Multiple sequence alignment - TraesCS2A01G162500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G162500 chr2A 100.000 3320 0 0 1 3320 115093760 115097079 0.000000e+00 6131.0
1 TraesCS2A01G162500 chr2A 91.534 1004 79 3 1334 2337 114498414 114497417 0.000000e+00 1378.0
2 TraesCS2A01G162500 chr2A 93.767 369 20 1 978 1343 114499270 114498902 4.840000e-153 551.0
3 TraesCS2A01G162500 chr2A 87.500 448 51 5 2674 3119 98156960 98156516 2.280000e-141 512.0
4 TraesCS2A01G162500 chr2A 92.405 316 21 3 2674 2987 768471755 768472069 6.530000e-122 448.0
5 TraesCS2A01G162500 chr2A 95.000 280 14 0 2672 2951 140578133 140578412 1.090000e-119 440.0
6 TraesCS2A01G162500 chr2A 85.598 368 27 13 556 915 114503753 114503404 2.430000e-96 363.0
7 TraesCS2A01G162500 chr2D 93.013 1746 69 21 618 2341 113480127 113481841 0.000000e+00 2499.0
8 TraesCS2A01G162500 chr2D 92.018 1353 93 3 982 2334 113091346 113092683 0.000000e+00 1886.0
9 TraesCS2A01G162500 chr2D 91.193 545 45 2 2672 3216 52965070 52964529 0.000000e+00 737.0
10 TraesCS2A01G162500 chr2D 88.843 242 16 8 705 942 113090982 113091216 1.510000e-73 287.0
11 TraesCS2A01G162500 chr2D 89.270 233 20 4 2447 2675 113481838 113482069 1.510000e-73 287.0
12 TraesCS2A01G162500 chr2D 96.923 65 0 2 557 620 113480030 113480093 1.260000e-19 108.0
13 TraesCS2A01G162500 chr2B 93.957 1539 63 6 823 2341 163977058 163978586 0.000000e+00 2300.0
14 TraesCS2A01G162500 chr2B 92.239 1353 90 3 982 2334 163741774 163743111 0.000000e+00 1903.0
15 TraesCS2A01G162500 chr2B 86.441 472 55 9 2748 3214 64187233 64186766 2.950000e-140 508.0
16 TraesCS2A01G162500 chr2B 86.650 397 27 14 556 942 163741262 163741642 1.840000e-112 416.0
17 TraesCS2A01G162500 chr2B 87.048 332 28 12 556 880 163736694 163737017 8.760000e-96 361.0
18 TraesCS2A01G162500 chr2B 94.857 175 6 3 2446 2619 163978590 163978762 1.520000e-68 270.0
19 TraesCS2A01G162500 chr2B 90.526 190 13 3 623 812 163976823 163977007 2.560000e-61 246.0
20 TraesCS2A01G162500 chr2B 95.385 65 1 2 557 620 163976716 163976779 5.860000e-18 102.0
21 TraesCS2A01G162500 chr3A 85.641 1358 148 23 974 2325 100847767 100849083 0.000000e+00 1384.0
22 TraesCS2A01G162500 chr3A 89.119 386 40 2 2832 3216 587390180 587389796 2.320000e-131 479.0
23 TraesCS2A01G162500 chr3A 97.436 117 2 1 2339 2455 256934798 256934683 7.260000e-47 198.0
24 TraesCS2A01G162500 chr3A 95.652 115 5 0 2341 2455 658713163 658713049 5.660000e-43 185.0
25 TraesCS2A01G162500 chr3B 87.740 1093 131 3 1233 2325 132910201 132911290 0.000000e+00 1273.0
26 TraesCS2A01G162500 chr3B 85.714 1043 140 5 1289 2325 132052916 132051877 0.000000e+00 1092.0
27 TraesCS2A01G162500 chr3B 86.151 982 133 3 1215 2196 132956183 132957161 0.000000e+00 1057.0
28 TraesCS2A01G162500 chr3B 96.552 58 2 0 2268 2325 132957158 132957215 2.730000e-16 97.1
29 TraesCS2A01G162500 chrUn 83.348 1105 154 20 1219 2320 34009833 34010910 0.000000e+00 994.0
30 TraesCS2A01G162500 chrUn 80.967 1324 185 38 1000 2320 34465372 34464113 0.000000e+00 987.0
31 TraesCS2A01G162500 chrUn 98.182 110 2 0 2343 2452 352766983 352766874 3.380000e-45 193.0
32 TraesCS2A01G162500 chrUn 98.148 108 2 0 2343 2450 11239800 11239907 4.370000e-44 189.0
33 TraesCS2A01G162500 chrUn 98.113 106 2 0 2345 2450 30406060 30405955 5.660000e-43 185.0
34 TraesCS2A01G162500 chrUn 96.429 112 4 0 2339 2450 218382245 218382134 5.660000e-43 185.0
35 TraesCS2A01G162500 chrUn 96.429 112 4 0 2339 2450 218399793 218399682 5.660000e-43 185.0
36 TraesCS2A01G162500 chrUn 97.222 108 3 0 2343 2450 103936301 103936194 2.030000e-42 183.0
37 TraesCS2A01G162500 chrUn 96.296 108 4 0 2343 2450 338020906 338020799 9.460000e-41 178.0
38 TraesCS2A01G162500 chrUn 95.495 111 4 1 2339 2449 27987410 27987519 3.400000e-40 176.0
39 TraesCS2A01G162500 chrUn 93.913 115 7 0 2343 2457 218481706 218481592 1.220000e-39 174.0
40 TraesCS2A01G162500 chr5A 88.624 545 52 5 2674 3214 650689996 650690534 0.000000e+00 654.0
41 TraesCS2A01G162500 chr5A 96.667 120 3 1 2332 2451 69844904 69844786 7.260000e-47 198.0
42 TraesCS2A01G162500 chr4D 84.008 494 58 18 2738 3216 498569719 498569232 3.900000e-124 455.0
43 TraesCS2A01G162500 chr4D 85.034 441 54 11 2785 3216 498565274 498564837 3.930000e-119 438.0
44 TraesCS2A01G162500 chr4D 99.074 108 1 0 2343 2450 317234621 317234728 9.400000e-46 195.0
45 TraesCS2A01G162500 chr4A 86.047 430 51 8 2738 3162 15128798 15128373 1.400000e-123 453.0
46 TraesCS2A01G162500 chr4A 85.213 399 53 6 2832 3227 200055904 200056299 3.990000e-109 405.0
47 TraesCS2A01G162500 chr4A 96.639 119 2 2 2340 2456 416232568 416232450 2.610000e-46 196.0
48 TraesCS2A01G162500 chr6A 98.261 115 2 0 2339 2453 183352121 183352235 5.620000e-48 202.0
49 TraesCS2A01G162500 chr5D 98.246 114 2 0 2338 2451 424123544 424123657 2.020000e-47 200.0
50 TraesCS2A01G162500 chr5D 95.082 122 3 3 2336 2456 134808267 134808386 4.370000e-44 189.0
51 TraesCS2A01G162500 chr1D 98.246 114 1 1 2339 2452 227655308 227655420 7.260000e-47 198.0
52 TraesCS2A01G162500 chr1D 99.074 108 1 0 2342 2449 247521065 247520958 9.400000e-46 195.0
53 TraesCS2A01G162500 chr1D 97.321 112 3 0 2342 2453 420003 420114 1.220000e-44 191.0
54 TraesCS2A01G162500 chr1D 97.321 112 3 0 2343 2454 447959571 447959460 1.220000e-44 191.0
55 TraesCS2A01G162500 chr1B 97.436 117 1 2 2338 2454 687253939 687254053 7.260000e-47 198.0
56 TraesCS2A01G162500 chr1B 96.581 117 2 2 2338 2454 651523701 651523587 3.380000e-45 193.0
57 TraesCS2A01G162500 chr7D 98.230 113 1 1 2342 2454 474273737 474273626 2.610000e-46 196.0
58 TraesCS2A01G162500 chr7D 95.763 118 4 1 2343 2460 379324237 379324121 4.370000e-44 189.0
59 TraesCS2A01G162500 chr6D 97.414 116 1 2 2337 2452 455884124 455884011 2.610000e-46 196.0
60 TraesCS2A01G162500 chr6D 98.182 110 2 0 2342 2451 298921091 298920982 3.380000e-45 193.0
61 TraesCS2A01G162500 chr6D 99.065 107 1 0 2343 2449 468640999 468640893 3.380000e-45 193.0
62 TraesCS2A01G162500 chr6D 97.321 112 3 0 2342 2453 435974456 435974345 1.220000e-44 191.0
63 TraesCS2A01G162500 chr6D 97.248 109 3 0 2342 2450 38346434 38346326 5.660000e-43 185.0
64 TraesCS2A01G162500 chr3D 99.083 109 1 0 2343 2451 606889393 606889285 2.610000e-46 196.0
65 TraesCS2A01G162500 chr3D 98.198 111 2 0 2342 2452 350668496 350668386 9.400000e-46 195.0
66 TraesCS2A01G162500 chr3D 92.913 127 8 1 2343 2469 339050182 339050057 2.030000e-42 183.0
67 TraesCS2A01G162500 chr5B 96.610 118 3 1 2333 2450 278886871 278886987 9.400000e-46 195.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G162500 chr2A 115093760 115097079 3319 False 6131.000000 6131 100.000000 1 3320 1 chr2A.!!$F1 3319
1 TraesCS2A01G162500 chr2A 114497417 114499270 1853 True 964.500000 1378 92.650500 978 2337 2 chr2A.!!$R3 1359
2 TraesCS2A01G162500 chr2D 113090982 113092683 1701 False 1086.500000 1886 90.430500 705 2334 2 chr2D.!!$F1 1629
3 TraesCS2A01G162500 chr2D 113480030 113482069 2039 False 964.666667 2499 93.068667 557 2675 3 chr2D.!!$F2 2118
4 TraesCS2A01G162500 chr2D 52964529 52965070 541 True 737.000000 737 91.193000 2672 3216 1 chr2D.!!$R1 544
5 TraesCS2A01G162500 chr2B 163741262 163743111 1849 False 1159.500000 1903 89.444500 556 2334 2 chr2B.!!$F2 1778
6 TraesCS2A01G162500 chr2B 163976716 163978762 2046 False 729.500000 2300 93.681250 557 2619 4 chr2B.!!$F3 2062
7 TraesCS2A01G162500 chr3A 100847767 100849083 1316 False 1384.000000 1384 85.641000 974 2325 1 chr3A.!!$F1 1351
8 TraesCS2A01G162500 chr3B 132910201 132911290 1089 False 1273.000000 1273 87.740000 1233 2325 1 chr3B.!!$F1 1092
9 TraesCS2A01G162500 chr3B 132051877 132052916 1039 True 1092.000000 1092 85.714000 1289 2325 1 chr3B.!!$R1 1036
10 TraesCS2A01G162500 chr3B 132956183 132957215 1032 False 577.050000 1057 91.351500 1215 2325 2 chr3B.!!$F2 1110
11 TraesCS2A01G162500 chrUn 34009833 34010910 1077 False 994.000000 994 83.348000 1219 2320 1 chrUn.!!$F3 1101
12 TraesCS2A01G162500 chrUn 34464113 34465372 1259 True 987.000000 987 80.967000 1000 2320 1 chrUn.!!$R2 1320
13 TraesCS2A01G162500 chr5A 650689996 650690534 538 False 654.000000 654 88.624000 2674 3214 1 chr5A.!!$F1 540
14 TraesCS2A01G162500 chr4D 498564837 498569719 4882 True 446.500000 455 84.521000 2738 3216 2 chr4D.!!$R1 478

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
265 266 0.032952 TGTTGCTCTGTACGTGGTCC 59.967 55.0 0.0 0.0 0.00 4.46 F
501 502 0.105964 TACCGATGGAGGGCAAATCG 59.894 55.0 0.0 0.0 42.14 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2168 2872 0.179184 GCAGAACGACGAGTCCTCTC 60.179 60.000 0.0 0.0 37.35 3.20 R
2350 3054 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.0 0.0 0.00 4.44 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 9.387123 TGAAATTTTAAAACTGTTTGTGTTTGC 57.613 25.926 6.53 0.00 37.64 3.68
89 90 9.387123 GAAATTTTAAAACTGTTTGTGTTTGCA 57.613 25.926 6.53 0.00 37.64 4.08
90 91 9.736023 AAATTTTAAAACTGTTTGTGTTTGCAA 57.264 22.222 6.53 0.00 37.64 4.08
91 92 9.736023 AATTTTAAAACTGTTTGTGTTTGCAAA 57.264 22.222 8.05 8.05 37.64 3.68
92 93 9.736023 ATTTTAAAACTGTTTGTGTTTGCAAAA 57.264 22.222 14.67 1.61 39.65 2.44
