Multiple sequence alignment - TraesCS2A01G156700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G156700 chr2A 100.000 3126 0 0 1 3126 103238555 103241680 0.000000e+00 5773.0
1 TraesCS2A01G156700 chr2A 95.000 40 2 0 10 49 483941474 483941435 2.600000e-06 63.9
2 TraesCS2A01G156700 chr2D 92.411 1344 58 20 98 1407 106959822 106961155 0.000000e+00 1877.0
3 TraesCS2A01G156700 chr2D 91.496 682 36 13 1582 2258 106961396 106962060 0.000000e+00 918.0
4 TraesCS2A01G156700 chr2D 96.354 192 4 1 1411 1599 106961193 106961384 2.340000e-81 313.0
5 TraesCS2A01G156700 chr2D 94.819 193 9 1 2934 3125 182381638 182381446 1.820000e-77 300.0
6 TraesCS2A01G156700 chr2B 90.630 1334 76 21 99 1407 157264596 157265905 0.000000e+00 1725.0
7 TraesCS2A01G156700 chr2B 92.203 808 26 20 1411 2207 157265948 157266729 0.000000e+00 1109.0
8 TraesCS2A01G156700 chr2B 87.982 649 62 13 2257 2898 490790457 490791096 0.000000e+00 752.0
9 TraesCS2A01G156700 chr2B 96.891 193 5 1 2934 3125 209834686 209834878 3.890000e-84 322.0
10 TraesCS2A01G156700 chr6B 88.940 651 51 16 2257 2898 106470508 106471146 0.000000e+00 784.0
11 TraesCS2A01G156700 chr6B 88.906 649 55 14 2259 2898 172987059 172987699 0.000000e+00 784.0
12 TraesCS2A01G156700 chr6A 88.992 645 54 13 2259 2898 49764780 49764148 0.000000e+00 782.0
13 TraesCS2A01G156700 chr6A 93.548 155 8 2 2745 2898 235487950 235487797 2.420000e-56 230.0
14 TraesCS2A01G156700 chr6A 97.368 38 1 0 13 50 410871550 410871513 7.240000e-07 65.8
15 TraesCS2A01G156700 chr5B 88.580 648 53 16 2259 2898 696488181 696487547 0.000000e+00 767.0
16 TraesCS2A01G156700 chr3A 88.545 646 55 15 2260 2898 726545762 726546395 0.000000e+00 765.0
17 TraesCS2A01G156700 chr7A 88.272 648 58 14 2259 2898 49898273 49898910 0.000000e+00 760.0
18 TraesCS2A01G156700 chr4A 88.136 649 57 16 2258 2898 641825141 641825777 0.000000e+00 754.0
19 TraesCS2A01G156700 chr3B 87.982 649 58 16 2258 2898 798687354 798687990 0.000000e+00 749.0
20 TraesCS2A01G156700 chr3B 92.308 39 2 1 21 59 417053390 417053353 2.000000e-03 54.7
21 TraesCS2A01G156700 chr6D 97.396 192 5 0 2934 3125 76061512 76061321 8.360000e-86 327.0
22 TraesCS2A01G156700 chr6D 96.875 192 6 0 2934 3125 76058872 76058681 3.890000e-84 322.0
23 TraesCS2A01G156700 chr6D 95.455 198 7 2 2929 3125 379708133 379707937 6.510000e-82 315.0
24 TraesCS2A01G156700 chr6D 100.000 32 0 0 19 50 93323875 93323844 3.370000e-05 60.2
25 TraesCS2A01G156700 chr6D 100.000 32 0 0 18 49 104452827 104452796 3.370000e-05 60.2
26 TraesCS2A01G156700 chr6D 100.000 31 0 0 19 49 140095093 140095063 1.210000e-04 58.4
27 TraesCS2A01G156700 chr6D 100.000 29 0 0 19 47 455885332 455885360 2.000000e-03 54.7
28 TraesCS2A01G156700 chr1D 96.891 193 5 1 2934 3125 300706301 300706493 3.890000e-84 322.0
29 TraesCS2A01G156700 chr1D 96.891 193 5 1 2934 3125 415184588 415184780 3.890000e-84 322.0
30 TraesCS2A01G156700 chr1D 100.000 31 0 0 19 49 29899393 29899423 1.210000e-04 58.4
31 TraesCS2A01G156700 chr1D 97.059 34 1 0 19 52 259768845 259768812 1.210000e-04 58.4
32 TraesCS2A01G156700 chr1D 100.000 29 0 0 19 47 16265581 16265609 2.000000e-03 54.7
33 TraesCS2A01G156700 chr1D 100.000 28 0 0 21 48 315380893 315380920 6.000000e-03 52.8
34 TraesCS2A01G156700 chr1B 96.891 193 5 1 2934 3125 41700977 41700785 3.890000e-84 322.0
35 TraesCS2A01G156700 chr1B 100.000 33 0 0 19 51 452309541 452309509 9.360000e-06 62.1
36 TraesCS2A01G156700 chr1B 100.000 32 0 0 19 50 645904536 645904505 3.370000e-05 60.2
37 TraesCS2A01G156700 chr1B 100.000 32 0 0 19 50 648995750 648995719 3.370000e-05 60.2
38 TraesCS2A01G156700 chr4D 93.810 210 8 4 2919 3125 220246568 220246361 8.420000e-81 311.0
39 TraesCS2A01G156700 chr4D 100.000 32 0 0 19 50 379946927 379946958 3.370000e-05 60.2
40 TraesCS2A01G156700 chr4D 97.059 34 1 0 19 52 321793886 321793853 1.210000e-04 58.4
41 TraesCS2A01G156700 chr4D 100.000 30 0 0 21 50 483409304 483409275 4.360000e-04 56.5
42 TraesCS2A01G156700 chr3D 95.337 193 8 1 2934 3125 69505590 69505398 3.920000e-79 305.0
43 TraesCS2A01G156700 chr3D 92.558 215 13 3 2912 3125 610096570 610096782 3.920000e-79 305.0
44 TraesCS2A01G156700 chr7D 94.845 194 8 2 2934 3125 473402886 473402693 5.070000e-78 302.0
45 TraesCS2A01G156700 chr7D 100.000 42 0 0 2899 2940 71209009 71209050 9.290000e-11 78.7
46 TraesCS2A01G156700 chr5A 94.819 193 9 1 2934 3125 62961664 62961472 1.820000e-77 300.0
47 TraesCS2A01G156700 chr5A 100.000 32 0 0 19 50 631476505 631476536 3.370000e-05 60.2
48 TraesCS2A01G156700 chr1A 91.628 215 15 3 2912 3125 589876968 589877180 8.480000e-76 294.0
49 TraesCS2A01G156700 chr4B 90.265 226 16 6 2902 3125 460785622 460785843 1.100000e-74 291.0
50 TraesCS2A01G156700 chr5D 92.857 154 10 1 2746 2898 544136448 544136601 4.060000e-54 222.0
51 TraesCS2A01G156700 chr5D 100.000 32 0 0 19 50 3616467 3616436 3.370000e-05 60.2
52 TraesCS2A01G156700 chr5D 96.970 33 0 1 21 53 40482063 40482032 2.000000e-03 54.7
53 TraesCS2A01G156700 chr7B 97.297 37 1 0 18 54 413253134 413253098 2.600000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G156700 chr2A 103238555 103241680 3125 False 5773.0 5773 100.000000 1 3126 1 chr2A.!!$F1 3125
1 TraesCS2A01G156700 chr2D 106959822 106962060 2238 False 1036.0 1877 93.420333 98 2258 3 chr2D.!!$F1 2160
2 TraesCS2A01G156700 chr2B 157264596 157266729 2133 False 1417.0 1725 91.416500 99 2207 2 chr2B.!!$F3 2108
3 TraesCS2A01G156700 chr2B 490790457 490791096 639 False 752.0 752 87.982000 2257 2898 1 chr2B.!!$F2 641
4 TraesCS2A01G156700 chr6B 106470508 106471146 638 False 784.0 784 88.940000 2257 2898 1 chr6B.!!$F1 641
5 TraesCS2A01G156700 chr6B 172987059 172987699 640 False 784.0 784 88.906000 2259 2898 1 chr6B.!!$F2 639
6 TraesCS2A01G156700 chr6A 49764148 49764780 632 True 782.0 782 88.992000 2259 2898 1 chr6A.!!$R1 639
7 TraesCS2A01G156700 chr5B 696487547 696488181 634 True 767.0 767 88.580000 2259 2898 1 chr5B.!!$R1 639
8 TraesCS2A01G156700 chr3A 726545762 726546395 633 False 765.0 765 88.545000 2260 2898 1 chr3A.!!$F1 638
9 TraesCS2A01G156700 chr7A 49898273 49898910 637 False 760.0 760 88.272000 2259 2898 1 chr7A.!!$F1 639
10 TraesCS2A01G156700 chr4A 641825141 641825777 636 False 754.0 754 88.136000 2258 2898 1 chr4A.!!$F1 640
11 TraesCS2A01G156700 chr3B 798687354 798687990 636 False 749.0 749 87.982000 2258 2898 1 chr3B.!!$F1 640
12 TraesCS2A01G156700 chr6D 76058681 76061512 2831 True 324.5 327 97.135500 2934 3125 2 chr6D.!!$R5 191

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
190 191 0.106569 TGAATCAATCATGGCCGGCT 60.107 50.0 28.56 3.74 31.50 5.52 F
544 548 0.243365 AGCCATCATCTCGATCGAGC 59.757 55.0 34.92 24.01 41.71 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1173 1206 0.109723 CCTCCTGACCGGAAAAACCA 59.890 55.0 9.46 0.0 42.53 3.67 R
2486 2618 0.105039 GATCATGGAGACCGACCACC 59.895 60.0 0.00 0.0 40.36 4.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.668497 AATCTATTCAAACACCCTCTAAGTTAC 57.332 33.333 0.00 0.00 0.00 2.50
28 29 8.431910 TCTATTCAAACACCCTCTAAGTTACT 57.568 34.615 0.00 0.00 0.00 2.24
29 30 8.877195 TCTATTCAAACACCCTCTAAGTTACTT 58.123 33.333 2.32 2.32 0.00 2.24
30 31 7.981102 ATTCAAACACCCTCTAAGTTACTTC 57.019 36.000 0.00 0.00 0.00 3.01
31 32 5.861727 TCAAACACCCTCTAAGTTACTTCC 58.138 41.667 0.00 0.00 0.00 3.46
32 33 4.904895 AACACCCTCTAAGTTACTTCCC 57.095 45.455 0.00 0.00 0.00 3.97
33 34 3.865571 ACACCCTCTAAGTTACTTCCCA 58.134 45.455 0.00 0.00 0.00 4.37
34 35 3.581770 ACACCCTCTAAGTTACTTCCCAC 59.418 47.826 0.00 0.00 0.00 4.61
35 36 3.838903 CACCCTCTAAGTTACTTCCCACT 59.161 47.826 0.00 0.00 0.00 4.00
36 37 5.021458 CACCCTCTAAGTTACTTCCCACTA 58.979 45.833 0.00 0.00 0.00 2.74
37 38 5.661759 CACCCTCTAAGTTACTTCCCACTAT 59.338 44.000 0.00 0.00 0.00 2.12
38 39 5.661759 ACCCTCTAAGTTACTTCCCACTATG 59.338 44.000 0.00 0.00 0.00 2.23
