Multiple sequence alignment - TraesCS2A01G163200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G163200 chr2A 100.000 5828 0 0 1 5828 115448298 115454125 0.000000e+00 10763.0
1 TraesCS2A01G163200 chr2B 93.215 2653 108 36 589 3196 164638285 164640910 0.000000e+00 3836.0
2 TraesCS2A01G163200 chr2B 92.665 1227 58 18 3314 4511 164640903 164642126 0.000000e+00 1738.0
3 TraesCS2A01G163200 chr2B 94.781 709 19 3 4597 5292 164642134 164642837 0.000000e+00 1088.0
4 TraesCS2A01G163200 chr2B 88.325 591 60 5 1 589 522993056 522993639 0.000000e+00 701.0
5 TraesCS2A01G163200 chr2B 98.485 132 2 0 3191 3322 590923790 590923659 3.510000e-57 233.0
6 TraesCS2A01G163200 chr2B 94.483 145 4 4 3195 3338 627325099 627325240 2.730000e-53 220.0
7 TraesCS2A01G163200 chr2B 92.908 141 8 2 5410 5548 164659689 164659829 2.750000e-48 204.0
8 TraesCS2A01G163200 chr2B 91.241 137 12 0 5692 5828 763964915 763964779 2.770000e-43 187.0
9 TraesCS2A01G163200 chr2B 98.750 80 1 0 5609 5688 164660227 164660306 6.090000e-30 143.0
10 TraesCS2A01G163200 chr2B 87.129 101 6 3 4498 4598 668173373 668173466 2.220000e-19 108.0
11 TraesCS2A01G163200 chr2B 89.474 57 6 0 5293 5349 647449722 647449666 8.100000e-09 73.1
12 TraesCS2A01G163200 chr2B 87.273 55 6 1 5291 5344 154832522 154832468 1.750000e-05 62.1
13 TraesCS2A01G163200 chr2D 94.259 1916 76 13 1305 3196 114219638 114221543 0.000000e+00 2898.0
14 TraesCS2A01G163200 chr2D 94.754 934 34 5 3318 4240 114221540 114222469 0.000000e+00 1439.0
15 TraesCS2A01G163200 chr2D 88.715 1152 62 28 4232 5354 114222732 114223844 0.000000e+00 1345.0
16 TraesCS2A01G163200 chr2D 92.581 620 22 13 589 1201 114218555 114219157 0.000000e+00 869.0
17 TraesCS2A01G163200 chr2D 94.326 282 10 4 5410 5689 114225686 114225963 1.500000e-115 427.0
18 TraesCS2A01G163200 chr2D 91.971 137 11 0 5692 5828 580120445 580120309 5.960000e-45 193.0
19 TraesCS2A01G163200 chr2D 86.316 95 8 3 4506 4599 577577814 577577904 1.340000e-16 99.0
20 TraesCS2A01G163200 chr2D 86.538 52 5 2 5293 5344 48132495 48132544 8.160000e-04 56.5
21 TraesCS2A01G163200 chr7A 87.925 588 63 4 2 587 694058759 694059340 0.000000e+00 686.0
22 TraesCS2A01G163200 chr7A 97.143 350 10 0 1 350 710491397 710491048 5.030000e-165 592.0
23 TraesCS2A01G163200 chr7A 96.857 350 11 0 1 350 707812348 707812697 2.340000e-163 586.0
24 TraesCS2A01G163200 chr7A 92.908 141 10 0 5688 5828 561804632 561804772 7.660000e-49 206.0
25 TraesCS2A01G163200 chrUn 97.118 347 10 0 3 349 291410758 291410412 2.340000e-163 586.0
26 TraesCS2A01G163200 chrUn 96.324 136 5 0 3188 3323 183130874 183131009 2.110000e-54 224.0
27 TraesCS2A01G163200 chrUn 97.656 128 3 0 3195 3322 259012 258885 2.730000e-53 220.0
28 TraesCS2A01G163200 chrUn 95.652 138 4 2 3185 3321 74690422 74690558 2.730000e-53 220.0
29 TraesCS2A01G163200 chrUn 95.652 138 4 2 3185 3321 253063358 253063494 2.730000e-53 220.0
30 TraesCS2A01G163200 chrUn 95.588 136 6 0 3188 3323 183183410 183183545 9.830000e-53 219.0
31 TraesCS2A01G163200 chrUn 95.588 136 6 0 3188 3323 254881173 254881308 9.830000e-53 219.0
32 TraesCS2A01G163200 chrUn 96.875 128 4 0 3195 3322 289918 289791 1.270000e-51 215.0
33 TraesCS2A01G163200 chrUn 96.850 127 4 0 3195 3321 88590111 88590237 4.570000e-51 213.0
34 TraesCS2A01G163200 chrUn 93.571 140 7 2 3188 3326 30405429 30405291 2.130000e-49 207.0
35 TraesCS2A01G163200 chrUn 90.000 140 14 0 5689 5828 115109769 115109908 1.290000e-41 182.0
36 TraesCS2A01G163200 chrUn 89.051 137 15 0 5692 5828 115110320 115110184 2.790000e-38 171.0
37 TraesCS2A01G163200 chrUn 87.023 131 15 2 5699 5828 461738752 461738623 4.710000e-31 147.0
38 TraesCS2A01G163200 chrUn 90.244 82 5 1 4509 4590 115106854 115106776 2.870000e-18 104.0
39 TraesCS2A01G163200 chrUn 89.744 78 8 0 5692 5769 29083141 29083064 3.720000e-17 100.0
40 TraesCS2A01G163200 chrUn 91.837 49 2 2 4561 4609 19198809 19198763 3.770000e-07 67.6
41 TraesCS2A01G163200 chrUn 93.182 44 3 0 4556 4599 287635318 287635275 1.360000e-06 65.8
42 TraesCS2A01G163200 chrUn 93.182 44 3 0 4556 4599 292970696 292970739 1.360000e-06 65.8
43 TraesCS2A01G163200 chrUn 93.182 44 3 0 4556 4599 338766119 338766162 1.360000e-06 65.8
44 TraesCS2A01G163200 chrUn 97.222 36 1 0 4563 4598 27942193 27942228 1.750000e-05 62.1
45 TraesCS2A01G163200 chr5A 97.118 347 10 0 2 348 17521507 17521853 2.340000e-163 586.0
46 TraesCS2A01G163200 chr5A 93.522 247 15 1 350 595 45711753 45711507 3.320000e-97 366.0
47 TraesCS2A01G163200 chr5A 99.231 130 1 0 3192 3321 688512349 688512220 9.760000e-58 235.0
48 TraesCS2A01G163200 chr5A 91.209 91 5 1 4506 4596 624795508 624795595 2.850000e-23 121.0
49 TraesCS2A01G163200 chr5A 88.421 95 8 3 4509 4600 692844205 692844299 1.720000e-20 111.0
50 TraesCS2A01G163200 chr5A 90.385 52 5 0 5293 5344 342458219 342458270 1.050000e-07 69.4
51 TraesCS2A01G163200 chr4A 97.118 347 10 0 3 349 690223180 690223526 2.340000e-163 586.0
52 TraesCS2A01G163200 chr4A 94.561 239 13 0 350 588 690223288 690223526 2.570000e-98 370.0
53 TraesCS2A01G163200 chr4A 99.231 130 1 0 3193 3322 627359965 627359836 9.760000e-58 235.0
54 TraesCS2A01G163200 chr4A 90.714 140 13 0 5689 5828 514555496 514555635 2.770000e-43 187.0
55 TraesCS2A01G163200 chr1B 96.830 347 11 0 2 348 310754765 310754419 1.090000e-161 580.0
56 TraesCS2A01G163200 chr1B 93.522 247 15 1 350 596 557944690 557944445 3.320000e-97 366.0
57 TraesCS2A01G163200 chr1B 94.156 154 6 3 3184 3335 306097511 306097663 1.260000e-56 231.0
58 TraesCS2A01G163200 chr1B 96.377 138 5 0 3187 3324 526748576 526748713 1.630000e-55 228.0
59 TraesCS2A01G163200 chr1B 97.015 134 4 0 3195 3328 669017052 669017185 5.880000e-55 226.0
60 TraesCS2A01G163200 chr6B 96.045 354 14 0 2 355 245700085 245700438 1.410000e-160 577.0
61 TraesCS2A01G163200 chr6B 90.714 140 13 0 5689 5828 655303362 655303501 2.770000e-43 187.0
62 TraesCS2A01G163200 chr3A 91.781 365 29 1 2 365 234310 234674 1.870000e-139 507.0
63 TraesCS2A01G163200 chr3A 93.878 245 15 0 350 594 672638357 672638113 2.570000e-98 370.0
64 TraesCS2A01G163200 chr3A 94.191 241 14 0 350 590 246045776 246046016 9.230000e-98 368.0
65 TraesCS2A01G163200 chr3A 98.496 133 2 0 3191 3323 38671245 38671377 9.760000e-58 235.0
66 TraesCS2A01G163200 chr3A 97.101 138 4 0 3184 3321 383710079 383709942 3.510000e-57 233.0
67 TraesCS2A01G163200 chr3A 98.473 131 2 0 3192 3322 569426553 569426423 1.260000e-56 231.0
68 TraesCS2A01G163200 chr3A 92.701 137 10 0 5692 5828 512874526 512874390 1.280000e-46 198.0
69 TraesCS2A01G163200 chr3A 91.241 137 12 0 5692 5828 686127353 686127217 2.770000e-43 187.0
70 TraesCS2A01G163200 chr3A 89.474 95 7 1 4507 4601 621211506 621211415 3.690000e-22 117.0
71 TraesCS2A01G163200 chr3B 86.863 373 34 11 2 364 817320574 817320207 2.530000e-108 403.0
72 TraesCS2A01G163200 chr3B 92.481 133 10 0 5688 5820 764043487 764043619 2.140000e-44 191.0
73 TraesCS2A01G163200 chr3B 89.474 95 6 2 4507 4601 637059477 637059387 3.690000e-22 117.0
74 TraesCS2A01G163200 chr3B 90.385 52 5 0 5291 5342 800219018 800219069 1.050000e-07 69.4
75 TraesCS2A01G163200 chr1A 94.979 239 12 0 350 588 304794068 304793830 5.510000e-100 375.0
76 TraesCS2A01G163200 chr1A 94.561 239 12 1 350 588 304614603 304614366 9.230000e-98 368.0
77 TraesCS2A01G163200 chr1A 99.237 131 1 0 3195 3325 12159685 12159815 2.710000e-58 237.0
78 TraesCS2A01G163200 chr1A 98.485 132 1 1 3194 3325 14080640 14080510 1.260000e-56 231.0
79 TraesCS2A01G163200 chr1A 97.080 137 2 2 3194 3328 311814212 311814076 4.540000e-56 230.0
