Multiple sequence alignment - TraesCS2A01G157900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G157900 chr2A 100.000 2709 0 0 978 3686 104872814 104870106 0.000000e+00 5003
1 TraesCS2A01G157900 chr2A 100.000 527 0 0 1 527 104873791 104873265 0.000000e+00 974
2 TraesCS2A01G157900 chr2A 92.593 108 7 1 3575 3681 249754459 249754566 1.770000e-33 154
3 TraesCS2A01G157900 chr2B 93.872 2611 135 8 991 3578 158621032 158618424 0.000000e+00 3912
4 TraesCS2A01G157900 chr2B 89.358 545 39 3 1 527 158621962 158621419 0.000000e+00 667
5 TraesCS2A01G157900 chr2D 95.304 1725 75 2 1053 2777 108924346 108922628 0.000000e+00 2732
6 TraesCS2A01G157900 chr2D 92.857 784 31 5 2810 3578 108922629 108921856 0.000000e+00 1114
7 TraesCS2A01G157900 chr2D 86.055 545 51 6 1 527 108925483 108924946 2.490000e-156 562
8 TraesCS2A01G157900 chr2D 92.593 108 7 1 3575 3681 250630726 250630833 1.770000e-33 154
9 TraesCS2A01G157900 chr2D 91.818 110 7 2 3575 3682 524963800 524963691 6.380000e-33 152
10 TraesCS2A01G157900 chr3A 93.578 109 6 1 3575 3682 251034980 251034872 1.060000e-35 161
11 TraesCS2A01G157900 chr3A 92.661 109 6 2 3575 3682 726769128 726769021 4.930000e-34 156
12 TraesCS2A01G157900 chr4A 91.304 115 9 1 3569 3682 213025412 213025526 4.930000e-34 156
13 TraesCS2A01G157900 chrUn 91.228 114 9 1 3570 3682 80232666 80232779 1.770000e-33 154
14 TraesCS2A01G157900 chr4D 91.818 110 8 1 3574 3682 21147731 21147840 6.380000e-33 152
15 TraesCS2A01G157900 chr3D 90.351 114 10 1 3571 3683 31577073 31577186 8.250000e-32 148


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G157900 chr2A 104870106 104873791 3685 True 2988.500000 5003 100.000000 1 3686 2 chr2A.!!$R1 3685
1 TraesCS2A01G157900 chr2B 158618424 158621962 3538 True 2289.500000 3912 91.615000 1 3578 2 chr2B.!!$R1 3577
2 TraesCS2A01G157900 chr2D 108921856 108925483 3627 True 1469.333333 2732 91.405333 1 3578 3 chr2D.!!$R2 3577

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
428 439 1.199097 CGATCAAAACCAGAAACGGGG 59.801 52.381 0.0 0.0 0.00 5.73 F
1581 1683 0.469892 TGATCGGGAGCTATGCCAGA 60.470 55.000 0.0 0.0 36.52 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2340 2442 0.036388 AGCCATAGTGTTCGGTGTGG 60.036 55.0 0.0 0.0 0.00 4.17 R
3276 3401 0.603065 CACCAGTCATCACCTCGACA 59.397 55.0 0.0 0.0 34.48 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 3.257873 CCCATCTGCACCACAACAAAATA 59.742 43.478 0.00 0.00 0.00 1.40
111 120 5.049954 ACAACACAAGCACGTAAAATATCGT 60.050 36.000 0.00 0.00 40.99 3.73
121 130 4.567558 ACGTAAAATATCGTGCGGAAATGA 59.432 37.500 0.00 0.00 38.85 2.57
180 189 8.227791 ACGAACACTATGTATTAAAAGCACAAG 58.772 33.333 0.00 0.00 0.00 3.16
335 346 9.704098 GATCATAACCAAAATCTCTCGTTTTAC 57.296 33.333 0.00 0.00 0.00 2.01
374 385 4.744795 ACCAGGCTAGTCTACAAATCTG 57.255 45.455 0.00 0.00 0.00 2.90
