Multiple sequence alignment - TraesCS2A01G158200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G158200 chr2A 100.000 3685 0 0 1 3685 105406267 105409951 0.000000e+00 6806.0
1 TraesCS2A01G158200 chr2A 76.521 1397 298 21 1158 2536 30864710 30866094 0.000000e+00 736.0
2 TraesCS2A01G158200 chr2B 91.580 1734 116 13 963 2694 159098264 159099969 0.000000e+00 2366.0
3 TraesCS2A01G158200 chr2B 90.884 1075 96 2 1070 2144 158863530 158864602 0.000000e+00 1441.0
4 TraesCS2A01G158200 chr2B 77.591 1312 278 11 1158 2458 46677668 46678974 0.000000e+00 780.0
5 TraesCS2A01G158200 chr2B 89.130 552 46 5 2142 2685 158869145 158869690 0.000000e+00 675.0
6 TraesCS2A01G158200 chr2B 76.021 1347 290 22 1169 2488 6178720 6180060 0.000000e+00 667.0
7 TraesCS2A01G158200 chr2B 90.504 337 25 4 2698 3029 36926254 36925920 4.370000e-119 438.0
8 TraesCS2A01G158200 chr2B 90.504 337 25 4 2698 3029 36937660 36937326 4.370000e-119 438.0
9 TraesCS2A01G158200 chr2B 91.071 56 2 2 898 950 158863300 158863355 5.100000e-09 73.1
10 TraesCS2A01G158200 chr2B 95.455 44 2 0 898 941 159098164 159098207 1.840000e-08 71.3
11 TraesCS2A01G158200 chr2D 92.406 1646 110 6 1049 2685 109554165 109555804 0.000000e+00 2333.0
12 TraesCS2A01G158200 chr2D 90.805 1740 139 8 964 2692 109030562 109032291 0.000000e+00 2307.0
13 TraesCS2A01G158200 chr2D 91.101 1090 82 4 1612 2692 109129690 109130773 0.000000e+00 1461.0
14 TraesCS2A01G158200 chr2D 86.458 672 84 7 959 1628 109128830 109128164 0.000000e+00 730.0
15 TraesCS2A01G158200 chr2D 76.753 1312 289 11 1158 2458 28965049 28966355 0.000000e+00 719.0
16 TraesCS2A01G158200 chr2D 89.849 463 18 11 2 456 109553363 109553804 5.340000e-158 568.0
17 TraesCS2A01G158200 chr2D 90.448 335 28 2 2698 3029 618385089 618384756 4.370000e-119 438.0
18 TraesCS2A01G158200 chr2D 82.917 240 37 3 579 816 43432218 43432455 2.880000e-51 213.0
19 TraesCS2A01G158200 chr3D 81.595 1505 251 12 1057 2556 22272516 22273999 0.000000e+00 1221.0
20 TraesCS2A01G158200 chr3B 81.553 1442 238 13 1123 2556 39451833 39453254 0.000000e+00 1164.0
21 TraesCS2A01G158200 chr1D 92.378 656 47 2 3030 3685 314002226 314002878 0.000000e+00 931.0
22 TraesCS2A01G158200 chr1D 92.169 332 24 2 2698 3029 449314662 449314991 5.570000e-128 468.0
23 TraesCS2A01G158200 chr4A 90.382 655 63 0 3031 3685 54395716 54396370 0.000000e+00 861.0
24 TraesCS2A01G158200 chr5A 90.244 656 63 1 3030 3685 537758714 537758060 0.000000e+00 856.0
25 TraesCS2A01G158200 chr5A 84.848 264 35 4 554 816 397510420 397510161 1.020000e-65 261.0
26 TraesCS2A01G158200 chr7B 85.366 656 93 3 3031 3685 78706161 78706814 0.000000e+00 676.0
27 TraesCS2A01G158200 chr3A 81.467 750 131 5 1114 1856 31962940 31962192 3.150000e-170 608.0
28 TraesCS2A01G158200 chr5D 93.072 332 22 1 2698 3029 23066877 23066547 5.530000e-133 484.0
29 TraesCS2A01G158200 chr5D 92.192 333 23 3 2698 3029 502886268 502886598 5.570000e-128 468.0
30 TraesCS2A01G158200 chr5D 91.892 333 25 2 2698 3029 435463160 435462829 7.210000e-127 464.0
31 TraesCS2A01G158200 chr4D 91.892 333 25 2 2698 3029 442881568 442881237 7.210000e-127 464.0
32 TraesCS2A01G158200 chr7D 91.867 332 25 2 2698 3029 629278896 629279225 2.590000e-126 462.0
33 TraesCS2A01G158200 chr4B 92.398 171 13 0 3030 3200 630351496 630351666 1.020000e-60 244.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G158200 chr2A 105406267 105409951 3684 False 6806.00 6806 100.0000 1 3685 1 chr2A.!!$F2 3684
1 TraesCS2A01G158200 chr2A 30864710 30866094 1384 False 736.00 736 76.5210 1158 2536 1 chr2A.!!$F1 1378
2 TraesCS2A01G158200 chr2B 159098164 159099969 1805 False 1218.65 2366 93.5175 898 2694 2 chr2B.!!$F5 1796
3 TraesCS2A01G158200 chr2B 46677668 46678974 1306 False 780.00 780 77.5910 1158 2458 1 chr2B.!!$F2 1300
4 TraesCS2A01G158200 chr2B 158863300 158864602 1302 False 757.05 1441 90.9775 898 2144 2 chr2B.!!$F4 1246
5 TraesCS2A01G158200 chr2B 158869145 158869690 545 False 675.00 675 89.1300 2142 2685 1 chr2B.!!$F3 543
6 TraesCS2A01G158200 chr2B 6178720 6180060 1340 False 667.00 667 76.0210 1169 2488 1 chr2B.!!$F1 1319
7 TraesCS2A01G158200 chr2D 109030562 109032291 1729 False 2307.00 2307 90.8050 964 2692 1 chr2D.!!$F3 1728
8 TraesCS2A01G158200 chr2D 109129690 109130773 1083 False 1461.00 1461 91.1010 1612 2692 1 chr2D.!!$F4 1080
9 TraesCS2A01G158200 chr2D 109553363 109555804 2441 False 1450.50 2333 91.1275 2 2685 2 chr2D.!!$F5 2683
10 TraesCS2A01G158200 chr2D 109128164 109128830 666 True 730.00 730 86.4580 959 1628 1 chr2D.!!$R1 669
11 TraesCS2A01G158200 chr2D 28965049 28966355 1306 False 719.00 719 76.7530 1158 2458 1 chr2D.!!$F1 1300
12 TraesCS2A01G158200 chr3D 22272516 22273999 1483 False 1221.00 1221 81.5950 1057 2556 1 chr3D.!!$F1 1499
13 TraesCS2A01G158200 chr3B 39451833 39453254 1421 False 1164.00 1164 81.5530 1123 2556 1 chr3B.!!$F1 1433
14 TraesCS2A01G158200 chr1D 314002226 314002878 652 False 931.00 931 92.3780 3030 3685 1 chr1D.!!$F1 655
15 TraesCS2A01G158200 chr4A 54395716 54396370 654 False 861.00 861 90.3820 3031 3685 1 chr4A.!!$F1 654
16 TraesCS2A01G158200 chr5A 537758060 537758714 654 True 856.00 856 90.2440 3030 3685 1 chr5A.!!$R2 655
17 TraesCS2A01G158200 chr7B 78706161 78706814 653 False 676.00 676 85.3660 3031 3685 1 chr7B.!!$F1 654
18 TraesCS2A01G158200 chr3A 31962192 31962940 748 True 608.00 608 81.4670 1114 1856 1 chr3A.!!$R1 742

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
951 969 0.035598 TGGGAAGGATCGACGCAAAA 59.964 50.0 0.0 0.0 0.0 2.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2874 3028 0.033504 CCCGCACGCTATCCACTTAT 59.966 55.0 0.0 0.0 0.0 1.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 52 2.493278 GCCTTTACATGTGGCATCACTT 59.507 45.455 18.26 0.00 45.46 3.16
54 56 5.375417 TTTACATGTGGCATCACTTCAAG 57.625 39.130 9.11 0.00 43.94 3.02
77 79 0.825840 GCCAAAACCACCACTGCCTA 60.826 55.000 0.00 0.00 0.00 3.93
84 86 1.204146 CCACCACTGCCTACTGGTAT 58.796 55.000 0.00 0.00 38.84 2.73
125 127 8.902806 CAAGCATCCATTGATTAACTTTAGGTA 58.097 33.333 0.00 0.00 30.59 3.08
126 128 8.451908 AGCATCCATTGATTAACTTTAGGTAC 57.548 34.615 0.00 0.00 0.00 3.34
127 129 8.275040 AGCATCCATTGATTAACTTTAGGTACT 58.725 33.333 0.00 0.00 46.37 2.73
128 130 8.560374 GCATCCATTGATTAACTTTAGGTACTC 58.440 37.037 0.00 0.00 41.75 2.59
129 131 9.613428 CATCCATTGATTAACTTTAGGTACTCA 57.387 33.333 0.00 0.00 41.75 3.41
161 163 4.253685 CTCCGTAGAAGAAAGGCATTTGA 58.746 43.478 0.00 0.00 0.00 2.69
228 230 2.025155 ACGAGATAGACGTGAGCCAAT 58.975 47.619 0.00 0.00 42.37 3.16
266 272 7.450074 TCTGGAGTATGTTGTTTTACATGAGT 58.550 34.615 0.00 0.00 39.06 3.41
275 281 7.959175 TGTTGTTTTACATGAGTAGGAGTACT 58.041 34.615 0.00 0.00 42.59 2.73
387 393 1.105457 AGCTTACCACATACGCCGTA 58.895 50.000 0.00 0.00 0.00 4.02
398 404 5.463286 CACATACGCCGTATGGTAGATTAA 58.537 41.667 33.19 0.00 46.98 1.40
405 411 5.449304 GCCGTATGGTAGATTAACAATTGC 58.551 41.667 5.05 0.00 37.67 3.56
406 412 5.238650 GCCGTATGGTAGATTAACAATTGCT 59.761 40.000 5.05 0.00 37.67 3.91
414 420 7.170658 TGGTAGATTAACAATTGCTTTTTGTGC 59.829 33.333 5.05 0.00 37.38 4.57
445 451 2.366640 CCTCGAGGGACATTAGGAGA 57.633 55.000 24.62 0.00 37.23 3.71
446 452 2.235016 CCTCGAGGGACATTAGGAGAG 58.765 57.143 24.62 0.00 37.23 3.20
447 453 2.158593 CCTCGAGGGACATTAGGAGAGA 60.159 54.545 24.62 0.00 37.23 3.10
448 454 2.882137 CTCGAGGGACATTAGGAGAGAC 59.118 54.545 3.91 0.00 0.00 3.36
449 455 1.604755 CGAGGGACATTAGGAGAGACG 59.395 57.143 0.00 0.00 0.00 4.18
450 456 2.745482 CGAGGGACATTAGGAGAGACGA 60.745 54.545 0.00 0.00 0.00 4.20
451 457 3.288964 GAGGGACATTAGGAGAGACGAA 58.711 50.000 0.00 0.00 0.00 3.85
452 458 3.700038 GAGGGACATTAGGAGAGACGAAA 59.300 47.826 0.00 0.00 0.00 3.46
453 459 4.094476 AGGGACATTAGGAGAGACGAAAA 58.906 43.478 0.00 0.00 0.00 2.29
454 460 4.160626 AGGGACATTAGGAGAGACGAAAAG 59.839 45.833 0.00 0.00 0.00 2.27
455 461 4.081586 GGGACATTAGGAGAGACGAAAAGT 60.082 45.833 0.00 0.00 0.00 2.66
456 462 5.480205 GGACATTAGGAGAGACGAAAAGTT 58.520 41.667 0.00 0.00 0.00 2.66
457 463 5.577554 GGACATTAGGAGAGACGAAAAGTTC 59.422 44.000 0.00 0.00 0.00 3.01
458 464 5.480205 ACATTAGGAGAGACGAAAAGTTCC 58.520 41.667 0.00 0.00 0.00 3.62
459 465 5.246429 ACATTAGGAGAGACGAAAAGTTCCT 59.754 40.000 0.00 0.00 39.98 3.36
460 466 3.945981 AGGAGAGACGAAAAGTTCCTC 57.054 47.619 0.00 0.00 33.48 3.71
461 467 2.229302 AGGAGAGACGAAAAGTTCCTCG 59.771 50.000 5.93 5.93 33.48 4.63
462 468 1.987074 GAGAGACGAAAAGTTCCTCGC 59.013 52.381 7.12 0.00 38.64 5.03
463 469 1.340248 AGAGACGAAAAGTTCCTCGCA 59.660 47.619 7.12 0.00 38.64 5.10
