Multiple sequence alignment - TraesCS2A01G150100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G150100 chr2A 100.000 4038 0 0 1 4038 97846577 97850614 0.000000e+00 7457.0
1 TraesCS2A01G150100 chr2A 87.339 466 45 8 3426 3889 8365905 8365452 4.620000e-144 521.0
2 TraesCS2A01G150100 chr2A 89.908 218 21 1 2052 2268 73282552 73282769 3.070000e-71 279.0
3 TraesCS2A01G150100 chr2A 82.230 287 37 12 2755 3039 8366947 8366673 6.750000e-58 235.0
4 TraesCS2A01G150100 chr2A 86.127 173 10 5 3031 3200 8366713 8366552 1.490000e-39 174.0
5 TraesCS2A01G150100 chr2A 100.000 30 0 0 345 374 97846894 97846923 5.640000e-04 56.5
6 TraesCS2A01G150100 chr2A 100.000 30 0 0 318 347 97846921 97846950 5.640000e-04 56.5
7 TraesCS2A01G150100 chr5B 93.103 1160 41 6 836 1989 678673532 678674658 0.000000e+00 1663.0
8 TraesCS2A01G150100 chr5B 93.210 1134 52 18 2622 3743 366499687 366500807 0.000000e+00 1644.0
9 TraesCS2A01G150100 chr5B 96.707 577 7 1 1 565 678672959 678673535 0.000000e+00 950.0
10 TraesCS2A01G150100 chr5B 87.669 519 34 13 1410 1901 664018758 664019273 9.730000e-161 577.0
11 TraesCS2A01G150100 chr5B 91.987 312 15 5 3734 4038 366502975 366503283 2.880000e-116 429.0
12 TraesCS2A01G150100 chr5B 92.734 289 21 0 2272 2560 633283671 633283959 6.240000e-113 418.0
13 TraesCS2A01G150100 chr5B 88.818 313 20 4 1101 1400 127502348 127502038 1.770000e-98 370.0
14 TraesCS2A01G150100 chr5B 91.667 264 17 3 1127 1389 704279044 704279303 1.070000e-95 361.0
15 TraesCS2A01G150100 chr5B 88.889 117 13 0 2628 2744 590702932 590703048 1.170000e-30 145.0
16 TraesCS2A01G150100 chr5B 97.222 72 2 0 1034 1105 252300558 252300487 5.480000e-24 122.0
17 TraesCS2A01G150100 chr5B 100.000 65 0 0 1034 1098 127504061 127504125 1.970000e-23 121.0
18 TraesCS2A01G150100 chr5B 98.529 68 1 0 1034 1101 704278153 704278086 1.970000e-23 121.0
19 TraesCS2A01G150100 chr5B 90.411 73 6 1 836 907 166158027 166158099 1.190000e-15 95.3
20 TraesCS2A01G150100 chr5B 89.041 73 7 1 836 907 165766414 165766486 5.560000e-14 89.8
21 TraesCS2A01G150100 chr5B 100.000 30 0 0 345 374 678673288 678673317 5.640000e-04 56.5
22 TraesCS2A01G150100 chr5B 100.000 30 0 0 318 347 678673315 678673344 5.640000e-04 56.5
23 TraesCS2A01G150100 chr6B 90.507 769 39 17 1527 2268 173904640 173903879 0.000000e+00 985.0
24 TraesCS2A01G150100 chr6B 97.112 277 8 0 564 840 121530252 121529976 6.110000e-128 468.0
25 TraesCS2A01G150100 chr3B 91.262 721 28 8 3322 4038 215590769 215591458 0.000000e+00 950.0
26 TraesCS2A01G150100 chr3B 89.125 423 13 6 3621 4038 740991764 740992158 2.800000e-136 496.0
27 TraesCS2A01G150100 chr3B 93.750 288 18 0 2273 2560 782479008 782479295 2.230000e-117 433.0
28 TraesCS2A01G150100 chr3B 96.491 57 2 0 258 314 597840608 597840664 1.190000e-15 95.3
29 TraesCS2A01G150100 chr5A 95.752 565 20 2 836 1400 504719578 504720138 0.000000e+00 907.0
30 TraesCS2A01G150100 chr5A 89.011 546 33 9 1410 1928 654614322 654614867 0.000000e+00 651.0
31 TraesCS2A01G150100 chr5A 97.183 284 7 1 557 839 470042703 470042986 2.820000e-131 479.0
32 TraesCS2A01G150100 chr5A 93.031 287 19 1 2272 2558 667930641 667930356 6.240000e-113 418.0
33 TraesCS2A01G150100 chr5A 99.095 221 2 0 345 565 504719361 504719581 8.130000e-107 398.0
34 TraesCS2A01G150100 chr5A 94.332 247 2 1 1 235 504719081 504719327 6.380000e-98 368.0
35 TraesCS2A01G150100 chr5A 92.444 225 16 1 2044 2267 544032716 544032940 1.810000e-83 320.0
36 TraesCS2A01G150100 chr5A 100.000 65 0 0 1034 1098 122956165 122956229 1.970000e-23 121.0
37 TraesCS2A01G150100 chr5A 100.000 62 0 0 286 347 504719329 504719390 9.170000e-22 115.0
38 TraesCS2A01G150100 chr5D 88.561 542 38 6 1411 1928 527495130 527495671 1.580000e-178 636.0
39 TraesCS2A01G150100 chr5D 93.403 288 19 0 2273 2560 549921559 549921272 1.040000e-115 427.0
40 TraesCS2A01G150100 chr5D 93.056 288 20 0 2273 2560 395951427 395951140 4.830000e-114 422.0
41 TraesCS2A01G150100 chr5D 81.818 154 24 4 2627 2777 15570806 15570958 4.240000e-25 126.0
42 TraesCS2A01G150100 chr5D 98.462 65 1 0 1034 1098 115950057 115950121 9.170000e-22 115.0
43 TraesCS2A01G150100 chr2D 87.554 466 48 5 3426 3889 8728949 8729406 7.680000e-147 531.0
44 TraesCS2A01G150100 chr2D 93.103 290 15 1 2275 2559 403188617 403188328 1.740000e-113 420.0
45 TraesCS2A01G150100 chr2D 86.127 173 10 4 3031 3200 8720393 8720554 1.490000e-39 174.0
46 TraesCS2A01G150100 chr2D 92.958 71 5 0 2559 2629 98986320 98986390 1.990000e-18 104.0
47 TraesCS2A01G150100 chr2D 88.372 86 8 1 3219 3304 8728846 8728929 7.140000e-18 102.0
48 TraesCS2A01G150100 chr1B 89.835 423 11 5 3621 4038 627103854 627103459 7.740000e-142 514.0
49 TraesCS2A01G150100 chr1B 97.473 277 7 0 562 838 354582732 354583008 1.310000e-129 473.0
50 TraesCS2A01G150100 chr1B 92.000 300 19 3 1101 1400 332154434 332154728 2.250000e-112 416.0
51 TraesCS2A01G150100 chr1B 91.667 264 17 4 1127 1389 169941991 169942250 1.070000e-95 361.0
52 TraesCS2A01G150100 chr1B 98.529 68 1 0 1034 1101 169941165 169941098 1.970000e-23 121.0
53 TraesCS2A01G150100 chr1B 98.529 68 1 0 1034 1101 332153552 332153485 1.970000e-23 121.0
54 TraesCS2A01G150100 chr2B 86.481 466 53 5 3426 3889 12022081 12021624 1.680000e-138 503.0
55 TraesCS2A01G150100 chr2B 98.195 277 5 0 562 838 714072475 714072751 6.070000e-133 484.0
56 TraesCS2A01G150100 chr2B 96.703 273 8 1 564 836 211627318 211627589 1.710000e-123 453.0
57 TraesCS2A01G150100 chr2B 92.308 299 22 1 2271 2568 504788639 504788341 1.340000e-114 424.0
58 TraesCS2A01G150100 chr2B 82.192 292 36 9 2750 3039 12023030 12022753 1.880000e-58 237.0
59 TraesCS2A01G150100 chr2B 86.705 173 9 5 3031 3200 12022793 12022632 3.210000e-41 180.0
60 TraesCS2A01G150100 chr2B 88.189 127 12 3 2626 2751 486588634 486588510 9.040000e-32 148.0
61 TraesCS2A01G150100 chr2B 85.859 99 11 2 3206 3304 12022196 12022101 7.140000e-18 102.0
62 TraesCS2A01G150100 chr7A 97.048 271 8 0 566 836 18892339 18892609 1.320000e-124 457.0
63 TraesCS2A01G150100 chr7A 94.624 279 13 2 562 839 45196227 45195950 8.020000e-117 431.0
64 TraesCS2A01G150100 chr7A 88.333 120 11 2 1921 2037 675227287 675227168 1.510000e-29 141.0
65 TraesCS2A01G150100 chr7A 95.918 49 2 0 3919 3967 732747551 732747599 3.350000e-11 80.5
66 TraesCS2A01G150100 chr7A 93.750 48 3 0 3920 3967 732729693 732729740 5.600000e-09 73.1
67 TraesCS2A01G150100 chr7A 94.595 37 1 1 343 379 706397349 706397384 5.640000e-04 56.5