80 TraesCS2A01G163200 chr1A 98.438 128 2 0 3194 3321 14170063 14170190 5.880000e-55 226.0
81 TraesCS2A01G163200 chr1A 95.683 139 4 2 3184 3321 7331925 7331788 7.600000e-54 222.0
82 TraesCS2A01G163200 chr1A 94.444 144 6 2 3194 3336 111151781 111151639 2.730000e-53 220.0
83 TraesCS2A01G163200 chr1A 94.366 142 6 1 3193 3334 378182950 378182811 3.540000e-52 217.0
84 TraesCS2A01G163200 chr1A 90.071 141 14 0 5688 5828 586757356 586757216 3.590000e-42 183.0
85 TraesCS2A01G163200 chr1A 90.511 137 13 0 5692 5828 300855266 300855130 1.290000e-41 182.0
86 TraesCS2A01G163200 chr1A 93.548 93 3 1 4505 4597 568396073 568396162 1.020000e-27 135.0
87 TraesCS2A01G163200 chr1A 88.542 96 4 5 4506 4599 511001507 511001597 6.170000e-20 110.0
88 TraesCS2A01G163200 chr1A 94.595 37 0 2 5285 5320 548305974 548305939 8.160000e-04 56.5
89 TraesCS2A01G163200 chr4B 99.219 128 1 0 3194 3321 210282885 210282758 1.260000e-56 231.0
90 TraesCS2A01G163200 chr4B 97.727 132 3 0 3194 3325 294107702 294107571 1.630000e-55 228.0
91 TraesCS2A01G163200 chr4B 90.698 86 5 1 4511 4596 650697377 650697295 1.720000e-20 111.0
92 TraesCS2A01G163200 chr4B 91.228 57 3 2 5289 5344 119336143 119336088 6.260000e-10 76.8
93 TraesCS2A01G163200 chr5D 95.620 137 6 0 3185 3321 409358239 409358375 2.730000e-53 220.0
94 TraesCS2A01G163200 chr5D 90.071 141 14 0 5688 5828 325427538 325427678 3.590000e-42 183.0
95 TraesCS2A01G163200 chr5D 91.209 91 5 1 4509 4599 539963186 539963273 2.850000e-23 121.0
96 TraesCS2A01G163200 chr5D 90.244 82 4 2 4509 4590 30428686 30428763 2.870000e-18 104.0
97 TraesCS2A01G163200 chr5D 87.500 88 8 1 4509 4596 539963270 539963186 1.340000e-16 99.0
98 TraesCS2A01G163200 chr3D 95.652 138 5 1 3188 3325 464998589 464998725 2.730000e-53 220.0
99 TraesCS2A01G163200 chr3D 90.511 137 13 0 5692 5828 448263252 448263116 1.290000e-41 182.0
100 TraesCS2A01G163200 chr3D 90.000 140 14 0 5689 5828 579579419 579579280 1.290000e-41 182.0
101 TraesCS2A01G163200 chr3D 94.118 34 2 0 5291 5324 300503773 300503806 1.100000e-02 52.8
102 TraesCS2A01G163200 chr6D 96.923 130 4 0 3194 3323 7657184 7657055 9.830000e-53 219.0
103 TraesCS2A01G163200 chr6D 94.815 135 7 0 3187 3321 28125103 28125237 1.650000e-50 211.0
104 TraesCS2A01G163200 chr6D 90.071 141 14 0 5688 5828 115651613 115651473 3.590000e-42 183.0
105 TraesCS2A01G163200 chr6D 90.071 141 14 0 5688 5828 254819995 254820135 3.590000e-42 183.0
106 TraesCS2A01G163200 chr6D 90.511 137 13 0 5692 5828 431933123 431932987 1.290000e-41 182.0
107 TraesCS2A01G163200 chr6D 89.286 140 15 0 5689 5828 47269891 47270030 6.000000e-40 176.0
108 TraesCS2A01G163200 chr6D 89.286 140 15 0 5689 5828 286637396 286637535 6.000000e-40 176.0
109 TraesCS2A01G163200 chr6D 90.769 130 12 0 5699 5828 310524704 310524575 2.160000e-39 174.0
110 TraesCS2A01G163200 chr6D 86.525 141 19 0 5688 5828 85813843 85813983 7.820000e-34 156.0
111 TraesCS2A01G163200 chr6D 89.773 88 6 1 4509 4596 471069853 471069937 6.170000e-20 110.0
112 TraesCS2A01G163200 chr6D 95.522 67 3 0 4532 4598 203859062 203858996 2.220000e-19 108.0
113 TraesCS2A01G163200 chr6D 88.636 88 7 1 4509 4596 63328200 63328284 2.870000e-18 104.0
114 TraesCS2A01G163200 chr6D 85.437 103 10 3 4497 4598 131945826 131945924 1.030000e-17 102.0
115 TraesCS2A01G163200 chr6D 87.912 91 6 3 4509 4598 199210412 199210326 1.030000e-17 102.0
116 TraesCS2A01G163200 chr6D 88.636 88 2 2 4509 4596 72021808 72021729 3.720000e-17 100.0
117 TraesCS2A01G163200 chr6D 87.640 89 3 4 4509 4597 72021729 72021809 4.810000e-16 97.1
118 TraesCS2A01G163200 chr6D 86.022 93 8 3 4507 4598 304097696 304097608 1.730000e-15 95.3
119 TraesCS2A01G163200 chr6D 88.889 45 5 0 5291 5335 347355025 347354981 8.160000e-04 56.5
120 TraesCS2A01G163200 chr1D 97.638 127 3 0 3195 3321 108103286 108103160 9.830000e-53 219.0
121 TraesCS2A01G163200 chr1D 89.796 147 15 0 5682 5828 250740824 250740970 7.710000e-44 189.0
122 TraesCS2A01G163200 chr1D 91.241 137 12 0 5692 5828 19875233 19875097 2.770000e-43 187.0
123 TraesCS2A01G163200 chr1D 91.241 137 12 0 5692 5828 117968240 117968104 2.770000e-43 187.0
124 TraesCS2A01G163200 chr1D 90.071 141 14 0 5688 5828 196096333 196096193 3.590000e-42 183.0
125 TraesCS2A01G163200 chr1D 90.511 137 13 0 5692 5828 250741383 250741247 1.290000e-41 182.0
126 TraesCS2A01G163200 chr1D 92.308 91 3 2 4506 4595 478063981 478064068 6.130000e-25 126.0
127 TraesCS2A01G163200 chr1D 94.595 37 0 2 5285 5320 121316769 121316804 8.160000e-04 56.5
128 TraesCS2A01G163200 chr6A 89.773 88 1 2 4509 4596 88767667 88767588 7.990000e-19 106.0
129 TraesCS2A01G163200 chr6A 89.474 57 5 1 5294 5350 10597046 10597101 2.910000e-08 71.3
130 TraesCS2A01G163200 chr6A 90.385 52 5 0 5293 5344 454931459 454931510 1.050000e-07 69.4
131 TraesCS2A01G163200 chr4D 85.870 92 8 3 4509 4599 418772499 418772412 6.220000e-15 93.5
132 TraesCS2A01G163200 chr5B 92.857 56 2 2 5289 5343 679749783 679749837 4.840000e-11 80.5
133 TraesCS2A01G163200 chr5B 91.228 57 4 1 5289 5344 421288400 421288344 6.260000e-10 76.8
134 TraesCS2A01G163200 chr5B 100.000 28 0 0 5293 5320 686877134 686877161 1.100000e-02 52.8
135 TraesCS2A01G163200 chr5B 100.000 28 0 0 5293 5320 686931813 686931840 1.100000e-02 52.8
136 TraesCS2A01G163200 chr7D 86.667 60 5 2 5293 5352 520858057 520858001 4.880000e-06 63.9
137 TraesCS2A01G163200 chr7D 87.037 54 6 1 5292 5344 126482479 126482532 6.310000e-05 60.2
138 TraesCS2A01G163200 chr7D 86.538 52 7 0 5293 5344 35406337 35406388 2.270000e-04 58.4
139 TraesCS2A01G163200 chr7D 100.000 28 0 0 5293 5320 19654730 19654757 1.100000e-02 52.8
140 TraesCS2A01G163200 chr7B 88.462 52 5 1 5293 5344 618544767 618544717 1.750000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G163200 chr2A 115448298 115454125 5827 False 10763.000000 10763 100.000000 1 5828 1 chr2A.!!$F1 5827
1 TraesCS2A01G163200 chr2B 164638285 164642837 4552 False 2220.666667 3836 93.553667 589 5292 3 chr2B.!!$F4 4703
2 TraesCS2A01G163200 chr2B 522993056 522993639 583 False 701.000000 701 88.325000 1 589 1 chr2B.!!$F1 588
3 TraesCS2A01G163200 chr2D 114218555 114225963 7408 False 1395.600000 2898 92.927000 589 5689 5 chr2D.!!$F3 5100
4 TraesCS2A01G163200 chr7A 694058759 694059340 581 False 686.000000 686 87.925000 2 587 1 chr7A.!!$F2 585

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
819 829 0.455410 CACAGGAAGGAGAGAGAGCG 59.545 60.0 0.0 0.0 0.0 5.03 F
1497 1928 0.243636 GCAGAATTGGGTTTGGGACG 59.756 55.0 0.0 0.0 0.0 4.79 F
2046 2483 0.393537 CCTGCTGCTTTACTGAGGGG 60.394 60.0 0.0 0.0 0.0 4.79 F
3211 3652 0.038744 AGTACTCCCTCCGTTCCGAA 59.961 55.0 0.0 0.0 0.0 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2769 3208 0.032403 AATCGTTCGGGTGACGTGAA 59.968 50.0 0.0 0.00 44.69 3.18 R
3189 3630 1.031235 GGAACGGAGGGAGTACTAGC 58.969 60.0 0.0 0.00 0.00 3.42 R
3603 4044 0.592148 CGACTATAGTCAGGGTCGGC 59.408 60.0 28.0 3.44 44.99 5.54 R
5165 5915 0.527565 GCGAACCATGCAAATCACCT 59.472 50.0 0.0 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 93 2.303022 CAAGCACCCCTGACTAAAGAGA 59.697 50.000 0.00 0.00 0.00 3.10
98 99 2.962421 CCCCTGACTAAAGAGAGGCTAG 59.038 54.545 0.00 0.00 0.00 3.42
120 121 7.063662 GCTAGAACTAGTCTTGAGGCTAAAAAC 59.936 40.741 0.00 0.00 37.84 2.43
178 180 6.956202 AGCCCTCTCTTTCATCATTTAATG 57.044 37.500 0.00 0.00 0.00 1.90
195 197 7.615365 TCATTTAATGCCTCTCCTTTAACACAT 59.385 33.333 0.00 0.00 0.00 3.21