428 439 1.199097 CGATCAAAACCAGAAACGGGG 59.801 52.381 0.00 0.00 0.00 5.73
481 502 1.662629 CACTGCCTCATGAAACTAGCG 59.337 52.381 0.00 0.00 0.00 4.26
484 505 3.201290 CTGCCTCATGAAACTAGCGAAT 58.799 45.455 0.00 0.00 0.00 3.34
488 509 4.260538 GCCTCATGAAACTAGCGAATCAAG 60.261 45.833 0.00 0.00 0.00 3.02
510 531 1.456705 GGATCGGCCCAGAGAGAGT 60.457 63.158 0.00 0.00 0.00 3.24
1270 1372 3.157949 CCTCGCCCTCCTTCTCCC 61.158 72.222 0.00 0.00 0.00 4.30
1443 1545 2.434359 CTGCGGTTCGGGTTCTCC 60.434 66.667 0.00 0.00 0.00 3.71
1496 1598 2.697751 ACTTCTACTGCTGCATAGGGAG 59.302 50.000 1.31 10.77 35.23 4.30
1581 1683 0.469892 TGATCGGGAGCTATGCCAGA 60.470 55.000 0.00 0.00 36.52 3.86
1582 1684 0.681733 GATCGGGAGCTATGCCAGAA 59.318 55.000 0.00 0.00 36.52 3.02
1587 1689 1.686325 GGAGCTATGCCAGAACCGGA 61.686 60.000 9.46 0.00 0.00 5.14
1617 1719 2.358737 GCGGTGGAGGTGTTCAGG 60.359 66.667 0.00 0.00 0.00 3.86
1648 1750 1.800805 CTGTGGTGTGGATGTCAGTC 58.199 55.000 0.00 0.00 0.00 3.51
1782 1884 4.852697 GGGATGTATTCTAGGAAAGGGGAT 59.147 45.833 0.00 0.00 0.00 3.85
1791 1893 3.532641 AGGAAAGGGGATATTGGATGC 57.467 47.619 0.00 0.00 0.00 3.91
1857 1959 5.707298 GCTGTATAATTGCATGGTGGATAGT 59.293 40.000 0.00 0.00 0.00 2.12
1997 2099 1.507630 CAATCGTACCCGGTCGTCA 59.492 57.895 0.00 0.00 33.95 4.35
2025 2127 4.112341 CTTGCGCTGGAGCTTGGC 62.112 66.667 9.73 0.00 39.32 4.52
2208 2310 2.128035 GCGATATCCCTGTTTCACTCG 58.872 52.381 0.00 0.00 0.00 4.18
2219 2321 1.532868 GTTTCACTCGATGCAGCAAGT 59.467 47.619 1.53 0.00 0.00 3.16
2259 2361 1.197036 GTTACCTTTCTTGCGGTGCTC 59.803 52.381 0.00 0.00 34.76 4.26
2340 2442 3.581332 TCCGGAAATATGGTATGTCTCCC 59.419 47.826 0.00 0.00 0.00 4.30
2385 2487 1.299468 CGATCTCCTCGGAAAGGCG 60.299 63.158 0.00 0.00 45.78 5.52
2504 2606 0.692419 AATGTCGAGCTGGGGAGGAT 60.692 55.000 0.00 0.00 0.00 3.24
2547 2649 0.916086 TGGGCAATTACCATCCGTCT 59.084 50.000 0.00 0.00 31.83 4.18
2574 2676 1.346365 TTCTGCTGTCGAACGCATAC 58.654 50.000 9.93 0.00 35.32 2.39
2578 2680 1.951181 GCTGTCGAACGCATACGCAA 61.951 55.000 2.61 0.00 45.53 4.85
2608 2710 3.270027 CGTTGGGATGAAATAGCACAGA 58.730 45.455 0.00 0.00 0.00 3.41
2639 2741 1.963515 ACAAGGGCAGAAAATGGTCAC 59.036 47.619 0.00 0.00 0.00 3.67
2673 2775 1.455217 GGGCTGCAGCTCCATTGAT 60.455 57.895 35.82 0.00 41.70 2.57
2686 2790 4.574013 GCTCCATTGATGTGTCTTCCTAAG 59.426 45.833 0.00 0.00 0.00 2.18
2687 2791 5.627735 GCTCCATTGATGTGTCTTCCTAAGA 60.628 44.000 0.00 0.00 34.51 2.10
2724 2828 0.957395 CTGAAGCAGCGACCACCAAT 60.957 55.000 0.00 0.00 0.00 3.16
2730 2834 1.452110 CAGCGACCACCAATTGATCA 58.548 50.000 7.12 0.00 0.00 2.92
2737 2841 3.157087 ACCACCAATTGATCACAAGGTC 58.843 45.455 7.12 0.00 39.46 3.85
2749 2853 0.966920 ACAAGGTCGGACTGTCGATT 59.033 50.000 8.23 0.00 41.40 3.34
2763 2867 7.588854 CGGACTGTCGATTCGAAAATATACTTA 59.411 37.037 10.87 0.00 37.72 2.24