68 TraesCS2A01G150100 chr3A 95.971 273 10 1 564 836 57259187 57259458 3.700000e-120 442.0
69 TraesCS2A01G150100 chr3A 94.737 57 3 0 258 314 596357683 596357627 5.560000e-14 89.8
70 TraesCS2A01G150100 chr3A 94.737 57 3 0 258 314 597234246 597234302 5.560000e-14 89.8
71 TraesCS2A01G150100 chr7B 94.565 276 15 0 561 836 595309257 595309532 1.040000e-115 427.0
72 TraesCS2A01G150100 chr7B 92.766 235 15 2 2034 2267 559514621 559514854 5.000000e-89 339.0
73 TraesCS2A01G150100 chr7B 90.323 124 12 0 2628 2751 538426822 538426699 3.230000e-36 163.0
74 TraesCS2A01G150100 chr7B 82.857 175 21 4 3802 3967 750595860 750596034 9.040000e-32 148.0
75 TraesCS2A01G150100 chr7B 84.677 124 7 6 1920 2031 653021686 653021809 3.300000e-21 113.0
76 TraesCS2A01G150100 chr7B 82.308 130 11 5 912 1033 706385837 706385712 7.140000e-18 102.0
77 TraesCS2A01G150100 chr7D 93.333 285 18 1 2275 2559 530408076 530408359 1.740000e-113 420.0
78 TraesCS2A01G150100 chr7D 85.915 355 15 8 1920 2271 92811547 92811869 2.990000e-91 346.0
79 TraesCS2A01G150100 chr7D 91.111 225 19 1 2045 2268 137855524 137855300 1.820000e-78 303.0
80 TraesCS2A01G150100 chr7D 83.799 179 18 4 866 1033 614350848 614351026 4.180000e-35 159.0
81 TraesCS2A01G150100 chr7D 88.430 121 12 2 2629 2748 180831782 180831901 1.170000e-30 145.0
82 TraesCS2A01G150100 chr7D 89.024 82 3 4 1953 2031 584857854 584857932 3.320000e-16 97.1
83 TraesCS2A01G150100 chr1D 92.491 293 22 0 2267 2559 120235631 120235923 1.740000e-113 420.0
84 TraesCS2A01G150100 chr4B 92.045 264 16 3 1127 1389 175549637 175549896 2.290000e-97 366.0
85 TraesCS2A01G150100 chr4B 92.045 264 16 3 1127 1389 564198602 564198861 2.290000e-97 366.0
86 TraesCS2A01G150100 chr4B 85.185 189 21 7 2630 2814 659070806 659070621 1.920000e-43 187.0
87 TraesCS2A01G150100 chr1A 89.000 300 26 4 1101 1400 483641454 483641162 8.250000e-97 364.0
88 TraesCS2A01G150100 chr1A 90.254 236 19 4 2034 2266 374535538 374535304 5.070000e-79 305.0
89 TraesCS2A01G150100 chr1A 89.916 238 20 4 2034 2268 445896407 445896643 1.820000e-78 303.0
90 TraesCS2A01G150100 chr1A 87.500 120 15 0 2629 2748 70915593 70915712 5.440000e-29 139.0
91 TraesCS2A01G150100 chr4D 94.000 200 8 4 836 1033 228832991 228833188 2.360000e-77 300.0
92 TraesCS2A01G150100 chr4D 80.105 191 28 10 2632 2818 108913324 108913140 2.530000e-27 134.0
93 TraesCS2A01G150100 chr3D 87.395 238 26 4 2034 2268 143621059 143621295 1.850000e-68 270.0
94 TraesCS2A01G150100 chr3D 96.491 57 2 0 258 314 454980873 454980929 1.190000e-15 95.3
95 TraesCS2A01G150100 chr3D 94.737 57 3 0 258 314 454219802 454219746 5.560000e-14 89.8
96 TraesCS2A01G150100 chr6A 100.000 39 0 0 995 1033 34546244 34546206 5.600000e-09 73.1
97 TraesCS2A01G150100 chr6A 100.000 32 0 0 937 968 34546277 34546246 4.360000e-05 60.2
98 TraesCS2A01G150100 chr4A 91.667 48 4 0 3920 3967 736345035 736344988 2.600000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G150100 chr2A 97846577 97850614 4037 False 2523.333333 7457 100.00000 1 4038 3 chr2A.!!$F2 4037
1 TraesCS2A01G150100 chr2A 8365452 8366947 1495 True 310.000000 521 85.23200 2755 3889 3 chr2A.!!$R1 1134
2 TraesCS2A01G150100 chr5B 366499687 366503283 3596 False 1036.500000 1644 92.59850 2622 4038 2 chr5B.!!$F8 1416
3 TraesCS2A01G150100 chr5B 678672959 678674658 1699 False 681.500000 1663 97.45250 1 1989 4 chr5B.!!$F9 1988
4 TraesCS2A01G150100 chr5B 664018758 664019273 515 False 577.000000 577 87.66900 1410 1901 1 chr5B.!!$F6 491
5 TraesCS2A01G150100 chr6B 173903879 173904640 761 True 985.000000 985 90.50700 1527 2268 1 chr6B.!!$R2 741
6 TraesCS2A01G150100 chr3B 215590769 215591458 689 False 950.000000 950 91.26200 3322 4038 1 chr3B.!!$F1 716
7 TraesCS2A01G150100 chr5A 654614322 654614867 545 False 651.000000 651 89.01100 1410 1928 1 chr5A.!!$F4 518
8 TraesCS2A01G150100 chr5A 504719081 504720138 1057 False 447.000000 907 97.29475 1 1400 4 chr5A.!!$F5 1399
9 TraesCS2A01G150100 chr5D 527495130 527495671 541 False 636.000000 636 88.56100 1411 1928 1 chr5D.!!$F3 517
10 TraesCS2A01G150100 chr2D 8728846 8729406 560 False 316.500000 531 87.96300 3219 3889 2 chr2D.!!$F3 670
11 TraesCS2A01G150100 chr2B 12021624 12023030 1406 True 255.500000 503 85.30925 2750 3889 4 chr2B.!!$R3 1139

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
275 288 0.584396 TGTTGGATTTCGTGTCGCAC 59.416 50.0 0.58 0.58 0.00 5.34 F
1290 1303 0.179000 GTGAAGATGGTGCCGGAGAT 59.821 55.0 5.05 0.00 0.00 2.75 F
2038 2105 0.951040 AGGAGAGGCGCAAGTTTTCG 60.951 55.0 10.83 0.00 41.68 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2163 2232 1.200716 TGTACTTGCGTAGAGGGTTCG 59.799 52.381 0.00 0.00 0.00 3.95 R
2562 2631 0.105039 CGGATGGGTTCTGTAGAGCC 59.895 60.000 6.25 6.25 43.68 4.70 R
3268 3776 0.106918 AACTGAAAACGCTCACCCCA 60.107 50.000 0.00 0.00 0.00 4.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 133 1.541310 TTCGTTCTGGTGGATCCGCT 61.541 55.000 24.15 0.00 39.52 5.52
245 258 1.880340 CGCCAGATGACTCCGCTTC 60.880 63.158 0.00 0.00 0.00 3.86
251 264 0.755686 GATGACTCCGCTTCCCTGAT 59.244 55.000 0.00 0.00 0.00 2.90
275 288 0.584396 TGTTGGATTTCGTGTCGCAC 59.416 50.000 0.58 0.58 0.00 5.34
423 436 7.335924 GGCTGTTGACCAAATTGTAGTAAGATA 59.664 37.037 0.00 0.00 0.00 1.98
560 573 1.069049 AGGCTGTTGACCAAATTGCAC 59.931 47.619 0.00 0.00 0.00 4.57
561 574 1.069049 GGCTGTTGACCAAATTGCACT 59.931 47.619 0.00 0.00 0.00 4.40
562 575 2.295909 GGCTGTTGACCAAATTGCACTA 59.704 45.455 0.00 0.00 0.00 2.74
563 576 3.243704 GGCTGTTGACCAAATTGCACTAA 60.244 43.478 0.00 0.00 0.00 2.24
564 577 3.983344 GCTGTTGACCAAATTGCACTAAG 59.017 43.478 0.00 0.00 0.00 2.18
565 578 4.549458 CTGTTGACCAAATTGCACTAAGG 58.451 43.478 0.00 0.00 0.00 2.69
566 579 3.320541 TGTTGACCAAATTGCACTAAGGG 59.679 43.478 0.00 0.00 0.00 3.95
567 580 1.892474 TGACCAAATTGCACTAAGGGC 59.108 47.619 0.00 0.00 0.00 5.19
568 581 1.892474 GACCAAATTGCACTAAGGGCA 59.108 47.619 0.00 0.00 40.00 5.36
569 582 2.497273 GACCAAATTGCACTAAGGGCAT 59.503 45.455 0.00 0.00 41.58 4.40
570 583 2.234414 ACCAAATTGCACTAAGGGCATG 59.766 45.455 0.00 0.00 41.58 4.06
571 584 2.234414 CCAAATTGCACTAAGGGCATGT 59.766 45.455 0.00 0.00 41.58 3.21
572 585 3.446873 CCAAATTGCACTAAGGGCATGTA 59.553 43.478 0.00 0.00 41.58 2.29
573 586 4.423732 CAAATTGCACTAAGGGCATGTAC 58.576 43.478 0.00 0.00 41.58 2.90
574 587 2.869101 TTGCACTAAGGGCATGTACA 57.131 45.000 0.00 0.00 41.58 2.90