93 94 9.567848 TTTTAAAACTGTTTGTGTTTGCAAAAA 57.432 22.222 14.67 5.49 39.65 1.94
94 95 9.736023 TTTAAAACTGTTTGTGTTTGCAAAAAT 57.264 22.222 14.67 0.00 39.65 1.82
97 98 9.905171 AAAACTGTTTGTGTTTGCAAAAATATT 57.095 22.222 14.67 0.00 39.65 1.28
98 99 8.892887 AACTGTTTGTGTTTGCAAAAATATTG 57.107 26.923 14.67 3.44 39.65 1.90
99 100 8.038492 ACTGTTTGTGTTTGCAAAAATATTGT 57.962 26.923 14.67 4.05 39.65 2.71
100 101 9.155975 ACTGTTTGTGTTTGCAAAAATATTGTA 57.844 25.926 14.67 0.00 39.65 2.41
136 137 9.625747 ATTGTGAACAATTTATGGAAAAAGGTT 57.374 25.926 2.80 0.00 43.48 3.50
137 138 9.454859 TTGTGAACAATTTATGGAAAAAGGTTT 57.545 25.926 0.00 0.00 0.00 3.27
138 139 9.103861 TGTGAACAATTTATGGAAAAAGGTTTC 57.896 29.630 0.00 0.00 42.16 2.78
139 140 9.103861 GTGAACAATTTATGGAAAAAGGTTTCA 57.896 29.630 1.97 0.00 44.29 2.69
140 141 9.672673 TGAACAATTTATGGAAAAAGGTTTCAA 57.327 25.926 1.97 0.00 44.29 2.69
172 173 8.503486 TCTAAAATGTCTTCTAATATCGACGC 57.497 34.615 0.00 0.00 0.00 5.19
173 174 8.350722 TCTAAAATGTCTTCTAATATCGACGCT 58.649 33.333 0.00 0.00 0.00 5.07
174 175 6.755461 AAATGTCTTCTAATATCGACGCTG 57.245 37.500 0.00 0.00 0.00 5.18
175 176 4.895224 TGTCTTCTAATATCGACGCTGT 57.105 40.909 0.00 0.00 0.00 4.40
176 177 5.996669 TGTCTTCTAATATCGACGCTGTA 57.003 39.130 0.00 0.00 0.00 2.74
177 178 5.745514 TGTCTTCTAATATCGACGCTGTAC 58.254 41.667 0.00 0.00 0.00 2.90
178 179 5.526479 TGTCTTCTAATATCGACGCTGTACT 59.474 40.000 0.00 0.00 0.00 2.73
179 180 6.703165 TGTCTTCTAATATCGACGCTGTACTA 59.297 38.462 0.00 0.00 0.00 1.82
180 181 7.387122 TGTCTTCTAATATCGACGCTGTACTAT 59.613 37.037 0.00 0.00 0.00 2.12
181 182 7.688989 GTCTTCTAATATCGACGCTGTACTATG 59.311 40.741 0.00 0.00 0.00 2.23
182 183 7.387122 TCTTCTAATATCGACGCTGTACTATGT 59.613 37.037 0.00 0.00 0.00 2.29
183 184 8.538409 TTCTAATATCGACGCTGTACTATGTA 57.462 34.615 0.00 0.00 0.00 2.29
184 185 7.957615 TCTAATATCGACGCTGTACTATGTAC 58.042 38.462 0.00 1.33 0.00 2.90
185 186 6.798315 AATATCGACGCTGTACTATGTACT 57.202 37.500 8.94 0.00 0.00 2.73
186 187 6.798315 ATATCGACGCTGTACTATGTACTT 57.202 37.500 8.94 0.00 0.00 2.24
187 188 7.895975 ATATCGACGCTGTACTATGTACTTA 57.104 36.000 8.94 0.00 0.00 2.24
188 189 6.609237 ATCGACGCTGTACTATGTACTTAA 57.391 37.500 8.94 0.00 0.00 1.85
189 190 6.421377 TCGACGCTGTACTATGTACTTAAA 57.579 37.500 8.94 0.00 0.00 1.52
190 191 7.019774 TCGACGCTGTACTATGTACTTAAAT 57.980 36.000 8.94 0.00 0.00 1.40
191 192 8.141835 TCGACGCTGTACTATGTACTTAAATA 57.858 34.615 8.94 0.00 0.00 1.40
192 193 8.777413 TCGACGCTGTACTATGTACTTAAATAT 58.223 33.333 8.94 0.00 0.00 1.28
193 194 9.390795 CGACGCTGTACTATGTACTTAAATATT 57.609 33.333 8.94 0.00 0.00 1.28
196 197 9.793245 CGCTGTACTATGTACTTAAATATTTGC 57.207 33.333 11.05 0.00 0.00 3.68
199 200 9.820725 TGTACTATGTACTTAAATATTTGCCGT 57.179 29.630 11.05 7.36 0.00 5.68
214 215 6.673154 ATTTGCCGTTACTTAGTTATCACC 57.327 37.500 0.00 0.00 0.00 4.02
215 216 3.772932 TGCCGTTACTTAGTTATCACCG 58.227 45.455 0.00 0.00 0.00 4.94
216 217 3.193267 TGCCGTTACTTAGTTATCACCGT 59.807 43.478 0.00 0.00 0.00 4.83
217 218 4.176271 GCCGTTACTTAGTTATCACCGTT 58.824 43.478 0.00 0.00 0.00 4.44
218 219 5.105957 TGCCGTTACTTAGTTATCACCGTTA 60.106 40.000 0.00 0.00 0.00 3.18
219 220 5.456822 GCCGTTACTTAGTTATCACCGTTAG 59.543 44.000 0.00 0.00 0.00 2.34
220 221 5.456822 CCGTTACTTAGTTATCACCGTTAGC 59.543 44.000 0.00 0.00 0.00 3.09
221 222 6.261118 CGTTACTTAGTTATCACCGTTAGCT 58.739 40.000 0.00 0.00 0.00 3.32
222 223 7.409697 CGTTACTTAGTTATCACCGTTAGCTA 58.590 38.462 0.00 0.00 0.00 3.32
223 224 8.072567 CGTTACTTAGTTATCACCGTTAGCTAT 58.927 37.037 0.00 0.00 0.00 2.97
224 225 9.392021 GTTACTTAGTTATCACCGTTAGCTATC 57.608 37.037 0.00 0.00 0.00 2.08
225 226 6.666417 ACTTAGTTATCACCGTTAGCTATCG 58.334 40.000 15.73 15.73 0.00 2.92
231 232 2.422303 CCGTTAGCTATCGGGTGGA 58.578 57.895 28.27 0.00 42.61 4.02
232 233 0.314302 CCGTTAGCTATCGGGTGGAG 59.686 60.000 28.27 8.07 42.61 3.86
233 234 1.030457 CGTTAGCTATCGGGTGGAGT 58.970 55.000 15.03 0.00 0.00 3.85
234 235 1.269102 CGTTAGCTATCGGGTGGAGTG 60.269 57.143 15.03 0.00 0.00 3.51
235 236 2.029623 GTTAGCTATCGGGTGGAGTGA 58.970 52.381 0.00 0.00 0.00 3.41
236 237 2.628657 GTTAGCTATCGGGTGGAGTGAT 59.371 50.000 0.00 0.00 0.00 3.06
237 238 2.677542 AGCTATCGGGTGGAGTGATA 57.322 50.000 0.00 0.00 0.00 2.15
238 239 2.520069 AGCTATCGGGTGGAGTGATAG 58.480 52.381 4.52 4.52 42.77 2.08
239 240 2.158445 AGCTATCGGGTGGAGTGATAGT 60.158 50.000 9.46 0.00 42.19 2.12
240 241 2.628657 GCTATCGGGTGGAGTGATAGTT 59.371 50.000 9.46 0.00 42.19 2.24
241 242 3.553096 GCTATCGGGTGGAGTGATAGTTG 60.553 52.174 9.46 0.00 42.19 3.16
242 243 0.535335 TCGGGTGGAGTGATAGTTGC 59.465 55.000 0.00 0.00 0.00 4.17
243 244 0.462047 CGGGTGGAGTGATAGTTGCC 60.462 60.000 0.00 0.00 0.00 4.52
244 245 0.618458 GGGTGGAGTGATAGTTGCCA 59.382 55.000 0.00 0.00 0.00 4.92
245 246 1.679032 GGGTGGAGTGATAGTTGCCAC 60.679 57.143 0.00 0.00 46.28 5.01
246 247 1.279271 GGTGGAGTGATAGTTGCCACT 59.721 52.381 0.00 0.00 46.24 4.00
247 248 2.350522 GTGGAGTGATAGTTGCCACTG 58.649 52.381 0.00 0.00 44.23 3.66
248 249 1.977854 TGGAGTGATAGTTGCCACTGT 59.022 47.619 0.00 0.00 43.02 3.55
249 250 2.371841 TGGAGTGATAGTTGCCACTGTT 59.628 45.455 0.00 0.00 43.02 3.16
250 251 2.744202 GGAGTGATAGTTGCCACTGTTG 59.256 50.000 0.00 0.00 43.02 3.33
251 252 2.154462 AGTGATAGTTGCCACTGTTGC 58.846 47.619 0.00 0.00 41.59 4.17
252 253 2.154462 GTGATAGTTGCCACTGTTGCT 58.846 47.619 0.00 0.00 34.06 3.91
253 254 2.160417 GTGATAGTTGCCACTGTTGCTC 59.840 50.000 0.00 0.00 34.06 4.26
254 255 2.038952 TGATAGTTGCCACTGTTGCTCT 59.961 45.455 0.00 6.44 34.06 4.09
255 256 1.882912 TAGTTGCCACTGTTGCTCTG 58.117 50.000 0.00 0.00 34.06 3.35
256 257 0.107017 AGTTGCCACTGTTGCTCTGT 60.107 50.000 5.42 0.00 0.00 3.41
257 258 1.140852 AGTTGCCACTGTTGCTCTGTA 59.859 47.619 5.42 0.00 0.00 2.74
258 259 1.264288 GTTGCCACTGTTGCTCTGTAC 59.736 52.381 5.42 0.00 0.00 2.90
259 260 0.599991 TGCCACTGTTGCTCTGTACG 60.600 55.000 5.42 0.00 0.00 3.67
260 261 0.600255 GCCACTGTTGCTCTGTACGT 60.600 55.000 0.00 0.00 0.00 3.57
261 262 1.139989 CCACTGTTGCTCTGTACGTG 58.860 55.000 0.00 0.00 0.00 4.49
262 263 1.139989 CACTGTTGCTCTGTACGTGG 58.860 55.000 0.00 0.00 0.00 4.94
263 264 0.750850 ACTGTTGCTCTGTACGTGGT 59.249 50.000 0.00 0.00 0.00 4.16
264 265 1.269621 ACTGTTGCTCTGTACGTGGTC 60.270 52.381 0.00 0.00 0.00 4.02
265 266 0.032952 TGTTGCTCTGTACGTGGTCC 59.967 55.000 0.00 0.00 0.00 4.46
266 267 0.317479 GTTGCTCTGTACGTGGTCCT 59.683 55.000 0.00 0.00 0.00 3.85
267 268 0.317160 TTGCTCTGTACGTGGTCCTG 59.683 55.000 0.00 0.00 0.00 3.86
268 269 0.538746 TGCTCTGTACGTGGTCCTGA 60.539 55.000 0.00 0.00 0.00 3.86
269 270 0.171455 GCTCTGTACGTGGTCCTGAG 59.829 60.000 0.00 3.86 0.00 3.35
270 271 1.535833 CTCTGTACGTGGTCCTGAGT 58.464 55.000 0.00 0.00 0.00 3.41
271 272 1.887198 CTCTGTACGTGGTCCTGAGTT 59.113 52.381 0.00 0.00 0.00 3.01
272 273 1.611977 TCTGTACGTGGTCCTGAGTTG 59.388 52.381 0.00 0.00 0.00 3.16
273 274 1.340248 CTGTACGTGGTCCTGAGTTGT 59.660 52.381 0.00 0.00 0.00 3.32
274 275 1.067974 TGTACGTGGTCCTGAGTTGTG 59.932 52.381 0.00 0.00 0.00 3.33
275 276 1.338973 GTACGTGGTCCTGAGTTGTGA 59.661 52.381 0.00 0.00 0.00 3.58
276 277 0.389391 ACGTGGTCCTGAGTTGTGAG 59.611 55.000 0.00 0.00 0.00 3.51
277 278 0.389391 CGTGGTCCTGAGTTGTGAGT 59.611 55.000 0.00 0.00 0.00 3.41
278 279 1.202533 CGTGGTCCTGAGTTGTGAGTT 60.203 52.381 0.00 0.00 0.00 3.01
279 280 2.484889 GTGGTCCTGAGTTGTGAGTTC 58.515 52.381 0.00 0.00 0.00 3.01
280 281 2.115427 TGGTCCTGAGTTGTGAGTTCA 58.885 47.619 0.00 0.00 0.00 3.18
281 282 2.503765 TGGTCCTGAGTTGTGAGTTCAA 59.496 45.455 0.00 0.00 0.00 2.69
282 283 3.136443 TGGTCCTGAGTTGTGAGTTCAAT 59.864 43.478 0.00 0.00 0.00 2.57
283 284 4.137543 GGTCCTGAGTTGTGAGTTCAATT 58.862 43.478 0.00 0.00 0.00 2.32
284 285 4.214332 GGTCCTGAGTTGTGAGTTCAATTC 59.786 45.833 0.00 0.00 35.56 2.17
285 286 4.816385 GTCCTGAGTTGTGAGTTCAATTCA 59.184 41.667 0.00 0.00 40.11 2.57
286 287 5.471456 GTCCTGAGTTGTGAGTTCAATTCAT 59.529 40.000 5.42 0.00 40.99 2.57
287 288 5.471116 TCCTGAGTTGTGAGTTCAATTCATG 59.529 40.000 5.42 0.00 40.99 3.07
288 289 5.471116 CCTGAGTTGTGAGTTCAATTCATGA 59.529 40.000 0.00 0.00 40.99 3.07
289 290 6.348295 CCTGAGTTGTGAGTTCAATTCATGAG 60.348 42.308 0.00 0.00 40.99 2.90
290 291 5.049198 TGAGTTGTGAGTTCAATTCATGAGC 60.049 40.000 0.00 0.00 38.47 4.26
291 292 4.083643 AGTTGTGAGTTCAATTCATGAGCG 60.084 41.667 0.00 0.00 43.43 5.03
292 293 2.743664 TGTGAGTTCAATTCATGAGCGG 59.256 45.455 0.00 0.00 43.43 5.52
293 294 1.739466 TGAGTTCAATTCATGAGCGGC 59.261 47.619 0.00 0.00 43.43 6.53
294 295 1.739466 GAGTTCAATTCATGAGCGGCA 59.261 47.619 1.45 0.00 43.43 5.69
295 296 1.470098 AGTTCAATTCATGAGCGGCAC 59.530 47.619 1.45 0.00 43.43 5.01
296 297 1.199789 GTTCAATTCATGAGCGGCACA 59.800 47.619 1.86 1.86 39.77 4.57
297 298 1.089112 TCAATTCATGAGCGGCACAG 58.911 50.000 6.24 0.00 33.04 3.66
298 299 0.806868 CAATTCATGAGCGGCACAGT 59.193 50.000 6.24 0.00 0.00 3.55
299 300 0.806868 AATTCATGAGCGGCACAGTG 59.193 50.000 6.24 0.00 0.00 3.66
300 301 0.321919 ATTCATGAGCGGCACAGTGT 60.322 50.000 6.24 0.00 0.00 3.55
301 302 1.229975 TTCATGAGCGGCACAGTGTG 61.230 55.000 19.27 19.27 36.51 3.82
