 5.11 0.00 0.00 4.85
4392 4851 4.817318 TGTTTCTTTGGCCAGTTTTTCT 57.183 36.364 5.11 0.00 0.00 2.52
4403 4862 6.836242 TGGCCAGTTTTTCTATTGGATTTTT 58.164 32.000 0.00 0.00 32.34 1.94
4527 5008 9.693739 AAAATCCTTAAACACCTTTTCCAAATT 57.306 25.926 0.00 0.00 0.00 1.82
4538 5019 4.583907 CCTTTTCCAAATTTGTGGGCATTT 59.416 37.500 16.73 0.00 39.34 2.32
4539 5020 5.068855 CCTTTTCCAAATTTGTGGGCATTTT 59.931 36.000 16.73 0.00 39.34 1.82
4541 5022 7.201857 CCTTTTCCAAATTTGTGGGCATTTTTA 60.202 33.333 16.73 0.00 39.34 1.52
4542 5023 7.645058 TTTCCAAATTTGTGGGCATTTTTAA 57.355 28.000 16.73 0.00 39.34 1.52
4543 5024 7.645058 TTCCAAATTTGTGGGCATTTTTAAA 57.355 28.000 16.73 0.00 39.34 1.52
4571 5052 7.565450 TCATGAACATCTTTAAAAATGCACG 57.435 32.000 1.29 0.00 0.00 5.34
4664 5146 2.550606 CAATCGGTCGGTTCCTTTCAAA 59.449 45.455 0.00 0.00 0.00 2.69
4675 5157 5.505159 CGGTTCCTTTCAAAAACAGTAGACC 60.505 44.000 0.00 0.00 0.00 3.85
4678 5160 6.445357 TCCTTTCAAAAACAGTAGACCAAC 57.555 37.500 0.00 0.00 0.00 3.77
4694 5176 5.971763 AGACCAACTGTAGCAGAATAGAAG 58.028 41.667 2.91 0.00 35.18 2.85
4699 5181 6.256757 CCAACTGTAGCAGAATAGAAGCTAAC 59.743 42.308 2.91 0.00 41.96 2.34
4718 5200 7.685594 AGCTAACATCAAAATACGAAACTAGC 58.314 34.615 0.00 0.00 0.00 3.42
4757 5240 1.488261 GCCGAGCATACGTTAGTGGC 61.488 60.000 0.00 0.00 33.84 5.01
4759 5242 1.200483 CGAGCATACGTTAGTGGCTG 58.800 55.000 0.00 0.00 40.67 4.85
4760 5243 1.469251 CGAGCATACGTTAGTGGCTGT 60.469 52.381 0.00 0.00 40.67 4.40
4762 5245 0.373716 GCATACGTTAGTGGCTGTGC 59.626 55.000 0.00 0.00 0.00 4.57
4763 5246 2.007049 GCATACGTTAGTGGCTGTGCT 61.007 52.381 0.00 0.00 0.00 4.40
4764 5247 1.927174 CATACGTTAGTGGCTGTGCTC 59.073 52.381 0.00 0.00 0.00 4.26
4765 5248 0.963225 TACGTTAGTGGCTGTGCTCA 59.037 50.000 0.00 0.00 0.00 4.26
4766 5249 0.321671 ACGTTAGTGGCTGTGCTCAT 59.678 50.000 0.00 0.00 0.00 2.90
4767 5250 1.002366 CGTTAGTGGCTGTGCTCATC 58.998 55.000 0.00 0.00 0.00 2.92
4768 5251 1.373570 GTTAGTGGCTGTGCTCATCC 58.626 55.000 1.68 1.68 0.00 3.51
4770 5253 1.960040 TAGTGGCTGTGCTCATCCGG 61.960 60.000 0.00 0.00 33.03 5.14
4771 5254 4.100084 TGGCTGTGCTCATCCGGG 62.100 66.667 0.00 0.00 33.03 5.73
4773 5256 4.783621 GCTGTGCTCATCCGGGCA 62.784 66.667 0.00 0.00 36.01 5.36
4774 5257 2.046023 CTGTGCTCATCCGGGCAA 60.046 61.111 0.00 0.00 40.26 4.52
4775 5258 2.359850 TGTGCTCATCCGGGCAAC 60.360 61.111 0.00 0.00 40.26 4.17
4776 5259 3.499737 GTGCTCATCCGGGCAACG 61.500 66.667 0.00 0.00 40.26 4.10
4777 5260 4.015406 TGCTCATCCGGGCAACGT 62.015 61.111 0.00 0.00 42.24 3.99
4778 5261 3.195698 GCTCATCCGGGCAACGTC 61.196 66.667 0.00 0.00 42.24 4.34
4779 5262 2.511600 CTCATCCGGGCAACGTCC 60.512 66.667 0.00 0.00 42.24 4.79
4780 5263 3.000819 TCATCCGGGCAACGTCCT 61.001 61.111 0.00 0.00 42.24 3.85
4781 5264 2.046314 CATCCGGGCAACGTCCTT 60.046 61.111 0.00 0.00 42.24 3.36
4782 5265 1.219664 CATCCGGGCAACGTCCTTA 59.780 57.895 0.00 0.00 42.24 2.69
4783 5266 0.810031 CATCCGGGCAACGTCCTTAG 60.810 60.000 0.00 0.00 42.24 2.18
4784 5267 2.588856 ATCCGGGCAACGTCCTTAGC 62.589 60.000 0.00 0.00 42.24 3.09
4785 5268 3.186047 CGGGCAACGTCCTTAGCG 61.186 66.667 0.00 0.00 37.93 4.26
4786 5269 3.497031 GGGCAACGTCCTTAGCGC 61.497 66.667 0.00 0.00 37.60 5.92
4787 5270 3.849953 GGCAACGTCCTTAGCGCG 61.850 66.667 0.00 0.00 0.00 6.86
4788 5271 4.500568 GCAACGTCCTTAGCGCGC 62.501 66.667 26.66 26.66 0.00 6.86
4789 5272 3.109547 CAACGTCCTTAGCGCGCA 61.110 61.111 35.10 16.82 0.00 6.09
4790 5273 2.125673 AACGTCCTTAGCGCGCAT 60.126 55.556 35.10 20.44 0.00 4.73
4791 5274 1.740296 AACGTCCTTAGCGCGCATT 60.740 52.632 35.10 16.87 0.00 3.56
4792 5275 0.458889 AACGTCCTTAGCGCGCATTA 60.459 50.000 35.10 15.62 0.00 1.90
4793 5276 0.458889 ACGTCCTTAGCGCGCATTAA 60.459 50.000 35.10 22.11 0.00 1.40
4794 5277 0.648441 CGTCCTTAGCGCGCATTAAA 59.352 50.000 35.10 19.54 0.00 1.52
4795 5278 1.332028 CGTCCTTAGCGCGCATTAAAG 60.332 52.381 35.10 26.63 0.00 1.85
4796 5279 0.655733 TCCTTAGCGCGCATTAAAGC 59.344 50.000 35.10 0.32 0.00 3.51
4797 5280 0.657840 CCTTAGCGCGCATTAAAGCT 59.342 50.000 35.10 12.60 43.07 3.74
4820 5303 0.765510 AAGAGGAGCTTGTTCCCGTT 59.234 50.000 0.00 0.00 38.02 4.44
4821 5304 0.765510 AGAGGAGCTTGTTCCCGTTT 59.234 50.000 0.00 0.00 38.02 3.60
4822 5305 0.875059 GAGGAGCTTGTTCCCGTTTG 59.125 55.000 0.00 0.00 38.02 2.93
4823 5306 0.537371 AGGAGCTTGTTCCCGTTTGG 60.537 55.000 0.00 0.00 38.02 3.28
4824 5307 0.822121 GGAGCTTGTTCCCGTTTGGT 60.822 55.000 0.00 0.00 34.77 3.67
4838 5321 3.374058 CCGTTTGGTGCTTATTCACTAGG 59.626 47.826 0.00 0.00 37.16 3.02
4858 5341 1.830408 CAACTGGGCCGGTCCAAAA 60.830 57.895 31.08 6.28 36.21 2.44
4870 5353 3.003480 CGGTCCAAAAACTCATCTCTCC 58.997 50.000 0.00 0.00 0.00 3.71
4876 5359 4.639310 CCAAAAACTCATCTCTCCCATCAG 59.361 45.833 0.00 0.00 0.00 2.90
4878 5361 2.171568 ACTCATCTCTCCCATCAGCA 57.828 50.000 0.00 0.00 0.00 4.41
4883 5366 3.265221 TCATCTCTCCCATCAGCAGTTTT 59.735 43.478 0.00 0.00 0.00 2.43
4885 5368 2.005451 CTCTCCCATCAGCAGTTTTCG 58.995 52.381 0.00 0.00 0.00 3.46
4888 5371 1.508088 CCATCAGCAGTTTTCGGGC 59.492 57.895 0.00 0.00 0.00 6.13
4890 5373 1.678970 ATCAGCAGTTTTCGGGCCC 60.679 57.895 13.57 13.57 0.00 5.80
4902 5385 2.529389 GGGCCCGGGTATCTGGAT 60.529 66.667 24.63 0.00 42.08 3.41
4903 5386 2.154074 GGGCCCGGGTATCTGGATT 61.154 63.158 24.63 0.00 42.08 3.01
4904 5387 1.716028 GGGCCCGGGTATCTGGATTT 61.716 60.000 24.63 0.00 42.08 2.17
4905 5388 0.185175 GGCCCGGGTATCTGGATTTT 59.815 55.000 24.63 0.00 42.08 1.82
4906 5389 1.318576 GCCCGGGTATCTGGATTTTG 58.681 55.000 24.63 0.00 42.08 2.44
4907 5390 1.409661 GCCCGGGTATCTGGATTTTGT 60.410 52.381 24.63 0.00 42.08 2.83
4908 5391 2.297701 CCCGGGTATCTGGATTTTGTG 58.702 52.381 14.18 0.00 42.08 3.33
4909 5392 2.356741 CCCGGGTATCTGGATTTTGTGT 60.357 50.000 14.18 0.00 42.08 3.72
4910 5393 3.352648 CCGGGTATCTGGATTTTGTGTT 58.647 45.455 0.00 0.00 42.08 3.32
4911 5394 3.761752 CCGGGTATCTGGATTTTGTGTTT 59.238 43.478 0.00 0.00 42.08 2.83