39 40 5.897824 CCCTCTAAGTTACTTCCCACTATGA 59.102 44.000 0.00 0.00 0.00 2.15
40 41 6.183360 CCCTCTAAGTTACTTCCCACTATGAC 60.183 46.154 0.00 0.00 0.00 3.06
41 42 6.183360 CCTCTAAGTTACTTCCCACTATGACC 60.183 46.154 0.00 0.00 0.00 4.02
42 43 6.258354 TCTAAGTTACTTCCCACTATGACCA 58.742 40.000 0.00 0.00 0.00 4.02
43 44 5.422214 AAGTTACTTCCCACTATGACCAG 57.578 43.478 0.00 0.00 0.00 4.00
44 45 3.197983 AGTTACTTCCCACTATGACCAGC 59.802 47.826 0.00 0.00 0.00 4.85
45 46 0.912486 ACTTCCCACTATGACCAGCC 59.088 55.000 0.00 0.00 0.00 4.85
46 47 1.207791 CTTCCCACTATGACCAGCCT 58.792 55.000 0.00 0.00 0.00 4.58
47 48 1.561542 CTTCCCACTATGACCAGCCTT 59.438 52.381 0.00 0.00 0.00 4.35
48 49 2.561209 TCCCACTATGACCAGCCTTA 57.439 50.000 0.00 0.00 0.00 2.69
49 50 2.398588 TCCCACTATGACCAGCCTTAG 58.601 52.381 0.00 0.00 0.00 2.18
50 51 1.417890 CCCACTATGACCAGCCTTAGG 59.582 57.143 0.00 0.00 0.00 2.69
61 62 3.827505 GCCTTAGGCCATCAATCCA 57.172 52.632 13.12 0.00 44.06 3.41
62 63 1.322442 GCCTTAGGCCATCAATCCAC 58.678 55.000 13.12 0.00 44.06 4.02
63 64 1.133668 GCCTTAGGCCATCAATCCACT 60.134 52.381 13.12 0.00 44.06 4.00
64 65 2.687914 GCCTTAGGCCATCAATCCACTT 60.688 50.000 13.12 0.00 44.06 3.16
65 66 3.635591 CCTTAGGCCATCAATCCACTTT 58.364 45.455 5.01 0.00 0.00 2.66
66 67 3.382546 CCTTAGGCCATCAATCCACTTTG 59.617 47.826 5.01 0.00 0.00 2.77
67 68 2.905415 AGGCCATCAATCCACTTTGA 57.095 45.000 5.01 0.00 39.77 2.69
68 69 3.173953 AGGCCATCAATCCACTTTGAA 57.826 42.857 5.01 0.00 38.98 2.69
69 70 3.509442 AGGCCATCAATCCACTTTGAAA 58.491 40.909 5.01 0.00 38.98 2.69
70 71 3.903090 AGGCCATCAATCCACTTTGAAAA 59.097 39.130 5.01 0.00 38.98 2.29
71 72 3.996363 GGCCATCAATCCACTTTGAAAAC 59.004 43.478 0.00 0.00 38.98 2.43
72 73 3.996363 GCCATCAATCCACTTTGAAAACC 59.004 43.478 0.00 0.00 38.98 3.27
73 74 4.262592 GCCATCAATCCACTTTGAAAACCT 60.263 41.667 0.00 0.00 38.98 3.50
74 75 5.473039 CCATCAATCCACTTTGAAAACCTC 58.527 41.667 0.00 0.00 38.98 3.85
75 76 5.010922 CCATCAATCCACTTTGAAAACCTCA 59.989 40.000 0.00 0.00 38.98 3.86
76 77 6.462768 CCATCAATCCACTTTGAAAACCTCAA 60.463 38.462 0.00 0.00 42.48 3.02
77 78 6.729690 TCAATCCACTTTGAAAACCTCAAT 57.270 33.333 0.00 0.00 43.64 2.57
78 79 6.514947 TCAATCCACTTTGAAAACCTCAATG 58.485 36.000 0.00 0.00 43.64 2.82
80 81 5.514274 TCCACTTTGAAAACCTCAATGTC 57.486 39.130 3.74 0.00 44.84 3.06
81 82 4.952957 TCCACTTTGAAAACCTCAATGTCA 59.047 37.500 3.74 0.00 44.84 3.58
82 83 5.598005 TCCACTTTGAAAACCTCAATGTCAT 59.402 36.000 3.74 0.00 44.84 3.06
83 84 6.775142 TCCACTTTGAAAACCTCAATGTCATA 59.225 34.615 3.74 0.00 44.84 2.15
84 85 7.286546 TCCACTTTGAAAACCTCAATGTCATAA 59.713 33.333 3.74 0.00 44.84 1.90
85 86 7.925483 CCACTTTGAAAACCTCAATGTCATAAA 59.075 33.333 3.74 0.00 44.84 1.40
86 87 9.480053 CACTTTGAAAACCTCAATGTCATAAAT 57.520 29.630 3.74 0.00 44.84 1.40
87 88 9.480053 ACTTTGAAAACCTCAATGTCATAAATG 57.520 29.630 1.41 0.00 44.84 2.32
88 89 7.887996 TTGAAAACCTCAATGTCATAAATGC 57.112 32.000 0.00 0.00 39.20 3.56
89 90 6.990798 TGAAAACCTCAATGTCATAAATGCA 58.009 32.000 0.00 0.00 0.00 3.96
90 91 6.867816 TGAAAACCTCAATGTCATAAATGCAC 59.132 34.615 0.00 0.00 0.00 4.57
91 92 4.989279 ACCTCAATGTCATAAATGCACC 57.011 40.909 0.00 0.00 0.00 5.01
92 93 4.603131 ACCTCAATGTCATAAATGCACCT 58.397 39.130 0.00 0.00 0.00 4.00
93 94 5.754782 ACCTCAATGTCATAAATGCACCTA 58.245 37.500 0.00 0.00 0.00 3.08
94 95 5.590259 ACCTCAATGTCATAAATGCACCTAC 59.410 40.000 0.00 0.00 0.00 3.18
95 96 5.824624 CCTCAATGTCATAAATGCACCTACT 59.175 40.000 0.00 0.00 0.00 2.57
96 97 6.238566 CCTCAATGTCATAAATGCACCTACTG 60.239 42.308 0.00 0.00 0.00 2.74
101 102 4.034048 GTCATAAATGCACCTACTGAACGG 59.966 45.833 0.00 0.00 0.00 4.44
137 138 2.952714 AGCCTTGCTGTGATGAACC 58.047 52.632 0.00 0.00 37.57 3.62
164 165 2.333069 TCTAGCTCCCTCCCATGAATG 58.667 52.381 0.00 0.00 0.00 2.67
168 169 2.158505 AGCTCCCTCCCATGAATGAATG 60.159 50.000 0.00 0.00 0.00 2.67
169 170 2.158564 GCTCCCTCCCATGAATGAATGA 60.159 50.000 0.00 0.00 0.00 2.57
170 171 3.689280 GCTCCCTCCCATGAATGAATGAA 60.689 47.826 0.00 0.00 0.00 2.57
171 172 4.737578 CTCCCTCCCATGAATGAATGAAT 58.262 43.478 0.00 0.00 0.00 2.57
172 173 4.476297 TCCCTCCCATGAATGAATGAATG 58.524 43.478 0.00 0.00 0.00 2.67
190 191 0.106569 TGAATCAATCATGGCCGGCT 60.107 50.000 28.56 3.74 31.50 5.52
202 203 2.819595 CCGGCTCACGTCCCAATG 60.820 66.667 0.00 0.00 42.24 2.82
300 304 2.287788 CCACTTGCCACATGTTTCAGTC 60.288 50.000 0.00 0.00 0.00 3.51
351 355 1.004927 CGGTAGAGCAAATTAGCACGC 60.005 52.381 0.00 0.00 36.85 5.34
412 416 4.970662 AGTGCAAATTAACTCGCATCAT 57.029 36.364 0.00 0.00 36.64 2.45
417 421 4.736793 GCAAATTAACTCGCATCATCTTGG 59.263 41.667 0.00 0.00 0.00 3.61
421 425 6.851222 ATTAACTCGCATCATCTTGGTTAG 57.149 37.500 0.00 0.00 0.00 2.34
422 426 3.895232 ACTCGCATCATCTTGGTTAGT 57.105 42.857 0.00 0.00 0.00 2.24
423 427 3.525537 ACTCGCATCATCTTGGTTAGTG 58.474 45.455 0.00 0.00 0.00 2.74
424 428 2.868583 CTCGCATCATCTTGGTTAGTGG 59.131 50.000 0.00 0.00 0.00 4.00
425 429 2.236146 TCGCATCATCTTGGTTAGTGGT 59.764 45.455 0.00 0.00 0.00 4.16
543 547 1.538950 TCAGCCATCATCTCGATCGAG 59.461 52.381 34.20 34.20 43.21 4.04
544 548 0.243365 AGCCATCATCTCGATCGAGC 59.757 55.000 34.92 24.01 41.71 5.03
594 602 3.986006 GACAGCGACGACCACCCA 61.986 66.667 0.00 0.00 0.00 4.51
634 642 3.459232 TGCCAAACTCGAGAGGATATG 57.541 47.619 21.68 7.99 0.00 1.78
636 644 2.548920 GCCAAACTCGAGAGGATATGGG 60.549 54.545 21.68 9.46 0.00 4.00
751 759 0.606604 TAGCCCGAGACTTTTCGCTT 59.393 50.000 0.00 0.00 39.19 4.68
752 760 0.606604 AGCCCGAGACTTTTCGCTTA 59.393 50.000 0.00 0.00 39.19 3.09
753 761 1.207329 AGCCCGAGACTTTTCGCTTAT 59.793 47.619 0.00 0.00 39.19 1.73
883 912 1.214062 GTGCGTCTCTCTCACCCAG 59.786 63.158 0.00 0.00 0.00 4.45
940 969 1.375523 GGGCAGGAACGAACGTCAT 60.376 57.895 0.00 0.00 0.00 3.06
984 1013 1.306739 GCTATATAGCCCCGGGGGT 60.307 63.158 43.90 43.90 46.51 4.95
996 1025 2.269241 GGGGGTACTGCTGCACTC 59.731 66.667 0.00 0.00 0.00 3.51
1011 1040 4.544689 CTCGCTGCTCGGAGTCGG 62.545 72.222 6.90 5.51 39.05 4.79
1015 1044 4.544689 CTGCTCGGAGTCGGCGAG 62.545 72.222 11.20 12.77 36.07 5.03
1163 1196 1.550524 CCACCTCAAGAACCTCATCGA 59.449 52.381 0.00 0.00 0.00 3.59
1173 1206 0.323542 ACCTCATCGACTTCTCCGGT 60.324 55.000 0.00 0.00 0.00 5.28
1174 1207 0.101399 CCTCATCGACTTCTCCGGTG 59.899 60.000 0.00 0.00 39.31 4.94
1212 1246 0.951040 CCGCTTGGAGGTGTGAACTC 60.951 60.000 0.00 0.00 33.02 3.01
1265 1299 0.761187 GGAGCTACAGGATGATGGCA 59.239 55.000 0.00 0.00 39.69 4.92
1313 1347 2.465813 AGAGGTGATTCAGGAGAGGTG 58.534 52.381 0.00 0.00 0.00 4.00
1407 1446 1.634702 GCTGTTCTCGATCGCTTCTT 58.365 50.000 11.09 0.00 0.00 2.52
1409 1448 2.868662 CTGTTCTCGATCGCTTCTTGA 58.131 47.619 11.09 0.00 0.00 3.02
1431 1509 0.613777 ATGAGTCTGGGGGAAACGAC 59.386 55.000 0.00 0.00 0.00 4.34
1698 1826 3.541632 ACTATGTATTTGGGTTCAGGCG 58.458 45.455 0.00 0.00 0.00 5.52
1701 1829 2.639065 TGTATTTGGGTTCAGGCGATC 58.361 47.619 0.00 0.00 0.00 3.69
1720 1849 1.757118 TCTACTGCTCCCGGATCAAAG 59.243 52.381 0.73 0.00 0.00 2.77
1743 1872 6.874288 GCTCTTGCTAGGTAATCAATGAAT 57.126 37.500 0.00 0.00 36.03 2.57
1744 1873 6.896969 GCTCTTGCTAGGTAATCAATGAATC 58.103 40.000 0.00 0.00 36.03 2.52
1745 1874 6.484643 GCTCTTGCTAGGTAATCAATGAATCA 59.515 38.462 0.00 0.00 36.03 2.57
1746 1875 7.012704 GCTCTTGCTAGGTAATCAATGAATCAA 59.987 37.037 0.00 0.00 36.03 2.57
1792 1921 2.093341 GGTCAAAATGATGCAGGGCAAT 60.093 45.455 0.00 0.00 43.62 3.56
1927 2056 2.503331 TGATCGTGCCATGTCAAAGTT 58.497 42.857 0.00 0.00 0.00 2.66
1964 2093 3.428999 GCCCAGACGCACGTCATATATAT 60.429 47.826 23.59 0.00 46.76 0.86
1965 2094 4.201980 GCCCAGACGCACGTCATATATATA 60.202 45.833 23.59 0.00 46.76 0.86
2172 2302 5.026121 TGAAGAGATGTCCCTGATACAAGT 58.974 41.667 0.00 0.00 0.00 3.16
2201 2331 3.855858 AGTTTTCGCAACCAAAACATGT 58.144 36.364 10.78 0.00 43.40 3.21