464 470 2.132762 GAGACGAAAAGTTCCTCGCAA 58.867 47.619 7.12 0.00 38.64 4.85
465 471 2.542595 GAGACGAAAAGTTCCTCGCAAA 59.457 45.455 7.12 0.00 38.64 3.68
466 472 2.940410 AGACGAAAAGTTCCTCGCAAAA 59.060 40.909 7.12 0.00 38.64 2.44
467 473 3.375922 AGACGAAAAGTTCCTCGCAAAAA 59.624 39.130 7.12 0.00 38.64 1.94
514 520 1.631072 GTCATCGATGACGTTGCGG 59.369 57.895 35.44 5.08 46.46 5.69
517 523 3.693382 ATCGATGACGTTGCGGCGA 62.693 57.895 12.98 0.00 37.93 5.54
536 542 2.351726 CGATCACCCTTTCGTTTCATCC 59.648 50.000 0.00 0.00 0.00 3.51
539 545 2.027561 TCACCCTTTCGTTTCATCCGAT 60.028 45.455 0.00 0.00 33.81 4.18
543 549 4.189231 CCCTTTCGTTTCATCCGATACTT 58.811 43.478 0.00 0.00 33.81 2.24
561 567 7.120285 CCGATACTTACCAGGACGATCTATTAA 59.880 40.741 0.00 0.00 0.00 1.40
647 653 9.976511 CAATTAATCTCAGCCATTAATTCATGT 57.023 29.630 7.22 0.00 41.41 3.21
653 659 8.750515 TCTCAGCCATTAATTCATGTTAATCA 57.249 30.769 0.00 0.00 33.24 2.57
654 660 9.187996 TCTCAGCCATTAATTCATGTTAATCAA 57.812 29.630 0.00 0.00 33.24 2.57
655 661 9.806203 CTCAGCCATTAATTCATGTTAATCAAA 57.194 29.630 0.00 0.00 33.24 2.69
656 662 9.585099 TCAGCCATTAATTCATGTTAATCAAAC 57.415 29.630 0.00 0.00 33.24 2.93
669 675 7.759489 TGTTAATCAAACAACCTAGATTGCT 57.241 32.000 0.00 0.00 45.11 3.91
670 676 7.816640 TGTTAATCAAACAACCTAGATTGCTC 58.183 34.615 0.00 0.00 45.11 4.26
671 677 5.904362 AATCAAACAACCTAGATTGCTCC 57.096 39.130 0.00 0.00 32.47 4.70
672 678 4.365514 TCAAACAACCTAGATTGCTCCA 57.634 40.909 0.00 0.00 32.47 3.86
673 679 4.724399 TCAAACAACCTAGATTGCTCCAA 58.276 39.130 0.00 0.00 32.47 3.53
674 680 5.324409 TCAAACAACCTAGATTGCTCCAAT 58.676 37.500 0.00 0.00 36.72 3.16
675 681 6.480763 TCAAACAACCTAGATTGCTCCAATA 58.519 36.000 0.00 0.00 33.90 1.90
676 682 6.599244 TCAAACAACCTAGATTGCTCCAATAG 59.401 38.462 0.00 0.00 33.90 1.73
677 683 5.700402 ACAACCTAGATTGCTCCAATAGT 57.300 39.130 0.00 0.00 33.90 2.12
678 684 5.431765 ACAACCTAGATTGCTCCAATAGTG 58.568 41.667 0.00 0.00 33.90 2.74
679 685 5.189736 ACAACCTAGATTGCTCCAATAGTGA 59.810 40.000 0.00 0.00 33.90 3.41
680 686 5.543507 ACCTAGATTGCTCCAATAGTGAG 57.456 43.478 0.00 0.00 33.90 3.51
691 697 6.841443 CTCCAATAGTGAGCTCTTAACATG 57.159 41.667 16.19 7.09 0.00 3.21
692 698 6.299805 TCCAATAGTGAGCTCTTAACATGT 57.700 37.500 16.19 0.00 0.00 3.21
693 699 6.711277 TCCAATAGTGAGCTCTTAACATGTT 58.289 36.000 16.68 16.68 0.00 2.71
694 700 6.595326 TCCAATAGTGAGCTCTTAACATGTTG 59.405 38.462 21.42 5.44 0.00 3.33
695 701 6.595326 CCAATAGTGAGCTCTTAACATGTTGA 59.405 38.462 21.42 12.21 0.00 3.18
696 702 7.201591 CCAATAGTGAGCTCTTAACATGTTGAG 60.202 40.741 21.19 21.19 0.00 3.02
711 717 3.641648 TGTTGAGCATGCAACTAAAAGC 58.358 40.909 21.98 0.79 46.31 3.51
712 718 3.067883 TGTTGAGCATGCAACTAAAAGCA 59.932 39.130 21.98 3.32 46.31 3.91
786 792 9.971922 CGATATCCTATCTAATATCAACATGCA 57.028 33.333 0.00 0.00 35.50 3.96
801 807 7.750229 TCAACATGCAGTTAATTTTCTCTCT 57.250 32.000 0.00 0.00 38.74 3.10
802 808 8.846943 TCAACATGCAGTTAATTTTCTCTCTA 57.153 30.769 0.00 0.00 38.74 2.43
803 809 9.283768 TCAACATGCAGTTAATTTTCTCTCTAA 57.716 29.630 0.00 0.00 38.74 2.10
815 821 8.948631 AATTTTCTCTCTAATATCAACGAGCA 57.051 30.769 0.00 0.00 0.00 4.26
816 822 8.948631 ATTTTCTCTCTAATATCAACGAGCAA 57.051 30.769 0.00 0.00 0.00 3.91
817 823 8.948631 TTTTCTCTCTAATATCAACGAGCAAT 57.051 30.769 0.00 0.00 0.00 3.56
818 824 8.948631 TTTCTCTCTAATATCAACGAGCAATT 57.051 30.769 0.00 0.00 0.00 2.32
821 827 9.847706 TCTCTCTAATATCAACGAGCAATTATC 57.152 33.333 0.00 0.00 0.00 1.75
822 828 9.631452 CTCTCTAATATCAACGAGCAATTATCA 57.369 33.333 0.00 0.00 0.00 2.15
823 829 9.981114 TCTCTAATATCAACGAGCAATTATCAA 57.019 29.630 0.00 0.00 0.00 2.57
825 831 9.541143 TCTAATATCAACGAGCAATTATCAACA 57.459 29.630 0.00 0.00 0.00 3.33
828 834 5.878332 TCAACGAGCAATTATCAACATGT 57.122 34.783 0.00 0.00 0.00 3.21
829 835 6.976636 TCAACGAGCAATTATCAACATGTA 57.023 33.333 0.00 0.00 0.00 2.29
830 836 7.552458 TCAACGAGCAATTATCAACATGTAT 57.448 32.000 0.00 0.00 0.00 2.29
831 837 7.984391 TCAACGAGCAATTATCAACATGTATT 58.016 30.769 0.00 0.00 0.00 1.89
832 838 7.909641 TCAACGAGCAATTATCAACATGTATTG 59.090 33.333 12.11 12.11 0.00 1.90
833 839 6.201517 ACGAGCAATTATCAACATGTATTGC 58.798 36.000 25.56 25.56 46.98 3.56
836 842 6.189041 GCAATTATCAACATGTATTGCACG 57.811 37.500 26.96 5.99 46.27 5.34
837 843 5.743398 GCAATTATCAACATGTATTGCACGT 59.257 36.000 26.96 0.00 46.27 4.49
838 844 6.291217 GCAATTATCAACATGTATTGCACGTG 60.291 38.462 26.96 12.28 46.27 4.49
839 845 2.610219 TCAACATGTATTGCACGTGC 57.390 45.000 33.11 33.11 46.46 5.34
840 846 2.150390 TCAACATGTATTGCACGTGCT 58.850 42.857 37.59 23.28 46.46 4.40
841 847 2.159430 TCAACATGTATTGCACGTGCTC 59.841 45.455 37.59 24.71 46.46 4.26
842 848 1.807139 ACATGTATTGCACGTGCTCA 58.193 45.000 37.59 28.59 46.46 4.26
843 849 2.358957 ACATGTATTGCACGTGCTCAT 58.641 42.857 37.59 29.73 46.46 2.90
844 850 2.749076 ACATGTATTGCACGTGCTCATT 59.251 40.909 37.59 22.30 46.46 2.57
845 851 3.191162 ACATGTATTGCACGTGCTCATTT 59.809 39.130 37.59 24.41 46.46 2.32
846 852 4.394610 ACATGTATTGCACGTGCTCATTTA 59.605 37.500 37.59 21.10 46.46 1.40
847 853 4.335082 TGTATTGCACGTGCTCATTTAC 57.665 40.909 37.59 27.59 42.66 2.01
848 854 4.000325 TGTATTGCACGTGCTCATTTACT 59.000 39.130 37.59 15.59 42.66 2.24
849 855 5.172205 TGTATTGCACGTGCTCATTTACTA 58.828 37.500 37.59 14.52 42.66 1.82
850 856 5.639931 TGTATTGCACGTGCTCATTTACTAA 59.360 36.000 37.59 22.00 42.66 2.24
856 862 5.331607 GCACGTGCTCATTTACTAATACGAG 60.332 44.000 32.55 0.00 38.21 4.18
870 876 1.538047 TACGAGTAAAGTGGGCGTCT 58.462 50.000 0.00 0.00 36.51 4.18
878 884 1.053424 AAGTGGGCGTCTAGGTTCAA 58.947 50.000 0.00 0.00 0.00 2.69
884 890 2.957006 GGGCGTCTAGGTTCAATCTCTA 59.043 50.000 0.00 0.00 0.00 2.43
885 891 3.243468 GGGCGTCTAGGTTCAATCTCTAC 60.243 52.174 0.00 0.00 0.00 2.59
886 892 3.243468 GGCGTCTAGGTTCAATCTCTACC 60.243 52.174 0.00 0.00 0.00 3.18
887 893 3.243468 GCGTCTAGGTTCAATCTCTACCC 60.243 52.174 0.00 0.00 32.20 3.69
889 895 2.957006 TCTAGGTTCAATCTCTACCCGC 59.043 50.000 0.00 0.00 32.20 6.13
894 900 0.975556 TCAATCTCTACCCGCCTGCA 60.976 55.000 0.00 0.00 0.00 4.41
896 902 2.317149 AATCTCTACCCGCCTGCAGC 62.317 60.000 8.66 2.87 38.52 5.25
927 938 1.026718 CGGTGCCAGATTGGAGTTCC 61.027 60.000 0.00 0.00 40.96 3.62
950 968 0.251916 ATGGGAAGGATCGACGCAAA 59.748 50.000 0.00 0.00 0.00 3.68
951 969 0.035598 TGGGAAGGATCGACGCAAAA 59.964 50.000 0.00 0.00 0.00 2.44
952 970 0.727398 GGGAAGGATCGACGCAAAAG 59.273 55.000 0.00 0.00 0.00 2.27
955 973 0.517316 AAGGATCGACGCAAAAGCAC 59.483 50.000 0.00 0.00 0.00 4.40
956 974 1.134694 GGATCGACGCAAAAGCACC 59.865 57.895 0.00 0.00 0.00 5.01
957 975 1.573829 GGATCGACGCAAAAGCACCA 61.574 55.000 0.00 0.00 0.00 4.17
958 976 0.179215 GATCGACGCAAAAGCACCAG 60.179 55.000 0.00 0.00 0.00 4.00
960 978 2.050077 GACGCAAAAGCACCAGCC 60.050 61.111 0.00 0.00 43.56 4.85
961 979 3.879351 GACGCAAAAGCACCAGCCG 62.879 63.158 0.00 0.00 43.56 5.52
973 1022 4.856801 CAGCCGTTGCGCCCCTAT 62.857 66.667 4.18 0.00 44.33 2.57
974 1023 3.158648 AGCCGTTGCGCCCCTATA 61.159 61.111 4.18 0.00 44.33 1.31
975 1024 2.203098 GCCGTTGCGCCCCTATAA 60.203 61.111 4.18 0.00 0.00 0.98
979 1028 2.073816 CCGTTGCGCCCCTATAAATAG 58.926 52.381 4.18 0.00 0.00 1.73
984 1035 5.246307 GTTGCGCCCCTATAAATAGATCTT 58.754 41.667 4.18 0.00 32.05 2.40
1027 1083 5.541868 TCCATCTCAAATCATCCTACTCTCC 59.458 44.000 0.00 0.00 0.00 3.71
1047 1103 1.742831 CCTCTCTTCCTCACTGTCTCG 59.257 57.143 0.00 0.00 0.00 4.04
1060 1166 0.392706 TGTCTCGCACACACATTCCT 59.607 50.000 0.00 0.00 0.00 3.36
1089 1195 2.418628 ACATACGCTCCAAAAATCCACG 59.581 45.455 0.00 0.00 0.00 4.94
1092 1198 1.154035 GCTCCAAAAATCCACGCCG 60.154 57.895 0.00 0.00 0.00 6.46
1156 1269 1.589716 GAGCCAACACCACCATGAGC 61.590 60.000 0.00 0.00 0.00 4.26
1261 1377 3.991051 CGTGGACTGGCCGTCACT 61.991 66.667 23.07 0.00 44.68 3.41
1432 1557 4.473520 CGCCTCTCCAACCCGCAT 62.474 66.667 0.00 0.00 0.00 4.73
1441 1566 1.153369 CAACCCGCATCTCCGTGAT 60.153 57.895 0.00 0.00 35.40 3.06
1573 1704 2.094752 GGCGCAAATCTTGGCTTTCTTA 60.095 45.455 10.83 0.00 0.00 2.10
1591 1722 0.459585 TATTGCACCTCGCGGTTCTC 60.460 55.000 6.13 0.00 46.97 2.87
1942 2073 2.594303 CTGGACACGCAGCCCAAA 60.594 61.111 0.00 0.00 0.00 3.28
2097 2228 1.200484 GTCGAAGAACTCCGAGAAGCT 59.800 52.381 1.33 0.00 39.69 3.74
2384 2521 0.963962 GTACGACAAGGAGGTGGTGA 59.036 55.000 0.00 0.00 31.89 4.02
2494 2631 0.537653 GGGCGAAAGAGGCTCTACTT 59.462 55.000 19.07 9.50 36.85 2.24
2582 2735 4.690719 TGGCCGTGGGTGTAAGCG 62.691 66.667 0.00 0.00 33.03 4.68