2781 2885 4.968259 ACTTATGCACAGGTGACTAACAA 58.032 39.130 3.10 0.00 40.21 2.83
2783 2887 1.577468 TGCACAGGTGACTAACAACG 58.423 50.000 3.10 0.00 41.74 4.10
2796 2900 6.418226 GTGACTAACAACGGTATCATCATCTC 59.582 42.308 0.00 0.00 0.00 2.75
2797 2901 5.520632 ACTAACAACGGTATCATCATCTCG 58.479 41.667 0.00 0.00 0.00 4.04
2954 3064 3.186909 TCTGCGTATGTATCTGTTGCAC 58.813 45.455 0.00 0.00 0.00 4.57
2988 3098 4.404394 TCCACTCACACTACAGAAACTTCA 59.596 41.667 0.00 0.00 0.00 3.02
3096 3221 4.014406 GGATTGGGAATTCGTTTACTGGT 58.986 43.478 0.00 0.00 0.00 4.00
3258 3383 4.610007 GCATAGCATTGCTCAGTGATTACG 60.610 45.833 15.81 0.00 40.44 3.18
3261 3386 2.905075 CATTGCTCAGTGATTACGGGA 58.095 47.619 0.00 0.00 0.00 5.14
3276 3401 0.392193 CGGGATGCAGAGAAAGTGCT 60.392 55.000 0.00 0.00 41.78 4.40
3393 3518 1.340991 TGGCTCCAAATAGGGTTGCTC 60.341 52.381 0.00 0.00 38.24 4.26
3579 3704 9.765795 AGCAGTGATAATAGTGTAAATTACTCC 57.234 33.333 4.67 0.00 0.00 3.85
3580 3705 8.989980 GCAGTGATAATAGTGTAAATTACTCCC 58.010 37.037 4.67 0.00 0.00 4.30
3583 3708 9.708092 GTGATAATAGTGTAAATTACTCCCTCC 57.292 37.037 4.67 0.00 0.00 4.30
3584 3709 9.442062 TGATAATAGTGTAAATTACTCCCTCCA 57.558 33.333 4.67 0.00 0.00 3.86
3588 3713 9.628500 AATAGTGTAAATTACTCCCTCCATTTC 57.372 33.333 4.67 0.00 0.00 2.17
3589 3714 7.272144 AGTGTAAATTACTCCCTCCATTTCT 57.728 36.000 4.67 0.00 0.00 2.52
3590 3715 8.388656 AGTGTAAATTACTCCCTCCATTTCTA 57.611 34.615 4.67 0.00 0.00 2.10
3591 3716 8.832735 AGTGTAAATTACTCCCTCCATTTCTAA 58.167 33.333 4.67 0.00 0.00 2.10
3592 3717 9.457436 GTGTAAATTACTCCCTCCATTTCTAAA 57.543 33.333 4.67 0.00 0.00 1.85
3600 3725 7.462590 ACTCCCTCCATTTCTAAATATAAGCC 58.537 38.462 0.00 0.00 0.00 4.35
3601 3726 7.295911 ACTCCCTCCATTTCTAAATATAAGCCT 59.704 37.037 0.00 0.00 0.00 4.58
3602 3727 8.057246 TCCCTCCATTTCTAAATATAAGCCTT 57.943 34.615 0.00 0.00 0.00 4.35
3603 3728 8.511126 TCCCTCCATTTCTAAATATAAGCCTTT 58.489 33.333 0.00 0.00 0.00 3.11
3604 3729 9.147732 CCCTCCATTTCTAAATATAAGCCTTTT 57.852 33.333 0.00 0.00 0.00 2.27
3622 3747 9.914131 AAGCCTTTTTAGAATTTCAATACAGAC 57.086 29.630 0.00 0.00 0.00 3.51
3623 3748 9.301897 AGCCTTTTTAGAATTTCAATACAGACT 57.698 29.630 0.00 0.00 0.00 3.24
3676 3801 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3677 3802 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3678 3803 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3679 3804 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3680 3805 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3681 3806 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3682 3807 6.582636 AGATTCACTCATTTTGCTCCGTATA 58.417 36.000 0.00 0.00 0.00 1.47
3683 3808 6.480320 AGATTCACTCATTTTGCTCCGTATAC 59.520 38.462 0.00 0.00 0.00 1.47
3684 3809 5.079689 TCACTCATTTTGCTCCGTATACA 57.920 39.130 3.32 0.00 0.00 2.29