2207 2337 1.130955 CAACCAAAACATGTCAGCGC 58.869 50.000 0.00 0.00 0.00 5.92
2210 2340 1.269206 ACCAAAACATGTCAGCGCTTG 60.269 47.619 7.50 6.15 0.00 4.01
2230 2360 3.411446 TGCTCCTGACAAAAATCGACAT 58.589 40.909 0.00 0.00 0.00 3.06
2236 2366 7.201609 GCTCCTGACAAAAATCGACATAACATA 60.202 37.037 0.00 0.00 0.00 2.29
2401 2533 6.894339 AATAACGAATTATTCCACCATCCC 57.106 37.500 0.00 0.00 36.45 3.85
2402 2534 4.519906 AACGAATTATTCCACCATCCCT 57.480 40.909 0.00 0.00 0.00 4.20
2403 2535 4.086706 ACGAATTATTCCACCATCCCTC 57.913 45.455 0.00 0.00 0.00 4.30
2404 2536 3.716872 ACGAATTATTCCACCATCCCTCT 59.283 43.478 0.00 0.00 0.00 3.69
2405 2537 4.166144 ACGAATTATTCCACCATCCCTCTT 59.834 41.667 0.00 0.00 0.00 2.85
2406 2538 5.133221 CGAATTATTCCACCATCCCTCTTT 58.867 41.667 0.00 0.00 0.00 2.52
2407 2539 5.239525 CGAATTATTCCACCATCCCTCTTTC 59.760 44.000 0.00 0.00 0.00 2.62
2408 2540 4.519906 TTATTCCACCATCCCTCTTTCC 57.480 45.455 0.00 0.00 0.00 3.13
2409 2541 0.999712 TTCCACCATCCCTCTTTCCC 59.000 55.000 0.00 0.00 0.00 3.97
2410 2542 0.121197 TCCACCATCCCTCTTTCCCT 59.879 55.000 0.00 0.00 0.00 4.20
2411 2543 1.002857 CCACCATCCCTCTTTCCCTT 58.997 55.000 0.00 0.00 0.00 3.95
2412 2544 1.064389 CCACCATCCCTCTTTCCCTTC 60.064 57.143 0.00 0.00 0.00 3.46
2413 2545 1.918957 CACCATCCCTCTTTCCCTTCT 59.081 52.381 0.00 0.00 0.00 2.85
2414 2546 3.115390 CACCATCCCTCTTTCCCTTCTA 58.885 50.000 0.00 0.00 0.00 2.10
2415 2547 3.523564 CACCATCCCTCTTTCCCTTCTAA 59.476 47.826 0.00 0.00 0.00 2.10
2416 2548 3.523972 ACCATCCCTCTTTCCCTTCTAAC 59.476 47.826 0.00 0.00 0.00 2.34
2417 2549 3.523564 CCATCCCTCTTTCCCTTCTAACA 59.476 47.826 0.00 0.00 0.00 2.41
2418 2550 4.166919 CCATCCCTCTTTCCCTTCTAACAT 59.833 45.833 0.00 0.00 0.00 2.71
2419 2551 4.844349 TCCCTCTTTCCCTTCTAACATG 57.156 45.455 0.00 0.00 0.00 3.21
2420 2552 4.435137 TCCCTCTTTCCCTTCTAACATGA 58.565 43.478 0.00 0.00 0.00 3.07
2421 2553 5.039645 TCCCTCTTTCCCTTCTAACATGAT 58.960 41.667 0.00 0.00 0.00 2.45
2422 2554 6.209774 TCCCTCTTTCCCTTCTAACATGATA 58.790 40.000 0.00 0.00 0.00 2.15
2423 2555 6.851836 TCCCTCTTTCCCTTCTAACATGATAT 59.148 38.462 0.00 0.00 0.00 1.63
2424 2556 7.016661 TCCCTCTTTCCCTTCTAACATGATATC 59.983 40.741 0.00 0.00 0.00 1.63
2425 2557 7.017056 CCCTCTTTCCCTTCTAACATGATATCT 59.983 40.741 0.00 0.00 0.00 1.98
2426 2558 9.094578 CCTCTTTCCCTTCTAACATGATATCTA 57.905 37.037 0.00 0.00 0.00 1.98
2429 2561 9.579768 CTTTCCCTTCTAACATGATATCTATCG 57.420 37.037 0.00 0.00 35.48 2.92
2430 2562 7.101652 TCCCTTCTAACATGATATCTATCGC 57.898 40.000 0.00 0.00 35.48 4.58
2431 2563 6.663523 TCCCTTCTAACATGATATCTATCGCA 59.336 38.462 0.00 0.00 35.48 5.10
2432 2564 7.178451 TCCCTTCTAACATGATATCTATCGCAA 59.822 37.037 0.00 0.00 35.48 4.85
2433 2565 7.490725 CCCTTCTAACATGATATCTATCGCAAG 59.509 40.741 0.00 0.00 35.48 4.01
2434 2566 8.031864 CCTTCTAACATGATATCTATCGCAAGT 58.968 37.037 0.00 0.00 35.48 3.16
2435 2567 8.972262 TTCTAACATGATATCTATCGCAAGTC 57.028 34.615 0.00 0.00 35.48 3.01
2436 2568 7.244192 TCTAACATGATATCTATCGCAAGTCG 58.756 38.462 0.00 0.00 35.48 4.18
2447 2579 2.613691 TCGCAAGTCGATTCTAAACCC 58.386 47.619 0.00 0.00 43.16 4.11
2448 2580 2.232941 TCGCAAGTCGATTCTAAACCCT 59.767 45.455 0.00 0.00 43.16 4.34
2449 2581 3.444742 TCGCAAGTCGATTCTAAACCCTA 59.555 43.478 0.00 0.00 43.16 3.53
2450 2582 3.797256 CGCAAGTCGATTCTAAACCCTAG 59.203 47.826 0.00 0.00 41.67 3.02
2451 2583 3.556365 GCAAGTCGATTCTAAACCCTAGC 59.444 47.826 0.00 0.00 0.00 3.42
2452 2584 4.120589 CAAGTCGATTCTAAACCCTAGCC 58.879 47.826 0.00 0.00 0.00 3.93
2453 2585 2.361438 AGTCGATTCTAAACCCTAGCCG 59.639 50.000 0.00 0.00 0.00 5.52
2454 2586 1.068127 TCGATTCTAAACCCTAGCCGC 59.932 52.381 0.00 0.00 0.00 6.53
2455 2587 1.872653 CGATTCTAAACCCTAGCCGCC 60.873 57.143 0.00 0.00 0.00 6.13
2456 2588 0.106149 ATTCTAAACCCTAGCCGCCG 59.894 55.000 0.00 0.00 0.00 6.46
2457 2589 2.582734 TTCTAAACCCTAGCCGCCGC 62.583 60.000 0.00 0.00 0.00 6.53
2458 2590 4.165486 TAAACCCTAGCCGCCGCC 62.165 66.667 0.00 0.00 34.57 6.13
2501 2633 2.687566 GGGGTGGTCGGTCTCCAT 60.688 66.667 0.00 0.00 37.30 3.41
2502 2634 2.584608 GGGTGGTCGGTCTCCATG 59.415 66.667 0.00 0.00 37.30 3.66
2503 2635 1.987855 GGGTGGTCGGTCTCCATGA 60.988 63.158 0.00 0.00 37.30 3.07
2504 2636 1.338136 GGGTGGTCGGTCTCCATGAT 61.338 60.000 0.00 0.00 37.30 2.45
2505 2637 0.105039 GGTGGTCGGTCTCCATGATC 59.895 60.000 0.00 0.00 37.30 2.92
2509 2641 2.355126 CGGTCTCCATGATCGCCG 60.355 66.667 0.00 0.00 42.69 6.46
2510 2642 2.663188 GGTCTCCATGATCGCCGC 60.663 66.667 0.00 0.00 0.00 6.53
2511 2643 2.663188 GTCTCCATGATCGCCGCC 60.663 66.667 0.00 0.00 0.00 6.13
2512 2644 4.284860 TCTCCATGATCGCCGCCG 62.285 66.667 0.00 0.00 0.00 6.46
2544 2676 0.538584 CCCGTACCTAGGGTTTGTCC 59.461 60.000 14.81 0.00 43.89 4.02
2545 2677 0.174162 CCGTACCTAGGGTTTGTCCG 59.826 60.000 14.81 4.08 37.09 4.79
2546 2678 0.890683 CGTACCTAGGGTTTGTCCGT 59.109 55.000 14.81 0.00 37.09 4.69
2547 2679 1.135286 CGTACCTAGGGTTTGTCCGTC 60.135 57.143 14.81 0.00 37.09 4.79
2548 2680 1.135286 GTACCTAGGGTTTGTCCGTCG 60.135 57.143 14.81 0.00 37.09 5.12
2549 2681 1.217244 CCTAGGGTTTGTCCGTCGG 59.783 63.158 4.39 4.39 37.00 4.79
2550 2682 1.447314 CTAGGGTTTGTCCGTCGGC 60.447 63.158 6.34 2.31 37.00 5.54
2551 2683 2.847435 CTAGGGTTTGTCCGTCGGCC 62.847 65.000 6.34 0.78 37.00 6.13
2553 2685 4.974989 GGTTTGTCCGTCGGCCGT 62.975 66.667 27.15 0.00 33.66 5.68
2554 2686 3.708734 GTTTGTCCGTCGGCCGTG 61.709 66.667 27.15 18.77 33.66 4.94
2555 2687 4.224274 TTTGTCCGTCGGCCGTGT 62.224 61.111 27.15 0.00 33.66 4.49
2556 2688 3.736732 TTTGTCCGTCGGCCGTGTT 62.737 57.895 27.15 0.00 33.66 3.32
2557 2689 4.953868 TGTCCGTCGGCCGTGTTG 62.954 66.667 27.15 13.06 33.66 3.33
2575 2707 2.514824 GCCGGCTGCCCTAAAGAG 60.515 66.667 22.15 0.00 0.00 2.85
2576 2708 2.990479 CCGGCTGCCCTAAAGAGT 59.010 61.111 14.12 0.00 0.00 3.24
2577 2709 1.153349 CCGGCTGCCCTAAAGAGTC 60.153 63.158 14.12 0.00 0.00 3.36
2578 2710 1.617947 CCGGCTGCCCTAAAGAGTCT 61.618 60.000 14.12 0.00 0.00 3.24
2579 2711 0.250513 CGGCTGCCCTAAAGAGTCTT 59.749 55.000 14.12 0.00 0.00 3.01
2580 2712 1.339151 CGGCTGCCCTAAAGAGTCTTT 60.339 52.381 21.35 21.35 0.00 2.52
2581 2713 2.796557 GGCTGCCCTAAAGAGTCTTTT 58.203 47.619 22.66 7.93 0.00 2.27
2582 2714 3.157881 GGCTGCCCTAAAGAGTCTTTTT 58.842 45.455 22.66 2.80 0.00 1.94
2600 2732 2.325583 TTTCCCGATCCTTTGATCCG 57.674 50.000 0.00 0.00 43.82 4.18
2601 2733 0.468226 TTCCCGATCCTTTGATCCGG 59.532 55.000 0.00 0.00 43.82 5.14
2602 2734 1.071471 CCCGATCCTTTGATCCGGG 59.929 63.158 0.00 8.65 46.04 5.73
2603 2735 1.696097 CCCGATCCTTTGATCCGGGT 61.696 60.000 13.40 0.00 46.07 5.28
2604 2736 0.180406 CCGATCCTTTGATCCGGGTT 59.820 55.000 0.00 0.00 43.82 4.11
2605 2737 1.408266 CCGATCCTTTGATCCGGGTTT 60.408 52.381 0.00 0.00 43.82 3.27
2606 2738 2.365582 CGATCCTTTGATCCGGGTTTT 58.634 47.619 0.00 0.00 43.82 2.43
2607 2739 2.752903 CGATCCTTTGATCCGGGTTTTT 59.247 45.455 0.00 0.00 43.82 1.94
2608 2740 3.181500 CGATCCTTTGATCCGGGTTTTTC 60.181 47.826 0.00 0.00 43.82 2.29
2609 2741 3.518992 TCCTTTGATCCGGGTTTTTCT 57.481 42.857 0.00 0.00 0.00 2.52
2610 2742 3.418047 TCCTTTGATCCGGGTTTTTCTC 58.582 45.455 0.00 0.00 0.00 2.87
2611 2743 3.073946 TCCTTTGATCCGGGTTTTTCTCT 59.926 43.478 0.00 0.00 0.00 3.10
2612 2744 3.440522 CCTTTGATCCGGGTTTTTCTCTC 59.559 47.826 0.00 0.00 0.00 3.20
2613 2745 4.327680 CTTTGATCCGGGTTTTTCTCTCT 58.672 43.478 0.00 0.00 0.00 3.10
2614 2746 3.611766 TGATCCGGGTTTTTCTCTCTC 57.388 47.619 0.00 0.00 0.00 3.20
2615 2747 2.903784 TGATCCGGGTTTTTCTCTCTCA 59.096 45.455 0.00 0.00 0.00 3.27
2616 2748 2.833631 TCCGGGTTTTTCTCTCTCAC 57.166 50.000 0.00 0.00 0.00 3.51
2617 2749 1.346722 TCCGGGTTTTTCTCTCTCACC 59.653 52.381 0.00 0.00 0.00 4.02
2618 2750 1.429463 CGGGTTTTTCTCTCTCACCG 58.571 55.000 0.00 0.00 0.00 4.94
2619 2751 1.809684 GGGTTTTTCTCTCTCACCGG 58.190 55.000 0.00 0.00 0.00 5.28
