Multiple sequence alignment - TraesCS2A01G162800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G162800 chr2A 100.000 3333 0 0 1 3333 115129352 115132684 0.000000e+00 6156
1 TraesCS2A01G162800 chr2A 97.248 2725 70 3 614 3333 769227587 769230311 0.000000e+00 4612
2 TraesCS2A01G162800 chr5A 97.069 2729 73 4 611 3333 650150476 650153203 0.000000e+00 4590
3 TraesCS2A01G162800 chr5A 94.686 621 24 2 2615 3227 647553084 647553703 0.000000e+00 955
4 TraesCS2A01G162800 chr5A 81.959 582 90 13 41 614 520755935 520755361 2.330000e-131 479
5 TraesCS2A01G162800 chr4A 96.805 2723 84 3 613 3333 604389452 604386731 0.000000e+00 4543
6 TraesCS2A01G162800 chr4A 91.069 2676 162 29 614 3227 521945178 521947838 0.000000e+00 3546
7 TraesCS2A01G162800 chr6A 96.774 2728 76 6 614 3333 162654340 162657063 0.000000e+00 4540
8 TraesCS2A01G162800 chr3A 97.147 2489 59 5 614 3100 636533535 636531057 0.000000e+00 4193
9 TraesCS2A01G162800 chr4B 92.024 2683 131 26 614 3230 657805506 657802841 0.000000e+00 3692
10 TraesCS2A01G162800 chr5D 91.393 2556 154 41 614 3132 408555343 408552817 0.000000e+00 3441
11 TraesCS2A01G162800 chr7D 91.347 2554 163 35 614 3132 92234551 92232021 0.000000e+00 3439
12 TraesCS2A01G162800 chr7D 91.408 2549 157 37 614 3132 631818588 631816072 0.000000e+00 3437
13 TraesCS2A01G162800 chr5B 92.825 1575 65 20 1718 3260 69032176 69033734 0.000000e+00 2239
14 TraesCS2A01G162800 chr1B 94.066 1028 59 2 614 1639 460164087 460163060 0.000000e+00 1559
15 TraesCS2A01G162800 chr1B 93.732 1021 62 2 614 1632 544798310 544797290 0.000000e+00 1530
16 TraesCS2A01G162800 chr1B 92.308 104 7 1 3137 3240 460161660 460161558 2.680000e-31 147
17 TraesCS2A01G162800 chr1B 92.308 104 7 1 3137 3240 544795871 544795769 2.680000e-31 147
18 TraesCS2A01G162800 chr2B 94.146 1025 57 3 614 1636 69351989 69353012 0.000000e+00 1557
19 TraesCS2A01G162800 chr6B 93.567 1026 63 3 614 1636 661538893 661539918 0.000000e+00 1526
20 TraesCS2A01G162800 chr6B 84.053 301 38 8 41 334 21988119 21988416 7.040000e-72 281


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G162800 chr2A 115129352 115132684 3332 False 6156.0 6156 100.000 1 3333 1 chr2A.!!$F1 3332
1 TraesCS2A01G162800 chr2A 769227587 769230311 2724 False 4612.0 4612 97.248 614 3333 1 chr2A.!!$F2 2719
2 TraesCS2A01G162800 chr5A 650150476 650153203 2727 False 4590.0 4590 97.069 611 3333 1 chr5A.!!$F2 2722
3 TraesCS2A01G162800 chr5A 647553084 647553703 619 False 955.0 955 94.686 2615 3227 1 chr5A.!!$F1 612
4 TraesCS2A01G162800 chr5A 520755361 520755935 574 True 479.0 479 81.959 41 614 1 chr5A.!!$R1 573
5 TraesCS2A01G162800 chr4A 604386731 604389452 2721 True 4543.0 4543 96.805 613 3333 1 chr4A.!!$R1 2720
6 TraesCS2A01G162800 chr4A 521945178 521947838 2660 False 3546.0 3546 91.069 614 3227 1 chr4A.!!$F1 2613
7 TraesCS2A01G162800 chr6A 162654340 162657063 2723 False 4540.0 4540 96.774 614 3333 1 chr6A.!!$F1 2719
8 TraesCS2A01G162800 chr3A 636531057 636533535 2478 True 4193.0 4193 97.147 614 3100 1 chr3A.!!$R1 2486
9 TraesCS2A01G162800 chr4B 657802841 657805506 2665 True 3692.0 3692 92.024 614 3230 1 chr4B.!!$R1 2616
10 TraesCS2A01G162800 chr5D 408552817 408555343 2526 True 3441.0 3441 91.393 614 3132 1 chr5D.!!$R1 2518
11 TraesCS2A01G162800 chr7D 92232021 92234551 2530 True 3439.0 3439 91.347 614 3132 1 chr7D.!!$R1 2518
12 TraesCS2A01G162800 chr7D 631816072 631818588 2516 True 3437.0 3437 91.408 614 3132 1 chr7D.!!$R2 2518
13 TraesCS2A01G162800 chr5B 69032176 69033734 1558 False 2239.0 2239 92.825 1718 3260 1 chr5B.!!$F1 1542
14 TraesCS2A01G162800 chr1B 460161558 460164087 2529 True 853.0 1559 93.187 614 3240 2 chr1B.!!$R1 2626
15 TraesCS2A01G162800 chr1B 544795769 544798310 2541 True 838.5 1530 93.020 614 3240 2 chr1B.!!$R2 2626
16 TraesCS2A01G162800 chr2B 69351989 69353012 1023 False 1557.0 1557 94.146 614 1636 1 chr2B.!!$F1 1022
17 TraesCS2A01G162800 chr6B 661538893 661539918 1025 False 1526.0 1526 93.567 614 1636 1 chr6B.!!$F2 1022

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
471 472 0.034380 ACAAGCAGCAGCAGATGGAT 60.034 50.0 3.17 0.0 45.49 3.41 F
544 545 0.036010 CTTGCCAGATCCGACACCTT 60.036 55.0 0.00 0.0 0.00 3.50 F
545 546 0.036388 TTGCCAGATCCGACACCTTC 60.036 55.0 0.00 0.0 0.00 3.46 F
548 549 0.108138 CCAGATCCGACACCTTCCAC 60.108 60.0 0.00 0.0 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1368 1423 0.040204 CCACAGAAAAGGGGCTCCAT 59.960 55.000 4.79 0.0 34.83 3.41 R
1489 1544 0.912486 GCATCTAACCTGGACTGGGT 59.088 55.000 0.00 0.0 38.94 4.51 R
1869 1936 5.755849 ACTCCTTCTCAAACTTTTCCTTGA 58.244 37.500 0.00 0.0 0.00 3.02 R
2649 2782 3.426615 CACTAAGCCCAATTACCCACAA 58.573 45.455 0.00 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.933155 CTCGTGTATGTGAATGGCTTC 57.067 47.619 0.00 0.00 0.00 3.86
21 22 2.267426 TCGTGTATGTGAATGGCTTCG 58.733 47.619 0.00 0.00 33.86 3.79
22 23 2.094442 TCGTGTATGTGAATGGCTTCGA 60.094 45.455 0.00 0.00 33.86 3.71
23 24 2.866156 CGTGTATGTGAATGGCTTCGAT 59.134 45.455 0.00 0.00 33.86 3.59
24 25 3.309682 CGTGTATGTGAATGGCTTCGATT 59.690 43.478 0.00 0.00 33.86 3.34
25 26 4.591202 GTGTATGTGAATGGCTTCGATTG 58.409 43.478 0.00 0.00 33.86 2.67
26 27 4.094887 GTGTATGTGAATGGCTTCGATTGT 59.905 41.667 0.00 0.00 33.86 2.71
27 28 5.293324 GTGTATGTGAATGGCTTCGATTGTA 59.707 40.000 0.00 0.00 33.86 2.41
28 29 4.882671 ATGTGAATGGCTTCGATTGTAC 57.117 40.909 0.00 0.00 33.86 2.90
29 30 3.937814 TGTGAATGGCTTCGATTGTACT 58.062 40.909 0.00 0.00 33.86 2.73
30 31 3.932710 TGTGAATGGCTTCGATTGTACTC 59.067 43.478 0.00 0.00 33.86 2.59
31 32 3.932710 GTGAATGGCTTCGATTGTACTCA 59.067 43.478 0.00 0.00 33.86 3.41
32 33 4.033358 GTGAATGGCTTCGATTGTACTCAG 59.967 45.833 0.00 0.00 33.86 3.35
33 34 3.895232 ATGGCTTCGATTGTACTCAGT 57.105 42.857 0.00 0.00 0.00 3.41
34 35 3.678056 TGGCTTCGATTGTACTCAGTT 57.322 42.857 0.00 0.00 0.00 3.16
35 36 4.794278 TGGCTTCGATTGTACTCAGTTA 57.206 40.909 0.00 0.00 0.00 2.24
36 37 5.142061 TGGCTTCGATTGTACTCAGTTAA 57.858 39.130 0.00 0.00 0.00 2.01
37 38 5.543714 TGGCTTCGATTGTACTCAGTTAAA 58.456 37.500 0.00 0.00 0.00 1.52
38 39 5.992829 TGGCTTCGATTGTACTCAGTTAAAA 59.007 36.000 0.00 0.00 0.00 1.52
39 40 6.483974 TGGCTTCGATTGTACTCAGTTAAAAA 59.516 34.615 0.00 0.00 0.00 1.94
62 63 8.815565 AAAAACAGGACCCAAATAAAAACATT 57.184 26.923 0.00 0.00 0.00 2.71
63 64 9.907229 AAAAACAGGACCCAAATAAAAACATTA 57.093 25.926 0.00 0.00 0.00 1.90
64 65 8.896320 AAACAGGACCCAAATAAAAACATTAC 57.104 30.769 0.00 0.00 0.00 1.89
65 66 7.604657 ACAGGACCCAAATAAAAACATTACA 57.395 32.000 0.00 0.00 0.00 2.41
66 67 8.024145 ACAGGACCCAAATAAAAACATTACAA 57.976 30.769 0.00 0.00 0.00 2.41
67 68 7.929245 ACAGGACCCAAATAAAAACATTACAAC 59.071 33.333 0.00 0.00 0.00 3.32
68 69 8.147704 CAGGACCCAAATAAAAACATTACAACT 58.852 33.333 0.00 0.00 0.00 3.16
69 70 9.369672 AGGACCCAAATAAAAACATTACAACTA 57.630 29.630 0.00 0.00 0.00 2.24
70 71 9.984190 GGACCCAAATAAAAACATTACAACTAA 57.016 29.630 0.00 0.00 0.00 2.24
89 90 8.148999 ACAACTAACTCCTTAACTTCTACAAGG 58.851 37.037 0.00 0.00 40.23 3.61
90 91 8.365647 CAACTAACTCCTTAACTTCTACAAGGA 58.634 37.037 2.55 2.55 44.32 3.36
91 92 8.488308 ACTAACTCCTTAACTTCTACAAGGAA 57.512 34.615 4.04 0.00 45.45 3.36
92 93 8.586744 ACTAACTCCTTAACTTCTACAAGGAAG 58.413 37.037 4.04 0.00 45.45 3.46
93 94 7.613551 AACTCCTTAACTTCTACAAGGAAGA 57.386 36.000 10.60 0.00 45.45 2.87
94 95 6.995364 ACTCCTTAACTTCTACAAGGAAGAC 58.005 40.000 10.60 0.00 45.45 3.01
95 96 6.014413 ACTCCTTAACTTCTACAAGGAAGACC 60.014 42.308 10.60 0.00 45.45 3.85
96 97 6.211785 CTCCTTAACTTCTACAAGGAAGACCT 59.788 42.308 10.60 0.00 45.45 3.85
97 98 7.577998 CTCCTTAACTTCTACAAGGAAGACCTC 60.578 44.444 10.60 0.00 45.45 3.85
105 106 3.365536 AGGAAGACCTCGAGCTGAA 57.634 52.632 6.99 0.00 44.13 3.02
106 107 1.633774 AGGAAGACCTCGAGCTGAAA 58.366 50.000 6.99 0.00 44.13 2.69
107 108 1.548269 AGGAAGACCTCGAGCTGAAAG 59.452 52.381 6.99 0.00 44.13 2.62
123 124 3.963665 TGAAAGCAAGAAACGTGATTGG 58.036 40.909 9.01 0.00 0.00 3.16
124 125 3.243367 TGAAAGCAAGAAACGTGATTGGG 60.243 43.478 9.01 0.00 0.00 4.12
125 126 1.981256 AGCAAGAAACGTGATTGGGT 58.019 45.000 9.01 0.00 0.00 4.51
126 127 1.880027 AGCAAGAAACGTGATTGGGTC 59.120 47.619 9.01 0.00 0.00 4.46
127 128 1.068541 GCAAGAAACGTGATTGGGTCC 60.069 52.381 9.01 0.00 0.00 4.46
128 129 2.504367 CAAGAAACGTGATTGGGTCCT 58.496 47.619 0.00 0.00 0.00 3.85
129 130 2.884639 CAAGAAACGTGATTGGGTCCTT 59.115 45.455 0.00 0.00 0.00 3.36
130 131 2.504367 AGAAACGTGATTGGGTCCTTG 58.496 47.619 0.00 0.00 0.00 3.61