575 588 2.869101 TGCACTAAGGGCATGTACAA 57.131 45.000 0.00 0.00 36.11 2.41
576 589 3.364460 TGCACTAAGGGCATGTACAAT 57.636 42.857 0.00 0.00 36.11 2.71
577 590 3.016031 TGCACTAAGGGCATGTACAATG 58.984 45.455 0.00 0.12 36.11 2.82
578 591 3.278574 GCACTAAGGGCATGTACAATGA 58.721 45.455 0.00 0.00 0.00 2.57
579 592 3.885297 GCACTAAGGGCATGTACAATGAT 59.115 43.478 0.00 0.00 0.00 2.45
580 593 4.261322 GCACTAAGGGCATGTACAATGATG 60.261 45.833 0.00 0.00 0.00 3.07
581 594 3.885297 ACTAAGGGCATGTACAATGATGC 59.115 43.478 10.12 10.12 43.60 3.91
582 595 2.742428 AGGGCATGTACAATGATGCT 57.258 45.000 16.47 0.00 43.77 3.79
583 596 3.862877 AGGGCATGTACAATGATGCTA 57.137 42.857 16.47 0.00 43.77 3.49
584 597 4.377762 AGGGCATGTACAATGATGCTAT 57.622 40.909 16.47 5.35 43.77 2.97
585 598 4.330250 AGGGCATGTACAATGATGCTATC 58.670 43.478 16.47 8.57 43.77 2.08
586 599 4.042560 AGGGCATGTACAATGATGCTATCT 59.957 41.667 16.47 10.22 43.77 1.98
587 600 4.763793 GGGCATGTACAATGATGCTATCTT 59.236 41.667 16.47 0.00 43.77 2.40
588 601 5.939883 GGGCATGTACAATGATGCTATCTTA 59.060 40.000 16.47 0.00 43.77 2.10
589 602 6.430925 GGGCATGTACAATGATGCTATCTTAA 59.569 38.462 16.47 0.00 43.77 1.85
590 603 7.361542 GGGCATGTACAATGATGCTATCTTAAG 60.362 40.741 16.47 0.00 43.77 1.85
591 604 7.388776 GGCATGTACAATGATGCTATCTTAAGA 59.611 37.037 16.47 7.82 43.77 2.10
592 605 8.441608 GCATGTACAATGATGCTATCTTAAGAG 58.558 37.037 11.53 0.00 41.52 2.85
593 606 9.486497 CATGTACAATGATGCTATCTTAAGAGT 57.514 33.333 11.53 2.01 0.00 3.24
594 607 8.877808 TGTACAATGATGCTATCTTAAGAGTG 57.122 34.615 11.53 7.17 0.00 3.51
595 608 6.857777 ACAATGATGCTATCTTAAGAGTGC 57.142 37.500 19.50 19.50 0.00 4.40
596 609 5.762218 ACAATGATGCTATCTTAAGAGTGCC 59.238 40.000 21.91 12.64 0.00 5.01
597 610 5.557576 ATGATGCTATCTTAAGAGTGCCA 57.442 39.130 21.91 16.29 0.00 4.92
598 611 5.557576 TGATGCTATCTTAAGAGTGCCAT 57.442 39.130 21.91 15.73 0.00 4.40
599 612 5.303165 TGATGCTATCTTAAGAGTGCCATG 58.697 41.667 21.91 6.10 0.00 3.66
600 613 4.760530 TGCTATCTTAAGAGTGCCATGT 57.239 40.909 21.91 3.78 0.00 3.21
601 614 5.869649 TGCTATCTTAAGAGTGCCATGTA 57.130 39.130 21.91 7.37 0.00 2.29
602 615 5.847304 TGCTATCTTAAGAGTGCCATGTAG 58.153 41.667 21.91 12.89 0.00 2.74
603 616 5.221521 TGCTATCTTAAGAGTGCCATGTAGG 60.222 44.000 21.91 0.00 41.84 3.18
604 617 5.011125 GCTATCTTAAGAGTGCCATGTAGGA 59.989 44.000 11.53 0.00 41.22 2.94
605 618 6.295575 GCTATCTTAAGAGTGCCATGTAGGAT 60.296 42.308 11.53 0.00 41.22 3.24
606 619 7.093727 GCTATCTTAAGAGTGCCATGTAGGATA 60.094 40.741 11.53 0.00 41.22 2.59
607 620 7.618019 ATCTTAAGAGTGCCATGTAGGATAA 57.382 36.000 11.53 0.00 41.22 1.75
608 621 7.432148 TCTTAAGAGTGCCATGTAGGATAAA 57.568 36.000 0.00 0.00 41.22 1.40
609 622 8.034313 TCTTAAGAGTGCCATGTAGGATAAAT 57.966 34.615 0.00 0.00 41.22 1.40
610 623 7.933577 TCTTAAGAGTGCCATGTAGGATAAATG 59.066 37.037 0.00 0.00 41.22 2.32
611 624 5.894298 AGAGTGCCATGTAGGATAAATGA 57.106 39.130 0.00 0.00 38.63 2.57
612 625 6.445451 AGAGTGCCATGTAGGATAAATGAT 57.555 37.500 0.00 0.00 38.63 2.45
613 626 6.236409 AGAGTGCCATGTAGGATAAATGATG 58.764 40.000 0.00 0.00 38.63 3.07
614 627 6.043590 AGAGTGCCATGTAGGATAAATGATGA 59.956 38.462 0.00 0.00 38.63 2.92
615 628 6.236409 AGTGCCATGTAGGATAAATGATGAG 58.764 40.000 0.00 0.00 38.63 2.90
616 629 5.413833 GTGCCATGTAGGATAAATGATGAGG 59.586 44.000 0.00 0.00 38.63 3.86
617 630 5.073554 TGCCATGTAGGATAAATGATGAGGT 59.926 40.000 0.00 0.00 38.63 3.85
618 631 5.413833 GCCATGTAGGATAAATGATGAGGTG 59.586 44.000 0.00 0.00 38.63 4.00
619 632 5.942236 CCATGTAGGATAAATGATGAGGTGG 59.058 44.000 0.00 0.00 38.63 4.61
620 633 6.239973 CCATGTAGGATAAATGATGAGGTGGA 60.240 42.308 0.00 0.00 38.63 4.02
621 634 6.425210 TGTAGGATAAATGATGAGGTGGAG 57.575 41.667 0.00 0.00 0.00 3.86
622 635 4.989875 AGGATAAATGATGAGGTGGAGG 57.010 45.455 0.00 0.00 0.00 4.30
623 636 4.570926 AGGATAAATGATGAGGTGGAGGA 58.429 43.478 0.00 0.00 0.00 3.71
624 637 4.596643 AGGATAAATGATGAGGTGGAGGAG 59.403 45.833 0.00 0.00 0.00 3.69
625 638 4.594920 GGATAAATGATGAGGTGGAGGAGA 59.405 45.833 0.00 0.00 0.00 3.71
626 639 5.279910 GGATAAATGATGAGGTGGAGGAGAG 60.280 48.000 0.00 0.00 0.00 3.20
627 640 3.411454 AATGATGAGGTGGAGGAGAGA 57.589 47.619 0.00 0.00 0.00 3.10
628 641 2.450867 TGATGAGGTGGAGGAGAGAG 57.549 55.000 0.00 0.00 0.00 3.20
629 642 1.925959 TGATGAGGTGGAGGAGAGAGA 59.074 52.381 0.00 0.00 0.00 3.10
630 643 2.313041 TGATGAGGTGGAGGAGAGAGAA 59.687 50.000 0.00 0.00 0.00 2.87
631 644 2.223803 TGAGGTGGAGGAGAGAGAAC 57.776 55.000 0.00 0.00 0.00 3.01
632 645 1.713647 TGAGGTGGAGGAGAGAGAACT 59.286 52.381 0.00 0.00 0.00 3.01
633 646 2.291282 TGAGGTGGAGGAGAGAGAACTC 60.291 54.545 0.00 0.00 42.90 3.01
634 647 1.713647 AGGTGGAGGAGAGAGAACTCA 59.286 52.381 4.64 0.00 44.79 3.41
635 648 2.314549 AGGTGGAGGAGAGAGAACTCAT 59.685 50.000 4.64 0.00 44.79 2.90
636 649 3.529734 AGGTGGAGGAGAGAGAACTCATA 59.470 47.826 4.64 0.00 44.79 2.15
637 650 4.017037 AGGTGGAGGAGAGAGAACTCATAA 60.017 45.833 4.64 0.00 44.79 1.90
638 651 4.340950 GGTGGAGGAGAGAGAACTCATAAG 59.659 50.000 4.64 0.00 44.79 1.73
639 652 5.197451 GTGGAGGAGAGAGAACTCATAAGA 58.803 45.833 4.64 0.00 44.79 2.10
640 653 5.654650 GTGGAGGAGAGAGAACTCATAAGAA 59.345 44.000 4.64 0.00 44.79 2.52
641 654 6.153680 GTGGAGGAGAGAGAACTCATAAGAAA 59.846 42.308 4.64 0.00 44.79 2.52
642 655 6.726299 TGGAGGAGAGAGAACTCATAAGAAAA 59.274 38.462 4.64 0.00 44.79 2.29
643 656 7.093552 TGGAGGAGAGAGAACTCATAAGAAAAG 60.094 40.741 4.64 0.00 44.79 2.27
644 657 7.181569 AGGAGAGAGAACTCATAAGAAAAGG 57.818 40.000 4.64 0.00 44.79 3.11
645 658 5.815222 GGAGAGAGAACTCATAAGAAAAGGC 59.185 44.000 4.64 0.00 44.79 4.35
646 659 6.351796 GGAGAGAGAACTCATAAGAAAAGGCT 60.352 42.308 4.64 0.00 44.79 4.58
647 660 7.014988 AGAGAGAACTCATAAGAAAAGGCTT 57.985 36.000 0.00 0.00 44.79 4.35
648 661 6.878389 AGAGAGAACTCATAAGAAAAGGCTTG 59.122 38.462 0.00 0.00 44.79 4.01
649 662 6.538263 AGAGAACTCATAAGAAAAGGCTTGT 58.462 36.000 0.00 0.00 0.00 3.16
650 663 6.652900 AGAGAACTCATAAGAAAAGGCTTGTC 59.347 38.462 9.51 9.51 0.00 3.18
651 664 6.538263 AGAACTCATAAGAAAAGGCTTGTCT 58.462 36.000 14.33 14.33 0.00 3.41
652 665 7.001073 AGAACTCATAAGAAAAGGCTTGTCTT 58.999 34.615 30.04 30.04 35.77 3.01
653 666 6.809630 ACTCATAAGAAAAGGCTTGTCTTC 57.190 37.500 30.86 17.17 33.70 2.87
654 667 6.538263 ACTCATAAGAAAAGGCTTGTCTTCT 58.462 36.000 30.86 21.01 33.70 2.85
655 668 6.652900 ACTCATAAGAAAAGGCTTGTCTTCTC 59.347 38.462 30.86 8.39 33.70 2.87
656 669 6.773638 TCATAAGAAAAGGCTTGTCTTCTCT 58.226 36.000 30.86 16.87 33.70 3.10