2610 2763 4.146961 GCGTGAAGTCAATGTGTGATTTTG 59.853 41.667 0.00 0.00 36.39 2.44
2624 2778 7.108847 TGTGTGATTTTGGTTTCATCCTTTTT 58.891 30.769 0.00 0.00 0.00 1.94
2654 2808 7.228706 TCCTTTTTGACTTGTAGTTTCATCCTC 59.771 37.037 0.00 0.00 0.00 3.71
2659 2813 6.878317 TGACTTGTAGTTTCATCCTCTATGG 58.122 40.000 0.00 0.00 36.15 2.74
2660 2814 6.127054 TGACTTGTAGTTTCATCCTCTATGGG 60.127 42.308 0.00 0.00 36.15 4.00
2676 2830 3.560636 ATGGGCATGTACTTCCTACAC 57.439 47.619 0.00 0.00 38.22 2.90
2685 2839 6.089551 GCATGTACTTCCTACACGCAATATAG 59.910 42.308 0.00 0.00 42.89 1.31
2692 2846 8.204836 ACTTCCTACACGCAATATAGAGAAAAT 58.795 33.333 0.00 0.00 0.00 1.82
2693 2847 8.958119 TTCCTACACGCAATATAGAGAAAATT 57.042 30.769 0.00 0.00 0.00 1.82
2699 2853 9.559958 ACACGCAATATAGAGAAAATTTTTGAG 57.440 29.630 4.63 1.49 0.00 3.02
2700 2854 9.559958 CACGCAATATAGAGAAAATTTTTGAGT 57.440 29.630 4.63 2.10 0.00 3.41
2712 2866 9.471084 AGAAAATTTTTGAGTTAAATACACCGG 57.529 29.630 4.63 0.00 0.00 5.28
2713 2867 9.465985 GAAAATTTTTGAGTTAAATACACCGGA 57.534 29.630 9.46 0.00 0.00 5.14
2714 2868 9.471084 AAAATTTTTGAGTTAAATACACCGGAG 57.529 29.630 9.46 1.26 0.00 4.63
2730 2884 3.821421 CGGAGGTGCCTAAACTTATCT 57.179 47.619 0.00 0.00 0.00 1.98
2731 2885 4.138487 CGGAGGTGCCTAAACTTATCTT 57.862 45.455 0.00 0.00 0.00 2.40
2732 2886 3.871594 CGGAGGTGCCTAAACTTATCTTG 59.128 47.826 0.00 0.00 0.00 3.02
2733 2887 3.628032 GGAGGTGCCTAAACTTATCTTGC 59.372 47.826 0.00 0.00 0.00 4.01
2734 2888 4.261801 GAGGTGCCTAAACTTATCTTGCA 58.738 43.478 0.00 0.00 0.00 4.08
2735 2889 4.010349 AGGTGCCTAAACTTATCTTGCAC 58.990 43.478 0.00 0.00 45.02 4.57
2736 2890 3.181510 GGTGCCTAAACTTATCTTGCACG 60.182 47.826 0.00 0.00 46.29 5.34
2737 2891 3.006940 TGCCTAAACTTATCTTGCACGG 58.993 45.455 0.00 0.00 0.00 4.94
2738 2892 3.007635 GCCTAAACTTATCTTGCACGGT 58.992 45.455 0.00 0.00 0.00 4.83
2739 2893 3.439129 GCCTAAACTTATCTTGCACGGTT 59.561 43.478 0.00 0.00 0.00 4.44
2740 2894 4.632688 GCCTAAACTTATCTTGCACGGTTA 59.367 41.667 0.00 0.00 0.00 2.85
2741 2895 5.220605 GCCTAAACTTATCTTGCACGGTTAG 60.221 44.000 0.00 0.00 0.00 2.34
2742 2896 5.873164 CCTAAACTTATCTTGCACGGTTAGT 59.127 40.000 0.00 0.00 0.00 2.24
2743 2897 6.370718 CCTAAACTTATCTTGCACGGTTAGTT 59.629 38.462 2.33 2.33 0.00 2.24
2744 2898 6.628919 AAACTTATCTTGCACGGTTAGTTT 57.371 33.333 13.06 13.06 31.74 2.66
2745 2899 5.607119 ACTTATCTTGCACGGTTAGTTTG 57.393 39.130 0.00 0.00 0.00 2.93
2746 2900 4.454504 ACTTATCTTGCACGGTTAGTTTGG 59.545 41.667 0.00 0.00 0.00 3.28
2747 2901 2.335316 TCTTGCACGGTTAGTTTGGT 57.665 45.000 0.00 0.00 0.00 3.67
2748 2902 1.944024 TCTTGCACGGTTAGTTTGGTG 59.056 47.619 0.00 0.00 0.00 4.17
2751 2905 3.015516 CACGGTTAGTTTGGTGCCT 57.984 52.632 0.00 0.00 0.00 4.75
2752 2906 2.172851 CACGGTTAGTTTGGTGCCTA 57.827 50.000 0.00 0.00 0.00 3.93
2753 2907 2.496111 CACGGTTAGTTTGGTGCCTAA 58.504 47.619 0.00 0.00 0.00 2.69
2754 2908 2.879646 CACGGTTAGTTTGGTGCCTAAA 59.120 45.455 0.00 0.00 0.00 1.85
2755 2909 3.315749 CACGGTTAGTTTGGTGCCTAAAA 59.684 43.478 0.00 0.00 0.00 1.52
2756 2910 4.022676 CACGGTTAGTTTGGTGCCTAAAAT 60.023 41.667 0.00 0.00 0.00 1.82
2757 2911 4.585581 ACGGTTAGTTTGGTGCCTAAAATT 59.414 37.500 0.00 0.00 0.00 1.82
2758 2912 5.769162 ACGGTTAGTTTGGTGCCTAAAATTA 59.231 36.000 0.00 0.00 0.00 1.40
2759 2913 6.088173 CGGTTAGTTTGGTGCCTAAAATTAC 58.912 40.000 0.00 0.00 0.00 1.89
2760 2914 6.294065 CGGTTAGTTTGGTGCCTAAAATTACA 60.294 38.462 0.00 0.00 0.00 2.41
2761 2915 7.435305 GGTTAGTTTGGTGCCTAAAATTACAA 58.565 34.615 0.00 0.00 0.00 2.41
2762 2916 7.927092 GGTTAGTTTGGTGCCTAAAATTACAAA 59.073 33.333 0.00 0.00 0.00 2.83
2763 2917 9.315525 GTTAGTTTGGTGCCTAAAATTACAAAA 57.684 29.630 0.00 0.00 0.00 2.44
2766 2920 9.483916 AGTTTGGTGCCTAAAATTACAAAATAC 57.516 29.630 0.00 0.00 0.00 1.89
2767 2921 9.262358 GTTTGGTGCCTAAAATTACAAAATACA 57.738 29.630 0.00 0.00 0.00 2.29
2783 2937 8.542497 ACAAAATACATAAAACTAGTGCTCGA 57.458 30.769 0.00 0.00 0.00 4.04
2784 2938 8.995220 ACAAAATACATAAAACTAGTGCTCGAA 58.005 29.630 0.00 0.00 0.00 3.71
2785 2939 9.262472 CAAAATACATAAAACTAGTGCTCGAAC 57.738 33.333 0.00 0.00 0.00 3.95
2786 2940 8.773404 AAATACATAAAACTAGTGCTCGAACT 57.227 30.769 0.00 0.00 0.00 3.01
2787 2941 8.773404 AATACATAAAACTAGTGCTCGAACTT 57.227 30.769 0.00 0.00 0.00 2.66
2788 2942 6.467723 ACATAAAACTAGTGCTCGAACTTG 57.532 37.500 0.00 0.00 0.00 3.16
2789 2943 5.989777 ACATAAAACTAGTGCTCGAACTTGT 59.010 36.000 0.00 0.00 37.68 3.16
2790 2944 6.145696 ACATAAAACTAGTGCTCGAACTTGTC 59.854 38.462 0.00 0.00 35.50 3.18
2791 2945 2.726832 ACTAGTGCTCGAACTTGTCC 57.273 50.000 0.00 0.00 31.74 4.02
2792 2946 1.961394 ACTAGTGCTCGAACTTGTCCA 59.039 47.619 0.00 0.00 31.74 4.02
2793 2947 2.029828 ACTAGTGCTCGAACTTGTCCAG 60.030 50.000 0.00 0.00 31.74 3.86
2794 2948 0.753262 AGTGCTCGAACTTGTCCAGT 59.247 50.000 0.00 0.00 37.30 4.00
2795 2949 1.140816 GTGCTCGAACTTGTCCAGTC 58.859 55.000 0.00 0.00 32.94 3.51
2796 2950 0.750249 TGCTCGAACTTGTCCAGTCA 59.250 50.000 0.00 0.00 32.94 3.41
2797 2951 1.344438 TGCTCGAACTTGTCCAGTCAT 59.656 47.619 0.00 0.00 32.94 3.06
2798 2952 1.728971 GCTCGAACTTGTCCAGTCATG 59.271 52.381 0.00 0.00 32.94 3.07
2799 2953 1.728971 CTCGAACTTGTCCAGTCATGC 59.271 52.381 0.00 0.00 32.94 4.06
2800 2954 1.069978 TCGAACTTGTCCAGTCATGCA 59.930 47.619 0.00 0.00 32.94 3.96
2801 2955 1.872952 CGAACTTGTCCAGTCATGCAA 59.127 47.619 0.00 0.00 32.94 4.08
2802 2956 2.290367 CGAACTTGTCCAGTCATGCAAA 59.710 45.455 0.00 0.00 32.94 3.68
2803 2957 3.058016 CGAACTTGTCCAGTCATGCAAAT 60.058 43.478 0.00 0.00 32.94 2.32
2804 2958 4.154015 CGAACTTGTCCAGTCATGCAAATA 59.846 41.667 0.00 0.00 32.94 1.40
2805 2959 5.376854 AACTTGTCCAGTCATGCAAATAC 57.623 39.130 0.00 0.00 32.94 1.89
2806 2960 3.436704 ACTTGTCCAGTCATGCAAATACG 59.563 43.478 0.00 0.00 0.00 3.06
2807 2961 2.355197 TGTCCAGTCATGCAAATACGG 58.645 47.619 0.00 0.00 0.00 4.02
2808 2962 2.290008 TGTCCAGTCATGCAAATACGGT 60.290 45.455 0.00 0.00 0.00 4.83
2809 2963 2.095853 GTCCAGTCATGCAAATACGGTG 59.904 50.000 0.00 0.00 0.00 4.94
2810 2964 1.202177 CCAGTCATGCAAATACGGTGC 60.202 52.381 0.00 0.00 42.55 5.01
2811 2965 1.094785 AGTCATGCAAATACGGTGCC 58.905 50.000 0.00 0.00 41.49 5.01
2812 2966 1.094785 GTCATGCAAATACGGTGCCT 58.905 50.000 0.00 0.00 41.49 4.75
2813 2967 1.064060 GTCATGCAAATACGGTGCCTC 59.936 52.381 0.00 0.00 41.49 4.70
2814 2968 0.381801 CATGCAAATACGGTGCCTCC 59.618 55.000 0.00 0.00 41.49 4.30
2815 2969 0.255890 ATGCAAATACGGTGCCTCCT 59.744 50.000 0.00 0.00 41.49 3.69
2816 2970 0.037590 TGCAAATACGGTGCCTCCTT 59.962 50.000 0.00 0.00 41.49 3.36
2817 2971 0.733150 GCAAATACGGTGCCTCCTTC 59.267 55.000 0.00 0.00 35.91 3.46
2818 2972 1.379527 CAAATACGGTGCCTCCTTCC 58.620 55.000 0.00 0.00 0.00 3.46
2822 2976 3.217231 CGGTGCCTCCTTCCGTAT 58.783 61.111 0.00 0.00 39.51 3.06
2823 2977 1.520666 CGGTGCCTCCTTCCGTATT 59.479 57.895 0.00 0.00 39.51 1.89
2824 2978 0.529992 CGGTGCCTCCTTCCGTATTC 60.530 60.000 0.00 0.00 39.51 1.75
2825 2979 0.539986 GGTGCCTCCTTCCGTATTCA 59.460 55.000 0.00 0.00 0.00 2.57
2826 2980 1.065709 GGTGCCTCCTTCCGTATTCAA 60.066 52.381 0.00 0.00 0.00 2.69
2827 2981 2.617021 GGTGCCTCCTTCCGTATTCAAA 60.617 50.000 0.00 0.00 0.00 2.69
2828 2982 2.418976 GTGCCTCCTTCCGTATTCAAAC 59.581 50.000 0.00 0.00 0.00 2.93
2829 2983 1.664151 GCCTCCTTCCGTATTCAAACG 59.336 52.381 0.00 0.00 42.49 3.60
2830 2984 2.933928 GCCTCCTTCCGTATTCAAACGT 60.934 50.000 0.00 0.00 41.27 3.99
2831 2985 3.676873 GCCTCCTTCCGTATTCAAACGTA 60.677 47.826 0.00 0.00 41.27 3.57
2832 2986 3.861689 CCTCCTTCCGTATTCAAACGTAC 59.138 47.826 0.00 0.00 41.27 3.67
2833 2987 4.487948 CTCCTTCCGTATTCAAACGTACA 58.512 43.478 0.00 0.00 41.27 2.90
2834 2988 4.236935 TCCTTCCGTATTCAAACGTACAC 58.763 43.478 0.00 0.00 41.27 2.90
2835 2989 3.368843 CCTTCCGTATTCAAACGTACACC 59.631 47.826 0.00 0.00 41.27 4.16
2836 2990 2.958213 TCCGTATTCAAACGTACACCC 58.042 47.619 0.00 0.00 41.27 4.61
2837 2991 2.562298 TCCGTATTCAAACGTACACCCT 59.438 45.455 0.00 0.00 41.27 4.34
2838 2992 3.761218 TCCGTATTCAAACGTACACCCTA 59.239 43.478 0.00 0.00 41.27 3.53
2839 2993 3.859386 CCGTATTCAAACGTACACCCTAC 59.141 47.826 0.00 0.00 41.27 3.18
2840 2994 3.859386 CGTATTCAAACGTACACCCTACC 59.141 47.826 0.00 0.00 38.07 3.18
2841 2995 2.837532 TTCAAACGTACACCCTACCC 57.162 50.000 0.00 0.00 0.00 3.69
2842 2996 1.714541 TCAAACGTACACCCTACCCA 58.285 50.000 0.00 0.00 0.00 4.51
2843 2997 1.344114 TCAAACGTACACCCTACCCAC 59.656 52.381 0.00 0.00 0.00 4.61
2844 2998 1.070445 CAAACGTACACCCTACCCACA 59.930 52.381 0.00 0.00 0.00 4.17
2845 2999 1.648116 AACGTACACCCTACCCACAT 58.352 50.000 0.00 0.00 0.00 3.21