131 132 2.105821 AGAAACGTGATTGGGTCCTTGA 59.894 45.455 0.00 0.00 0.00 3.02
132 133 1.892209 AACGTGATTGGGTCCTTGAC 58.108 50.000 0.00 0.00 0.00 3.18
133 134 0.762418 ACGTGATTGGGTCCTTGACA 59.238 50.000 0.00 0.00 33.68 3.58
134 135 1.270839 ACGTGATTGGGTCCTTGACAG 60.271 52.381 0.00 0.00 33.68 3.51
135 136 1.168714 GTGATTGGGTCCTTGACAGC 58.831 55.000 0.00 0.00 33.68 4.40
136 137 0.038166 TGATTGGGTCCTTGACAGCC 59.962 55.000 0.00 0.00 33.68 4.85
137 138 1.002134 ATTGGGTCCTTGACAGCCG 60.002 57.895 0.00 0.00 33.68 5.52
138 139 3.842925 TTGGGTCCTTGACAGCCGC 62.843 63.158 0.00 0.00 33.68 6.53
139 140 4.021925 GGGTCCTTGACAGCCGCT 62.022 66.667 0.00 0.00 33.68 5.52
140 141 2.743928 GGTCCTTGACAGCCGCTG 60.744 66.667 19.08 19.08 37.52 5.18
141 142 3.426568 GTCCTTGACAGCCGCTGC 61.427 66.667 20.56 13.23 34.37 5.25
142 143 4.704833 TCCTTGACAGCCGCTGCC 62.705 66.667 20.56 10.29 38.69 4.85
148 149 4.722700 ACAGCCGCTGCCCGATTT 62.723 61.111 20.56 0.00 40.02 2.17
149 150 4.183686 CAGCCGCTGCCCGATTTG 62.184 66.667 7.61 0.00 40.02 2.32
150 151 4.408821 AGCCGCTGCCCGATTTGA 62.409 61.111 0.00 0.00 40.02 2.69
151 152 3.439540 GCCGCTGCCCGATTTGAA 61.440 61.111 0.00 0.00 40.02 2.69
152 153 2.485122 CCGCTGCCCGATTTGAAC 59.515 61.111 0.00 0.00 40.02 3.18
153 154 2.485122 CGCTGCCCGATTTGAACC 59.515 61.111 0.00 0.00 40.02 3.62
154 155 2.040544 CGCTGCCCGATTTGAACCT 61.041 57.895 0.00 0.00 40.02 3.50
155 156 1.803289 GCTGCCCGATTTGAACCTC 59.197 57.895 0.00 0.00 0.00 3.85
156 157 1.982073 GCTGCCCGATTTGAACCTCG 61.982 60.000 0.00 0.00 34.73 4.63
157 158 1.982073 CTGCCCGATTTGAACCTCGC 61.982 60.000 0.00 0.00 33.63 5.03
158 159 2.761195 GCCCGATTTGAACCTCGCC 61.761 63.158 0.00 0.00 33.63 5.54
159 160 2.461110 CCCGATTTGAACCTCGCCG 61.461 63.158 0.00 0.00 33.63 6.46
160 161 1.740296 CCGATTTGAACCTCGCCGT 60.740 57.895 0.00 0.00 33.63 5.68
161 162 1.693083 CCGATTTGAACCTCGCCGTC 61.693 60.000 0.00 0.00 33.63 4.79
162 163 1.708027 GATTTGAACCTCGCCGTCG 59.292 57.895 0.00 0.00 0.00 5.12
163 164 2.292802 GATTTGAACCTCGCCGTCGC 62.293 60.000 0.00 0.00 35.26 5.19
176 177 2.737376 GTCGCCAGGACGAACCAC 60.737 66.667 7.45 0.00 44.93 4.16
177 178 3.998672 TCGCCAGGACGAACCACC 61.999 66.667 3.77 0.00 39.54 4.61
178 179 4.003788 CGCCAGGACGAACCACCT 62.004 66.667 0.00 0.00 42.04 4.00
181 182 2.358737 CAGGACGAACCACCTGGC 60.359 66.667 0.00 0.00 46.76 4.85
182 183 4.003788 AGGACGAACCACCTGGCG 62.004 66.667 0.00 0.00 42.04 5.69
191 192 3.118454 CACCTGGCGCGACGAAAT 61.118 61.111 12.10 0.00 0.00 2.17
192 193 2.813908 ACCTGGCGCGACGAAATC 60.814 61.111 12.10 0.00 0.00 2.17
193 194 2.813474 CCTGGCGCGACGAAATCA 60.813 61.111 12.10 0.00 0.00 2.57
194 195 2.173669 CCTGGCGCGACGAAATCAT 61.174 57.895 12.10 0.00 0.00 2.45
195 196 1.273887 CTGGCGCGACGAAATCATC 59.726 57.895 12.10 0.00 0.00 2.92
196 197 1.420641 CTGGCGCGACGAAATCATCA 61.421 55.000 12.10 0.00 0.00 3.07
197 198 0.809636 TGGCGCGACGAAATCATCAT 60.810 50.000 12.10 0.00 0.00 2.45
198 199 0.383491 GGCGCGACGAAATCATCATG 60.383 55.000 12.10 0.00 0.00 3.07
199 200 0.383491 GCGCGACGAAATCATCATGG 60.383 55.000 12.10 0.00 0.00 3.66
200 201 1.208259 CGCGACGAAATCATCATGGA 58.792 50.000 0.00 0.00 0.00 3.41
201 202 1.592543 CGCGACGAAATCATCATGGAA 59.407 47.619 0.00 0.00 0.00 3.53
202 203 2.347939 CGCGACGAAATCATCATGGAAG 60.348 50.000 0.00 0.00 0.00 3.46
203 204 2.600792 GCGACGAAATCATCATGGAAGC 60.601 50.000 0.00 0.00 0.00 3.86
204 205 2.609002 CGACGAAATCATCATGGAAGCA 59.391 45.455 0.00 0.00 0.00 3.91
205 206 3.249320 CGACGAAATCATCATGGAAGCAT 59.751 43.478 0.00 0.00 0.00 3.79
206 207 4.610007 CGACGAAATCATCATGGAAGCATC 60.610 45.833 0.00 0.00 0.00 3.91
207 208 4.201657 ACGAAATCATCATGGAAGCATCA 58.798 39.130 0.00 0.00 0.00 3.07
208 209 4.036027 ACGAAATCATCATGGAAGCATCAC 59.964 41.667 0.00 0.00 0.00 3.06
209 210 4.275196 CGAAATCATCATGGAAGCATCACT 59.725 41.667 0.00 0.00 0.00 3.41
210 211 5.220989 CGAAATCATCATGGAAGCATCACTT 60.221 40.000 0.00 0.00 42.98 3.16
211 212 5.515797 AATCATCATGGAAGCATCACTTG 57.484 39.130 0.00 0.00 39.29 3.16
222 223 0.376152 CATCACTTGCTCGTCATGGC 59.624 55.000 0.00 0.00 0.00 4.40
223 224 0.745845 ATCACTTGCTCGTCATGGCC 60.746 55.000 0.00 0.00 0.00 5.36
224 225 1.376424 CACTTGCTCGTCATGGCCT 60.376 57.895 3.32 0.00 0.00 5.19
225 226 0.957395 CACTTGCTCGTCATGGCCTT 60.957 55.000 3.32 0.00 0.00 4.35
226 227 0.250901 ACTTGCTCGTCATGGCCTTT 60.251 50.000 3.32 0.00 0.00 3.11
227 228 0.169672 CTTGCTCGTCATGGCCTTTG 59.830 55.000 3.32 1.47 0.00 2.77
228 229 0.250684 TTGCTCGTCATGGCCTTTGA 60.251 50.000 3.32 4.35 0.00 2.69
229 230 0.250684 TGCTCGTCATGGCCTTTGAA 60.251 50.000 3.32 0.00 0.00 2.69
230 231 0.169009 GCTCGTCATGGCCTTTGAAC 59.831 55.000 3.32 2.11 0.00 3.18
231 232 1.813513 CTCGTCATGGCCTTTGAACT 58.186 50.000 3.32 0.00 0.00 3.01
232 233 1.466167 CTCGTCATGGCCTTTGAACTG 59.534 52.381 3.32 1.63 0.00 3.16
233 234 1.202758 TCGTCATGGCCTTTGAACTGT 60.203 47.619 3.32 0.00 0.00 3.55
234 235 1.608590 CGTCATGGCCTTTGAACTGTT 59.391 47.619 3.32 0.00 0.00 3.16
235 236 2.605338 CGTCATGGCCTTTGAACTGTTG 60.605 50.000 3.32 0.00 0.00 3.33
236 237 2.362077 GTCATGGCCTTTGAACTGTTGT 59.638 45.455 3.32 0.00 0.00 3.32
237 238 3.030291 TCATGGCCTTTGAACTGTTGTT 58.970 40.909 3.32 0.00 39.42 2.83
238 239 2.957491 TGGCCTTTGAACTGTTGTTG 57.043 45.000 3.32 0.00 36.39 3.33
239 240 1.480137 TGGCCTTTGAACTGTTGTTGG 59.520 47.619 3.32 0.00 36.39 3.77
240 241 1.754226 GGCCTTTGAACTGTTGTTGGA 59.246 47.619 0.00 0.00 36.39 3.53
241 242 2.167487 GGCCTTTGAACTGTTGTTGGAA 59.833 45.455 0.00 0.00 36.39 3.53
242 243 3.186909 GCCTTTGAACTGTTGTTGGAAC 58.813 45.455 0.00 0.00 36.39 3.62
243 244 3.119137 GCCTTTGAACTGTTGTTGGAACT 60.119 43.478 0.00 0.00 36.39 3.01
244 245 4.423732 CCTTTGAACTGTTGTTGGAACTG 58.576 43.478 0.00 0.00 36.39 3.16
245 246 3.502191 TTGAACTGTTGTTGGAACTGC 57.498 42.857 0.00 0.00 36.39 4.40
246 247 1.748493 TGAACTGTTGTTGGAACTGCC 59.252 47.619 0.00 0.00 36.39 4.85
247 248 2.024414 GAACTGTTGTTGGAACTGCCT 58.976 47.619 0.00 0.00 36.39 4.75
248 249 1.680338 ACTGTTGTTGGAACTGCCTC 58.320 50.000 0.00 0.00 37.63 4.70
249 250 0.954452 CTGTTGTTGGAACTGCCTCC 59.046 55.000 0.00 0.00 37.63 4.30
250 251 0.467290 TGTTGTTGGAACTGCCTCCC 60.467 55.000 0.00 0.00 37.63 4.30
251 252 0.467290 GTTGTTGGAACTGCCTCCCA 60.467 55.000 0.00 0.00 37.63 4.37
252 253 0.482446 TTGTTGGAACTGCCTCCCAT 59.518 50.000 0.00 0.00 37.63 4.00
253 254 0.038166 TGTTGGAACTGCCTCCCATC 59.962 55.000 0.00 0.00 37.63 3.51
254 255 0.038166 GTTGGAACTGCCTCCCATCA 59.962 55.000 0.00 0.00 37.63 3.07
255 256 0.329261 TTGGAACTGCCTCCCATCAG 59.671 55.000 0.00 0.00 37.63 2.90
256 257 1.225704 GGAACTGCCTCCCATCAGG 59.774 63.158 0.00 0.00 34.76 3.86
262 263 4.100084 CCTCCCATCAGGCACGCA 62.100 66.667 0.00 0.00 34.51 5.24
263 264 2.046023 CTCCCATCAGGCACGCAA 60.046 61.111 0.00 0.00 34.51 4.85
264 265 2.046023 TCCCATCAGGCACGCAAG 60.046 61.111 0.00 0.00 38.74 4.01
265 266 3.818787 CCCATCAGGCACGCAAGC 61.819 66.667 0.00 0.00 45.62 4.01
272 273 3.793144 GGCACGCAAGCCGAGAAG 61.793 66.667 0.10 0.00 46.12 2.85
273 274 2.738521 GCACGCAAGCCGAGAAGA 60.739 61.111 0.00 0.00 45.62 2.87
274 275 2.317609 GCACGCAAGCCGAGAAGAA 61.318 57.895 0.00 0.00 45.62 2.52
275 276 1.639298 GCACGCAAGCCGAGAAGAAT 61.639 55.000 0.00 0.00 45.62 2.40
276 277 0.095935 CACGCAAGCCGAGAAGAATG 59.904 55.000 0.00 0.00 45.62 2.67
277 278 1.021390 ACGCAAGCCGAGAAGAATGG 61.021 55.000 0.00 0.00 45.62 3.16
278 279 0.740868 CGCAAGCCGAGAAGAATGGA 60.741 55.000 0.00 0.00 40.02 3.41
279 280 1.012841 GCAAGCCGAGAAGAATGGAG 58.987 55.000 0.00 0.00 0.00 3.86
280 281 1.677217 GCAAGCCGAGAAGAATGGAGT 60.677 52.381 0.00 0.00 0.00 3.85
281 282 2.275318 CAAGCCGAGAAGAATGGAGTC 58.725 52.381 0.00 0.00 0.00 3.36
282 283 1.561643 AGCCGAGAAGAATGGAGTCA 58.438 50.000 0.00 0.00 0.00 3.41
283 284 1.480137 AGCCGAGAAGAATGGAGTCAG 59.520 52.381 0.00 0.00 0.00 3.51
284 285 1.933247 CCGAGAAGAATGGAGTCAGC 58.067 55.000 0.00 0.00 0.00 4.26
285 286 1.472376 CCGAGAAGAATGGAGTCAGCC 60.472 57.143 0.00 0.00 0.00 4.85
286 287 1.205655 CGAGAAGAATGGAGTCAGCCA 59.794 52.381 0.00 0.00 43.23 4.75
287 288 2.626840 GAGAAGAATGGAGTCAGCCAC 58.373 52.381 0.00 0.00 41.56 5.01
288 289 1.280421 AGAAGAATGGAGTCAGCCACC 59.720 52.381 0.00 0.00 41.56 4.61
289 290 1.003580 GAAGAATGGAGTCAGCCACCA 59.996 52.381 0.00 0.00 41.56 4.17
290 291 1.293062 AGAATGGAGTCAGCCACCAT 58.707 50.000 0.00 0.00 44.87 3.55
292 293 3.890527 ATGGAGTCAGCCACCATTC 57.109 52.632 0.00 0.00 40.91 2.67
293 294 0.994247 ATGGAGTCAGCCACCATTCA 59.006 50.000 0.00 0.00 40.91 2.57