657 670 7.227156 TCATAAGAAAAGGCTTGTCTTCTCTT 58.773 34.615 30.86 18.21 37.66 2.85
658 671 8.375506 TCATAAGAAAAGGCTTGTCTTCTCTTA 58.624 33.333 30.86 16.85 39.30 2.10
659 672 9.171877 CATAAGAAAAGGCTTGTCTTCTCTTAT 57.828 33.333 30.86 18.17 42.82 1.73
660 673 9.746457 ATAAGAAAAGGCTTGTCTTCTCTTATT 57.254 29.630 30.86 11.70 40.94 1.40
661 674 8.470657 AAGAAAAGGCTTGTCTTCTCTTATTT 57.529 30.769 23.96 2.07 33.68 1.40
662 675 9.574516 AAGAAAAGGCTTGTCTTCTCTTATTTA 57.425 29.630 23.96 0.00 33.68 1.40
663 676 9.574516 AGAAAAGGCTTGTCTTCTCTTATTTAA 57.425 29.630 14.33 0.00 0.00 1.52
664 677 9.833182 GAAAAGGCTTGTCTTCTCTTATTTAAG 57.167 33.333 10.26 0.00 34.65 1.85
665 678 9.574516 AAAAGGCTTGTCTTCTCTTATTTAAGA 57.425 29.630 0.00 0.44 39.82 2.10
666 679 9.746457 AAAGGCTTGTCTTCTCTTATTTAAGAT 57.254 29.630 0.00 0.00 41.12 2.40
693 706 9.453572 AAGACAAGAAATGATATCTTAGCACAA 57.546 29.630 3.98 0.00 35.43 3.33
694 707 9.624373 AGACAAGAAATGATATCTTAGCACAAT 57.376 29.630 3.98 0.00 35.43 2.71
710 723 4.481930 CACAATATGTGTCACCACGTTT 57.518 40.909 0.00 0.00 44.92 3.60
711 724 4.854399 CACAATATGTGTCACCACGTTTT 58.146 39.130 0.00 0.00 44.92 2.43
712 725 5.277825 CACAATATGTGTCACCACGTTTTT 58.722 37.500 0.00 0.00 44.92 1.94
713 726 6.431278 CACAATATGTGTCACCACGTTTTTA 58.569 36.000 0.00 0.00 44.92 1.52
714 727 6.577055 CACAATATGTGTCACCACGTTTTTAG 59.423 38.462 0.00 0.00 44.92 1.85
715 728 5.873179 ATATGTGTCACCACGTTTTTAGG 57.127 39.130 0.00 0.00 44.92 2.69
716 729 3.263489 TGTGTCACCACGTTTTTAGGA 57.737 42.857 0.00 0.00 44.92 2.94
717 730 3.607741 TGTGTCACCACGTTTTTAGGAA 58.392 40.909 0.00 0.00 44.92 3.36
718 731 4.200874 TGTGTCACCACGTTTTTAGGAAT 58.799 39.130 0.00 0.00 44.92 3.01
719 732 5.366460 TGTGTCACCACGTTTTTAGGAATA 58.634 37.500 0.00 0.00 44.92 1.75
720 733 5.821470 TGTGTCACCACGTTTTTAGGAATAA 59.179 36.000 0.00 0.00 44.92 1.40
721 734 6.138088 GTGTCACCACGTTTTTAGGAATAAC 58.862 40.000 0.00 0.00 0.00 1.89
722 735 6.017687 GTGTCACCACGTTTTTAGGAATAACT 60.018 38.462 0.00 0.00 0.00 2.24
723 736 7.171337 GTGTCACCACGTTTTTAGGAATAACTA 59.829 37.037 0.00 0.00 0.00 2.24
724 737 7.385752 TGTCACCACGTTTTTAGGAATAACTAG 59.614 37.037 0.00 0.00 0.00 2.57
725 738 7.386025 GTCACCACGTTTTTAGGAATAACTAGT 59.614 37.037 0.00 0.00 0.00 2.57
726 739 7.933033 TCACCACGTTTTTAGGAATAACTAGTT 59.067 33.333 13.68 13.68 0.00 2.24
727 740 9.206870 CACCACGTTTTTAGGAATAACTAGTTA 57.793 33.333 17.41 17.41 0.00 2.24
728 741 9.948964 ACCACGTTTTTAGGAATAACTAGTTAT 57.051 29.630 20.27 20.27 37.36 1.89
752 765 8.900983 ATGAAGATAAGGCTAAGAAATGACTC 57.099 34.615 0.00 0.00 0.00 3.36
753 766 7.851228 TGAAGATAAGGCTAAGAAATGACTCA 58.149 34.615 0.00 0.00 0.00 3.41
754 767 8.489489 TGAAGATAAGGCTAAGAAATGACTCAT 58.511 33.333 0.00 0.00 0.00 2.90
755 768 9.336171 GAAGATAAGGCTAAGAAATGACTCATT 57.664 33.333 0.00 0.00 35.39 2.57
756 769 8.674263 AGATAAGGCTAAGAAATGACTCATTG 57.326 34.615 4.99 0.00 34.04 2.82
757 770 8.270744 AGATAAGGCTAAGAAATGACTCATTGT 58.729 33.333 4.99 0.00 34.04 2.71
758 771 9.547753 GATAAGGCTAAGAAATGACTCATTGTA 57.452 33.333 4.99 0.00 34.04 2.41
759 772 7.856145 AAGGCTAAGAAATGACTCATTGTAG 57.144 36.000 4.99 8.44 34.04 2.74
760 773 7.187824 AGGCTAAGAAATGACTCATTGTAGA 57.812 36.000 4.99 0.00 34.04 2.59
761 774 7.044798 AGGCTAAGAAATGACTCATTGTAGAC 58.955 38.462 4.99 9.28 34.04 2.59
762 775 6.818644 GGCTAAGAAATGACTCATTGTAGACA 59.181 38.462 4.99 0.00 34.04 3.41
763 776 7.497249 GGCTAAGAAATGACTCATTGTAGACAT 59.503 37.037 4.99 0.00 34.04 3.06
764 777 8.547069 GCTAAGAAATGACTCATTGTAGACATC 58.453 37.037 4.99 0.00 34.04 3.06
765 778 9.814899 CTAAGAAATGACTCATTGTAGACATCT 57.185 33.333 4.99 0.36 34.04 2.90
767 780 9.512588 AAGAAATGACTCATTGTAGACATCTTT 57.487 29.630 4.99 0.00 34.04 2.52
768 781 9.512588 AGAAATGACTCATTGTAGACATCTTTT 57.487 29.630 4.99 0.00 34.04 2.27
794 807 9.844790 TTTTGTCATCTCTTAATTACATGCAAG 57.155 29.630 0.00 0.00 0.00 4.01
795 808 8.791327 TTGTCATCTCTTAATTACATGCAAGA 57.209 30.769 0.00 0.00 0.00 3.02
796 809 8.201554 TGTCATCTCTTAATTACATGCAAGAC 57.798 34.615 0.00 0.00 0.00 3.01
797 810 8.043113 TGTCATCTCTTAATTACATGCAAGACT 58.957 33.333 0.00 0.00 0.00 3.24
798 811 8.887717 GTCATCTCTTAATTACATGCAAGACTT 58.112 33.333 0.00 0.00 0.00 3.01
832 845 9.450807 GACTATTTTATCAACCATTGTACATGC 57.549 33.333 0.00 0.00 0.00 4.06
833 846 8.413229 ACTATTTTATCAACCATTGTACATGCC 58.587 33.333 0.00 0.00 0.00 4.40
834 847 5.590530 TTTATCAACCATTGTACATGCCC 57.409 39.130 0.00 0.00 0.00 5.36
911 924 6.195600 TGGAATTCCATCATCATCATCAGA 57.804 37.500 23.63 0.00 42.01 3.27
1144 1157 4.704833 CAGTCACAGGGCGGGTGG 62.705 72.222 7.22 0.00 36.90 4.61
1145 1158 4.954118 AGTCACAGGGCGGGTGGA 62.954 66.667 7.22 0.00 36.90 4.02
1146 1159 4.699522 GTCACAGGGCGGGTGGAC 62.700 72.222 7.22 2.09 36.90 4.02
1240 1253 2.666190 GCGGAGTTGCTGAGCACA 60.666 61.111 6.64 0.00 38.71 4.57
1290 1303 0.179000 GTGAAGATGGTGCCGGAGAT 59.821 55.000 5.05 0.00 0.00 2.75
1326 1339 1.925972 GCACCTCCCCCTCCTTCTT 60.926 63.158 0.00 0.00 0.00 2.52
1824 1882 4.122670 CATCCCCCTCCCCCTCCA 62.123 72.222 0.00 0.00 0.00 3.86
1939 1997 1.975407 GGTGGACGGAGAAGGACGA 60.975 63.158 0.00 0.00 0.00 4.20
1968 2026 1.810606 CTCTCTGTGTGCGTGGGAGT 61.811 60.000 0.00 0.00 0.00 3.85
1997 2055 3.506096 CAGCTGCTGGTGGCGATG 61.506 66.667 21.71 0.00 45.43 3.84
2000 2058 2.827190 CTGCTGGTGGCGATGCAT 60.827 61.111 0.00 0.00 45.43 3.96
2002 2060 2.332362 CTGCTGGTGGCGATGCATTC 62.332 60.000 0.00 0.00 45.43 2.67
2032 2099 3.479370 CGAAAGGAGAGGCGCAAG 58.521 61.111 10.83 0.00 43.44 4.01
2038 2105 0.951040 AGGAGAGGCGCAAGTTTTCG 60.951 55.000 10.83 0.00 41.68 3.46
2139 2208 3.444916 CCAAGTCAGCGAATACGTACAT 58.555 45.455 0.00 0.00 41.98 2.29
2172 2241 1.617357 ACGAACTAAAGCGAACCCTCT 59.383 47.619 0.00 0.00 0.00 3.69
2173 2242 2.821969 ACGAACTAAAGCGAACCCTCTA 59.178 45.455 0.00 0.00 0.00 2.43
2175 2244 2.935481 ACTAAAGCGAACCCTCTACG 57.065 50.000 0.00 0.00 0.00 3.51
2206 2275 4.571919 TGGACTGTAGTTCGGGTATTTTG 58.428 43.478 0.00 0.00 0.00 2.44
2212 2281 8.488651 ACTGTAGTTCGGGTATTTTGAAATAG 57.511 34.615 0.00 0.00 31.94 1.73
2268 2337 9.958180 TTGTGACCTATGATGAATTTTTCTCTA 57.042 29.630 0.00 0.00 0.00 2.43
2271 2340 9.481340 TGACCTATGATGAATTTTTCTCTATCG 57.519 33.333 0.00 0.00 0.00 2.92
2272 2341 9.482627 GACCTATGATGAATTTTTCTCTATCGT 57.517 33.333 0.00 0.00 0.00 3.73
2273 2342 9.838339 ACCTATGATGAATTTTTCTCTATCGTT 57.162 29.630 0.00 0.00 0.00 3.85