2620 2752 1.071857 GGGTTTTTCTCTCTCACCGGT 59.928 52.381 0.00 0.00 0.00 5.28
2621 2753 2.414806 GGTTTTTCTCTCTCACCGGTC 58.585 52.381 2.59 0.00 0.00 4.79
2622 2754 2.059541 GTTTTTCTCTCTCACCGGTCG 58.940 52.381 2.59 0.00 0.00 4.79
2623 2755 0.038526 TTTTCTCTCTCACCGGTCGC 60.039 55.000 2.59 0.00 0.00 5.19
2624 2756 0.894184 TTTCTCTCTCACCGGTCGCT 60.894 55.000 2.59 0.00 0.00 4.93
2625 2757 0.894184 TTCTCTCTCACCGGTCGCTT 60.894 55.000 2.59 0.00 0.00 4.68
2626 2758 0.894184 TCTCTCTCACCGGTCGCTTT 60.894 55.000 2.59 0.00 0.00 3.51
2627 2759 0.734253 CTCTCTCACCGGTCGCTTTG 60.734 60.000 2.59 0.00 0.00 2.77
2628 2760 1.176619 TCTCTCACCGGTCGCTTTGA 61.177 55.000 2.59 0.00 0.00 2.69
2629 2761 0.108615 CTCTCACCGGTCGCTTTGAT 60.109 55.000 2.59 0.00 0.00 2.57
2630 2762 0.108804 TCTCACCGGTCGCTTTGATC 60.109 55.000 2.59 0.00 0.00 2.92
2638 2770 4.395080 CGCTTTGATCGGCGTCTA 57.605 55.556 6.85 0.00 45.34 2.59
2639 2771 1.917921 CGCTTTGATCGGCGTCTAC 59.082 57.895 6.85 0.00 45.34 2.59
2640 2772 0.525668 CGCTTTGATCGGCGTCTACT 60.526 55.000 6.85 0.00 45.34 2.57
2641 2773 1.641577 GCTTTGATCGGCGTCTACTT 58.358 50.000 6.85 0.00 0.00 2.24
2642 2774 1.324736 GCTTTGATCGGCGTCTACTTG 59.675 52.381 6.85 0.00 0.00 3.16
2643 2775 2.607187 CTTTGATCGGCGTCTACTTGT 58.393 47.619 6.85 0.00 0.00 3.16
2644 2776 2.736144 TTGATCGGCGTCTACTTGTT 57.264 45.000 6.85 0.00 0.00 2.83
2645 2777 1.990799 TGATCGGCGTCTACTTGTTG 58.009 50.000 6.85 0.00 0.00 3.33
2646 2778 1.278238 GATCGGCGTCTACTTGTTGG 58.722 55.000 6.85 0.00 0.00 3.77
2647 2779 0.606604 ATCGGCGTCTACTTGTTGGT 59.393 50.000 6.85 0.00 0.00 3.67
2648 2780 0.390124 TCGGCGTCTACTTGTTGGTT 59.610 50.000 6.85 0.00 0.00 3.67
2649 2781 1.202557 TCGGCGTCTACTTGTTGGTTT 60.203 47.619 6.85 0.00 0.00 3.27
2650 2782 1.600485 CGGCGTCTACTTGTTGGTTTT 59.400 47.619 0.00 0.00 0.00 2.43
2651 2783 2.349155 CGGCGTCTACTTGTTGGTTTTC 60.349 50.000 0.00 0.00 0.00 2.29
2652 2784 2.031420 GGCGTCTACTTGTTGGTTTTCC 60.031 50.000 0.00 0.00 41.14 3.13
2653 2785 2.349155 GCGTCTACTTGTTGGTTTTCCG 60.349 50.000 0.00 0.00 44.36 4.30
2654 2786 2.222445 CGTCTACTTGTTGGTTTTCCGG 59.778 50.000 0.00 0.00 44.36 5.14
2655 2787 3.208594 GTCTACTTGTTGGTTTTCCGGT 58.791 45.455 0.00 0.00 44.36 5.28
2656 2788 3.249320 GTCTACTTGTTGGTTTTCCGGTC 59.751 47.826 0.00 0.00 44.36 4.79
2657 2789 2.430248 ACTTGTTGGTTTTCCGGTCT 57.570 45.000 0.00 0.00 44.36 3.85
2658 2790 3.564053 ACTTGTTGGTTTTCCGGTCTA 57.436 42.857 0.00 0.00 44.36 2.59
2659 2791 4.094830 ACTTGTTGGTTTTCCGGTCTAT 57.905 40.909 0.00 0.00 44.36 1.98
2660 2792 3.818773 ACTTGTTGGTTTTCCGGTCTATG 59.181 43.478 0.00 0.00 44.36 2.23
2661 2793 3.495434 TGTTGGTTTTCCGGTCTATGT 57.505 42.857 0.00 0.00 44.36 2.29
2662 2794 3.142951 TGTTGGTTTTCCGGTCTATGTG 58.857 45.455 0.00 0.00 44.36 3.21
2663 2795 3.181453 TGTTGGTTTTCCGGTCTATGTGA 60.181 43.478 0.00 0.00 44.36 3.58
2664 2796 3.992943 TGGTTTTCCGGTCTATGTGAT 57.007 42.857 0.00 0.00 44.36 3.06
2665 2797 3.869065 TGGTTTTCCGGTCTATGTGATC 58.131 45.455 0.00 0.00 44.36 2.92
2666 2798 3.203716 GGTTTTCCGGTCTATGTGATCC 58.796 50.000 0.00 0.00 0.00 3.36
2667 2799 2.864343 GTTTTCCGGTCTATGTGATCCG 59.136 50.000 0.00 0.00 38.31 4.18
2669 2801 2.426651 CCGGTCTATGTGATCCGGT 58.573 57.895 12.52 0.00 45.62 5.28
2670 2802 0.750850 CCGGTCTATGTGATCCGGTT 59.249 55.000 12.52 0.00 45.62 4.44
2671 2803 1.138266 CCGGTCTATGTGATCCGGTTT 59.862 52.381 12.52 0.00 45.62 3.27
2672 2804 2.201732 CGGTCTATGTGATCCGGTTTG 58.798 52.381 0.00 0.00 36.45 2.93
2673 2805 1.940613 GGTCTATGTGATCCGGTTTGC 59.059 52.381 0.00 0.00 0.00 3.68
2674 2806 1.593006 GTCTATGTGATCCGGTTTGCG 59.407 52.381 0.00 0.00 0.00 4.85
2675 2807 1.206132 TCTATGTGATCCGGTTTGCGT 59.794 47.619 0.00 0.00 0.00 5.24
2676 2808 1.593006 CTATGTGATCCGGTTTGCGTC 59.407 52.381 0.00 0.00 0.00 5.19
2677 2809 1.358725 ATGTGATCCGGTTTGCGTCG 61.359 55.000 0.00 0.00 0.00 5.12
2678 2810 3.115892 TGATCCGGTTTGCGTCGC 61.116 61.111 11.10 11.10 0.00 5.19
2679 2811 3.861263 GATCCGGTTTGCGTCGCC 61.861 66.667 15.88 0.00 0.00 5.54
2710 2842 4.509737 GACCCCGTGCGCCTCTAC 62.510 72.222 4.18 0.00 0.00 2.59
2712 2844 4.208686 CCCCGTGCGCCTCTACTC 62.209 72.222 4.18 0.00 0.00 2.59
2713 2845 4.208686 CCCGTGCGCCTCTACTCC 62.209 72.222 4.18 0.00 0.00 3.85
2714 2846 3.449227 CCGTGCGCCTCTACTCCA 61.449 66.667 4.18 0.00 0.00 3.86
2715 2847 2.571757 CGTGCGCCTCTACTCCAA 59.428 61.111 4.18 0.00 0.00 3.53
2716 2848 1.805945 CGTGCGCCTCTACTCCAAC 60.806 63.158 4.18 0.00 0.00 3.77
2717 2849 1.292223 GTGCGCCTCTACTCCAACA 59.708 57.895 4.18 0.00 0.00 3.33
2718 2850 1.014564 GTGCGCCTCTACTCCAACAC 61.015 60.000 4.18 0.00 0.00 3.32
2719 2851 1.448013 GCGCCTCTACTCCAACACC 60.448 63.158 0.00 0.00 0.00 4.16
2720 2852 1.153823 CGCCTCTACTCCAACACCG 60.154 63.158 0.00 0.00 0.00 4.94
2721 2853 1.218316 GCCTCTACTCCAACACCGG 59.782 63.158 0.00 0.00 0.00 5.28
2722 2854 1.218316 CCTCTACTCCAACACCGGC 59.782 63.158 0.00 0.00 0.00 6.13
2723 2855 1.153823 CTCTACTCCAACACCGGCG 60.154 63.158 0.00 0.00 0.00 6.46
2724 2856 2.813908 CTACTCCAACACCGGCGC 60.814 66.667 0.00 0.00 0.00 6.53
2725 2857 4.728102 TACTCCAACACCGGCGCG 62.728 66.667 0.00 0.00 0.00 6.86
2741 2873 2.962253 CGATCGGCCGGCTTCTTC 60.962 66.667 28.56 16.61 0.00 2.87
2742 2874 2.186903 GATCGGCCGGCTTCTTCA 59.813 61.111 28.56 2.60 0.00 3.02
2743 2875 1.884926 GATCGGCCGGCTTCTTCAG 60.885 63.158 28.56 9.21 0.00 3.02
2751 2883 2.815647 GCTTCTTCAGCGACCCGG 60.816 66.667 0.00 0.00 39.29 5.73
2752 2884 2.815647 CTTCTTCAGCGACCCGGC 60.816 66.667 0.00 0.00 0.00 6.13
2753 2885 4.735132 TTCTTCAGCGACCCGGCG 62.735 66.667 0.00 0.00 38.18 6.46
2778 2910 3.195698 GTCATGCGTCGGCCCTTC 61.196 66.667 0.00 0.00 38.85 3.46
2779 2911 3.700970 TCATGCGTCGGCCCTTCA 61.701 61.111 0.00 0.00 38.85 3.02
2780 2912 3.499737 CATGCGTCGGCCCTTCAC 61.500 66.667 0.00 0.00 38.85 3.18
2781 2913 4.778143 ATGCGTCGGCCCTTCACC 62.778 66.667 0.00 0.00 38.85 4.02
2815 2947 2.836360 GGCCCACCCGTCGATCTA 60.836 66.667 0.00 0.00 0.00 1.98
2816 2948 2.416260 GCCCACCCGTCGATCTAC 59.584 66.667 0.00 0.00 0.00 2.59
2817 2949 2.719979 CCCACCCGTCGATCTACG 59.280 66.667 12.50 12.50 42.49 3.51
2818 2950 2.025727 CCACCCGTCGATCTACGC 59.974 66.667 13.89 0.00 41.51 4.42
2819 2951 2.025727 CACCCGTCGATCTACGCC 59.974 66.667 13.89 0.00 41.51 5.68
2820 2952 3.580193 ACCCGTCGATCTACGCCG 61.580 66.667 13.89 8.54 42.94 6.46
2823 2955 4.977126 CGTCGATCTACGCCGGCC 62.977 72.222 23.46 4.12 39.67 6.13
2824 2956 4.977126 GTCGATCTACGCCGGCCG 62.977 72.222 23.46 21.04 42.26 6.13
2837 2969 4.699522 GGCCGTCTTCGCCCTGTT 62.700 66.667 0.00 0.00 31.51 3.16
2838 2970 3.119096 GCCGTCTTCGCCCTGTTC 61.119 66.667 0.00 0.00 35.54 3.18
2839 2971 2.434359 CCGTCTTCGCCCTGTTCC 60.434 66.667 0.00 0.00 35.54 3.62
2840 2972 2.809601 CGTCTTCGCCCTGTTCCG 60.810 66.667 0.00 0.00 0.00 4.30
2841 2973 2.654877 GTCTTCGCCCTGTTCCGA 59.345 61.111 0.00 0.00 0.00 4.55
2842 2974 1.737008 GTCTTCGCCCTGTTCCGAC 60.737 63.158 0.00 0.00 32.60 4.79
2843 2975 2.434359 CTTCGCCCTGTTCCGACC 60.434 66.667 0.00 0.00 32.60 4.79
2844 2976 4.367023 TTCGCCCTGTTCCGACCG 62.367 66.667 0.00 0.00 32.60 4.79
2856 2988 3.461773 CGACCGGGACTCCTGCAT 61.462 66.667 6.32 0.00 0.00 3.96
2857 2989 2.501610 GACCGGGACTCCTGCATC 59.498 66.667 6.32 0.00 0.00 3.91
2858 2990 2.284625 ACCGGGACTCCTGCATCA 60.285 61.111 6.32 0.00 0.00 3.07
2859 2991 2.187946 CCGGGACTCCTGCATCAC 59.812 66.667 0.00 0.00 0.00 3.06
2860 2992 2.187946 CGGGACTCCTGCATCACC 59.812 66.667 0.00 0.00 0.00 4.02
2861 2993 2.592308 GGGACTCCTGCATCACCC 59.408 66.667 0.00 0.00 0.00 4.61
2862 2994 2.592308 GGACTCCTGCATCACCCC 59.408 66.667 0.00 0.00 0.00 4.95
2863 2995 2.187946 GACTCCTGCATCACCCCG 59.812 66.667 0.00 0.00 0.00 5.73
2864 2996 2.284625 ACTCCTGCATCACCCCGA 60.285 61.111 0.00 0.00 0.00 5.14
2865 2997 2.187946 CTCCTGCATCACCCCGAC 59.812 66.667 0.00 0.00 0.00 4.79
2866 2998 2.606213 TCCTGCATCACCCCGACA 60.606 61.111 0.00 0.00 0.00 4.35