2846 3000 0.899720 ACGTACACCCTACCCACATG 59.100 55.000 0.00 0.00 0.00 3.21
2847 3001 1.187974 CGTACACCCTACCCACATGA 58.812 55.000 0.00 0.00 0.00 3.07
2848 3002 1.551430 CGTACACCCTACCCACATGAA 59.449 52.381 0.00 0.00 0.00 2.57
2849 3003 2.418197 CGTACACCCTACCCACATGAAG 60.418 54.545 0.00 0.00 0.00 3.02
2850 3004 1.742308 ACACCCTACCCACATGAAGT 58.258 50.000 0.00 0.00 0.00 3.01
2859 3013 3.713936 CACATGAAGTGCCAGCATG 57.286 52.632 0.00 0.00 42.15 4.06
2870 3024 2.034532 CAGCATGGCAGTGACCCA 59.965 61.111 0.00 0.00 36.66 4.51
2871 3025 2.034687 AGCATGGCAGTGACCCAC 59.965 61.111 0.00 0.00 34.68 4.61
2872 3026 2.282391 GCATGGCAGTGACCCACA 60.282 61.111 0.00 0.00 36.74 4.17
2873 3027 1.679977 GCATGGCAGTGACCCACAT 60.680 57.895 0.00 0.00 36.74 3.21
2874 3028 0.394216 GCATGGCAGTGACCCACATA 60.394 55.000 0.00 0.00 36.74 2.29
2875 3029 1.751733 GCATGGCAGTGACCCACATAT 60.752 52.381 0.00 0.00 36.74 1.78
2876 3030 2.487086 GCATGGCAGTGACCCACATATA 60.487 50.000 0.00 0.00 36.74 0.86
2877 3031 3.819368 CATGGCAGTGACCCACATATAA 58.181 45.455 0.00 0.00 36.74 0.98
2878 3032 3.558931 TGGCAGTGACCCACATATAAG 57.441 47.619 0.00 0.00 36.74 1.73
2879 3033 2.843730 TGGCAGTGACCCACATATAAGT 59.156 45.455 0.00 0.00 36.74 2.24
2880 3034 3.206150 GGCAGTGACCCACATATAAGTG 58.794 50.000 1.01 1.01 36.74 3.16
2890 3044 4.910746 CACATATAAGTGGATAGCGTGC 57.089 45.455 0.00 0.00 35.88 5.34
2891 3045 3.364920 CACATATAAGTGGATAGCGTGCG 59.635 47.826 0.00 0.00 35.88 5.34
2892 3046 2.717580 TATAAGTGGATAGCGTGCGG 57.282 50.000 0.00 0.00 0.00 5.69
2893 3047 0.033504 ATAAGTGGATAGCGTGCGGG 59.966 55.000 0.00 0.00 0.00 6.13
2894 3048 2.023414 TAAGTGGATAGCGTGCGGGG 62.023 60.000 0.00 0.00 0.00 5.73
2895 3049 3.845259 GTGGATAGCGTGCGGGGA 61.845 66.667 0.00 0.00 0.00 4.81
2896 3050 3.536917 TGGATAGCGTGCGGGGAG 61.537 66.667 0.00 0.00 0.00 4.30
2897 3051 4.301027 GGATAGCGTGCGGGGAGG 62.301 72.222 0.00 0.00 0.00 4.30
2898 3052 3.224324 GATAGCGTGCGGGGAGGA 61.224 66.667 0.00 0.00 0.00 3.71
2899 3053 2.762459 ATAGCGTGCGGGGAGGAA 60.762 61.111 0.00 0.00 0.00 3.36
2900 3054 2.100879 GATAGCGTGCGGGGAGGAAT 62.101 60.000 0.00 0.00 0.00 3.01
2901 3055 1.696097 ATAGCGTGCGGGGAGGAATT 61.696 55.000 0.00 0.00 0.00 2.17
2902 3056 1.044231 TAGCGTGCGGGGAGGAATTA 61.044 55.000 0.00 0.00 0.00 1.40
2903 3057 1.227853 GCGTGCGGGGAGGAATTAT 60.228 57.895 0.00 0.00 0.00 1.28
2904 3058 0.818040 GCGTGCGGGGAGGAATTATT 60.818 55.000 0.00 0.00 0.00 1.40
2905 3059 1.675552 CGTGCGGGGAGGAATTATTT 58.324 50.000 0.00 0.00 0.00 1.40
2906 3060 2.021457 CGTGCGGGGAGGAATTATTTT 58.979 47.619 0.00 0.00 0.00 1.82
2907 3061 2.223479 CGTGCGGGGAGGAATTATTTTG 60.223 50.000 0.00 0.00 0.00 2.44
2908 3062 1.754226 TGCGGGGAGGAATTATTTTGC 59.246 47.619 0.00 0.00 0.00 3.68
2909 3063 1.754226 GCGGGGAGGAATTATTTTGCA 59.246 47.619 0.00 0.00 0.00 4.08
2910 3064 2.223805 GCGGGGAGGAATTATTTTGCAG 60.224 50.000 0.00 0.00 0.00 4.41
2911 3065 3.287222 CGGGGAGGAATTATTTTGCAGA 58.713 45.455 0.00 0.00 0.00 4.26
2912 3066 3.699038 CGGGGAGGAATTATTTTGCAGAA 59.301 43.478 0.00 0.00 0.00 3.02
2913 3067 4.159506 CGGGGAGGAATTATTTTGCAGAAA 59.840 41.667 0.00 0.00 0.00 2.52
2914 3068 5.419542 GGGGAGGAATTATTTTGCAGAAAC 58.580 41.667 0.00 0.00 0.00 2.78
2915 3069 5.046663 GGGGAGGAATTATTTTGCAGAAACA 60.047 40.000 0.00 0.00 0.00 2.83
2916 3070 6.352137 GGGGAGGAATTATTTTGCAGAAACAT 60.352 38.462 0.00 0.00 0.00 2.71
2917 3071 6.758416 GGGAGGAATTATTTTGCAGAAACATC 59.242 38.462 0.00 0.00 0.00 3.06
2918 3072 6.758416 GGAGGAATTATTTTGCAGAAACATCC 59.242 38.462 0.00 0.59 0.00 3.51
2919 3073 6.643388 AGGAATTATTTTGCAGAAACATCCC 58.357 36.000 0.00 0.00 0.00 3.85
2920 3074 6.441604 AGGAATTATTTTGCAGAAACATCCCT 59.558 34.615 0.00 0.00 0.00 4.20
2921 3075 7.038088 AGGAATTATTTTGCAGAAACATCCCTT 60.038 33.333 0.00 0.00 0.00 3.95
2922 3076 7.064966 GGAATTATTTTGCAGAAACATCCCTTG 59.935 37.037 0.00 0.00 0.00 3.61
2923 3077 4.961438 ATTTTGCAGAAACATCCCTTGT 57.039 36.364 0.00 0.00 41.53 3.16
2924 3078 7.531857 TTATTTTGCAGAAACATCCCTTGTA 57.468 32.000 0.00 0.00 37.68 2.41
2925 3079 6.610075 ATTTTGCAGAAACATCCCTTGTAT 57.390 33.333 0.00 0.00 37.68 2.29
2926 3080 6.418057 TTTTGCAGAAACATCCCTTGTATT 57.582 33.333 0.00 0.00 37.68 1.89
2927 3081 6.418057 TTTGCAGAAACATCCCTTGTATTT 57.582 33.333 0.00 0.00 37.68 1.40
2928 3082 6.418057 TTGCAGAAACATCCCTTGTATTTT 57.582 33.333 0.00 0.00 37.68 1.82
2929 3083 7.531857 TTGCAGAAACATCCCTTGTATTTTA 57.468 32.000 0.00 0.00 37.68 1.52
2930 3084 7.716799 TGCAGAAACATCCCTTGTATTTTAT 57.283 32.000 0.00 0.00 37.68 1.40
2931 3085 8.133024 TGCAGAAACATCCCTTGTATTTTATT 57.867 30.769 0.00 0.00 37.68 1.40
2932 3086 8.592809 TGCAGAAACATCCCTTGTATTTTATTT 58.407 29.630 0.00 0.00 37.68 1.40
2952 3106 9.959721 TTTATTTAATCATGTAGGATAGCCCTC 57.040 33.333 0.00 0.00 43.31 4.30
2953 3107 7.574021 ATTTAATCATGTAGGATAGCCCTCA 57.426 36.000 0.00 0.00 43.31 3.86
2954 3108 7.387265 TTTAATCATGTAGGATAGCCCTCAA 57.613 36.000 0.00 0.00 43.31 3.02
2955 3109 5.912149 AATCATGTAGGATAGCCCTCAAA 57.088 39.130 0.00 0.00 43.31 2.69
2956 3110 6.460103 AATCATGTAGGATAGCCCTCAAAT 57.540 37.500 0.00 0.00 43.31 2.32
2957 3111 7.574021 AATCATGTAGGATAGCCCTCAAATA 57.426 36.000 0.00 0.00 43.31 1.40
2958 3112 6.360370 TCATGTAGGATAGCCCTCAAATAC 57.640 41.667 0.00 0.00 43.31 1.89
2959 3113 5.843969 TCATGTAGGATAGCCCTCAAATACA 59.156 40.000 0.00 0.00 43.31 2.29
2960 3114 5.808366 TGTAGGATAGCCCTCAAATACAG 57.192 43.478 0.00 0.00 43.31 2.74
2961 3115 5.216622 TGTAGGATAGCCCTCAAATACAGT 58.783 41.667 0.00 0.00 43.31 3.55
2962 3116 4.696479 AGGATAGCCCTCAAATACAGTG 57.304 45.455 0.00 0.00 43.31 3.66
2963 3117 4.040755 AGGATAGCCCTCAAATACAGTGT 58.959 43.478 0.00 0.00 43.31 3.55
2964 3118 5.216622 AGGATAGCCCTCAAATACAGTGTA 58.783 41.667 5.24 5.24 43.31 2.90
2965 3119 5.846714 AGGATAGCCCTCAAATACAGTGTAT 59.153 40.000 10.10 10.10 43.31 2.29
2966 3120 5.934625 GGATAGCCCTCAAATACAGTGTATG 59.065 44.000 16.46 7.03 0.00 2.39
2967 3121 3.545703 AGCCCTCAAATACAGTGTATGC 58.454 45.455 16.46 13.47 0.00 3.14
2968 3122 3.200825 AGCCCTCAAATACAGTGTATGCT 59.799 43.478 16.46 15.35 0.00 3.79
2969 3123 4.408921 AGCCCTCAAATACAGTGTATGCTA 59.591 41.667 16.46 4.38 0.00 3.49
2970 3124 4.511826 GCCCTCAAATACAGTGTATGCTAC 59.488 45.833 16.46 0.30 0.00 3.58
2971 3125 5.670485 CCCTCAAATACAGTGTATGCTACA 58.330 41.667 16.46 0.00 36.08 2.74
2972 3126 5.755375 CCCTCAAATACAGTGTATGCTACAG 59.245 44.000 16.46 8.32 39.77 2.74
2973 3127 6.406961 CCCTCAAATACAGTGTATGCTACAGA 60.407 42.308 16.46 7.67 39.77 3.41
2974 3128 6.699204 CCTCAAATACAGTGTATGCTACAGAG 59.301 42.308 16.46 14.85 39.77 3.35
2975 3129 7.404671 TCAAATACAGTGTATGCTACAGAGA 57.595 36.000 16.46 3.99 39.77 3.10
2976 3130 7.836842 TCAAATACAGTGTATGCTACAGAGAA 58.163 34.615 16.46 0.00 39.77 2.87
2977 3131 8.311109 TCAAATACAGTGTATGCTACAGAGAAA 58.689 33.333 16.46 0.00 39.77 2.52
2978 3132 8.598924 CAAATACAGTGTATGCTACAGAGAAAG 58.401 37.037 16.46 0.00 39.77 2.62
2979 3133 5.984695 ACAGTGTATGCTACAGAGAAAGA 57.015 39.130 0.00 0.00 39.77 2.52
2980 3134 6.346477 ACAGTGTATGCTACAGAGAAAGAA 57.654 37.500 0.00 0.00 39.77 2.52
2981 3135 6.159988 ACAGTGTATGCTACAGAGAAAGAAC 58.840 40.000 0.00 0.00 39.77 3.01
2982 3136 6.159293 CAGTGTATGCTACAGAGAAAGAACA 58.841 40.000 0.00 0.00 39.77 3.18
2983 3137 6.815641 CAGTGTATGCTACAGAGAAAGAACAT 59.184 38.462 0.00 0.00 39.77 2.71
2984 3138 6.815641 AGTGTATGCTACAGAGAAAGAACATG 59.184 38.462 0.00 0.00 39.77 3.21
2985 3139 6.813649 GTGTATGCTACAGAGAAAGAACATGA 59.186 38.462 0.00 0.00 39.77 3.07
2986 3140 7.331934 GTGTATGCTACAGAGAAAGAACATGAA 59.668 37.037 0.00 0.00 39.77 2.57
2987 3141 7.877612 TGTATGCTACAGAGAAAGAACATGAAA 59.122 33.333 0.00 0.00 34.06 2.69
2988 3142 7.750229 ATGCTACAGAGAAAGAACATGAAAA 57.250 32.000 0.00 0.00 0.00 2.29
2989 3143 7.566760 TGCTACAGAGAAAGAACATGAAAAA 57.433 32.000 0.00 0.00 0.00 1.94
3010 3164 5.880054 AAAATCTCCATGACGGTGTTTAG 57.120 39.130 0.00 0.00 35.57 1.85
3011 3165 4.819105 AATCTCCATGACGGTGTTTAGA 57.181 40.909 0.00 0.00 35.57 2.10
3012 3166 4.819105 ATCTCCATGACGGTGTTTAGAA 57.181 40.909 0.00 0.00 35.57 2.10
3013 3167 3.921677 TCTCCATGACGGTGTTTAGAAC 58.078 45.455 0.00 0.00 35.57 3.01
3014 3168 3.000727 CTCCATGACGGTGTTTAGAACC 58.999 50.000 0.00 0.00 35.57 3.62
3015 3169 2.635915 TCCATGACGGTGTTTAGAACCT 59.364 45.455 0.00 0.00 35.39 3.50
3016 3170 2.742053 CCATGACGGTGTTTAGAACCTG 59.258 50.000 0.00 0.00 35.39 4.00
3017 3171 1.873698 TGACGGTGTTTAGAACCTGC 58.126 50.000 0.00 0.00 35.39 4.85
3018 3172 1.139256 TGACGGTGTTTAGAACCTGCA 59.861 47.619 0.00 0.00 35.39 4.41
3019 3173 1.529865 GACGGTGTTTAGAACCTGCAC 59.470 52.381 0.00 0.00 35.39 4.57