302 303 1.962822 CATGAGCGGCACAGTGTGT 60.963 57.895 23.73 4.39 35.75 3.72
315 316 3.674997 ACAGTGTGTGATAATTTCCGCT 58.325 40.909 0.00 0.00 0.00 5.52
316 317 3.436704 ACAGTGTGTGATAATTTCCGCTG 59.563 43.478 0.00 0.00 0.00 5.18
317 318 3.684305 CAGTGTGTGATAATTTCCGCTGA 59.316 43.478 0.00 0.00 0.00 4.26
318 319 4.333649 CAGTGTGTGATAATTTCCGCTGAT 59.666 41.667 0.00 0.00 0.00 2.90
319 320 4.333649 AGTGTGTGATAATTTCCGCTGATG 59.666 41.667 0.00 0.00 0.00 3.07
320 321 4.094887 GTGTGTGATAATTTCCGCTGATGT 59.905 41.667 0.00 0.00 0.00 3.06
321 322 4.332543 TGTGTGATAATTTCCGCTGATGTC 59.667 41.667 0.00 0.00 0.00 3.06
322 323 4.332543 GTGTGATAATTTCCGCTGATGTCA 59.667 41.667 0.00 0.00 0.00 3.58
323 324 5.008019 GTGTGATAATTTCCGCTGATGTCAT 59.992 40.000 0.00 0.00 0.00 3.06
324 325 6.202762 GTGTGATAATTTCCGCTGATGTCATA 59.797 38.462 0.00 0.00 0.00 2.15
325 326 6.765512 TGTGATAATTTCCGCTGATGTCATAA 59.234 34.615 0.00 0.00 0.00 1.90
326 327 7.445096 TGTGATAATTTCCGCTGATGTCATAAT 59.555 33.333 0.00 0.00 0.00 1.28
327 328 8.292448 GTGATAATTTCCGCTGATGTCATAATT 58.708 33.333 0.00 0.00 0.00 1.40
328 329 8.849168 TGATAATTTCCGCTGATGTCATAATTT 58.151 29.630 0.00 0.00 0.00 1.82
331 332 8.450578 AATTTCCGCTGATGTCATAATTTAGA 57.549 30.769 0.00 0.00 0.00 2.10
332 333 8.627208 ATTTCCGCTGATGTCATAATTTAGAT 57.373 30.769 0.00 0.00 0.00 1.98
333 334 9.725019 ATTTCCGCTGATGTCATAATTTAGATA 57.275 29.630 0.00 0.00 0.00 1.98
334 335 9.725019 TTTCCGCTGATGTCATAATTTAGATAT 57.275 29.630 0.00 0.00 0.00 1.63
335 336 9.725019 TTCCGCTGATGTCATAATTTAGATATT 57.275 29.630 0.00 0.00 0.00 1.28
404 405 8.570096 AACTACTTTTTATTTTCGTGGAAAGC 57.430 30.769 0.00 0.00 32.93 3.51
405 406 6.854381 ACTACTTTTTATTTTCGTGGAAAGCG 59.146 34.615 0.00 0.00 32.93 4.68
406 407 5.823353 ACTTTTTATTTTCGTGGAAAGCGA 58.177 33.333 0.00 0.00 32.93 4.93
407 408 5.684184 ACTTTTTATTTTCGTGGAAAGCGAC 59.316 36.000 0.00 0.00 38.14 5.19
408 409 4.815040 TTTATTTTCGTGGAAAGCGACA 57.185 36.364 0.00 0.00 38.14 4.35
409 410 2.681152 ATTTTCGTGGAAAGCGACAC 57.319 45.000 0.00 0.00 38.14 3.67
410 411 1.370609 TTTTCGTGGAAAGCGACACA 58.629 45.000 0.00 0.00 38.14 3.72
411 412 1.588674 TTTCGTGGAAAGCGACACAT 58.411 45.000 0.00 0.00 38.14 3.21
412 413 1.588674 TTCGTGGAAAGCGACACATT 58.411 45.000 0.00 0.00 38.14 2.71
413 414 2.442212 TCGTGGAAAGCGACACATTA 57.558 45.000 0.00 0.00 37.45 1.90
414 415 2.967362 TCGTGGAAAGCGACACATTAT 58.033 42.857 0.00 0.00 37.45 1.28
415 416 3.331150 TCGTGGAAAGCGACACATTATT 58.669 40.909 0.00 0.00 37.45 1.40
416 417 4.496360 TCGTGGAAAGCGACACATTATTA 58.504 39.130 0.00 0.00 37.45 0.98
417 418 5.113383 TCGTGGAAAGCGACACATTATTAT 58.887 37.500 0.00 0.00 37.45 1.28
418 419 5.006261 TCGTGGAAAGCGACACATTATTATG 59.994 40.000 0.00 0.00 37.45 1.90
419 420 5.006261 CGTGGAAAGCGACACATTATTATGA 59.994 40.000 0.00 0.00 37.45 2.15
420 421 6.292865 CGTGGAAAGCGACACATTATTATGAT 60.293 38.462 0.00 0.00 37.45 2.45
421 422 7.095816 CGTGGAAAGCGACACATTATTATGATA 60.096 37.037 0.00 0.00 37.45 2.15
422 423 8.009974 GTGGAAAGCGACACATTATTATGATAC 58.990 37.037 0.00 0.00 37.54 2.24
423 424 7.713073 TGGAAAGCGACACATTATTATGATACA 59.287 33.333 0.00 0.00 35.65 2.29
424 425 8.556194 GGAAAGCGACACATTATTATGATACAA 58.444 33.333 0.00 0.00 35.65 2.41
425 426 9.370126 GAAAGCGACACATTATTATGATACAAC 57.630 33.333 0.00 0.00 35.65 3.32
426 427 8.662781 AAGCGACACATTATTATGATACAACT 57.337 30.769 0.00 0.00 35.65 3.16
427 428 8.299262 AGCGACACATTATTATGATACAACTC 57.701 34.615 0.00 0.00 35.65 3.01
428 429 7.114953 AGCGACACATTATTATGATACAACTCG 59.885 37.037 0.00 0.00 35.65 4.18
429 430 7.114388 GCGACACATTATTATGATACAACTCGA 59.886 37.037 0.00 0.00 35.65 4.04
430 431 8.417928 CGACACATTATTATGATACAACTCGAC 58.582 37.037 0.00 0.00 35.65 4.20
431 432 9.244799 GACACATTATTATGATACAACTCGACA 57.755 33.333 0.00 0.00 35.65 4.35
432 433 9.764363 ACACATTATTATGATACAACTCGACAT 57.236 29.630 0.00 0.00 35.65 3.06
454 455 1.268066 TTTTTACCGATTTGGCCCCC 58.732 50.000 0.00 0.00 43.94 5.40
474 475 6.034161 CCCCCTATACTAGTGATTTTACCG 57.966 45.833 5.39 0.00 0.00 4.02
475 476 5.776716 CCCCCTATACTAGTGATTTTACCGA 59.223 44.000 5.39 0.00 0.00 4.69
476 477 6.439692 CCCCCTATACTAGTGATTTTACCGAT 59.560 42.308 5.39 0.00 0.00 4.18
477 478 7.038516 CCCCCTATACTAGTGATTTTACCGATT 60.039 40.741 5.39 0.00 0.00 3.34
478 479 9.028284 CCCCTATACTAGTGATTTTACCGATTA 57.972 37.037 5.39 0.00 0.00 1.75
487 488 8.721019 AGTGATTTTACCGATTATTTTACCGA 57.279 30.769 0.00 0.00 0.00 4.69
488 489 9.333724 AGTGATTTTACCGATTATTTTACCGAT 57.666 29.630 0.00 0.00 0.00 4.18
489 490 9.377383 GTGATTTTACCGATTATTTTACCGATG 57.623 33.333 0.00 0.00 0.00 3.84
490 491 8.561212 TGATTTTACCGATTATTTTACCGATGG 58.439 33.333 0.00 0.00 0.00 3.51
491 492 8.680039 ATTTTACCGATTATTTTACCGATGGA 57.320 30.769 0.00 0.00 0.00 3.41
492 493 7.718272 TTTACCGATTATTTTACCGATGGAG 57.282 36.000 0.00 0.00 0.00 3.86
493 494 4.638304 ACCGATTATTTTACCGATGGAGG 58.362 43.478 0.00 0.00 37.30 4.30
494 495 4.000988 CCGATTATTTTACCGATGGAGGG 58.999 47.826 0.00 0.00 35.02 4.30
495 496 3.435671 CGATTATTTTACCGATGGAGGGC 59.564 47.826 0.00 0.00 35.02 5.19
496 497 3.935818 TTATTTTACCGATGGAGGGCA 57.064 42.857 0.00 0.00 35.02 5.36
497 498 2.818751 ATTTTACCGATGGAGGGCAA 57.181 45.000 0.00 0.00 35.02 4.52
498 499 2.588464 TTTTACCGATGGAGGGCAAA 57.412 45.000 0.00 0.00 35.02 3.68
499 500 2.818751 TTTACCGATGGAGGGCAAAT 57.181 45.000 0.00 0.00 35.02 2.32
500 501 2.341846 TTACCGATGGAGGGCAAATC 57.658 50.000 0.00 0.00 35.02 2.17
501 502 0.105964 TACCGATGGAGGGCAAATCG 59.894 55.000 0.00 0.00 42.14 3.34
502 503 3.736483 CGATGGAGGGCAAATCGG 58.264 61.111 0.00 0.00 39.54 4.18
503 504 1.153168 CGATGGAGGGCAAATCGGT 60.153 57.895 0.00 0.00 39.54 4.69
504 505 0.105964 CGATGGAGGGCAAATCGGTA 59.894 55.000 0.00 0.00 39.54 4.02
505 506 1.474320 CGATGGAGGGCAAATCGGTAA 60.474 52.381 0.00 0.00 39.54 2.85
506 507 2.650322 GATGGAGGGCAAATCGGTAAA 58.350 47.619 0.00 0.00 0.00 2.01
507 508 2.588464 TGGAGGGCAAATCGGTAAAA 57.412 45.000 0.00 0.00 0.00 1.52
508 509 2.877866 TGGAGGGCAAATCGGTAAAAA 58.122 42.857 0.00 0.00 0.00 1.94
529 530 5.715434 AAAAACGTACATGTTGGGCTTAT 57.285 34.783 2.30 0.00 31.10 1.73
530 531 5.715434 AAAACGTACATGTTGGGCTTATT 57.285 34.783 2.30 0.00 31.10 1.40
531 532 5.715434 AAACGTACATGTTGGGCTTATTT 57.285 34.783 2.30 0.00 31.10 1.40
532 533 5.715434 AACGTACATGTTGGGCTTATTTT 57.285 34.783 2.30 0.00 0.00 1.82
533 534 6.821031 AACGTACATGTTGGGCTTATTTTA 57.179 33.333 2.30 0.00 0.00 1.52
534 535 6.185852 ACGTACATGTTGGGCTTATTTTAC 57.814 37.500 2.30 0.00 0.00 2.01
535 536 5.124297 ACGTACATGTTGGGCTTATTTTACC 59.876 40.000 2.30 0.00 0.00 2.85
536 537 4.712122 ACATGTTGGGCTTATTTTACCG 57.288 40.909 0.00 0.00 0.00 4.02
537 538 4.337145 ACATGTTGGGCTTATTTTACCGA 58.663 39.130 0.00 0.00 0.00 4.69
538 539 4.953579 ACATGTTGGGCTTATTTTACCGAT 59.046 37.500 0.00 0.00 0.00 4.18
539 540 5.420739 ACATGTTGGGCTTATTTTACCGATT 59.579 36.000 0.00 0.00 0.00 3.34
540 541 5.986501 TGTTGGGCTTATTTTACCGATTT 57.013 34.783 0.00 0.00 0.00 2.17
541 542 6.347859 TGTTGGGCTTATTTTACCGATTTT 57.652 33.333 0.00 0.00 0.00 1.82
542 543 6.760291 TGTTGGGCTTATTTTACCGATTTTT 58.240 32.000 0.00 0.00 0.00 1.94
703 751 4.384056 TCTTCTTCTTCCAGTCTTTGCTG 58.616 43.478 0.00 0.00 36.31 4.41
723 771 2.578163 TAGCTCTGCACATCGGTGGC 62.578 60.000 0.00 0.88 45.38 5.01
774 822 3.541713 CTCCGAGGCAGTAGGGGC 61.542 72.222 0.00 0.00 0.00 5.80
776 824 2.123425 CCGAGGCAGTAGGGGCTA 60.123 66.667 0.00 0.00 44.62 3.93
777 825 2.203771 CCGAGGCAGTAGGGGCTAG 61.204 68.421 0.00 0.00 44.62 3.42
778 826 2.203771 CGAGGCAGTAGGGGCTAGG 61.204 68.421 0.00 0.00 44.62 3.02
820 868 2.279517 GCAGACGGCCGTCCTATG 60.280 66.667 45.66 37.82 45.59 2.23
893 981 5.888105 TGCTAAAGATCGGAGTAGTGTAAC 58.112 41.667 0.00 0.00 0.00 2.50
896 984 5.831702 AAAGATCGGAGTAGTGTAACGAT 57.168 39.130 0.00 0.00 45.86 3.73
899 987 5.819059 AGATCGGAGTAGTGTAACGATTTC 58.181 41.667 0.00 0.00 45.86 2.17
1044 1236 2.231716 TGCTCCTACTTGCCTCACTA 57.768 50.000 0.00 0.00 0.00 2.74
1049 1241 1.555075 CCTACTTGCCTCACTAGCCAA 59.445 52.381 0.00 0.00 0.00 4.52
1205 1406 3.518590 GTTATTCCACGACGTCTTCCAT 58.481 45.455 14.70 1.98 0.00 3.41
1317 1518 4.681978 GACACCGGCAGCGACCTT 62.682 66.667 0.00 0.00 0.00 3.50
1377 2075 2.768492 GGACACGCCCGTCTACGAT 61.768 63.158 3.65 0.00 43.02 3.73
1405 2103 1.008449 CCTCCTCCAGTTTCTCCCCTA 59.992 57.143 0.00 0.00 0.00 3.53
1759 2457 4.796231 CGGTCCTGTTCGGCTCCG 62.796 72.222 1.14 1.14 41.06 4.63
1896 2600 2.202932 CTGCCGATCCCGAACCAG 60.203 66.667 0.00 0.00 38.22 4.00
1899 2603 2.104331 CCGATCCCGAACCAGACG 59.896 66.667 0.00 0.00 38.22 4.18
2168 2872 3.314553 ACAACTACATGTCTTTCGACGG 58.685 45.455 0.00 0.00 43.21 4.79
2256 2960 3.354948 TTCCAGCAGCAGAACATACAT 57.645 42.857 0.00 0.00 0.00 2.29
2329 3033 3.096092 AGTAAGCTCTGAGGTCTGAAGG 58.904 50.000 10.15 0.00 0.00 3.46
2334 3038 2.093921 GCTCTGAGGTCTGAAGGTTACC 60.094 54.545 6.83 0.00 0.00 2.85
2341 3045 3.194968 AGGTCTGAAGGTTACCATGTACG 59.805 47.826 3.51 0.00 35.64 3.67
2342 3046 3.056322 GGTCTGAAGGTTACCATGTACGT 60.056 47.826 3.51 0.00 33.28 3.57
2343 3047 4.158394 GGTCTGAAGGTTACCATGTACGTA 59.842 45.833 3.51 0.00 33.28 3.57