3685 3810 5.670485 TCACTCATTTTGCTCCGTATACAT 58.330 37.500 3.32 0.00 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 7.549147 TGTTGGGTTCTACAAGTATCTTACT 57.451 36.000 0.00 0.00 41.73 2.24
65 66 6.068010 TGTATCTGATTGTTCTTGTTGGGTT 58.932 36.000 0.00 0.00 0.00 4.11
111 120 2.121291 TAAGCCATGTCATTTCCGCA 57.879 45.000 0.00 0.00 0.00 5.69
113 122 4.165779 GTGTTTAAGCCATGTCATTTCCG 58.834 43.478 0.00 0.00 0.00 4.30
121 130 4.136517 CGTTTACGTGTTTAAGCCATGT 57.863 40.909 0.00 7.11 36.15 3.21
180 189 3.871006 TGATGTGAGATAATTGGCACGAC 59.129 43.478 0.00 0.00 34.12 4.34
335 346 3.331150 TGGTACGTAGCAGATTTGGTTG 58.669 45.455 22.78 0.00 36.27 3.77
388 399 2.792890 CGGATGAAGTAGACGCTCTGTG 60.793 54.545 0.00 0.00 0.00 3.66
401 412 5.393962 GTTTCTGGTTTTGATCGGATGAAG 58.606 41.667 0.00 0.00 0.00 3.02
428 439 3.449322 TCGCAAATGCTTAGTTTCGTC 57.551 42.857 3.63 0.00 39.32 4.20
481 502 1.405463 GGGCCGATCCAAACTTGATTC 59.595 52.381 0.00 0.00 36.21 2.52
484 505 0.322456 CTGGGCCGATCCAAACTTGA 60.322 55.000 0.00 0.00 36.21 3.02
488 509 0.462759 CTCTCTGGGCCGATCCAAAC 60.463 60.000 0.00 0.00 36.21 2.93
1109 1211 3.760035 GGTGCGGGAAGAGCGAGA 61.760 66.667 0.00 0.00 37.44 4.04
1254 1356 3.157949 GGGGAGAAGGAGGGCGAG 61.158 72.222 0.00 0.00 0.00 5.03
1423 1525 3.423154 GAACCCGAACCGCAGCAG 61.423 66.667 0.00 0.00 0.00 4.24
1518 1620 3.474600 CCTCTCAGGCATTTCATCGAAT 58.525 45.455 0.00 0.00 0.00 3.34
1581 1683 1.513158 CGCACTGATCTCTCCGGTT 59.487 57.895 0.00 0.00 0.00 4.44
1582 1684 2.418910 CCGCACTGATCTCTCCGGT 61.419 63.158 0.00 0.00 0.00 5.28
1587 1689 3.071206 ACCGCCGCACTGATCTCT 61.071 61.111 0.00 0.00 0.00 3.10
1609 1711 1.672881 GCACATCATAGCCCTGAACAC 59.327 52.381 0.00 0.00 0.00 3.32
1617 1719 1.019673 CACCACAGCACATCATAGCC 58.980 55.000 0.00 0.00 0.00 3.93
1685 1787 1.222936 CCATGCACTGACTCCCCTC 59.777 63.158 0.00 0.00 0.00 4.30
1782 1884 2.682856 GACCTTCTTTGCGCATCCAATA 59.317 45.455 12.75 0.00 0.00 1.90
1791 1893 2.404215 TCTTCGAAGACCTTCTTTGCG 58.596 47.619 23.74 0.00 36.73 4.85
1869 1971 0.904394 TTGCCTCCTCAATTTGCCCC 60.904 55.000 0.00 0.00 0.00 5.80
2025 2127 0.590195 GTGCAGTGTCAAGCTCAAGG 59.410 55.000 0.00 0.00 0.00 3.61
2088 2190 0.392193 AGACTGCAATCGCCTCCTTG 60.392 55.000 0.00 0.00 37.32 3.61
2208 2310 0.950555 TGACACCGACTTGCTGCATC 60.951 55.000 1.84 0.00 0.00 3.91
2219 2321 1.162698 CTCGTTAGGAGTGACACCGA 58.837 55.000 0.84 2.18 38.02 4.69
2259 2361 0.248743 CGCCATGGCTACAAGCATTG 60.249 55.000 33.07 10.74 44.75 2.82
2340 2442 0.036388 AGCCATAGTGTTCGGTGTGG 60.036 55.000 0.00 0.00 0.00 4.17
2385 2487 2.546494 CGCTTCATCCAATCGCCCC 61.546 63.158 0.00 0.00 0.00 5.80
2439 2541 2.918712 AAGTTCTCCATCCCATAGCG 57.081 50.000 0.00 0.00 0.00 4.26
2574 2676 2.179018 CAACGGCCTTCCATTGCG 59.821 61.111 0.00 0.00 28.03 4.85
2578 2680 1.076777 CATCCCAACGGCCTTCCAT 60.077 57.895 0.00 0.00 0.00 3.41