2867 2999 2.436646 CCTGCATCACCCCGACAC 60.437 66.667 0.00 0.00 0.00 3.67
2868 3000 2.815211 CTGCATCACCCCGACACG 60.815 66.667 0.00 0.00 0.00 4.49
2897 3029 2.823593 CCATGCGGCGGTCAATCA 60.824 61.111 9.78 0.00 0.00 2.57
2898 3030 2.404789 CATGCGGCGGTCAATCAC 59.595 61.111 9.78 0.00 0.00 3.06
2899 3031 3.195002 ATGCGGCGGTCAATCACG 61.195 61.111 9.78 0.00 0.00 4.35
2905 3037 3.186047 CGGTCAATCACGCCCGTC 61.186 66.667 0.00 0.00 35.78 4.79
2906 3038 2.818274 GGTCAATCACGCCCGTCC 60.818 66.667 0.00 0.00 0.00 4.79
2907 3039 2.047655 GTCAATCACGCCCGTCCA 60.048 61.111 0.00 0.00 0.00 4.02
2908 3040 2.047655 TCAATCACGCCCGTCCAC 60.048 61.111 0.00 0.00 0.00 4.02
2909 3041 3.124921 CAATCACGCCCGTCCACC 61.125 66.667 0.00 0.00 0.00 4.61
2910 3042 3.319198 AATCACGCCCGTCCACCT 61.319 61.111 0.00 0.00 0.00 4.00
2911 3043 3.310860 AATCACGCCCGTCCACCTC 62.311 63.158 0.00 0.00 0.00 3.85
2915 3047 4.452733 CGCCCGTCCACCTCCTTC 62.453 72.222 0.00 0.00 0.00 3.46
2916 3048 4.452733 GCCCGTCCACCTCCTTCG 62.453 72.222 0.00 0.00 0.00 3.79
2917 3049 2.995574 CCCGTCCACCTCCTTCGT 60.996 66.667 0.00 0.00 0.00 3.85
2918 3050 2.572284 CCGTCCACCTCCTTCGTC 59.428 66.667 0.00 0.00 0.00 4.20
2919 3051 1.977544 CCGTCCACCTCCTTCGTCT 60.978 63.158 0.00 0.00 0.00 4.18
2920 3052 1.533469 CCGTCCACCTCCTTCGTCTT 61.533 60.000 0.00 0.00 0.00 3.01
2921 3053 0.109226 CGTCCACCTCCTTCGTCTTC 60.109 60.000 0.00 0.00 0.00 2.87
2922 3054 0.109226 GTCCACCTCCTTCGTCTTCG 60.109 60.000 0.00 0.00 38.55 3.79
2923 3055 0.538977 TCCACCTCCTTCGTCTTCGT 60.539 55.000 0.00 0.00 38.33 3.85
2924 3056 0.109226 CCACCTCCTTCGTCTTCGTC 60.109 60.000 0.00 0.00 38.33 4.20
2925 3057 0.109226 CACCTCCTTCGTCTTCGTCC 60.109 60.000 0.00 0.00 38.33 4.79
2926 3058 0.538977 ACCTCCTTCGTCTTCGTCCA 60.539 55.000 0.00 0.00 38.33 4.02
2927 3059 0.171455 CCTCCTTCGTCTTCGTCCAG 59.829 60.000 0.00 0.00 38.33 3.86
2928 3060 0.456995 CTCCTTCGTCTTCGTCCAGC 60.457 60.000 0.00 0.00 38.33 4.85
2929 3061 1.176619 TCCTTCGTCTTCGTCCAGCA 61.177 55.000 0.00 0.00 38.33 4.41
2930 3062 1.009389 CCTTCGTCTTCGTCCAGCAC 61.009 60.000 0.00 0.00 38.33 4.40
2931 3063 1.006571 TTCGTCTTCGTCCAGCACC 60.007 57.895 0.00 0.00 38.33 5.01
2932 3064 1.740332 TTCGTCTTCGTCCAGCACCA 61.740 55.000 0.00 0.00 38.33 4.17
2955 3087 0.317479 CGTCCACCTCCTTCGTCTTT 59.683 55.000 0.00 0.00 0.00 2.52
3109 5888 1.215382 CGACTTCTCCGACATGGCA 59.785 57.895 0.00 0.00 37.80 4.92
3117 5896 1.341209 CTCCGACATGGCATACAGCTA 59.659 52.381 0.00 0.00 44.79 3.32
3125 5904 1.162800 GGCATACAGCTAGTGCAGGC 61.163 60.000 16.06 0.00 44.79 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.668497 GTAACTTAGAGGGTGTTTGAATAGATT 57.332 33.333 0.00 0.00 0.00 2.40
2 3 9.047947 AGTAACTTAGAGGGTGTTTGAATAGAT 57.952 33.333 0.00 0.00 0.00 1.98
3 4 8.431910 AGTAACTTAGAGGGTGTTTGAATAGA 57.568 34.615 0.00 0.00 0.00 1.98
4 5 9.152595 GAAGTAACTTAGAGGGTGTTTGAATAG 57.847 37.037 0.00 0.00 0.00 1.73
5 6 8.098912 GGAAGTAACTTAGAGGGTGTTTGAATA 58.901 37.037 0.00 0.00 0.00 1.75
6 7 6.940867 GGAAGTAACTTAGAGGGTGTTTGAAT 59.059 38.462 0.00 0.00 0.00 2.57
7 8 6.293698 GGAAGTAACTTAGAGGGTGTTTGAA 58.706 40.000 0.00 0.00 0.00 2.69
8 9 5.221783 GGGAAGTAACTTAGAGGGTGTTTGA 60.222 44.000 0.00 0.00 0.00 2.69
9 10 5.001874 GGGAAGTAACTTAGAGGGTGTTTG 58.998 45.833 0.00 0.00 0.00 2.93
10 11 4.661709 TGGGAAGTAACTTAGAGGGTGTTT 59.338 41.667 0.00 0.00 0.00 2.83
11 12 4.041321 GTGGGAAGTAACTTAGAGGGTGTT 59.959 45.833 0.00 0.00 0.00 3.32
12 13 3.581770 GTGGGAAGTAACTTAGAGGGTGT 59.418 47.826 0.00 0.00 0.00 4.16
13 14 3.838903 AGTGGGAAGTAACTTAGAGGGTG 59.161 47.826 0.00 0.00 0.00 4.61
14 15 4.143406 AGTGGGAAGTAACTTAGAGGGT 57.857 45.455 0.00 0.00 0.00 4.34
15 16 5.897824 TCATAGTGGGAAGTAACTTAGAGGG 59.102 44.000 0.00 0.00 0.00 4.30
16 17 6.183360 GGTCATAGTGGGAAGTAACTTAGAGG 60.183 46.154 0.00 0.00 0.00 3.69
17 18 6.380274 TGGTCATAGTGGGAAGTAACTTAGAG 59.620 42.308 0.00 0.00 0.00 2.43
18 19 6.258354 TGGTCATAGTGGGAAGTAACTTAGA 58.742 40.000 0.00 0.00 0.00 2.10
19 20 6.540438 TGGTCATAGTGGGAAGTAACTTAG 57.460 41.667 0.00 0.00 0.00 2.18
20 21 5.105064 GCTGGTCATAGTGGGAAGTAACTTA 60.105 44.000 0.00 0.00 0.00 2.24
21 22 4.323562 GCTGGTCATAGTGGGAAGTAACTT 60.324 45.833 0.00 0.00 0.00 2.66
22 23 3.197983 GCTGGTCATAGTGGGAAGTAACT 59.802 47.826 0.00 0.00 0.00 2.24
23 24 3.532542 GCTGGTCATAGTGGGAAGTAAC 58.467 50.000 0.00 0.00 0.00 2.50
24 25 2.504175 GGCTGGTCATAGTGGGAAGTAA 59.496 50.000 0.00 0.00 0.00 2.24
25 26 2.116238 GGCTGGTCATAGTGGGAAGTA 58.884 52.381 0.00 0.00 0.00 2.24
26 27 0.912486 GGCTGGTCATAGTGGGAAGT 59.088 55.000 0.00 0.00 0.00 3.01
27 28 1.207791 AGGCTGGTCATAGTGGGAAG 58.792 55.000 0.00 0.00 0.00 3.46
28 29 1.668826 AAGGCTGGTCATAGTGGGAA 58.331 50.000 0.00 0.00 0.00 3.97
29 30 2.398588 CTAAGGCTGGTCATAGTGGGA 58.601 52.381 0.00 0.00 0.00 4.37
30 31 1.417890 CCTAAGGCTGGTCATAGTGGG 59.582 57.143 0.00 0.00 0.00 4.61
31 32 1.202698 GCCTAAGGCTGGTCATAGTGG 60.203 57.143 0.00 0.00 46.69 4.00
32 33 2.246719 GCCTAAGGCTGGTCATAGTG 57.753 55.000 0.00 0.00 46.69 2.74
33 34 2.966223 ATGGCCTAAGGCTGGTCATAGT 60.966 50.000 9.07 0.00 46.75 2.12
34 35 1.701847 ATGGCCTAAGGCTGGTCATAG 59.298 52.381 9.07 0.00 46.75 2.23
35 36 1.819753 ATGGCCTAAGGCTGGTCATA 58.180 50.000 9.07 0.00 46.75 2.15
43 44 6.236928 CAAAGTGGATTGATGGCCTAAGGC 62.237 50.000 3.32 0.00 39.19 4.35
44 45 3.303351 AAGTGGATTGATGGCCTAAGG 57.697 47.619 3.32 0.00 0.00 2.69
45 46 4.272489 TCAAAGTGGATTGATGGCCTAAG 58.728 43.478 3.32 0.00 34.50 2.18
46 47 4.314522 TCAAAGTGGATTGATGGCCTAA 57.685 40.909 3.32 0.00 34.50 2.69
47 48 4.314522 TTCAAAGTGGATTGATGGCCTA 57.685 40.909 3.32 0.00 38.98 3.93
48 49 2.905415 TCAAAGTGGATTGATGGCCT 57.095 45.000 3.32 0.00 34.50 5.19
49 50 3.959535 TTTCAAAGTGGATTGATGGCC 57.040 42.857 0.00 0.00 38.98 5.36
50 51 3.996363 GGTTTTCAAAGTGGATTGATGGC 59.004 43.478 0.00 0.00 38.98 4.40
51 52 5.010922 TGAGGTTTTCAAAGTGGATTGATGG 59.989 40.000 0.00 0.00 38.98 3.51
52 53 6.088016 TGAGGTTTTCAAAGTGGATTGATG 57.912 37.500 0.00 0.00 38.98 3.07
53 54 6.729690 TTGAGGTTTTCAAAGTGGATTGAT 57.270 33.333 0.00 0.00 42.69 2.57
65 66 6.867816 GTGCATTTATGACATTGAGGTTTTCA 59.132 34.615 0.00 0.00 0.00 2.69
66 67 6.311200 GGTGCATTTATGACATTGAGGTTTTC 59.689 38.462 0.00 0.00 0.00 2.29
67 68 6.014327 AGGTGCATTTATGACATTGAGGTTTT 60.014 34.615 0.00 0.00 0.00 2.43
68 69 5.481473 AGGTGCATTTATGACATTGAGGTTT 59.519 36.000 0.00 0.00 0.00 3.27
69 70 5.018809 AGGTGCATTTATGACATTGAGGTT 58.981 37.500 0.00 0.00 0.00 3.50
70 71 4.603131 AGGTGCATTTATGACATTGAGGT 58.397 39.130 0.00 0.00 0.00 3.85
71 72 5.824624 AGTAGGTGCATTTATGACATTGAGG 59.175 40.000 0.00 0.00 0.00 3.86
72 73 6.539826 TCAGTAGGTGCATTTATGACATTGAG 59.460 38.462 0.00 0.00 0.00 3.02
73 74 6.413892 TCAGTAGGTGCATTTATGACATTGA 58.586 36.000 0.00 0.00 0.00 2.57
74 75 6.682423 TCAGTAGGTGCATTTATGACATTG 57.318 37.500 0.00 0.00 0.00 2.82
75 76 6.183360 CGTTCAGTAGGTGCATTTATGACATT 60.183 38.462 0.00 0.00 0.00 2.71
76 77 5.294306 CGTTCAGTAGGTGCATTTATGACAT 59.706 40.000 0.00 0.00 0.00 3.06
77 78 4.629634 CGTTCAGTAGGTGCATTTATGACA 59.370 41.667 0.00 0.00 0.00 3.58
78 79 4.034048 CCGTTCAGTAGGTGCATTTATGAC 59.966 45.833 0.00 0.00 0.00 3.06
79 80 4.081365 TCCGTTCAGTAGGTGCATTTATGA 60.081 41.667 0.00 0.00 0.00 2.15
80 81 4.188462 TCCGTTCAGTAGGTGCATTTATG 58.812 43.478 0.00 0.00 0.00 1.90
81 82 4.081087 ACTCCGTTCAGTAGGTGCATTTAT 60.081 41.667 0.00 0.00 0.00 1.40
82 83 3.259876 ACTCCGTTCAGTAGGTGCATTTA 59.740 43.478 0.00 0.00 0.00 1.40
83 84 2.038557 ACTCCGTTCAGTAGGTGCATTT 59.961 45.455 0.00 0.00 0.00 2.32
84 85 1.623811 ACTCCGTTCAGTAGGTGCATT 59.376 47.619 0.00 0.00 0.00 3.56
85 86 1.267121 ACTCCGTTCAGTAGGTGCAT 58.733 50.000 0.00 0.00 0.00 3.96
86 87 1.816835 CTACTCCGTTCAGTAGGTGCA 59.183 52.381 5.81 0.00 41.57 4.57
87 88 1.469423 GCTACTCCGTTCAGTAGGTGC 60.469 57.143 12.77 0.35 44.30 5.01