4912 5395 4.142469 CCGGGTATCTGGATTTTGTGTTTC 60.142 45.833 0.00 0.00 42.08 2.78
4913 5396 4.457603 CGGGTATCTGGATTTTGTGTTTCA 59.542 41.667 0.00 0.00 0.00 2.69
4914 5397 5.125417 CGGGTATCTGGATTTTGTGTTTCAT 59.875 40.000 0.00 0.00 0.00 2.57
4915 5398 6.564328 GGGTATCTGGATTTTGTGTTTCATC 58.436 40.000 0.00 0.00 0.00 2.92
4916 5399 6.258160 GGTATCTGGATTTTGTGTTTCATCG 58.742 40.000 0.00 0.00 0.00 3.84
4917 5400 5.964958 ATCTGGATTTTGTGTTTCATCGT 57.035 34.783 0.00 0.00 0.00 3.73
4918 5401 5.766150 TCTGGATTTTGTGTTTCATCGTT 57.234 34.783 0.00 0.00 0.00 3.85
5158 5660 8.474006 AAAAAGTCAACTGTCAATTGGTTAAC 57.526 30.769 5.42 0.00 0.00 2.01
5159 5661 5.767816 AGTCAACTGTCAATTGGTTAACC 57.232 39.130 18.27 18.27 0.00 2.85
5160 5662 4.274950 AGTCAACTGTCAATTGGTTAACCG 59.725 41.667 19.65 5.57 39.43 4.44
5161 5663 4.273969 GTCAACTGTCAATTGGTTAACCGA 59.726 41.667 17.15 17.15 39.43 4.69
5162 5664 4.513692 TCAACTGTCAATTGGTTAACCGAG 59.486 41.667 19.44 7.65 39.43 4.63
5163 5665 3.408634 ACTGTCAATTGGTTAACCGAGG 58.591 45.455 19.44 13.87 39.43 4.63
5170 5672 1.221021 GGTTAACCGAGGGAGCCAG 59.779 63.158 9.34 0.00 0.00 4.85
5204 5706 4.338815 TGGCCGAACCACAACAAA 57.661 50.000 0.00 0.00 46.36 2.83
5205 5707 2.814023 TGGCCGAACCACAACAAAT 58.186 47.368 0.00 0.00 46.36 2.32
5211 5713 0.317436 GAACCACAACAAATCGCGCA 60.317 50.000 8.75 0.00 0.00 6.09
5213 5715 2.074353 CCACAACAAATCGCGCACG 61.074 57.895 8.75 0.00 42.01 5.34
5219 5721 3.788766 AAATCGCGCACGTGAGGC 61.789 61.111 22.23 20.05 41.18 4.70
5225 5727 2.202623 CGCACGTGAGGCCTAGTC 60.203 66.667 22.23 0.00 0.00 2.59
5236 5738 0.971447 GGCCTAGTCCTCGTTCTGGT 60.971 60.000 0.00 0.00 0.00 4.00
5264 5766 0.597072 GGCCGATTAGTAGGTCTCCG 59.403 60.000 0.00 0.00 0.00 4.63
5386 5888 8.895932 AAAAATCTGAAGAAATACGCACATAC 57.104 30.769 0.00 0.00 0.00 2.39
5450 5952 9.571810 TGAAATACATTTTTATGCAAGCTACAG 57.428 29.630 0.00 0.00 0.00 2.74
5524 6026 1.002576 TGCACAGCTCACATCAAAACG 60.003 47.619 0.00 0.00 0.00 3.60
5534 6036 9.767684 CAGCTCACATCAAAACGTATTTTATAA 57.232 29.630 0.00 0.00 35.79 0.98
5674 6176 2.833943 AGCCCTAAAGCCAAAAATCCTG 59.166 45.455 0.00 0.00 0.00 3.86
5678 6180 4.158579 CCCTAAAGCCAAAAATCCTGTCTC 59.841 45.833 0.00 0.00 0.00 3.36
6036 6543 6.721318 TGAAGCTAAGATAACCCTGTCAAAT 58.279 36.000 0.00 0.00 0.00 2.32
6056 6563 7.000472 TCAAATCTTGAATCCTTCAGAACAGT 59.000 34.615 0.00 0.00 41.38 3.55
6101 6608 2.538222 TCCGGTGTTACAGGGATAACA 58.462 47.619 0.00 0.00 41.63 2.41
6139 6646 1.000274 ACCATTCAGAAAAACAGCGCC 60.000 47.619 2.29 0.00 0.00 6.53
6176 6683 5.278709 CCTCGACATTCAGATACAGCATACT 60.279 44.000 0.00 0.00 0.00 2.12
6208 6715 2.897350 CGCATTTCCCCTCGCTCC 60.897 66.667 0.00 0.00 0.00 4.70
6416 6925 4.721274 TCCCCTATTCACACATTCAGATCA 59.279 41.667 0.00 0.00 0.00 2.92
6430 6939 9.499585 CACATTCAGATCAATGCTTTACTAAAG 57.500 33.333 4.39 4.39 37.28 1.85
6482 6991 8.389779 ACACAAAAACAAAGTTCTGGATTTTT 57.610 26.923 0.00 0.00 31.28 1.94
6669 7179 3.131046 CCCTTGCTTTTGTTGTTCTCACT 59.869 43.478 0.00 0.00 0.00 3.41
6678 7188 3.031013 TGTTGTTCTCACTGGAGTCTCA 58.969 45.455 1.47 0.00 42.05 3.27
6735 7249 0.685097 GGAACTACACAGTGCCCAGA 59.315 55.000 0.00 0.00 44.17 3.86
6959 7476 2.233922 CGAGGAAGAGGGTGTACATGTT 59.766 50.000 2.30 0.00 0.00 2.71
6981 7498 4.338879 TCTACGAACTTTGTACCCTAGCT 58.661 43.478 0.00 0.00 0.00 3.32
6986 7503 4.389077 CGAACTTTGTACCCTAGCTTTCAG 59.611 45.833 0.00 0.00 0.00 3.02
7025 7542 1.070134 TCACTCGACCTGGAACAAAGG 59.930 52.381 0.00 0.00 38.70 3.11
7031 7548 2.348411 ACCTGGAACAAAGGTGTCAG 57.652 50.000 0.00 0.00 46.51 3.51
7125 7642 2.226962 ATTTGGTGAAGATGGCAGCT 57.773 45.000 0.00 0.00 34.98 4.24
7252 8310 5.509163 GCCAACTGTACTGACTGTTTAGAGA 60.509 44.000 6.77 0.00 43.03 3.10
7254 8312 6.421202 CCAACTGTACTGACTGTTTAGAGAAC 59.579 42.308 6.77 0.00 43.03 3.01
7353 8411 1.632589 GCCCCTTCTTTGACATTGGT 58.367 50.000 0.00 0.00 0.00 3.67
7399 8932 2.120765 AAAAACGGTGAGTTGGCCC 58.879 52.632 0.00 0.00 43.37 5.80
7495 9137 1.819305 GCAGGGAAGAAGCAGGTTTGA 60.819 52.381 0.00 0.00 0.00 2.69
7592 9238 9.931210 CGGTATGGTTTCATCTTAATTCTTAAC 57.069 33.333 0.00 0.00 34.96 2.01
7599 9245 9.626045 GTTTCATCTTAATTCTTAACAACCCAG 57.374 33.333 0.00 0.00 0.00 4.45
7602 9248 6.817765 TCTTAATTCTTAACAACCCAGCTG 57.182 37.500 6.78 6.78 0.00 4.24
7747 9393 6.318144 AGCATGATGTTTCTCAGATGTTTAGG 59.682 38.462 0.00 0.00 0.00 2.69
7766 9412 2.279842 ACATGCCATGTCCCAAAGC 58.720 52.632 4.03 0.00 39.92 3.51
7767 9413 1.259840 ACATGCCATGTCCCAAAGCC 61.260 55.000 4.03 0.00 39.92 4.35
7805 9451 7.564793 TGATGAGCACCAAAATGTATAGTAGT 58.435 34.615 0.00 0.00 0.00 2.73
7814 9460 5.546621 AAATGTATAGTAGTGGCGTGGAT 57.453 39.130 0.00 0.00 0.00 3.41
7821 9467 2.812011 AGTAGTGGCGTGGATTTGTTTC 59.188 45.455 0.00 0.00 0.00 2.78
7824 9470 0.589223 TGGCGTGGATTTGTTTCGAC 59.411 50.000 0.00 0.00 0.00 4.20
7828 9474 2.159627 GCGTGGATTTGTTTCGACAGAT 59.840 45.455 0.00 0.00 0.00 2.90
7829 9475 3.725010 GCGTGGATTTGTTTCGACAGATC 60.725 47.826 2.47 2.47 32.44 2.75
7862 9508 6.595682 TCTCTCATTCCATAAGACCCAATTC 58.404 40.000 0.00 0.00 0.00 2.17
7863 9509 6.158520 TCTCTCATTCCATAAGACCCAATTCA 59.841 38.462 0.00 0.00 0.00 2.57
7872 9518 7.122055 TCCATAAGACCCAATTCACAAACATAC 59.878 37.037 0.00 0.00 0.00 2.39
7884 9607 1.593006 CAAACATACGCCCATCGAGAC 59.407 52.381 0.00 0.00 41.67 3.36
7892 9615 1.363744 GCCCATCGAGACAAGTCAAG 58.636 55.000 2.72 0.00 0.00 3.02
7902 9625 0.111253 ACAAGTCAAGGGCCTCCAAG 59.889 55.000 6.46 0.00 34.83 3.61
7951 9674 7.448161 TCCACACTCTCAATATGAAACAACATT 59.552 33.333 0.00 0.00 0.00 2.71
7988 9711 2.110578 GGCCAATTCTTGTGCCCTTAT 58.889 47.619 0.00 0.00 39.55 1.73
8037 9761 2.408050 CAACCTCACTTCTCAAGTCGG 58.592 52.381 0.00 0.00 40.46 4.79
8040 9764 1.889829 CCTCACTTCTCAAGTCGGTCT 59.110 52.381 0.00 0.00 40.46 3.85
8043 9767 1.040646 ACTTCTCAAGTCGGTCTGCA 58.959 50.000 0.00 0.00 37.02 4.41