238 240 6.323739 GGGTTTGGAGGATAATAAATGCTCAA 59.676 38.462 8.48 0.00 38.10 3.02
280 282 8.806429 TCTTTAGTATTTGAATCCAAGCATGA 57.194 30.769 0.00 0.00 33.23 3.07
284 286 4.730949 ATTTGAATCCAAGCATGAGTGG 57.269 40.909 8.46 8.46 36.13 4.00
350 352 2.431057 ACGTATCCAAGCACCCTCTAAG 59.569 50.000 0.00 0.00 0.00 2.18
351 353 2.224066 CGTATCCAAGCACCCTCTAAGG 60.224 54.545 0.00 0.00 34.30 2.69
352 354 0.548510 ATCCAAGCACCCTCTAAGGC 59.451 55.000 0.00 0.00 32.73 4.35
353 355 0.547712 TCCAAGCACCCTCTAAGGCT 60.548 55.000 0.00 0.00 38.45 4.58
354 356 1.204146 CCAAGCACCCTCTAAGGCTA 58.796 55.000 0.00 0.00 35.11 3.93
355 357 1.559682 CCAAGCACCCTCTAAGGCTAA 59.440 52.381 0.00 0.00 35.11 3.09
406 409 9.632807 CTAAAATATGTATTAGCGCTCTCTCTT 57.367 33.333 16.34 4.77 0.00 2.85
407 410 8.894768 AAAATATGTATTAGCGCTCTCTCTTT 57.105 30.769 16.34 2.18 0.00 2.52
416 419 7.849804 TTAGCGCTCTCTCTTTTCATTTAAT 57.150 32.000 16.34 0.00 0.00 1.40
450 453 7.857734 TTAATAAATGCGAGTTCTGGATTGA 57.142 32.000 0.00 0.00 0.00 2.57
477 480 6.323739 GGGTTTGGAGGATAATAAATGCTCAA 59.676 38.462 8.48 0.00 38.10 3.02
533 536 3.920231 AGCATGGATGAGACTAGCAAA 57.080 42.857 0.00 0.00 0.00 3.68
545 548 6.721318 TGAGACTAGCAAATTTTAGTCCCAT 58.279 36.000 19.58 7.71 44.32 4.00
548 551 9.343539 GAGACTAGCAAATTTTAGTCCCATTAT 57.656 33.333 19.58 6.66 44.32 1.28
665 669 2.167861 CCGCTCCGCTTTCACTAGC 61.168 63.158 0.00 0.00 37.80 3.42
711 715 4.816984 GCATCTGGCTGGCTGGCT 62.817 66.667 18.27 0.00 42.34 4.75
712 716 2.829003 CATCTGGCTGGCTGGCTG 60.829 66.667 18.27 17.23 42.34 4.85
713 717 4.124943 ATCTGGCTGGCTGGCTGG 62.125 66.667 20.51 12.93 42.34 4.85
795 799 1.449778 GGCCTAAGTTCCTGTCGCC 60.450 63.158 0.00 0.00 0.00 5.54
797 801 0.741221 GCCTAAGTTCCTGTCGCCAG 60.741 60.000 0.00 0.00 38.50 4.85
798 802 0.741221 CCTAAGTTCCTGTCGCCAGC 60.741 60.000 0.00 0.00 37.38 4.85
801 805 4.329545 GTTCCTGTCGCCAGCCCA 62.330 66.667 0.00 0.00 37.38 5.36
802 806 4.329545 TTCCTGTCGCCAGCCCAC 62.330 66.667 0.00 0.00 37.38 4.61
811 821 2.673523 CCAGCCCACAGGAAGGAG 59.326 66.667 0.00 0.00 33.47 3.69
812 822 1.920325 CCAGCCCACAGGAAGGAGA 60.920 63.158 0.00 0.00 33.47 3.71
819 829 0.455410 CACAGGAAGGAGAGAGAGCG 59.545 60.000 0.00 0.00 0.00 5.03
837 847 1.647629 GGCAGAAGCATCATCAGCG 59.352 57.895 0.00 0.00 44.61 5.18
909 933 4.144681 GCGCTTCTCGTGCTGCTG 62.145 66.667 0.00 0.00 45.56 4.41
910 934 4.144681 CGCTTCTCGTGCTGCTGC 62.145 66.667 8.89 8.89 40.20 5.25
1256 1281 1.079503 GAGCACGACATTTGGAGGTC 58.920 55.000 0.00 0.00 33.40 3.85
1266 1291 0.762418 TTTGGAGGTCAGCTTTCCGA 59.238 50.000 0.00 0.00 33.60 4.55
1267 1292 0.321671 TTGGAGGTCAGCTTTCCGAG 59.678 55.000 0.00 0.00 33.60 4.63
1353 1755 0.880718 GAGATCCCCGCGATTTGACC 60.881 60.000 8.23 0.00 0.00 4.02
1354 1756 2.203015 ATCCCCGCGATTTGACCG 60.203 61.111 8.23 0.00 0.00 4.79
1380 1783 5.453281 TGATGCGATTTTGCTTTATTTGC 57.547 34.783 0.00 0.00 35.36 3.68
1419 1850 2.791501 ATCGCCTGTTTACGGCCGTT 62.792 55.000 38.94 20.63 44.73 4.44
1440 1871 5.332205 CGTTCCGAATTTTGTGGTGAAATTG 60.332 40.000 0.08 0.00 36.96 2.32
1460 1891 1.794116 GTGCCGCTGTTTCGTTAGTTA 59.206 47.619 0.00 0.00 0.00 2.24
1461 1892 2.414138 GTGCCGCTGTTTCGTTAGTTAT 59.586 45.455 0.00 0.00 0.00 1.89
1462 1893 3.068560 TGCCGCTGTTTCGTTAGTTATT 58.931 40.909 0.00 0.00 0.00 1.40
1463 1894 4.091800 GTGCCGCTGTTTCGTTAGTTATTA 59.908 41.667 0.00 0.00 0.00 0.98
1497 1928 0.243636 GCAGAATTGGGTTTGGGACG 59.756 55.000 0.00 0.00 0.00 4.79
1522 1953 3.366679 CGGTAGAAGAACGACAAGGCTTA 60.367 47.826 0.00 0.00 0.00 3.09
1578 2010 2.285977 GCGATTTTGGTATTCCCTCGT 58.714 47.619 0.00 0.00 0.00 4.18
1592 2024 4.720649 TCCCTCGTATGAAGTTTGAGAG 57.279 45.455 0.00 0.00 0.00 3.20
1593 2025 3.447586 TCCCTCGTATGAAGTTTGAGAGG 59.552 47.826 1.89 1.89 42.36 3.69
1657 2089 5.766150 TTCGACAAGAAATTGGTGAACAT 57.234 34.783 0.00 0.00 35.61 2.71
1725 2157 3.096092 ACAGGTGTGGTTTGATGTGTTT 58.904 40.909 0.00 0.00 0.00 2.83
1783 2215 7.285629 TCGATTGTCTGTTTGGTCTCTCTATAT 59.714 37.037 0.00 0.00 0.00 0.86
1784 2216 8.568794 CGATTGTCTGTTTGGTCTCTCTATATA 58.431 37.037 0.00 0.00 0.00 0.86
1785 2217 9.906660 GATTGTCTGTTTGGTCTCTCTATATAG 57.093 37.037 3.10 3.10 0.00 1.31
1786 2218 8.824756 TTGTCTGTTTGGTCTCTCTATATAGT 57.175 34.615 9.58 0.00 0.00 2.12
1787 2219 9.916360 TTGTCTGTTTGGTCTCTCTATATAGTA 57.084 33.333 9.58 0.00 0.00 1.82
1817 2249 9.177608 TGAAATTAGAAGTTCATCGATCCAAAT 57.822 29.630 5.50 0.00 37.99 2.32
1869 2301 3.579709 CTTGTGTGATCTAGCGTGAGTT 58.420 45.455 0.00 0.00 0.00 3.01
1885 2317 6.598457 AGCGTGAGTTCTCTACAGAAATACTA 59.402 38.462 1.53 0.00 40.49 1.82
1886 2318 6.908284 GCGTGAGTTCTCTACAGAAATACTAG 59.092 42.308 1.53 0.00 40.49 2.57
1887 2319 7.414319 GCGTGAGTTCTCTACAGAAATACTAGT 60.414 40.741 0.00 0.00 40.49 2.57
1888 2320 9.096160 CGTGAGTTCTCTACAGAAATACTAGTA 57.904 37.037 4.77 4.77 40.49 1.82
2018 2455 5.665916 AATTGAGAAATTAGGGTTGCTGG 57.334 39.130 0.00 0.00 0.00 4.85
2021 2458 3.181434 TGAGAAATTAGGGTTGCTGGTGT 60.181 43.478 0.00 0.00 0.00 4.16
2046 2483 0.393537 CCTGCTGCTTTACTGAGGGG 60.394 60.000 0.00 0.00 0.00 4.79
2115 2553 3.520569 GTTTGGTTGTGTCTTTGCATGT 58.479 40.909 0.00 0.00 0.00 3.21
2119 2557 3.181488 TGGTTGTGTCTTTGCATGTTCTG 60.181 43.478 0.00 0.00 0.00 3.02
2148 2586 4.217550 CCAAAATTGTGTAATGGACCGAGT 59.782 41.667 0.00 0.00 32.82 4.18
2236 2674 6.931840 GGTACTGGATTAGTGGATCAGATTTC 59.068 42.308 0.00 0.00 40.65 2.17
2260 2698 2.478292 ACGGGTATCACCTTTCAGGAT 58.522 47.619 0.00 0.00 37.67 3.24
2390 2828 0.920664 GTTTTGCCGCTTTGACACAC 59.079 50.000 0.00 0.00 0.00 3.82
2467 2905 4.693532 ATCGTTGTGATGTGGCGT 57.306 50.000 0.00 0.00 35.45 5.68
2495 2933 1.290009 GACACATTGCAGGCCAACC 59.710 57.895 5.01 0.00 35.99 3.77
2521 2959 3.342269 CGTGTATTCTGCAAATACGTGC 58.658 45.455 18.47 0.00 45.15 5.34
2567 3005 8.934169 CGATGACGTGGCAAAACGAAGTTTAT 62.934 42.308 12.04 0.00 46.77 1.40
2769 3208 2.480419 GCGATGTGTCAAGCAGTAAGTT 59.520 45.455 0.00 0.00 0.00 2.66
2868 3307 6.699575 AATCTGGTTTAGAATGGCACATAC 57.300 37.500 0.00 0.00 39.63 2.39
2904 3343 5.852282 AAAATGTAGTTCAACCTGCACTT 57.148 34.783 0.00 0.00 29.62 3.16
3079 3520 5.772393 TGTCCTATTCTTTTCCTTGGCTA 57.228 39.130 0.00 0.00 0.00 3.93
3188 3629 7.093945 GGGCAAGATGACAAAAGTCCTAATTTA 60.094 37.037 0.00 0.00 0.00 1.40
3189 3630 7.970614 GGCAAGATGACAAAAGTCCTAATTTAG 59.029 37.037 0.00 0.00 0.00 1.85
3190 3631 7.486232 GCAAGATGACAAAAGTCCTAATTTAGC 59.514 37.037 0.00 0.00 0.00 3.09
3191 3632 8.734386 CAAGATGACAAAAGTCCTAATTTAGCT 58.266 33.333 0.00 0.00 0.00 3.32
3192 3633 9.959721 AAGATGACAAAAGTCCTAATTTAGCTA 57.040 29.630 0.00 0.00 0.00 3.32
3193 3634 9.606631 AGATGACAAAAGTCCTAATTTAGCTAG 57.393 33.333 0.00 0.00 0.00 3.42
3194 3635 9.384764 GATGACAAAAGTCCTAATTTAGCTAGT 57.615 33.333 0.00 0.00 0.00 2.57
3196 3637 9.649167 TGACAAAAGTCCTAATTTAGCTAGTAC 57.351 33.333 0.00 0.00 0.00 2.73
3197 3638 9.872721 GACAAAAGTCCTAATTTAGCTAGTACT 57.127 33.333 0.00 0.00 0.00 2.73
3198 3639 9.872721 ACAAAAGTCCTAATTTAGCTAGTACTC 57.127 33.333 0.00 0.00 0.00 2.59
3199 3640 9.315525 CAAAAGTCCTAATTTAGCTAGTACTCC 57.684 37.037 0.00 0.00 0.00 3.85
3200 3641 7.600231 AAGTCCTAATTTAGCTAGTACTCCC 57.400 40.000 0.00 0.00 0.00 4.30
3201 3642 6.924801 AGTCCTAATTTAGCTAGTACTCCCT 58.075 40.000 0.00 0.00 0.00 4.20
3202 3643 7.005902 AGTCCTAATTTAGCTAGTACTCCCTC 58.994 42.308 0.00 0.00 0.00 4.30
3203 3644 6.209192 GTCCTAATTTAGCTAGTACTCCCTCC 59.791 46.154 0.00 0.00 0.00 4.30
3204 3645 5.183522 CCTAATTTAGCTAGTACTCCCTCCG 59.816 48.000 0.00 0.00 0.00 4.63
3205 3646 3.659183 TTTAGCTAGTACTCCCTCCGT 57.341 47.619 0.00 0.00 0.00 4.69