88 89 2.563471 GCTACTCCGTTCAGTAGGTG 57.437 55.000 12.77 0.00 44.30 4.00
90 91 3.243134 GCTAAGCTACTCCGTTCAGTAGG 60.243 52.174 12.77 1.59 44.30 3.18
91 92 3.243134 GGCTAAGCTACTCCGTTCAGTAG 60.243 52.174 8.42 8.42 46.13 2.57
92 93 2.686915 GGCTAAGCTACTCCGTTCAGTA 59.313 50.000 0.00 0.00 0.00 2.74
93 94 1.477295 GGCTAAGCTACTCCGTTCAGT 59.523 52.381 0.00 0.00 0.00 3.41
94 95 1.202428 GGGCTAAGCTACTCCGTTCAG 60.202 57.143 0.00 0.00 0.00 3.02
95 96 0.822164 GGGCTAAGCTACTCCGTTCA 59.178 55.000 0.00 0.00 0.00 3.18
96 97 1.112950 AGGGCTAAGCTACTCCGTTC 58.887 55.000 0.00 0.00 0.00 3.95
101 102 0.105778 CTGGCAGGGCTAAGCTACTC 59.894 60.000 6.61 0.00 0.00 2.59
164 165 4.921515 CGGCCATGATTGATTCATTCATTC 59.078 41.667 17.31 13.06 42.62 2.67
168 169 2.608752 GCCGGCCATGATTGATTCATTC 60.609 50.000 18.11 2.31 42.62 2.67
169 170 1.342174 GCCGGCCATGATTGATTCATT 59.658 47.619 18.11 0.00 42.62 2.57
170 171 0.963962 GCCGGCCATGATTGATTCAT 59.036 50.000 18.11 0.00 46.27 2.57
171 172 0.106569 AGCCGGCCATGATTGATTCA 60.107 50.000 26.15 0.00 39.12 2.57
172 173 0.595095 GAGCCGGCCATGATTGATTC 59.405 55.000 26.15 5.96 0.00 2.52
190 191 2.264480 CCGAGCATTGGGACGTGA 59.736 61.111 0.00 0.00 35.34 4.35
202 203 1.936436 TTGTCAATGCATGCCCGAGC 61.936 55.000 16.68 3.46 40.48 5.03
211 212 0.871057 TGCGTCGAATTGTCAATGCA 59.129 45.000 4.38 4.16 0.00 3.96
300 304 5.638657 CACAAGAACATCTCTTTCTCTCTGG 59.361 44.000 0.00 0.00 41.97 3.86
351 355 0.390860 CCTCTAGAACCGCCATGAGG 59.609 60.000 0.00 0.00 35.72 3.86
421 425 8.648097 CATGCGATACAAGATTATAGTAACCAC 58.352 37.037 0.00 0.00 0.00 4.16
422 426 8.581578 TCATGCGATACAAGATTATAGTAACCA 58.418 33.333 0.00 0.00 0.00 3.67
423 427 8.981724 TCATGCGATACAAGATTATAGTAACC 57.018 34.615 0.00 0.00 0.00 2.85
437 441 2.363359 ACTCTGCTCATCATGCGATACA 59.637 45.455 0.00 0.00 0.00 2.29
543 547 1.429148 CTCACGCGGATAAACAGGGC 61.429 60.000 12.47 0.00 0.00 5.19
544 548 0.108329 ACTCACGCGGATAAACAGGG 60.108 55.000 12.47 0.00 0.00 4.45
571 579 1.167781 TGGTCGTCGCTGTCAGTGTA 61.168 55.000 13.00 0.00 0.00 2.90
594 602 3.304592 GCAAAAATTTGGGCGATTGCTTT 60.305 39.130 13.29 0.00 39.87 3.51
634 642 1.227380 AATGTCTCGATCTGCGCCC 60.227 57.895 4.18 0.00 40.61 6.13
636 644 1.493950 CCCAATGTCTCGATCTGCGC 61.494 60.000 0.00 0.00 40.61 6.09
751 759 2.823924 AGCGCTACGAGAGAGAGATA 57.176 50.000 8.99 0.00 0.00 1.98
752 760 2.611971 CCTAGCGCTACGAGAGAGAGAT 60.612 54.545 14.45 0.00 0.00 2.75
753 761 1.269883 CCTAGCGCTACGAGAGAGAGA 60.270 57.143 14.45 0.00 0.00 3.10
836 859 2.223180 GGAAGTCTTTTTGAACGCACGT 60.223 45.455 0.00 0.00 0.00 4.49
977 1006 4.778143 GTGCAGCAGTACCCCCGG 62.778 72.222 0.00 0.00 0.00 5.73
1011 1040 2.102553 GTAGACGTGCTCCCTCGC 59.897 66.667 0.00 0.00 0.00 5.03
1012 1041 2.403987 CGTAGACGTGCTCCCTCG 59.596 66.667 0.00 0.00 34.11 4.63
1061 1094 0.596083 CGAGTAGGATCGCCAGCAAG 60.596 60.000 0.00 0.00 35.66 4.01
1062 1095 1.437573 CGAGTAGGATCGCCAGCAA 59.562 57.895 0.00 0.00 35.66 3.91
1076 1109 2.283532 AGGAGGTGCAGAGCGAGT 60.284 61.111 0.00 0.00 0.00 4.18
1081 1114 2.487428 CGACGAGGAGGTGCAGAG 59.513 66.667 0.00 0.00 0.00 3.35
1134 1167 2.372172 GTTCTTGAGGTGGAAGAAGGGA 59.628 50.000 0.00 0.00 39.53 4.20
1163 1196 1.812708 CGGAAAAACCACCGGAGAAGT 60.813 52.381 9.46 0.00 44.59 3.01
1173 1206 0.109723 CCTCCTGACCGGAAAAACCA 59.890 55.000 9.46 0.00 42.53 3.67
1174 1207 1.241990 GCCTCCTGACCGGAAAAACC 61.242 60.000 9.46 0.00 42.53 3.27
1191 1225 3.842925 TTCACACCTCCAAGCGGCC 62.843 63.158 0.00 0.00 0.00 6.13
1212 1246 4.921515 CCACATCAAAATCAGCACAGAAAG 59.078 41.667 0.00 0.00 0.00 2.62
1265 1299 2.600769 AACGTCGGAGCCTCCACT 60.601 61.111 12.13 0.00 35.91 4.00
1289 1323 2.627699 CTCTCCTGAATCACCTCTAGCC 59.372 54.545 0.00 0.00 0.00 3.93
1313 1347 0.736325 AGTGGATCAAGCACGTACGC 60.736 55.000 16.72 0.00 0.00 4.42
1387 1426 0.524392 AGAAGCGATCGAGAACAGCG 60.524 55.000 21.57 0.00 0.00 5.18
1407 1446 2.239654 GTTTCCCCCAGACTCATGATCA 59.760 50.000 0.00 0.00 0.00 2.92
1409 1448 1.210478 CGTTTCCCCCAGACTCATGAT 59.790 52.381 0.00 0.00 0.00 2.45
1431 1509 7.680442 TTCTGAAGAGATATAGATGGACTCG 57.320 40.000 0.00 0.00 33.53 4.18
1480 1558 4.498345 GGACAATGACACGGCTTGTTTTTA 60.498 41.667 0.00 0.00 39.17 1.52
1698 1826 1.621992 TGATCCGGGAGCAGTAGATC 58.378 55.000 11.64 0.00 35.09 2.75
1701 1829 1.808133 GCTTTGATCCGGGAGCAGTAG 60.808 57.143 15.38 16.49 35.29 2.57
1720 1849 6.484643 TGATTCATTGATTACCTAGCAAGAGC 59.515 38.462 0.00 0.00 42.56 4.09
1740 1869 9.908152 TCAGCAATATGATTGATTGATTGATTC 57.092 29.630 3.38 0.00 36.57 2.52
1743 1872 9.524106 GTTTCAGCAATATGATTGATTGATTGA 57.476 29.630 3.38 0.66 36.57 2.57
1744 1873 9.308318 TGTTTCAGCAATATGATTGATTGATTG 57.692 29.630 3.38 0.00 36.57 2.67
1745 1874 9.529325 CTGTTTCAGCAATATGATTGATTGATT 57.471 29.630 3.38 0.00 36.57 2.57
1746 1875 8.141909 CCTGTTTCAGCAATATGATTGATTGAT 58.858 33.333 3.38 0.00 36.57 2.57
1792 1921 2.516460 GCGTCGCTCTCCCTCCTA 60.516 66.667 10.68 0.00 0.00 2.94
1822 1951 0.181350 GAGCCATCCTCCCGAACATT 59.819 55.000 0.00 0.00 34.35 2.71
1873 2002 0.677288 TGGGAGTGTGACGATCGTTT 59.323 50.000 23.63 0.00 0.00 3.60
1927 2056 3.071206 GGCGAGCTGAGGGTCTGA 61.071 66.667 0.00 0.00 37.77 3.27
2143 2273 3.903714 TCAGGGACATCTCTTCAGTTTCA 59.096 43.478 0.00 0.00 0.00 2.69
2186 2316 1.130955 GCTGACATGTTTTGGTTGCG 58.869 50.000 0.00 0.00 0.00 4.85
2207 2337 3.250762 TGTCGATTTTTGTCAGGAGCAAG 59.749 43.478 0.00 0.00 0.00 4.01
2210 2340 5.106712 TGTTATGTCGATTTTTGTCAGGAGC 60.107 40.000 0.00 0.00 0.00 4.70
2247 2377 6.476380 TCACGTTACTCAACACTATCGTTTTT 59.524 34.615 0.00 0.00 34.05 1.94
2249 2379 5.522456 TCACGTTACTCAACACTATCGTTT 58.478 37.500 0.00 0.00 34.05 3.60
2250 2380 5.112220 TCACGTTACTCAACACTATCGTT 57.888 39.130 0.00 0.00 34.05 3.85
2252 2382 5.571741 ACAATCACGTTACTCAACACTATCG 59.428 40.000 0.00 0.00 34.05 2.92
2253 2383 6.946229 ACAATCACGTTACTCAACACTATC 57.054 37.500 0.00 0.00 34.05 2.08
2254 2384 8.997621 AATACAATCACGTTACTCAACACTAT 57.002 30.769 0.00 0.00 34.05 2.12
2255 2385 9.563898 CTAATACAATCACGTTACTCAACACTA 57.436 33.333 0.00 0.00 34.05 2.74
2339 2469 7.093727 GCATCGTGGGCATATATATAGGAGTAT 60.094 40.741 8.56 0.00 0.00 2.12
2376 2508 7.563556 AGGGATGGTGGAATAATTCGTTATTTT 59.436 33.333 0.00 0.00 0.00 1.82
2380 2512 5.368523 AGAGGGATGGTGGAATAATTCGTTA 59.631 40.000 0.00 0.00 0.00 3.18
2384 2516 5.536538 GGAAAGAGGGATGGTGGAATAATTC 59.463 44.000 0.00 0.00 0.00 2.17
2385 2517 5.458595 GGAAAGAGGGATGGTGGAATAATT 58.541 41.667 0.00 0.00 0.00 1.40
2386 2518 4.140924 GGGAAAGAGGGATGGTGGAATAAT 60.141 45.833 0.00 0.00 0.00 1.28
2387 2519 3.204382 GGGAAAGAGGGATGGTGGAATAA 59.796 47.826 0.00 0.00 0.00 1.40
2397 2529 5.039645 TCATGTTAGAAGGGAAAGAGGGAT 58.960 41.667 0.00 0.00 0.00 3.85
2398 2530 4.435137 TCATGTTAGAAGGGAAAGAGGGA 58.565 43.478 0.00 0.00 0.00 4.20
2399 2531 4.844349 TCATGTTAGAAGGGAAAGAGGG 57.156 45.455 0.00 0.00 0.00 4.30
2400 2532 7.972301 AGATATCATGTTAGAAGGGAAAGAGG 58.028 38.462 5.32 0.00 0.00 3.69
2403 2535 9.579768 CGATAGATATCATGTTAGAAGGGAAAG 57.420 37.037 5.32 0.00 39.76 2.62
2404 2536 8.035394 GCGATAGATATCATGTTAGAAGGGAAA 58.965 37.037 5.32 0.00 39.76 3.13
2405 2537 7.178451 TGCGATAGATATCATGTTAGAAGGGAA 59.822 37.037 5.32 0.00 39.76 3.97
2406 2538 6.663523 TGCGATAGATATCATGTTAGAAGGGA 59.336 38.462 5.32 0.00 39.76 4.20
2407 2539 6.867550 TGCGATAGATATCATGTTAGAAGGG 58.132 40.000 5.32 0.00 39.76 3.95
2408 2540 8.031864 ACTTGCGATAGATATCATGTTAGAAGG 58.968 37.037 5.32 0.00 39.76 3.46
2409 2541 8.978564 ACTTGCGATAGATATCATGTTAGAAG 57.021 34.615 5.32 1.85 39.76 2.85
2410 2542 7.750903 CGACTTGCGATAGATATCATGTTAGAA 59.249 37.037 5.32 0.00 44.57 2.10
2411 2543 7.119262 TCGACTTGCGATAGATATCATGTTAGA 59.881 37.037 5.32 0.00 45.59 2.10
2412 2544 7.244192 TCGACTTGCGATAGATATCATGTTAG 58.756 38.462 5.32 0.00 45.59 2.34
2413 2545 7.141100 TCGACTTGCGATAGATATCATGTTA 57.859 36.000 5.32 0.00 45.59 2.41