8145 9869 7.385205 GTGTTCATCAAAGTTAAGAGTAGCTCA 59.615 37.037 0.00 0.00 32.06 4.26
8150 9874 7.050970 TCAAAGTTAAGAGTAGCTCACAAGA 57.949 36.000 0.00 0.00 32.06 3.02
8176 9900 0.816825 CTCTGTATGCCAATGCCGCT 60.817 55.000 0.00 0.00 36.33 5.52
8188 9912 1.252904 ATGCCGCTGCTGTCCAAAAT 61.253 50.000 0.70 0.00 38.71 1.82
8223 9947 2.606308 GCATCCTTGGCATCGCTATTTG 60.606 50.000 0.00 0.00 0.00 2.32
8239 9963 5.278266 CGCTATTTGGGTGAACTCAAAGAAA 60.278 40.000 13.52 2.39 36.49 2.52
8249 9973 2.024414 ACTCAAAGAAAGCCGCAAAGT 58.976 42.857 0.00 0.00 0.00 2.66
8250 9974 2.223572 ACTCAAAGAAAGCCGCAAAGTG 60.224 45.455 0.00 0.00 0.00 3.16
8253 9977 1.680338 AAGAAAGCCGCAAAGTGAGT 58.320 45.000 0.00 0.00 0.00 3.41
8266 9990 2.988010 AGTGAGTTGTGAGTGAAGCA 57.012 45.000 0.00 0.00 0.00 3.91
8334 10058 4.038642 AGGAAGGCGAAAGAGACATCTATC 59.961 45.833 0.00 0.00 33.45 2.08
8338 10062 4.037446 AGGCGAAAGAGACATCTATCAGAC 59.963 45.833 0.00 0.00 33.45 3.51
8348 10072 3.006323 ACATCTATCAGACGGCCAAGATC 59.994 47.826 2.24 0.00 0.00 2.75
8349 10073 1.964223 TCTATCAGACGGCCAAGATCC 59.036 52.381 2.24 0.00 0.00 3.36
8350 10074 1.688735 CTATCAGACGGCCAAGATCCA 59.311 52.381 2.24 0.00 0.00 3.41
8367 10091 1.354705 TCCAAGAGAGGAAGACGAGGA 59.645 52.381 0.00 0.00 33.93 3.71
8420 10144 3.537580 AGTAGACGAGCTCCTAGTGAAG 58.462 50.000 8.47 0.00 0.00 3.02
8445 10169 7.015682 AGGACGATGAGATTAAACATAGATGGT 59.984 37.037 0.00 0.00 0.00 3.55
8455 10179 7.504926 TTAAACATAGATGGTGGGAGTACTT 57.495 36.000 0.00 0.00 0.00 2.24
8456 10180 5.615925 AACATAGATGGTGGGAGTACTTC 57.384 43.478 0.00 0.00 0.00 3.01
8457 10181 4.620723 ACATAGATGGTGGGAGTACTTCA 58.379 43.478 2.92 0.00 0.00 3.02
8465 10189 3.007614 GGTGGGAGTACTTCAACAAGCTA 59.992 47.826 11.01 0.00 32.09 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
151 152 2.688507 ACACTTCCTCACTAATGTGCG 58.311 47.619 0.00 0.00 43.49 5.34
155 156 7.921786 TGGATTTAACACTTCCTCACTAATG 57.078 36.000 0.00 0.00 0.00 1.90
290 291 6.857437 AAATAGGAATCAAGGGAAAACCAG 57.143 37.500 0.00 0.00 43.89 4.00
309 310 9.241919 TGAAGAAATCATGCTGGTTAGAAAATA 57.758 29.630 0.00 0.00 31.50 1.40
397 398 3.573967 ACACTTGAATTGGTGGAATGACC 59.426 43.478 0.00 0.00 37.72 4.02
604 605 2.826674 TTTAGCAAATGGGGAGGAGG 57.173 50.000 0.00 0.00 0.00 4.30
662 664 7.113704 ACTAATTTAGTCGTACAACTTGTGC 57.886 36.000 4.57 2.25 32.47 4.57
833 840 6.204882 ACAGCTCCTTTTGAACATAGTAACAC 59.795 38.462 0.00 0.00 0.00 3.32
996 1004 5.643777 GTGTTGCTCACCTCTATACATTTGT 59.356 40.000 2.08 0.00 40.84 2.83
1055 1063 9.161629 CCACAAAACTATGACTATTCATACACA 57.838 33.333 0.00 0.00 42.77 3.72
1213 1223 3.677121 AGACATCGATCGCTATCATTTGC 59.323 43.478 11.09 0.00 31.93 3.68
1218 1228 5.690997 AAGTAAGACATCGATCGCTATCA 57.309 39.130 11.09 0.00 31.93 2.15
1222 1232 5.752892 TCTTAAGTAAGACATCGATCGCT 57.247 39.130 11.09 0.00 37.40 4.93
1225 1235 9.737427 TCTGATTTCTTAAGTAAGACATCGATC 57.263 33.333 16.69 9.62 45.59 3.69
1226 1236 9.743057 CTCTGATTTCTTAAGTAAGACATCGAT 57.257 33.333 16.69 0.00 45.59 3.59
1228 1238 7.976734 ACCTCTGATTTCTTAAGTAAGACATCG 59.023 37.037 16.69 13.09 45.59 3.84
1239 1249 6.127310 GCTGTAGGAGACCTCTGATTTCTTAA 60.127 42.308 0.00 0.00 34.61 1.85
1240 1250 5.361285 GCTGTAGGAGACCTCTGATTTCTTA 59.639 44.000 0.00 0.00 34.61 2.10
1241 1251 4.161377 GCTGTAGGAGACCTCTGATTTCTT 59.839 45.833 0.00 0.00 34.61 2.52
1242 1252 3.704061 GCTGTAGGAGACCTCTGATTTCT 59.296 47.826 0.00 0.00 34.61 2.52
1306 1316 0.179215 GCAACGGAAACATCTGAGCG 60.179 55.000 0.00 0.00 0.00 5.03
1349 1359 1.827969 AGCCGAGACACTCATAAAGCT 59.172 47.619 0.00 0.00 0.00 3.74
1351 1361 5.000012 ACTAAGCCGAGACACTCATAAAG 58.000 43.478 0.00 0.00 0.00 1.85
1357 1367 4.839668 ATCATACTAAGCCGAGACACTC 57.160 45.455 0.00 0.00 0.00 3.51
1366 1376 4.342862 TGAGCTGGAATCATACTAAGCC 57.657 45.455 0.00 0.00 0.00 4.35
1414 1432 3.714798 TCTTAGGATTTGCCGTCCCTAAT 59.285 43.478 0.00 0.00 43.43 1.73
1423 1441 7.907214 ATCGTACATATTCTTAGGATTTGCC 57.093 36.000 0.00 0.00 0.00 4.52
1444 1462 6.809196 GTGGCAGGATTAAGATAAGACTATCG 59.191 42.308 0.00 0.00 39.23 2.92
1466 1484 6.974622 GTGTTTGCTATTTCCAGATTATGTGG 59.025 38.462 1.50 1.50 36.28 4.17
1489 1507 2.475519 GCCCATCGTACATCGTTTTGTG 60.476 50.000 0.00 0.00 40.80 3.33
1493 1511 1.066430 ACAGCCCATCGTACATCGTTT 60.066 47.619 0.00 0.00 40.80 3.60
1496 1514 0.385751 AGACAGCCCATCGTACATCG 59.614 55.000 0.00 0.00 41.41 3.84
1553 1571 9.426534 TCTCTTAATGAAAGATCTCTCACCATA 57.573 33.333 0.00 0.00 43.32 2.74
1554 1572 8.316497 TCTCTTAATGAAAGATCTCTCACCAT 57.684 34.615 0.00 0.00 43.32 3.55
1597 1615 5.907207 AGGAAAAAGAAAGACTTTGCCTTC 58.093 37.500 4.85 3.20 46.55 3.46
1600 1618 4.099419 TGGAGGAAAAAGAAAGACTTTGCC 59.901 41.667 4.85 0.00 46.55 4.52
1601 1619 5.043903 GTGGAGGAAAAAGAAAGACTTTGC 58.956 41.667 4.85 0.00 46.55 3.68
1607 1625 2.227194 GCGGTGGAGGAAAAAGAAAGA 58.773 47.619 0.00 0.00 0.00 2.52
1608 1626 1.953686 TGCGGTGGAGGAAAAAGAAAG 59.046 47.619 0.00 0.00 0.00 2.62
1612 1630 1.028905 TGTTGCGGTGGAGGAAAAAG 58.971 50.000 0.00 0.00 0.00 2.27
1617 1635 1.003839 GTCATGTTGCGGTGGAGGA 60.004 57.895 0.00 0.00 0.00 3.71
1618 1636 0.677731 ATGTCATGTTGCGGTGGAGG 60.678 55.000 0.00 0.00 0.00 4.30
1640 1658 9.530633 AAGGCGTGTACAATTGTTTTATTTTAA 57.469 25.926 17.78 0.00 0.00 1.52
1650 1668 7.119992 TGACAATATTAAGGCGTGTACAATTGT 59.880 33.333 16.68 16.68 37.64 2.71
1651 1669 7.468441 TGACAATATTAAGGCGTGTACAATTG 58.532 34.615 3.24 3.24 0.00 2.32
1652 1670 7.618502 TGACAATATTAAGGCGTGTACAATT 57.381 32.000 0.00 0.00 0.00 2.32
1653 1671 7.618502 TTGACAATATTAAGGCGTGTACAAT 57.381 32.000 0.00 0.00 0.00 2.71
1661 1679 6.959361 AGCACTATTTGACAATATTAAGGCG 58.041 36.000 0.00 0.00 0.00 5.52
1710 1731 5.351740 GGAAAACAGTCTGCAGTATTAGTCC 59.648 44.000 14.67 9.96 0.00 3.85
1711 1732 5.932303 TGGAAAACAGTCTGCAGTATTAGTC 59.068 40.000 14.67 4.69 0.00 2.59
1754 1775 8.422577 AAAACAGCTAAAAATAGGAGAACCAT 57.577 30.769 0.00 0.00 38.94 3.55