3206 3647 3.659183 TTAGCTAGTACTCCCTCCGTT 57.341 47.619 0.00 0.00 0.00 4.44
3207 3648 2.055684 AGCTAGTACTCCCTCCGTTC 57.944 55.000 0.00 0.00 0.00 3.95
3208 3649 1.031235 GCTAGTACTCCCTCCGTTCC 58.969 60.000 0.00 0.00 0.00 3.62
3209 3650 1.307097 CTAGTACTCCCTCCGTTCCG 58.693 60.000 0.00 0.00 0.00 4.30
3210 3651 0.911769 TAGTACTCCCTCCGTTCCGA 59.088 55.000 0.00 0.00 0.00 4.55
3211 3652 0.038744 AGTACTCCCTCCGTTCCGAA 59.961 55.000 0.00 0.00 0.00 4.30
3212 3653 1.109609 GTACTCCCTCCGTTCCGAAT 58.890 55.000 0.00 0.00 0.00 3.34
3213 3654 1.479730 GTACTCCCTCCGTTCCGAATT 59.520 52.381 0.00 0.00 0.00 2.17
3214 3655 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
3215 3656 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
3216 3657 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
3217 3658 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
3218 3659 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3219 3660 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3220 3661 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3221 3662 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
3222 3663 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
3223 3664 3.991773 TCCGTTCCGAATTACTTGTCTTG 59.008 43.478 0.00 0.00 0.00 3.02
3224 3665 3.124636 CCGTTCCGAATTACTTGTCTTGG 59.875 47.826 0.00 0.00 0.00 3.61
3225 3666 3.991773 CGTTCCGAATTACTTGTCTTGGA 59.008 43.478 0.00 0.00 0.00 3.53
3226 3667 4.630069 CGTTCCGAATTACTTGTCTTGGAT 59.370 41.667 0.00 0.00 0.00 3.41
3227 3668 5.121768 CGTTCCGAATTACTTGTCTTGGATT 59.878 40.000 0.00 0.00 0.00 3.01
3228 3669 6.348213 CGTTCCGAATTACTTGTCTTGGATTT 60.348 38.462 0.00 0.00 0.00 2.17
3229 3670 6.494893 TCCGAATTACTTGTCTTGGATTTG 57.505 37.500 0.00 0.00 0.00 2.32
3230 3671 6.001460 TCCGAATTACTTGTCTTGGATTTGT 58.999 36.000 0.00 0.00 0.00 2.83
3231 3672 6.148811 TCCGAATTACTTGTCTTGGATTTGTC 59.851 38.462 0.00 0.00 0.00 3.18
3232 3673 6.149474 CCGAATTACTTGTCTTGGATTTGTCT 59.851 38.462 0.00 0.00 0.00 3.41
3233 3674 7.333423 CCGAATTACTTGTCTTGGATTTGTCTA 59.667 37.037 0.00 0.00 0.00 2.59
3234 3675 8.383619 CGAATTACTTGTCTTGGATTTGTCTAG 58.616 37.037 0.00 0.00 0.00 2.43
3235 3676 9.436957 GAATTACTTGTCTTGGATTTGTCTAGA 57.563 33.333 0.00 0.00 0.00 2.43
3236 3677 9.965902 AATTACTTGTCTTGGATTTGTCTAGAT 57.034 29.630 0.00 0.00 0.00 1.98
3238 3679 9.871238 TTACTTGTCTTGGATTTGTCTAGATAC 57.129 33.333 0.00 0.00 0.00 2.24
3239 3680 7.036220 ACTTGTCTTGGATTTGTCTAGATACG 58.964 38.462 0.00 0.00 0.00 3.06
3240 3681 5.902681 TGTCTTGGATTTGTCTAGATACGG 58.097 41.667 0.00 0.00 0.00 4.02
3241 3682 5.655090 TGTCTTGGATTTGTCTAGATACGGA 59.345 40.000 0.00 0.00 0.00 4.69
3242 3683 6.323996 TGTCTTGGATTTGTCTAGATACGGAT 59.676 38.462 0.00 0.00 0.00 4.18
3243 3684 6.642950 GTCTTGGATTTGTCTAGATACGGATG 59.357 42.308 0.00 0.00 0.00 3.51
3244 3685 6.323996 TCTTGGATTTGTCTAGATACGGATGT 59.676 38.462 0.00 0.00 0.00 3.06
3245 3686 7.504574 TCTTGGATTTGTCTAGATACGGATGTA 59.495 37.037 0.00 0.00 34.45 2.29
3246 3687 7.776618 TGGATTTGTCTAGATACGGATGTAT 57.223 36.000 0.00 0.00 43.97 2.29
3262 3703 8.466617 ACGGATGTATCTAGACTCATTTTAGT 57.533 34.615 11.25 7.70 0.00 2.24
3263 3704 8.353684 ACGGATGTATCTAGACTCATTTTAGTG 58.646 37.037 11.25 3.85 0.00 2.74
3264 3705 7.327275 CGGATGTATCTAGACTCATTTTAGTGC 59.673 40.741 11.25 0.00 0.00 4.40
3265 3706 8.364142 GGATGTATCTAGACTCATTTTAGTGCT 58.636 37.037 11.25 0.00 0.00 4.40
3268 3709 9.628500 TGTATCTAGACTCATTTTAGTGCTAGA 57.372 33.333 0.00 0.00 38.76 2.43
3272 3713 9.069082 TCTAGACTCATTTTAGTGCTAGATACC 57.931 37.037 0.00 0.00 34.69 2.73
3273 3714 7.906199 AGACTCATTTTAGTGCTAGATACCT 57.094 36.000 0.00 0.00 0.00 3.08
3274 3715 7.947282 AGACTCATTTTAGTGCTAGATACCTC 58.053 38.462 0.00 0.00 0.00 3.85
3275 3716 7.014808 AGACTCATTTTAGTGCTAGATACCTCC 59.985 40.741 0.00 0.00 0.00 4.30
3276 3717 6.085555 TCATTTTAGTGCTAGATACCTCCG 57.914 41.667 0.00 0.00 0.00 4.63
3277 3718 5.597182 TCATTTTAGTGCTAGATACCTCCGT 59.403 40.000 0.00 0.00 0.00 4.69
3278 3719 6.774170 TCATTTTAGTGCTAGATACCTCCGTA 59.226 38.462 0.00 0.00 0.00 4.02
3279 3720 7.450634 TCATTTTAGTGCTAGATACCTCCGTAT 59.549 37.037 0.00 0.00 37.92 3.06
3295 3736 8.763984 ACCTCCGTATCTAGAAAAATCTAAGA 57.236 34.615 0.00 0.00 0.00 2.10
3296 3737 8.631797 ACCTCCGTATCTAGAAAAATCTAAGAC 58.368 37.037 0.00 0.00 0.00 3.01
3297 3738 8.630917 CCTCCGTATCTAGAAAAATCTAAGACA 58.369 37.037 0.00 0.00 0.00 3.41
3300 3741 9.804758 CCGTATCTAGAAAAATCTAAGACAAGT 57.195 33.333 0.00 0.00 0.00 3.16
3308 3749 9.720769 AGAAAAATCTAAGACAAGTAATTCGGA 57.279 29.630 0.00 0.00 0.00 4.55
3349 3790 4.632153 AGTAGCACCAACTGTAACTTCAG 58.368 43.478 0.00 0.00 40.80 3.02
3522 3963 4.142403 GCATGTCCTTGCAGCATTTTAGTA 60.142 41.667 0.00 0.00 42.31 1.82
3567 4008 4.475944 GGAATATGGTTTATGCGATGTGC 58.524 43.478 0.00 0.00 46.70 4.57
3603 4044 5.766150 TTCTCATTGTGGGTGTTTTAGTG 57.234 39.130 0.00 0.00 0.00 2.74
3661 4102 3.588955 TGATGTCTCAATCCTGTTGTCG 58.411 45.455 0.00 0.00 0.00 4.35
3769 4210 1.070601 GCAAATGGTCAAACCTGCCTT 59.929 47.619 0.00 0.00 39.58 4.35
3898 4339 6.910536 AGCACTTGCAGTAATAATAGACAC 57.089 37.500 3.62 0.00 45.16 3.67
3928 4369 4.798882 ACCCTTGGTTTAACAGATTGTGA 58.201 39.130 0.00 0.00 27.29 3.58
3954 4395 9.915629 ATTGCGGTAATTTTGTTATTTCAGTTA 57.084 25.926 0.00 0.00 0.00 2.24
4000 4442 1.472376 GCAGAGCACCTCATAGTGTCC 60.472 57.143 0.00 0.00 40.04 4.02
4084 4526 5.301805 TGAAAATTTGTCTCCTTTCTGTCCC 59.698 40.000 0.00 0.00 0.00 4.46
4167 4610 3.701532 TGCACGGGTTTTTCAAACTAG 57.298 42.857 0.00 0.00 0.00 2.57
4254 4979 1.834263 AGAGGTCACCAACTGATAGCC 59.166 52.381 0.00 0.00 0.00 3.93
4280 5005 3.988976 TTTCTAGCCAGTGAGCTGATT 57.011 42.857 14.24 0.00 45.28 2.57
4290 5015 6.485984 AGCCAGTGAGCTGATTGAATAATAAG 59.514 38.462 0.00 0.00 45.28 1.73
4291 5016 6.293845 GCCAGTGAGCTGATTGAATAATAAGG 60.294 42.308 0.00 0.00 45.28 2.69
4292 5017 6.769822 CCAGTGAGCTGATTGAATAATAAGGT 59.230 38.462 0.00 0.00 45.28 3.50
4293 5018 7.933577 CCAGTGAGCTGATTGAATAATAAGGTA 59.066 37.037 0.00 0.00 45.28 3.08
4295 5020 8.709308 AGTGAGCTGATTGAATAATAAGGTAGT 58.291 33.333 0.00 0.00 35.97 2.73
4297 5022 8.704668 TGAGCTGATTGAATAATAAGGTAGTGA 58.295 33.333 0.00 0.00 35.97 3.41
4298 5023 9.202273 GAGCTGATTGAATAATAAGGTAGTGAG 57.798 37.037 0.00 0.00 35.97 3.51
4299 5024 7.659390 AGCTGATTGAATAATAAGGTAGTGAGC 59.341 37.037 0.00 0.00 34.44 4.26
4300 5025 7.659390 GCTGATTGAATAATAAGGTAGTGAGCT 59.341 37.037 0.00 0.00 33.85 4.09
4301 5026 8.893219 TGATTGAATAATAAGGTAGTGAGCTG 57.107 34.615 0.00 0.00 32.39 4.24
4303 5028 9.717942 GATTGAATAATAAGGTAGTGAGCTGAT 57.282 33.333 0.00 0.00 32.39 2.90
4305 5030 8.893219 TGAATAATAAGGTAGTGAGCTGATTG 57.107 34.615 0.00 0.00 35.41 2.67
4307 5032 9.547753 GAATAATAAGGTAGTGAGCTGATTGAA 57.452 33.333 0.00 0.00 35.41 2.69
4321 5052 9.639563 TGAGCTGATTGAATAATAAATGGGTAA 57.360 29.630 0.00 0.00 0.00 2.85
4360 5091 6.486253 CACCTATTGGAATTGGACATATCG 57.514 41.667 0.00 0.00 35.62 2.92
4479 5221 7.235606 TCCTGGCATGGTATTAGGATATATAGC 59.764 40.741 0.00 0.00 32.85 2.97
4504 5246 2.217750 TGTGTGGTTATGTGCAGTGTC 58.782 47.619 0.00 0.00 0.00 3.67
4516 5258 3.003480 GTGCAGTGTCAAATACTCCCTC 58.997 50.000 0.00 0.00 0.00 4.30
4528 5270 9.444600 GTCAAATACTCCCTCTGTAAACAAATA 57.555 33.333 0.00 0.00 0.00 1.40
4529 5271 9.444600 TCAAATACTCCCTCTGTAAACAAATAC 57.555 33.333 0.00 0.00 0.00 1.89
4530 5272 8.674607 CAAATACTCCCTCTGTAAACAAATACC 58.325 37.037 0.00 0.00 0.00 2.73
4643 5392 6.200475 GGACTATTGTTTACTATGCTTCCGTC 59.800 42.308 0.00 0.00 0.00 4.79