294 295 0.325933 TGGAGTCAGCCACCATTCAG 59.674 55.000 0.00 0.00 31.66 3.02
295 296 1.028868 GGAGTCAGCCACCATTCAGC 61.029 60.000 0.00 0.00 0.00 4.26
296 297 1.001641 AGTCAGCCACCATTCAGCC 60.002 57.895 0.00 0.00 0.00 4.85
297 298 1.303561 GTCAGCCACCATTCAGCCA 60.304 57.895 0.00 0.00 0.00 4.75
298 299 1.001764 TCAGCCACCATTCAGCCAG 60.002 57.895 0.00 0.00 0.00 4.85
299 300 1.001764 CAGCCACCATTCAGCCAGA 60.002 57.895 0.00 0.00 0.00 3.86
300 301 0.609957 CAGCCACCATTCAGCCAGAA 60.610 55.000 0.00 0.00 41.28 3.02
301 302 0.323178 AGCCACCATTCAGCCAGAAG 60.323 55.000 0.00 0.00 40.15 2.85
302 303 0.322816 GCCACCATTCAGCCAGAAGA 60.323 55.000 0.00 0.00 40.15 2.87
303 304 1.887956 GCCACCATTCAGCCAGAAGAA 60.888 52.381 0.00 0.00 40.15 2.52
304 305 2.089980 CCACCATTCAGCCAGAAGAAG 58.910 52.381 0.00 0.00 40.15 2.85
305 306 1.471684 CACCATTCAGCCAGAAGAAGC 59.528 52.381 0.00 0.00 40.15 3.86
306 307 1.074405 ACCATTCAGCCAGAAGAAGCA 59.926 47.619 0.00 0.00 40.15 3.91
307 308 2.165167 CCATTCAGCCAGAAGAAGCAA 58.835 47.619 0.00 0.00 40.15 3.91
308 309 2.559668 CCATTCAGCCAGAAGAAGCAAA 59.440 45.455 0.00 0.00 40.15 3.68
309 310 3.006110 CCATTCAGCCAGAAGAAGCAAAA 59.994 43.478 0.00 0.00 40.15 2.44
310 311 3.996150 TTCAGCCAGAAGAAGCAAAAG 57.004 42.857 0.00 0.00 0.00 2.27
311 312 1.610522 TCAGCCAGAAGAAGCAAAAGC 59.389 47.619 0.00 0.00 0.00 3.51
312 313 1.338973 CAGCCAGAAGAAGCAAAAGCA 59.661 47.619 0.00 0.00 0.00 3.91
313 314 1.339291 AGCCAGAAGAAGCAAAAGCAC 59.661 47.619 0.00 0.00 0.00 4.40
314 315 1.339291 GCCAGAAGAAGCAAAAGCACT 59.661 47.619 0.00 0.00 0.00 4.40
315 316 2.223900 GCCAGAAGAAGCAAAAGCACTT 60.224 45.455 0.00 0.00 0.00 3.16
316 317 3.378339 CCAGAAGAAGCAAAAGCACTTG 58.622 45.455 0.00 0.00 0.00 3.16
327 328 4.090057 GCACTTGCGAAGACCGGC 62.090 66.667 0.00 0.00 39.04 6.13
328 329 2.664851 CACTTGCGAAGACCGGCA 60.665 61.111 0.00 0.00 39.04 5.69
329 330 2.034879 CACTTGCGAAGACCGGCAT 61.035 57.895 0.00 0.00 39.04 4.40
330 331 1.741770 ACTTGCGAAGACCGGCATC 60.742 57.895 0.00 0.00 39.04 3.91
331 332 2.435938 TTGCGAAGACCGGCATCC 60.436 61.111 0.00 0.00 39.04 3.51
332 333 3.247056 TTGCGAAGACCGGCATCCA 62.247 57.895 0.00 0.00 39.04 3.41
333 334 2.203070 GCGAAGACCGGCATCCAT 60.203 61.111 0.00 0.00 39.04 3.41
334 335 1.069090 GCGAAGACCGGCATCCATA 59.931 57.895 0.00 0.00 39.04 2.74
335 336 0.320771 GCGAAGACCGGCATCCATAT 60.321 55.000 0.00 0.00 39.04 1.78
336 337 1.432514 CGAAGACCGGCATCCATATG 58.567 55.000 0.00 0.00 36.09 1.78
337 338 1.270305 CGAAGACCGGCATCCATATGT 60.270 52.381 0.00 0.00 35.38 2.29
338 339 2.146342 GAAGACCGGCATCCATATGTG 58.854 52.381 0.00 0.00 35.38 3.21
340 341 0.606401 GACCGGCATCCATATGTGGG 60.606 60.000 8.84 0.00 46.06 4.61
341 342 1.973281 CCGGCATCCATATGTGGGC 60.973 63.158 8.84 4.95 46.06 5.36
342 343 2.327343 CGGCATCCATATGTGGGCG 61.327 63.158 8.84 16.04 46.06 6.13
343 344 1.228245 GGCATCCATATGTGGGCGT 60.228 57.895 8.84 0.00 46.06 5.68
344 345 1.237285 GGCATCCATATGTGGGCGTC 61.237 60.000 8.84 0.00 46.06 5.19
345 346 1.568612 GCATCCATATGTGGGCGTCG 61.569 60.000 8.84 0.00 46.06 5.12
346 347 0.249868 CATCCATATGTGGGCGTCGT 60.250 55.000 8.84 0.00 46.06 4.34
347 348 0.468226 ATCCATATGTGGGCGTCGTT 59.532 50.000 8.84 0.00 46.06 3.85
348 349 0.461163 TCCATATGTGGGCGTCGTTG 60.461 55.000 8.84 0.00 46.06 4.10
349 350 1.351707 CATATGTGGGCGTCGTTGC 59.648 57.895 0.00 0.00 0.00 4.17
350 351 1.089481 CATATGTGGGCGTCGTTGCT 61.089 55.000 0.00 0.00 34.52 3.91
351 352 0.810031 ATATGTGGGCGTCGTTGCTC 60.810 55.000 0.00 0.00 35.30 4.26
352 353 2.845752 TATGTGGGCGTCGTTGCTCC 62.846 60.000 0.00 1.78 33.12 4.70
353 354 4.980805 GTGGGCGTCGTTGCTCCA 62.981 66.667 0.00 4.04 33.12 3.86
354 355 4.980805 TGGGCGTCGTTGCTCCAC 62.981 66.667 0.00 0.00 33.12 4.02
356 357 4.980805 GGCGTCGTTGCTCCACCA 62.981 66.667 0.00 0.00 34.52 4.17
357 358 2.970324 GCGTCGTTGCTCCACCAA 60.970 61.111 0.00 0.00 0.00 3.67
358 359 2.539338 GCGTCGTTGCTCCACCAAA 61.539 57.895 0.00 0.00 0.00 3.28
359 360 1.569493 CGTCGTTGCTCCACCAAAG 59.431 57.895 0.00 0.00 0.00 2.77
360 361 0.878523 CGTCGTTGCTCCACCAAAGA 60.879 55.000 0.00 0.00 32.23 2.52
361 362 0.868406 GTCGTTGCTCCACCAAAGAG 59.132 55.000 0.00 0.00 34.68 2.85
362 363 0.756294 TCGTTGCTCCACCAAAGAGA 59.244 50.000 0.00 0.00 32.86 3.10
363 364 0.868406 CGTTGCTCCACCAAAGAGAC 59.132 55.000 0.00 0.00 32.86 3.36
364 365 1.239347 GTTGCTCCACCAAAGAGACC 58.761 55.000 0.00 0.00 32.86 3.85
365 366 1.140312 TTGCTCCACCAAAGAGACCT 58.860 50.000 0.00 0.00 32.86 3.85
366 367 0.687354 TGCTCCACCAAAGAGACCTC 59.313 55.000 0.00 0.00 32.86 3.85
367 368 0.980423 GCTCCACCAAAGAGACCTCT 59.020 55.000 0.00 0.00 42.75 3.69
379 380 5.852282 AAGAGACCTCTTCTGATAAGCTC 57.148 43.478 6.46 0.00 46.13 4.09
380 381 4.865905 AGAGACCTCTTCTGATAAGCTCA 58.134 43.478 0.00 0.00 36.31 4.26
381 382 5.268387 AGAGACCTCTTCTGATAAGCTCAA 58.732 41.667 0.00 0.00 36.31 3.02
382 383 5.719085 AGAGACCTCTTCTGATAAGCTCAAA 59.281 40.000 0.00 0.00 36.31 2.69
383 384 5.729510 AGACCTCTTCTGATAAGCTCAAAC 58.270 41.667 0.00 0.00 32.14 2.93
384 385 4.837972 ACCTCTTCTGATAAGCTCAAACC 58.162 43.478 0.00 0.00 32.14 3.27
385 386 4.534103 ACCTCTTCTGATAAGCTCAAACCT 59.466 41.667 0.00 0.00 32.14 3.50
386 387 4.874966 CCTCTTCTGATAAGCTCAAACCTG 59.125 45.833 0.00 0.00 32.14 4.00
387 388 5.337894 CCTCTTCTGATAAGCTCAAACCTGA 60.338 44.000 0.00 0.00 32.14 3.86
388 389 5.482908 TCTTCTGATAAGCTCAAACCTGAC 58.517 41.667 0.00 0.00 32.14 3.51
389 390 4.207891 TCTGATAAGCTCAAACCTGACC 57.792 45.455 0.00 0.00 32.14 4.02
390 391 3.840666 TCTGATAAGCTCAAACCTGACCT 59.159 43.478 0.00 0.00 32.14 3.85
391 392 3.937706 CTGATAAGCTCAAACCTGACCTG 59.062 47.826 0.00 0.00 32.14 4.00
392 393 2.185004 TAAGCTCAAACCTGACCTGC 57.815 50.000 0.00 0.00 0.00 4.85
393 394 0.183492 AAGCTCAAACCTGACCTGCA 59.817 50.000 0.00 0.00 0.00 4.41
394 395 0.250640 AGCTCAAACCTGACCTGCAG 60.251 55.000 6.78 6.78 44.49 4.41
401 402 4.298009 CTGACCTGCAGGCTTCAG 57.702 61.111 33.06 30.69 41.07 3.02
402 403 1.374190 CTGACCTGCAGGCTTCAGT 59.626 57.895 31.48 16.23 41.07 3.41
403 404 0.250640 CTGACCTGCAGGCTTCAGTT 60.251 55.000 31.48 15.58 41.07 3.16
404 405 0.183492 TGACCTGCAGGCTTCAGTTT 59.817 50.000 33.06 10.64 39.32 2.66
405 406 1.322442 GACCTGCAGGCTTCAGTTTT 58.678 50.000 33.06 9.80 39.32 2.43
406 407 1.268079 GACCTGCAGGCTTCAGTTTTC 59.732 52.381 33.06 15.23 39.32 2.29
407 408 1.133668 ACCTGCAGGCTTCAGTTTTCT 60.134 47.619 33.06 5.36 39.32 2.52
408 409 3.332623 ACCTGCAGGCTTCAGTTTTCTG 61.333 50.000 33.06 3.88 43.32 3.02
409 410 3.486285 GCAGGCTTCAGTTTTCTGC 57.514 52.632 0.00 0.00 46.59 4.26
410 411 0.386478 GCAGGCTTCAGTTTTCTGCG 60.386 55.000 0.00 0.00 46.59 5.18
411 412 0.386478 CAGGCTTCAGTTTTCTGCGC 60.386 55.000 0.00 0.00 46.59 6.09
412 413 4.541020 GCTTCAGTTTTCTGCGCC 57.459 55.556 4.18 0.00 46.59 6.53
413 414 1.952263 GCTTCAGTTTTCTGCGCCT 59.048 52.632 4.18 0.00 46.59 5.52
414 415 1.156736 GCTTCAGTTTTCTGCGCCTA 58.843 50.000 4.18 0.00 46.59 3.93
415 416 1.135944 GCTTCAGTTTTCTGCGCCTAC 60.136 52.381 4.18 0.00 46.59 3.18
416 417 1.464997 CTTCAGTTTTCTGCGCCTACC 59.535 52.381 4.18 0.00 46.59 3.18
417 418 0.321298 TCAGTTTTCTGCGCCTACCC 60.321 55.000 4.18 0.00 46.59 3.69
418 419 0.321653 CAGTTTTCTGCGCCTACCCT 60.322 55.000 4.18 0.00 41.24 4.34
419 420 0.321653 AGTTTTCTGCGCCTACCCTG 60.322 55.000 4.18 0.00 0.00 4.45
420 421 1.674322 TTTTCTGCGCCTACCCTGC 60.674 57.895 4.18 0.00 0.00 4.85
421 422 2.124507 TTTTCTGCGCCTACCCTGCT 62.125 55.000 4.18 0.00 0.00 4.24
422 423 2.521958 TTTCTGCGCCTACCCTGCTC 62.522 60.000 4.18 0.00 0.00 4.26
423 424 4.537433 CTGCGCCTACCCTGCTCC 62.537 72.222 4.18 0.00 0.00 4.70
425 426 4.228567 GCGCCTACCCTGCTCCTC 62.229 72.222 0.00 0.00 0.00 3.71
426 427 3.905678 CGCCTACCCTGCTCCTCG 61.906 72.222 0.00 0.00 0.00 4.63
427 428 2.760385 GCCTACCCTGCTCCTCGT 60.760 66.667 0.00 0.00 0.00 4.18
428 429 2.787567 GCCTACCCTGCTCCTCGTC 61.788 68.421 0.00 0.00 0.00 4.20
429 430 2.128507 CCTACCCTGCTCCTCGTCC 61.129 68.421 0.00 0.00 0.00 4.79
430 431 1.379977 CTACCCTGCTCCTCGTCCA 60.380 63.158 0.00 0.00 0.00 4.02
431 432 1.668101 CTACCCTGCTCCTCGTCCAC 61.668 65.000 0.00 0.00 0.00 4.02
432 433 3.775654 CCCTGCTCCTCGTCCACC 61.776 72.222 0.00 0.00 0.00 4.61
433 434 2.997315 CCTGCTCCTCGTCCACCA 60.997 66.667 0.00 0.00 0.00 4.17
434 435 2.362369 CCTGCTCCTCGTCCACCAT 61.362 63.158 0.00 0.00 0.00 3.55
435 436 1.142748 CTGCTCCTCGTCCACCATC 59.857 63.158 0.00 0.00 0.00 3.51
436 437 1.607801 CTGCTCCTCGTCCACCATCA 61.608 60.000 0.00 0.00 0.00 3.07