1755 1776 7.833285 AAAACAGCTAAAAATAGGAGAACCA 57.167 32.000 0.00 0.00 38.94 3.67
1790 1813 5.011023 ACTGGCCAAGGAAACAGAAAATAAG 59.989 40.000 7.01 0.00 35.08 1.73
1794 1817 2.745968 ACTGGCCAAGGAAACAGAAAA 58.254 42.857 7.01 0.00 35.08 2.29
1800 1823 5.468540 AATAGAAAACTGGCCAAGGAAAC 57.531 39.130 7.01 0.00 0.00 2.78
1888 1917 6.036953 GTGCAAGGATTTGAAAAATGTTCACA 59.963 34.615 0.00 0.00 36.36 3.58
1893 1922 7.628769 AAAAGTGCAAGGATTTGAAAAATGT 57.371 28.000 0.00 0.00 36.36 2.71
1944 1973 3.510388 TTTGAAAAATGTGACCACGCA 57.490 38.095 0.00 0.00 40.86 5.24
1945 1974 5.633182 ACATATTTGAAAAATGTGACCACGC 59.367 36.000 14.06 0.00 32.74 5.34
1966 1995 8.760569 GTCATGGATTTTTAAAAACGTTCACAT 58.239 29.630 15.35 11.27 0.00 3.21
2076 2108 9.015367 GGAGTGTAATATGCACTTCTCTCTATA 57.985 37.037 12.62 0.00 45.99 1.31
2077 2109 7.728083 AGGAGTGTAATATGCACTTCTCTCTAT 59.272 37.037 13.08 0.00 46.70 1.98
2078 2110 7.063593 AGGAGTGTAATATGCACTTCTCTCTA 58.936 38.462 13.08 0.00 46.70 2.43
2079 2111 5.896678 AGGAGTGTAATATGCACTTCTCTCT 59.103 40.000 13.08 6.01 46.70 3.10
2100 2132 2.853707 AGACTAGGGCTAGAGTTGAGGA 59.146 50.000 0.00 0.00 36.97 3.71
2129 2161 0.178992 TGAAGTTTGGGAGGTGGCAG 60.179 55.000 0.00 0.00 0.00 4.85
2130 2162 0.260230 TTGAAGTTTGGGAGGTGGCA 59.740 50.000 0.00 0.00 0.00 4.92
2131 2163 1.632589 ATTGAAGTTTGGGAGGTGGC 58.367 50.000 0.00 0.00 0.00 5.01
2132 2164 3.758554 CAGTATTGAAGTTTGGGAGGTGG 59.241 47.826 0.00 0.00 0.00 4.61
2133 2165 4.398319 ACAGTATTGAAGTTTGGGAGGTG 58.602 43.478 0.00 0.00 0.00 4.00
2135 2167 4.911390 AGACAGTATTGAAGTTTGGGAGG 58.089 43.478 0.00 0.00 0.00 4.30
2136 2168 6.702329 ACTAGACAGTATTGAAGTTTGGGAG 58.298 40.000 0.00 0.00 31.45 4.30
2137 2169 6.681729 ACTAGACAGTATTGAAGTTTGGGA 57.318 37.500 0.00 0.00 31.45 4.37
2153 2185 5.187186 GGGAGTTGAGGATGTAAACTAGACA 59.813 44.000 0.00 0.00 34.37 3.41
2166 2198 1.144913 CCTGGTTTTGGGAGTTGAGGA 59.855 52.381 0.00 0.00 0.00 3.71
2176 2209 0.965439 TGAATTCCGCCTGGTTTTGG 59.035 50.000 2.27 0.00 36.30 3.28
2215 2268 5.881923 ACCTAGTCAACAGGTCAAAACTA 57.118 39.130 0.00 0.00 43.04 2.24
2266 2328 9.150348 CGCCCAGTGAAAAATCTATTTTAATTT 57.850 29.630 1.30 0.00 38.92 1.82
2398 2531 8.867935 CAAACATCGTCCATGCAAAAATAATTA 58.132 29.630 0.00 0.00 35.65 1.40
2460 2593 5.667539 TGCTGAGAGCTACTTAGATGTTT 57.332 39.130 8.48 0.00 42.97 2.83
2461 2594 5.667539 TTGCTGAGAGCTACTTAGATGTT 57.332 39.130 8.48 0.00 42.97 2.71
2616 2778 7.660030 AATATCCGAATTCTTTTTGGATGGT 57.340 32.000 17.37 7.31 39.66 3.55
2770 2968 1.681264 GGTTTTGACCTGTTGACTGGG 59.319 52.381 11.12 2.88 39.04 4.45
2798 3015 1.811025 ATTTCAACCCTCCCCACCCC 61.811 60.000 0.00 0.00 0.00 4.95
2816 3052 0.693049 ACTCTCAAAACCGGCCAGAT 59.307 50.000 0.00 0.00 0.00 2.90
2842 3088 6.448207 ACTCCAATACCGTCTAGTTTACTC 57.552 41.667 0.00 0.00 0.00 2.59
2843 3089 6.435277 TCAACTCCAATACCGTCTAGTTTACT 59.565 38.462 0.00 0.00 0.00 2.24
2868 3114 4.360446 AGCCCTAGTCTAATATACACCCCT 59.640 45.833 0.00 0.00 0.00 4.79
2932 3178 6.259608 TCGCAAATTCAAAAATGTTGGTGAAT 59.740 30.769 0.00 0.00 41.34 2.57
2933 3179 5.582269 TCGCAAATTCAAAAATGTTGGTGAA 59.418 32.000 0.00 0.00 34.68 3.18
2934 3180 5.111989 TCGCAAATTCAAAAATGTTGGTGA 58.888 33.333 0.00 0.00 0.00 4.02
2935 3181 5.401033 TCGCAAATTCAAAAATGTTGGTG 57.599 34.783 0.00 0.00 0.00 4.17
2936 3182 6.616774 AATCGCAAATTCAAAAATGTTGGT 57.383 29.167 0.00 0.00 0.00 3.67
2937 3183 7.911362 AAAATCGCAAATTCAAAAATGTTGG 57.089 28.000 0.00 0.00 0.00 3.77
2981 3227 8.504812 TGGAGAAAAGCTTGCTTTTAAAATTT 57.495 26.923 26.67 9.08 36.75 1.82
2983 3229 8.504812 TTTGGAGAAAAGCTTGCTTTTAAAAT 57.495 26.923 26.67 16.08 36.75 1.82
2986 3232 6.872920 TCTTTGGAGAAAAGCTTGCTTTTAA 58.127 32.000 26.67 17.27 44.30 1.52
2987 3233 6.463995 TCTTTGGAGAAAAGCTTGCTTTTA 57.536 33.333 26.67 13.16 44.30 1.52
2994 3240 5.418840 TCTGTTGTTCTTTGGAGAAAAGCTT 59.581 36.000 0.00 0.00 44.30 3.74
2995 3241 4.949856 TCTGTTGTTCTTTGGAGAAAAGCT 59.050 37.500 0.00 0.00 44.30 3.74
2996 3242 5.037385 GTCTGTTGTTCTTTGGAGAAAAGC 58.963 41.667 0.00 0.00 44.30 3.51
2998 3244 6.208599 ACTTGTCTGTTGTTCTTTGGAGAAAA 59.791 34.615 0.00 0.00 43.21 2.29
3002 3248 4.201950 CCACTTGTCTGTTGTTCTTTGGAG 60.202 45.833 0.00 0.00 0.00 3.86
3005 3251 4.701956 ACCACTTGTCTGTTGTTCTTTG 57.298 40.909 0.00 0.00 0.00 2.77
3012 3258 7.042321 TCGTATTTTTCTACCACTTGTCTGTTG 60.042 37.037 0.00 0.00 0.00 3.33
3024 3270 5.520022 TGTTTCGCTCGTATTTTTCTACC 57.480 39.130 0.00 0.00 0.00 3.18
3034 3280 3.059834 GCTTCGTATTTGTTTCGCTCGTA 59.940 43.478 0.00 0.00 0.00 3.43
3035 3281 2.159881 GCTTCGTATTTGTTTCGCTCGT 60.160 45.455 0.00 0.00 0.00 4.18
3036 3282 2.159894 TGCTTCGTATTTGTTTCGCTCG 60.160 45.455 0.00 0.00 0.00 5.03
3037 3283 3.449322 TGCTTCGTATTTGTTTCGCTC 57.551 42.857 0.00 0.00 0.00 5.03
3038 3284 3.496884 TCTTGCTTCGTATTTGTTTCGCT 59.503 39.130 0.00 0.00 0.00 4.93
3039 3285 3.805823 TCTTGCTTCGTATTTGTTTCGC 58.194 40.909 0.00 0.00 0.00 4.70
3040 3286 5.264060 TCTCTTGCTTCGTATTTGTTTCG 57.736 39.130 0.00 0.00 0.00 3.46
3041 3287 5.082723 GCTCTCTTGCTTCGTATTTGTTTC 58.917 41.667 0.00 0.00 0.00 2.78
3042 3288 4.515191 TGCTCTCTTGCTTCGTATTTGTTT 59.485 37.500 0.00 0.00 0.00 2.83
3043 3289 4.065088 TGCTCTCTTGCTTCGTATTTGTT 58.935 39.130 0.00 0.00 0.00 2.83
3044 3290 3.664107 TGCTCTCTTGCTTCGTATTTGT 58.336 40.909 0.00 0.00 0.00 2.83
3045 3291 4.645956 CTTGCTCTCTTGCTTCGTATTTG 58.354 43.478 0.00 0.00 0.00 2.32
3046 3292 3.126000 GCTTGCTCTCTTGCTTCGTATTT 59.874 43.478 0.00 0.00 0.00 1.40
3047 3293 2.675348 GCTTGCTCTCTTGCTTCGTATT 59.325 45.455 0.00 0.00 0.00 1.89
3078 3324 0.744771 CCTGGCCCGTTAAAGCTCTC 60.745 60.000 0.00 0.00 0.00 3.20
3080 3326 2.407428 GCCTGGCCCGTTAAAGCTC 61.407 63.158 7.66 0.00 0.00 4.09
3104 3350 0.834687 AACGGCCAGGTTGTCTCCTA 60.835 55.000 2.24 0.00 35.87 2.94
3105 3351 2.147387 AACGGCCAGGTTGTCTCCT 61.147 57.895 2.24 0.00 38.51 3.69
3113 3359 4.636435 CCGAACCAACGGCCAGGT 62.636 66.667 2.24 4.31 46.20 4.00