2281 2350 9.517609 TGAATTTTTCTCTATCGTTAGACTAGC 57.482 33.333 0.00 0.00 31.13 3.42
2282 2351 8.874744 AATTTTTCTCTATCGTTAGACTAGCC 57.125 34.615 0.00 0.00 31.13 3.93
2283 2352 7.400599 TTTTTCTCTATCGTTAGACTAGCCA 57.599 36.000 0.00 0.00 31.13 4.75
2284 2353 7.584122 TTTTCTCTATCGTTAGACTAGCCAT 57.416 36.000 0.00 0.00 31.13 4.40
2285 2354 8.687292 TTTTCTCTATCGTTAGACTAGCCATA 57.313 34.615 0.00 0.00 31.13 2.74
2286 2355 8.687292 TTTCTCTATCGTTAGACTAGCCATAA 57.313 34.615 0.00 0.00 31.13 1.90
2287 2356 8.865420 TTCTCTATCGTTAGACTAGCCATAAT 57.135 34.615 0.00 0.00 31.13 1.28
2288 2357 8.270080 TCTCTATCGTTAGACTAGCCATAATG 57.730 38.462 0.00 0.00 31.13 1.90
2289 2358 7.337184 TCTCTATCGTTAGACTAGCCATAATGG 59.663 40.741 0.00 0.00 34.01 3.16
2290 2359 4.866508 TCGTTAGACTAGCCATAATGGG 57.133 45.455 0.00 0.00 38.19 4.00
2291 2360 7.966427 TCTATCGTTAGACTAGCCATAATGGGT 60.966 40.741 0.00 0.00 39.44 4.51
2306 2375 9.216117 GCCATAATGGGTAGTAACATAAAGTAG 57.784 37.037 0.00 0.00 38.19 2.57
2314 2383 9.038803 GGGTAGTAACATAAAGTAGTAACATGC 57.961 37.037 0.00 0.00 0.00 4.06
2315 2384 9.813446 GGTAGTAACATAAAGTAGTAACATGCT 57.187 33.333 0.00 0.00 0.00 3.79
2336 2405 9.186323 CATGCTCATGTTACTACTCTATGTTAC 57.814 37.037 1.84 0.00 34.23 2.50
2337 2406 8.521170 TGCTCATGTTACTACTCTATGTTACT 57.479 34.615 0.00 0.00 0.00 2.24
2338 2407 9.623000 TGCTCATGTTACTACTCTATGTTACTA 57.377 33.333 0.00 0.00 0.00 1.82
2339 2408 9.881529 GCTCATGTTACTACTCTATGTTACTAC 57.118 37.037 0.00 0.00 0.00 2.73
2348 2417 8.991275 ACTACTCTATGTTACTACCTCTACAGT 58.009 37.037 0.00 0.00 0.00 3.55
2349 2418 9.263538 CTACTCTATGTTACTACCTCTACAGTG 57.736 40.741 0.00 0.00 0.00 3.66
2350 2419 7.055378 ACTCTATGTTACTACCTCTACAGTGG 58.945 42.308 0.00 0.00 34.99 4.00
2351 2420 6.363065 TCTATGTTACTACCTCTACAGTGGG 58.637 44.000 0.00 0.00 33.22 4.61
2352 2421 3.705051 TGTTACTACCTCTACAGTGGGG 58.295 50.000 0.00 0.00 33.22 4.96
2353 2422 3.334581 TGTTACTACCTCTACAGTGGGGA 59.665 47.826 0.00 0.00 33.22 4.81
2354 2423 2.830651 ACTACCTCTACAGTGGGGAG 57.169 55.000 0.00 1.36 33.22 4.30
2355 2424 2.001558 ACTACCTCTACAGTGGGGAGT 58.998 52.381 11.75 4.90 33.22 3.85
2356 2425 3.196300 ACTACCTCTACAGTGGGGAGTA 58.804 50.000 0.00 0.00 31.54 2.59
2357 2426 3.595138 ACTACCTCTACAGTGGGGAGTAA 59.405 47.826 0.00 0.00 31.54 2.24
2358 2427 2.817665 ACCTCTACAGTGGGGAGTAAC 58.182 52.381 11.75 0.00 33.22 2.50
2359 2428 2.111255 ACCTCTACAGTGGGGAGTAACA 59.889 50.000 11.75 0.00 33.22 2.41
2360 2429 3.246021 ACCTCTACAGTGGGGAGTAACAT 60.246 47.826 11.75 0.00 33.22 2.71
2361 2430 4.016851 ACCTCTACAGTGGGGAGTAACATA 60.017 45.833 11.75 0.00 33.22 2.29
2362 2431 5.148502 CCTCTACAGTGGGGAGTAACATAT 58.851 45.833 11.75 0.00 0.00 1.78
2363 2432 5.011125 CCTCTACAGTGGGGAGTAACATATG 59.989 48.000 0.00 0.00 0.00 1.78
2364 2433 5.525484 TCTACAGTGGGGAGTAACATATGT 58.475 41.667 1.41 1.41 0.00 2.29
2365 2434 6.675565 TCTACAGTGGGGAGTAACATATGTA 58.324 40.000 9.21 0.00 0.00 2.29
2366 2435 7.302948 TCTACAGTGGGGAGTAACATATGTAT 58.697 38.462 9.21 2.47 0.00 2.29
2367 2436 6.174720 ACAGTGGGGAGTAACATATGTATG 57.825 41.667 9.21 0.00 39.55 2.39
2368 2437 5.071788 ACAGTGGGGAGTAACATATGTATGG 59.928 44.000 9.21 0.00 38.00 2.74
2369 2438 5.071788 CAGTGGGGAGTAACATATGTATGGT 59.928 44.000 9.21 0.00 38.00 3.55
2370 2439 6.269077 CAGTGGGGAGTAACATATGTATGGTA 59.731 42.308 9.21 0.00 38.00 3.25
2371 2440 6.847567 AGTGGGGAGTAACATATGTATGGTAA 59.152 38.462 9.21 0.00 37.59 2.85
2372 2441 6.932960 GTGGGGAGTAACATATGTATGGTAAC 59.067 42.308 9.21 1.62 37.59 2.50
2412 2481 8.848474 TTATTAGGCTATAGACTCATTTTGCC 57.152 34.615 12.64 0.00 39.40 4.52
2414 2483 5.379706 AGGCTATAGACTCATTTTGCCTT 57.620 39.130 0.83 0.00 46.04 4.35
2415 2484 5.128919 AGGCTATAGACTCATTTTGCCTTG 58.871 41.667 0.83 0.00 46.04 3.61
2416 2485 5.104360 AGGCTATAGACTCATTTTGCCTTGA 60.104 40.000 0.83 0.00 46.04 3.02
2417 2486 5.767168 GGCTATAGACTCATTTTGCCTTGAT 59.233 40.000 3.21 0.00 36.52 2.57
2418 2487 6.936900 GGCTATAGACTCATTTTGCCTTGATA 59.063 38.462 3.21 0.00 36.52 2.15
2419 2488 7.609532 GGCTATAGACTCATTTTGCCTTGATAT 59.390 37.037 3.21 0.00 36.52 1.63
2420 2489 8.449397 GCTATAGACTCATTTTGCCTTGATATG 58.551 37.037 3.21 0.00 0.00 1.78
2421 2490 9.499479 CTATAGACTCATTTTGCCTTGATATGT 57.501 33.333 0.00 0.00 0.00 2.29
2422 2491 6.446781 AGACTCATTTTGCCTTGATATGTG 57.553 37.500 0.00 0.00 0.00 3.21
2423 2492 5.948162 AGACTCATTTTGCCTTGATATGTGT 59.052 36.000 0.00 0.00 0.00 3.72
2424 2493 5.957798 ACTCATTTTGCCTTGATATGTGTG 58.042 37.500 0.00 0.00 0.00 3.82
2425 2494 5.711506 ACTCATTTTGCCTTGATATGTGTGA 59.288 36.000 0.00 0.00 0.00 3.58
2426 2495 6.379133 ACTCATTTTGCCTTGATATGTGTGAT 59.621 34.615 0.00 0.00 0.00 3.06
2427 2496 6.566141 TCATTTTGCCTTGATATGTGTGATG 58.434 36.000 0.00 0.00 0.00 3.07
2428 2497 5.981088 TTTTGCCTTGATATGTGTGATGT 57.019 34.783 0.00 0.00 0.00 3.06
2429 2498 5.981088 TTTGCCTTGATATGTGTGATGTT 57.019 34.783 0.00 0.00 0.00 2.71
2430 2499 7.459795 TTTTGCCTTGATATGTGTGATGTTA 57.540 32.000 0.00 0.00 0.00 2.41
2431 2500 6.435430 TTGCCTTGATATGTGTGATGTTAC 57.565 37.500 0.00 0.00 0.00 2.50
2432 2501 5.744171 TGCCTTGATATGTGTGATGTTACT 58.256 37.500 0.00 0.00 0.00 2.24
2433 2502 5.817296 TGCCTTGATATGTGTGATGTTACTC 59.183 40.000 0.00 0.00 0.00 2.59
2434 2503 5.817296 GCCTTGATATGTGTGATGTTACTCA 59.183 40.000 0.00 0.00 0.00 3.41
2435 2504 6.484643 GCCTTGATATGTGTGATGTTACTCAT 59.515 38.462 0.00 0.00 38.11 2.90
2436 2505 7.657354 GCCTTGATATGTGTGATGTTACTCATA 59.343 37.037 0.00 0.00 39.73 2.15
2437 2506 8.982685 CCTTGATATGTGTGATGTTACTCATAC 58.017 37.037 0.00 5.35 38.84 2.39
2438 2507 9.755804 CTTGATATGTGTGATGTTACTCATACT 57.244 33.333 10.75 3.32 38.84 2.12
2444 2513 8.803397 TGTGTGATGTTACTCATACTAGTAGT 57.197 34.615 8.85 8.14 37.92 2.73
2445 2514 9.895138 TGTGTGATGTTACTCATACTAGTAGTA 57.105 33.333 12.38 12.38 37.92 1.82
2463 2532 9.334947 CTAGTAGTAACTAGCTATGTTACCACA 57.665 37.037 26.31 18.52 46.53 4.17
2464 2533 8.763984 AGTAGTAACTAGCTATGTTACCACAT 57.236 34.615 26.31 18.10 46.31 3.21
2465 2534 8.630917 AGTAGTAACTAGCTATGTTACCACATG 58.369 37.037 26.31 0.00 46.31 3.21
2466 2535 7.419711 AGTAACTAGCTATGTTACCACATGT 57.580 36.000 25.92 14.18 46.31 3.21
2467 2536 7.490000 AGTAACTAGCTATGTTACCACATGTC 58.510 38.462 25.92 11.54 46.31 3.06
2468 2537 6.546428 AACTAGCTATGTTACCACATGTCT 57.454 37.500 0.00 0.00 43.92 3.41
2469 2538 6.546428 ACTAGCTATGTTACCACATGTCTT 57.454 37.500 0.00 0.00 43.92 3.01
2470 2539 6.947464 ACTAGCTATGTTACCACATGTCTTT 58.053 36.000 0.00 0.00 43.92 2.52