437 438 0.977627 TGCTCCTCGTCCACCATCAT 60.978 55.000 0.00 0.00 0.00 2.45
438 439 0.531532 GCTCCTCGTCCACCATCATG 60.532 60.000 0.00 0.00 0.00 3.07
439 440 0.105593 CTCCTCGTCCACCATCATGG 59.894 60.000 0.54 0.54 45.02 3.66
453 454 5.695851 CCATCATGGTAGCCTGATAAAAC 57.304 43.478 11.63 0.00 31.05 2.43
454 455 5.132502 CCATCATGGTAGCCTGATAAAACA 58.867 41.667 11.63 0.00 31.05 2.83
455 456 5.593909 CCATCATGGTAGCCTGATAAAACAA 59.406 40.000 11.63 0.00 31.05 2.83
456 457 6.238842 CCATCATGGTAGCCTGATAAAACAAG 60.239 42.308 11.63 0.00 31.05 3.16
457 458 4.640201 TCATGGTAGCCTGATAAAACAAGC 59.360 41.667 0.00 0.00 0.00 4.01
458 459 4.027674 TGGTAGCCTGATAAAACAAGCA 57.972 40.909 0.00 0.00 30.62 3.91
459 460 4.009675 TGGTAGCCTGATAAAACAAGCAG 58.990 43.478 0.00 0.00 30.62 4.24
460 461 3.181496 GGTAGCCTGATAAAACAAGCAGC 60.181 47.826 0.00 0.00 30.62 5.25
461 462 2.517959 AGCCTGATAAAACAAGCAGCA 58.482 42.857 0.00 0.00 30.62 4.41
462 463 2.490903 AGCCTGATAAAACAAGCAGCAG 59.509 45.455 0.00 0.00 30.62 4.24
463 464 2.872370 CCTGATAAAACAAGCAGCAGC 58.128 47.619 0.00 0.00 42.56 5.25
464 465 2.229543 CCTGATAAAACAAGCAGCAGCA 59.770 45.455 3.17 0.00 45.49 4.41
465 466 3.499048 CTGATAAAACAAGCAGCAGCAG 58.501 45.455 3.17 0.00 45.49 4.24
466 467 3.148412 TGATAAAACAAGCAGCAGCAGA 58.852 40.909 3.17 0.00 45.49 4.26
467 468 3.760151 TGATAAAACAAGCAGCAGCAGAT 59.240 39.130 3.17 0.00 45.49 2.90
468 469 2.433868 AAAACAAGCAGCAGCAGATG 57.566 45.000 3.17 1.91 45.49 2.90
469 470 0.601558 AAACAAGCAGCAGCAGATGG 59.398 50.000 3.17 0.00 45.49 3.51
470 471 0.251033 AACAAGCAGCAGCAGATGGA 60.251 50.000 3.17 0.00 45.49 3.41
471 472 0.034380 ACAAGCAGCAGCAGATGGAT 60.034 50.000 3.17 0.00 45.49 3.41
472 473 0.382158 CAAGCAGCAGCAGATGGATG 59.618 55.000 3.17 0.00 45.49 3.51
473 474 0.034380 AAGCAGCAGCAGATGGATGT 60.034 50.000 3.17 0.00 45.49 3.06
474 475 0.464013 AGCAGCAGCAGATGGATGTC 60.464 55.000 3.17 0.00 45.49 3.06
475 476 1.445716 GCAGCAGCAGATGGATGTCC 61.446 60.000 0.00 0.00 41.58 4.02
476 477 0.180642 CAGCAGCAGATGGATGTCCT 59.819 55.000 0.00 0.00 34.68 3.85
477 478 0.469070 AGCAGCAGATGGATGTCCTC 59.531 55.000 0.00 0.00 34.68 3.71
478 479 0.534652 GCAGCAGATGGATGTCCTCC 60.535 60.000 0.09 0.00 45.19 4.30
487 488 1.055040 GGATGTCCTCCAGATCAGGG 58.945 60.000 4.05 0.39 44.26 4.45
488 489 1.413662 GGATGTCCTCCAGATCAGGGA 60.414 57.143 4.05 5.17 44.26 4.20
489 490 2.402564 GATGTCCTCCAGATCAGGGAA 58.597 52.381 4.05 0.00 33.11 3.97
490 491 1.573108 TGTCCTCCAGATCAGGGAAC 58.427 55.000 4.05 3.28 33.11 3.62
491 492 1.203300 TGTCCTCCAGATCAGGGAACA 60.203 52.381 4.05 5.72 33.11 3.18
492 493 1.208293 GTCCTCCAGATCAGGGAACAC 59.792 57.143 4.05 2.24 33.11 3.32
493 494 0.543749 CCTCCAGATCAGGGAACACC 59.456 60.000 4.05 0.00 40.67 4.16
494 495 1.279496 CTCCAGATCAGGGAACACCA 58.721 55.000 4.05 0.00 43.89 4.17
495 496 1.842562 CTCCAGATCAGGGAACACCAT 59.157 52.381 4.05 0.00 43.89 3.55
496 497 1.839994 TCCAGATCAGGGAACACCATC 59.160 52.381 4.05 0.00 43.89 3.51
497 498 1.473965 CCAGATCAGGGAACACCATCG 60.474 57.143 0.00 0.00 43.89 3.84
498 499 0.179000 AGATCAGGGAACACCATCGC 59.821 55.000 0.00 0.00 43.89 4.58
499 500 0.107703 GATCAGGGAACACCATCGCA 60.108 55.000 0.00 0.00 43.89 5.10
500 501 0.392998 ATCAGGGAACACCATCGCAC 60.393 55.000 0.00 0.00 43.89 5.34
501 502 1.003355 CAGGGAACACCATCGCACT 60.003 57.895 0.00 0.00 43.89 4.40
502 503 1.003355 AGGGAACACCATCGCACTG 60.003 57.895 0.00 0.00 43.89 3.66
503 504 1.003839 GGGAACACCATCGCACTGA 60.004 57.895 0.00 0.00 39.85 3.41
504 505 0.605319 GGGAACACCATCGCACTGAA 60.605 55.000 0.00 0.00 39.85 3.02
505 506 1.234821 GGAACACCATCGCACTGAAA 58.765 50.000 0.00 0.00 0.00 2.69
506 507 1.069227 GGAACACCATCGCACTGAAAC 60.069 52.381 0.00 0.00 0.00 2.78
507 508 0.586319 AACACCATCGCACTGAAACG 59.414 50.000 0.00 0.00 0.00 3.60
508 509 0.249699 ACACCATCGCACTGAAACGA 60.250 50.000 0.00 0.00 43.33 3.85
509 510 0.439985 CACCATCGCACTGAAACGAG 59.560 55.000 0.00 0.00 42.31 4.18
510 511 1.291877 ACCATCGCACTGAAACGAGC 61.292 55.000 0.00 0.00 42.31 5.03
511 512 1.016130 CCATCGCACTGAAACGAGCT 61.016 55.000 0.00 0.00 42.31 4.09
512 513 0.792640 CATCGCACTGAAACGAGCTT 59.207 50.000 0.00 0.00 42.31 3.74
513 514 1.992667 CATCGCACTGAAACGAGCTTA 59.007 47.619 0.00 0.00 42.31 3.09
514 515 2.363788 TCGCACTGAAACGAGCTTAT 57.636 45.000 0.00 0.00 33.69 1.73
515 516 2.259618 TCGCACTGAAACGAGCTTATC 58.740 47.619 0.00 0.00 33.69 1.75
516 517 1.324736 CGCACTGAAACGAGCTTATCC 59.675 52.381 0.00 0.00 0.00 2.59
517 518 2.346803 GCACTGAAACGAGCTTATCCA 58.653 47.619 0.00 0.00 0.00 3.41
518 519 2.742053 GCACTGAAACGAGCTTATCCAA 59.258 45.455 0.00 0.00 0.00 3.53
519 520 3.181516 GCACTGAAACGAGCTTATCCAAG 60.182 47.826 0.00 0.00 34.66 3.61
520 521 3.372206 CACTGAAACGAGCTTATCCAAGG 59.628 47.826 0.00 0.00 31.96 3.61
521 522 2.352960 CTGAAACGAGCTTATCCAAGGC 59.647 50.000 0.00 0.00 31.96 4.35
522 523 1.327764 GAAACGAGCTTATCCAAGGCG 59.672 52.381 0.00 0.00 31.96 5.52
523 524 0.535335 AACGAGCTTATCCAAGGCGA 59.465 50.000 0.00 0.00 31.96 5.54
524 525 0.753262 ACGAGCTTATCCAAGGCGAT 59.247 50.000 0.00 0.00 31.96 4.58
525 526 1.269831 ACGAGCTTATCCAAGGCGATC 60.270 52.381 0.00 0.00 31.96 3.69
526 527 1.000283 CGAGCTTATCCAAGGCGATCT 60.000 52.381 0.00 0.00 31.96 2.75
527 528 2.546795 CGAGCTTATCCAAGGCGATCTT 60.547 50.000 0.00 0.00 35.79 2.40
541 542 3.768633 ATCTTGCCAGATCCGACAC 57.231 52.632 0.00 0.00 34.26 3.67
542 543 0.179000 ATCTTGCCAGATCCGACACC 59.821 55.000 0.00 0.00 34.26 4.16
543 544 0.904865 TCTTGCCAGATCCGACACCT 60.905 55.000 0.00 0.00 0.00 4.00
544 545 0.036010 CTTGCCAGATCCGACACCTT 60.036 55.000 0.00 0.00 0.00 3.50
545 546 0.036388 TTGCCAGATCCGACACCTTC 60.036 55.000 0.00 0.00 0.00 3.46
546 547 1.153349 GCCAGATCCGACACCTTCC 60.153 63.158 0.00 0.00 0.00 3.46
547 548 1.899437 GCCAGATCCGACACCTTCCA 61.899 60.000 0.00 0.00 0.00 3.53
548 549 0.108138 CCAGATCCGACACCTTCCAC 60.108 60.000 0.00 0.00 0.00 4.02
549 550 0.898320 CAGATCCGACACCTTCCACT 59.102 55.000 0.00 0.00 0.00 4.00
550 551 1.134965 CAGATCCGACACCTTCCACTC 60.135 57.143 0.00 0.00 0.00 3.51
551 552 1.187087 GATCCGACACCTTCCACTCT 58.813 55.000 0.00 0.00 0.00 3.24
552 553 1.135333 GATCCGACACCTTCCACTCTC 59.865 57.143 0.00 0.00 0.00 3.20
553 554 0.898789 TCCGACACCTTCCACTCTCC 60.899 60.000 0.00 0.00 0.00 3.71
554 555 1.592223 CGACACCTTCCACTCTCCC 59.408 63.158 0.00 0.00 0.00 4.30
555 556 1.889530 CGACACCTTCCACTCTCCCC 61.890 65.000 0.00 0.00 0.00 4.81
556 557 1.539124 ACACCTTCCACTCTCCCCC 60.539 63.158 0.00 0.00 0.00 5.40
557 558 1.538876 CACCTTCCACTCTCCCCCA 60.539 63.158 0.00 0.00 0.00 4.96
558 559 1.539124 ACCTTCCACTCTCCCCCAC 60.539 63.158 0.00 0.00 0.00 4.61
559 560 2.301738 CCTTCCACTCTCCCCCACC 61.302 68.421 0.00 0.00 0.00 4.61
560 561 1.538876 CTTCCACTCTCCCCCACCA 60.539 63.158 0.00 0.00 0.00 4.17
561 562 0.916358 CTTCCACTCTCCCCCACCAT 60.916 60.000 0.00 0.00 0.00 3.55
562 563 1.207488 TTCCACTCTCCCCCACCATG 61.207 60.000 0.00 0.00 0.00 3.66
563 564 2.683465 CCACTCTCCCCCACCATGG 61.683 68.421 11.19 11.19 37.25 3.66
572 573 3.519291 CCACCATGGGGGAAGGAA 58.481 61.111 30.99 0.00 41.15 3.36
573 574 1.307647 CCACCATGGGGGAAGGAAG 59.692 63.158 30.99 0.00 41.15 3.46
574 575 1.214305 CCACCATGGGGGAAGGAAGA 61.214 60.000 30.99 0.00 41.15 2.87
575 576 0.704076 CACCATGGGGGAAGGAAGAA 59.296 55.000 18.09 0.00 41.15 2.52
576 577 1.002857 ACCATGGGGGAAGGAAGAAG 58.997 55.000 18.09 0.00 41.15 2.85
577 578 1.298953 CCATGGGGGAAGGAAGAAGA 58.701 55.000 2.85 0.00 40.01 2.87
578 579 1.064389 CCATGGGGGAAGGAAGAAGAC 60.064 57.143 2.85 0.00 40.01 3.01
579 580 0.912486 ATGGGGGAAGGAAGAAGACG 59.088 55.000 0.00 0.00 0.00 4.18
580 581 0.178915 TGGGGGAAGGAAGAAGACGA 60.179 55.000 0.00 0.00 0.00 4.20
581 582 0.249676 GGGGGAAGGAAGAAGACGAC 59.750 60.000 0.00 0.00 0.00 4.34
582 583 0.249676 GGGGAAGGAAGAAGACGACC 59.750 60.000 0.00 0.00 0.00 4.79
583 584 0.974383 GGGAAGGAAGAAGACGACCA 59.026 55.000 0.00 0.00 0.00 4.02
584 585 1.066787 GGGAAGGAAGAAGACGACCAG 60.067 57.143 0.00 0.00 0.00 4.00
585 586 1.673329 GGAAGGAAGAAGACGACCAGC 60.673 57.143 0.00 0.00 0.00 4.85
586 587 1.000955 GAAGGAAGAAGACGACCAGCA 59.999 52.381 0.00 0.00 0.00 4.41
587 588 0.318762 AGGAAGAAGACGACCAGCAC 59.681 55.000 0.00 0.00 0.00 4.40
588 589 0.670854 GGAAGAAGACGACCAGCACC 60.671 60.000 0.00 0.00 0.00 5.01
589 590 1.006102 AAGAAGACGACCAGCACCG 60.006 57.895 0.00 0.00 0.00 4.94
590 591 2.432628 GAAGACGACCAGCACCGG 60.433 66.667 0.00 0.00 0.00 5.28
591 592 4.681978 AAGACGACCAGCACCGGC 62.682 66.667 0.00 0.00 41.61 6.13