3122 3368 2.485795 GCACCAGTTGCCGAACCAA 61.486 57.895 0.00 0.00 46.63 3.67
3123 3369 2.904866 GCACCAGTTGCCGAACCA 60.905 61.111 0.00 0.00 46.63 3.67
3131 3377 4.818417 CGCTTAACGCACCAGTTG 57.182 55.556 0.00 0.00 39.08 3.16
3162 3411 1.372087 GGCTCATTTGCTGTCCCGAG 61.372 60.000 0.00 0.00 0.00 4.63
3164 3413 2.753966 CGGCTCATTTGCTGTCCCG 61.754 63.158 0.00 0.00 34.86 5.14
3166 3415 2.042831 AGCGGCTCATTTGCTGTCC 61.043 57.895 0.00 0.00 41.12 4.02
3171 3420 2.042831 AGGTCAGCGGCTCATTTGC 61.043 57.895 0.00 0.00 0.00 3.68
3183 3432 4.543590 ACAACCTACAATCTCAGGTCAG 57.456 45.455 0.00 0.00 44.55 3.51
3184 3433 4.974645 AACAACCTACAATCTCAGGTCA 57.025 40.909 0.00 0.00 44.55 4.02
3185 3434 6.465084 ACTAAACAACCTACAATCTCAGGTC 58.535 40.000 0.00 0.00 44.55 3.85
3187 3436 5.577164 CGACTAAACAACCTACAATCTCAGG 59.423 44.000 0.00 0.00 37.97 3.86
3188 3437 5.577164 CCGACTAAACAACCTACAATCTCAG 59.423 44.000 0.00 0.00 0.00 3.35
3189 3438 5.011329 ACCGACTAAACAACCTACAATCTCA 59.989 40.000 0.00 0.00 0.00 3.27
3190 3439 5.476614 ACCGACTAAACAACCTACAATCTC 58.523 41.667 0.00 0.00 0.00 2.75
3191 3440 5.479124 ACCGACTAAACAACCTACAATCT 57.521 39.130 0.00 0.00 0.00 2.40
3192 3441 6.549912 AAACCGACTAAACAACCTACAATC 57.450 37.500 0.00 0.00 0.00 2.67
3193 3442 6.238814 CCAAAACCGACTAAACAACCTACAAT 60.239 38.462 0.00 0.00 0.00 2.71
3194 3443 5.066246 CCAAAACCGACTAAACAACCTACAA 59.934 40.000 0.00 0.00 0.00 2.41
3195 3444 4.575645 CCAAAACCGACTAAACAACCTACA 59.424 41.667 0.00 0.00 0.00 2.74
3196 3445 4.555313 GCCAAAACCGACTAAACAACCTAC 60.555 45.833 0.00 0.00 0.00 3.18
3197 3446 3.565063 GCCAAAACCGACTAAACAACCTA 59.435 43.478 0.00 0.00 0.00 3.08
3198 3447 2.359848 GCCAAAACCGACTAAACAACCT 59.640 45.455 0.00 0.00 0.00 3.50
3199 3448 2.544277 GGCCAAAACCGACTAAACAACC 60.544 50.000 0.00 0.00 0.00 3.77
3200 3449 2.359848 AGGCCAAAACCGACTAAACAAC 59.640 45.455 5.01 0.00 33.69 3.32
3201 3450 2.657143 AGGCCAAAACCGACTAAACAA 58.343 42.857 5.01 0.00 33.69 2.83
3202 3451 2.351706 AGGCCAAAACCGACTAAACA 57.648 45.000 5.01 0.00 33.69 2.83
3203 3452 2.882761 AGAAGGCCAAAACCGACTAAAC 59.117 45.455 5.01 0.00 33.69 2.01
3204 3453 3.217681 AGAAGGCCAAAACCGACTAAA 57.782 42.857 5.01 0.00 33.69 1.85
3205 3454 2.943036 AGAAGGCCAAAACCGACTAA 57.057 45.000 5.01 0.00 33.69 2.24
3206 3455 2.901839 ACTAGAAGGCCAAAACCGACTA 59.098 45.455 5.01 0.00 33.69 2.59
3208 3457 2.180432 ACTAGAAGGCCAAAACCGAC 57.820 50.000 5.01 0.00 33.69 4.79
3211 3553 6.053650 ACGAATATACTAGAAGGCCAAAACC 58.946 40.000 5.01 0.00 0.00 3.27
3216 3558 5.638133 ACCTACGAATATACTAGAAGGCCA 58.362 41.667 5.01 0.00 0.00 5.36
3225 3567 5.664457 ACCCAGGAAAACCTACGAATATACT 59.336 40.000 0.00 0.00 0.00 2.12
3234 3576 4.763793 GGAAAACTACCCAGGAAAACCTAC 59.236 45.833 0.00 0.00 0.00 3.18
3251 3593 9.327628 GGAATTATACTAGAAGGTCAGGAAAAC 57.672 37.037 0.00 0.00 0.00 2.43
3260 3602 8.808092 GCACTATCTGGAATTATACTAGAAGGT 58.192 37.037 0.00 0.00 0.00 3.50
3261 3603 8.807118 TGCACTATCTGGAATTATACTAGAAGG 58.193 37.037 0.00 0.00 0.00 3.46
3267 3609 9.289782 GGAAAATGCACTATCTGGAATTATACT 57.710 33.333 0.00 0.00 0.00 2.12
3268 3610 9.289782 AGGAAAATGCACTATCTGGAATTATAC 57.710 33.333 0.00 0.00 0.00 1.47
3269 3611 9.866655 AAGGAAAATGCACTATCTGGAATTATA 57.133 29.630 0.00 0.00 0.00 0.98
3270 3612 8.773033 AAGGAAAATGCACTATCTGGAATTAT 57.227 30.769 0.00 0.00 0.00 1.28
3272 3614 6.097412 GGAAGGAAAATGCACTATCTGGAATT 59.903 38.462 0.00 0.00 0.00 2.17
3273 3615 5.595952 GGAAGGAAAATGCACTATCTGGAAT 59.404 40.000 0.00 0.00 0.00 3.01
3274 3616 4.949856 GGAAGGAAAATGCACTATCTGGAA 59.050 41.667 0.00 0.00 0.00 3.53
3276 3618 4.530875 AGGAAGGAAAATGCACTATCTGG 58.469 43.478 0.00 0.00 0.00 3.86
3277 3619 6.521151 AAAGGAAGGAAAATGCACTATCTG 57.479 37.500 0.00 0.00 0.00 2.90
3278 3620 7.544804 AAAAAGGAAGGAAAATGCACTATCT 57.455 32.000 0.00 0.00 0.00 1.98
3407 3796 9.108284 GATTTGAAAGAAGTTTTTGGATTCCAA 57.892 29.630 14.24 14.24 42.29 3.53
3408 3797 7.714813 GGATTTGAAAGAAGTTTTTGGATTCCA 59.285 33.333 0.00 0.00 0.00 3.53
3409 3798 7.714813 TGGATTTGAAAGAAGTTTTTGGATTCC 59.285 33.333 0.00 0.00 0.00 3.01
3447 3836 9.973661 TTTGGAAAGAAGTGATTATGGATTCTA 57.026 29.630 0.00 0.00 30.30 2.10
3454 3843 6.690098 CGCTGATTTGGAAAGAAGTGATTATG 59.310 38.462 0.00 0.00 0.00 1.90
3455 3844 6.599244 TCGCTGATTTGGAAAGAAGTGATTAT 59.401 34.615 0.00 0.00 0.00 1.28
3459 3848 3.738982 TCGCTGATTTGGAAAGAAGTGA 58.261 40.909 0.00 0.00 0.00 3.41
3642 4051 2.365582 GGTCGTGCCCATTACTTTGAT 58.634 47.619 0.00 0.00 0.00 2.57
3643 4052 1.816074 GGTCGTGCCCATTACTTTGA 58.184 50.000 0.00 0.00 0.00 2.69
3648 4057 2.171725 GCTCGGTCGTGCCCATTAC 61.172 63.158 6.19 0.00 0.00 1.89
3661 4079 0.855349 GCATAATCAGTGACGCTCGG 59.145 55.000 0.00 0.00 0.00 4.63
3665 4083 3.485947 TTTTGGCATAATCAGTGACGC 57.514 42.857 0.00 0.00 0.00 5.19
3666 4084 4.155826 TCCTTTTTGGCATAATCAGTGACG 59.844 41.667 0.00 0.00 35.26 4.35
3669 4087 4.082787 ACGTCCTTTTTGGCATAATCAGTG 60.083 41.667 0.00 0.00 35.26 3.66
3676 4094 1.444836 CGGACGTCCTTTTTGGCATA 58.555 50.000 30.92 0.00 35.26 3.14
3678 4096 2.548295 GCGGACGTCCTTTTTGGCA 61.548 57.895 30.92 0.00 35.26 4.92
3682 4100 4.776795 ATAATTTGCGGACGTCCTTTTT 57.223 36.364 30.92 18.45 0.00 1.94
3694 4112 5.443170 GCATAAGCGCCAAATATAATTTGCG 60.443 40.000 13.14 13.14 34.54 4.85
3718 4143 4.712122 ACCGGTAAAGCATTATTTGGTG 57.288 40.909 4.49 0.00 35.85 4.17
3719 4144 6.837471 TTTACCGGTAAAGCATTATTTGGT 57.163 33.333 31.25 7.36 37.77 3.67
3730 4155 4.712122 AACATGCCATTTACCGGTAAAG 57.288 40.909 35.62 26.57 38.30 1.85
3748 4173 9.945904 AAACAAAACTAAAAATACAGGGAAACA 57.054 25.926 0.00 0.00 0.00 2.83
3844 4287 9.162764 GCTATGAAAATAGTTGTGGACTTAAGA 57.837 33.333 10.09 0.00 39.86 2.10
3845 4288 8.398665 GGCTATGAAAATAGTTGTGGACTTAAG 58.601 37.037 0.00 0.00 39.86 1.85
3848 4291 5.354234 CGGCTATGAAAATAGTTGTGGACTT 59.646 40.000 0.00 0.00 39.86 3.01
3850 4293 4.495844 GCGGCTATGAAAATAGTTGTGGAC 60.496 45.833 0.00 0.00 0.00 4.02