2344 3048 5.098211 GTCTGAAGGTTACCATGTACGTAC 58.902 45.833 18.90 18.90 0.00 3.67
2345 3049 5.012239 TCTGAAGGTTACCATGTACGTACT 58.988 41.667 25.12 8.71 0.00 2.73
2346 3050 5.124457 TCTGAAGGTTACCATGTACGTACTC 59.876 44.000 25.12 11.42 0.00 2.59
2347 3051 4.158394 TGAAGGTTACCATGTACGTACTCC 59.842 45.833 25.12 14.87 0.00 3.85
2348 3052 3.026694 AGGTTACCATGTACGTACTCCC 58.973 50.000 25.12 13.73 0.00 4.30
2349 3053 3.026694 GGTTACCATGTACGTACTCCCT 58.973 50.000 25.12 9.05 0.00 4.20
2350 3054 3.067320 GGTTACCATGTACGTACTCCCTC 59.933 52.174 25.12 10.27 0.00 4.30
2351 3055 1.772836 ACCATGTACGTACTCCCTCC 58.227 55.000 25.12 0.00 0.00 4.30
2352 3056 0.666913 CCATGTACGTACTCCCTCCG 59.333 60.000 25.12 6.86 0.00 4.63
2353 3057 1.386533 CATGTACGTACTCCCTCCGT 58.613 55.000 25.12 0.00 38.53 4.69
2354 3058 1.747355 CATGTACGTACTCCCTCCGTT 59.253 52.381 25.12 0.00 36.12 4.44
2355 3059 1.453155 TGTACGTACTCCCTCCGTTC 58.547 55.000 25.12 0.00 36.12 3.95
2356 3060 0.735471 GTACGTACTCCCTCCGTTCC 59.265 60.000 18.47 0.00 36.12 3.62
2357 3061 0.327924 TACGTACTCCCTCCGTTCCA 59.672 55.000 0.00 0.00 36.12 3.53
2358 3062 0.540365 ACGTACTCCCTCCGTTCCAA 60.540 55.000 0.00 0.00 0.00 3.53
2359 3063 0.604578 CGTACTCCCTCCGTTCCAAA 59.395 55.000 0.00 0.00 0.00 3.28
2360 3064 1.206371 CGTACTCCCTCCGTTCCAAAT 59.794 52.381 0.00 0.00 0.00 2.32
2361 3065 2.354403 CGTACTCCCTCCGTTCCAAATT 60.354 50.000 0.00 0.00 0.00 1.82
2362 3066 3.119029 CGTACTCCCTCCGTTCCAAATTA 60.119 47.826 0.00 0.00 0.00 1.40
2363 3067 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
2364 3068 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
2365 3069 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
2366 3070 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
2367 3071 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
2368 3072 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
2369 3073 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
2370 3074 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
2371 3075 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
2372 3076 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
2373 3077 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
2374 3078 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
2375 3079 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
2376 3080 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
2377 3081 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
2378 3082 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
2379 3083 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
2380 3084 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
2381 3085 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
2382 3086 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
2383 3087 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
2384 3088 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
2385 3089 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
2386 3090 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
2387 3091 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
2388 3092 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
2389 3093 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
2390 3094 6.216569 GTCGCAGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 39.69 2.10
2391 3095 6.144724 GTCGCAGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 39.69 3.01
2392 3096 6.040955 TCGCAGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
2393 3097 7.230712 TCGCAGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
2394 3098 7.867909 CGCAGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
2395 3099 9.547753 GCAGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
2421 3125 6.537453 ACATCTAGATACATCCATACCTGC 57.463 41.667 4.54 0.00 0.00 4.85
2422 3126 5.126222 ACATCTAGATACATCCATACCTGCG 59.874 44.000 4.54 0.00 0.00 5.18
2423 3127 4.918588 TCTAGATACATCCATACCTGCGA 58.081 43.478 0.00 0.00 0.00 5.10
2424 3128 3.944055 AGATACATCCATACCTGCGAC 57.056 47.619 0.00 0.00 0.00 5.19
2425 3129 3.230976 AGATACATCCATACCTGCGACA 58.769 45.455 0.00 0.00 0.00 4.35
2426 3130 3.641436 AGATACATCCATACCTGCGACAA 59.359 43.478 0.00 0.00 0.00 3.18
2427 3131 2.315925 ACATCCATACCTGCGACAAG 57.684 50.000 0.00 0.00 0.00 3.16
2428 3132 1.555075 ACATCCATACCTGCGACAAGT 59.445 47.619 0.00 0.00 0.00 3.16
2429 3133 2.764010 ACATCCATACCTGCGACAAGTA 59.236 45.455 0.00 0.00 0.00 2.24
2430 3134 3.196901 ACATCCATACCTGCGACAAGTAA 59.803 43.478 0.00 0.00 0.00 2.24
2431 3135 4.141711 ACATCCATACCTGCGACAAGTAAT 60.142 41.667 0.00 0.00 0.00 1.89
2432 3136 4.481368 TCCATACCTGCGACAAGTAATT 57.519 40.909 0.00 0.00 0.00 1.40
2433 3137 4.439057 TCCATACCTGCGACAAGTAATTC 58.561 43.478 0.00 0.00 0.00 2.17
2434 3138 3.245284 CCATACCTGCGACAAGTAATTCG 59.755 47.826 0.00 0.00 38.31 3.34
2435 3139 2.736144 ACCTGCGACAAGTAATTCGA 57.264 45.000 0.00 0.00 37.43 3.71
2436 3140 3.034721 ACCTGCGACAAGTAATTCGAA 57.965 42.857 0.00 0.00 37.43 3.71
2437 3141 3.395639 ACCTGCGACAAGTAATTCGAAA 58.604 40.909 0.00 0.00 37.43 3.46
2438 3142 3.185797 ACCTGCGACAAGTAATTCGAAAC 59.814 43.478 0.00 0.00 37.43 2.78
2439 3143 3.395671 CTGCGACAAGTAATTCGAAACG 58.604 45.455 0.00 0.09 37.43 3.60
2440 3144 2.156117 TGCGACAAGTAATTCGAAACGG 59.844 45.455 0.00 0.00 37.43 4.44
2441 3145 2.409378 GCGACAAGTAATTCGAAACGGA 59.591 45.455 0.00 0.00 37.43 4.69
2442 3146 3.481467 GCGACAAGTAATTCGAAACGGAG 60.481 47.826 0.00 0.00 37.43 4.63
2443 3147 3.060363 CGACAAGTAATTCGAAACGGAGG 59.940 47.826 0.00 0.00 37.43 4.30
2444 3148 3.332034 ACAAGTAATTCGAAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
2541 3245 0.951558 GTTCATTGCCCTGTTGTCGT 59.048 50.000 0.00 0.00 0.00 4.34
2547 3251 1.668151 GCCCTGTTGTCGTGAGGAC 60.668 63.158 0.00 0.00 46.27 3.85
2568 3272 5.691754 GGACAGTTGGCATTTTCAGTAAAAG 59.308 40.000 0.00 0.00 37.97 2.27
2573 3277 7.116805 CAGTTGGCATTTTCAGTAAAAGGAATC 59.883 37.037 0.00 0.00 38.36 2.52
2618 3323 2.364632 TCGTTTACAAGCATGGGGATG 58.635 47.619 0.00 0.00 0.00 3.51
2621 3326 2.689983 GTTTACAAGCATGGGGATGAGG 59.310 50.000 0.00 0.00 0.00 3.86
2622 3327 0.183492 TACAAGCATGGGGATGAGGC 59.817 55.000 0.00 0.00 0.00 4.70
2688 3395 5.054477 GCTAATTTAGGCTGGTCGTAATGA 58.946 41.667 0.00 0.00 0.00 2.57
2689 3396 5.701290 GCTAATTTAGGCTGGTCGTAATGAT 59.299 40.000 0.00 0.00 0.00 2.45
2724 3431 2.742428 ATCATGCATGCCAACTAGGT 57.258 45.000 22.25 0.00 40.61 3.08
2746 3453 4.660789 AATTTTGATGAGGTGGCATAGC 57.339 40.909 0.00 0.00 0.00 2.97
2769 3476 7.381323 AGCATTAAATGAAGAAAAAGAGGGTG 58.619 34.615 0.00 0.00 0.00 4.61
2770 3477 7.015584 AGCATTAAATGAAGAAAAAGAGGGTGT 59.984 33.333 0.00 0.00 0.00 4.16
2829 3544 3.148412 TGCTACTTTGTGTCATGCATGT 58.852 40.909 25.43 6.98 0.00 3.21
2884 3603 5.745312 TGATACTATGCATTAGGGAGGTG 57.255 43.478 3.54 0.00 31.68 4.00
2889 3608 4.913968 ACTATGCATTAGGGAGGTGGTATT 59.086 41.667 3.54 0.00 31.68 1.89
2952 3678 2.025321 CCCATTACAACCAGCCTTAGGT 60.025 50.000 0.00 0.00 42.34 3.08
2998 3724 3.328382 AGTAACATAGCGCACTCCAAA 57.672 42.857 11.47 0.00 0.00 3.28
3079 3805 6.827641 TGTAACATAGCGATTTTCAAGACAC 58.172 36.000 0.00 0.00 0.00 3.67
3108 8229 8.040727 TGAGTCTACAAGCTAATAAATGAAGCA 58.959 33.333 0.00 0.00 38.75 3.91
3216 8337 1.843851 CCCCACTATGACCAGCCTTAA 59.156 52.381 0.00 0.00 0.00 1.85
3217 8338 2.421529 CCCCACTATGACCAGCCTTAAC 60.422 54.545 0.00 0.00 0.00 2.01
3218 8339 2.505819 CCCACTATGACCAGCCTTAACT 59.494 50.000 0.00 0.00 0.00 2.24
3219 8340 3.709653 CCCACTATGACCAGCCTTAACTA 59.290 47.826 0.00 0.00 0.00 2.24
3220 8341 4.202264 CCCACTATGACCAGCCTTAACTAG 60.202 50.000 0.00 0.00 0.00 2.57
3221 8342 4.406003 CCACTATGACCAGCCTTAACTAGT 59.594 45.833 0.00 0.00 0.00 2.57
3222 8343 5.104900 CCACTATGACCAGCCTTAACTAGTT 60.105 44.000 13.68 13.68 0.00 2.24
3223 8344 6.043411 CACTATGACCAGCCTTAACTAGTTC 58.957 44.000 12.39 0.00 0.00 3.01
3224 8345 5.720041 ACTATGACCAGCCTTAACTAGTTCA 59.280 40.000 12.39 0.00 0.00 3.18
3225 8346 5.700402 ATGACCAGCCTTAACTAGTTCAT 57.300 39.130 12.39 3.22 0.00 2.57
3226 8347 4.832248 TGACCAGCCTTAACTAGTTCATG 58.168 43.478 12.39 0.00 0.00 3.07
3227 8348 4.530553 TGACCAGCCTTAACTAGTTCATGA 59.469 41.667 12.39 0.00 0.00 3.07
3228 8349 5.091261 ACCAGCCTTAACTAGTTCATGAG 57.909 43.478 12.39 6.35 0.00 2.90
3229 8350 3.873952 CCAGCCTTAACTAGTTCATGAGC 59.126 47.826 12.39 9.35 0.00 4.26
3230 8351 4.383552 CCAGCCTTAACTAGTTCATGAGCT 60.384 45.833 16.75 16.75 0.00 4.09
3231 8352 5.163405 CCAGCCTTAACTAGTTCATGAGCTA 60.163 44.000 17.19 17.19 0.00 3.32
3232 8353 5.751028 CAGCCTTAACTAGTTCATGAGCTAC 59.249 44.000 12.39 1.51 0.00 3.58
3233 8354 5.659079 AGCCTTAACTAGTTCATGAGCTACT 59.341 40.000 12.39 9.23 0.00 2.57
3234 8355 6.155393 AGCCTTAACTAGTTCATGAGCTACTT 59.845 38.462 12.39 13.83 0.00 2.24
3235 8356 6.256757 GCCTTAACTAGTTCATGAGCTACTTG 59.743 42.308 12.39 9.93 0.00 3.16
3236 8357 7.548097 CCTTAACTAGTTCATGAGCTACTTGA 58.452 38.462 12.39 8.63 0.00 3.02
3237 8358 8.200792 CCTTAACTAGTTCATGAGCTACTTGAT 58.799 37.037 12.39 5.56 33.71 2.57