598 599 4.015406 CCAGCACCGGCACCACTA 62.015 66.667 0.00 0.00 44.61 2.74
599 600 2.434884 CAGCACCGGCACCACTAG 60.435 66.667 0.00 0.00 44.61 2.57
600 601 2.603473 AGCACCGGCACCACTAGA 60.603 61.111 0.00 0.00 44.61 2.43
601 602 2.434359 GCACCGGCACCACTAGAC 60.434 66.667 0.00 0.00 40.72 2.59
602 603 3.056458 CACCGGCACCACTAGACA 58.944 61.111 0.00 0.00 0.00 3.41
603 604 1.374252 CACCGGCACCACTAGACAC 60.374 63.158 0.00 0.00 0.00 3.67
604 605 1.533273 ACCGGCACCACTAGACACT 60.533 57.895 0.00 0.00 0.00 3.55
605 606 0.251474 ACCGGCACCACTAGACACTA 60.251 55.000 0.00 0.00 0.00 2.74
606 607 0.172803 CCGGCACCACTAGACACTAC 59.827 60.000 0.00 0.00 0.00 2.73
607 608 1.174783 CGGCACCACTAGACACTACT 58.825 55.000 0.00 0.00 0.00 2.57
608 609 1.132643 CGGCACCACTAGACACTACTC 59.867 57.143 0.00 0.00 0.00 2.59
609 610 1.132643 GGCACCACTAGACACTACTCG 59.867 57.143 0.00 0.00 0.00 4.18
610 611 2.082231 GCACCACTAGACACTACTCGA 58.918 52.381 0.00 0.00 0.00 4.04
611 612 2.096174 GCACCACTAGACACTACTCGAG 59.904 54.545 11.84 11.84 0.00 4.04
780 783 1.076485 GCTTGGGCCCATCTGTCAT 60.076 57.895 29.23 0.00 0.00 3.06
881 890 3.834799 GCTCGGTCGGTCGGGAAT 61.835 66.667 2.55 0.00 31.16 3.01
928 955 2.284921 CACTCCCCTGCTCCCAGA 60.285 66.667 0.00 0.00 41.77 3.86
954 981 1.303074 TCCAGTACGAGCTCACCGT 60.303 57.895 15.40 9.43 43.26 4.83
1033 1061 1.585006 GACGAGGAAACCAGCTCGA 59.415 57.895 0.00 0.00 41.24 4.04
1046 1074 2.492090 CTCGAAGGAGGAGTGCGG 59.508 66.667 0.00 0.00 36.61 5.69
1054 1082 3.934391 GAGGAGTGCGGGGTTGTCG 62.934 68.421 0.00 0.00 0.00 4.35
1264 1301 5.950544 ATACAGTGTTAGGGTTCATGCTA 57.049 39.130 0.00 0.00 0.00 3.49
1298 1353 8.891671 ATTTAATGAACAGTGCAAGTTGATTT 57.108 26.923 18.20 8.99 35.13 2.17
1368 1423 1.149288 AGGAGGAACCAGACACCACTA 59.851 52.381 0.00 0.00 42.04 2.74
1392 1447 1.194121 GCCCCTTTTCTGTGGCCAAT 61.194 55.000 7.24 0.00 37.94 3.16
1401 1456 3.153369 TCTGTGGCCAATTTGAGCTTA 57.847 42.857 7.24 0.00 0.00 3.09
1418 1473 2.615912 GCTTACTCATCCCAAGTGCATC 59.384 50.000 0.00 0.00 0.00 3.91
1869 1936 4.280929 GCAGAACTTTGGAAGGGTAAATGT 59.719 41.667 0.00 0.00 0.00 2.71
2145 2259 4.032703 TCAAACTTGCAAAAGAGCAGAC 57.967 40.909 0.00 0.00 46.54 3.51
3190 3414 7.335627 TGAGAGAGAGTTTTGGTAGTTTTTGA 58.664 34.615 0.00 0.00 0.00 2.69
3194 3418 7.339482 AGAGAGTTTTGGTAGTTTTTGAGAGT 58.661 34.615 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.282555 CGAAGCCATTCACATACACGAG 59.717 50.000 0.00 0.00 34.94 4.18
1 2 2.094442 TCGAAGCCATTCACATACACGA 60.094 45.455 0.00 0.00 34.94 4.35
3 4 4.094887 ACAATCGAAGCCATTCACATACAC 59.905 41.667 0.00 0.00 34.94 2.90
4 5 4.260985 ACAATCGAAGCCATTCACATACA 58.739 39.130 0.00 0.00 34.94 2.29
5 6 4.882671 ACAATCGAAGCCATTCACATAC 57.117 40.909 0.00 0.00 34.94 2.39
6 7 5.670485 AGTACAATCGAAGCCATTCACATA 58.330 37.500 0.00 0.00 34.94 2.29
7 8 4.517285 AGTACAATCGAAGCCATTCACAT 58.483 39.130 0.00 0.00 34.94 3.21
8 9 3.932710 GAGTACAATCGAAGCCATTCACA 59.067 43.478 0.00 0.00 34.94 3.58
9 10 3.932710 TGAGTACAATCGAAGCCATTCAC 59.067 43.478 0.00 0.00 34.94 3.18
10 11 4.183865 CTGAGTACAATCGAAGCCATTCA 58.816 43.478 0.00 0.00 34.94 2.57
11 12 4.184629 ACTGAGTACAATCGAAGCCATTC 58.815 43.478 0.00 0.00 0.00 2.67
12 13 4.207891 ACTGAGTACAATCGAAGCCATT 57.792 40.909 0.00 0.00 0.00 3.16
13 14 3.895232 ACTGAGTACAATCGAAGCCAT 57.105 42.857 0.00 0.00 0.00 4.40
14 15 3.678056 AACTGAGTACAATCGAAGCCA 57.322 42.857 0.00 0.00 0.00 4.75
15 16 6.476243 TTTTAACTGAGTACAATCGAAGCC 57.524 37.500 0.00 0.00 0.00 4.35
37 38 8.815565 AATGTTTTTATTTGGGTCCTGTTTTT 57.184 26.923 0.00 0.00 0.00 1.94
38 39 9.332502 GTAATGTTTTTATTTGGGTCCTGTTTT 57.667 29.630 0.00 0.00 0.00 2.43
39 40 8.487028 TGTAATGTTTTTATTTGGGTCCTGTTT 58.513 29.630 0.00 0.00 0.00 2.83
63 64 8.148999 CCTTGTAGAAGTTAAGGAGTTAGTTGT 58.851 37.037 0.00 0.00 42.82 3.32
64 65 8.365647 TCCTTGTAGAAGTTAAGGAGTTAGTTG 58.634 37.037 0.00 0.00 43.64 3.16
65 66 8.488308 TCCTTGTAGAAGTTAAGGAGTTAGTT 57.512 34.615 0.00 0.00 43.64 2.24
72 73 6.082707 AGGTCTTCCTTGTAGAAGTTAAGGA 58.917 40.000 0.00 0.00 46.03 3.36
73 74 6.361768 AGGTCTTCCTTGTAGAAGTTAAGG 57.638 41.667 10.31 0.00 42.12 2.69
74 75 6.072064 TCGAGGTCTTCCTTGTAGAAGTTAAG 60.072 42.308 0.00 2.84 45.24 1.85
75 76 5.771666 TCGAGGTCTTCCTTGTAGAAGTTAA 59.228 40.000 0.00 0.00 45.24 2.01
76 77 5.319453 TCGAGGTCTTCCTTGTAGAAGTTA 58.681 41.667 0.00 0.00 45.24 2.24
77 78 4.150359 TCGAGGTCTTCCTTGTAGAAGTT 58.850 43.478 0.00 0.00 45.24 2.66
78 79 3.759618 CTCGAGGTCTTCCTTGTAGAAGT 59.240 47.826 3.91 0.00 45.24 3.01
79 80 3.428316 GCTCGAGGTCTTCCTTGTAGAAG 60.428 52.174 15.58 0.00 45.24 2.85
80 81 2.492484 GCTCGAGGTCTTCCTTGTAGAA 59.508 50.000 15.58 0.00 45.24 2.10
81 82 2.093106 GCTCGAGGTCTTCCTTGTAGA 58.907 52.381 15.58 0.00 45.24 2.59
82 83 2.096248 AGCTCGAGGTCTTCCTTGTAG 58.904 52.381 12.24 0.92 45.24 2.74
83 84 1.819288 CAGCTCGAGGTCTTCCTTGTA 59.181 52.381 15.54 0.00 45.24 2.41
84 85 0.605589 CAGCTCGAGGTCTTCCTTGT 59.394 55.000 15.54 0.00 45.24 3.16
85 86 0.891373 TCAGCTCGAGGTCTTCCTTG 59.109 55.000 15.54 1.54 45.24 3.61
86 87 1.633774 TTCAGCTCGAGGTCTTCCTT 58.366 50.000 15.54 0.00 45.24 3.36
87 88 4.301940 GCTTTCAGCTCGAGGTCTTCCT 62.302 54.545 15.54 0.00 41.93 3.36
88 89 2.003196 CTTTCAGCTCGAGGTCTTCC 57.997 55.000 15.54 0.00 0.00 3.46
89 90 1.337260 TGCTTTCAGCTCGAGGTCTTC 60.337 52.381 15.54 3.27 42.97 2.87
90 91 0.681733 TGCTTTCAGCTCGAGGTCTT 59.318 50.000 15.54 0.00 42.97 3.01
91 92 0.681733 TTGCTTTCAGCTCGAGGTCT 59.318 50.000 15.54 0.00 42.97 3.85
92 93 1.074752 CTTGCTTTCAGCTCGAGGTC 58.925 55.000 15.54 3.57 42.97 3.85
93 94 0.681733 TCTTGCTTTCAGCTCGAGGT 59.318 50.000 12.24 12.24 42.97 3.85
94 95 1.800805 TTCTTGCTTTCAGCTCGAGG 58.199 50.000 15.58 0.00 42.97 4.63
95 96 2.410774 CGTTTCTTGCTTTCAGCTCGAG 60.411 50.000 8.45 8.45 42.97 4.04
96 97 1.526887 CGTTTCTTGCTTTCAGCTCGA 59.473 47.619 0.00 0.00 42.97 4.04
97 98 1.261619 ACGTTTCTTGCTTTCAGCTCG 59.738 47.619 0.00 0.00 42.97 5.03
98 99 2.287915 TCACGTTTCTTGCTTTCAGCTC 59.712 45.455 0.00 0.00 42.97 4.09
99 100 2.288666 TCACGTTTCTTGCTTTCAGCT 58.711 42.857 0.00 0.00 42.97 4.24
100 101 2.755836 TCACGTTTCTTGCTTTCAGC 57.244 45.000 0.00 0.00 42.82 4.26
101 102 3.976942 CCAATCACGTTTCTTGCTTTCAG 59.023 43.478 0.00 0.00 0.00 3.02
102 103 3.243367 CCCAATCACGTTTCTTGCTTTCA 60.243 43.478 0.00 0.00 0.00 2.69
103 104 3.243401 ACCCAATCACGTTTCTTGCTTTC 60.243 43.478 0.00 0.00 0.00 2.62
104 105 2.693074 ACCCAATCACGTTTCTTGCTTT 59.307 40.909 0.00 0.00 0.00 3.51
105 106 2.293399 GACCCAATCACGTTTCTTGCTT 59.707 45.455 0.00 0.00 0.00 3.91
106 107 1.880027 GACCCAATCACGTTTCTTGCT 59.120 47.619 0.00 0.00 0.00 3.91
107 108 1.068541 GGACCCAATCACGTTTCTTGC 60.069 52.381 0.00 0.00 0.00 4.01
108 109 2.504367 AGGACCCAATCACGTTTCTTG 58.496 47.619 0.00 0.00 0.00 3.02
109 110 2.884639 CAAGGACCCAATCACGTTTCTT 59.115 45.455 0.00 0.00 0.00 2.52
110 111 2.105821 TCAAGGACCCAATCACGTTTCT 59.894 45.455 0.00 0.00 0.00 2.52
111 112 2.225727 GTCAAGGACCCAATCACGTTTC 59.774 50.000 0.00 0.00 0.00 2.78
112 113 2.227194 GTCAAGGACCCAATCACGTTT 58.773 47.619 0.00 0.00 0.00 3.60
113 114 1.142060 TGTCAAGGACCCAATCACGTT 59.858 47.619 0.00 0.00 0.00 3.99
114 115 0.762418 TGTCAAGGACCCAATCACGT 59.238 50.000 0.00 0.00 0.00 4.49
115 116 1.442769 CTGTCAAGGACCCAATCACG 58.557 55.000 0.00 0.00 0.00 4.35
116 117 1.168714 GCTGTCAAGGACCCAATCAC 58.831 55.000 0.00 0.00 0.00 3.06
117 118 0.038166 GGCTGTCAAGGACCCAATCA 59.962 55.000 0.00 0.00 0.00 2.57
118 119 1.026718 CGGCTGTCAAGGACCCAATC 61.027 60.000 0.00 0.00 0.00 2.67
119 120 1.002134 CGGCTGTCAAGGACCCAAT 60.002 57.895 0.00 0.00 0.00 3.16
120 121 2.429930 CGGCTGTCAAGGACCCAA 59.570 61.111 0.00 0.00 0.00 4.12
121 122 4.329545 GCGGCTGTCAAGGACCCA 62.330 66.667 0.00 0.00 0.00 4.51
122 123 4.021925 AGCGGCTGTCAAGGACCC 62.022 66.667 0.00 0.00 0.00 4.46
123 124 2.743928 CAGCGGCTGTCAAGGACC 60.744 66.667 21.60 0.00 0.00 4.46
124 125 3.426568 GCAGCGGCTGTCAAGGAC 61.427 66.667 28.88 8.66 36.96 3.85
125 126 4.704833 GGCAGCGGCTGTCAAGGA 62.705 66.667 28.30 0.00 35.96 3.36
131 132 4.722700 AAATCGGGCAGCGGCTGT 62.723 61.111 28.88 8.03 40.87 4.40
132 133 4.183686 CAAATCGGGCAGCGGCTG 62.184 66.667 25.21 25.21 40.87 4.85
133 134 3.918253 TTCAAATCGGGCAGCGGCT 62.918 57.895 9.17 0.00 40.87 5.52
134 135 3.439540 TTCAAATCGGGCAGCGGC 61.440 61.111 0.00 0.00 40.13 6.53
135 136 2.485122 GTTCAAATCGGGCAGCGG 59.515 61.111 0.00 0.00 0.00 5.52
136 137 1.982073 GAGGTTCAAATCGGGCAGCG 61.982 60.000 0.00 0.00 0.00 5.18
137 138 1.803289 GAGGTTCAAATCGGGCAGC 59.197 57.895 0.00 0.00 0.00 5.25