3851 4294 3.625764 GCGGCTATGAAAATAGTTGTGGA 59.374 43.478 0.00 0.00 0.00 4.02
3852 4295 3.376859 TGCGGCTATGAAAATAGTTGTGG 59.623 43.478 0.00 0.00 0.00 4.17
3853 4296 4.614555 TGCGGCTATGAAAATAGTTGTG 57.385 40.909 0.00 0.00 0.00 3.33
3854 4297 5.183140 AGTTTGCGGCTATGAAAATAGTTGT 59.817 36.000 0.00 0.00 0.00 3.32
3855 4298 5.640732 AGTTTGCGGCTATGAAAATAGTTG 58.359 37.500 0.00 0.00 0.00 3.16
3869 4326 4.982295 ACAGATTTTAGAAAAGTTTGCGGC 59.018 37.500 0.00 0.00 0.00 6.53
3911 4368 1.863267 TTTGCAGATTTTGTTGCCGG 58.137 45.000 0.00 0.00 39.54 6.13
4013 4470 9.868277 TGCAAATTCGAAAATAGTTCCATAAAT 57.132 25.926 0.00 0.00 0.00 1.40
4014 4471 9.698309 TTGCAAATTCGAAAATAGTTCCATAAA 57.302 25.926 0.00 0.00 0.00 1.40
4015 4472 9.134734 GTTGCAAATTCGAAAATAGTTCCATAA 57.865 29.630 0.00 0.00 0.00 1.90
4016 4473 8.519526 AGTTGCAAATTCGAAAATAGTTCCATA 58.480 29.630 0.00 0.00 0.00 2.74
4017 4474 7.378181 AGTTGCAAATTCGAAAATAGTTCCAT 58.622 30.769 0.00 0.00 0.00 3.41
4018 4475 6.744112 AGTTGCAAATTCGAAAATAGTTCCA 58.256 32.000 0.00 0.00 0.00 3.53
4019 4476 7.637709 AAGTTGCAAATTCGAAAATAGTTCC 57.362 32.000 6.26 0.00 0.00 3.62
4035 4492 6.070897 TCAGAAATTGAATCGAAGTTGCAA 57.929 33.333 0.00 0.00 31.34 4.08
4071 4528 7.662258 TCTTCGAAAATCAACACCCAGTTTATA 59.338 33.333 0.00 0.00 38.74 0.98
4087 4544 5.765182 AGTTGGTCTCATGTTCTTCGAAAAT 59.235 36.000 0.00 0.00 0.00 1.82
4097 4554 3.324846 TCTGCTACAGTTGGTCTCATGTT 59.675 43.478 0.00 0.00 32.61 2.71
4098 4555 2.899900 TCTGCTACAGTTGGTCTCATGT 59.100 45.455 0.00 0.00 32.61 3.21
4194 4653 2.138656 ATAGCCTACTAACGCCCGCG 62.139 60.000 7.69 7.69 46.03 6.46
4198 4657 3.243002 CGCCTATATAGCCTACTAACGCC 60.243 52.174 4.04 0.00 30.45 5.68
4201 4660 5.416952 TGAACCGCCTATATAGCCTACTAAC 59.583 44.000 4.04 0.00 30.45 2.34
4213 4672 1.208535 CCAGTTGGTGAACCGCCTATA 59.791 52.381 0.00 0.00 39.43 1.31
4214 4673 0.035439 CCAGTTGGTGAACCGCCTAT 60.035 55.000 0.00 0.00 39.43 2.57
4215 4674 1.373435 CCAGTTGGTGAACCGCCTA 59.627 57.895 0.00 0.00 39.43 3.93
4216 4675 2.113139 CCAGTTGGTGAACCGCCT 59.887 61.111 0.00 0.00 39.43 5.52
4219 4678 2.892334 CGTGCCAGTTGGTGAACCG 61.892 63.158 0.00 0.00 39.43 4.44
4237 4696 1.588861 GCATCCTCTTCGACGCTTAAC 59.411 52.381 0.00 0.00 0.00 2.01
4242 4701 1.590259 GAGGCATCCTCTTCGACGC 60.590 63.158 5.65 0.00 46.41 5.19
4257 4716 0.757935 TAGGATTTCCCGTCCCGAGG 60.758 60.000 0.00 0.00 40.87 4.63
4266 4725 7.004691 ACTATAAGCACCAAATAGGATTTCCC 58.995 38.462 0.00 0.00 41.22 3.97
4268 4727 7.363431 GCACTATAAGCACCAAATAGGATTTC 58.637 38.462 0.00 0.00 41.22 2.17
4299 4758 2.071540 GCCGACTACCAGTAAAACACC 58.928 52.381 0.00 0.00 0.00 4.16
4309 4768 1.822613 CCTAGAGCGCCGACTACCA 60.823 63.158 2.29 0.00 0.00 3.25
4312 4771 1.099879 GGTTCCTAGAGCGCCGACTA 61.100 60.000 2.29 5.05 0.00 2.59
4315 4774 1.664321 GAAGGTTCCTAGAGCGCCGA 61.664 60.000 2.29 0.00 0.00 5.54
4316 4775 1.227002 GAAGGTTCCTAGAGCGCCG 60.227 63.158 2.29 0.00 0.00 6.46
4318 4777 2.299521 TCTAGAAGGTTCCTAGAGCGC 58.700 52.381 0.00 0.00 38.08 5.92
4319 4778 4.339814 ACATTCTAGAAGGTTCCTAGAGCG 59.660 45.833 16.72 0.00 42.27 5.03
4320 4779 5.862678 ACATTCTAGAAGGTTCCTAGAGC 57.137 43.478 16.72 0.00 42.27 4.09
4329 4788 4.961585 ACTAGGGGAACATTCTAGAAGGT 58.038 43.478 16.72 16.72 36.84 3.50
4330 4789 5.959583 AACTAGGGGAACATTCTAGAAGG 57.040 43.478 15.32 15.32 35.66 3.46
4331 4790 7.625469 AGAAAACTAGGGGAACATTCTAGAAG 58.375 38.462 11.53 5.93 35.66 2.85
4361 4820 6.370442 ACTGGCCAAAGAAACAAAAGTAAAAC 59.630 34.615 7.01 0.00 0.00 2.43
4372 4831 6.202762 CCAATAGAAAAACTGGCCAAAGAAAC 59.797 38.462 7.01 0.00 0.00 2.78
4377 4836 6.432403 AATCCAATAGAAAAACTGGCCAAA 57.568 33.333 7.01 0.00 0.00 3.28
4378 4837 6.432403 AAATCCAATAGAAAAACTGGCCAA 57.568 33.333 7.01 0.00 0.00 4.52
4508 4989 6.599638 CCCACAAATTTGGAAAAGGTGTTTAA 59.400 34.615 21.74 0.00 39.24 1.52
4515 4996 3.205784 TGCCCACAAATTTGGAAAAGG 57.794 42.857 21.74 14.39 39.24 3.11
4520 5001 7.645058 TTTTAAAAATGCCCACAAATTTGGA 57.355 28.000 21.74 0.00 39.24 3.53
4527 5008 8.455903 TCATGAAATTTTAAAAATGCCCACAA 57.544 26.923 4.44 0.00 0.00 3.33
4631 5112 6.074544 ACCGACCGATTGTTCAAATTAAAA 57.925 33.333 0.00 0.00 0.00 1.52
4632 5113 5.692613 ACCGACCGATTGTTCAAATTAAA 57.307 34.783 0.00 0.00 0.00 1.52
4633 5114 5.335035 GGAACCGACCGATTGTTCAAATTAA 60.335 40.000 10.48 0.00 40.04 1.40
4634 5115 4.154556 GGAACCGACCGATTGTTCAAATTA 59.845 41.667 10.48 0.00 40.04 1.40
4635 5116 3.057806 GGAACCGACCGATTGTTCAAATT 60.058 43.478 10.48 0.00 40.04 1.82
4646 5127 2.328819 TTTTGAAAGGAACCGACCGA 57.671 45.000 0.00 0.00 34.73 4.69
4675 5157 6.813649 TGTTAGCTTCTATTCTGCTACAGTTG 59.186 38.462 0.00 0.00 38.77 3.16
4678 5160 7.205992 TGATGTTAGCTTCTATTCTGCTACAG 58.794 38.462 0.00 0.00 38.77 2.74
4684 5166 9.855361 CGTATTTTGATGTTAGCTTCTATTCTG 57.145 33.333 0.00 0.00 0.00 3.02
4694 5176 6.623743 CGCTAGTTTCGTATTTTGATGTTAGC 59.376 38.462 0.00 0.00 0.00 3.09
4699 5181 4.785341 GCCCGCTAGTTTCGTATTTTGATG 60.785 45.833 0.00 0.00 0.00 3.07
4736 5218 1.478137 CACTAACGTATGCTCGGCTC 58.522 55.000 0.00 0.00 34.94 4.70
4741 5223 1.927174 CACAGCCACTAACGTATGCTC 59.073 52.381 0.00 0.00 30.61 4.26
4746 5229 0.963225 TGAGCACAGCCACTAACGTA 59.037 50.000 0.00 0.00 0.00 3.57
4757 5240 2.046023 TTGCCCGGATGAGCACAG 60.046 61.111 0.73 0.00 39.10 3.66
4759 5242 3.499737 CGTTGCCCGGATGAGCAC 61.500 66.667 0.73 0.00 39.10 4.40
4760 5243 3.950794 GACGTTGCCCGGATGAGCA 62.951 63.158 0.73 0.00 42.24 4.26
4762 5245 2.511600 GGACGTTGCCCGGATGAG 60.512 66.667 0.73 0.00 42.24 2.90
4763 5246 1.259142 TAAGGACGTTGCCCGGATGA 61.259 55.000 0.73 0.00 42.24 2.92
4764 5247 0.810031 CTAAGGACGTTGCCCGGATG 60.810 60.000 0.73 0.00 42.24 3.51
4765 5248 1.520666 CTAAGGACGTTGCCCGGAT 59.479 57.895 0.73 0.00 42.24 4.18
4766 5249 2.975536 CTAAGGACGTTGCCCGGA 59.024 61.111 0.73 0.00 42.24 5.14
4767 5250 2.818274 GCTAAGGACGTTGCCCGG 60.818 66.667 0.00 0.00 42.24 5.73
4768 5251 3.186047 CGCTAAGGACGTTGCCCG 61.186 66.667 0.00 0.00 44.03 6.13