2471 2540 7.394816 ACTAGCTATGTTACCACATGTCTTTT 58.605 34.615 0.00 0.00 43.92 2.27
2472 2541 7.883311 ACTAGCTATGTTACCACATGTCTTTTT 59.117 33.333 0.00 0.00 43.92 1.94
2505 2574 9.715121 ATTTATTGCTTGTCACATCATCTTTTT 57.285 25.926 0.00 0.00 0.00 1.94
2562 2631 0.604578 CCATTGTGGGCAGTCTTTGG 59.395 55.000 0.00 0.00 32.67 3.28
2563 2632 0.604578 CATTGTGGGCAGTCTTTGGG 59.395 55.000 0.00 0.00 0.00 4.12
2564 2633 1.187567 ATTGTGGGCAGTCTTTGGGC 61.188 55.000 0.00 0.00 0.00 5.36
2565 2634 2.116125 GTGGGCAGTCTTTGGGCT 59.884 61.111 0.00 0.00 0.00 5.19
2566 2635 1.973812 GTGGGCAGTCTTTGGGCTC 60.974 63.158 0.00 0.00 0.00 4.70
2567 2636 2.156098 TGGGCAGTCTTTGGGCTCT 61.156 57.895 0.00 0.00 0.00 4.09
2568 2637 0.840288 TGGGCAGTCTTTGGGCTCTA 60.840 55.000 0.00 0.00 0.00 2.43
2569 2638 0.393132 GGGCAGTCTTTGGGCTCTAC 60.393 60.000 0.00 0.00 0.00 2.59
2570 2639 0.324943 GGCAGTCTTTGGGCTCTACA 59.675 55.000 0.00 0.00 0.00 2.74
2571 2640 1.677217 GGCAGTCTTTGGGCTCTACAG 60.677 57.143 0.00 0.00 0.00 2.74
2572 2641 1.276421 GCAGTCTTTGGGCTCTACAGA 59.724 52.381 0.00 0.00 0.00 3.41
2573 2642 2.289694 GCAGTCTTTGGGCTCTACAGAA 60.290 50.000 0.00 0.00 0.00 3.02
2574 2643 3.330267 CAGTCTTTGGGCTCTACAGAAC 58.670 50.000 0.00 0.00 0.00 3.01
2575 2644 2.303311 AGTCTTTGGGCTCTACAGAACC 59.697 50.000 0.00 0.00 0.00 3.62
2581 2650 0.105039 GGCTCTACAGAACCCATCCG 59.895 60.000 0.00 0.00 0.00 4.18
2582 2651 1.112113 GCTCTACAGAACCCATCCGA 58.888 55.000 0.00 0.00 0.00 4.55
2583 2652 1.689273 GCTCTACAGAACCCATCCGAT 59.311 52.381 0.00 0.00 0.00 4.18
2584 2653 2.103263 GCTCTACAGAACCCATCCGATT 59.897 50.000 0.00 0.00 0.00 3.34
2585 2654 3.432326 GCTCTACAGAACCCATCCGATTT 60.432 47.826 0.00 0.00 0.00 2.17
2586 2655 4.770795 CTCTACAGAACCCATCCGATTTT 58.229 43.478 0.00 0.00 0.00 1.82
2587 2656 5.174037 TCTACAGAACCCATCCGATTTTT 57.826 39.130 0.00 0.00 0.00 1.94
2613 2682 3.821421 GAGGTAATCTCCCACGTTCAT 57.179 47.619 0.00 0.00 36.52 2.57
2614 2683 4.138487 GAGGTAATCTCCCACGTTCATT 57.862 45.455 0.00 0.00 36.52 2.57
2615 2684 5.272283 GAGGTAATCTCCCACGTTCATTA 57.728 43.478 0.00 0.00 36.52 1.90
2616 2685 5.667466 GAGGTAATCTCCCACGTTCATTAA 58.333 41.667 0.00 0.00 36.52 1.40
2617 2686 6.248569 AGGTAATCTCCCACGTTCATTAAT 57.751 37.500 0.00 0.00 0.00 1.40
2618 2687 7.369551 AGGTAATCTCCCACGTTCATTAATA 57.630 36.000 0.00 0.00 0.00 0.98
2619 2688 7.798071 AGGTAATCTCCCACGTTCATTAATAA 58.202 34.615 0.00 0.00 0.00 1.40
2620 2689 8.269317 AGGTAATCTCCCACGTTCATTAATAAA 58.731 33.333 0.00 0.00 0.00 1.40
2698 2767 5.941948 AACTCTAAAACCGTTGGATCTTG 57.058 39.130 0.00 0.00 0.00 3.02
2704 2773 4.729227 AAACCGTTGGATCTTGTTTGTT 57.271 36.364 0.00 0.00 0.00 2.83
2721 2790 9.352163 CTTGTTTGTTTTTAATATTCGTGCAAC 57.648 29.630 0.00 0.00 0.00 4.17
2723 2792 9.088512 TGTTTGTTTTTAATATTCGTGCAACTT 57.911 25.926 0.00 0.00 31.75 2.66
2724 2793 9.352163 GTTTGTTTTTAATATTCGTGCAACTTG 57.648 29.630 0.00 0.00 31.75 3.16
2725 2794 8.858003 TTGTTTTTAATATTCGTGCAACTTGA 57.142 26.923 0.00 0.00 31.75 3.02
2726 2795 9.469807 TTGTTTTTAATATTCGTGCAACTTGAT 57.530 25.926 0.00 0.00 31.75 2.57
2727 2796 9.469807 TGTTTTTAATATTCGTGCAACTTGATT 57.530 25.926 0.00 0.00 31.75 2.57
2728 2797 9.726034 GTTTTTAATATTCGTGCAACTTGATTG 57.274 29.630 0.00 0.00 41.69 2.67
2729 2798 9.469807 TTTTTAATATTCGTGCAACTTGATTGT 57.530 25.926 0.00 0.00 40.77 2.71
2730 2799 8.667987 TTTAATATTCGTGCAACTTGATTGTC 57.332 30.769 0.00 0.00 40.77 3.18
2731 2800 6.500684 AATATTCGTGCAACTTGATTGTCT 57.499 33.333 0.00 0.00 40.77 3.41
2740 2809 2.340246 CTTGATTGTCTCGCTCGCGC 62.340 60.000 0.00 0.00 39.59 6.86
2761 2830 1.002250 CTAGCTCGCGTGACGTTGTT 61.002 55.000 13.13 0.00 44.19 2.83
2826 2896 5.348997 CGGGCTGTTGTTTGTTTTTCTTTTA 59.651 36.000 0.00 0.00 0.00 1.52
2872 2945 0.834612 ACTTTGTCTCGGTTGTGGGA 59.165 50.000 0.00 0.00 0.00 4.37
2879 2952 0.606401 CTCGGTTGTGGGATGTTGCT 60.606 55.000 0.00 0.00 0.00 3.91
2885 2958 0.608856 TGTGGGATGTTGCTTCGCAT 60.609 50.000 5.40 0.00 38.76 4.73
2925 2999 0.591659 GTTTGTTCTTCGTGAGGGCC 59.408 55.000 0.00 0.00 0.00 5.80
2968 3042 1.143073 GTCAGTCCACACCCTTTCCTT 59.857 52.381 0.00 0.00 0.00 3.36
3021 3095 3.629796 GGGAGTGAGAAGGAAGGAGAGAT 60.630 52.174 0.00 0.00 0.00 2.75
3062 3136 4.070552 GGAGAGACGCCCGCACTT 62.071 66.667 0.00 0.00 0.00 3.16
3063 3137 2.811317 GAGAGACGCCCGCACTTG 60.811 66.667 0.00 0.00 0.00 3.16
3096 3171 1.133167 CCCCTCCCTTTTGTGTTCCTT 60.133 52.381 0.00 0.00 0.00 3.36
3210 3711 4.222145 TGTTAGAGATTCAGTGGGTGGTAC 59.778 45.833 0.00 0.00 0.00 3.34
3252 3760 2.375174 TCTAGTGTTTGCCCCAAGTCAT 59.625 45.455 0.00 0.00 0.00 3.06
3264 3772 4.384647 GCCCCAAGTCATACAGAGAGATTT 60.385 45.833 0.00 0.00 0.00 2.17
3268 3776 7.365117 CCCCAAGTCATACAGAGAGATTTAGTT 60.365 40.741 0.00 0.00 0.00 2.24
3283 3890 1.886886 TAGTTGGGGTGAGCGTTTTC 58.113 50.000 0.00 0.00 0.00 2.29
3316 3923 4.202284 GGCGTATTTAGACAGTGGGGATTA 60.202 45.833 0.00 0.00 0.00 1.75
3317 3924 5.362263 GCGTATTTAGACAGTGGGGATTAA 58.638 41.667 0.00 0.00 0.00 1.40
3319 3926 6.073222 GCGTATTTAGACAGTGGGGATTAATG 60.073 42.308 0.00 0.00 0.00 1.90
3320 3927 6.426937 CGTATTTAGACAGTGGGGATTAATGG 59.573 42.308 0.00 0.00 0.00 3.16
3321 3928 5.789574 TTTAGACAGTGGGGATTAATGGT 57.210 39.130 0.00 0.00 0.00 3.55
3322 3929 5.789574 TTAGACAGTGGGGATTAATGGTT 57.210 39.130 0.00 0.00 0.00 3.67
3323 3930 4.675063 AGACAGTGGGGATTAATGGTTT 57.325 40.909 0.00 0.00 0.00 3.27
3324 3931 5.010708 AGACAGTGGGGATTAATGGTTTT 57.989 39.130 0.00 0.00 0.00 2.43
3325 3932 5.402630 AGACAGTGGGGATTAATGGTTTTT 58.597 37.500 0.00 0.00 0.00 1.94
3326 3933 5.480422 AGACAGTGGGGATTAATGGTTTTTC 59.520 40.000 0.00 0.00 0.00 2.29
3439 4050 7.566760 TTGTGATTGTGTGAGAGTGTTTAAT 57.433 32.000 0.00 0.00 0.00 1.40
3464 4075 4.566837 ACAGGGGAGATCCATTATGTGTA 58.433 43.478 0.47 0.00 37.91 2.90
3470 4081 6.431234 GGGGAGATCCATTATGTGTAATTCAC 59.569 42.308 0.47 0.00 41.65 3.18
3667 4279 8.836413 TGAAGATAGTGGTAAGTTGTTTTTGAG 58.164 33.333 0.00 0.00 0.00 3.02
3737 4350 4.232221 GCACATGTTGGTGATTTCTCTTG 58.768 43.478 0.00 0.00 41.32 3.02
3750 6540 7.809806 GGTGATTTCTCTTGTAATCCACAAAAG 59.190 37.037 0.00 0.00 46.37 2.27
3782 6572 9.981460 AGTTTGTTAGATTTGAATCTTCCCTAT 57.019 29.630 11.17 0.00 42.96 2.57
3825 6616 7.468141 TTCTGATGTACTAGAGTGATGTGTT 57.532 36.000 0.00 0.00 0.00 3.32
3838 6629 5.237048 AGTGATGTGTTTTGTGCAACTTTT 58.763 33.333 0.00 0.00 38.04 2.27
3859 6650 7.658575 ACTTTTCGTGCCTAGAATACAAAACTA 59.341 33.333 0.00 0.00 0.00 2.24