3238 8359 9.593134 CTTAACTAGTTCATGAGCTACTTGATT 57.407 33.333 12.39 7.53 33.71 2.57
3240 8361 8.934507 AACTAGTTCATGAGCTACTTGATTAC 57.065 34.615 14.61 0.00 33.71 1.89
3241 8362 8.299990 ACTAGTTCATGAGCTACTTGATTACT 57.700 34.615 14.61 4.58 33.71 2.24
3242 8363 8.410141 ACTAGTTCATGAGCTACTTGATTACTC 58.590 37.037 14.61 0.00 33.71 2.59
3243 8364 7.416964 AGTTCATGAGCTACTTGATTACTCT 57.583 36.000 10.73 0.00 33.71 3.24
3244 8365 7.488322 AGTTCATGAGCTACTTGATTACTCTC 58.512 38.462 10.73 0.00 33.71 3.20
3245 8366 6.398234 TCATGAGCTACTTGATTACTCTCC 57.602 41.667 0.00 0.00 0.00 3.71
3246 8367 5.303078 TCATGAGCTACTTGATTACTCTCCC 59.697 44.000 0.00 0.00 0.00 4.30
3247 8368 4.873010 TGAGCTACTTGATTACTCTCCCT 58.127 43.478 0.00 0.00 0.00 4.20
3248 8369 6.014771 TGAGCTACTTGATTACTCTCCCTA 57.985 41.667 0.00 0.00 0.00 3.53
3249 8370 6.615617 TGAGCTACTTGATTACTCTCCCTAT 58.384 40.000 0.00 0.00 0.00 2.57
3250 8371 7.069986 TGAGCTACTTGATTACTCTCCCTATT 58.930 38.462 0.00 0.00 0.00 1.73
3251 8372 8.225416 TGAGCTACTTGATTACTCTCCCTATTA 58.775 37.037 0.00 0.00 0.00 0.98
3252 8373 8.411991 AGCTACTTGATTACTCTCCCTATTAC 57.588 38.462 0.00 0.00 0.00 1.89
3253 8374 8.005388 AGCTACTTGATTACTCTCCCTATTACA 58.995 37.037 0.00 0.00 0.00 2.41
3254 8375 8.301002 GCTACTTGATTACTCTCCCTATTACAG 58.699 40.741 0.00 0.00 0.00 2.74
3255 8376 9.357161 CTACTTGATTACTCTCCCTATTACAGT 57.643 37.037 0.00 0.00 0.00 3.55
3256 8377 8.012957 ACTTGATTACTCTCCCTATTACAGTG 57.987 38.462 0.00 0.00 0.00 3.66
3257 8378 7.839705 ACTTGATTACTCTCCCTATTACAGTGA 59.160 37.037 0.00 0.00 0.00 3.41
3258 8379 8.783660 TTGATTACTCTCCCTATTACAGTGAT 57.216 34.615 0.00 0.00 0.00 3.06
3259 8380 8.410673 TGATTACTCTCCCTATTACAGTGATC 57.589 38.462 0.00 0.00 33.07 2.92
3260 8381 8.004801 TGATTACTCTCCCTATTACAGTGATCA 58.995 37.037 0.00 0.00 37.61 2.92
3261 8382 7.825331 TTACTCTCCCTATTACAGTGATCAG 57.175 40.000 0.00 0.00 0.00 2.90
3262 8383 6.019656 ACTCTCCCTATTACAGTGATCAGA 57.980 41.667 0.00 0.00 0.00 3.27
3263 8384 6.068010 ACTCTCCCTATTACAGTGATCAGAG 58.932 44.000 0.00 0.00 0.00 3.35
3264 8385 6.126332 ACTCTCCCTATTACAGTGATCAGAGA 60.126 42.308 0.00 0.00 0.00 3.10
3265 8386 6.857848 TCTCCCTATTACAGTGATCAGAGAT 58.142 40.000 0.00 0.00 0.00 2.75
3266 8387 6.718912 TCTCCCTATTACAGTGATCAGAGATG 59.281 42.308 0.00 0.00 0.00 2.90
3267 8388 6.614657 TCCCTATTACAGTGATCAGAGATGA 58.385 40.000 0.00 0.00 0.00 2.92
3268 8389 6.491745 TCCCTATTACAGTGATCAGAGATGAC 59.508 42.308 0.00 0.00 0.00 3.06
3269 8390 6.266330 CCCTATTACAGTGATCAGAGATGACA 59.734 42.308 0.00 0.00 0.00 3.58
3270 8391 7.039152 CCCTATTACAGTGATCAGAGATGACAT 60.039 40.741 0.00 0.00 0.00 3.06
3271 8392 7.813627 CCTATTACAGTGATCAGAGATGACATG 59.186 40.741 0.00 0.00 0.00 3.21
3272 8393 3.794717 ACAGTGATCAGAGATGACATGC 58.205 45.455 0.00 0.00 0.00 4.06
3273 8394 2.795470 CAGTGATCAGAGATGACATGCG 59.205 50.000 0.00 0.00 0.00 4.73
3274 8395 2.429971 AGTGATCAGAGATGACATGCGT 59.570 45.455 0.00 0.00 0.00 5.24
3275 8396 3.633986 AGTGATCAGAGATGACATGCGTA 59.366 43.478 0.00 0.00 0.00 4.42
3276 8397 4.098501 AGTGATCAGAGATGACATGCGTAA 59.901 41.667 0.00 0.00 0.00 3.18
3277 8398 4.805719 GTGATCAGAGATGACATGCGTAAA 59.194 41.667 0.00 0.00 0.00 2.01
3278 8399 4.805719 TGATCAGAGATGACATGCGTAAAC 59.194 41.667 0.00 0.00 0.00 2.01
3279 8400 4.456280 TCAGAGATGACATGCGTAAACT 57.544 40.909 0.00 0.00 0.00 2.66
3280 8401 4.820897 TCAGAGATGACATGCGTAAACTT 58.179 39.130 0.00 0.00 0.00 2.66
3281 8402 5.237815 TCAGAGATGACATGCGTAAACTTT 58.762 37.500 0.00 0.00 0.00 2.66
3282 8403 5.120674 TCAGAGATGACATGCGTAAACTTTG 59.879 40.000 0.00 0.00 0.00 2.77
3283 8404 5.120674 CAGAGATGACATGCGTAAACTTTGA 59.879 40.000 0.00 0.00 0.00 2.69
3284 8405 5.700832 AGAGATGACATGCGTAAACTTTGAA 59.299 36.000 0.00 0.00 0.00 2.69
3285 8406 5.931532 AGATGACATGCGTAAACTTTGAAG 58.068 37.500 0.00 0.00 0.00 3.02
3286 8407 5.700832 AGATGACATGCGTAAACTTTGAAGA 59.299 36.000 0.00 0.00 0.00 2.87
3287 8408 5.090652 TGACATGCGTAAACTTTGAAGAC 57.909 39.130 0.00 0.00 0.00 3.01
3288 8409 4.572795 TGACATGCGTAAACTTTGAAGACA 59.427 37.500 0.00 0.00 0.00 3.41
3289 8410 5.238432 TGACATGCGTAAACTTTGAAGACAT 59.762 36.000 0.00 0.00 0.00 3.06
3290 8411 5.451908 ACATGCGTAAACTTTGAAGACATG 58.548 37.500 0.00 0.00 38.59 3.21
3291 8412 5.238432 ACATGCGTAAACTTTGAAGACATGA 59.762 36.000 0.00 0.00 36.69 3.07
3292 8413 5.743026 TGCGTAAACTTTGAAGACATGAA 57.257 34.783 0.00 0.00 0.00 2.57
3293 8414 6.312399 TGCGTAAACTTTGAAGACATGAAT 57.688 33.333 0.00 0.00 0.00 2.57
3294 8415 6.734137 TGCGTAAACTTTGAAGACATGAATT 58.266 32.000 0.00 0.00 0.00 2.17
3295 8416 7.866729 TGCGTAAACTTTGAAGACATGAATTA 58.133 30.769 0.00 0.00 0.00 1.40
3296 8417 8.015087 TGCGTAAACTTTGAAGACATGAATTAG 58.985 33.333 0.00 0.00 0.00 1.73
3297 8418 8.015658 GCGTAAACTTTGAAGACATGAATTAGT 58.984 33.333 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 9.387123 GCAAACACAAACAGTTTTAAAATTTCA 57.613 25.926 3.52 0.00 37.10 2.69
63 64 9.387123 TGCAAACACAAACAGTTTTAAAATTTC 57.613 25.926 3.52 0.00 37.10 2.17
64 65 9.736023 TTGCAAACACAAACAGTTTTAAAATTT 57.264 22.222 3.52 0.00 37.10 1.82
65 66 9.736023 TTTGCAAACACAAACAGTTTTAAAATT 57.264 22.222 8.05 0.00 37.10 1.82
66 67 9.736023 TTTTGCAAACACAAACAGTTTTAAAAT 57.264 22.222 12.39 0.00 39.18 1.82
67 68 9.567848 TTTTTGCAAACACAAACAGTTTTAAAA 57.432 22.222 12.39 0.00 39.18 1.52
68 69 9.736023 ATTTTTGCAAACACAAACAGTTTTAAA 57.264 22.222 12.39 0.00 39.18 1.52
71 72 9.905171 AATATTTTTGCAAACACAAACAGTTTT 57.095 22.222 12.39 0.00 39.18 2.43
72 73 9.339492 CAATATTTTTGCAAACACAAACAGTTT 57.661 25.926 12.39 0.00 39.18 2.66
73 74 8.510505 ACAATATTTTTGCAAACACAAACAGTT 58.489 25.926 12.39 0.00 39.18 3.16
74 75 8.038492 ACAATATTTTTGCAAACACAAACAGT 57.962 26.923 12.39 1.70 39.18 3.55
111 112 9.454859 AAACCTTTTTCCATAAATTGTTCACAA 57.545 25.926 0.00 0.00 40.51 3.33
112 113 9.103861 GAAACCTTTTTCCATAAATTGTTCACA 57.896 29.630 0.00 0.00 35.92 3.58
113 114 9.103861 TGAAACCTTTTTCCATAAATTGTTCAC 57.896 29.630 0.00 0.00 40.55 3.18
114 115 9.672673 TTGAAACCTTTTTCCATAAATTGTTCA 57.327 25.926 0.00 0.00 40.55 3.18
146 147 8.965172 GCGTCGATATTAGAAGACATTTTAGAA 58.035 33.333 0.00 0.00 33.56 2.10
147 148 8.350722 AGCGTCGATATTAGAAGACATTTTAGA 58.649 33.333 0.00 0.00 33.56 2.10
148 149 8.420945 CAGCGTCGATATTAGAAGACATTTTAG 58.579 37.037 0.00 0.00 33.56 1.85
149 150 7.919091 ACAGCGTCGATATTAGAAGACATTTTA 59.081 33.333 0.00 0.00 33.56 1.52
150 151 6.757010 ACAGCGTCGATATTAGAAGACATTTT 59.243 34.615 0.00 0.00 33.56 1.82
151 152 6.273825 ACAGCGTCGATATTAGAAGACATTT 58.726 36.000 0.00 0.00 33.56 2.32
152 153 5.833082 ACAGCGTCGATATTAGAAGACATT 58.167 37.500 0.00 0.00 33.56 2.71
153 154 5.440234 ACAGCGTCGATATTAGAAGACAT 57.560 39.130 0.00 0.00 33.56 3.06
154 155 4.895224 ACAGCGTCGATATTAGAAGACA 57.105 40.909 0.00 0.00 33.56 3.41
155 156 5.988092 AGTACAGCGTCGATATTAGAAGAC 58.012 41.667 0.00 0.00 0.00 3.01
156 157 7.387122 ACATAGTACAGCGTCGATATTAGAAGA 59.613 37.037 0.00 0.00 0.00 2.87
157 158 7.519843 ACATAGTACAGCGTCGATATTAGAAG 58.480 38.462 0.00 0.00 0.00 2.85
158 159 7.430992 ACATAGTACAGCGTCGATATTAGAA 57.569 36.000 0.00 0.00 0.00 2.10
159 160 7.816513 AGTACATAGTACAGCGTCGATATTAGA 59.183 37.037 9.68 0.00 0.00 2.10
160 161 7.961855 AGTACATAGTACAGCGTCGATATTAG 58.038 38.462 9.68 0.00 0.00 1.73
161 162 7.895975 AGTACATAGTACAGCGTCGATATTA 57.104 36.000 9.68 0.00 0.00 0.98
162 163 6.798315 AGTACATAGTACAGCGTCGATATT 57.202 37.500 9.68 0.00 0.00 1.28
163 164 6.798315 AAGTACATAGTACAGCGTCGATAT 57.202 37.500 9.68 0.00 0.00 1.63
164 165 7.713764 TTAAGTACATAGTACAGCGTCGATA 57.286 36.000 9.68 0.00 0.00 2.92
165 166 6.609237 TTAAGTACATAGTACAGCGTCGAT 57.391 37.500 9.68 0.00 0.00 3.59
166 167 6.421377 TTTAAGTACATAGTACAGCGTCGA 57.579 37.500 9.68 0.00 0.00 4.20
167 168 8.945758 ATATTTAAGTACATAGTACAGCGTCG 57.054 34.615 9.68 0.00 0.00 5.12
170 171 9.793245 GCAAATATTTAAGTACATAGTACAGCG 57.207 33.333 9.68 0.00 0.00 5.18
173 174 9.820725 ACGGCAAATATTTAAGTACATAGTACA 57.179 29.630 9.68 0.00 0.00 2.90
188 189 8.833493 GGTGATAACTAAGTAACGGCAAATATT 58.167 33.333 0.00 0.00 0.00 1.28
189 190 7.170320 CGGTGATAACTAAGTAACGGCAAATAT 59.830 37.037 0.00 0.00 0.00 1.28
190 191 6.476380 CGGTGATAACTAAGTAACGGCAAATA 59.524 38.462 0.00 0.00 0.00 1.40
191 192 5.292589 CGGTGATAACTAAGTAACGGCAAAT 59.707 40.000 0.00 0.00 0.00 2.32
192 193 4.626604 CGGTGATAACTAAGTAACGGCAAA 59.373 41.667 0.00 0.00 0.00 3.68
193 194 4.175516 CGGTGATAACTAAGTAACGGCAA 58.824 43.478 0.00 0.00 0.00 4.52
194 195 3.193267 ACGGTGATAACTAAGTAACGGCA 59.807 43.478 0.00 0.00 0.00 5.69
195 196 3.774066 ACGGTGATAACTAAGTAACGGC 58.226 45.455 0.00 0.00 0.00 5.68
196 197 5.456822 GCTAACGGTGATAACTAAGTAACGG 59.543 44.000 0.00 0.00 0.00 4.44
197 198 6.261118 AGCTAACGGTGATAACTAAGTAACG 58.739 40.000 0.00 0.00 0.00 3.18
198 199 9.392021 GATAGCTAACGGTGATAACTAAGTAAC 57.608 37.037 0.00 0.00 0.00 2.50
199 200 8.285394 CGATAGCTAACGGTGATAACTAAGTAA 58.715 37.037 15.02 0.00 0.00 2.24
200 201 7.095060 CCGATAGCTAACGGTGATAACTAAGTA 60.095 40.741 28.77 0.00 43.53 2.24
201 202 6.293845 CCGATAGCTAACGGTGATAACTAAGT 60.294 42.308 28.77 0.00 43.53 2.24
202 203 6.084925 CCGATAGCTAACGGTGATAACTAAG 58.915 44.000 28.77 4.28 43.53 2.18