4770 5253 3.849953 CGCGCTAAGGACGTTGCC 61.850 66.667 5.56 0.00 0.00 4.52
4771 5254 4.500568 GCGCGCTAAGGACGTTGC 62.501 66.667 26.67 0.00 0.00 4.17
4772 5255 1.966493 AATGCGCGCTAAGGACGTTG 61.966 55.000 33.29 0.00 0.00 4.10
4773 5256 0.458889 TAATGCGCGCTAAGGACGTT 60.459 50.000 33.29 11.29 0.00 3.99
4774 5257 0.458889 TTAATGCGCGCTAAGGACGT 60.459 50.000 33.29 10.30 0.00 4.34
4775 5258 0.648441 TTTAATGCGCGCTAAGGACG 59.352 50.000 33.29 0.00 0.00 4.79
4776 5259 1.594760 GCTTTAATGCGCGCTAAGGAC 60.595 52.381 33.29 14.73 0.00 3.85
4777 5260 0.655733 GCTTTAATGCGCGCTAAGGA 59.344 50.000 33.29 12.29 0.00 3.36
4778 5261 0.657840 AGCTTTAATGCGCGCTAAGG 59.342 50.000 33.29 22.83 38.13 2.69
4779 5262 2.223021 TGAAGCTTTAATGCGCGCTAAG 60.223 45.455 33.29 26.47 38.13 2.18
4780 5263 1.735018 TGAAGCTTTAATGCGCGCTAA 59.265 42.857 33.29 20.29 38.13 3.09
4781 5264 1.364721 TGAAGCTTTAATGCGCGCTA 58.635 45.000 33.29 19.04 38.13 4.26
4782 5265 0.521291 TTGAAGCTTTAATGCGCGCT 59.479 45.000 33.29 16.10 38.13 5.92
4783 5266 1.318491 CTTTGAAGCTTTAATGCGCGC 59.682 47.619 27.26 27.26 38.13 6.86
4784 5267 2.842485 CTCTTTGAAGCTTTAATGCGCG 59.158 45.455 0.00 0.00 38.13 6.86
4785 5268 3.119849 TCCTCTTTGAAGCTTTAATGCGC 60.120 43.478 4.30 0.00 38.13 6.09
4786 5269 4.656041 CTCCTCTTTGAAGCTTTAATGCG 58.344 43.478 4.30 2.55 38.13 4.73
4787 5270 4.157472 AGCTCCTCTTTGAAGCTTTAATGC 59.843 41.667 4.30 5.22 31.02 3.56
4788 5271 5.893897 AGCTCCTCTTTGAAGCTTTAATG 57.106 39.130 4.30 7.44 31.02 1.90
4789 5272 5.772169 ACAAGCTCCTCTTTGAAGCTTTAAT 59.228 36.000 4.30 0.00 42.97 1.40
4790 5273 5.133221 ACAAGCTCCTCTTTGAAGCTTTAA 58.867 37.500 0.00 0.00 42.97 1.52
4791 5274 4.718961 ACAAGCTCCTCTTTGAAGCTTTA 58.281 39.130 0.00 0.00 42.97 1.85
4792 5275 3.560105 ACAAGCTCCTCTTTGAAGCTTT 58.440 40.909 0.00 0.00 42.97 3.51
4793 5276 3.220674 ACAAGCTCCTCTTTGAAGCTT 57.779 42.857 0.00 0.00 45.31 3.74
4794 5277 2.947127 ACAAGCTCCTCTTTGAAGCT 57.053 45.000 0.00 0.00 37.45 3.74
4795 5278 2.227626 GGAACAAGCTCCTCTTTGAAGC 59.772 50.000 0.00 0.00 31.27 3.86
4796 5279 2.816672 GGGAACAAGCTCCTCTTTGAAG 59.183 50.000 0.00 0.00 35.63 3.02
4797 5280 2.810400 CGGGAACAAGCTCCTCTTTGAA 60.810 50.000 0.00 0.00 35.63 2.69
4820 5303 2.307392 TGCCCTAGTGAATAAGCACCAA 59.693 45.455 0.00 0.00 39.59 3.67
4821 5304 1.912731 TGCCCTAGTGAATAAGCACCA 59.087 47.619 0.00 0.00 39.59 4.17
4822 5305 2.683362 GTTGCCCTAGTGAATAAGCACC 59.317 50.000 0.00 0.00 39.59 5.01
4823 5306 3.375299 CAGTTGCCCTAGTGAATAAGCAC 59.625 47.826 0.00 0.00 39.05 4.40
4824 5307 3.609853 CAGTTGCCCTAGTGAATAAGCA 58.390 45.455 0.00 0.00 0.00 3.91
4858 5341 2.435069 CTGCTGATGGGAGAGATGAGTT 59.565 50.000 0.00 0.00 35.24 3.01
4870 5353 1.508088 GCCCGAAAACTGCTGATGG 59.492 57.895 0.00 0.00 0.00 3.51
4878 5361 2.261430 GATACCCGGGCCCGAAAACT 62.261 60.000 45.44 24.51 42.83 2.66
4885 5368 1.716028 AAATCCAGATACCCGGGCCC 61.716 60.000 24.08 13.57 0.00 5.80
4888 5371 2.297701 CACAAAATCCAGATACCCGGG 58.702 52.381 22.25 22.25 0.00 5.73
4890 5373 4.457603 TGAAACACAAAATCCAGATACCCG 59.542 41.667 0.00 0.00 0.00 5.28
5133 5635 7.547722 GGTTAACCAATTGACAGTTGACTTTTT 59.452 33.333 20.12 1.07 32.38 1.94
5134 5636 7.039270 GGTTAACCAATTGACAGTTGACTTTT 58.961 34.615 20.12 3.12 32.38 2.27
5135 5637 6.569780 GGTTAACCAATTGACAGTTGACTTT 58.430 36.000 20.12 5.20 32.38 2.66
5150 5652 1.128809 TGGCTCCCTCGGTTAACCAA 61.129 55.000 24.14 5.10 35.14 3.67
5151 5653 1.536907 TGGCTCCCTCGGTTAACCA 60.537 57.895 24.14 10.51 35.14 3.67
5153 5655 1.221021 CCTGGCTCCCTCGGTTAAC 59.779 63.158 0.00 0.00 0.00 2.01
5154 5656 1.993391 CCCTGGCTCCCTCGGTTAA 60.993 63.158 0.00 0.00 0.00 2.01
5156 5658 3.864983 TTCCCTGGCTCCCTCGGTT 62.865 63.158 0.00 0.00 0.00 4.44
5157 5659 4.332543 TTCCCTGGCTCCCTCGGT 62.333 66.667 0.00 0.00 0.00 4.69
5158 5660 3.474570 CTTCCCTGGCTCCCTCGG 61.475 72.222 0.00 0.00 0.00 4.63
5159 5661 3.474570 CCTTCCCTGGCTCCCTCG 61.475 72.222 0.00 0.00 0.00 4.63
5160 5662 2.285743 ACCTTCCCTGGCTCCCTC 60.286 66.667 0.00 0.00 0.00 4.30
5161 5663 2.285743 GACCTTCCCTGGCTCCCT 60.286 66.667 0.00 0.00 0.00 4.20
5162 5664 3.412408 GGACCTTCCCTGGCTCCC 61.412 72.222 0.00 0.00 0.00 4.30
5179 5681 2.818274 GGTTCGGCCAAGCTACGG 60.818 66.667 2.24 0.00 37.17 4.02
5219 5721 0.173708 GCACCAGAACGAGGACTAGG 59.826 60.000 0.00 0.00 0.00 3.02
5225 5727 0.108615 CCTGTAGCACCAGAACGAGG 60.109 60.000 4.36 0.00 34.23 4.63
5232 5734 4.473520 CGGCCCCTGTAGCACCAG 62.474 72.222 0.00 0.00 0.00 4.00
5236 5738 0.689745 ACTAATCGGCCCCTGTAGCA 60.690 55.000 0.00 0.00 0.00 3.49
5366 5868 5.339008 AGGTATGTGCGTATTTCTTCAGA 57.661 39.130 0.00 0.00 0.00 3.27
5367 5869 6.923508 TCATAGGTATGTGCGTATTTCTTCAG 59.076 38.462 0.00 0.00 35.26 3.02
5368 5870 6.811954 TCATAGGTATGTGCGTATTTCTTCA 58.188 36.000 0.00 0.00 35.26 3.02
5369 5871 7.709269 TTCATAGGTATGTGCGTATTTCTTC 57.291 36.000 0.00 0.00 35.26 2.87
5370 5872 7.715249 ACATTCATAGGTATGTGCGTATTTCTT 59.285 33.333 0.00 0.00 34.24 2.52
5372 5874 7.421530 ACATTCATAGGTATGTGCGTATTTC 57.578 36.000 0.00 0.00 34.24 2.17
5376 5878 8.344446 AGTATACATTCATAGGTATGTGCGTA 57.656 34.615 9.55 0.00 35.99 4.42
5377 5879 7.228314 AGTATACATTCATAGGTATGTGCGT 57.772 36.000 9.55 0.00 35.99 5.24
5378 5880 8.459635 AGTAGTATACATTCATAGGTATGTGCG 58.540 37.037 9.55 0.00 46.26 5.34
5506 6008 4.668576 ATACGTTTTGATGTGAGCTGTG 57.331 40.909 0.00 0.00 0.00 3.66
5634 6136 4.989279 GCTCCATGAAGCCTGAATTTTA 57.011 40.909 0.00 0.00 36.22 1.52
5647 6149 0.998928 TTGGCTTTAGGGCTCCATGA 59.001 50.000 0.00 0.00 41.48 3.07
5660 6162 3.243359 TGGAGACAGGATTTTTGGCTT 57.757 42.857 0.00 0.00 32.95 4.35
5674 6176 1.501582 AGCAGGTCCCTAATGGAGAC 58.498 55.000 0.00 0.00 46.38 3.36
5678 6180 2.239654 TGAAGAAGCAGGTCCCTAATGG 59.760 50.000 0.00 0.00 0.00 3.16
5786 6289 9.788960 GAGTTGAGTTAATTCAGTCAAGTTTTT 57.211 29.630 15.47 0.76 39.09 1.94
5787 6290 8.956426 TGAGTTGAGTTAATTCAGTCAAGTTTT 58.044 29.630 15.47 2.64 39.09 2.43