4836 5586 4.502016 ACGTATCTCACTAACGAGACAGA 58.498 43.478 0.63 0.00 44.59 3.41
4841 5591 2.755655 CTCACTAACGAGACAGACCCAT 59.244 50.000 0.00 0.00 34.79 4.00
4950 5700 7.147976 TCATGATCAGACAATTAGTACATCGG 58.852 38.462 0.09 0.00 0.00 4.18
4961 5711 2.168496 AGTACATCGGGGGATCATACG 58.832 52.381 0.00 0.00 0.00 3.06
5087 5837 7.749126 ACTGTTACTTCGTTTTTCTTCTTGTTG 59.251 33.333 0.00 0.00 0.00 3.33
5088 5838 7.586747 TGTTACTTCGTTTTTCTTCTTGTTGT 58.413 30.769 0.00 0.00 0.00 3.32
5089 5839 8.719648 TGTTACTTCGTTTTTCTTCTTGTTGTA 58.280 29.630 0.00 0.00 0.00 2.41
5090 5840 8.992832 GTTACTTCGTTTTTCTTCTTGTTGTAC 58.007 33.333 0.00 0.00 0.00 2.90
5091 5841 7.136289 ACTTCGTTTTTCTTCTTGTTGTACA 57.864 32.000 0.00 0.00 0.00 2.90
5102 5852 8.797266 TCTTCTTGTTGTACAGTATATATGCG 57.203 34.615 0.00 0.00 0.00 4.73
5165 5915 2.092267 AGCATGCCATGGTTATGTCTCA 60.092 45.455 23.39 9.24 37.84 3.27
5266 6028 2.010582 GCACAAAACTTGCCGGGTGA 62.011 55.000 2.18 0.00 33.58 4.02
5296 6058 1.402613 GGCGGCCGTTATTATTGTTGT 59.597 47.619 28.70 0.00 0.00 3.32
5297 6059 2.613133 GGCGGCCGTTATTATTGTTGTA 59.387 45.455 28.70 0.00 0.00 2.41
5298 6060 3.546616 GGCGGCCGTTATTATTGTTGTAC 60.547 47.826 28.70 3.09 0.00 2.90
5300 6062 4.784079 GCGGCCGTTATTATTGTTGTACTG 60.784 45.833 28.70 0.00 0.00 2.74
5301 6063 4.330620 CGGCCGTTATTATTGTTGTACTGT 59.669 41.667 19.50 0.00 0.00 3.55
5372 6164 7.552848 GCATACGGCAAATTTAGATGTAATG 57.447 36.000 0.00 0.00 43.97 1.90
5414 7944 7.009815 TCCGTTATACTGTCACGATTGAAAATC 59.990 37.037 8.24 0.00 35.93 2.17
5416 7946 8.328146 CGTTATACTGTCACGATTGAAAATCAT 58.672 33.333 0.00 0.00 35.93 2.45
5546 8106 0.532862 CCAGCAACGGTTCACTCTGT 60.533 55.000 0.00 0.00 0.00 3.41
5548 8108 0.597637 AGCAACGGTTCACTCTGTCG 60.598 55.000 0.00 0.00 0.00 4.35
5594 8154 2.284263 TTGCAGTGATGTCTCTAGCG 57.716 50.000 0.00 0.00 0.00 4.26
5597 8157 1.535015 GCAGTGATGTCTCTAGCGGAC 60.535 57.143 0.00 8.20 0.00 4.79
5598 8158 2.020720 CAGTGATGTCTCTAGCGGACT 58.979 52.381 13.88 3.66 35.04 3.85
5644 8204 0.675837 GGGCTGTTAACCGAGGAACC 60.676 60.000 2.48 0.00 0.00 3.62
5653 8213 1.670083 CCGAGGAACCGGTGGAAAC 60.670 63.158 8.52 0.00 44.23 2.78
5654 8214 1.670083 CGAGGAACCGGTGGAAACC 60.670 63.158 8.52 7.40 0.00 3.27
5690 8250 4.586235 GGCGCATATGCTGGGGGT 62.586 66.667 24.56 0.00 38.22 4.95
5691 8251 2.429930 GCGCATATGCTGGGGGTA 59.570 61.111 24.56 0.00 38.22 3.69
5692 8252 1.228124 GCGCATATGCTGGGGGTAA 60.228 57.895 24.56 0.00 38.22 2.85
5693 8253 0.821711 GCGCATATGCTGGGGGTAAA 60.822 55.000 24.56 0.00 38.22 2.01
5694 8254 1.686355 CGCATATGCTGGGGGTAAAA 58.314 50.000 24.56 0.00 39.32 1.52
5695 8255 2.238521 CGCATATGCTGGGGGTAAAAT 58.761 47.619 24.56 0.00 39.32 1.82
5696 8256 2.627699 CGCATATGCTGGGGGTAAAATT 59.372 45.455 24.56 0.00 39.32 1.82
5697 8257 3.823873 CGCATATGCTGGGGGTAAAATTA 59.176 43.478 24.56 0.00 39.32 1.40
5698 8258 4.279671 CGCATATGCTGGGGGTAAAATTAA 59.720 41.667 24.56 0.00 39.32 1.40
5699 8259 5.538118 GCATATGCTGGGGGTAAAATTAAC 58.462 41.667 20.64 0.00 38.21 2.01
5700 8260 5.069781 GCATATGCTGGGGGTAAAATTAACA 59.930 40.000 20.64 0.00 38.21 2.41
5701 8261 6.407525 GCATATGCTGGGGGTAAAATTAACAA 60.408 38.462 20.64 0.00 38.21 2.83
5702 8262 7.560368 CATATGCTGGGGGTAAAATTAACAAA 58.440 34.615 0.00 0.00 0.00 2.83
5703 8263 6.634889 ATGCTGGGGGTAAAATTAACAAAT 57.365 33.333 0.00 0.00 0.00 2.32
5704 8264 6.441088 TGCTGGGGGTAAAATTAACAAATT 57.559 33.333 0.00 0.00 0.00 1.82
5705 8265 6.842676 TGCTGGGGGTAAAATTAACAAATTT 58.157 32.000 0.00 0.00 34.09 1.82
5706 8266 7.974504 TGCTGGGGGTAAAATTAACAAATTTA 58.025 30.769 0.00 0.00 32.51 1.40
5707 8267 8.437575 TGCTGGGGGTAAAATTAACAAATTTAA 58.562 29.630 0.00 0.00 32.51 1.52
5708 8268 8.723311 GCTGGGGGTAAAATTAACAAATTTAAC 58.277 33.333 0.00 0.00 32.51 2.01
5709 8269 9.221933 CTGGGGGTAAAATTAACAAATTTAACC 57.778 33.333 5.36 5.36 42.87 2.85
5710 8270 8.946248 TGGGGGTAAAATTAACAAATTTAACCT 58.054 29.630 11.44 0.00 43.06 3.50
5729 8289 9.834628 TTTAACCTATGAACGAAATCAAATCAC 57.165 29.630 0.00 0.00 32.06 3.06
5730 8290 7.447374 AACCTATGAACGAAATCAAATCACA 57.553 32.000 0.00 0.00 32.06 3.58
5731 8291 7.076842 ACCTATGAACGAAATCAAATCACAG 57.923 36.000 0.00 0.00 32.06 3.66
5732 8292 6.878923 ACCTATGAACGAAATCAAATCACAGA 59.121 34.615 0.00 0.00 32.06 3.41
5733 8293 7.390440 ACCTATGAACGAAATCAAATCACAGAA 59.610 33.333 0.00 0.00 32.06 3.02
5734 8294 8.400947 CCTATGAACGAAATCAAATCACAGAAT 58.599 33.333 0.00 0.00 32.06 2.40
5735 8295 9.218359 CTATGAACGAAATCAAATCACAGAATG 57.782 33.333 0.00 0.00 35.72 2.67
5736 8296 7.200778 TGAACGAAATCAAATCACAGAATGA 57.799 32.000 0.00 0.00 43.13 2.57
5737 8297 7.647228 TGAACGAAATCAAATCACAGAATGAA 58.353 30.769 0.00 0.00 41.93 2.57
5738 8298 7.591057 TGAACGAAATCAAATCACAGAATGAAC 59.409 33.333 0.00 0.00 41.93 3.18
5739 8299 7.206981 ACGAAATCAAATCACAGAATGAACT 57.793 32.000 0.00 0.00 41.93 3.01
5740 8300 7.080099 ACGAAATCAAATCACAGAATGAACTG 58.920 34.615 0.00 0.00 41.93 3.16
5748 8308 3.469008 ACAGAATGAACTGTCCGTGAA 57.531 42.857 0.00 0.00 46.36 3.18
5749 8309 3.804036 ACAGAATGAACTGTCCGTGAAA 58.196 40.909 0.00 0.00 46.36 2.69
5750 8310 3.560068 ACAGAATGAACTGTCCGTGAAAC 59.440 43.478 0.00 0.00 46.36 2.78
5751 8311 3.809832 CAGAATGAACTGTCCGTGAAACT 59.190 43.478 0.00 0.00 39.69 2.66
5752 8312 4.988540 CAGAATGAACTGTCCGTGAAACTA 59.011 41.667 0.00 0.00 39.69 2.24
5753 8313 5.639506 CAGAATGAACTGTCCGTGAAACTAT 59.360 40.000 0.00 0.00 39.69 2.12
5754 8314 6.811665 CAGAATGAACTGTCCGTGAAACTATA 59.188 38.462 0.00 0.00 39.69 1.31
5755 8315 7.492669 CAGAATGAACTGTCCGTGAAACTATAT 59.507 37.037 0.00 0.00 39.69 0.86
5756 8316 7.707035 AGAATGAACTGTCCGTGAAACTATATC 59.293 37.037 0.00 0.00 31.75 1.63
5757 8317 6.275494 TGAACTGTCCGTGAAACTATATCA 57.725 37.500 0.00 0.00 31.75 2.15
5758 8318 6.097356 TGAACTGTCCGTGAAACTATATCAC 58.903 40.000 0.00 0.00 42.94 3.06
5765 8325 4.677683 GTGAAACTATATCACGCGACTG 57.322 45.455 15.93 0.27 37.98 3.51
5766 8326 4.348656 GTGAAACTATATCACGCGACTGA 58.651 43.478 15.93 7.69 37.98 3.41
5767 8327 4.204573 GTGAAACTATATCACGCGACTGAC 59.795 45.833 15.93 0.00 37.98 3.51
5768 8328 3.351020 AACTATATCACGCGACTGACC 57.649 47.619 15.93 0.00 0.00 4.02
5769 8329 2.573369 ACTATATCACGCGACTGACCT 58.427 47.619 15.93 0.41 0.00 3.85
5770 8330 2.950309 ACTATATCACGCGACTGACCTT 59.050 45.455 15.93 0.00 0.00 3.50
5771 8331 2.493713 ATATCACGCGACTGACCTTC 57.506 50.000 15.93 0.00 0.00 3.46
5772 8332 0.098200 TATCACGCGACTGACCTTCG 59.902 55.000 15.93 0.00 39.56 3.79
5773 8333 1.863662 ATCACGCGACTGACCTTCGT 61.864 55.000 15.93 0.00 38.77 3.85
5775 8335 2.050351 CGCGACTGACCTTCGTGT 60.050 61.111 0.00 0.00 41.11 4.49
5776 8336 2.365068 CGCGACTGACCTTCGTGTG 61.365 63.158 0.00 0.00 41.11 3.82
5777 8337 1.299926 GCGACTGACCTTCGTGTGT 60.300 57.895 0.00 0.00 38.77 3.72
5778 8338 1.548973 GCGACTGACCTTCGTGTGTG 61.549 60.000 0.00 0.00 38.77 3.82
5779 8339 0.030235 CGACTGACCTTCGTGTGTGA 59.970 55.000 0.00 0.00 0.00 3.58
5780 8340 1.488527 GACTGACCTTCGTGTGTGAC 58.511 55.000 0.00 0.00 0.00 3.67
5788 8348 4.702020 CGTGTGTGACGTCTGACA 57.298 55.556 17.92 15.63 43.50 3.58
5789 8349 2.204491 CGTGTGTGACGTCTGACAC 58.796 57.895 27.28 27.28 43.50 3.67
5808 8368 1.767289 CGAAAGCGTCACACTACACT 58.233 50.000 0.00 0.00 0.00 3.55
5809 8369 1.452025 CGAAAGCGTCACACTACACTG 59.548 52.381 0.00 0.00 0.00 3.66
5810 8370 2.470821 GAAAGCGTCACACTACACTGT 58.529 47.619 0.00 0.00 0.00 3.55
5811 8371 1.852942 AAGCGTCACACTACACTGTG 58.147 50.000 6.19 6.19 42.62 3.66
5812 8372 0.597637 AGCGTCACACTACACTGTGC 60.598 55.000 7.90 0.00 41.27 4.57