4033 6831 6.793478 TCAAGTACAGTAGAGGGGTTAGTAA 58.207 40.000 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
190 191 1.659335 GACGGACGCACTTGAACGA 60.659 57.895 0.00 0.00 0.00 3.85
245 258 3.127548 CGAAATCCAACAGTGAATCAGGG 59.872 47.826 0.00 0.00 0.00 4.45
251 264 2.542178 CGACACGAAATCCAACAGTGAA 59.458 45.455 0.00 0.00 36.71 3.18
423 436 6.037610 GCAATTTAGTATGTACTCAGCTGCTT 59.962 38.462 9.47 0.00 37.73 3.91
560 573 4.139786 AGCATCATTGTACATGCCCTTAG 58.860 43.478 14.08 0.00 45.63 2.18
561 574 4.169059 AGCATCATTGTACATGCCCTTA 57.831 40.909 14.08 0.00 45.63 2.69
562 575 3.022557 AGCATCATTGTACATGCCCTT 57.977 42.857 14.08 0.00 45.63 3.95
563 576 2.742428 AGCATCATTGTACATGCCCT 57.258 45.000 14.08 0.00 45.63 5.19
564 577 4.330250 AGATAGCATCATTGTACATGCCC 58.670 43.478 14.08 5.86 45.63 5.36
565 578 5.954296 AAGATAGCATCATTGTACATGCC 57.046 39.130 14.08 1.71 45.63 4.40
566 579 8.315391 TCTTAAGATAGCATCATTGTACATGC 57.685 34.615 10.53 10.53 44.96 4.06
567 580 9.486497 ACTCTTAAGATAGCATCATTGTACATG 57.514 33.333 5.44 0.00 0.00 3.21
568 581 9.486497 CACTCTTAAGATAGCATCATTGTACAT 57.514 33.333 5.44 0.00 0.00 2.29
569 582 7.439356 GCACTCTTAAGATAGCATCATTGTACA 59.561 37.037 18.96 0.00 0.00 2.90
570 583 7.095439 GGCACTCTTAAGATAGCATCATTGTAC 60.095 40.741 22.91 4.48 0.00 2.90
571 584 6.931281 GGCACTCTTAAGATAGCATCATTGTA 59.069 38.462 22.91 0.00 0.00 2.41
572 585 5.762218 GGCACTCTTAAGATAGCATCATTGT 59.238 40.000 22.91 6.32 0.00 2.71
573 586 5.761726 TGGCACTCTTAAGATAGCATCATTG 59.238 40.000 22.91 5.79 0.00 2.82
574 587 5.933617 TGGCACTCTTAAGATAGCATCATT 58.066 37.500 22.91 0.00 0.00 2.57
575 588 5.557576 TGGCACTCTTAAGATAGCATCAT 57.442 39.130 22.91 0.00 0.00 2.45
576 589 5.163269 ACATGGCACTCTTAAGATAGCATCA 60.163 40.000 22.91 15.92 0.00 3.07
577 590 5.303971 ACATGGCACTCTTAAGATAGCATC 58.696 41.667 22.91 12.21 0.00 3.91
578 591 5.301835 ACATGGCACTCTTAAGATAGCAT 57.698 39.130 22.91 14.82 0.00 3.79
579 592 4.760530 ACATGGCACTCTTAAGATAGCA 57.239 40.909 22.91 13.69 0.00 3.49
580 593 5.011125 TCCTACATGGCACTCTTAAGATAGC 59.989 44.000 16.75 16.75 35.26 2.97
581 594 6.656632 TCCTACATGGCACTCTTAAGATAG 57.343 41.667 5.44 2.87 35.26 2.08
582 595 8.721133 TTATCCTACATGGCACTCTTAAGATA 57.279 34.615 5.44 0.00 35.26 1.98
583 596 7.618019 TTATCCTACATGGCACTCTTAAGAT 57.382 36.000 5.44 0.00 35.26 2.40
584 597 7.432148 TTTATCCTACATGGCACTCTTAAGA 57.568 36.000 4.81 4.81 35.26 2.10
585 598 7.933577 TCATTTATCCTACATGGCACTCTTAAG 59.066 37.037 0.00 0.00 35.26 1.85
586 599 7.801104 TCATTTATCCTACATGGCACTCTTAA 58.199 34.615 0.00 0.00 35.26 1.85
587 600 7.373617 TCATTTATCCTACATGGCACTCTTA 57.626 36.000 0.00 0.00 35.26 2.10
588 601 6.252599 TCATTTATCCTACATGGCACTCTT 57.747 37.500 0.00 0.00 35.26 2.85
589 602 5.894298 TCATTTATCCTACATGGCACTCT 57.106 39.130 0.00 0.00 35.26 3.24
590 603 6.233434 TCATCATTTATCCTACATGGCACTC 58.767 40.000 0.00 0.00 35.26 3.51
591 604 6.191657 TCATCATTTATCCTACATGGCACT 57.808 37.500 0.00 0.00 35.26 4.40
592 605 5.413833 CCTCATCATTTATCCTACATGGCAC 59.586 44.000 0.00 0.00 35.26 5.01
593 606 5.073554 ACCTCATCATTTATCCTACATGGCA 59.926 40.000 0.00 0.00 35.26 4.92
594 607 5.413833 CACCTCATCATTTATCCTACATGGC 59.586 44.000 0.00 0.00 35.26 4.40
595 608 5.942236 CCACCTCATCATTTATCCTACATGG 59.058 44.000 0.00 0.00 37.10 3.66
596 609 6.772605 TCCACCTCATCATTTATCCTACATG 58.227 40.000 0.00 0.00 0.00 3.21
597 610 6.013032 CCTCCACCTCATCATTTATCCTACAT 60.013 42.308 0.00 0.00 0.00 2.29
598 611 5.307976 CCTCCACCTCATCATTTATCCTACA 59.692 44.000 0.00 0.00 0.00 2.74
599 612 5.544176 TCCTCCACCTCATCATTTATCCTAC 59.456 44.000 0.00 0.00 0.00 3.18
600 613 5.726560 TCCTCCACCTCATCATTTATCCTA 58.273 41.667 0.00 0.00 0.00 2.94
601 614 4.570926 TCCTCCACCTCATCATTTATCCT 58.429 43.478 0.00 0.00 0.00 3.24
602 615 4.594920 TCTCCTCCACCTCATCATTTATCC 59.405 45.833 0.00 0.00 0.00 2.59
603 616 5.541868 TCTCTCCTCCACCTCATCATTTATC 59.458 44.000 0.00 0.00 0.00 1.75
604 617 5.471424 TCTCTCCTCCACCTCATCATTTAT 58.529 41.667 0.00 0.00 0.00 1.40
605 618 4.883759 TCTCTCCTCCACCTCATCATTTA 58.116 43.478 0.00 0.00 0.00 1.40
606 619 3.710677 CTCTCTCCTCCACCTCATCATTT 59.289 47.826 0.00 0.00 0.00 2.32
607 620 3.052262 TCTCTCTCCTCCACCTCATCATT 60.052 47.826 0.00 0.00 0.00 2.57
608 621 2.517553 TCTCTCTCCTCCACCTCATCAT 59.482 50.000 0.00 0.00 0.00 2.45
609 622 1.925959 TCTCTCTCCTCCACCTCATCA 59.074 52.381 0.00 0.00 0.00 3.07
610 623 2.693074 GTTCTCTCTCCTCCACCTCATC 59.307 54.545 0.00 0.00 0.00 2.92
611 624 2.314549 AGTTCTCTCTCCTCCACCTCAT 59.685 50.000 0.00 0.00 0.00 2.90
612 625 1.713647 AGTTCTCTCTCCTCCACCTCA 59.286 52.381 0.00 0.00 0.00 3.86
613 626 2.291282 TGAGTTCTCTCTCCTCCACCTC 60.291 54.545 1.53 0.00 40.98 3.85
614 627 1.713647 TGAGTTCTCTCTCCTCCACCT 59.286 52.381 1.53 0.00 40.98 4.00
615 628 2.223803 TGAGTTCTCTCTCCTCCACC 57.776 55.000 1.53 0.00 40.98 4.61
616 629 5.197451 TCTTATGAGTTCTCTCTCCTCCAC 58.803 45.833 1.53 0.00 40.98 4.02
617 630 5.458451 TCTTATGAGTTCTCTCTCCTCCA 57.542 43.478 1.53 0.00 40.98 3.86
618 631 6.783708 TTTCTTATGAGTTCTCTCTCCTCC 57.216 41.667 1.53 0.00 40.98 4.30
619 632 7.264947 CCTTTTCTTATGAGTTCTCTCTCCTC 58.735 42.308 1.53 0.00 40.98 3.71
620 633 6.351796 GCCTTTTCTTATGAGTTCTCTCTCCT 60.352 42.308 1.53 0.00 40.98 3.69
621 634 5.815222 GCCTTTTCTTATGAGTTCTCTCTCC 59.185 44.000 1.53 0.00 40.98 3.71
622 635 6.639563 AGCCTTTTCTTATGAGTTCTCTCTC 58.360 40.000 1.53 0.00 40.98 3.20
623 636 6.619329 AGCCTTTTCTTATGAGTTCTCTCT 57.381 37.500 1.53 0.00 40.98 3.10
624 637 6.652900 ACAAGCCTTTTCTTATGAGTTCTCTC 59.347 38.462 1.53 0.00 40.79 3.20
625 638 6.538263 ACAAGCCTTTTCTTATGAGTTCTCT 58.462 36.000 1.53 0.00 0.00 3.10
626 639 6.652900 AGACAAGCCTTTTCTTATGAGTTCTC 59.347 38.462 0.00 0.00 0.00 2.87
627 640 6.538263 AGACAAGCCTTTTCTTATGAGTTCT 58.462 36.000 0.00 0.00 0.00 3.01
628 641 6.809630 AGACAAGCCTTTTCTTATGAGTTC 57.190 37.500 0.00 0.00 0.00 3.01
629 642 7.001073 AGAAGACAAGCCTTTTCTTATGAGTT 58.999 34.615 5.86 0.00 29.54 3.01
630 643 6.538263 AGAAGACAAGCCTTTTCTTATGAGT 58.462 36.000 5.86 0.00 29.54 3.41
631 644 6.878389 AGAGAAGACAAGCCTTTTCTTATGAG 59.122 38.462 5.29 0.00 35.01 2.90
632 645 6.773638 AGAGAAGACAAGCCTTTTCTTATGA 58.226 36.000 5.29 0.00 35.01 2.15
633 646 7.446001 AAGAGAAGACAAGCCTTTTCTTATG 57.554 36.000 5.29 0.00 42.29 1.90
635 648 9.574516 AAATAAGAGAAGACAAGCCTTTTCTTA 57.425 29.630 5.86 14.67 45.53 2.10
636 649 8.470657 AAATAAGAGAAGACAAGCCTTTTCTT 57.529 30.769 5.57 5.57 44.56 2.52