5826 6329 6.734871 GCAAAACGGTGACTCTTTAGGAAAAT 60.735 38.462 0.00 0.00 0.00 1.82
5827 6330 5.449451 GCAAAACGGTGACTCTTTAGGAAAA 60.449 40.000 0.00 0.00 0.00 2.29
5920 6425 1.931551 CGTTGTGTGGGTTGACGAG 59.068 57.895 0.00 0.00 35.90 4.18
5980 6487 4.773323 ATTTGGCTAACAAGCTGAACTC 57.227 40.909 0.00 0.00 40.82 3.01
6056 6563 2.872408 GGCAGCAAGGCATGTTCTA 58.128 52.632 0.00 0.00 43.51 2.10
6101 6608 0.031994 GTTTTTGGGTGAGCGTGCAT 59.968 50.000 0.00 0.00 0.00 3.96
6139 6646 1.548719 TGTCGAGGGAGTTACCATGTG 59.451 52.381 0.00 0.00 41.20 3.21
6176 6683 3.513680 AATGCGGTCGTACAGTATTCA 57.486 42.857 0.00 0.00 0.00 2.57
6177 6684 3.244579 GGAAATGCGGTCGTACAGTATTC 59.755 47.826 0.00 0.00 28.97 1.75
6185 6692 1.518774 GAGGGGAAATGCGGTCGTA 59.481 57.895 0.00 0.00 0.00 3.43
6208 6715 3.300667 GAAGCCGCTGCACTTGACG 62.301 63.158 9.37 0.00 41.13 4.35
6454 6963 9.495572 AAATCCAGAACTTTGTTTTTGTGTTTA 57.504 25.926 0.00 0.00 0.00 2.01
6482 6991 9.702253 AGGTAGAACATCTAGAAGAACATCTAA 57.298 33.333 1.17 0.00 31.76 2.10
6669 7179 2.171840 GGACTTGCTAGTGAGACTCCA 58.828 52.381 5.27 0.00 33.84 3.86
6678 7188 2.567615 CCAGTAACCAGGACTTGCTAGT 59.432 50.000 0.00 0.00 37.31 2.57
6835 7349 1.380302 CCAGGCCATATACCCTGCC 59.620 63.158 5.01 0.00 45.75 4.85
6959 7476 4.338879 AGCTAGGGTACAAAGTTCGTAGA 58.661 43.478 0.00 0.00 0.00 2.59
6981 7498 1.347707 AGAATGTCCTGGTCGCTGAAA 59.652 47.619 0.00 0.00 0.00 2.69
6986 7503 2.362397 TGAGATAGAATGTCCTGGTCGC 59.638 50.000 0.00 0.00 0.00 5.19
7025 7542 4.642429 AGAACCATTGACCTTACTGACAC 58.358 43.478 0.00 0.00 0.00 3.67
7028 7545 4.020218 CCTGAGAACCATTGACCTTACTGA 60.020 45.833 0.00 0.00 0.00 3.41
7031 7548 4.003648 CACCTGAGAACCATTGACCTTAC 58.996 47.826 0.00 0.00 0.00 2.34
7125 7642 1.547675 GCAAACCTGTGAGGGGAATCA 60.548 52.381 0.00 0.00 40.58 2.57
7159 7676 3.503748 GTGCAAGCATCTCCAGTTAACTT 59.496 43.478 5.07 0.00 0.00 2.66
7252 8310 1.276622 AGAGGTACATCCGCCAAGTT 58.723 50.000 3.44 0.00 41.99 2.66
7254 8312 1.482593 AGAAGAGGTACATCCGCCAAG 59.517 52.381 3.44 0.00 41.99 3.61
7386 8919 0.762418 TATATGGGGCCAACTCACCG 59.238 55.000 4.39 0.00 0.00 4.94
7495 9137 1.134551 GCAACACAACCCACCACAATT 60.135 47.619 0.00 0.00 0.00 2.32
7599 9245 9.255304 TCTGTTTTGAAAAATACAAATACCAGC 57.745 29.630 0.00 0.00 37.15 4.85
7635 9281 7.069826 CCCTTCTTAATTAATGGATGAGGCAAA 59.930 37.037 0.00 0.00 0.00 3.68
7752 9398 2.353610 CCAGGCTTTGGGACATGGC 61.354 63.158 0.00 0.00 43.75 4.40
7766 9412 2.941720 GCTCATCAAGAGTAAAGCCAGG 59.058 50.000 0.00 0.00 46.47 4.45
7767 9413 3.373439 GTGCTCATCAAGAGTAAAGCCAG 59.627 47.826 0.00 0.00 46.47 4.85
7805 9451 0.589223 GTCGAAACAAATCCACGCCA 59.411 50.000 0.00 0.00 0.00 5.69
7814 9460 3.210227 TGCTTGGATCTGTCGAAACAAA 58.790 40.909 0.00 0.00 34.24 2.83
7821 9467 3.529533 AGAGAAATGCTTGGATCTGTCG 58.470 45.455 0.00 0.00 0.00 4.35
7824 9470 5.008811 GGAATGAGAGAAATGCTTGGATCTG 59.991 44.000 0.00 0.00 0.00 2.90
7828 9474 4.305539 TGGAATGAGAGAAATGCTTGGA 57.694 40.909 0.00 0.00 0.00 3.53
7829 9475 6.544931 TCTTATGGAATGAGAGAAATGCTTGG 59.455 38.462 0.00 0.00 33.60 3.61
7862 9508 1.327460 CTCGATGGGCGTATGTTTGTG 59.673 52.381 0.00 0.00 41.80 3.33
7863 9509 1.206132 TCTCGATGGGCGTATGTTTGT 59.794 47.619 0.00 0.00 41.80 2.83
7872 9518 0.389817 TTGACTTGTCTCGATGGGCG 60.390 55.000 2.35 0.00 42.69 6.13
7884 9607 1.246737 GCTTGGAGGCCCTTGACTTG 61.247 60.000 0.00 0.00 0.00 3.16
7902 9625 3.304928 CGATGATTAAGGATTGGCTTGGC 60.305 47.826 0.00 0.00 0.00 4.52
7951 9674 2.639347 TGGCCACTCATCTCTTCTTCAA 59.361 45.455 0.00 0.00 0.00 2.69
8037 9761 3.611766 AATAGGGTGTGTACTGCAGAC 57.388 47.619 23.35 14.55 40.28 3.51
8040 9764 3.073209 TCCAAAATAGGGTGTGTACTGCA 59.927 43.478 0.00 0.00 0.00 4.41
8043 9767 5.190925 TGCTATCCAAAATAGGGTGTGTACT 59.809 40.000 0.00 0.00 0.00 2.73
8150 9874 4.339247 GGCATTGGCATACAGAGTACAATT 59.661 41.667 5.17 0.00 43.71 2.32
8156 9880 1.097547 GCGGCATTGGCATACAGAGT 61.098 55.000 11.10 0.00 43.71 3.24
8159 9883 1.357690 CAGCGGCATTGGCATACAG 59.642 57.895 11.10 0.00 43.71 2.74
8176 9900 4.038271 AGATGGAAGATTTTGGACAGCA 57.962 40.909 0.00 0.00 0.00 4.41
8202 9926 1.242076 AATAGCGATGCCAAGGATGC 58.758 50.000 0.00 0.00 0.00 3.91
8217 9941 6.152379 GCTTTCTTTGAGTTCACCCAAATAG 58.848 40.000 0.00 0.00 32.60 1.73
8223 9947 1.266989 CGGCTTTCTTTGAGTTCACCC 59.733 52.381 0.00 0.00 0.00 4.61
8239 9963 0.463654 TCACAACTCACTTTGCGGCT 60.464 50.000 0.00 0.00 0.00 5.52
8249 9973 2.945008 CCTTTGCTTCACTCACAACTCA 59.055 45.455 0.00 0.00 0.00 3.41
8250 9974 2.291741 CCCTTTGCTTCACTCACAACTC 59.708 50.000 0.00 0.00 0.00 3.01
8253 9977 1.064017 ACCCCTTTGCTTCACTCACAA 60.064 47.619 0.00 0.00 0.00 3.33
8266 9990 1.968050 CTCATACGCCCGACCCCTTT 61.968 60.000 0.00 0.00 0.00 3.11
8334 10058 0.250234 TCTTGGATCTTGGCCGTCTG 59.750 55.000 0.00 0.00 0.00 3.51
8338 10062 0.179062 CCTCTCTTGGATCTTGGCCG 60.179 60.000 0.00 0.00 0.00 6.13
8348 10072 1.840737 TCCTCGTCTTCCTCTCTTGG 58.159 55.000 0.00 0.00 0.00 3.61
8349 10073 3.194542 ACATTCCTCGTCTTCCTCTCTTG 59.805 47.826 0.00 0.00 0.00 3.02
8350 10074 3.436243 ACATTCCTCGTCTTCCTCTCTT 58.564 45.455 0.00 0.00 0.00 2.85
8387 10111 3.464907 CTCGTCTACTCCGTCCTTGATA 58.535 50.000 0.00 0.00 0.00 2.15
8420 10144 7.116948 CACCATCTATGTTTAATCTCATCGTCC 59.883 40.741 0.00 0.00 0.00 4.79
8426 10150 6.386927 ACTCCCACCATCTATGTTTAATCTCA 59.613 38.462 0.00 0.00 0.00 3.27
8435 10159 4.620723 TGAAGTACTCCCACCATCTATGT 58.379 43.478 0.00 0.00 0.00 2.29
8445 10169 5.012664 TGAATAGCTTGTTGAAGTACTCCCA 59.987 40.000 0.00 0.00 0.00 4.37
8455 10179 4.018506 TCTCCCCATTGAATAGCTTGTTGA 60.019 41.667 0.00 0.00 0.00 3.18
8456 10180 4.272489 TCTCCCCATTGAATAGCTTGTTG 58.728 43.478 0.00 0.00 0.00 3.33
8457 10181 4.591321 TCTCCCCATTGAATAGCTTGTT 57.409 40.909 0.00 0.00 0.00 2.83
8465 10189 5.611835 AGAGATCTCATTCTCCCCATTGAAT 59.388 40.000 24.39 0.00 42.63 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.