5813 8373 0.874175 GCGTCACACTACACTGTGCA 60.874 55.000 7.90 0.00 41.27 4.57
5814 8374 1.566404 CGTCACACTACACTGTGCAA 58.434 50.000 7.90 0.00 41.27 4.08
5815 8375 1.257936 CGTCACACTACACTGTGCAAC 59.742 52.381 7.90 0.00 41.27 4.17
5816 8376 1.257936 GTCACACTACACTGTGCAACG 59.742 52.381 7.90 0.00 42.39 4.10
5817 8377 0.042188 CACACTACACTGTGCAACGC 60.042 55.000 7.90 0.00 42.39 4.84
5818 8378 1.157870 ACACTACACTGTGCAACGCC 61.158 55.000 7.90 0.00 42.39 5.68
5819 8379 0.880278 CACTACACTGTGCAACGCCT 60.880 55.000 7.90 0.00 42.39 5.52
5820 8380 0.600255 ACTACACTGTGCAACGCCTC 60.600 55.000 7.90 0.00 42.39 4.70
5821 8381 1.617755 CTACACTGTGCAACGCCTCG 61.618 60.000 7.90 0.00 42.39 4.63
5822 8382 4.374702 CACTGTGCAACGCCTCGC 62.375 66.667 0.00 0.00 42.39 5.03
5823 8383 4.908687 ACTGTGCAACGCCTCGCA 62.909 61.111 0.00 0.00 42.39 5.10
5824 8384 4.081030 CTGTGCAACGCCTCGCAG 62.081 66.667 0.00 0.00 42.39 5.18
5825 8385 4.600576 TGTGCAACGCCTCGCAGA 62.601 61.111 0.00 0.00 42.39 4.26
5826 8386 3.121030 GTGCAACGCCTCGCAGAT 61.121 61.111 0.00 0.00 39.20 2.90
5827 8387 1.809619 GTGCAACGCCTCGCAGATA 60.810 57.895 0.00 0.00 39.20 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 3.307480 GGTGCTTGGAACTTTAGCCTCTA 60.307 47.826 0.00 0.00 34.03 2.43
92 93 3.028130 GCCTCAAGACTAGTTCTAGCCT 58.972 50.000 0.00 0.00 32.51 4.58
98 99 7.731882 AAGTTTTTAGCCTCAAGACTAGTTC 57.268 36.000 0.00 0.00 0.00 3.01
136 137 9.617053 AGAGGGCTAATACATATTTTAGTAGGT 57.383 33.333 0.00 0.00 0.00 3.08
157 159 5.832060 AGGCATTAAATGATGAAAGAGAGGG 59.168 40.000 0.00 0.00 0.00 4.30
165 167 8.686334 GTTAAAGGAGAGGCATTAAATGATGAA 58.314 33.333 0.00 0.00 0.00 2.57
168 170 7.615365 TGTGTTAAAGGAGAGGCATTAAATGAT 59.385 33.333 0.00 0.00 0.00 2.45
177 179 2.436417 GCATGTGTTAAAGGAGAGGCA 58.564 47.619 0.00 0.00 0.00 4.75
178 180 1.398390 CGCATGTGTTAAAGGAGAGGC 59.602 52.381 0.00 0.00 0.00 4.70
195 197 0.250234 CCTCCAATCCAGAACTCGCA 59.750 55.000 0.00 0.00 0.00 5.10
268 270 0.685458 GCCCCACTCATGCTTGGATT 60.685 55.000 12.71 0.00 34.46 3.01
280 282 2.375509 ACTAAAACTTGCTAGCCCCACT 59.624 45.455 13.29 0.00 0.00 4.00
284 286 2.290705 TGGGACTAAAACTTGCTAGCCC 60.291 50.000 13.29 1.26 34.57 5.19
373 375 9.774413 AGCGCTAATACATATTTTAGTAGGTTT 57.226 29.630 8.99 0.00 0.00 3.27
375 377 8.804204 AGAGCGCTAATACATATTTTAGTAGGT 58.196 33.333 11.50 0.00 0.00 3.08
387 390 5.907207 TGAAAAGAGAGAGCGCTAATACAT 58.093 37.500 11.50 0.00 0.00 2.29
390 393 8.942338 TTAAATGAAAAGAGAGAGCGCTAATA 57.058 30.769 11.50 0.00 0.00 0.98
396 399 7.279758 AGAGGAATTAAATGAAAAGAGAGAGCG 59.720 37.037 0.00 0.00 0.00 5.03
397 400 8.504812 AGAGGAATTAAATGAAAAGAGAGAGC 57.495 34.615 0.00 0.00 0.00 4.09
430 433 4.635765 CCTTCAATCCAGAACTCGCATTTA 59.364 41.667 0.00 0.00 0.00 1.40
432 435 3.012518 CCTTCAATCCAGAACTCGCATT 58.987 45.455 0.00 0.00 0.00 3.56
450 453 6.443832 AGCATTTATTATCCTCCAAACCCTT 58.556 36.000 0.00 0.00 0.00 3.95
491 494 7.577303 TGCTTGGATCCAAATACTAAAGAGAT 58.423 34.615 26.87 0.00 35.33 2.75
556 559 5.104859 TGCTTGGATACGTTTTAGTCCCATA 60.105 40.000 0.00 0.00 42.51 2.74
619 622 4.800471 GCTGCCGGAAATTCAAAGATAAAG 59.200 41.667 5.05 0.00 0.00 1.85
659 663 5.177142 CAGTTAATGATGCTGCTAGCTAGTG 59.823 44.000 21.62 15.32 42.97 2.74
714 718 4.598894 CCCGGCTCGCCTGATCAG 62.599 72.222 16.24 16.24 0.00 2.90
795 799 0.906756 TCTCTCCTTCCTGTGGGCTG 60.907 60.000 0.00 0.00 0.00 4.85
797 801 0.616111 TCTCTCTCCTTCCTGTGGGC 60.616 60.000 0.00 0.00 0.00 5.36
798 802 1.484038 CTCTCTCTCCTTCCTGTGGG 58.516 60.000 0.00 0.00 0.00 4.61
801 805 0.682855 CCGCTCTCTCTCCTTCCTGT 60.683 60.000 0.00 0.00 0.00 4.00
802 806 2.015227 GCCGCTCTCTCTCCTTCCTG 62.015 65.000 0.00 0.00 0.00 3.86
803 807 1.756561 GCCGCTCTCTCTCCTTCCT 60.757 63.158 0.00 0.00 0.00 3.36
804 808 2.015227 CTGCCGCTCTCTCTCCTTCC 62.015 65.000 0.00 0.00 0.00 3.46
805 809 1.034838 TCTGCCGCTCTCTCTCCTTC 61.035 60.000 0.00 0.00 0.00 3.46
806 810 0.613292 TTCTGCCGCTCTCTCTCCTT 60.613 55.000 0.00 0.00 0.00 3.36
811 821 0.875474 GATGCTTCTGCCGCTCTCTC 60.875 60.000 0.00 0.00 38.71 3.20
812 822 1.143620 GATGCTTCTGCCGCTCTCT 59.856 57.895 0.00 0.00 38.71 3.10
819 829 1.647629 CGCTGATGATGCTTCTGCC 59.352 57.895 0.88 0.00 38.71 4.85
837 847 3.621892 CTTTGCCTTCGCTGCTGCC 62.622 63.158 10.24 0.00 35.36 4.85
932 956 1.681486 CCTTCTCGAAGCTCCTCCCC 61.681 65.000 1.13 0.00 37.11 4.81
935 959 1.134936 GGAACCTTCTCGAAGCTCCTC 60.135 57.143 14.17 0.00 36.63 3.71
936 960 0.899019 GGAACCTTCTCGAAGCTCCT 59.101 55.000 14.17 0.00 36.63 3.69
1233 1258 2.571611 CAAATGTCGTGCTCGCGC 60.572 61.111 0.00 0.00 36.96 6.86
1277 1302 2.365635 ATCACGGGACAGGGGAGG 60.366 66.667 0.00 0.00 0.00 4.30
1353 1755 2.532531 AGCAAAATCGCATCAAGACG 57.467 45.000 0.00 0.00 0.00 4.18
1354 1756 6.875926 AATAAAGCAAAATCGCATCAAGAC 57.124 33.333 0.00 0.00 0.00 3.01
1380 1783 1.987855 TCTGCCCCTCAACTACCCG 60.988 63.158 0.00 0.00 0.00 5.28
1419 1850 5.046529 CACAATTTCACCACAAAATTCGGA 58.953 37.500 0.00 0.00 34.84 4.55
1440 1871 0.584876 AACTAACGAAACAGCGGCAC 59.415 50.000 1.45 0.00 35.12 5.01
1460 1891 4.856801 CGCCAGGCCGCCACTAAT 62.857 66.667 13.15 0.00 0.00 1.73
1497 1928 1.719780 CTTGTCGTTCTTCTACCGTGC 59.280 52.381 0.00 0.00 0.00 5.34
1522 1953 3.712881 GAGCCACGAAAAGCGCGT 61.713 61.111 8.43 0.00 46.04 6.01
1608 2040 1.676529 GCCATACGACACTAGAGCTCA 59.323 52.381 17.77 0.82 0.00 4.26
1709 2141 6.093219 CCAAATGAAAAACACATCAAACCACA 59.907 34.615 0.00 0.00 0.00 4.17
1725 2157 5.967088 TCTTTCGAACAAACCCAAATGAAA 58.033 33.333 0.00 0.00 0.00 2.69
1784 2216 9.706691 TCGATGAACTTCTAATTTCAAACTACT 57.293 29.630 0.41 0.00 35.42 2.57
1787 2219 8.669243 GGATCGATGAACTTCTAATTTCAAACT 58.331 33.333 0.54 0.00 35.42 2.66
1817 2249 2.439409 CACCCATCAATTGCTGTGAGA 58.561 47.619 8.38 0.00 31.68 3.27
1885 2317 8.331740 CCATTGGGATGTGGAGATTATTATACT 58.668 37.037 0.00 0.00 37.72 2.12
1886 2318 7.067494 GCCATTGGGATGTGGAGATTATTATAC 59.933 40.741 4.53 0.00 37.72 1.47
1887 2319 7.118723 GCCATTGGGATGTGGAGATTATTATA 58.881 38.462 4.53 0.00 37.72 0.98
1888 2320 5.954150 GCCATTGGGATGTGGAGATTATTAT 59.046 40.000 4.53 0.00 37.72 1.28
1889 2321 5.163001 TGCCATTGGGATGTGGAGATTATTA 60.163 40.000 4.53 0.00 37.72 0.98
1891 2323 3.140707 TGCCATTGGGATGTGGAGATTAT 59.859 43.478 4.53 0.00 37.72 1.28
2001 2436 3.157087 CACACCAGCAACCCTAATTTCT 58.843 45.455 0.00 0.00 0.00 2.52
2018 2455 1.103398 AAAGCAGCAGGACCACACAC 61.103 55.000 0.00 0.00 0.00 3.82
2021 2458 0.764890 AGTAAAGCAGCAGGACCACA 59.235 50.000 0.00 0.00 0.00 4.17
2119 2557 4.770010 TCCATTACACAATTTTGGACCTCC 59.230 41.667 0.00 0.00 31.67 4.30
2148 2586 2.484770 GGCAAGGACCATCGCATACTTA 60.485 50.000 0.00 0.00 0.00 2.24
2236 2674 3.328382 TGAAAGGTGATACCCGTTCAG 57.672 47.619 4.77 0.00 44.53 3.02
2260 2698 5.243507 ACACATTTAAAGGACACATGCATCA 59.756 36.000 6.90 0.00 0.00 3.07
2390 2828 6.939551 AAAATGCAATTCAAAGTGAGATCG 57.060 33.333 0.00 0.00 33.67 3.69
2450 2888 0.796312 GAACGCCACATCACAACGAT 59.204 50.000 0.00 0.00 33.27 3.73
2467 2905 3.745975 CCTGCAATGTGTCGAGTAAAGAA 59.254 43.478 0.00 0.00 0.00 2.52
2495 2933 1.164411 TTTGCAGAATACACGCCCAG 58.836 50.000 0.00 0.00 0.00 4.45
2521 2959 3.430565 TAGCATCTGCCGCGTCAGG 62.431 63.158 18.07 2.97 43.38 3.86
2567 3005 1.409064 CACAGCCGGTCTCTGCTAATA 59.591 52.381 1.90 0.00 35.69 0.98
2769 3208 0.032403 AATCGTTCGGGTGACGTGAA 59.968 50.000 0.00 0.00 44.69 3.18
2937 3376 6.864685 CCTTGTACGTTACAATACACTGAGAA 59.135 38.462 0.00 0.00 46.51 2.87
3188 3629 1.409942 GGAACGGAGGGAGTACTAGCT 60.410 57.143 0.00 0.00 0.00 3.32