138 139 1.982073 GCGAGGTTCAAATCGGGCAG 61.982 60.000 0.00 0.00 39.31 4.85
139 140 2.038269 GCGAGGTTCAAATCGGGCA 61.038 57.895 0.00 0.00 39.31 5.36
140 141 2.761195 GGCGAGGTTCAAATCGGGC 61.761 63.158 0.00 0.00 39.31 6.13
141 142 2.461110 CGGCGAGGTTCAAATCGGG 61.461 63.158 0.00 0.00 39.31 5.14
142 143 1.693083 GACGGCGAGGTTCAAATCGG 61.693 60.000 16.62 0.00 39.31 4.18
143 144 1.708027 GACGGCGAGGTTCAAATCG 59.292 57.895 16.62 0.00 41.79 3.34
144 145 1.708027 CGACGGCGAGGTTCAAATC 59.292 57.895 16.62 0.00 40.82 2.17
145 146 2.388232 GCGACGGCGAGGTTCAAAT 61.388 57.895 18.90 0.00 40.82 2.32
146 147 3.039588 GCGACGGCGAGGTTCAAA 61.040 61.111 18.90 0.00 40.82 2.69
159 160 2.737376 GTGGTTCGTCCTGGCGAC 60.737 66.667 11.72 8.04 40.85 5.19
160 161 3.998672 GGTGGTTCGTCCTGGCGA 61.999 66.667 8.74 8.74 39.28 5.54
161 162 4.003788 AGGTGGTTCGTCCTGGCG 62.004 66.667 4.48 4.48 37.07 5.69
162 163 2.358737 CAGGTGGTTCGTCCTGGC 60.359 66.667 3.58 0.00 45.11 4.85
165 166 4.003788 CGCCAGGTGGTTCGTCCT 62.004 66.667 0.00 0.00 37.57 3.85
174 175 3.083600 GATTTCGTCGCGCCAGGTG 62.084 63.158 0.00 0.00 0.00 4.00
175 176 2.813908 GATTTCGTCGCGCCAGGT 60.814 61.111 0.00 0.00 0.00 4.00
176 177 2.094126 GATGATTTCGTCGCGCCAGG 62.094 60.000 0.00 0.00 0.00 4.45
177 178 1.273887 GATGATTTCGTCGCGCCAG 59.726 57.895 0.00 0.00 0.00 4.85
178 179 0.809636 ATGATGATTTCGTCGCGCCA 60.810 50.000 0.00 0.00 34.69 5.69
179 180 0.383491 CATGATGATTTCGTCGCGCC 60.383 55.000 0.00 0.00 34.69 6.53
180 181 0.383491 CCATGATGATTTCGTCGCGC 60.383 55.000 0.00 0.00 34.69 6.86
181 182 1.208259 TCCATGATGATTTCGTCGCG 58.792 50.000 0.00 0.00 34.69 5.87
182 183 2.600792 GCTTCCATGATGATTTCGTCGC 60.601 50.000 0.00 0.00 34.69 5.19
183 184 2.609002 TGCTTCCATGATGATTTCGTCG 59.391 45.455 0.00 0.00 34.69 5.12
184 185 4.274214 TGATGCTTCCATGATGATTTCGTC 59.726 41.667 0.00 0.00 0.00 4.20
185 186 4.036027 GTGATGCTTCCATGATGATTTCGT 59.964 41.667 0.00 0.00 0.00 3.85
186 187 4.275196 AGTGATGCTTCCATGATGATTTCG 59.725 41.667 0.00 0.00 0.00 3.46
187 188 5.769484 AGTGATGCTTCCATGATGATTTC 57.231 39.130 0.00 0.00 0.00 2.17
188 189 5.902681 CAAGTGATGCTTCCATGATGATTT 58.097 37.500 0.00 0.00 34.69 2.17
189 190 5.515797 CAAGTGATGCTTCCATGATGATT 57.484 39.130 0.00 0.00 34.69 2.57
203 204 0.376152 GCCATGACGAGCAAGTGATG 59.624 55.000 0.00 4.53 35.87 3.07
204 205 0.745845 GGCCATGACGAGCAAGTGAT 60.746 55.000 0.00 0.00 0.00 3.06
205 206 1.375908 GGCCATGACGAGCAAGTGA 60.376 57.895 0.00 0.00 0.00 3.41
206 207 0.957395 AAGGCCATGACGAGCAAGTG 60.957 55.000 5.01 0.00 0.00 3.16
207 208 0.250901 AAAGGCCATGACGAGCAAGT 60.251 50.000 5.01 0.00 0.00 3.16
208 209 0.169672 CAAAGGCCATGACGAGCAAG 59.830 55.000 5.01 0.00 0.00 4.01
209 210 0.250684 TCAAAGGCCATGACGAGCAA 60.251 50.000 5.01 0.00 0.00 3.91
210 211 0.250684 TTCAAAGGCCATGACGAGCA 60.251 50.000 5.01 0.00 0.00 4.26
211 212 0.169009 GTTCAAAGGCCATGACGAGC 59.831 55.000 5.01 0.00 0.00 5.03
212 213 1.466167 CAGTTCAAAGGCCATGACGAG 59.534 52.381 5.01 0.00 0.00 4.18
213 214 1.202758 ACAGTTCAAAGGCCATGACGA 60.203 47.619 5.01 0.00 0.00 4.20
214 215 1.238439 ACAGTTCAAAGGCCATGACG 58.762 50.000 5.01 3.10 0.00 4.35
215 216 2.362077 ACAACAGTTCAAAGGCCATGAC 59.638 45.455 5.01 4.47 0.00 3.06
216 217 2.665165 ACAACAGTTCAAAGGCCATGA 58.335 42.857 5.01 6.30 0.00 3.07
217 218 3.125316 CAACAACAGTTCAAAGGCCATG 58.875 45.455 5.01 3.36 0.00 3.66
218 219 2.102925 CCAACAACAGTTCAAAGGCCAT 59.897 45.455 5.01 0.00 0.00 4.40
219 220 1.480137 CCAACAACAGTTCAAAGGCCA 59.520 47.619 5.01 0.00 0.00 5.36
220 221 1.754226 TCCAACAACAGTTCAAAGGCC 59.246 47.619 0.00 0.00 0.00 5.19
221 222 3.119137 AGTTCCAACAACAGTTCAAAGGC 60.119 43.478 0.00 0.00 0.00 4.35
222 223 4.423732 CAGTTCCAACAACAGTTCAAAGG 58.576 43.478 0.00 0.00 0.00 3.11
223 224 3.859386 GCAGTTCCAACAACAGTTCAAAG 59.141 43.478 0.00 0.00 0.00 2.77
224 225 3.367910 GGCAGTTCCAACAACAGTTCAAA 60.368 43.478 0.00 0.00 34.01 2.69
225 226 2.165437 GGCAGTTCCAACAACAGTTCAA 59.835 45.455 0.00 0.00 34.01 2.69
226 227 1.748493 GGCAGTTCCAACAACAGTTCA 59.252 47.619 0.00 0.00 34.01 3.18
227 228 2.024414 AGGCAGTTCCAACAACAGTTC 58.976 47.619 0.00 0.00 37.29 3.01
228 229 2.024414 GAGGCAGTTCCAACAACAGTT 58.976 47.619 0.00 0.00 37.29 3.16
229 230 1.680338 GAGGCAGTTCCAACAACAGT 58.320 50.000 0.00 0.00 37.29 3.55
230 231 0.954452 GGAGGCAGTTCCAACAACAG 59.046 55.000 0.00 0.00 37.20 3.16
231 232 0.467290 GGGAGGCAGTTCCAACAACA 60.467 55.000 3.91 0.00 39.09 3.33
232 233 0.467290 TGGGAGGCAGTTCCAACAAC 60.467 55.000 3.91 0.00 39.09 3.32
233 234 0.482446 ATGGGAGGCAGTTCCAACAA 59.518 50.000 3.91 0.00 39.09 2.83
234 235 0.038166 GATGGGAGGCAGTTCCAACA 59.962 55.000 3.91 0.00 39.09 3.33
235 236 0.038166 TGATGGGAGGCAGTTCCAAC 59.962 55.000 3.91 0.00 39.09 3.77
236 237 0.329261 CTGATGGGAGGCAGTTCCAA 59.671 55.000 3.91 0.00 39.09 3.53
237 238 1.565390 CCTGATGGGAGGCAGTTCCA 61.565 60.000 3.91 0.00 39.09 3.53
238 239 1.225704 CCTGATGGGAGGCAGTTCC 59.774 63.158 0.00 0.00 37.23 3.62
239 240 4.972875 CCTGATGGGAGGCAGTTC 57.027 61.111 0.00 0.00 37.23 3.01
245 246 3.626996 TTGCGTGCCTGATGGGAGG 62.627 63.158 0.00 0.00 41.56 4.30
246 247 2.046023 TTGCGTGCCTGATGGGAG 60.046 61.111 0.00 0.00 37.23 4.30
247 248 2.046023 CTTGCGTGCCTGATGGGA 60.046 61.111 0.00 0.00 37.23 4.37
248 249 3.818787 GCTTGCGTGCCTGATGGG 61.819 66.667 0.00 0.00 38.36 4.00
256 257 1.639298 ATTCTTCTCGGCTTGCGTGC 61.639 55.000 0.00 0.00 0.00 5.34
257 258 0.095935 CATTCTTCTCGGCTTGCGTG 59.904 55.000 0.00 0.00 0.00 5.34
258 259 1.021390 CCATTCTTCTCGGCTTGCGT 61.021 55.000 0.00 0.00 0.00 5.24
259 260 0.740868 TCCATTCTTCTCGGCTTGCG 60.741 55.000 0.00 0.00 0.00 4.85
260 261 1.012841 CTCCATTCTTCTCGGCTTGC 58.987 55.000 0.00 0.00 0.00 4.01
261 262 2.275318 GACTCCATTCTTCTCGGCTTG 58.725 52.381 0.00 0.00 0.00 4.01
262 263 1.902508 TGACTCCATTCTTCTCGGCTT 59.097 47.619 0.00 0.00 0.00 4.35
263 264 1.480137 CTGACTCCATTCTTCTCGGCT 59.520 52.381 0.00 0.00 0.00 5.52
264 265 1.933247 CTGACTCCATTCTTCTCGGC 58.067 55.000 0.00 0.00 0.00 5.54
265 266 1.472376 GGCTGACTCCATTCTTCTCGG 60.472 57.143 0.00 0.00 0.00 4.63
266 267 1.205655 TGGCTGACTCCATTCTTCTCG 59.794 52.381 0.00 0.00 0.00 4.04
267 268 2.626840 GTGGCTGACTCCATTCTTCTC 58.373 52.381 0.00 0.00 38.57 2.87
268 269 1.280421 GGTGGCTGACTCCATTCTTCT 59.720 52.381 0.00 0.00 38.57 2.85
269 270 1.003580 TGGTGGCTGACTCCATTCTTC 59.996 52.381 0.00 0.00 37.80 2.87
270 271 1.067295 TGGTGGCTGACTCCATTCTT 58.933 50.000 0.00 0.00 37.80 2.52
271 272 2.777536 TGGTGGCTGACTCCATTCT 58.222 52.632 0.00 0.00 37.80 2.40
275 276 0.325933 CTGAATGGTGGCTGACTCCA 59.674 55.000 6.78 6.78 45.98 3.86
276 277 1.028868 GCTGAATGGTGGCTGACTCC 61.029 60.000 0.00 0.00 0.00 3.85
277 278 1.028868 GGCTGAATGGTGGCTGACTC 61.029 60.000 0.00 0.00 0.00 3.36
278 279 1.001641 GGCTGAATGGTGGCTGACT 60.002 57.895 0.00 0.00 0.00 3.41
279 280 1.303561 TGGCTGAATGGTGGCTGAC 60.304 57.895 0.00 0.00 0.00 3.51
280 281 1.001764 CTGGCTGAATGGTGGCTGA 60.002 57.895 0.00 0.00 0.00 4.26
281 282 0.609957 TTCTGGCTGAATGGTGGCTG 60.610 55.000 2.37 0.00 0.00 4.85
282 283 0.323178 CTTCTGGCTGAATGGTGGCT 60.323 55.000 7.30 0.00 33.71 4.75
283 284 0.322816 TCTTCTGGCTGAATGGTGGC 60.323 55.000 7.30 0.00 33.71 5.01
284 285 2.089980 CTTCTTCTGGCTGAATGGTGG 58.910 52.381 7.30 0.00 33.71 4.61
285 286 1.471684 GCTTCTTCTGGCTGAATGGTG 59.528 52.381 7.30 0.00 33.71 4.17
286 287 1.074405 TGCTTCTTCTGGCTGAATGGT 59.926 47.619 7.30 0.00 33.71 3.55
287 288 1.830279 TGCTTCTTCTGGCTGAATGG 58.170 50.000 7.30 0.00 33.71 3.16
288 289 3.928727 TTTGCTTCTTCTGGCTGAATG 57.071 42.857 7.30 2.87 33.71 2.67
289 290 3.305881 GCTTTTGCTTCTTCTGGCTGAAT 60.306 43.478 7.30 0.00 43.35 2.57
290 291 2.035066 GCTTTTGCTTCTTCTGGCTGAA 59.965 45.455 6.64 6.64 43.35 3.02
291 292 1.610522 GCTTTTGCTTCTTCTGGCTGA 59.389 47.619 0.00 0.00 43.35 4.26
292 293 2.061740 GCTTTTGCTTCTTCTGGCTG 57.938 50.000 0.00 0.00 43.35 4.85
305 306 1.758783 GGTCTTCGCAAGTGCTTTTG 58.241 50.000 1.21 0.00 39.32 2.44
306 307 0.307760 CGGTCTTCGCAAGTGCTTTT 59.692 50.000 1.21 0.00 39.32 2.27
307 308 1.507141 CCGGTCTTCGCAAGTGCTTT 61.507 55.000 1.21 0.00 39.32 3.51
308 309 1.961277 CCGGTCTTCGCAAGTGCTT 60.961 57.895 1.21 0.00 39.32 3.91
309 310 2.357517 CCGGTCTTCGCAAGTGCT 60.358 61.111 1.21 0.00 39.32 4.40
310 311 4.090057 GCCGGTCTTCGCAAGTGC 62.090 66.667 1.90 0.00 37.59 4.40
311 312 1.970917 GATGCCGGTCTTCGCAAGTG 61.971 60.000 1.90 0.00 37.59 3.16
312 313 1.741770 GATGCCGGTCTTCGCAAGT 60.742 57.895 1.90 0.00 37.59 3.16
313 314 2.464459 GGATGCCGGTCTTCGCAAG 61.464 63.158 1.90 0.00 37.59 4.01