2414 2546 6.013842 TCGACTTGCGATAGATATCATGTT 57.986 37.500 5.32 0.00 45.59 2.71
2415 2547 5.629079 TCGACTTGCGATAGATATCATGT 57.371 39.130 5.32 0.00 45.59 3.21
2428 2560 2.618053 AGGGTTTAGAATCGACTTGCG 58.382 47.619 0.00 0.00 42.69 4.85
2429 2561 3.556365 GCTAGGGTTTAGAATCGACTTGC 59.444 47.826 0.00 0.00 0.00 4.01
2430 2562 4.120589 GGCTAGGGTTTAGAATCGACTTG 58.879 47.826 0.00 0.00 0.00 3.16
2431 2563 3.181478 CGGCTAGGGTTTAGAATCGACTT 60.181 47.826 0.00 0.00 0.00 3.01
2432 2564 2.361438 CGGCTAGGGTTTAGAATCGACT 59.639 50.000 0.00 0.00 0.00 4.18
2433 2565 2.740452 CGGCTAGGGTTTAGAATCGAC 58.260 52.381 0.00 0.00 0.00 4.20
2434 2566 1.068127 GCGGCTAGGGTTTAGAATCGA 59.932 52.381 0.00 0.00 0.00 3.59
2435 2567 1.499049 GCGGCTAGGGTTTAGAATCG 58.501 55.000 0.00 0.00 0.00 3.34
2436 2568 1.872653 CGGCGGCTAGGGTTTAGAATC 60.873 57.143 7.61 0.00 0.00 2.52
2437 2569 0.106149 CGGCGGCTAGGGTTTAGAAT 59.894 55.000 7.61 0.00 0.00 2.40
2438 2570 1.518774 CGGCGGCTAGGGTTTAGAA 59.481 57.895 7.61 0.00 0.00 2.10
2439 2571 3.085119 GCGGCGGCTAGGGTTTAGA 62.085 63.158 9.78 0.00 35.83 2.10
2440 2572 2.588034 GCGGCGGCTAGGGTTTAG 60.588 66.667 9.78 0.00 35.83 1.85
2441 2573 4.165486 GGCGGCGGCTAGGGTTTA 62.165 66.667 27.22 0.00 39.81 2.01
2484 2616 2.687566 ATGGAGACCGACCACCCC 60.688 66.667 0.00 0.00 40.36 4.95
2485 2617 1.338136 ATCATGGAGACCGACCACCC 61.338 60.000 0.00 0.00 40.36 4.61
2486 2618 0.105039 GATCATGGAGACCGACCACC 59.895 60.000 0.00 0.00 40.36 4.61
2487 2619 0.249073 CGATCATGGAGACCGACCAC 60.249 60.000 0.00 0.00 40.36 4.16
2488 2620 2.016393 GCGATCATGGAGACCGACCA 62.016 60.000 0.00 0.00 41.83 4.02
2489 2621 1.300233 GCGATCATGGAGACCGACC 60.300 63.158 0.00 0.00 0.00 4.79
2490 2622 1.300233 GGCGATCATGGAGACCGAC 60.300 63.158 0.00 0.00 0.00 4.79
2491 2623 2.845550 CGGCGATCATGGAGACCGA 61.846 63.158 0.00 0.00 43.19 4.69
2492 2624 2.355126 CGGCGATCATGGAGACCG 60.355 66.667 0.00 0.00 0.00 4.79
2493 2625 2.663188 GCGGCGATCATGGAGACC 60.663 66.667 12.98 0.00 0.00 3.85
2494 2626 2.663188 GGCGGCGATCATGGAGAC 60.663 66.667 12.98 0.00 0.00 3.36
2495 2627 4.284860 CGGCGGCGATCATGGAGA 62.285 66.667 29.19 0.00 0.00 3.71
2522 2654 2.361567 AAACCCTAGGTACGGGCGG 61.362 63.158 8.29 0.00 46.04 6.13
2523 2655 1.153509 CAAACCCTAGGTACGGGCG 60.154 63.158 8.29 0.00 46.04 6.13
2524 2656 0.107993 GACAAACCCTAGGTACGGGC 60.108 60.000 8.29 0.00 46.04 6.13
2526 2658 0.174162 CGGACAAACCCTAGGTACGG 59.826 60.000 8.29 0.00 33.12 4.02
2527 2659 0.890683 ACGGACAAACCCTAGGTACG 59.109 55.000 8.29 3.51 33.12 3.67
2528 2660 1.135286 CGACGGACAAACCCTAGGTAC 60.135 57.143 8.29 0.00 33.12 3.34
2529 2661 1.176527 CGACGGACAAACCCTAGGTA 58.823 55.000 8.29 0.00 33.12 3.08
2530 2662 1.538687 CCGACGGACAAACCCTAGGT 61.539 60.000 8.64 0.00 37.65 3.08
2531 2663 1.217244 CCGACGGACAAACCCTAGG 59.783 63.158 8.64 0.06 34.64 3.02
2532 2664 1.447314 GCCGACGGACAAACCCTAG 60.447 63.158 20.50 0.00 34.64 3.02
2533 2665 2.658422 GCCGACGGACAAACCCTA 59.342 61.111 20.50 0.00 34.64 3.53
2534 2666 4.324991 GGCCGACGGACAAACCCT 62.325 66.667 20.50 0.00 34.64 4.34
2558 2690 2.514824 CTCTTTAGGGCAGCCGGC 60.515 66.667 21.89 21.89 43.74 6.13
2559 2691 1.153349 GACTCTTTAGGGCAGCCGG 60.153 63.158 5.00 0.00 0.00 6.13
2560 2692 0.250513 AAGACTCTTTAGGGCAGCCG 59.749 55.000 5.00 0.00 0.00 5.52
2561 2693 2.498644 AAAGACTCTTTAGGGCAGCC 57.501 50.000 1.26 1.26 0.00 4.85
2588 2720 4.017126 GAGAAAAACCCGGATCAAAGGAT 58.983 43.478 0.73 0.00 36.13 3.24
2589 2721 3.073946 AGAGAAAAACCCGGATCAAAGGA 59.926 43.478 0.73 0.00 0.00 3.36
2590 2722 3.421844 AGAGAAAAACCCGGATCAAAGG 58.578 45.455 0.73 0.00 0.00 3.11
2591 2723 4.327680 AGAGAGAAAAACCCGGATCAAAG 58.672 43.478 0.73 0.00 0.00 2.77
2592 2724 4.202419 TGAGAGAGAAAAACCCGGATCAAA 60.202 41.667 0.73 0.00 0.00 2.69
2593 2725 3.326588 TGAGAGAGAAAAACCCGGATCAA 59.673 43.478 0.73 0.00 0.00 2.57
2594 2726 2.903784 TGAGAGAGAAAAACCCGGATCA 59.096 45.455 0.73 0.00 0.00 2.92
2595 2727 3.263261 GTGAGAGAGAAAAACCCGGATC 58.737 50.000 0.73 0.00 0.00 3.36
2596 2728 2.027100 GGTGAGAGAGAAAAACCCGGAT 60.027 50.000 0.73 0.00 0.00 4.18
2597 2729 1.346722 GGTGAGAGAGAAAAACCCGGA 59.653 52.381 0.73 0.00 0.00 5.14
2598 2730 1.809684 GGTGAGAGAGAAAAACCCGG 58.190 55.000 0.00 0.00 0.00 5.73
2599 2731 1.429463 CGGTGAGAGAGAAAAACCCG 58.571 55.000 0.00 0.00 0.00 5.28
2600 2732 1.071857 ACCGGTGAGAGAGAAAAACCC 59.928 52.381 6.12 0.00 0.00 4.11
2601 2733 2.414806 GACCGGTGAGAGAGAAAAACC 58.585 52.381 14.63 0.00 0.00 3.27
2602 2734 2.059541 CGACCGGTGAGAGAGAAAAAC 58.940 52.381 14.63 0.00 0.00 2.43
2603 2735 1.604693 GCGACCGGTGAGAGAGAAAAA 60.605 52.381 14.63 0.00 0.00 1.94
2604 2736 0.038526 GCGACCGGTGAGAGAGAAAA 60.039 55.000 14.63 0.00 0.00 2.29
2605 2737 0.894184 AGCGACCGGTGAGAGAGAAA 60.894 55.000 14.63 0.00 0.00 2.52
2606 2738 0.894184 AAGCGACCGGTGAGAGAGAA 60.894 55.000 14.63 0.00 0.00 2.87
2607 2739 0.894184 AAAGCGACCGGTGAGAGAGA 60.894 55.000 14.63 0.00 0.00 3.10
2608 2740 0.734253 CAAAGCGACCGGTGAGAGAG 60.734 60.000 14.63 0.00 0.00 3.20
2609 2741 1.176619 TCAAAGCGACCGGTGAGAGA 61.177 55.000 14.63 0.00 0.00 3.10
2610 2742 0.108615 ATCAAAGCGACCGGTGAGAG 60.109 55.000 14.63 0.94 0.00 3.20
2611 2743 0.108804 GATCAAAGCGACCGGTGAGA 60.109 55.000 14.63 0.10 0.00 3.27
2612 2744 1.413767 CGATCAAAGCGACCGGTGAG 61.414 60.000 14.63 7.14 0.00 3.51
2613 2745 1.445410 CGATCAAAGCGACCGGTGA 60.445 57.895 14.63 1.01 0.00 4.02
2614 2746 2.452813 CCGATCAAAGCGACCGGTG 61.453 63.158 14.63 5.62 35.83 4.94
2615 2747 2.125673 CCGATCAAAGCGACCGGT 60.126 61.111 6.92 6.92 35.83 5.28
2616 2748 3.564027 GCCGATCAAAGCGACCGG 61.564 66.667 0.00 0.00 42.74 5.28
2622 2754 1.324736 CAAGTAGACGCCGATCAAAGC 59.675 52.381 0.00 0.00 0.00 3.51
2623 2755 2.607187 ACAAGTAGACGCCGATCAAAG 58.393 47.619 0.00 0.00 0.00 2.77
2624 2756 2.734606 CAACAAGTAGACGCCGATCAAA 59.265 45.455 0.00 0.00 0.00 2.69
2625 2757 2.333926 CAACAAGTAGACGCCGATCAA 58.666 47.619 0.00 0.00 0.00 2.57
2626 2758 1.403647 CCAACAAGTAGACGCCGATCA 60.404 52.381 0.00 0.00 0.00 2.92
2627 2759 1.278238 CCAACAAGTAGACGCCGATC 58.722 55.000 0.00 0.00 0.00 3.69
2628 2760 0.606604 ACCAACAAGTAGACGCCGAT 59.393 50.000 0.00 0.00 0.00 4.18
2629 2761 0.390124 AACCAACAAGTAGACGCCGA 59.610 50.000 0.00 0.00 0.00 5.54
2630 2762 1.223187 AAACCAACAAGTAGACGCCG 58.777 50.000 0.00 0.00 0.00 6.46
2631 2763 2.031420 GGAAAACCAACAAGTAGACGCC 60.031 50.000 0.00 0.00 0.00 5.68
2632 2764 2.349155 CGGAAAACCAACAAGTAGACGC 60.349 50.000 0.00 0.00 0.00 5.19
2633 2765 2.222445 CCGGAAAACCAACAAGTAGACG 59.778 50.000 0.00 0.00 0.00 4.18
2634 2766 3.208594 ACCGGAAAACCAACAAGTAGAC 58.791 45.455 9.46 0.00 0.00 2.59
2635 2767 3.135167 AGACCGGAAAACCAACAAGTAGA 59.865 43.478 9.46 0.00 0.00 2.59
2636 2768 3.473625 AGACCGGAAAACCAACAAGTAG 58.526 45.455 9.46 0.00 0.00 2.57
2637 2769 3.564053 AGACCGGAAAACCAACAAGTA 57.436 42.857 9.46 0.00 0.00 2.24
2638 2770 2.430248 AGACCGGAAAACCAACAAGT 57.570 45.000 9.46 0.00 0.00 3.16
2639 2771 3.818773 ACATAGACCGGAAAACCAACAAG 59.181 43.478 9.46 0.00 0.00 3.16
2640 2772 3.566322 CACATAGACCGGAAAACCAACAA 59.434 43.478 9.46 0.00 0.00 2.83
2641 2773 3.142951 CACATAGACCGGAAAACCAACA 58.857 45.455 9.46 0.00 0.00 3.33
2642 2774 3.404899 TCACATAGACCGGAAAACCAAC 58.595 45.455 9.46 0.00 0.00 3.77
2643 2775 3.773418 TCACATAGACCGGAAAACCAA 57.227 42.857 9.46 0.00 0.00 3.67
2644 2776 3.370103 GGATCACATAGACCGGAAAACCA 60.370 47.826 9.46 0.00 0.00 3.67
2645 2777 3.203716 GGATCACATAGACCGGAAAACC 58.796 50.000 9.46 0.00 0.00 3.27
2646 2778 2.864343 CGGATCACATAGACCGGAAAAC 59.136 50.000 9.46 0.00 37.31 2.43
2647 2779 3.173668 CGGATCACATAGACCGGAAAA 57.826 47.619 9.46 0.00 37.31 2.29
2648 2780 2.882927 CGGATCACATAGACCGGAAA 57.117 50.000 9.46 0.00 37.31 3.13
2652 2784 2.201732 CAAACCGGATCACATAGACCG 58.798 52.381 9.46 0.00 39.25 4.79
2653 2785 1.940613 GCAAACCGGATCACATAGACC 59.059 52.381 9.46 0.00 0.00 3.85