2608 2710 1.002069 TGCCCTTGTGAATCCCTGAT 58.998 50.000 0.00 0.00 0.00 2.90
2639 2741 1.741770 CCCGCTTCTTTCCTGTCCG 60.742 63.158 0.00 0.00 0.00 4.79
2673 2775 8.696374 CAAGGTTAGATATCTTAGGAAGACACA 58.304 37.037 11.25 0.00 41.01 3.72
2686 2790 6.018343 GCTTCAGTTCAGCAAGGTTAGATATC 60.018 42.308 0.00 0.00 37.22 1.63
2687 2791 5.819901 GCTTCAGTTCAGCAAGGTTAGATAT 59.180 40.000 0.00 0.00 37.22 1.63
2713 2817 1.164411 TGTGATCAATTGGTGGTCGC 58.836 50.000 5.42 6.63 46.40 5.19
2724 2828 1.691976 ACAGTCCGACCTTGTGATCAA 59.308 47.619 0.00 0.00 0.00 2.57
2730 2834 0.966920 AATCGACAGTCCGACCTTGT 59.033 50.000 0.00 0.00 41.70 3.16
2737 2841 5.913514 AGTATATTTTCGAATCGACAGTCCG 59.086 40.000 4.25 0.00 34.89 4.79
2749 2853 7.223971 GTCACCTGTGCATAAGTATATTTTCGA 59.776 37.037 0.00 0.00 0.00 3.71
2763 2867 2.143122 CGTTGTTAGTCACCTGTGCAT 58.857 47.619 0.00 0.00 0.00 3.96
2781 2885 3.477530 TCAGTCGAGATGATGATACCGT 58.522 45.455 0.00 0.00 0.00 4.83
2783 2887 7.571026 CAAAAATCAGTCGAGATGATGATACC 58.429 38.462 12.53 0.00 37.46 2.73
2796 2900 3.486584 GCTCTTCAGCAAAAATCAGTCG 58.513 45.455 0.00 0.00 46.06 4.18
2898 3008 4.223923 ACTCCAATCTGTCTCCGAATCTTT 59.776 41.667 0.00 0.00 0.00 2.52
2954 3064 2.609459 GTGTGAGTGGAGTGTGTTTCTG 59.391 50.000 0.00 0.00 0.00 3.02
2988 3098 3.186119 CACAATTTGCTTCACCGTTTGT 58.814 40.909 0.00 0.00 0.00 2.83
3133 3258 2.354821 GGATTTCCAATAGTGTGACGCC 59.645 50.000 0.00 0.00 35.64 5.68
3135 3260 2.943033 GGGGATTTCCAATAGTGTGACG 59.057 50.000 0.00 0.00 37.91 4.35
3258 3383 1.093159 CAGCACTTTCTCTGCATCCC 58.907 55.000 0.00 0.00 37.08 3.85
3261 3386 1.001293 TCGACAGCACTTTCTCTGCAT 59.999 47.619 0.00 0.00 37.08 3.96
3276 3401 0.603065 CACCAGTCATCACCTCGACA 59.397 55.000 0.00 0.00 34.48 4.35
3578 3703 8.712228 AAAGGCTTATATTTAGAAATGGAGGG 57.288 34.615 0.00 0.00 0.00 4.30
3596 3721 9.914131 GTCTGTATTGAAATTCTAAAAAGGCTT 57.086 29.630 0.00 0.00 0.00 4.35
3597 3722 9.301897 AGTCTGTATTGAAATTCTAAAAAGGCT 57.698 29.630 0.00 0.00 0.00 4.58
3640 3765 8.958506 AGTGAATCTACACTCTAAAATACGTCT 58.041 33.333 0.00 0.00 46.36 4.18
3654 3779 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3655 3780 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3656 3781 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3657 3782 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3658 3783 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3659 3784 5.741388 ATACGGAGCAAAATGAGTGAATC 57.259 39.130 0.00 0.00 0.00 2.52
3660 3785 6.112734 TGTATACGGAGCAAAATGAGTGAAT 58.887 36.000 0.00 0.00 0.00 2.57
3661 3786 5.483811 TGTATACGGAGCAAAATGAGTGAA 58.516 37.500 0.00 0.00 0.00 3.18
3662 3787 5.079689 TGTATACGGAGCAAAATGAGTGA 57.920 39.130 0.00 0.00 0.00 3.41
3663 3788 5.991328 ATGTATACGGAGCAAAATGAGTG 57.009 39.130 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.