203 204 5.048504 CCCGATAGCTAACGGTGATAACTAA 60.049 44.000 32.49 0.00 46.53 2.24
204 205 4.456911 CCCGATAGCTAACGGTGATAACTA 59.543 45.833 32.49 0.00 46.53 2.24
205 206 3.255149 CCCGATAGCTAACGGTGATAACT 59.745 47.826 32.49 0.00 46.53 2.24
206 207 3.005155 ACCCGATAGCTAACGGTGATAAC 59.995 47.826 32.49 0.00 46.53 1.89
207 208 3.005050 CACCCGATAGCTAACGGTGATAA 59.995 47.826 32.49 0.00 46.53 1.75
208 209 2.555325 CACCCGATAGCTAACGGTGATA 59.445 50.000 32.49 0.00 46.53 2.15
209 210 1.340248 CACCCGATAGCTAACGGTGAT 59.660 52.381 32.49 19.33 46.53 3.06
210 211 0.742505 CACCCGATAGCTAACGGTGA 59.257 55.000 32.49 0.00 46.53 4.02
211 212 0.249322 CCACCCGATAGCTAACGGTG 60.249 60.000 32.49 28.05 46.53 4.94
212 213 0.396139 TCCACCCGATAGCTAACGGT 60.396 55.000 32.49 21.28 46.53 4.83
214 215 1.030457 ACTCCACCCGATAGCTAACG 58.970 55.000 15.78 15.78 0.00 3.18
215 216 2.029623 TCACTCCACCCGATAGCTAAC 58.970 52.381 0.00 0.00 0.00 2.34
216 217 2.447408 TCACTCCACCCGATAGCTAA 57.553 50.000 0.00 0.00 0.00 3.09
217 218 2.677542 ATCACTCCACCCGATAGCTA 57.322 50.000 0.00 0.00 0.00 3.32
218 219 2.158445 ACTATCACTCCACCCGATAGCT 60.158 50.000 0.00 0.00 41.46 3.32
219 220 2.240279 ACTATCACTCCACCCGATAGC 58.760 52.381 0.00 0.00 41.46 2.97
220 221 3.553096 GCAACTATCACTCCACCCGATAG 60.553 52.174 0.00 0.00 42.77 2.08
221 222 2.364324 GCAACTATCACTCCACCCGATA 59.636 50.000 0.00 0.00 0.00 2.92
222 223 1.139058 GCAACTATCACTCCACCCGAT 59.861 52.381 0.00 0.00 0.00 4.18
223 224 0.535335 GCAACTATCACTCCACCCGA 59.465 55.000 0.00 0.00 0.00 5.14
224 225 0.462047 GGCAACTATCACTCCACCCG 60.462 60.000 0.00 0.00 0.00 5.28
225 226 0.618458 TGGCAACTATCACTCCACCC 59.382 55.000 0.00 0.00 37.61 4.61
226 227 1.279271 AGTGGCAACTATCACTCCACC 59.721 52.381 0.00 0.00 46.14 4.61
227 228 2.289694 ACAGTGGCAACTATCACTCCAC 60.290 50.000 0.00 1.75 45.53 4.02
228 229 1.977854 ACAGTGGCAACTATCACTCCA 59.022 47.619 0.00 0.00 41.71 3.86
229 230 2.744202 CAACAGTGGCAACTATCACTCC 59.256 50.000 0.00 0.00 41.71 3.85
230 231 2.160417 GCAACAGTGGCAACTATCACTC 59.840 50.000 0.00 0.00 41.71 3.51
231 232 2.154462 GCAACAGTGGCAACTATCACT 58.846 47.619 0.00 0.00 44.12 3.41
232 233 2.154462 AGCAACAGTGGCAACTATCAC 58.846 47.619 1.78 0.00 33.79 3.06
233 234 2.038952 AGAGCAACAGTGGCAACTATCA 59.961 45.455 1.78 0.00 33.79 2.15
234 235 2.417933 CAGAGCAACAGTGGCAACTATC 59.582 50.000 1.78 0.00 33.79 2.08
235 236 2.224621 ACAGAGCAACAGTGGCAACTAT 60.225 45.455 1.78 0.00 33.79 2.12
236 237 1.140852 ACAGAGCAACAGTGGCAACTA 59.859 47.619 1.78 0.00 33.79 2.24
237 238 0.107017 ACAGAGCAACAGTGGCAACT 60.107 50.000 1.78 0.00 36.98 3.16
238 239 1.264288 GTACAGAGCAACAGTGGCAAC 59.736 52.381 1.78 0.00 0.00 4.17
239 240 1.593196 GTACAGAGCAACAGTGGCAA 58.407 50.000 1.78 0.00 0.00 4.52
240 241 0.599991 CGTACAGAGCAACAGTGGCA 60.600 55.000 1.78 0.00 0.00 4.92
241 242 0.600255 ACGTACAGAGCAACAGTGGC 60.600 55.000 0.00 0.00 0.00 5.01
242 243 1.139989 CACGTACAGAGCAACAGTGG 58.860 55.000 0.00 0.00 0.00 4.00
243 244 1.139989 CCACGTACAGAGCAACAGTG 58.860 55.000 0.00 0.00 0.00 3.66
244 245 0.750850 ACCACGTACAGAGCAACAGT 59.249 50.000 0.00 0.00 0.00 3.55
245 246 1.419374 GACCACGTACAGAGCAACAG 58.581 55.000 0.00 0.00 0.00 3.16
246 247 0.032952 GGACCACGTACAGAGCAACA 59.967 55.000 0.00 0.00 0.00 3.33
247 248 0.317479 AGGACCACGTACAGAGCAAC 59.683 55.000 0.00 0.00 0.00 4.17
248 249 0.317160 CAGGACCACGTACAGAGCAA 59.683 55.000 0.00 0.00 0.00 3.91
249 250 0.538746 TCAGGACCACGTACAGAGCA 60.539 55.000 0.00 0.00 0.00 4.26
250 251 0.171455 CTCAGGACCACGTACAGAGC 59.829 60.000 0.00 0.00 0.00 4.09
251 252 1.535833 ACTCAGGACCACGTACAGAG 58.464 55.000 0.00 0.00 0.00 3.35
252 253 1.611977 CAACTCAGGACCACGTACAGA 59.388 52.381 0.00 0.00 0.00 3.41
253 254 1.340248 ACAACTCAGGACCACGTACAG 59.660 52.381 0.00 0.00 0.00 2.74
254 255 1.067974 CACAACTCAGGACCACGTACA 59.932 52.381 0.00 0.00 0.00 2.90
255 256 1.338973 TCACAACTCAGGACCACGTAC 59.661 52.381 0.00 0.00 0.00 3.67
256 257 1.611977 CTCACAACTCAGGACCACGTA 59.388 52.381 0.00 0.00 0.00 3.57
257 258 0.389391 CTCACAACTCAGGACCACGT 59.611 55.000 0.00 0.00 0.00 4.49
258 259 0.389391 ACTCACAACTCAGGACCACG 59.611 55.000 0.00 0.00 0.00 4.94
259 260 2.158957 TGAACTCACAACTCAGGACCAC 60.159 50.000 0.00 0.00 0.00 4.16
260 261 2.115427 TGAACTCACAACTCAGGACCA 58.885 47.619 0.00 0.00 0.00 4.02
261 262 2.910688 TGAACTCACAACTCAGGACC 57.089 50.000 0.00 0.00 0.00 4.46
262 263 4.816385 TGAATTGAACTCACAACTCAGGAC 59.184 41.667 0.00 0.00 32.46 3.85
263 264 5.034852 TGAATTGAACTCACAACTCAGGA 57.965 39.130 0.00 0.00 32.46 3.86
264 265 5.471116 TCATGAATTGAACTCACAACTCAGG 59.529 40.000 0.00 0.00 38.89 3.86
265 266 6.549912 TCATGAATTGAACTCACAACTCAG 57.450 37.500 0.00 0.00 38.89 3.35
266 267 5.049198 GCTCATGAATTGAACTCACAACTCA 60.049 40.000 0.00 0.00 39.60 3.41
267 268 5.388944 GCTCATGAATTGAACTCACAACTC 58.611 41.667 0.00 0.00 32.78 3.01
268 269 4.083643 CGCTCATGAATTGAACTCACAACT 60.084 41.667 0.00 0.00 32.78 3.16
269 270 4.153986 CGCTCATGAATTGAACTCACAAC 58.846 43.478 0.00 0.00 32.78 3.32
270 271 3.189080 CCGCTCATGAATTGAACTCACAA 59.811 43.478 0.00 0.00 32.78 3.33
271 272 2.743664 CCGCTCATGAATTGAACTCACA 59.256 45.455 0.00 0.00 32.78 3.58
272 273 2.476854 GCCGCTCATGAATTGAACTCAC 60.477 50.000 0.00 0.00 32.78 3.51
273 274 1.739466 GCCGCTCATGAATTGAACTCA 59.261 47.619 0.00 0.00 32.78 3.41
274 275 1.739466 TGCCGCTCATGAATTGAACTC 59.261 47.619 0.00 0.00 32.78 3.01
275 276 1.470098 GTGCCGCTCATGAATTGAACT 59.530 47.619 0.00 0.00 32.78 3.01
276 277 1.199789 TGTGCCGCTCATGAATTGAAC 59.800 47.619 0.00 0.00 32.78 3.18
277 278 1.469703 CTGTGCCGCTCATGAATTGAA 59.530 47.619 0.00 0.00 32.78 2.69
278 279 1.089112 CTGTGCCGCTCATGAATTGA 58.911 50.000 0.00 0.00 0.00 2.57
279 280 0.806868 ACTGTGCCGCTCATGAATTG 59.193 50.000 0.00 0.00 0.00 2.32
280 281 0.806868 CACTGTGCCGCTCATGAATT 59.193 50.000 0.00 0.00 0.00 2.17
281 282 0.321919 ACACTGTGCCGCTCATGAAT 60.322 50.000 7.90 0.00 0.00 2.57
282 283 1.071299 ACACTGTGCCGCTCATGAA 59.929 52.632 7.90 0.00 0.00 2.57
283 284 1.668793 CACACTGTGCCGCTCATGA 60.669 57.895 7.90 0.00 0.00 3.07
284 285 1.962822 ACACACTGTGCCGCTCATG 60.963 57.895 9.20 0.00 36.98 3.07
285 286 1.962822 CACACACTGTGCCGCTCAT 60.963 57.895 9.20 0.00 41.89 2.90
286 287 2.588596 CACACACTGTGCCGCTCA 60.589 61.111 9.20 0.00 41.89 4.26
294 295 3.436704 CAGCGGAAATTATCACACACTGT 59.563 43.478 0.00 0.00 0.00 3.55
295 296 3.684305 TCAGCGGAAATTATCACACACTG 59.316 43.478 0.00 0.00 0.00 3.66
296 297 3.937814 TCAGCGGAAATTATCACACACT 58.062 40.909 0.00 0.00 0.00 3.55
297 298 4.094887 ACATCAGCGGAAATTATCACACAC 59.905 41.667 0.00 0.00 0.00 3.82
298 299 4.260985 ACATCAGCGGAAATTATCACACA 58.739 39.130 0.00 0.00 0.00 3.72
299 300 4.332543 TGACATCAGCGGAAATTATCACAC 59.667 41.667 0.00 0.00 0.00 3.82
300 301 4.512484 TGACATCAGCGGAAATTATCACA 58.488 39.130 0.00 0.00 0.00 3.58
301 302 5.679734 ATGACATCAGCGGAAATTATCAC 57.320 39.130 0.00 0.00 0.00 3.06
302 303 7.984422 ATTATGACATCAGCGGAAATTATCA 57.016 32.000 0.00 0.00 0.00 2.15
305 306 9.554395 TCTAAATTATGACATCAGCGGAAATTA 57.446 29.630 0.00 0.00 0.00 1.40
306 307 8.450578 TCTAAATTATGACATCAGCGGAAATT 57.549 30.769 0.00 0.00 0.00 1.82
307 308 8.627208 ATCTAAATTATGACATCAGCGGAAAT 57.373 30.769 0.00 0.00 0.00 2.17
308 309 9.725019 ATATCTAAATTATGACATCAGCGGAAA 57.275 29.630 0.00 0.00 0.00 3.13
309 310 9.725019 AATATCTAAATTATGACATCAGCGGAA 57.275 29.630 0.00 0.00 0.00 4.30
378 379 9.667989 GCTTTCCACGAAAATAAAAAGTAGTTA 57.332 29.630 0.00 0.00 30.84 2.24
379 380 7.377662 CGCTTTCCACGAAAATAAAAAGTAGTT 59.622 33.333 0.00 0.00 30.84 2.24
380 381 6.854381 CGCTTTCCACGAAAATAAAAAGTAGT 59.146 34.615 0.00 0.00 30.84 2.73
381 382 7.059147 GTCGCTTTCCACGAAAATAAAAAGTAG 59.941 37.037 0.00 0.00 41.93 2.57
382 383 6.852345 GTCGCTTTCCACGAAAATAAAAAGTA 59.148 34.615 0.00 0.00 41.93 2.24
383 384 5.684184 GTCGCTTTCCACGAAAATAAAAAGT 59.316 36.000 0.00 0.00 41.93 2.66
384 385 5.683743 TGTCGCTTTCCACGAAAATAAAAAG 59.316 36.000 0.00 0.00 41.93 2.27
385 386 5.456173 GTGTCGCTTTCCACGAAAATAAAAA 59.544 36.000 0.00 0.00 41.93 1.94
386 387 4.971220 GTGTCGCTTTCCACGAAAATAAAA 59.029 37.500 0.00 0.00 41.93 1.52
387 388 4.035324 TGTGTCGCTTTCCACGAAAATAAA 59.965 37.500 0.00 0.00 41.93 1.40
388 389 3.560481 TGTGTCGCTTTCCACGAAAATAA 59.440 39.130 0.00 0.00 41.93 1.40
389 390 3.132160 TGTGTCGCTTTCCACGAAAATA 58.868 40.909 0.00 0.00 41.93 1.40
390 391 1.944024 TGTGTCGCTTTCCACGAAAAT 59.056 42.857 0.00 0.00 41.93 1.82
391 392 1.370609 TGTGTCGCTTTCCACGAAAA 58.629 45.000 0.00 0.00 41.93 2.29
392 393 1.588674 ATGTGTCGCTTTCCACGAAA 58.411 45.000 0.00 0.00 41.93 3.46
393 394 1.588674 AATGTGTCGCTTTCCACGAA 58.411 45.000 0.00 0.00 41.93 3.85
394 395 2.442212 TAATGTGTCGCTTTCCACGA 57.558 45.000 0.00 0.00 37.17 4.35
395 396 3.740044 AATAATGTGTCGCTTTCCACG 57.260 42.857 0.00 0.00 34.28 4.94
396 397 6.358118 TCATAATAATGTGTCGCTTTCCAC 57.642 37.500 0.00 0.00 34.50 4.02
397 398 7.713073 TGTATCATAATAATGTGTCGCTTTCCA 59.287 33.333 0.00 0.00 34.50 3.53
398 399 8.083462 TGTATCATAATAATGTGTCGCTTTCC 57.917 34.615 0.00 0.00 34.50 3.13
399 400 9.370126 GTTGTATCATAATAATGTGTCGCTTTC 57.630 33.333 0.00 0.00 34.50 2.62