3020 3174 0.872388 CGGTGTTTAGAACCTGCACC 59.128 55.000 0.00 0.00 44.31 5.01
3021 3175 1.542547 CGGTGTTTAGAACCTGCACCT 60.543 52.381 9.83 0.00 45.24 4.00
3022 3176 2.152016 GGTGTTTAGAACCTGCACCTC 58.848 52.381 0.00 0.00 44.35 3.85
3023 3177 2.152016 GTGTTTAGAACCTGCACCTCC 58.848 52.381 0.00 0.00 0.00 4.30
3024 3178 1.771854 TGTTTAGAACCTGCACCTCCA 59.228 47.619 0.00 0.00 0.00 3.86
3025 3179 2.224523 TGTTTAGAACCTGCACCTCCAG 60.225 50.000 0.00 0.00 0.00 3.86
3133 3288 2.619590 GGATAATGGTCAACCGGGTGTT 60.620 50.000 21.31 8.99 39.43 3.32
3157 3312 2.383527 CGTGAAAGCGAGGCTGGAC 61.384 63.158 0.00 0.00 39.62 4.02
3158 3313 2.035442 GTGAAAGCGAGGCTGGACC 61.035 63.158 0.00 0.00 39.62 4.46
3172 3327 1.303282 GGACCGAGCCTTTGGGAAT 59.697 57.895 0.00 0.00 33.58 3.01
3244 3399 3.265791 GACCGAGTCAGATCATTGCTTT 58.734 45.455 0.00 0.00 32.09 3.51
3319 3474 2.036862 ACCTTTTCGCTACGAGGAAGTT 59.963 45.455 11.56 0.00 37.14 2.66
3345 3500 1.226974 CCCATGCAGACTACGACCG 60.227 63.158 0.00 0.00 0.00 4.79
3394 3549 1.531602 GGGTCAGCAAGGTTTGGCT 60.532 57.895 0.00 0.00 42.06 4.75
3405 3560 1.203050 AGGTTTGGCTGGTGTGCTTAT 60.203 47.619 0.00 0.00 0.00 1.73
3536 3691 2.429930 CTGTTGGTCGAGGCCCAA 59.570 61.111 0.00 2.01 39.62 4.12
3583 3738 0.452585 AGCTACGAGAGGTTCTTCGC 59.547 55.000 0.00 0.00 29.01 4.70
3590 3745 1.002087 GAGAGGTTCTTCGCCAGGAAA 59.998 52.381 0.00 0.00 33.34 3.13
3599 3754 3.199946 TCTTCGCCAGGAAAAGATATGGT 59.800 43.478 0.00 0.00 35.17 3.55
3616 3771 4.069232 TTGCGCCAGAGGTCGAGG 62.069 66.667 4.18 0.00 0.00 4.63
3637 3792 1.195442 TACCCTGGTTGCGTCATGGA 61.195 55.000 0.00 0.00 0.00 3.41
3669 3824 3.706086 ACAAAGTTCTTTCATGCCCAAGT 59.294 39.130 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 1.070105 GGCGTGGAACCACTGTGTA 59.930 57.895 19.61 0.00 44.16 2.90
50 52 1.045911 GGTGGTTTTGGCACCCTTGA 61.046 55.000 0.00 0.00 35.73 3.02
54 56 1.760480 AGTGGTGGTTTTGGCACCC 60.760 57.895 0.00 0.00 38.17 4.61
125 127 4.607239 TCTACGGAGGACCTATTTTGAGT 58.393 43.478 0.00 0.00 0.00 3.41
126 128 5.360144 TCTTCTACGGAGGACCTATTTTGAG 59.640 44.000 0.00 0.00 0.00 3.02
127 129 5.266788 TCTTCTACGGAGGACCTATTTTGA 58.733 41.667 0.00 0.00 0.00 2.69
128 130 5.593679 TCTTCTACGGAGGACCTATTTTG 57.406 43.478 0.00 0.00 0.00 2.44
129 131 6.351966 CCTTTCTTCTACGGAGGACCTATTTT 60.352 42.308 0.00 0.00 0.00 1.82
130 132 5.128991 CCTTTCTTCTACGGAGGACCTATTT 59.871 44.000 0.00 0.00 0.00 1.40
131 133 4.650131 CCTTTCTTCTACGGAGGACCTATT 59.350 45.833 0.00 0.00 0.00 1.73
132 134 4.216708 CCTTTCTTCTACGGAGGACCTAT 58.783 47.826 0.00 0.00 0.00 2.57
133 135 3.629087 CCTTTCTTCTACGGAGGACCTA 58.371 50.000 0.00 0.00 0.00 3.08
134 136 2.458620 CCTTTCTTCTACGGAGGACCT 58.541 52.381 0.00 0.00 0.00 3.85
135 137 1.134759 GCCTTTCTTCTACGGAGGACC 60.135 57.143 0.00 0.00 0.00 4.46
136 138 1.549170 TGCCTTTCTTCTACGGAGGAC 59.451 52.381 0.00 0.00 0.00 3.85
137 139 1.933021 TGCCTTTCTTCTACGGAGGA 58.067 50.000 0.00 0.00 0.00 3.71
228 230 0.820226 CTCCAGAGGCTCGTTGATGA 59.180 55.000 9.22 0.22 0.00 2.92
266 272 3.623060 CACGCCGTTAACTAGTACTCCTA 59.377 47.826 0.00 0.00 0.00 2.94
275 281 1.149987 CCTTTGCACGCCGTTAACTA 58.850 50.000 3.71 0.00 0.00 2.24
304 310 2.033236 TCGAGAACGACAATGTTTGCAC 60.033 45.455 0.00 0.00 43.81 4.57
354 360 8.839310 ATGTGGTAAGCTAGCTATCTTAAATG 57.161 34.615 19.70 0.00 0.00 2.32
365 371 1.499049 GGCGTATGTGGTAAGCTAGC 58.501 55.000 6.62 6.62 37.83 3.42
366 372 1.066605 ACGGCGTATGTGGTAAGCTAG 59.933 52.381 12.58 0.00 37.83 3.42
374 380 1.610038 TCTACCATACGGCGTATGTGG 59.390 52.381 41.13 35.23 42.85 4.17
375 381 3.570926 ATCTACCATACGGCGTATGTG 57.429 47.619 41.13 35.13 42.85 3.21
387 393 9.206870 CACAAAAAGCAATTGTTAATCTACCAT 57.793 29.630 7.40 0.00 38.90 3.55
398 404 4.330620 CAGTTCAGCACAAAAAGCAATTGT 59.669 37.500 7.40 0.00 41.50 2.71
405 411 4.038402 AGGGAATCAGTTCAGCACAAAAAG 59.962 41.667 0.00 0.00 36.01 2.27
406 412 3.960102 AGGGAATCAGTTCAGCACAAAAA 59.040 39.130 0.00 0.00 36.01 1.94
411 417 1.066858 TCGAGGGAATCAGTTCAGCAC 60.067 52.381 0.00 0.00 36.01 4.40
414 420 2.593346 CCTCGAGGGAATCAGTTCAG 57.407 55.000 24.62 0.00 36.01 3.02
441 447 2.597520 CGAGGAACTTTTCGTCTCTCC 58.402 52.381 6.95 0.00 41.55 3.71
443 449 1.340248 TGCGAGGAACTTTTCGTCTCT 59.660 47.619 6.95 0.00 41.55 3.10
444 450 1.779569 TGCGAGGAACTTTTCGTCTC 58.220 50.000 6.95 0.71 41.55 3.36
445 451 2.234300 TTGCGAGGAACTTTTCGTCT 57.766 45.000 6.95 0.00 41.55 4.18
446 452 3.328237 TTTTGCGAGGAACTTTTCGTC 57.672 42.857 0.00 0.00 41.55 4.20
447 453 3.768468 TTTTTGCGAGGAACTTTTCGT 57.232 38.095 0.00 0.00 41.55 3.85
467 473 7.543756 TGGAATCAAACTTTTCGTCTCTTTTT 58.456 30.769 0.00 0.00 0.00 1.94
468 474 7.095695 TGGAATCAAACTTTTCGTCTCTTTT 57.904 32.000 0.00 0.00 0.00 2.27
469 475 6.693315 TGGAATCAAACTTTTCGTCTCTTT 57.307 33.333 0.00 0.00 0.00 2.52
470 476 6.884280 ATGGAATCAAACTTTTCGTCTCTT 57.116 33.333 0.00 0.00 0.00 2.85
510 516 2.435938 GAAAGGGTGATCGCCGCA 60.436 61.111 18.92 0.00 0.00 5.69
514 520 1.153353 TGAAACGAAAGGGTGATCGC 58.847 50.000 0.00 0.00 42.61 4.58
517 523 2.027561 TCGGATGAAACGAAAGGGTGAT 60.028 45.455 0.00 0.00 37.42 3.06
536 542 6.497785 AATAGATCGTCCTGGTAAGTATCG 57.502 41.667 0.00 0.00 0.00 2.92
539 545 8.701908 ATGTTAATAGATCGTCCTGGTAAGTA 57.298 34.615 0.00 0.00 0.00 2.24
543 549 9.085645 ACAATATGTTAATAGATCGTCCTGGTA 57.914 33.333 0.00 0.00 0.00 3.25
621 627 9.976511 ACATGAATTAATGGCTGAGATTAATTG 57.023 29.630 13.41 6.16 42.24 2.32
627 633 9.358406 TGATTAACATGAATTAATGGCTGAGAT 57.642 29.630 7.72 0.00 35.38 2.75
628 634 8.750515 TGATTAACATGAATTAATGGCTGAGA 57.249 30.769 7.72 0.00 35.38 3.27
629 635 9.806203 TTTGATTAACATGAATTAATGGCTGAG 57.194 29.630 7.72 0.00 35.38 3.35
630 636 9.585099 GTTTGATTAACATGAATTAATGGCTGA 57.415 29.630 7.72 0.00 35.38 4.26
631 637 9.368674 TGTTTGATTAACATGAATTAATGGCTG 57.631 29.630 7.72 0.00 41.73 4.85
632 638 9.941325 TTGTTTGATTAACATGAATTAATGGCT 57.059 25.926 7.72 0.00 45.72 4.75
633 639 9.971744 GTTGTTTGATTAACATGAATTAATGGC 57.028 29.630 7.72 0.00 45.72 4.40
642 648 8.243426 GCAATCTAGGTTGTTTGATTAACATGA 58.757 33.333 16.94 0.00 45.72 3.07
643 649 8.246180 AGCAATCTAGGTTGTTTGATTAACATG 58.754 33.333 16.94 0.00 45.72 3.21
644 650 8.353423 AGCAATCTAGGTTGTTTGATTAACAT 57.647 30.769 16.94 0.00 45.72 2.71
645 651 7.094377 GGAGCAATCTAGGTTGTTTGATTAACA 60.094 37.037 16.94 0.00 44.81 2.41
646 652 7.094377 TGGAGCAATCTAGGTTGTTTGATTAAC 60.094 37.037 16.94 0.00 37.26 2.01
647 653 6.945435 TGGAGCAATCTAGGTTGTTTGATTAA 59.055 34.615 16.94 0.00 0.00 1.40
648 654 6.480763 TGGAGCAATCTAGGTTGTTTGATTA 58.519 36.000 16.94 0.00 0.00 1.75
649 655 5.324409 TGGAGCAATCTAGGTTGTTTGATT 58.676 37.500 16.94 0.00 0.00 2.57
650 656 4.922206 TGGAGCAATCTAGGTTGTTTGAT 58.078 39.130 16.94 0.00 0.00 2.57
651 657 4.365514 TGGAGCAATCTAGGTTGTTTGA 57.634 40.909 16.94 0.00 0.00 2.69
652 658 5.649782 ATTGGAGCAATCTAGGTTGTTTG 57.350 39.130 16.94 2.53 26.27 2.93
653 659 6.375455 CACTATTGGAGCAATCTAGGTTGTTT 59.625 38.462 16.94 6.13 35.54 2.83
654 660 5.882557 CACTATTGGAGCAATCTAGGTTGTT 59.117 40.000 16.94 11.30 35.54 2.83
655 661 5.189736 TCACTATTGGAGCAATCTAGGTTGT 59.810 40.000 16.94 4.25 35.54 3.32
656 662 5.674525 TCACTATTGGAGCAATCTAGGTTG 58.325 41.667 11.61 11.61 35.54 3.77
657 663 5.923204 CTCACTATTGGAGCAATCTAGGTT 58.077 41.667 0.00 0.00 35.54 3.50
658 664 5.543507 CTCACTATTGGAGCAATCTAGGT 57.456 43.478 0.00 0.00 35.54 3.08
668 674 6.344500 ACATGTTAAGAGCTCACTATTGGAG 58.656 40.000 17.77 0.40 35.47 3.86
669 675 6.299805 ACATGTTAAGAGCTCACTATTGGA 57.700 37.500 17.77 0.00 0.00 3.53
670 676 6.595326 TCAACATGTTAAGAGCTCACTATTGG 59.405 38.462 17.77 2.94 0.00 3.16
671 677 7.601073 TCAACATGTTAAGAGCTCACTATTG 57.399 36.000 17.77 10.94 0.00 1.90
672 678 7.840342 CTCAACATGTTAAGAGCTCACTATT 57.160 36.000 17.77 3.66 0.00 1.73
689 695 4.240096 GCTTTTAGTTGCATGCTCAACAT 58.760 39.130 20.33 8.31 46.44 2.71
690 696 3.067883 TGCTTTTAGTTGCATGCTCAACA 59.932 39.130 20.33 4.39 46.44 3.33
691 697 3.641648 TGCTTTTAGTTGCATGCTCAAC 58.358 40.909 20.33 15.58 44.88 3.18
692 698 4.524316 ATGCTTTTAGTTGCATGCTCAA 57.476 36.364 20.33 2.28 46.58 3.02
760 766 9.971922 TGCATGTTGATATTAGATAGGATATCG 57.028 33.333 0.00 0.00 37.83 2.92
775 781 9.453572 AGAGAGAAAATTAACTGCATGTTGATA 57.546 29.630 10.59 0.00 39.55 2.15
776 782 8.345724 AGAGAGAAAATTAACTGCATGTTGAT 57.654 30.769 10.59 6.26 39.55 2.57
777 783 7.750229 AGAGAGAAAATTAACTGCATGTTGA 57.250 32.000 10.59 4.46 39.55 3.18
790 796 8.948631 TGCTCGTTGATATTAGAGAGAAAATT 57.051 30.769 5.77 0.00 32.84 1.82
791 797 8.948631 TTGCTCGTTGATATTAGAGAGAAAAT 57.051 30.769 5.77 0.00 32.84 1.82