3189 3630 1.031235 GGAACGGAGGGAGTACTAGC 58.969 60.000 0.00 0.00 0.00 3.42
3204 3645 6.496338 AATCCAAGACAAGTAATTCGGAAC 57.504 37.500 0.00 0.00 0.00 3.62
3205 3646 6.488683 ACAAATCCAAGACAAGTAATTCGGAA 59.511 34.615 0.00 0.00 0.00 4.30
3206 3647 6.001460 ACAAATCCAAGACAAGTAATTCGGA 58.999 36.000 0.00 0.00 0.00 4.55
3207 3648 6.149474 AGACAAATCCAAGACAAGTAATTCGG 59.851 38.462 0.00 0.00 0.00 4.30
3208 3649 7.133891 AGACAAATCCAAGACAAGTAATTCG 57.866 36.000 0.00 0.00 0.00 3.34
3209 3650 9.436957 TCTAGACAAATCCAAGACAAGTAATTC 57.563 33.333 0.00 0.00 0.00 2.17
3210 3651 9.965902 ATCTAGACAAATCCAAGACAAGTAATT 57.034 29.630 0.00 0.00 0.00 1.40
3212 3653 9.871238 GTATCTAGACAAATCCAAGACAAGTAA 57.129 33.333 0.00 0.00 0.00 2.24
3213 3654 8.188799 CGTATCTAGACAAATCCAAGACAAGTA 58.811 37.037 0.00 0.00 0.00 2.24
3214 3655 7.036220 CGTATCTAGACAAATCCAAGACAAGT 58.964 38.462 0.00 0.00 0.00 3.16
3215 3656 6.477033 CCGTATCTAGACAAATCCAAGACAAG 59.523 42.308 0.00 0.00 0.00 3.16
3216 3657 6.153851 TCCGTATCTAGACAAATCCAAGACAA 59.846 38.462 0.00 0.00 0.00 3.18
3217 3658 5.655090 TCCGTATCTAGACAAATCCAAGACA 59.345 40.000 0.00 0.00 0.00 3.41
3218 3659 6.145338 TCCGTATCTAGACAAATCCAAGAC 57.855 41.667 0.00 0.00 0.00 3.01
3219 3660 6.323996 ACATCCGTATCTAGACAAATCCAAGA 59.676 38.462 0.00 0.00 0.00 3.02
3220 3661 6.516718 ACATCCGTATCTAGACAAATCCAAG 58.483 40.000 0.00 0.00 0.00 3.61
3221 3662 6.479972 ACATCCGTATCTAGACAAATCCAA 57.520 37.500 0.00 0.00 0.00 3.53
3222 3663 7.776618 ATACATCCGTATCTAGACAAATCCA 57.223 36.000 0.00 0.00 32.66 3.41
3236 3677 9.570468 ACTAAAATGAGTCTAGATACATCCGTA 57.430 33.333 12.66 6.93 0.00 4.02
3237 3678 8.353684 CACTAAAATGAGTCTAGATACATCCGT 58.646 37.037 12.66 7.10 0.00 4.69
3238 3679 7.327275 GCACTAAAATGAGTCTAGATACATCCG 59.673 40.741 12.66 6.68 0.00 4.18
3239 3680 8.364142 AGCACTAAAATGAGTCTAGATACATCC 58.636 37.037 12.66 0.00 0.00 3.51
3242 3683 9.628500 TCTAGCACTAAAATGAGTCTAGATACA 57.372 33.333 0.00 0.00 34.65 2.29
3246 3687 9.069082 GGTATCTAGCACTAAAATGAGTCTAGA 57.931 37.037 11.59 11.59 38.76 2.43
3247 3688 9.073475 AGGTATCTAGCACTAAAATGAGTCTAG 57.927 37.037 0.00 0.00 33.29 2.43
3248 3689 8.998277 AGGTATCTAGCACTAAAATGAGTCTA 57.002 34.615 0.00 0.00 0.00 2.59
3249 3690 7.014808 GGAGGTATCTAGCACTAAAATGAGTCT 59.985 40.741 0.00 0.00 0.00 3.24
3250 3691 7.149307 GGAGGTATCTAGCACTAAAATGAGTC 58.851 42.308 0.00 0.00 0.00 3.36
3251 3692 6.239064 CGGAGGTATCTAGCACTAAAATGAGT 60.239 42.308 0.00 0.00 0.00 3.41
3252 3693 6.153067 CGGAGGTATCTAGCACTAAAATGAG 58.847 44.000 0.00 0.00 0.00 2.90
3253 3694 5.597182 ACGGAGGTATCTAGCACTAAAATGA 59.403 40.000 0.00 0.00 0.00 2.57
3254 3695 5.844004 ACGGAGGTATCTAGCACTAAAATG 58.156 41.667 0.00 0.00 0.00 2.32
3255 3696 7.778185 ATACGGAGGTATCTAGCACTAAAAT 57.222 36.000 0.00 0.00 34.18 1.82
3269 3710 9.857656 TCTTAGATTTTTCTAGATACGGAGGTA 57.142 33.333 0.00 0.00 0.00 3.08
3270 3711 8.631797 GTCTTAGATTTTTCTAGATACGGAGGT 58.368 37.037 0.00 0.00 0.00 3.85
3271 3712 8.630917 TGTCTTAGATTTTTCTAGATACGGAGG 58.369 37.037 0.00 0.00 0.00 4.30
3274 3715 9.804758 ACTTGTCTTAGATTTTTCTAGATACGG 57.195 33.333 0.00 0.00 0.00 4.02
3282 3723 9.720769 TCCGAATTACTTGTCTTAGATTTTTCT 57.279 29.630 0.00 0.00 0.00 2.52
3285 3726 8.440833 CGTTCCGAATTACTTGTCTTAGATTTT 58.559 33.333 0.00 0.00 0.00 1.82
3286 3727 7.064253 CCGTTCCGAATTACTTGTCTTAGATTT 59.936 37.037 0.00 0.00 0.00 2.17
3287 3728 6.534079 CCGTTCCGAATTACTTGTCTTAGATT 59.466 38.462 0.00 0.00 0.00 2.40
3288 3729 6.040878 CCGTTCCGAATTACTTGTCTTAGAT 58.959 40.000 0.00 0.00 0.00 1.98
3289 3730 5.183713 TCCGTTCCGAATTACTTGTCTTAGA 59.816 40.000 0.00 0.00 0.00 2.10
3290 3731 5.404946 TCCGTTCCGAATTACTTGTCTTAG 58.595 41.667 0.00 0.00 0.00 2.18
3291 3732 5.389859 TCCGTTCCGAATTACTTGTCTTA 57.610 39.130 0.00 0.00 0.00 2.10
3292 3733 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
3293 3734 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
3294 3735 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3295 3736 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3296 3737 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3297 3738 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
3298 3739 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
3299 3740 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
3300 3741 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
3301 3742 1.755380 CTACTCCCTCCGTTCCGAATT 59.245 52.381 0.00 0.00 0.00 2.17
3302 3743 1.400737 CTACTCCCTCCGTTCCGAAT 58.599 55.000 0.00 0.00 0.00 3.34
3303 3744 1.318158 GCTACTCCCTCCGTTCCGAA 61.318 60.000 0.00 0.00 0.00 4.30
3304 3745 1.751927 GCTACTCCCTCCGTTCCGA 60.752 63.158 0.00 0.00 0.00 4.55
3305 3746 1.392710 ATGCTACTCCCTCCGTTCCG 61.393 60.000 0.00 0.00 0.00 4.30
3306 3747 1.700955 TATGCTACTCCCTCCGTTCC 58.299 55.000 0.00 0.00 0.00 3.62
3307 3748 3.132467 ACTTTATGCTACTCCCTCCGTTC 59.868 47.826 0.00 0.00 0.00 3.95
3308 3749 3.105283 ACTTTATGCTACTCCCTCCGTT 58.895 45.455 0.00 0.00 0.00 4.44
3309 3750 2.748388 ACTTTATGCTACTCCCTCCGT 58.252 47.619 0.00 0.00 0.00 4.69
3310 3751 3.305471 GCTACTTTATGCTACTCCCTCCG 60.305 52.174 0.00 0.00 0.00 4.63
3311 3752 3.641906 TGCTACTTTATGCTACTCCCTCC 59.358 47.826 0.00 0.00 0.00 4.30
3312 3753 4.501743 GGTGCTACTTTATGCTACTCCCTC 60.502 50.000 0.00 0.00 0.00 4.30
3316 3757 5.292101 CAGTTGGTGCTACTTTATGCTACTC 59.708 44.000 0.00 0.00 0.00 2.59
3349 3790 3.119814 TCGTCACTGCTCATCAGACTAAC 60.120 47.826 0.00 0.00 45.72 2.34
3359 3800 1.256812 TCTTGGATCGTCACTGCTCA 58.743 50.000 0.00 0.00 0.00 4.26
3522 3963 2.026641 CATTTCACCTTGGATGCCGAT 58.973 47.619 0.00 0.00 0.00 4.18
3567 4008 5.530171 CACAATGAGAATCCTTGGATACTGG 59.470 44.000 2.20 0.00 43.76 4.00
3603 4044 0.592148 CGACTATAGTCAGGGTCGGC 59.408 60.000 28.00 3.44 44.99 5.54
3751 4192 3.323691 GGTTAAGGCAGGTTTGACCATTT 59.676 43.478 0.00 0.00 41.95 2.32
3769 4210 3.410631 TCTCGTTGGCATTGAAGGTTA 57.589 42.857 0.00 0.00 0.00 2.85
3898 4339 4.211920 TGTTAAACCAAGGGTTGAGAAGG 58.788 43.478 0.67 0.00 46.20 3.46
3928 4369 8.825667 AACTGAAATAACAAAATTACCGCAAT 57.174 26.923 0.00 0.00 0.00 3.56
4000 4442 5.233957 TCACATATTTTCACAAGCATCGG 57.766 39.130 0.00 0.00 0.00 4.18
4113 4555 7.158099 ACAATAAAGTGATGAAGTAAAGGCC 57.842 36.000 0.00 0.00 0.00 5.19
4167 4610 0.878416 TGCATCAAGGTTACGCCAAC 59.122 50.000 0.00 0.00 40.61 3.77
4254 4979 2.863137 GCTCACTGGCTAGAAATTCTCG 59.137 50.000 3.17 0.00 0.00 4.04
4280 5005 8.704668 TCAATCAGCTCACTACCTTATTATTCA 58.295 33.333 0.00 0.00 0.00 2.57
4292 5017 9.288576 CCCATTTATTATTCAATCAGCTCACTA 57.711 33.333 0.00 0.00 0.00 2.74
4293 5018 7.781693 ACCCATTTATTATTCAATCAGCTCACT 59.218 33.333 0.00 0.00 0.00 3.41
4295 5020 9.639563 TTACCCATTTATTATTCAATCAGCTCA 57.360 29.630 0.00 0.00 0.00 4.26
4297 5022 9.866655 TCTTACCCATTTATTATTCAATCAGCT 57.133 29.630 0.00 0.00 0.00 4.24
4321 5052 0.602905 GGTGGCGCAGTGTTAGTTCT 60.603 55.000 10.83 0.00 0.00 3.01
4360 5091 4.708177 AGATGTGATATGGCAACCTACAC 58.292 43.478 0.00 0.00 0.00 2.90
4398 5136 3.695060 TGAGACCTAGTAGTTGTAGCTGC 59.305 47.826 0.00 0.00 0.00 5.25
4459 5201 9.645059 CATTCGGCTATATATCCTAATACCATG 57.355 37.037 2.93 0.00 0.00 3.66
4479 5221 1.809547 TGCACATAACCACACATTCGG 59.190 47.619 0.00 0.00 0.00 4.30
4504 5246 8.674607 GGTATTTGTTTACAGAGGGAGTATTTG 58.325 37.037 0.00 0.00 0.00 2.32
4568 5310 7.980099 ACTCCCTCTGTAAACAAATATAAGACG 59.020 37.037 0.00 0.00 0.00 4.18
4643 5392 2.902484 GCTGCGTATCAAACTTGTTTCG 59.098 45.455 0.00 0.00 0.00 3.46
4836 5586 2.042930 GGGGAGGAGGTCATGGGT 59.957 66.667 0.00 0.00 0.00 4.51