400 401 9.109393 AGTTGTATCATAATAATGTGTCGCTTT 57.891 29.630 0.00 0.00 34.50 3.51
401 402 8.662781 AGTTGTATCATAATAATGTGTCGCTT 57.337 30.769 0.00 0.00 34.50 4.68
402 403 7.114953 CGAGTTGTATCATAATAATGTGTCGCT 59.885 37.037 0.00 0.00 34.50 4.93
403 404 7.114388 TCGAGTTGTATCATAATAATGTGTCGC 59.886 37.037 0.00 0.00 34.50 5.19
404 405 8.417928 GTCGAGTTGTATCATAATAATGTGTCG 58.582 37.037 0.00 0.00 34.50 4.35
405 406 9.244799 TGTCGAGTTGTATCATAATAATGTGTC 57.755 33.333 0.00 0.00 34.50 3.67
406 407 9.764363 ATGTCGAGTTGTATCATAATAATGTGT 57.236 29.630 0.00 0.00 34.50 3.72
435 436 1.268066 GGGGGCCAAATCGGTAAAAA 58.732 50.000 4.39 0.00 36.97 1.94
436 437 2.979058 GGGGGCCAAATCGGTAAAA 58.021 52.632 4.39 0.00 36.97 1.52
437 438 4.768404 GGGGGCCAAATCGGTAAA 57.232 55.556 4.39 0.00 36.97 2.01
451 452 5.776716 TCGGTAAAATCACTAGTATAGGGGG 59.223 44.000 0.00 0.00 44.08 5.40
452 453 6.906157 TCGGTAAAATCACTAGTATAGGGG 57.094 41.667 0.00 0.00 44.08 4.79
461 462 9.814899 TCGGTAAAATAATCGGTAAAATCACTA 57.185 29.630 0.00 0.00 0.00 2.74
462 463 8.721019 TCGGTAAAATAATCGGTAAAATCACT 57.279 30.769 0.00 0.00 0.00 3.41
463 464 9.377383 CATCGGTAAAATAATCGGTAAAATCAC 57.623 33.333 0.00 0.00 0.00 3.06
464 465 8.561212 CCATCGGTAAAATAATCGGTAAAATCA 58.439 33.333 0.00 0.00 0.00 2.57
465 466 8.776470 TCCATCGGTAAAATAATCGGTAAAATC 58.224 33.333 0.00 0.00 0.00 2.17
466 467 8.680039 TCCATCGGTAAAATAATCGGTAAAAT 57.320 30.769 0.00 0.00 0.00 1.82
467 468 7.227116 CCTCCATCGGTAAAATAATCGGTAAAA 59.773 37.037 0.00 0.00 0.00 1.52
468 469 6.707161 CCTCCATCGGTAAAATAATCGGTAAA 59.293 38.462 0.00 0.00 0.00 2.01
469 470 6.225318 CCTCCATCGGTAAAATAATCGGTAA 58.775 40.000 0.00 0.00 0.00 2.85
470 471 5.279607 CCCTCCATCGGTAAAATAATCGGTA 60.280 44.000 0.00 0.00 0.00 4.02
471 472 4.504340 CCCTCCATCGGTAAAATAATCGGT 60.504 45.833 0.00 0.00 0.00 4.69
472 473 4.000988 CCCTCCATCGGTAAAATAATCGG 58.999 47.826 0.00 0.00 0.00 4.18
473 474 3.435671 GCCCTCCATCGGTAAAATAATCG 59.564 47.826 0.00 0.00 0.00 3.34
474 475 4.394729 TGCCCTCCATCGGTAAAATAATC 58.605 43.478 0.00 0.00 0.00 1.75
475 476 4.447138 TGCCCTCCATCGGTAAAATAAT 57.553 40.909 0.00 0.00 0.00 1.28
476 477 3.935818 TGCCCTCCATCGGTAAAATAA 57.064 42.857 0.00 0.00 0.00 1.40
477 478 3.935818 TTGCCCTCCATCGGTAAAATA 57.064 42.857 0.00 0.00 0.00 1.40
478 479 2.818751 TTGCCCTCCATCGGTAAAAT 57.181 45.000 0.00 0.00 0.00 1.82
479 480 2.588464 TTTGCCCTCCATCGGTAAAA 57.412 45.000 0.00 0.00 32.81 1.52
480 481 2.650322 GATTTGCCCTCCATCGGTAAA 58.350 47.619 0.00 0.00 38.98 2.01
481 482 1.474320 CGATTTGCCCTCCATCGGTAA 60.474 52.381 0.00 0.00 36.89 2.85
482 483 0.105964 CGATTTGCCCTCCATCGGTA 59.894 55.000 0.00 0.00 36.89 4.02
483 484 1.153168 CGATTTGCCCTCCATCGGT 60.153 57.895 0.00 0.00 36.89 4.69
484 485 3.736483 CGATTTGCCCTCCATCGG 58.264 61.111 0.00 0.00 36.89 4.18
485 486 0.105964 TACCGATTTGCCCTCCATCG 59.894 55.000 0.00 0.00 39.63 3.84
486 487 2.341846 TTACCGATTTGCCCTCCATC 57.658 50.000 0.00 0.00 0.00 3.51
487 488 2.818751 TTTACCGATTTGCCCTCCAT 57.181 45.000 0.00 0.00 0.00 3.41
488 489 2.588464 TTTTACCGATTTGCCCTCCA 57.412 45.000 0.00 0.00 0.00 3.86
507 508 5.715434 ATAAGCCCAACATGTACGTTTTT 57.285 34.783 0.00 0.00 0.00 1.94
508 509 5.715434 AATAAGCCCAACATGTACGTTTT 57.285 34.783 0.00 0.00 0.00 2.43
509 510 5.715434 AAATAAGCCCAACATGTACGTTT 57.285 34.783 0.00 0.00 0.00 3.60
510 511 5.715434 AAAATAAGCCCAACATGTACGTT 57.285 34.783 0.00 0.00 0.00 3.99
511 512 5.124297 GGTAAAATAAGCCCAACATGTACGT 59.876 40.000 0.00 0.00 0.00 3.57
512 513 5.575019 GGTAAAATAAGCCCAACATGTACG 58.425 41.667 0.00 0.00 0.00 3.67
513 514 5.354792 TCGGTAAAATAAGCCCAACATGTAC 59.645 40.000 0.00 0.00 0.00 2.90
514 515 5.498393 TCGGTAAAATAAGCCCAACATGTA 58.502 37.500 0.00 0.00 0.00 2.29
515 516 4.337145 TCGGTAAAATAAGCCCAACATGT 58.663 39.130 0.00 0.00 0.00 3.21
516 517 4.974368 TCGGTAAAATAAGCCCAACATG 57.026 40.909 0.00 0.00 0.00 3.21
517 518 6.538945 AAATCGGTAAAATAAGCCCAACAT 57.461 33.333 0.00 0.00 0.00 2.71
518 519 5.986501 AAATCGGTAAAATAAGCCCAACA 57.013 34.783 0.00 0.00 0.00 3.33
541 542 6.858993 GTGTGCAAAGATAATGTCGGTAAAAA 59.141 34.615 0.00 0.00 0.00 1.94
542 543 6.017026 TGTGTGCAAAGATAATGTCGGTAAAA 60.017 34.615 0.00 0.00 0.00 1.52
543 544 5.470437 TGTGTGCAAAGATAATGTCGGTAAA 59.530 36.000 0.00 0.00 0.00 2.01
544 545 4.998033 TGTGTGCAAAGATAATGTCGGTAA 59.002 37.500 0.00 0.00 0.00 2.85
545 546 4.570930 TGTGTGCAAAGATAATGTCGGTA 58.429 39.130 0.00 0.00 0.00 4.02
546 547 3.407698 TGTGTGCAAAGATAATGTCGGT 58.592 40.909 0.00 0.00 0.00 4.69
547 548 4.418013 TTGTGTGCAAAGATAATGTCGG 57.582 40.909 0.00 0.00 0.00 4.79
548 549 5.284424 CACATTGTGTGCAAAGATAATGTCG 59.716 40.000 8.69 6.56 41.89 4.35
549 550 6.621737 CACATTGTGTGCAAAGATAATGTC 57.378 37.500 8.69 0.00 41.89 3.06
578 580 3.256631 GTGCCTTCATGACCATCTTGTTT 59.743 43.478 0.00 0.00 0.00 2.83
703 751 0.807667 CCACCGATGTGCAGAGCTAC 60.808 60.000 0.00 0.00 41.35 3.58
723 771 3.814268 CCTCGTGCCGCCATTTGG 61.814 66.667 0.00 0.00 38.53 3.28
737 785 0.686769 TCCTCCGGCCTCTAAACCTC 60.687 60.000 0.00 0.00 0.00 3.85
757 805 2.642183 TAGCCCCTACTGCCTCGGAG 62.642 65.000 0.00 0.00 0.00 4.63
893 981 7.681125 AAGTAGTAGAGCATTAACGAAATCG 57.319 36.000 0.48 0.48 46.33 3.34
896 984 8.517878 ACAGTAAGTAGTAGAGCATTAACGAAA 58.482 33.333 0.00 0.00 0.00 3.46
899 987 7.754027 ACAACAGTAAGTAGTAGAGCATTAACG 59.246 37.037 0.00 0.00 0.00 3.18
905 993 6.835819 ATGACAACAGTAAGTAGTAGAGCA 57.164 37.500 0.00 0.00 0.00 4.26
1317 1518 2.920384 TGGCACTGCGTCCAGGTA 60.920 61.111 0.00 0.00 43.53 3.08
1377 2075 2.037367 CTGGAGGAGGTGGTCGGA 59.963 66.667 0.00 0.00 0.00 4.55
1759 2457 4.874977 GGTAGCCAGCTCCGCGAC 62.875 72.222 8.23 6.94 0.00 5.19
1806 2510 3.774528 TGCGGGCTCTGCAGTAGG 61.775 66.667 14.67 6.67 37.44 3.18
1968 2672 1.215423 ACCACCCTGAAAGCACTTTCT 59.785 47.619 20.53 1.57 46.67 2.52
2160 2864 0.604780 ACGAGTCCTCTCCGTCGAAA 60.605 55.000 0.00 0.00 37.40 3.46
2168 2872 0.179184 GCAGAACGACGAGTCCTCTC 60.179 60.000 0.00 0.00 37.35 3.20
2223 2927 1.589716 GCTGGAAATTGCCGAGCACT 61.590 55.000 17.40 0.00 38.71 4.40
2256 2960 2.020720 ACGGTGATGTCAAACAGCAAA 58.979 42.857 0.00 0.00 46.78 3.68
2329 3033 3.067320 GGAGGGAGTACGTACATGGTAAC 59.933 52.174 26.55 11.42 0.00 2.50
2334 3038 1.386533 ACGGAGGGAGTACGTACATG 58.613 55.000 26.55 10.49 39.30 3.21
2341 3045 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
2342 3046 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
2343 3047 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
2344 3048 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
2345 3049 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
2346 3050 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
2347 3051 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
2348 3052 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
2349 3053 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
2350 3054 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
2351 3055 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
2352 3056 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
2353 3057 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
2354 3058 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
2355 3059 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
2356 3060 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
2357 3061 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
2358 3062 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
2359 3063 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
2360 3064 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
2361 3065 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
2362 3066 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
2363 3067 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
2364 3068 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
2365 3069 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
2366 3070 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
2367 3071 6.040955 AGTTCTAGATACATCCATTTCTGCGA 59.959 38.462 0.00 0.00 0.00 5.10
2368 3072 6.219473 AGTTCTAGATACATCCATTTCTGCG 58.781 40.000 0.00 0.00 0.00 5.18
2369 3073 9.547753 TTTAGTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
2395 3099 8.700051 GCAGGTATGGATGTATCTAGATGTATT 58.300 37.037 15.79 0.00 0.00 1.89
2396 3100 7.013750 CGCAGGTATGGATGTATCTAGATGTAT 59.986 40.741 15.79 9.11 0.00 2.29
2397 3101 6.318900 CGCAGGTATGGATGTATCTAGATGTA 59.681 42.308 15.79 4.44 0.00 2.29
2398 3102 5.126222 CGCAGGTATGGATGTATCTAGATGT 59.874 44.000 15.79 1.25 0.00 3.06
2399 3103 5.358160 TCGCAGGTATGGATGTATCTAGATG 59.642 44.000 15.79 0.00 0.00 2.90
2400 3104 5.358442 GTCGCAGGTATGGATGTATCTAGAT 59.642 44.000 10.73 10.73 0.00 1.98
2401 3105 4.700692 GTCGCAGGTATGGATGTATCTAGA 59.299 45.833 0.00 0.00 0.00 2.43
2402 3106 4.459337 TGTCGCAGGTATGGATGTATCTAG 59.541 45.833 0.00 0.00 0.00 2.43
2403 3107 4.403734 TGTCGCAGGTATGGATGTATCTA 58.596 43.478 0.00 0.00 0.00 1.98
2404 3108 3.230976 TGTCGCAGGTATGGATGTATCT 58.769 45.455 0.00 0.00 0.00 1.98
2405 3109 3.660501 TGTCGCAGGTATGGATGTATC 57.339 47.619 0.00 0.00 0.00 2.24