792 798 8.948631 ATTGCTCGTTGATATTAGAGAGAAAA 57.051 30.769 5.77 1.46 32.84 2.29
793 799 8.948631 AATTGCTCGTTGATATTAGAGAGAAA 57.051 30.769 5.77 2.70 32.84 2.52
795 801 9.847706 GATAATTGCTCGTTGATATTAGAGAGA 57.152 33.333 5.77 0.00 32.84 3.10
796 802 9.631452 TGATAATTGCTCGTTGATATTAGAGAG 57.369 33.333 0.00 1.17 32.84 3.20
797 803 9.981114 TTGATAATTGCTCGTTGATATTAGAGA 57.019 29.630 0.00 0.00 32.84 3.10
799 805 9.541143 TGTTGATAATTGCTCGTTGATATTAGA 57.459 29.630 0.00 0.00 0.00 2.10
802 808 8.623903 ACATGTTGATAATTGCTCGTTGATATT 58.376 29.630 0.00 0.00 0.00 1.28
803 809 8.158169 ACATGTTGATAATTGCTCGTTGATAT 57.842 30.769 0.00 0.00 0.00 1.63
804 810 7.552458 ACATGTTGATAATTGCTCGTTGATA 57.448 32.000 0.00 0.00 0.00 2.15
805 811 6.441093 ACATGTTGATAATTGCTCGTTGAT 57.559 33.333 0.00 0.00 0.00 2.57
806 812 5.878332 ACATGTTGATAATTGCTCGTTGA 57.122 34.783 0.00 0.00 0.00 3.18
807 813 7.305590 GCAATACATGTTGATAATTGCTCGTTG 60.306 37.037 25.60 3.35 45.57 4.10
808 814 6.692681 GCAATACATGTTGATAATTGCTCGTT 59.307 34.615 25.60 0.00 45.57 3.85
809 815 6.201517 GCAATACATGTTGATAATTGCTCGT 58.798 36.000 25.60 0.00 45.57 4.18
810 816 6.664978 GCAATACATGTTGATAATTGCTCG 57.335 37.500 25.60 3.58 45.57 5.03
811 817 8.150279 ACGTGCAATACATGTTGATAATTGCTC 61.150 37.037 29.55 26.28 46.67 4.26
812 818 6.404623 ACGTGCAATACATGTTGATAATTGCT 60.405 34.615 29.55 16.18 46.67 3.91
813 819 5.743398 ACGTGCAATACATGTTGATAATTGC 59.257 36.000 25.92 25.92 46.67 3.56
814 820 6.291217 GCACGTGCAATACATGTTGATAATTG 60.291 38.462 34.52 8.78 46.67 2.32
815 821 5.743398 GCACGTGCAATACATGTTGATAATT 59.257 36.000 34.52 0.00 46.67 1.40
816 822 5.066375 AGCACGTGCAATACATGTTGATAAT 59.934 36.000 39.21 12.09 46.67 1.28
817 823 4.394610 AGCACGTGCAATACATGTTGATAA 59.605 37.500 39.21 0.00 46.67 1.75
818 824 3.938334 AGCACGTGCAATACATGTTGATA 59.062 39.130 39.21 0.00 46.67 2.15
819 825 2.749076 AGCACGTGCAATACATGTTGAT 59.251 40.909 39.21 13.65 46.67 2.57
820 826 2.150390 AGCACGTGCAATACATGTTGA 58.850 42.857 39.21 0.00 46.67 3.18
821 827 2.095819 TGAGCACGTGCAATACATGTTG 60.096 45.455 39.21 0.00 46.67 3.33
822 828 2.150390 TGAGCACGTGCAATACATGTT 58.850 42.857 39.21 17.85 46.67 2.71
824 830 3.409851 AATGAGCACGTGCAATACATG 57.590 42.857 39.21 0.82 45.16 3.21
825 831 4.635765 AGTAAATGAGCACGTGCAATACAT 59.364 37.500 39.21 30.76 45.16 2.29
826 832 4.000325 AGTAAATGAGCACGTGCAATACA 59.000 39.130 39.21 30.10 45.16 2.29
827 833 4.600012 AGTAAATGAGCACGTGCAATAC 57.400 40.909 39.21 29.13 45.16 1.89
828 834 6.918892 ATTAGTAAATGAGCACGTGCAATA 57.081 33.333 39.21 25.42 45.16 1.90
829 835 5.818136 ATTAGTAAATGAGCACGTGCAAT 57.182 34.783 39.21 28.80 45.16 3.56
830 836 5.220322 CGTATTAGTAAATGAGCACGTGCAA 60.220 40.000 39.21 27.93 45.16 4.08
831 837 4.266739 CGTATTAGTAAATGAGCACGTGCA 59.733 41.667 39.21 22.69 45.16 4.57
832 838 4.501559 TCGTATTAGTAAATGAGCACGTGC 59.498 41.667 32.79 32.79 42.49 5.34
833 839 5.742453 ACTCGTATTAGTAAATGAGCACGTG 59.258 40.000 12.28 12.28 29.56 4.49
834 840 5.888105 ACTCGTATTAGTAAATGAGCACGT 58.112 37.500 11.24 0.00 29.56 4.49
835 841 7.903452 TTACTCGTATTAGTAAATGAGCACG 57.097 36.000 11.24 0.00 38.64 5.34
836 842 9.298774 ACTTTACTCGTATTAGTAAATGAGCAC 57.701 33.333 9.04 0.00 45.89 4.40
837 843 9.297586 CACTTTACTCGTATTAGTAAATGAGCA 57.702 33.333 9.04 0.00 45.89 4.26
838 844 8.753175 CCACTTTACTCGTATTAGTAAATGAGC 58.247 37.037 9.04 0.00 45.89 4.26
839 845 9.245962 CCCACTTTACTCGTATTAGTAAATGAG 57.754 37.037 9.04 10.35 45.89 2.90
840 846 7.707893 GCCCACTTTACTCGTATTAGTAAATGA 59.292 37.037 9.04 0.00 45.89 2.57
841 847 7.306399 CGCCCACTTTACTCGTATTAGTAAATG 60.306 40.741 9.04 9.31 45.89 2.32
842 848 6.698766 CGCCCACTTTACTCGTATTAGTAAAT 59.301 38.462 9.04 0.00 45.89 1.40
843 849 6.035843 CGCCCACTTTACTCGTATTAGTAAA 58.964 40.000 8.45 8.45 45.26 2.01
844 850 5.125417 ACGCCCACTTTACTCGTATTAGTAA 59.875 40.000 0.00 0.00 39.57 2.24
845 851 4.640201 ACGCCCACTTTACTCGTATTAGTA 59.360 41.667 0.00 0.00 0.00 1.82
846 852 3.445096 ACGCCCACTTTACTCGTATTAGT 59.555 43.478 0.00 0.00 0.00 2.24
847 853 4.037858 ACGCCCACTTTACTCGTATTAG 57.962 45.455 0.00 0.00 0.00 1.73
848 854 3.696051 AGACGCCCACTTTACTCGTATTA 59.304 43.478 0.00 0.00 33.21 0.98
849 855 2.494870 AGACGCCCACTTTACTCGTATT 59.505 45.455 0.00 0.00 33.21 1.89
850 856 2.097825 AGACGCCCACTTTACTCGTAT 58.902 47.619 0.00 0.00 33.21 3.06
856 862 2.028748 TGAACCTAGACGCCCACTTTAC 60.029 50.000 0.00 0.00 0.00 2.01
864 870 3.243468 GGTAGAGATTGAACCTAGACGCC 60.243 52.174 0.00 0.00 0.00 5.68
866 872 3.003482 CGGGTAGAGATTGAACCTAGACG 59.997 52.174 0.00 0.00 33.59 4.18
870 876 2.037144 GGCGGGTAGAGATTGAACCTA 58.963 52.381 0.00 0.00 33.59 3.08
878 884 2.801631 GCTGCAGGCGGGTAGAGAT 61.802 63.158 17.12 0.00 0.00 2.75
886 892 4.399395 TTCTCAGGCTGCAGGCGG 62.399 66.667 31.82 30.95 46.23 6.13
887 893 2.818714 CTTCTCAGGCTGCAGGCG 60.819 66.667 31.82 25.58 46.23 5.52
889 895 0.676151 GAACCTTCTCAGGCTGCAGG 60.676 60.000 17.12 19.82 45.56 4.85
894 900 1.674057 CACCGAACCTTCTCAGGCT 59.326 57.895 0.00 0.00 45.56 4.58
927 938 0.595053 CGTCGATCCTTCCCATGACG 60.595 60.000 0.00 0.00 42.37 4.35
960 978 3.034721 TCTATTTATAGGGGCGCAACG 57.965 47.619 10.83 0.00 0.00 4.10
961 979 4.833390 AGATCTATTTATAGGGGCGCAAC 58.167 43.478 10.83 0.00 0.00 4.17
972 1021 9.838339 ATGAAGACGAACCAAAGATCTATTTAT 57.162 29.630 0.00 0.00 0.00 1.40
973 1022 9.314321 GATGAAGACGAACCAAAGATCTATTTA 57.686 33.333 0.00 0.00 0.00 1.40
974 1023 7.824289 TGATGAAGACGAACCAAAGATCTATTT 59.176 33.333 0.00 0.00 0.00 1.40
975 1024 7.331026 TGATGAAGACGAACCAAAGATCTATT 58.669 34.615 0.00 0.00 0.00 1.73
979 1028 5.814705 AGATGATGAAGACGAACCAAAGATC 59.185 40.000 0.00 0.00 0.00 2.75
984 1035 3.260632 TGGAGATGATGAAGACGAACCAA 59.739 43.478 0.00 0.00 0.00 3.67
1027 1083 1.742831 CGAGACAGTGAGGAAGAGAGG 59.257 57.143 0.00 0.00 0.00 3.69
1047 1103 1.803334 TCCGTTAGGAATGTGTGTGC 58.197 50.000 0.00 0.00 45.12 4.57
1060 1166 3.316071 TTGGAGCGTATGTTTCCGTTA 57.684 42.857 4.00 0.00 33.60 3.18
1092 1198 1.086634 AGCTTTCGCTTCTGATCGGC 61.087 55.000 0.00 0.00 46.47 5.54
1338 1457 2.496470 GGTAGACGGTGGAAAGAGATGT 59.504 50.000 0.00 0.00 0.00 3.06
1432 1557 1.515954 GGCGAGGAAATCACGGAGA 59.484 57.895 0.00 0.00 0.00 3.71
1520 1651 2.280186 GAAGTAGGCGGGGATGCG 60.280 66.667 0.00 0.00 35.06 4.73
1558 1689 4.774200 AGGTGCAATAAGAAAGCCAAGATT 59.226 37.500 0.00 0.00 0.00 2.40
1591 1722 2.252260 CTCGTGCTTTTGCCGTGG 59.748 61.111 0.00 0.00 46.87 4.94
1616 1747 0.786435 AGTTCTTGGCCCATTTCCCT 59.214 50.000 0.00 0.00 0.00 4.20
1942 2073 3.537206 GAGGAACACCACGCTGCCT 62.537 63.158 0.00 0.00 0.00 4.75
2384 2521 4.035102 GGCAACCTCCTCGGCCTT 62.035 66.667 0.00 0.00 43.09 4.35
2582 2735 1.195448 CACATTGACTTCACGCTCACC 59.805 52.381 0.00 0.00 0.00 4.02
2624 2778 9.936759 ATGAAACTACAAGTCAAAAAGGAAAAA 57.063 25.926 0.00 0.00 0.00 1.94
2625 2779 9.581099 GATGAAACTACAAGTCAAAAAGGAAAA 57.419 29.630 0.00 0.00 0.00 2.29
2626 2780 8.194769 GGATGAAACTACAAGTCAAAAAGGAAA 58.805 33.333 0.00 0.00 0.00 3.13
2627 2781 7.559897 AGGATGAAACTACAAGTCAAAAAGGAA 59.440 33.333 0.00 0.00 0.00 3.36
2628 2782 7.060421 AGGATGAAACTACAAGTCAAAAAGGA 58.940 34.615 0.00 0.00 0.00 3.36
2629 2783 7.229506 AGAGGATGAAACTACAAGTCAAAAAGG 59.770 37.037 0.00 0.00 0.00 3.11
2630 2784 8.159344 AGAGGATGAAACTACAAGTCAAAAAG 57.841 34.615 0.00 0.00 0.00 2.27
2631 2785 9.793259 ATAGAGGATGAAACTACAAGTCAAAAA 57.207 29.630 0.00 0.00 0.00 1.94
2654 2808 4.632153 GTGTAGGAAGTACATGCCCATAG 58.368 47.826 0.00 0.00 43.70 2.23
2692 2846 6.063404 ACCTCCGGTGTATTTAACTCAAAAA 58.937 36.000 0.00 0.00 32.98 1.94
2693 2847 5.623169 ACCTCCGGTGTATTTAACTCAAAA 58.377 37.500 0.00 0.00 32.98 2.44
2708 2862 1.648116 TAAGTTTAGGCACCTCCGGT 58.352 50.000 0.00 0.00 40.77 5.28
2709 2863 2.434702 AGATAAGTTTAGGCACCTCCGG 59.565 50.000 0.00 0.00 40.77 5.14
2710 2864 3.821421 AGATAAGTTTAGGCACCTCCG 57.179 47.619 0.00 0.00 40.77 4.63
2711 2865 3.628032 GCAAGATAAGTTTAGGCACCTCC 59.372 47.826 0.00 0.00 0.00 4.30
2712 2866 4.095036 GTGCAAGATAAGTTTAGGCACCTC 59.905 45.833 0.00 0.00 43.05 3.85
2713 2867 4.010349 GTGCAAGATAAGTTTAGGCACCT 58.990 43.478 0.00 0.00 43.05 4.00
2714 2868 3.181510 CGTGCAAGATAAGTTTAGGCACC 60.182 47.826 0.00 0.00 45.26 5.01
2715 2869 3.181510 CCGTGCAAGATAAGTTTAGGCAC 60.182 47.826 0.00 0.00 44.77 5.01
2716 2870 3.006940 CCGTGCAAGATAAGTTTAGGCA 58.993 45.455 0.00 0.00 0.00 4.75
2717 2871 3.007635 ACCGTGCAAGATAAGTTTAGGC 58.992 45.455 0.00 0.00 0.00 3.93
2718 2872 5.873164 ACTAACCGTGCAAGATAAGTTTAGG 59.127 40.000 0.00 0.00 0.00 2.69
2719 2873 6.963049 ACTAACCGTGCAAGATAAGTTTAG 57.037 37.500 0.00 1.40 0.00 1.85