4841 5591 1.388531 GAGACAGGGGAGGAGGTCA 59.611 63.158 0.00 0.00 32.79 4.02
4961 5711 1.538687 TTTCCCCTCCGGACGTTCTC 61.539 60.000 0.00 0.00 41.83 2.87
5087 5837 6.090493 TCAGAGACGACGCATATATACTGTAC 59.910 42.308 0.00 0.00 0.00 2.90
5088 5838 6.161381 TCAGAGACGACGCATATATACTGTA 58.839 40.000 0.00 0.00 0.00 2.74
5089 5839 4.995487 TCAGAGACGACGCATATATACTGT 59.005 41.667 0.00 0.00 0.00 3.55
5090 5840 5.532025 TCAGAGACGACGCATATATACTG 57.468 43.478 0.00 0.00 0.00 2.74
5091 5841 6.547283 CAATCAGAGACGACGCATATATACT 58.453 40.000 0.00 0.00 0.00 2.12
5102 5852 2.677199 TCAACAGCAATCAGAGACGAC 58.323 47.619 0.00 0.00 0.00 4.34
5165 5915 0.527565 GCGAACCATGCAAATCACCT 59.472 50.000 0.00 0.00 0.00 4.00
5237 5987 0.039618 AGTTTTGTGCATCCCCGGAT 59.960 50.000 0.73 0.00 34.81 4.18
5292 6054 9.630098 ATTCATTTTCAATCATGACAGTACAAC 57.370 29.630 0.00 0.00 34.61 3.32
5382 6174 6.193514 TCGTGACAGTATAACGGACATAAA 57.806 37.500 3.75 0.00 37.87 1.40
5388 7918 4.968812 TCAATCGTGACAGTATAACGGA 57.031 40.909 3.75 0.00 37.87 4.69
5389 7919 6.397831 TTTTCAATCGTGACAGTATAACGG 57.602 37.500 3.75 0.00 37.87 4.44
5394 7924 7.042725 CGGTATGATTTTCAATCGTGACAGTAT 60.043 37.037 2.06 0.00 31.90 2.12
5400 7930 3.311322 GCCGGTATGATTTTCAATCGTGA 59.689 43.478 1.90 0.00 0.00 4.35
5401 7931 3.617669 GCCGGTATGATTTTCAATCGTG 58.382 45.455 1.90 0.00 0.00 4.35
5403 7933 2.349438 CCGCCGGTATGATTTTCAATCG 60.349 50.000 1.90 0.00 0.00 3.34
5546 8106 3.379445 GAGTCGCCTGAACCCCGA 61.379 66.667 0.00 0.00 0.00 5.14
5548 8108 4.452733 CCGAGTCGCCTGAACCCC 62.453 72.222 7.12 0.00 0.00 4.95
5594 8154 1.590792 GTGTGCGCGGGTATAGTCC 60.591 63.158 8.83 0.00 0.00 3.85
5597 8157 1.657487 CTCGTGTGCGCGGGTATAG 60.657 63.158 8.83 0.00 38.14 1.31
5598 8158 2.410060 CTCGTGTGCGCGGGTATA 59.590 61.111 8.83 0.00 38.14 1.47
5627 8187 1.017701 CCGGTTCCTCGGTTAACAGC 61.018 60.000 8.10 0.00 44.60 4.40
5637 8197 4.391869 GGTTTCCACCGGTTCCTC 57.608 61.111 2.97 0.00 31.60 3.71
5646 8206 3.058224 CGAATCCAACAAGAGGTTTCCAC 60.058 47.826 0.00 0.00 37.72 4.02
5653 8213 1.359848 CGGTCGAATCCAACAAGAGG 58.640 55.000 0.00 0.00 0.00 3.69
5654 8214 1.359848 CCGGTCGAATCCAACAAGAG 58.640 55.000 0.00 0.00 0.00 2.85
5703 8263 9.834628 GTGATTTGATTTCGTTCATAGGTTAAA 57.165 29.630 0.00 0.00 0.00 1.52
5704 8264 9.004717 TGTGATTTGATTTCGTTCATAGGTTAA 57.995 29.630 0.00 0.00 0.00 2.01
5705 8265 8.554835 TGTGATTTGATTTCGTTCATAGGTTA 57.445 30.769 0.00 0.00 0.00 2.85
5706 8266 7.390440 TCTGTGATTTGATTTCGTTCATAGGTT 59.610 33.333 0.00 0.00 0.00 3.50
5707 8267 6.878923 TCTGTGATTTGATTTCGTTCATAGGT 59.121 34.615 0.00 0.00 0.00 3.08
5708 8268 7.307493 TCTGTGATTTGATTTCGTTCATAGG 57.693 36.000 0.00 0.00 0.00 2.57
5709 8269 9.218359 CATTCTGTGATTTGATTTCGTTCATAG 57.782 33.333 0.00 0.00 0.00 2.23
5710 8270 8.945057 TCATTCTGTGATTTGATTTCGTTCATA 58.055 29.630 0.00 0.00 0.00 2.15
5711 8271 7.819644 TCATTCTGTGATTTGATTTCGTTCAT 58.180 30.769 0.00 0.00 0.00 2.57
5712 8272 7.200778 TCATTCTGTGATTTGATTTCGTTCA 57.799 32.000 0.00 0.00 0.00 3.18
5713 8273 7.805071 AGTTCATTCTGTGATTTGATTTCGTTC 59.195 33.333 0.00 0.00 36.54 3.95
5714 8274 7.592533 CAGTTCATTCTGTGATTTGATTTCGTT 59.407 33.333 0.00 0.00 36.54 3.85
5715 8275 7.080099 CAGTTCATTCTGTGATTTGATTTCGT 58.920 34.615 0.00 0.00 36.54 3.85
5716 8276 7.080099 ACAGTTCATTCTGTGATTTGATTTCG 58.920 34.615 0.00 0.00 45.40 3.46
5717 8277 7.540055 GGACAGTTCATTCTGTGATTTGATTTC 59.460 37.037 4.06 0.00 46.81 2.17
5718 8278 7.373493 GGACAGTTCATTCTGTGATTTGATTT 58.627 34.615 4.06 0.00 46.81 2.17
5719 8279 6.348786 CGGACAGTTCATTCTGTGATTTGATT 60.349 38.462 4.06 0.00 46.81 2.57
5720 8280 5.122869 CGGACAGTTCATTCTGTGATTTGAT 59.877 40.000 4.06 0.00 46.81 2.57
5721 8281 4.452114 CGGACAGTTCATTCTGTGATTTGA 59.548 41.667 4.06 0.00 46.81 2.69
5722 8282 4.214119 ACGGACAGTTCATTCTGTGATTTG 59.786 41.667 4.06 0.00 46.81 2.32
5723 8283 4.389374 ACGGACAGTTCATTCTGTGATTT 58.611 39.130 4.06 0.00 46.81 2.17
5724 8284 4.008074 ACGGACAGTTCATTCTGTGATT 57.992 40.909 4.06 0.00 46.81 2.57
5725 8285 3.685139 ACGGACAGTTCATTCTGTGAT 57.315 42.857 4.06 0.00 46.81 3.06
5727 8287 2.754472 TCACGGACAGTTCATTCTGTG 58.246 47.619 4.06 4.48 46.81 3.66
5729 8289 3.809832 AGTTTCACGGACAGTTCATTCTG 59.190 43.478 0.00 0.00 40.80 3.02
5730 8290 4.073293 AGTTTCACGGACAGTTCATTCT 57.927 40.909 0.00 0.00 0.00 2.40
5731 8291 7.491372 TGATATAGTTTCACGGACAGTTCATTC 59.509 37.037 0.00 0.00 0.00 2.67
5732 8292 7.277981 GTGATATAGTTTCACGGACAGTTCATT 59.722 37.037 0.00 0.00 34.67 2.57
5733 8293 6.757010 GTGATATAGTTTCACGGACAGTTCAT 59.243 38.462 0.00 0.00 34.67 2.57
5734 8294 6.097356 GTGATATAGTTTCACGGACAGTTCA 58.903 40.000 0.00 0.00 34.67 3.18
5735 8295 6.570690 GTGATATAGTTTCACGGACAGTTC 57.429 41.667 0.00 0.00 34.67 3.01
5744 8304 4.204573 GTCAGTCGCGTGATATAGTTTCAC 59.795 45.833 5.77 0.00 40.06 3.18
5745 8305 4.348656 GTCAGTCGCGTGATATAGTTTCA 58.651 43.478 5.77 0.00 0.00 2.69
5746 8306 3.729716 GGTCAGTCGCGTGATATAGTTTC 59.270 47.826 5.77 0.00 0.00 2.78
5747 8307 3.380637 AGGTCAGTCGCGTGATATAGTTT 59.619 43.478 5.77 0.00 0.00 2.66
5748 8308 2.950309 AGGTCAGTCGCGTGATATAGTT 59.050 45.455 5.77 0.00 0.00 2.24
5749 8309 2.573369 AGGTCAGTCGCGTGATATAGT 58.427 47.619 5.77 0.00 0.00 2.12
5750 8310 3.556513 GAAGGTCAGTCGCGTGATATAG 58.443 50.000 5.77 0.00 0.00 1.31
5751 8311 2.032290 CGAAGGTCAGTCGCGTGATATA 60.032 50.000 5.77 0.00 0.00 0.86
5752 8312 1.268589 CGAAGGTCAGTCGCGTGATAT 60.269 52.381 5.77 0.00 0.00 1.63
5753 8313 0.098200 CGAAGGTCAGTCGCGTGATA 59.902 55.000 5.77 0.00 0.00 2.15
5754 8314 1.154016 CGAAGGTCAGTCGCGTGAT 60.154 57.895 5.77 0.00 0.00 3.06
5755 8315 2.254350 CGAAGGTCAGTCGCGTGA 59.746 61.111 5.77 0.00 0.00 4.35
5756 8316 2.050351 ACGAAGGTCAGTCGCGTG 60.050 61.111 5.77 0.00 42.27 5.34
5757 8317 2.050351 CACGAAGGTCAGTCGCGT 60.050 61.111 5.77 0.00 42.27 6.01
5758 8318 2.050351 ACACGAAGGTCAGTCGCG 60.050 61.111 0.00 0.00 42.27 5.87
5759 8319 1.299926 ACACACGAAGGTCAGTCGC 60.300 57.895 0.00 0.00 42.27 5.19
5760 8320 0.030235 TCACACACGAAGGTCAGTCG 59.970 55.000 0.00 0.00 44.10 4.18
5761 8321 1.488527 GTCACACACGAAGGTCAGTC 58.511 55.000 0.00 0.00 0.00 3.51
5762 8322 3.661745 GTCACACACGAAGGTCAGT 57.338 52.632 0.00 0.00 0.00 3.41
5772 8332 2.204491 CGTGTCAGACGTCACACAC 58.796 57.895 28.27 27.99 42.67 3.82
5773 8333 4.702020 CGTGTCAGACGTCACACA 57.298 55.556 28.27 21.89 42.67 3.72
5789 8349 1.452025 CAGTGTAGTGTGACGCTTTCG 59.548 52.381 3.14 0.00 38.10 3.46
5790 8350 2.470821 ACAGTGTAGTGTGACGCTTTC 58.529 47.619 3.14 0.00 38.10 2.62
5791 8351 2.596904 ACAGTGTAGTGTGACGCTTT 57.403 45.000 3.14 0.00 38.10 3.51
5799 8359 1.157870 GGCGTTGCACAGTGTAGTGT 61.158 55.000 1.61 0.00 41.52 3.55
5800 8360 0.880278 AGGCGTTGCACAGTGTAGTG 60.880 55.000 1.61 0.00 42.37 2.74
5801 8361 0.600255 GAGGCGTTGCACAGTGTAGT 60.600 55.000 1.61 0.00 0.00 2.73
5802 8362 1.617755 CGAGGCGTTGCACAGTGTAG 61.618 60.000 1.61 0.00 0.00 2.74
5803 8363 1.663388 CGAGGCGTTGCACAGTGTA 60.663 57.895 1.61 0.00 0.00 2.90
5804 8364 2.967076 CGAGGCGTTGCACAGTGT 60.967 61.111 1.61 0.00 0.00 3.55
5805 8365 4.374702 GCGAGGCGTTGCACAGTG 62.375 66.667 13.75 0.00 32.59 3.66
5806 8366 4.908687 TGCGAGGCGTTGCACAGT 62.909 61.111 17.22 0.00 38.24 3.55
5807 8367 4.081030 CTGCGAGGCGTTGCACAG 62.081 66.667 17.22 5.41 38.24 3.66
5808 8368 2.499756 TATCTGCGAGGCGTTGCACA 62.500 55.000 17.22 8.16 38.24 4.57
5809 8369 1.809619 TATCTGCGAGGCGTTGCAC 60.810 57.895 17.22 0.00 38.24 4.57
5810 8370 2.576526 TATCTGCGAGGCGTTGCA 59.423 55.556 19.70 19.70 41.13 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.