2654 2786 1.593006 CGCAAACCGGATCACATAGAC 59.407 52.381 9.46 0.00 0.00 2.59
2655 2787 1.206132 ACGCAAACCGGATCACATAGA 59.794 47.619 9.46 0.00 42.52 1.98
2656 2788 1.593006 GACGCAAACCGGATCACATAG 59.407 52.381 9.46 0.00 42.52 2.23
2657 2789 1.647346 GACGCAAACCGGATCACATA 58.353 50.000 9.46 0.00 42.52 2.29
2658 2790 1.358725 CGACGCAAACCGGATCACAT 61.359 55.000 9.46 0.00 42.52 3.21
2659 2791 2.024868 CGACGCAAACCGGATCACA 61.025 57.895 9.46 0.00 42.52 3.58
2660 2792 2.776072 CGACGCAAACCGGATCAC 59.224 61.111 9.46 0.00 42.52 3.06
2661 2793 3.115892 GCGACGCAAACCGGATCA 61.116 61.111 16.42 0.00 42.52 2.92
2662 2794 3.861263 GGCGACGCAAACCGGATC 61.861 66.667 23.09 0.00 42.52 3.36
2693 2825 4.509737 GTAGAGGCGCACGGGGTC 62.510 72.222 10.83 0.00 0.00 4.46
2695 2827 4.208686 GAGTAGAGGCGCACGGGG 62.209 72.222 10.83 0.00 0.00 5.73
2696 2828 4.208686 GGAGTAGAGGCGCACGGG 62.209 72.222 10.83 0.00 0.00 5.28
2697 2829 3.001902 TTGGAGTAGAGGCGCACGG 62.002 63.158 10.83 0.00 0.00 4.94
2698 2830 1.805945 GTTGGAGTAGAGGCGCACG 60.806 63.158 10.83 0.00 0.00 5.34
2699 2831 1.014564 GTGTTGGAGTAGAGGCGCAC 61.015 60.000 10.83 2.06 0.00 5.34
2700 2832 1.292223 GTGTTGGAGTAGAGGCGCA 59.708 57.895 10.83 0.00 0.00 6.09
2701 2833 1.448013 GGTGTTGGAGTAGAGGCGC 60.448 63.158 0.00 0.00 0.00 6.53
2702 2834 1.153823 CGGTGTTGGAGTAGAGGCG 60.154 63.158 0.00 0.00 0.00 5.52
2703 2835 1.218316 CCGGTGTTGGAGTAGAGGC 59.782 63.158 0.00 0.00 0.00 4.70
2704 2836 1.218316 GCCGGTGTTGGAGTAGAGG 59.782 63.158 1.90 0.00 0.00 3.69
2705 2837 1.153823 CGCCGGTGTTGGAGTAGAG 60.154 63.158 6.91 0.00 0.00 2.43
2706 2838 2.967397 CGCCGGTGTTGGAGTAGA 59.033 61.111 6.91 0.00 0.00 2.59
2707 2839 2.813908 GCGCCGGTGTTGGAGTAG 60.814 66.667 17.91 0.00 0.00 2.57
2708 2840 4.728102 CGCGCCGGTGTTGGAGTA 62.728 66.667 17.91 0.00 0.00 2.59
2724 2856 2.962253 GAAGAAGCCGGCCGATCG 60.962 66.667 30.73 11.80 0.00 3.69
2725 2857 1.884926 CTGAAGAAGCCGGCCGATC 60.885 63.158 30.73 21.28 0.00 3.69
2726 2858 2.187946 CTGAAGAAGCCGGCCGAT 59.812 61.111 30.73 12.66 0.00 4.18
2735 2867 2.815647 GCCGGGTCGCTGAAGAAG 60.816 66.667 2.18 0.00 0.00 2.85
2736 2868 4.735132 CGCCGGGTCGCTGAAGAA 62.735 66.667 2.18 0.00 0.00 2.52
2761 2893 3.195698 GAAGGGCCGACGCATGAC 61.196 66.667 0.00 0.00 36.38 3.06
2762 2894 3.700970 TGAAGGGCCGACGCATGA 61.701 61.111 0.00 0.00 36.38 3.07
2763 2895 3.499737 GTGAAGGGCCGACGCATG 61.500 66.667 0.00 0.00 36.38 4.06
2764 2896 4.778143 GGTGAAGGGCCGACGCAT 62.778 66.667 15.67 0.00 36.38 4.73
2798 2930 2.836360 TAGATCGACGGGTGGGCC 60.836 66.667 0.00 0.00 0.00 5.80
2799 2931 2.416260 GTAGATCGACGGGTGGGC 59.584 66.667 0.00 0.00 0.00 5.36
2800 2932 2.719979 CGTAGATCGACGGGTGGG 59.280 66.667 19.23 0.00 42.86 4.61
2801 2933 2.025727 GCGTAGATCGACGGGTGG 59.974 66.667 26.24 2.39 43.13 4.61
2802 2934 2.025727 GGCGTAGATCGACGGGTG 59.974 66.667 26.24 2.74 43.13 4.61
2807 2939 4.977126 CGGCCGGCGTAGATCGAC 62.977 72.222 22.54 1.28 45.27 4.20
2809 2941 4.977126 GACGGCCGGCGTAGATCG 62.977 72.222 31.76 19.49 43.12 3.69
2810 2942 3.135056 AAGACGGCCGGCGTAGATC 62.135 63.158 31.76 16.04 0.00 2.75
2811 2943 3.135056 GAAGACGGCCGGCGTAGAT 62.135 63.158 31.76 13.29 0.00 1.98
2812 2944 3.818787 GAAGACGGCCGGCGTAGA 61.819 66.667 31.76 0.00 0.00 2.59
2822 2954 2.434359 GGAACAGGGCGAAGACGG 60.434 66.667 0.00 0.00 33.41 4.79
2823 2955 2.809601 CGGAACAGGGCGAAGACG 60.810 66.667 0.00 0.00 33.41 4.18
2824 2956 1.737008 GTCGGAACAGGGCGAAGAC 60.737 63.158 0.00 0.00 0.00 3.01
2825 2957 2.654877 GTCGGAACAGGGCGAAGA 59.345 61.111 0.00 0.00 0.00 2.87
2826 2958 2.434359 GGTCGGAACAGGGCGAAG 60.434 66.667 0.00 0.00 0.00 3.79
2827 2959 4.367023 CGGTCGGAACAGGGCGAA 62.367 66.667 0.00 0.00 0.00 4.70
2832 2964 2.995574 AGTCCCGGTCGGAACAGG 60.996 66.667 11.39 0.00 44.47 4.00
2833 2965 2.572284 GAGTCCCGGTCGGAACAG 59.428 66.667 11.39 0.00 44.47 3.16
2834 2966 2.993264 GGAGTCCCGGTCGGAACA 60.993 66.667 11.39 0.00 44.47 3.18
2835 2967 2.679287 AGGAGTCCCGGTCGGAAC 60.679 66.667 11.39 0.00 44.47 3.62
2836 2968 2.678934 CAGGAGTCCCGGTCGGAA 60.679 66.667 11.39 0.00 44.47 4.30
2839 2971 3.432051 GATGCAGGAGTCCCGGTCG 62.432 68.421 5.25 0.00 37.58 4.79
2840 2972 2.359169 TGATGCAGGAGTCCCGGTC 61.359 63.158 5.25 0.00 37.58 4.79
2841 2973 2.284625 TGATGCAGGAGTCCCGGT 60.285 61.111 5.25 0.00 37.58 5.28
2842 2974 2.187946 GTGATGCAGGAGTCCCGG 59.812 66.667 5.25 0.00 37.58 5.73
2843 2975 2.187946 GGTGATGCAGGAGTCCCG 59.812 66.667 5.25 0.00 37.58 5.14
2844 2976 2.592308 GGGTGATGCAGGAGTCCC 59.408 66.667 5.25 0.00 0.00 4.46
2845 2977 2.592308 GGGGTGATGCAGGAGTCC 59.408 66.667 0.00 0.00 0.00 3.85
2846 2978 2.187946 CGGGGTGATGCAGGAGTC 59.812 66.667 0.00 0.00 0.00 3.36
2847 2979 2.284625 TCGGGGTGATGCAGGAGT 60.285 61.111 0.00 0.00 0.00 3.85
2848 2980 2.187946 GTCGGGGTGATGCAGGAG 59.812 66.667 0.00 0.00 0.00 3.69
2849 2981 2.606213 TGTCGGGGTGATGCAGGA 60.606 61.111 0.00 0.00 0.00 3.86
2850 2982 2.436646 GTGTCGGGGTGATGCAGG 60.437 66.667 0.00 0.00 0.00 4.85
2851 2983 2.815211 CGTGTCGGGGTGATGCAG 60.815 66.667 0.00 0.00 0.00 4.41
2852 2984 4.386951 CCGTGTCGGGGTGATGCA 62.387 66.667 0.00 0.00 44.15 3.96
2880 3012 2.823593 TGATTGACCGCCGCATGG 60.824 61.111 0.00 0.00 38.77 3.66
2881 3013 2.404789 GTGATTGACCGCCGCATG 59.595 61.111 0.00 0.00 0.00 4.06
2882 3014 3.195002 CGTGATTGACCGCCGCAT 61.195 61.111 0.00 0.00 0.00 4.73
2889 3021 2.818274 GGACGGGCGTGATTGACC 60.818 66.667 0.00 0.00 0.00 4.02
2890 3022 2.047655 TGGACGGGCGTGATTGAC 60.048 61.111 0.00 0.00 0.00 3.18
2891 3023 2.047655 GTGGACGGGCGTGATTGA 60.048 61.111 0.00 0.00 0.00 2.57
2892 3024 3.124921 GGTGGACGGGCGTGATTG 61.125 66.667 0.00 0.00 0.00 2.67
2893 3025 3.310860 GAGGTGGACGGGCGTGATT 62.311 63.158 0.00 0.00 0.00 2.57
2894 3026 3.771160 GAGGTGGACGGGCGTGAT 61.771 66.667 0.00 0.00 0.00 3.06
2898 3030 4.452733 GAAGGAGGTGGACGGGCG 62.453 72.222 0.00 0.00 0.00 6.13
2899 3031 4.452733 CGAAGGAGGTGGACGGGC 62.453 72.222 0.00 0.00 0.00 6.13
2900 3032 2.995574 ACGAAGGAGGTGGACGGG 60.996 66.667 0.00 0.00 0.00 5.28
2901 3033 1.533469 AAGACGAAGGAGGTGGACGG 61.533 60.000 0.00 0.00 0.00 4.79
2902 3034 0.109226 GAAGACGAAGGAGGTGGACG 60.109 60.000 0.00 0.00 0.00 4.79
2903 3035 0.109226 CGAAGACGAAGGAGGTGGAC 60.109 60.000 0.00 0.00 42.66 4.02
2904 3036 0.538977 ACGAAGACGAAGGAGGTGGA 60.539 55.000 0.00 0.00 42.66 4.02
2905 3037 0.109226 GACGAAGACGAAGGAGGTGG 60.109 60.000 0.00 0.00 42.66 4.61
2906 3038 0.109226 GGACGAAGACGAAGGAGGTG 60.109 60.000 0.00 0.00 42.66 4.00
2907 3039 0.538977 TGGACGAAGACGAAGGAGGT 60.539 55.000 0.00 0.00 42.66 3.85
2908 3040 0.171455 CTGGACGAAGACGAAGGAGG 59.829 60.000 0.00 0.00 42.66 4.30
2909 3041 0.456995 GCTGGACGAAGACGAAGGAG 60.457 60.000 0.00 0.00 42.66 3.69
2910 3042 1.176619 TGCTGGACGAAGACGAAGGA 61.177 55.000 0.00 0.00 42.66 3.36
2911 3043 1.009389 GTGCTGGACGAAGACGAAGG 61.009 60.000 0.00 0.00 42.66 3.46
2912 3044 1.009389 GGTGCTGGACGAAGACGAAG 61.009 60.000 0.00 0.00 42.66 3.79
2913 3045 1.006571 GGTGCTGGACGAAGACGAA 60.007 57.895 0.00 0.00 42.66 3.85
2914 3046 2.142357 CTGGTGCTGGACGAAGACGA 62.142 60.000 0.00 0.00 42.66 4.20
2915 3047 1.734477 CTGGTGCTGGACGAAGACG 60.734 63.158 0.00 0.00 45.75 4.18
2916 3048 2.029844 GCTGGTGCTGGACGAAGAC 61.030 63.158 5.10 0.00 36.03 3.01
2917 3049 2.343758 GCTGGTGCTGGACGAAGA 59.656 61.111 5.10 0.00 36.03 2.87
2918 3050 2.743928 GGCTGGTGCTGGACGAAG 60.744 66.667 0.00 0.00 39.59 3.79
2919 3051 4.329545 GGGCTGGTGCTGGACGAA 62.330 66.667 0.00 0.00 39.59 3.85
2928 3060 4.394712 GAGGTGGACGGGCTGGTG 62.395 72.222 0.00 0.00 0.00 4.17
2931 3063 3.316573 GAAGGAGGTGGACGGGCTG 62.317 68.421 0.00 0.00 0.00 4.85
2932 3064 3.003763 GAAGGAGGTGGACGGGCT 61.004 66.667 0.00 0.00 0.00 5.19
2944 3076 0.756294 TGCTGGACAAAGACGAAGGA 59.244 50.000 0.00 0.00 0.00 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.