2720 2874 7.308109 CCAAACTAACCGTGCAAGATAAGTTTA 60.308 37.037 18.13 2.08 34.97 2.01
2721 2875 6.435428 CAAACTAACCGTGCAAGATAAGTTT 58.565 36.000 15.10 15.10 36.61 2.66
2722 2876 5.048991 CCAAACTAACCGTGCAAGATAAGTT 60.049 40.000 0.00 4.61 0.00 2.66
2723 2877 4.454504 CCAAACTAACCGTGCAAGATAAGT 59.545 41.667 0.00 0.00 0.00 2.24
2724 2878 4.454504 ACCAAACTAACCGTGCAAGATAAG 59.545 41.667 0.00 0.00 0.00 1.73
2725 2879 4.214545 CACCAAACTAACCGTGCAAGATAA 59.785 41.667 0.00 0.00 0.00 1.75
2726 2880 3.749088 CACCAAACTAACCGTGCAAGATA 59.251 43.478 0.00 0.00 0.00 1.98
2727 2881 2.552315 CACCAAACTAACCGTGCAAGAT 59.448 45.455 0.00 0.00 0.00 2.40
2728 2882 1.944024 CACCAAACTAACCGTGCAAGA 59.056 47.619 0.00 0.00 0.00 3.02
2729 2883 2.399396 CACCAAACTAACCGTGCAAG 57.601 50.000 0.00 0.00 0.00 4.01
2732 2886 4.935630 GCACCAAACTAACCGTGC 57.064 55.556 0.00 0.00 44.17 5.34
2733 2887 2.172851 TAGGCACCAAACTAACCGTG 57.827 50.000 0.00 0.00 0.00 4.94
2734 2888 2.934886 TTAGGCACCAAACTAACCGT 57.065 45.000 0.00 0.00 0.00 4.83
2735 2889 4.776795 ATTTTAGGCACCAAACTAACCG 57.223 40.909 0.00 0.00 0.00 4.44
2736 2890 6.983984 TGTAATTTTAGGCACCAAACTAACC 58.016 36.000 0.00 0.00 0.00 2.85
2737 2891 8.874744 TTTGTAATTTTAGGCACCAAACTAAC 57.125 30.769 0.00 0.00 0.00 2.34
2740 2894 9.483916 GTATTTTGTAATTTTAGGCACCAAACT 57.516 29.630 0.00 0.00 0.00 2.66
2741 2895 9.262358 TGTATTTTGTAATTTTAGGCACCAAAC 57.738 29.630 0.00 0.00 0.00 2.93
2757 2911 9.642327 TCGAGCACTAGTTTTATGTATTTTGTA 57.358 29.630 0.00 0.00 0.00 2.41
2758 2912 8.542497 TCGAGCACTAGTTTTATGTATTTTGT 57.458 30.769 0.00 0.00 0.00 2.83
2759 2913 9.262472 GTTCGAGCACTAGTTTTATGTATTTTG 57.738 33.333 0.00 0.00 0.00 2.44
2760 2914 9.216117 AGTTCGAGCACTAGTTTTATGTATTTT 57.784 29.630 1.01 0.00 0.00 1.82
2761 2915 8.773404 AGTTCGAGCACTAGTTTTATGTATTT 57.227 30.769 1.01 0.00 0.00 1.40
2762 2916 8.656849 CAAGTTCGAGCACTAGTTTTATGTATT 58.343 33.333 1.01 0.00 0.00 1.89
2763 2917 7.817962 ACAAGTTCGAGCACTAGTTTTATGTAT 59.182 33.333 1.01 0.00 0.00 2.29
2764 2918 7.149973 ACAAGTTCGAGCACTAGTTTTATGTA 58.850 34.615 1.01 0.00 0.00 2.29
2765 2919 5.989777 ACAAGTTCGAGCACTAGTTTTATGT 59.010 36.000 1.01 0.00 0.00 2.29
2766 2920 6.401153 GGACAAGTTCGAGCACTAGTTTTATG 60.401 42.308 1.01 0.00 0.00 1.90
2767 2921 5.638234 GGACAAGTTCGAGCACTAGTTTTAT 59.362 40.000 1.01 0.00 0.00 1.40
2768 2922 4.986659 GGACAAGTTCGAGCACTAGTTTTA 59.013 41.667 1.01 0.00 0.00 1.52
2769 2923 3.808174 GGACAAGTTCGAGCACTAGTTTT 59.192 43.478 1.01 0.00 0.00 2.43
2770 2924 3.181469 TGGACAAGTTCGAGCACTAGTTT 60.181 43.478 1.01 0.00 0.00 2.66
2771 2925 2.364324 TGGACAAGTTCGAGCACTAGTT 59.636 45.455 1.01 0.00 0.00 2.24
2772 2926 1.961394 TGGACAAGTTCGAGCACTAGT 59.039 47.619 1.01 0.00 0.00 2.57
2773 2927 2.029828 ACTGGACAAGTTCGAGCACTAG 60.030 50.000 1.01 0.56 34.57 2.57
2774 2928 1.961394 ACTGGACAAGTTCGAGCACTA 59.039 47.619 1.01 0.00 34.57 2.74
2775 2929 0.753262 ACTGGACAAGTTCGAGCACT 59.247 50.000 1.01 0.00 34.57 4.40
2776 2930 1.140816 GACTGGACAAGTTCGAGCAC 58.859 55.000 1.01 0.00 40.07 4.40
2777 2931 0.750249 TGACTGGACAAGTTCGAGCA 59.250 50.000 1.01 0.00 40.07 4.26
2778 2932 1.728971 CATGACTGGACAAGTTCGAGC 59.271 52.381 0.00 0.00 40.07 5.03
2779 2933 1.728971 GCATGACTGGACAAGTTCGAG 59.271 52.381 0.00 0.00 40.07 4.04
2780 2934 1.069978 TGCATGACTGGACAAGTTCGA 59.930 47.619 0.00 0.00 40.07 3.71
2781 2935 1.511850 TGCATGACTGGACAAGTTCG 58.488 50.000 0.00 0.00 40.07 3.95
2782 2936 3.988379 TTTGCATGACTGGACAAGTTC 57.012 42.857 0.00 0.00 40.07 3.01
2783 2937 4.083324 CGTATTTGCATGACTGGACAAGTT 60.083 41.667 0.00 0.00 40.07 2.66
2784 2938 3.436704 CGTATTTGCATGACTGGACAAGT 59.563 43.478 0.00 0.00 43.85 3.16
2785 2939 3.181507 CCGTATTTGCATGACTGGACAAG 60.182 47.826 0.00 0.00 0.00 3.16
2786 2940 2.746904 CCGTATTTGCATGACTGGACAA 59.253 45.455 0.00 0.00 0.00 3.18
2787 2941 2.290008 ACCGTATTTGCATGACTGGACA 60.290 45.455 0.00 0.00 0.00 4.02
2788 2942 2.095853 CACCGTATTTGCATGACTGGAC 59.904 50.000 0.00 0.00 0.00 4.02
2789 2943 2.355197 CACCGTATTTGCATGACTGGA 58.645 47.619 0.00 0.00 0.00 3.86
2790 2944 1.202177 GCACCGTATTTGCATGACTGG 60.202 52.381 0.00 0.00 39.93 4.00
2791 2945 1.202177 GGCACCGTATTTGCATGACTG 60.202 52.381 0.00 0.00 42.12 3.51
2792 2946 1.094785 GGCACCGTATTTGCATGACT 58.905 50.000 0.00 0.00 42.12 3.41
2793 2947 1.064060 GAGGCACCGTATTTGCATGAC 59.936 52.381 0.00 0.00 42.12 3.06
2794 2948 1.378531 GAGGCACCGTATTTGCATGA 58.621 50.000 0.00 0.00 42.12 3.07
2795 2949 0.381801 GGAGGCACCGTATTTGCATG 59.618 55.000 0.00 0.00 42.12 4.06
2796 2950 0.255890 AGGAGGCACCGTATTTGCAT 59.744 50.000 0.00 0.00 42.12 3.96
2797 2951 0.037590 AAGGAGGCACCGTATTTGCA 59.962 50.000 0.00 0.00 42.12 4.08
2798 2952 0.733150 GAAGGAGGCACCGTATTTGC 59.267 55.000 0.00 0.00 44.74 3.68
2799 2953 1.379527 GGAAGGAGGCACCGTATTTG 58.620 55.000 0.00 0.00 44.74 2.32
2800 2954 0.107848 CGGAAGGAGGCACCGTATTT 60.108 55.000 0.00 0.00 44.74 1.40
2801 2955 1.520666 CGGAAGGAGGCACCGTATT 59.479 57.895 0.00 0.00 44.74 1.89
2802 2956 3.217231 CGGAAGGAGGCACCGTAT 58.783 61.111 0.00 0.00 44.74 3.06
2806 2960 0.539986 TGAATACGGAAGGAGGCACC 59.460 55.000 0.00 0.00 39.35 5.01
2807 2961 2.396590 TTGAATACGGAAGGAGGCAC 57.603 50.000 0.00 0.00 0.00 5.01
2808 2962 2.706890 GTTTGAATACGGAAGGAGGCA 58.293 47.619 0.00 0.00 0.00 4.75
2809 2963 1.664151 CGTTTGAATACGGAAGGAGGC 59.336 52.381 0.00 0.00 37.86 4.70
2810 2964 2.968675 ACGTTTGAATACGGAAGGAGG 58.031 47.619 0.00 0.00 45.44 4.30
2811 2965 4.325472 GTGTACGTTTGAATACGGAAGGAG 59.675 45.833 0.00 0.00 45.44 3.69
2812 2966 4.236935 GTGTACGTTTGAATACGGAAGGA 58.763 43.478 0.00 0.00 45.44 3.36
2813 2967 3.368843 GGTGTACGTTTGAATACGGAAGG 59.631 47.826 0.00 0.00 45.44 3.46
2814 2968 3.368843 GGGTGTACGTTTGAATACGGAAG 59.631 47.826 0.00 0.00 45.44 3.46
2815 2969 3.006752 AGGGTGTACGTTTGAATACGGAA 59.993 43.478 0.00 0.00 45.44 4.30
2816 2970 2.562298 AGGGTGTACGTTTGAATACGGA 59.438 45.455 0.00 0.00 45.44 4.69
2817 2971 2.963432 AGGGTGTACGTTTGAATACGG 58.037 47.619 0.00 0.00 45.44 4.02
2818 2972 3.859386 GGTAGGGTGTACGTTTGAATACG 59.141 47.826 0.00 0.00 46.52 3.06
2819 2973 4.183865 GGGTAGGGTGTACGTTTGAATAC 58.816 47.826 0.00 0.00 0.00 1.89
2820 2974 3.837146 TGGGTAGGGTGTACGTTTGAATA 59.163 43.478 0.00 0.00 0.00 1.75
2821 2975 2.638855 TGGGTAGGGTGTACGTTTGAAT 59.361 45.455 0.00 0.00 0.00 2.57
2822 2976 2.045524 TGGGTAGGGTGTACGTTTGAA 58.954 47.619 0.00 0.00 0.00 2.69
2823 2977 1.344114 GTGGGTAGGGTGTACGTTTGA 59.656 52.381 0.00 0.00 0.00 2.69
2824 2978 1.070445 TGTGGGTAGGGTGTACGTTTG 59.930 52.381 0.00 0.00 0.00 2.93
2825 2979 1.422531 TGTGGGTAGGGTGTACGTTT 58.577 50.000 0.00 0.00 0.00 3.60
2826 2980 1.276989 CATGTGGGTAGGGTGTACGTT 59.723 52.381 0.00 0.00 0.00 3.99
2827 2981 0.899720 CATGTGGGTAGGGTGTACGT 59.100 55.000 0.00 0.00 0.00 3.57
2828 2982 1.187974 TCATGTGGGTAGGGTGTACG 58.812 55.000 0.00 0.00 0.00 3.67
2829 2983 2.570302 ACTTCATGTGGGTAGGGTGTAC 59.430 50.000 0.00 0.00 0.00 2.90
2830 2984 2.569853 CACTTCATGTGGGTAGGGTGTA 59.430 50.000 0.00 0.00 42.68 2.90
2831 2985 1.351017 CACTTCATGTGGGTAGGGTGT 59.649 52.381 0.00 0.00 42.68 4.16
2832 2986 1.950484 GCACTTCATGTGGGTAGGGTG 60.950 57.143 0.00 0.00 46.27 4.61
2833 2987 0.328258 GCACTTCATGTGGGTAGGGT 59.672 55.000 0.00 0.00 46.27 4.34
2834 2988 0.394352 GGCACTTCATGTGGGTAGGG 60.394 60.000 0.00 0.00 46.27 3.53
2835 2989 0.327924 TGGCACTTCATGTGGGTAGG 59.672 55.000 0.00 0.00 46.27 3.18
2836 2990 1.742761 CTGGCACTTCATGTGGGTAG 58.257 55.000 0.00 0.00 46.27 3.18
2837 2991 0.322456 GCTGGCACTTCATGTGGGTA 60.322 55.000 0.00 0.00 46.27 3.69
2838 2992 1.604593 GCTGGCACTTCATGTGGGT 60.605 57.895 0.00 0.00 46.27 4.51
2839 2993 0.968901 ATGCTGGCACTTCATGTGGG 60.969 55.000 0.00 0.00 46.27 4.61
2840 2994 0.172578 CATGCTGGCACTTCATGTGG 59.827 55.000 0.00 0.00 46.27 4.17
2842 2996 2.575108 CCATGCTGGCACTTCATGT 58.425 52.632 14.56 0.00 37.17 3.21
2852 3006 2.753043 GGGTCACTGCCATGCTGG 60.753 66.667 0.00 0.00 41.55 4.85
2853 3007 2.034532 TGGGTCACTGCCATGCTG 59.965 61.111 0.00 0.00 0.00 4.41
2854 3008 2.034687 GTGGGTCACTGCCATGCT 59.965 61.111 0.00 0.00 0.00 3.79
2855 3009 0.394216 TATGTGGGTCACTGCCATGC 60.394 55.000 0.00 0.00 35.11 4.06
2856 3010 2.353357 ATATGTGGGTCACTGCCATG 57.647 50.000 0.00 0.00 35.11 3.66
2857 3011 3.459598 ACTTATATGTGGGTCACTGCCAT 59.540 43.478 0.00 0.00 35.11 4.40
2858 3012 2.843730 ACTTATATGTGGGTCACTGCCA 59.156 45.455 0.00 0.00 35.11 4.92
2859 3013 3.206150 CACTTATATGTGGGTCACTGCC 58.794 50.000 10.24 0.00 35.11 4.85
2869 3023 3.364920 CGCACGCTATCCACTTATATGTG 59.635 47.826 10.98 10.98 37.66 3.21