2406 3110 3.388024 ACTTGTCGCAGGTATGGATGTAT 59.612 43.478 0.00 0.00 0.00 2.29
2407 3111 2.764010 ACTTGTCGCAGGTATGGATGTA 59.236 45.455 0.00 0.00 0.00 2.29
2408 3112 1.555075 ACTTGTCGCAGGTATGGATGT 59.445 47.619 0.00 0.00 0.00 3.06
2409 3113 2.315925 ACTTGTCGCAGGTATGGATG 57.684 50.000 0.00 0.00 0.00 3.51
2410 3114 4.689612 ATTACTTGTCGCAGGTATGGAT 57.310 40.909 3.46 0.00 0.00 3.41
2411 3115 4.439057 GAATTACTTGTCGCAGGTATGGA 58.561 43.478 3.46 0.00 0.00 3.41
2412 3116 3.245284 CGAATTACTTGTCGCAGGTATGG 59.755 47.826 3.46 0.00 0.00 2.74
2413 3117 4.109766 TCGAATTACTTGTCGCAGGTATG 58.890 43.478 3.46 0.00 37.19 2.39
2414 3118 4.380841 TCGAATTACTTGTCGCAGGTAT 57.619 40.909 3.46 0.00 37.19 2.73
2415 3119 3.853831 TCGAATTACTTGTCGCAGGTA 57.146 42.857 0.00 0.00 37.19 3.08
2416 3120 2.736144 TCGAATTACTTGTCGCAGGT 57.264 45.000 0.00 0.91 37.19 4.00
2417 3121 3.720920 CGTTTCGAATTACTTGTCGCAGG 60.721 47.826 0.00 0.00 37.19 4.85
2418 3122 3.395671 CGTTTCGAATTACTTGTCGCAG 58.604 45.455 0.00 0.00 37.19 5.18
2419 3123 2.156117 CCGTTTCGAATTACTTGTCGCA 59.844 45.455 0.00 0.00 37.19 5.10
2420 3124 2.409378 TCCGTTTCGAATTACTTGTCGC 59.591 45.455 0.00 0.00 37.19 5.19
2421 3125 3.060363 CCTCCGTTTCGAATTACTTGTCG 59.940 47.826 0.00 0.00 38.62 4.35
2422 3126 3.370061 CCCTCCGTTTCGAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
2423 3127 3.007182 TCCCTCCGTTTCGAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
2424 3128 3.592059 TCCCTCCGTTTCGAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
2425 3129 3.260128 ACTCCCTCCGTTTCGAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
2426 3130 2.830321 ACTCCCTCCGTTTCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
2427 3131 3.242549 ACTCCCTCCGTTTCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
2428 3132 4.019174 AGTACTCCCTCCGTTTCGAATTA 58.981 43.478 0.00 0.00 0.00 1.40
2429 3133 2.830321 AGTACTCCCTCCGTTTCGAATT 59.170 45.455 0.00 0.00 0.00 2.17
2430 3134 2.454538 AGTACTCCCTCCGTTTCGAAT 58.545 47.619 0.00 0.00 0.00 3.34
2431 3135 1.915141 AGTACTCCCTCCGTTTCGAA 58.085 50.000 0.00 0.00 0.00 3.71
2432 3136 1.915141 AAGTACTCCCTCCGTTTCGA 58.085 50.000 0.00 0.00 0.00 3.71
2433 3137 2.230750 AGAAAGTACTCCCTCCGTTTCG 59.769 50.000 0.00 0.00 0.00 3.46
2434 3138 3.957591 AGAAAGTACTCCCTCCGTTTC 57.042 47.619 0.00 0.00 0.00 2.78
2435 3139 3.390311 ACAAGAAAGTACTCCCTCCGTTT 59.610 43.478 0.00 0.00 0.00 3.60
2436 3140 2.970640 ACAAGAAAGTACTCCCTCCGTT 59.029 45.455 0.00 0.00 0.00 4.44
2437 3141 2.299297 CACAAGAAAGTACTCCCTCCGT 59.701 50.000 0.00 0.00 0.00 4.69
2438 3142 2.353803 CCACAAGAAAGTACTCCCTCCG 60.354 54.545 0.00 0.00 0.00 4.63
2439 3143 2.027100 CCCACAAGAAAGTACTCCCTCC 60.027 54.545 0.00 0.00 0.00 4.30
2440 3144 2.638363 ACCCACAAGAAAGTACTCCCTC 59.362 50.000 0.00 0.00 0.00 4.30
2441 3145 2.372172 CACCCACAAGAAAGTACTCCCT 59.628 50.000 0.00 0.00 0.00 4.20
2442 3146 2.105993 ACACCCACAAGAAAGTACTCCC 59.894 50.000 0.00 0.00 0.00 4.30
2443 3147 3.400255 GACACCCACAAGAAAGTACTCC 58.600 50.000 0.00 0.00 0.00 3.85
2444 3148 3.181458 TGGACACCCACAAGAAAGTACTC 60.181 47.826 0.00 0.00 37.58 2.59
2541 3245 2.886523 CTGAAAATGCCAACTGTCCTCA 59.113 45.455 0.00 0.00 0.00 3.86
2547 3251 5.841810 TCCTTTTACTGAAAATGCCAACTG 58.158 37.500 0.00 0.00 34.08 3.16
2548 3252 6.478512 TTCCTTTTACTGAAAATGCCAACT 57.521 33.333 0.00 0.00 34.08 3.16
2568 3272 6.696148 ACGATTCTTATAACTGTGTCGATTCC 59.304 38.462 0.00 0.00 0.00 3.01
2573 3277 5.969435 TGCTACGATTCTTATAACTGTGTCG 59.031 40.000 0.00 0.00 0.00 4.35
2636 3341 4.651503 TCTCTTCCTAATCACTGGATGGAC 59.348 45.833 0.00 0.00 32.92 4.02
2653 3358 7.602265 CCAGCCTAAATTAGCTAGATTCTCTTC 59.398 40.741 0.00 0.00 37.18 2.87
2670 3377 5.864418 ACTATCATTACGACCAGCCTAAA 57.136 39.130 0.00 0.00 0.00 1.85
2699 3406 4.428294 AGTTGGCATGCATGATACTAGT 57.572 40.909 30.64 14.84 0.00 2.57
2724 3431 5.199723 TGCTATGCCACCTCATCAAAATTA 58.800 37.500 0.00 0.00 0.00 1.40
2746 3453 9.846248 CTACACCCTCTTTTTCTTCATTTAATG 57.154 33.333 0.00 0.00 0.00 1.90
2952 3678 7.124052 AGCTAAGTTACTCCCACTATGACTAA 58.876 38.462 0.00 0.00 0.00 2.24
2998 3724 5.821995 ACTTGCCACATAAGCAACAATTTTT 59.178 32.000 0.00 0.00 44.95 1.94
3005 3731 7.973388 TCATTAATTACTTGCCACATAAGCAAC 59.027 33.333 0.00 0.00 44.95 4.17
3067 3793 6.455647 TGTAGACTCATCGTGTCTTGAAAAT 58.544 36.000 4.25 0.00 41.45 1.82
3079 3805 8.803201 TCATTTATTAGCTTGTAGACTCATCG 57.197 34.615 0.00 0.00 0.00 3.84
3173 8294 6.377712 GGGAGTAACTTAGACTAGTGTCATGT 59.622 42.308 0.00 0.00 45.20 3.21
3216 8337 8.299990 AGTAATCAAGTAGCTCATGAACTAGT 57.700 34.615 6.08 6.86 0.00 2.57
3217 8338 8.629158 AGAGTAATCAAGTAGCTCATGAACTAG 58.371 37.037 6.08 0.00 0.00 2.57
3218 8339 8.526667 AGAGTAATCAAGTAGCTCATGAACTA 57.473 34.615 1.58 1.58 0.00 2.24
3219 8340 7.416964 AGAGTAATCAAGTAGCTCATGAACT 57.583 36.000 3.72 3.72 0.00 3.01
3220 8341 6.699642 GGAGAGTAATCAAGTAGCTCATGAAC 59.300 42.308 0.00 0.00 0.00 3.18
3221 8342 6.183360 GGGAGAGTAATCAAGTAGCTCATGAA 60.183 42.308 0.00 0.00 0.00 2.57
3222 8343 5.303078 GGGAGAGTAATCAAGTAGCTCATGA 59.697 44.000 0.00 0.00 0.00 3.07
3223 8344 5.304101 AGGGAGAGTAATCAAGTAGCTCATG 59.696 44.000 0.00 0.00 0.00 3.07
3224 8345 5.463154 AGGGAGAGTAATCAAGTAGCTCAT 58.537 41.667 0.00 0.00 0.00 2.90
3225 8346 4.873010 AGGGAGAGTAATCAAGTAGCTCA 58.127 43.478 0.00 0.00 0.00 4.26
3226 8347 7.533289 AATAGGGAGAGTAATCAAGTAGCTC 57.467 40.000 0.00 0.00 0.00 4.09
3227 8348 8.005388 TGTAATAGGGAGAGTAATCAAGTAGCT 58.995 37.037 0.00 0.00 0.00 3.32
3228 8349 8.179509 TGTAATAGGGAGAGTAATCAAGTAGC 57.820 38.462 0.00 0.00 0.00 3.58
3229 8350 9.357161 ACTGTAATAGGGAGAGTAATCAAGTAG 57.643 37.037 0.00 0.00 0.00 2.57
3230 8351 9.132923 CACTGTAATAGGGAGAGTAATCAAGTA 57.867 37.037 0.00 0.00 0.00 2.24
3231 8352 7.839705 TCACTGTAATAGGGAGAGTAATCAAGT 59.160 37.037 0.00 0.00 32.64 3.16
3232 8353 8.239038 TCACTGTAATAGGGAGAGTAATCAAG 57.761 38.462 0.00 0.00 32.64 3.02
3233 8354 8.783660 ATCACTGTAATAGGGAGAGTAATCAA 57.216 34.615 0.00 0.00 43.44 2.57
3234 8355 8.004801 TGATCACTGTAATAGGGAGAGTAATCA 58.995 37.037 0.00 0.00 43.44 2.57
3235 8356 8.410673 TGATCACTGTAATAGGGAGAGTAATC 57.589 38.462 0.00 0.00 43.44 1.75
3236 8357 8.228206 TCTGATCACTGTAATAGGGAGAGTAAT 58.772 37.037 0.00 0.00 43.44 1.89
3237 8358 7.583625 TCTGATCACTGTAATAGGGAGAGTAA 58.416 38.462 0.00 0.00 43.44 2.24
3238 8359 7.072581 TCTCTGATCACTGTAATAGGGAGAGTA 59.927 40.741 0.00 0.00 43.44 2.59
3239 8360 6.019656 TCTGATCACTGTAATAGGGAGAGT 57.980 41.667 0.00 0.00 43.44 3.24
3240 8361 6.303054 TCTCTGATCACTGTAATAGGGAGAG 58.697 44.000 0.00 0.00 43.44 3.20
3241 8362 6.267492 TCTCTGATCACTGTAATAGGGAGA 57.733 41.667 0.00 0.00 43.44 3.71
3242 8363 6.718912 TCATCTCTGATCACTGTAATAGGGAG 59.281 42.308 0.00 0.00 43.44 4.30
3243 8364 6.491745 GTCATCTCTGATCACTGTAATAGGGA 59.508 42.308 0.00 0.00 44.55 4.20
3244 8365 6.266330 TGTCATCTCTGATCACTGTAATAGGG 59.734 42.308 0.00 0.00 32.98 3.53
3245 8366 7.282332 TGTCATCTCTGATCACTGTAATAGG 57.718 40.000 0.00 0.00 32.98 2.57
3246 8367 7.328982 GCATGTCATCTCTGATCACTGTAATAG 59.671 40.741 0.00 0.00 32.98 1.73
3247 8368 7.150640 GCATGTCATCTCTGATCACTGTAATA 58.849 38.462 0.00 0.00 32.98 0.98
3248 8369 5.990386 GCATGTCATCTCTGATCACTGTAAT 59.010 40.000 0.00 0.00 32.98 1.89
3249 8370 5.354767 GCATGTCATCTCTGATCACTGTAA 58.645 41.667 0.00 0.00 32.98 2.41
3250 8371 4.498682 CGCATGTCATCTCTGATCACTGTA 60.499 45.833 0.00 0.00 32.98 2.74
3251 8372 3.737355 CGCATGTCATCTCTGATCACTGT 60.737 47.826 0.00 0.00 32.98 3.55
3252 8373 2.795470 CGCATGTCATCTCTGATCACTG 59.205 50.000 0.00 0.00 32.98 3.66
3253 8374 2.429971 ACGCATGTCATCTCTGATCACT 59.570 45.455 0.00 0.00 32.98 3.41
3254 8375 2.819115 ACGCATGTCATCTCTGATCAC 58.181 47.619 0.00 0.00 32.98 3.06
3255 8376 4.654091 TTACGCATGTCATCTCTGATCA 57.346 40.909 0.00 0.00 32.98 2.92
3256 8377 5.046529 AGTTTACGCATGTCATCTCTGATC 58.953 41.667 0.00 0.00 32.98 2.92
3257 8378 5.016051 AGTTTACGCATGTCATCTCTGAT 57.984 39.130 0.00 0.00 32.98 2.90
3258 8379 4.456280 AGTTTACGCATGTCATCTCTGA 57.544 40.909 0.00 0.00 0.00 3.27
3259 8380 5.120674 TCAAAGTTTACGCATGTCATCTCTG 59.879 40.000 0.00 0.00 0.00 3.35
3260 8381 5.237815 TCAAAGTTTACGCATGTCATCTCT 58.762 37.500 0.00 0.00 0.00 3.10
3261 8382 5.530519 TCAAAGTTTACGCATGTCATCTC 57.469 39.130 0.00 0.00 0.00 2.75
3262 8383 5.700832 TCTTCAAAGTTTACGCATGTCATCT 59.299 36.000 0.00 0.00 0.00 2.90
3263 8384 5.790495 GTCTTCAAAGTTTACGCATGTCATC 59.210 40.000 0.00 0.00 0.00 2.92
3264 8385 5.238432 TGTCTTCAAAGTTTACGCATGTCAT 59.762 36.000 0.00 0.00 0.00 3.06
3265 8386 4.572795 TGTCTTCAAAGTTTACGCATGTCA 59.427 37.500 0.00 0.00 0.00 3.58
3266 8387 5.090652 TGTCTTCAAAGTTTACGCATGTC 57.909 39.130 0.00 0.00 0.00 3.06
3267 8388 5.238432 TCATGTCTTCAAAGTTTACGCATGT 59.762 36.000 0.00 0.00 34.56 3.21
3268 8389 5.688823 TCATGTCTTCAAAGTTTACGCATG 58.311 37.500 0.00 0.00 34.33 4.06
3269 8390 5.940192 TCATGTCTTCAAAGTTTACGCAT 57.060 34.783 0.00 0.00 0.00 4.73
3270 8391 5.743026 TTCATGTCTTCAAAGTTTACGCA 57.257 34.783 0.00 0.00 0.00 5.24
3271 8392 8.015658 ACTAATTCATGTCTTCAAAGTTTACGC 58.984 33.333 0.00 0.00 0.00 4.42


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.