314 315 2.435938 GGATGCCGGTCTTCGCAA 60.436 61.111 1.90 0.00 37.59 4.85
315 316 1.681486 TATGGATGCCGGTCTTCGCA 61.681 55.000 1.90 0.00 37.59 5.10
316 317 0.320771 ATATGGATGCCGGTCTTCGC 60.321 55.000 1.90 0.00 37.59 4.70
317 318 1.270305 ACATATGGATGCCGGTCTTCG 60.270 52.381 7.80 0.00 36.43 3.79
318 319 2.146342 CACATATGGATGCCGGTCTTC 58.854 52.381 7.80 3.28 36.43 2.87
319 320 2.260844 CACATATGGATGCCGGTCTT 57.739 50.000 7.80 0.00 36.43 3.01
330 331 2.013807 CAACGACGCCCACATATGG 58.986 57.895 7.80 0.00 46.81 2.74
331 332 1.089481 AGCAACGACGCCCACATATG 61.089 55.000 0.00 0.00 0.00 1.78
332 333 0.810031 GAGCAACGACGCCCACATAT 60.810 55.000 0.00 0.00 0.00 1.78
333 334 1.447140 GAGCAACGACGCCCACATA 60.447 57.895 0.00 0.00 0.00 2.29
334 335 2.742372 GAGCAACGACGCCCACAT 60.742 61.111 0.00 0.00 0.00 3.21
335 336 4.980805 GGAGCAACGACGCCCACA 62.981 66.667 0.00 0.00 0.00 4.17
336 337 4.980805 TGGAGCAACGACGCCCAC 62.981 66.667 0.00 0.00 30.32 4.61
337 338 4.980805 GTGGAGCAACGACGCCCA 62.981 66.667 0.00 0.00 32.10 5.36
339 340 4.980805 TGGTGGAGCAACGACGCC 62.981 66.667 0.00 0.00 35.40 5.68
340 341 2.443957 CTTTGGTGGAGCAACGACGC 62.444 60.000 0.00 0.00 0.00 5.19
341 342 0.878523 TCTTTGGTGGAGCAACGACG 60.879 55.000 0.00 0.00 0.00 5.12
342 343 0.868406 CTCTTTGGTGGAGCAACGAC 59.132 55.000 0.00 0.00 0.00 4.34
343 344 0.756294 TCTCTTTGGTGGAGCAACGA 59.244 50.000 0.00 0.00 0.00 3.85
344 345 0.868406 GTCTCTTTGGTGGAGCAACG 59.132 55.000 0.00 0.00 0.00 4.10
345 346 1.202818 AGGTCTCTTTGGTGGAGCAAC 60.203 52.381 0.00 0.00 0.00 4.17
346 347 1.072331 GAGGTCTCTTTGGTGGAGCAA 59.928 52.381 0.00 0.00 0.00 3.91
347 348 0.687354 GAGGTCTCTTTGGTGGAGCA 59.313 55.000 0.00 0.00 0.00 4.26
348 349 0.980423 AGAGGTCTCTTTGGTGGAGC 59.020 55.000 0.00 0.00 36.31 4.70
354 355 9.198984 TGAGCTTATCAGAAGAGGTCTCTTTGG 62.199 44.444 13.67 9.55 40.52 3.28
355 356 6.350864 TGAGCTTATCAGAAGAGGTCTCTTTG 60.351 42.308 13.67 12.93 40.52 2.77
356 357 5.719085 TGAGCTTATCAGAAGAGGTCTCTTT 59.281 40.000 13.67 2.07 40.52 2.52
357 358 5.268387 TGAGCTTATCAGAAGAGGTCTCTT 58.732 41.667 12.50 12.50 41.96 2.85
358 359 4.865905 TGAGCTTATCAGAAGAGGTCTCT 58.134 43.478 13.62 0.00 38.41 3.10
359 360 5.590530 TTGAGCTTATCAGAAGAGGTCTC 57.409 43.478 13.62 0.00 39.68 3.36
360 361 5.337975 GGTTTGAGCTTATCAGAAGAGGTCT 60.338 44.000 13.62 0.00 39.68 3.85
361 362 4.873259 GGTTTGAGCTTATCAGAAGAGGTC 59.127 45.833 8.09 8.09 39.68 3.85
362 363 4.534103 AGGTTTGAGCTTATCAGAAGAGGT 59.466 41.667 0.00 0.00 39.68 3.85
363 364 4.874966 CAGGTTTGAGCTTATCAGAAGAGG 59.125 45.833 0.00 0.00 39.68 3.69
364 365 5.580297 GTCAGGTTTGAGCTTATCAGAAGAG 59.420 44.000 0.00 0.00 39.68 2.85
365 366 5.482908 GTCAGGTTTGAGCTTATCAGAAGA 58.517 41.667 0.00 0.00 39.68 2.87
366 367 4.633565 GGTCAGGTTTGAGCTTATCAGAAG 59.366 45.833 0.00 0.00 45.95 2.85
367 368 4.579869 GGTCAGGTTTGAGCTTATCAGAA 58.420 43.478 0.00 0.00 45.95 3.02
368 369 4.207891 GGTCAGGTTTGAGCTTATCAGA 57.792 45.455 0.00 0.00 45.95 3.27
384 385 0.250640 AACTGAAGCCTGCAGGTCAG 60.251 55.000 35.12 35.12 41.49 3.51
385 386 0.183492 AAACTGAAGCCTGCAGGTCA 59.817 50.000 32.81 26.49 37.69 4.02
386 387 1.268079 GAAAACTGAAGCCTGCAGGTC 59.732 52.381 32.81 23.45 37.69 3.85
387 388 1.133668 AGAAAACTGAAGCCTGCAGGT 60.134 47.619 32.81 15.59 37.69 4.00
388 389 1.268899 CAGAAAACTGAAGCCTGCAGG 59.731 52.381 29.34 29.34 37.69 4.85
389 390 1.335689 GCAGAAAACTGAAGCCTGCAG 60.336 52.381 6.78 6.78 46.68 4.41
390 391 0.670162 GCAGAAAACTGAAGCCTGCA 59.330 50.000 0.00 0.00 46.68 4.41
391 392 0.386478 CGCAGAAAACTGAAGCCTGC 60.386 55.000 0.00 0.00 44.72 4.85
392 393 0.386478 GCGCAGAAAACTGAAGCCTG 60.386 55.000 0.30 0.00 0.00 4.85
393 394 1.518903 GGCGCAGAAAACTGAAGCCT 61.519 55.000 10.83 0.00 42.30 4.58
394 395 1.081175 GGCGCAGAAAACTGAAGCC 60.081 57.895 10.83 16.27 40.40 4.35
395 396 1.135944 GTAGGCGCAGAAAACTGAAGC 60.136 52.381 10.83 0.00 0.00 3.86
396 397 1.464997 GGTAGGCGCAGAAAACTGAAG 59.535 52.381 10.83 0.00 0.00 3.02
397 398 1.519408 GGTAGGCGCAGAAAACTGAA 58.481 50.000 10.83 0.00 0.00 3.02
398 399 0.321298 GGGTAGGCGCAGAAAACTGA 60.321 55.000 10.83 0.00 0.00 3.41
399 400 0.321653 AGGGTAGGCGCAGAAAACTG 60.322 55.000 10.83 0.00 0.00 3.16
400 401 0.321653 CAGGGTAGGCGCAGAAAACT 60.322 55.000 10.83 0.00 0.00 2.66
401 402 1.923227 GCAGGGTAGGCGCAGAAAAC 61.923 60.000 10.83 0.00 0.00 2.43
402 403 1.674322 GCAGGGTAGGCGCAGAAAA 60.674 57.895 10.83 0.00 0.00 2.29
403 404 2.046314 GCAGGGTAGGCGCAGAAA 60.046 61.111 10.83 0.00 0.00 2.52
404 405 3.003173 AGCAGGGTAGGCGCAGAA 61.003 61.111 10.83 0.00 36.08 3.02
405 406 3.461773 GAGCAGGGTAGGCGCAGA 61.462 66.667 10.83 0.00 36.08 4.26
406 407 4.537433 GGAGCAGGGTAGGCGCAG 62.537 72.222 10.83 0.00 36.08 5.18
408 409 4.228567 GAGGAGCAGGGTAGGCGC 62.229 72.222 0.00 0.00 36.08 6.53
409 410 3.905678 CGAGGAGCAGGGTAGGCG 61.906 72.222 0.00 0.00 36.08 5.52
410 411 2.760385 ACGAGGAGCAGGGTAGGC 60.760 66.667 0.00 0.00 0.00 3.93
411 412 2.128507 GGACGAGGAGCAGGGTAGG 61.129 68.421 0.00 0.00 0.00 3.18
412 413 1.379977 TGGACGAGGAGCAGGGTAG 60.380 63.158 0.00 0.00 0.00 3.18
413 414 1.681327 GTGGACGAGGAGCAGGGTA 60.681 63.158 0.00 0.00 0.00 3.69
414 415 2.997897 GTGGACGAGGAGCAGGGT 60.998 66.667 0.00 0.00 0.00 4.34
415 416 3.775654 GGTGGACGAGGAGCAGGG 61.776 72.222 0.00 0.00 0.00 4.45
416 417 2.303549 GATGGTGGACGAGGAGCAGG 62.304 65.000 0.00 0.00 0.00 4.85
417 418 1.142748 GATGGTGGACGAGGAGCAG 59.857 63.158 0.00 0.00 0.00 4.24
418 419 0.977627 ATGATGGTGGACGAGGAGCA 60.978 55.000 0.00 0.00 0.00 4.26
419 420 0.531532 CATGATGGTGGACGAGGAGC 60.532 60.000 0.00 0.00 0.00 4.70
420 421 0.105593 CCATGATGGTGGACGAGGAG 59.894 60.000 2.54 0.00 42.02 3.69
421 422 2.211375 CCATGATGGTGGACGAGGA 58.789 57.895 2.54 0.00 42.02 3.71
422 423 4.863707 CCATGATGGTGGACGAGG 57.136 61.111 2.54 0.00 42.02 4.63
431 432 5.132502 TGTTTTATCAGGCTACCATGATGG 58.867 41.667 10.53 10.53 45.02 3.51
432 433 6.698008 TTGTTTTATCAGGCTACCATGATG 57.302 37.500 0.00 0.00 36.81 3.07
433 434 5.300286 GCTTGTTTTATCAGGCTACCATGAT 59.700 40.000 0.00 0.00 39.44 2.45
434 435 4.640201 GCTTGTTTTATCAGGCTACCATGA 59.360 41.667 0.00 0.00 37.43 3.07
435 436 4.398988 TGCTTGTTTTATCAGGCTACCATG 59.601 41.667 0.00 0.00 40.32 3.66
436 437 4.599041 TGCTTGTTTTATCAGGCTACCAT 58.401 39.130 0.00 0.00 40.32 3.55
437 438 4.009675 CTGCTTGTTTTATCAGGCTACCA 58.990 43.478 0.00 0.00 40.32 3.25
438 439 3.181496 GCTGCTTGTTTTATCAGGCTACC 60.181 47.826 0.00 0.00 40.32 3.18
439 440 3.440173 TGCTGCTTGTTTTATCAGGCTAC 59.560 43.478 0.00 0.00 40.32 3.58
440 441 3.684908 TGCTGCTTGTTTTATCAGGCTA 58.315 40.909 0.00 0.00 40.32 3.93
441 442 2.490903 CTGCTGCTTGTTTTATCAGGCT 59.509 45.455 0.00 0.00 40.32 4.58
442 443 2.872370 CTGCTGCTTGTTTTATCAGGC 58.128 47.619 0.00 0.00 40.13 4.85
443 444 2.229543 TGCTGCTGCTTGTTTTATCAGG 59.770 45.455 17.00 0.00 40.48 3.86
444 445 3.189910 TCTGCTGCTGCTTGTTTTATCAG 59.810 43.478 17.00 1.81 40.48 2.90
445 446 3.148412 TCTGCTGCTGCTTGTTTTATCA 58.852 40.909 17.00 0.00 40.48 2.15
446 447 3.837213 TCTGCTGCTGCTTGTTTTATC 57.163 42.857 17.00 0.00 40.48 1.75
447 448 3.119245 CCATCTGCTGCTGCTTGTTTTAT 60.119 43.478 17.00 0.00 40.48 1.40
448 449 2.229543 CCATCTGCTGCTGCTTGTTTTA 59.770 45.455 17.00 0.00 40.48 1.52
449 450 1.000506 CCATCTGCTGCTGCTTGTTTT 59.999 47.619 17.00 0.00 40.48 2.43
450 451 0.601558 CCATCTGCTGCTGCTTGTTT 59.398 50.000 17.00 0.67 40.48 2.83
451 452 0.251033 TCCATCTGCTGCTGCTTGTT 60.251 50.000 17.00 2.58 40.48 2.83
452 453 0.034380 ATCCATCTGCTGCTGCTTGT 60.034 50.000 17.00 0.00 40.48 3.16
453 454 0.382158 CATCCATCTGCTGCTGCTTG 59.618 55.000 17.00 11.05 40.48 4.01
454 455 0.034380 ACATCCATCTGCTGCTGCTT 60.034 50.000 17.00 0.00 40.48 3.91
455 456 0.464013 GACATCCATCTGCTGCTGCT 60.464 55.000 17.00 0.00 40.48 4.24
456 457 1.445716 GGACATCCATCTGCTGCTGC 61.446 60.000 8.89 8.89 36.38 5.25
457 458 0.180642 AGGACATCCATCTGCTGCTG 59.819 55.000 0.00 0.00 38.89 4.41
458 459 0.469070 GAGGACATCCATCTGCTGCT 59.531 55.000 0.00 0.00 38.89 4.24
459 460 3.003740 GAGGACATCCATCTGCTGC 57.996 57.895 0.00 0.00 38.89 5.25
469 470 2.094100 TCCCTGATCTGGAGGACATC 57.906 55.000 19.59 0.00 31.48 3.06
470 471 2.122768 GTTCCCTGATCTGGAGGACAT 58.877 52.381 19.59 0.00 32.37 3.06
471 472 1.203300 TGTTCCCTGATCTGGAGGACA 60.203 52.381 19.59 16.12 32.37 4.02
472 473 1.208293 GTGTTCCCTGATCTGGAGGAC 59.792 57.143 19.59 14.00 32.37 3.85
473 474 1.573108 GTGTTCCCTGATCTGGAGGA 58.427 55.000 19.59 6.83 32.37 3.71
474 475 0.543749 GGTGTTCCCTGATCTGGAGG 59.456 60.000 19.59 5.41 32.37 4.30