2870 3024 3.575630 CGCACGCTATCCACTTATATGT 58.424 45.455 0.00 0.00 0.00 2.29
2871 3025 2.923655 CCGCACGCTATCCACTTATATG 59.076 50.000 0.00 0.00 0.00 1.78
2872 3026 2.094182 CCCGCACGCTATCCACTTATAT 60.094 50.000 0.00 0.00 0.00 0.86
2873 3027 1.271379 CCCGCACGCTATCCACTTATA 59.729 52.381 0.00 0.00 0.00 0.98
2874 3028 0.033504 CCCGCACGCTATCCACTTAT 59.966 55.000 0.00 0.00 0.00 1.73
2875 3029 1.440060 CCCGCACGCTATCCACTTA 59.560 57.895 0.00 0.00 0.00 2.24
2876 3030 2.186903 CCCGCACGCTATCCACTT 59.813 61.111 0.00 0.00 0.00 3.16
2877 3031 3.849951 CCCCGCACGCTATCCACT 61.850 66.667 0.00 0.00 0.00 4.00
2878 3032 3.792053 CTCCCCGCACGCTATCCAC 62.792 68.421 0.00 0.00 0.00 4.02
2879 3033 3.536917 CTCCCCGCACGCTATCCA 61.537 66.667 0.00 0.00 0.00 3.41
2880 3034 4.301027 CCTCCCCGCACGCTATCC 62.301 72.222 0.00 0.00 0.00 2.59
2881 3035 2.100879 ATTCCTCCCCGCACGCTATC 62.101 60.000 0.00 0.00 0.00 2.08
2882 3036 1.696097 AATTCCTCCCCGCACGCTAT 61.696 55.000 0.00 0.00 0.00 2.97
2883 3037 1.044231 TAATTCCTCCCCGCACGCTA 61.044 55.000 0.00 0.00 0.00 4.26
2884 3038 1.696097 ATAATTCCTCCCCGCACGCT 61.696 55.000 0.00 0.00 0.00 5.07
2885 3039 0.818040 AATAATTCCTCCCCGCACGC 60.818 55.000 0.00 0.00 0.00 5.34
2886 3040 1.675552 AAATAATTCCTCCCCGCACG 58.324 50.000 0.00 0.00 0.00 5.34
2887 3041 2.481276 GCAAAATAATTCCTCCCCGCAC 60.481 50.000 0.00 0.00 0.00 5.34
2888 3042 1.754226 GCAAAATAATTCCTCCCCGCA 59.246 47.619 0.00 0.00 0.00 5.69
2889 3043 1.754226 TGCAAAATAATTCCTCCCCGC 59.246 47.619 0.00 0.00 0.00 6.13
2890 3044 3.287222 TCTGCAAAATAATTCCTCCCCG 58.713 45.455 0.00 0.00 0.00 5.73
2891 3045 5.046663 TGTTTCTGCAAAATAATTCCTCCCC 60.047 40.000 0.00 0.00 0.00 4.81
2892 3046 6.036577 TGTTTCTGCAAAATAATTCCTCCC 57.963 37.500 0.00 0.00 0.00 4.30
2893 3047 6.758416 GGATGTTTCTGCAAAATAATTCCTCC 59.242 38.462 0.00 0.00 0.00 4.30
2894 3048 6.758416 GGGATGTTTCTGCAAAATAATTCCTC 59.242 38.462 0.00 0.00 0.00 3.71
2895 3049 6.441604 AGGGATGTTTCTGCAAAATAATTCCT 59.558 34.615 10.63 10.63 0.00 3.36
2896 3050 6.643388 AGGGATGTTTCTGCAAAATAATTCC 58.357 36.000 0.00 0.00 0.00 3.01
2897 3051 7.603784 ACAAGGGATGTTTCTGCAAAATAATTC 59.396 33.333 0.00 0.00 40.06 2.17
2898 3052 7.452562 ACAAGGGATGTTTCTGCAAAATAATT 58.547 30.769 0.00 0.00 40.06 1.40
2899 3053 7.008021 ACAAGGGATGTTTCTGCAAAATAAT 57.992 32.000 0.00 0.00 40.06 1.28
2900 3054 6.418057 ACAAGGGATGTTTCTGCAAAATAA 57.582 33.333 0.00 0.00 40.06 1.40
2901 3055 7.716799 ATACAAGGGATGTTTCTGCAAAATA 57.283 32.000 0.00 0.00 43.63 1.40
2902 3056 4.961438 ACAAGGGATGTTTCTGCAAAAT 57.039 36.364 0.00 0.00 40.06 1.82
2903 3057 6.418057 AATACAAGGGATGTTTCTGCAAAA 57.582 33.333 0.00 0.00 43.63 2.44
2904 3058 6.418057 AAATACAAGGGATGTTTCTGCAAA 57.582 33.333 0.00 0.00 43.63 3.68
2905 3059 6.418057 AAAATACAAGGGATGTTTCTGCAA 57.582 33.333 0.00 0.00 43.63 4.08
2906 3060 7.716799 ATAAAATACAAGGGATGTTTCTGCA 57.283 32.000 0.00 0.00 43.63 4.41
2942 3096 4.423625 ACACTGTATTTGAGGGCTATCC 57.576 45.455 0.00 0.00 0.00 2.59
2943 3097 5.409826 GCATACACTGTATTTGAGGGCTATC 59.590 44.000 0.00 0.00 0.00 2.08
2944 3098 5.072329 AGCATACACTGTATTTGAGGGCTAT 59.928 40.000 7.38 0.00 0.00 2.97
2945 3099 4.408921 AGCATACACTGTATTTGAGGGCTA 59.591 41.667 7.38 0.00 0.00 3.93
2946 3100 3.200825 AGCATACACTGTATTTGAGGGCT 59.799 43.478 0.00 1.95 0.00 5.19
2947 3101 3.545703 AGCATACACTGTATTTGAGGGC 58.454 45.455 0.00 0.00 0.00 5.19
2948 3102 5.670485 TGTAGCATACACTGTATTTGAGGG 58.330 41.667 0.00 0.00 46.14 4.30
2949 3103 6.573434 TCTGTAGCATACACTGTATTTGAGG 58.427 40.000 0.00 0.00 46.14 3.86
2950 3104 7.484140 TCTCTGTAGCATACACTGTATTTGAG 58.516 38.462 0.00 2.62 46.14 3.02
2951 3105 7.404671 TCTCTGTAGCATACACTGTATTTGA 57.595 36.000 0.00 0.00 46.14 2.69
2952 3106 8.479313 TTTCTCTGTAGCATACACTGTATTTG 57.521 34.615 0.00 0.00 46.14 2.32
2953 3107 8.531982 TCTTTCTCTGTAGCATACACTGTATTT 58.468 33.333 0.00 0.00 46.14 1.40
2954 3108 8.067751 TCTTTCTCTGTAGCATACACTGTATT 57.932 34.615 0.00 0.00 46.14 1.89
2955 3109 7.646548 TCTTTCTCTGTAGCATACACTGTAT 57.353 36.000 0.00 0.00 46.14 2.29
2956 3110 7.039993 TGTTCTTTCTCTGTAGCATACACTGTA 60.040 37.037 0.00 0.00 46.14 2.74
2957 3111 5.984695 TCTTTCTCTGTAGCATACACTGT 57.015 39.130 0.00 0.00 46.14 3.55
2958 3112 6.159293 TGTTCTTTCTCTGTAGCATACACTG 58.841 40.000 0.00 0.00 46.14 3.66
2959 3113 6.346477 TGTTCTTTCTCTGTAGCATACACT 57.654 37.500 0.00 0.00 46.14 3.55
2960 3114 6.813649 TCATGTTCTTTCTCTGTAGCATACAC 59.186 38.462 0.00 0.00 46.14 2.90
2962 3116 7.834068 TTCATGTTCTTTCTCTGTAGCATAC 57.166 36.000 0.00 0.00 43.42 2.39
2963 3117 8.846943 TTTTCATGTTCTTTCTCTGTAGCATA 57.153 30.769 0.00 0.00 0.00 3.14
2964 3118 7.750229 TTTTCATGTTCTTTCTCTGTAGCAT 57.250 32.000 0.00 0.00 0.00 3.79
2965 3119 7.566760 TTTTTCATGTTCTTTCTCTGTAGCA 57.433 32.000 0.00 0.00 0.00 3.49
2987 3141 6.001460 TCTAAACACCGTCATGGAGATTTTT 58.999 36.000 0.00 0.00 42.00 1.94
2988 3142 5.556915 TCTAAACACCGTCATGGAGATTTT 58.443 37.500 0.00 0.00 42.00 1.82
2989 3143 5.160607 TCTAAACACCGTCATGGAGATTT 57.839 39.130 0.00 0.00 42.00 2.17
2990 3144 4.819105 TCTAAACACCGTCATGGAGATT 57.181 40.909 0.00 0.00 42.00 2.40
2991 3145 4.504858 GTTCTAAACACCGTCATGGAGAT 58.495 43.478 0.00 0.00 42.00 2.75
2992 3146 3.306502 GGTTCTAAACACCGTCATGGAGA 60.307 47.826 0.00 0.00 42.00 3.71
2993 3147 3.000727 GGTTCTAAACACCGTCATGGAG 58.999 50.000 0.00 0.00 42.00 3.86
2994 3148 2.635915 AGGTTCTAAACACCGTCATGGA 59.364 45.455 0.00 0.00 42.00 3.41
2995 3149 2.742053 CAGGTTCTAAACACCGTCATGG 59.258 50.000 0.00 0.00 46.41 3.66
2996 3150 2.159627 GCAGGTTCTAAACACCGTCATG 59.840 50.000 0.00 0.00 39.56 3.07
2997 3151 2.224426 TGCAGGTTCTAAACACCGTCAT 60.224 45.455 0.00 0.00 39.56 3.06
2998 3152 1.139256 TGCAGGTTCTAAACACCGTCA 59.861 47.619 0.00 0.00 39.56 4.35
2999 3153 1.529865 GTGCAGGTTCTAAACACCGTC 59.470 52.381 0.00 0.00 39.56 4.79
3000 3154 1.589803 GTGCAGGTTCTAAACACCGT 58.410 50.000 0.00 0.00 39.56 4.83
3001 3155 0.872388 GGTGCAGGTTCTAAACACCG 59.128 55.000 0.00 0.00 41.21 4.94
3003 3157 2.152016 GGAGGTGCAGGTTCTAAACAC 58.848 52.381 0.00 0.00 0.00 3.32
3004 3158 1.771854 TGGAGGTGCAGGTTCTAAACA 59.228 47.619 0.00 0.00 0.00 2.83
3005 3159 2.427506 CTGGAGGTGCAGGTTCTAAAC 58.572 52.381 0.00 0.00 0.00 2.01
3006 3160 1.351017 CCTGGAGGTGCAGGTTCTAAA 59.649 52.381 9.31 0.00 34.03 1.85
3007 3161 0.984230 CCTGGAGGTGCAGGTTCTAA 59.016 55.000 9.31 0.00 34.03 2.10
3008 3162 2.683916 CCTGGAGGTGCAGGTTCTA 58.316 57.895 9.31 0.00 34.03 2.10
3009 3163 3.488423 CCTGGAGGTGCAGGTTCT 58.512 61.111 9.31 0.00 34.03 3.01
3019 3173 1.002868 CTGCCACTCAACCTGGAGG 60.003 63.158 0.00 0.00 39.27 4.30
3020 3174 0.617413 ATCTGCCACTCAACCTGGAG 59.383 55.000 0.00 0.00 40.79 3.86
3021 3175 0.325933 CATCTGCCACTCAACCTGGA 59.674 55.000 0.00 0.00 0.00 3.86
3022 3176 1.310933 GCATCTGCCACTCAACCTGG 61.311 60.000 0.00 0.00 34.31 4.45
3023 3177 1.642037 CGCATCTGCCACTCAACCTG 61.642 60.000 0.00 0.00 37.91 4.00
3024 3178 1.376424 CGCATCTGCCACTCAACCT 60.376 57.895 0.00 0.00 37.91 3.50
3025 3179 1.364626 CTCGCATCTGCCACTCAACC 61.365 60.000 0.00 0.00 37.91 3.77
3026 3180 1.975363 GCTCGCATCTGCCACTCAAC 61.975 60.000 0.00 0.00 37.91 3.18
3027 3181 1.742880 GCTCGCATCTGCCACTCAA 60.743 57.895 0.00 0.00 37.91 3.02
3028 3182 2.125391 GCTCGCATCTGCCACTCA 60.125 61.111 0.00 0.00 37.91 3.41
3088 3242 0.472925 TGTACTCTGCCCCAGTCCAA 60.473 55.000 0.00 0.00 32.61 3.53
3133 3288 1.067142 AGCCTCGCTTTCACGTTATCA 60.067 47.619 0.00 0.00 33.89 2.15
3139 3294 2.048222 TCCAGCCTCGCTTTCACG 60.048 61.111 0.00 0.00 36.40 4.35
3157 3312 0.749454 CTGGATTCCCAAAGGCTCGG 60.749 60.000 0.00 0.00 42.98 4.63
3158 3313 0.253044 TCTGGATTCCCAAAGGCTCG 59.747 55.000 0.00 0.00 42.98 5.03
3172 3327 3.442625 CGTACATGTGAAGTAGGTCTGGA 59.557 47.826 9.11 0.00 0.00 3.86
3258 3413 1.940613 ACGCAGACACTTGTTTCTTCC 59.059 47.619 0.00 0.00 0.00 3.46
3259 3414 3.554324 TGTACGCAGACACTTGTTTCTTC 59.446 43.478 0.00 0.00 0.00 2.87
3319 3474 0.469705 AGTCTGCATGGGTTTGCCAA 60.470 50.000 0.00 0.00 42.06 4.52
3405 3560 1.532437 CTTGCATGTTCTGAAGTGCGA 59.468 47.619 17.56 15.68 40.34 5.10
3536 3691 0.250513 GTGGCCTTCTCTTCATCGGT 59.749 55.000 3.32 0.00 0.00 4.69
3568 3723 1.587054 CTGGCGAAGAACCTCTCGT 59.413 57.895 0.00 0.00 0.00 4.18
3569 3724 1.153745 CCTGGCGAAGAACCTCTCG 60.154 63.158 0.00 0.00 0.00 4.04
3583 3738 2.223572 GCGCAACCATATCTTTTCCTGG 60.224 50.000 0.30 0.00 34.84 4.45
3599 3754 4.069232 CCTCGACCTCTGGCGCAA 62.069 66.667 10.83 0.00 0.00 4.85
3637 3792 2.038387 AGAACTTTGTGTTGCGGTCT 57.962 45.000 0.00 0.00 39.30 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.