475 476 1.279496 TGGTGTTCCCTGATCTGGAG 58.721 55.000 19.59 9.94 32.37 3.86
476 477 1.839994 GATGGTGTTCCCTGATCTGGA 59.160 52.381 19.59 10.10 0.00 3.86
477 478 1.473965 CGATGGTGTTCCCTGATCTGG 60.474 57.143 11.58 11.58 0.00 3.86
478 479 1.945387 CGATGGTGTTCCCTGATCTG 58.055 55.000 0.00 0.00 0.00 2.90
479 480 0.179000 GCGATGGTGTTCCCTGATCT 59.821 55.000 0.00 0.00 0.00 2.75
480 481 0.107703 TGCGATGGTGTTCCCTGATC 60.108 55.000 0.00 0.00 0.00 2.92
481 482 0.392998 GTGCGATGGTGTTCCCTGAT 60.393 55.000 0.00 0.00 0.00 2.90
482 483 1.003839 GTGCGATGGTGTTCCCTGA 60.004 57.895 0.00 0.00 0.00 3.86
483 484 1.003355 AGTGCGATGGTGTTCCCTG 60.003 57.895 0.00 0.00 0.00 4.45
484 485 1.003355 CAGTGCGATGGTGTTCCCT 60.003 57.895 0.00 0.00 0.00 4.20
485 486 0.605319 TTCAGTGCGATGGTGTTCCC 60.605 55.000 0.00 0.00 0.00 3.97
486 487 1.069227 GTTTCAGTGCGATGGTGTTCC 60.069 52.381 0.00 0.00 0.00 3.62
487 488 1.398451 CGTTTCAGTGCGATGGTGTTC 60.398 52.381 0.00 0.00 0.00 3.18
488 489 0.586319 CGTTTCAGTGCGATGGTGTT 59.414 50.000 0.00 0.00 0.00 3.32
489 490 0.249699 TCGTTTCAGTGCGATGGTGT 60.250 50.000 0.00 0.00 31.76 4.16
490 491 0.439985 CTCGTTTCAGTGCGATGGTG 59.560 55.000 0.00 0.00 36.50 4.17
491 492 1.291877 GCTCGTTTCAGTGCGATGGT 61.292 55.000 0.00 0.00 36.50 3.55
492 493 1.016130 AGCTCGTTTCAGTGCGATGG 61.016 55.000 0.00 0.00 36.50 3.51
493 494 0.792640 AAGCTCGTTTCAGTGCGATG 59.207 50.000 0.00 0.00 36.50 3.84
494 495 2.363788 TAAGCTCGTTTCAGTGCGAT 57.636 45.000 0.00 0.00 36.50 4.58
495 496 2.259618 GATAAGCTCGTTTCAGTGCGA 58.740 47.619 0.00 0.00 35.95 5.10
496 497 1.324736 GGATAAGCTCGTTTCAGTGCG 59.675 52.381 0.00 0.00 35.95 5.34
497 498 2.346803 TGGATAAGCTCGTTTCAGTGC 58.653 47.619 0.00 0.00 0.00 4.40
498 499 3.372206 CCTTGGATAAGCTCGTTTCAGTG 59.628 47.826 0.00 0.00 32.40 3.66
499 500 3.600388 CCTTGGATAAGCTCGTTTCAGT 58.400 45.455 0.00 0.00 32.40 3.41
500 501 2.352960 GCCTTGGATAAGCTCGTTTCAG 59.647 50.000 0.00 0.00 32.40 3.02
501 502 2.356135 GCCTTGGATAAGCTCGTTTCA 58.644 47.619 0.00 0.00 32.40 2.69
502 503 1.327764 CGCCTTGGATAAGCTCGTTTC 59.672 52.381 0.00 0.00 32.40 2.78
503 504 1.066430 TCGCCTTGGATAAGCTCGTTT 60.066 47.619 0.00 0.00 33.28 3.60
504 505 0.535335 TCGCCTTGGATAAGCTCGTT 59.465 50.000 0.00 0.00 33.28 3.85
505 506 0.753262 ATCGCCTTGGATAAGCTCGT 59.247 50.000 0.00 0.00 33.28 4.18
506 507 1.000283 AGATCGCCTTGGATAAGCTCG 60.000 52.381 0.00 0.00 32.40 5.03
507 508 2.805099 CAAGATCGCCTTGGATAAGCTC 59.195 50.000 8.83 0.00 46.54 4.09
508 509 2.843701 CAAGATCGCCTTGGATAAGCT 58.156 47.619 8.83 0.00 46.54 3.74
523 524 0.179000 GGTGTCGGATCTGGCAAGAT 59.821 55.000 11.18 2.24 46.23 2.40
524 525 0.904865 AGGTGTCGGATCTGGCAAGA 60.905 55.000 11.18 0.00 36.69 3.02
525 526 0.036010 AAGGTGTCGGATCTGGCAAG 60.036 55.000 11.18 0.00 0.00 4.01
526 527 0.036388 GAAGGTGTCGGATCTGGCAA 60.036 55.000 11.18 0.00 0.00 4.52
527 528 1.596934 GAAGGTGTCGGATCTGGCA 59.403 57.895 4.25 4.25 0.00 4.92
528 529 1.153349 GGAAGGTGTCGGATCTGGC 60.153 63.158 0.00 0.00 0.00 4.85
529 530 0.108138 GTGGAAGGTGTCGGATCTGG 60.108 60.000 0.62 0.00 0.00 3.86
530 531 0.898320 AGTGGAAGGTGTCGGATCTG 59.102 55.000 0.00 0.00 0.00 2.90
531 532 1.187087 GAGTGGAAGGTGTCGGATCT 58.813 55.000 0.00 0.00 0.00 2.75
532 533 1.135333 GAGAGTGGAAGGTGTCGGATC 59.865 57.143 0.00 0.00 0.00 3.36
533 534 1.187087 GAGAGTGGAAGGTGTCGGAT 58.813 55.000 0.00 0.00 0.00 4.18
534 535 0.898789 GGAGAGTGGAAGGTGTCGGA 60.899 60.000 0.00 0.00 0.00 4.55
535 536 1.592223 GGAGAGTGGAAGGTGTCGG 59.408 63.158 0.00 0.00 0.00 4.79
536 537 1.592223 GGGAGAGTGGAAGGTGTCG 59.408 63.158 0.00 0.00 0.00 4.35
537 538 1.554583 GGGGGAGAGTGGAAGGTGTC 61.555 65.000 0.00 0.00 0.00 3.67
538 539 1.539124 GGGGGAGAGTGGAAGGTGT 60.539 63.158 0.00 0.00 0.00 4.16
539 540 1.538876 TGGGGGAGAGTGGAAGGTG 60.539 63.158 0.00 0.00 0.00 4.00
540 541 1.539124 GTGGGGGAGAGTGGAAGGT 60.539 63.158 0.00 0.00 0.00 3.50
541 542 2.301738 GGTGGGGGAGAGTGGAAGG 61.302 68.421 0.00 0.00 0.00 3.46
542 543 0.916358 ATGGTGGGGGAGAGTGGAAG 60.916 60.000 0.00 0.00 0.00 3.46
543 544 1.163309 ATGGTGGGGGAGAGTGGAA 59.837 57.895 0.00 0.00 0.00 3.53
544 545 1.616327 CATGGTGGGGGAGAGTGGA 60.616 63.158 0.00 0.00 0.00 4.02
545 546 2.683465 CCATGGTGGGGGAGAGTGG 61.683 68.421 2.57 0.00 32.67 4.00
546 547 3.001514 CCATGGTGGGGGAGAGTG 58.998 66.667 2.57 0.00 32.67 3.51
555 556 1.214305 TCTTCCTTCCCCCATGGTGG 61.214 60.000 6.98 6.98 37.25 4.61
556 557 0.704076 TTCTTCCTTCCCCCATGGTG 59.296 55.000 11.73 0.00 34.77 4.17
557 558 1.002857 CTTCTTCCTTCCCCCATGGT 58.997 55.000 11.73 0.00 34.77 3.55
558 559 1.064389 GTCTTCTTCCTTCCCCCATGG 60.064 57.143 4.14 4.14 0.00 3.66
559 560 1.407437 CGTCTTCTTCCTTCCCCCATG 60.407 57.143 0.00 0.00 0.00 3.66
560 561 0.912486 CGTCTTCTTCCTTCCCCCAT 59.088 55.000 0.00 0.00 0.00 4.00
561 562 0.178915 TCGTCTTCTTCCTTCCCCCA 60.179 55.000 0.00 0.00 0.00 4.96
562 563 0.249676 GTCGTCTTCTTCCTTCCCCC 59.750 60.000 0.00 0.00 0.00 5.40
563 564 0.249676 GGTCGTCTTCTTCCTTCCCC 59.750 60.000 0.00 0.00 0.00 4.81
564 565 0.974383 TGGTCGTCTTCTTCCTTCCC 59.026 55.000 0.00 0.00 0.00 3.97
565 566 1.673329 GCTGGTCGTCTTCTTCCTTCC 60.673 57.143 0.00 0.00 0.00 3.46
566 567 1.000955 TGCTGGTCGTCTTCTTCCTTC 59.999 52.381 0.00 0.00 0.00 3.46
567 568 1.048601 TGCTGGTCGTCTTCTTCCTT 58.951 50.000 0.00 0.00 0.00 3.36
568 569 0.318762 GTGCTGGTCGTCTTCTTCCT 59.681 55.000 0.00 0.00 0.00 3.36
569 570 0.670854 GGTGCTGGTCGTCTTCTTCC 60.671 60.000 0.00 0.00 0.00 3.46
570 571 1.009389 CGGTGCTGGTCGTCTTCTTC 61.009 60.000 0.00 0.00 0.00 2.87
571 572 1.006102 CGGTGCTGGTCGTCTTCTT 60.006 57.895 0.00 0.00 0.00 2.52
572 573 2.651361 CGGTGCTGGTCGTCTTCT 59.349 61.111 0.00 0.00 0.00 2.85
573 574 2.432628 CCGGTGCTGGTCGTCTTC 60.433 66.667 0.00 0.00 0.00 2.87
574 575 4.681978 GCCGGTGCTGGTCGTCTT 62.682 66.667 1.90 0.00 33.53 3.01
581 582 3.958147 CTAGTGGTGCCGGTGCTGG 62.958 68.421 1.90 0.00 38.71 4.85
582 583 2.434884 CTAGTGGTGCCGGTGCTG 60.435 66.667 1.90 0.00 38.71 4.41
583 584 2.603473 TCTAGTGGTGCCGGTGCT 60.603 61.111 1.90 0.00 38.71 4.40
584 585 2.434359 GTCTAGTGGTGCCGGTGC 60.434 66.667 1.90 0.00 38.26 5.01
585 586 1.374252 GTGTCTAGTGGTGCCGGTG 60.374 63.158 1.90 0.00 0.00 4.94
586 587 0.251474 TAGTGTCTAGTGGTGCCGGT 60.251 55.000 1.90 0.00 0.00 5.28
587 588 0.172803 GTAGTGTCTAGTGGTGCCGG 59.827 60.000 0.00 0.00 0.00 6.13
588 589 1.132643 GAGTAGTGTCTAGTGGTGCCG 59.867 57.143 0.00 0.00 0.00 5.69
589 590 1.132643 CGAGTAGTGTCTAGTGGTGCC 59.867 57.143 0.00 0.00 0.00 5.01
590 591 2.082231 TCGAGTAGTGTCTAGTGGTGC 58.918 52.381 0.00 0.00 0.00 5.01
591 592 3.597255 TCTCGAGTAGTGTCTAGTGGTG 58.403 50.000 13.13 0.00 0.00 4.17
592 593 3.514706 TCTCTCGAGTAGTGTCTAGTGGT 59.485 47.826 13.13 0.00 0.00 4.16
593 594 4.116961 CTCTCTCGAGTAGTGTCTAGTGG 58.883 52.174 13.13 0.00 32.47 4.00
607 608 9.947669 GTAGTTTTATGCTATTTACTCTCTCGA 57.052 33.333 0.00 0.00 0.00 4.04
608 609 9.953697 AGTAGTTTTATGCTATTTACTCTCTCG 57.046 33.333 0.00 0.00 0.00 4.04
807 810 2.074230 TAACGGCCGTCAACTGTCGT 62.074 55.000 34.29 15.38 42.86 4.34
880 889 0.378962 GAGAGTGAGCGAGCGTGTAT 59.621 55.000 0.00 0.00 0.00 2.29
881 890 0.673956 AGAGAGTGAGCGAGCGTGTA 60.674 55.000 0.00 0.00 0.00 2.90
928 955 1.682684 CTCGTACTGGAGCAGGGGT 60.683 63.158 0.00 0.00 35.51 4.95
1033 1061 2.529389 AACCCCGCACTCCTCCTT 60.529 61.111 0.00 0.00 0.00 3.36
1046 1074 1.378514 ATGTCCATGCCGACAACCC 60.379 57.895 8.59 0.00 45.49 4.11
1054 1082 2.233271 CATAAGTCCCATGTCCATGCC 58.767 52.381 1.64 0.00 37.49 4.40
1139 1168 5.611374 ACAACACTACACTAAGCAACATCT 58.389 37.500 0.00 0.00 0.00 2.90
1264 1301 6.172630 GCACTGTTCATTAAATCCCCAAATT 58.827 36.000 0.00 0.00 0.00 1.82
1298 1353 5.048083 GGTTTCAATCTGCACTCAATACCAA 60.048 40.000 0.00 0.00 0.00 3.67
1368 1423 0.040204 CCACAGAAAAGGGGCTCCAT 59.960 55.000 4.79 0.00 34.83 3.41
1401 1456 1.064906 CAGGATGCACTTGGGATGAGT 60.065 52.381 0.00 0.00 0.00 3.41
1418 1473 1.841302 TAGGCCTCAGTTGGTGCAGG 61.841 60.000 9.68 0.00 0.00 4.85
1489 1544 0.912486 GCATCTAACCTGGACTGGGT 59.088 55.000 0.00 0.00 38.94 4.51
1694 1761 9.856162 ACAAAAGGACTAGTACCTTATTTCAAA 57.144 29.630 20.24 0.00 45.55 2.69
1869 1936 5.755849 ACTCCTTCTCAAACTTTTCCTTGA 58.244 37.500 0.00 0.00 0.00 3.02
2649 2782 3.426615 CACTAAGCCCAATTACCCACAA 58.573 45.455 0.00 0.00 0.00 3.33
3190 3414 8.986991 AGTCTCATAGATTACATCCAAAACTCT 58.013 33.333 0.00 0.00 0.00 3.24
3295 3543 3.689347 AGAGCACTGACCAAATGCATAA 58.311 40.909 0.00 0.00 41.97 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.