637 650 9.574516 TTAAATAAGAGAAGACAAGCCTTTTCT 57.425 29.630 0.00 0.00 38.69 2.52
638 651 9.833182 CTTAAATAAGAGAAGACAAGCCTTTTC 57.167 33.333 0.00 0.00 35.33 2.29
639 652 9.574516 TCTTAAATAAGAGAAGACAAGCCTTTT 57.425 29.630 0.00 0.00 37.40 2.27
640 653 9.746457 ATCTTAAATAAGAGAAGACAAGCCTTT 57.254 29.630 8.68 0.00 44.67 3.11
667 680 9.453572 TTGTGCTAAGATATCATTTCTTGTCTT 57.546 29.630 5.32 0.00 35.19 3.01
668 681 9.624373 ATTGTGCTAAGATATCATTTCTTGTCT 57.376 29.630 5.32 0.00 35.19 3.41
698 711 6.056884 AGTTATTCCTAAAAACGTGGTGACA 58.943 36.000 0.00 0.00 38.70 3.58
699 712 6.549912 AGTTATTCCTAAAAACGTGGTGAC 57.450 37.500 0.00 0.00 0.00 3.67
700 713 7.444299 ACTAGTTATTCCTAAAAACGTGGTGA 58.556 34.615 0.00 0.00 0.00 4.02
701 714 7.662604 ACTAGTTATTCCTAAAAACGTGGTG 57.337 36.000 0.00 0.00 0.00 4.17
702 715 9.948964 ATAACTAGTTATTCCTAAAAACGTGGT 57.051 29.630 20.27 0.00 32.21 4.16
726 739 9.988815 GAGTCATTTCTTAGCCTTATCTTCATA 57.011 33.333 0.00 0.00 0.00 2.15
727 740 8.489489 TGAGTCATTTCTTAGCCTTATCTTCAT 58.511 33.333 0.00 0.00 0.00 2.57
728 741 7.851228 TGAGTCATTTCTTAGCCTTATCTTCA 58.149 34.615 0.00 0.00 0.00 3.02
729 742 8.900983 ATGAGTCATTTCTTAGCCTTATCTTC 57.099 34.615 0.00 0.00 0.00 2.87
730 743 9.118300 CAATGAGTCATTTCTTAGCCTTATCTT 57.882 33.333 15.85 0.00 31.05 2.40
731 744 8.270744 ACAATGAGTCATTTCTTAGCCTTATCT 58.729 33.333 15.85 0.00 31.05 1.98
732 745 8.443953 ACAATGAGTCATTTCTTAGCCTTATC 57.556 34.615 15.85 0.00 31.05 1.75
733 746 9.553064 CTACAATGAGTCATTTCTTAGCCTTAT 57.447 33.333 15.85 0.00 31.05 1.73
734 747 8.758829 TCTACAATGAGTCATTTCTTAGCCTTA 58.241 33.333 15.85 0.00 31.05 2.69
735 748 7.550906 GTCTACAATGAGTCATTTCTTAGCCTT 59.449 37.037 15.85 0.00 31.05 4.35
736 749 7.044798 GTCTACAATGAGTCATTTCTTAGCCT 58.955 38.462 15.85 0.00 31.05 4.58
737 750 6.818644 TGTCTACAATGAGTCATTTCTTAGCC 59.181 38.462 15.85 7.58 31.05 3.93
738 751 7.834068 TGTCTACAATGAGTCATTTCTTAGC 57.166 36.000 15.85 11.96 31.05 3.09
739 752 9.814899 AGATGTCTACAATGAGTCATTTCTTAG 57.185 33.333 15.85 15.04 31.05 2.18
741 754 9.512588 AAAGATGTCTACAATGAGTCATTTCTT 57.487 29.630 15.85 15.91 31.05 2.52
742 755 9.512588 AAAAGATGTCTACAATGAGTCATTTCT 57.487 29.630 15.85 11.18 31.05 2.52
768 781 9.844790 CTTGCATGTAATTAAGAGATGACAAAA 57.155 29.630 0.00 0.00 0.00 2.44
769 782 9.230122 TCTTGCATGTAATTAAGAGATGACAAA 57.770 29.630 0.00 0.00 0.00 2.83
770 783 8.668353 GTCTTGCATGTAATTAAGAGATGACAA 58.332 33.333 0.00 5.06 30.38 3.18
771 784 8.043113 AGTCTTGCATGTAATTAAGAGATGACA 58.957 33.333 0.00 0.00 30.38 3.58
772 785 8.430801 AGTCTTGCATGTAATTAAGAGATGAC 57.569 34.615 0.00 0.00 30.38 3.06
806 819 9.450807 GCATGTACAATGGTTGATAAAATAGTC 57.549 33.333 0.00 0.00 0.00 2.59
807 820 8.413229 GGCATGTACAATGGTTGATAAAATAGT 58.587 33.333 0.00 0.00 0.00 2.12
808 821 7.867403 GGGCATGTACAATGGTTGATAAAATAG 59.133 37.037 0.00 0.00 0.00 1.73
809 822 7.563188 AGGGCATGTACAATGGTTGATAAAATA 59.437 33.333 0.00 0.00 0.00 1.40
810 823 6.383726 AGGGCATGTACAATGGTTGATAAAAT 59.616 34.615 0.00 0.00 0.00 1.82
811 824 5.719085 AGGGCATGTACAATGGTTGATAAAA 59.281 36.000 0.00 0.00 0.00 1.52
812 825 5.268387 AGGGCATGTACAATGGTTGATAAA 58.732 37.500 0.00 0.00 0.00 1.40
813 826 4.865905 AGGGCATGTACAATGGTTGATAA 58.134 39.130 0.00 0.00 0.00 1.75
814 827 4.518278 AGGGCATGTACAATGGTTGATA 57.482 40.909 0.00 0.00 0.00 2.15
815 828 3.386932 AGGGCATGTACAATGGTTGAT 57.613 42.857 0.00 0.00 0.00 2.57
816 829 2.897271 AGGGCATGTACAATGGTTGA 57.103 45.000 0.00 0.00 0.00 3.18
817 830 4.269183 TCTTAGGGCATGTACAATGGTTG 58.731 43.478 0.00 0.00 0.00 3.77
818 831 4.584638 TCTTAGGGCATGTACAATGGTT 57.415 40.909 0.00 0.00 0.00 3.67
819 832 4.165950 TCATCTTAGGGCATGTACAATGGT 59.834 41.667 0.00 0.00 0.00 3.55
820 833 4.717877 TCATCTTAGGGCATGTACAATGG 58.282 43.478 0.00 0.00 0.00 3.16
821 834 4.214971 GCTCATCTTAGGGCATGTACAATG 59.785 45.833 0.00 0.12 0.00 2.82
822 835 4.141413 TGCTCATCTTAGGGCATGTACAAT 60.141 41.667 0.00 0.00 0.00 2.71
823 836 3.199727 TGCTCATCTTAGGGCATGTACAA 59.800 43.478 0.00 0.00 0.00 2.41
824 837 2.771372 TGCTCATCTTAGGGCATGTACA 59.229 45.455 0.00 0.00 0.00 2.90
825 838 3.397482 CTGCTCATCTTAGGGCATGTAC 58.603 50.000 0.00 0.00 34.12 2.90
826 839 2.224378 GCTGCTCATCTTAGGGCATGTA 60.224 50.000 0.00 0.00 34.12 2.29
827 840 1.476471 GCTGCTCATCTTAGGGCATGT 60.476 52.381 0.00 0.00 34.12 3.21
828 841 1.202782 AGCTGCTCATCTTAGGGCATG 60.203 52.381 0.00 0.00 34.12 4.06
829 842 1.138568 AGCTGCTCATCTTAGGGCAT 58.861 50.000 0.00 0.00 34.12 4.40
830 843 1.414181 GTAGCTGCTCATCTTAGGGCA 59.586 52.381 4.91 0.00 0.00 5.36
831 844 1.414181 TGTAGCTGCTCATCTTAGGGC 59.586 52.381 4.91 0.00 0.00 5.19
832 845 4.526262 AGTATGTAGCTGCTCATCTTAGGG 59.474 45.833 4.91 0.00 0.00 3.53
833 846 5.720371 AGTATGTAGCTGCTCATCTTAGG 57.280 43.478 4.91 0.00 0.00 2.69
834 847 9.534565 TTTTTAGTATGTAGCTGCTCATCTTAG 57.465 33.333 4.91 0.00 0.00 2.18
869 882 8.661352 AATTCCATTGTTTCGAACTGAATTTT 57.339 26.923 0.00 0.00 36.22 1.82
1175 1188 3.254166 GTCAAACATGTCCTGCAAGATGT 59.746 43.478 0.00 0.00 34.07 3.06
1290 1303 1.754621 CTGCCGGAGAGGAGCTACA 60.755 63.158 5.05 0.00 45.00 2.74
1824 1882 2.030562 CAAGTCGCCGTTGGAGGT 59.969 61.111 0.00 0.00 0.00 3.85
1939 1997 2.288702 GCACACAGAGAGACAGACACAT 60.289 50.000 0.00 0.00 0.00 3.21
1995 2053 1.451936 GCTCCTACCCCGAATGCAT 59.548 57.895 0.00 0.00 0.00 3.96
1996 2054 2.908015 GCTCCTACCCCGAATGCA 59.092 61.111 0.00 0.00 0.00 3.96
1997 2055 2.280186 CGCTCCTACCCCGAATGC 60.280 66.667 0.00 0.00 0.00 3.56
1998 2056 2.280186 GCGCTCCTACCCCGAATG 60.280 66.667 0.00 0.00 0.00 2.67
1999 2057 3.912907 CGCGCTCCTACCCCGAAT 61.913 66.667 5.56 0.00 0.00 3.34
2002 2060 4.137872 TTTCGCGCTCCTACCCCG 62.138 66.667 5.56 0.00 0.00 5.73
2003 2061 2.202892 CTTTCGCGCTCCTACCCC 60.203 66.667 5.56 0.00 0.00 4.95
2005 2063 1.227002 CTCCTTTCGCGCTCCTACC 60.227 63.158 5.56 0.00 0.00 3.18
2050 2118 4.739735 GCGTGGGTTAATACTACTGCATCT 60.740 45.833 0.00 0.00 0.00 2.90
2154 2223 3.177487 CGTAGAGGGTTCGCTTTAGTTC 58.823 50.000 0.00 0.00 0.00 3.01
2155 2224 2.673326 GCGTAGAGGGTTCGCTTTAGTT 60.673 50.000 0.00 0.00 45.29 2.24
2158 2227 3.727419 GCGTAGAGGGTTCGCTTTA 57.273 52.632 0.00 0.00 45.29 1.85
2163 2232 1.200716 TGTACTTGCGTAGAGGGTTCG 59.799 52.381 0.00 0.00 0.00 3.95
2172 2241 3.760151 ACTACAGTCCATGTACTTGCGTA 59.240 43.478 3.24 2.17 43.66 4.42
2173 2242 2.561419 ACTACAGTCCATGTACTTGCGT 59.439 45.455 3.24 1.21 43.66 5.24
2175 2244 3.612860 CGAACTACAGTCCATGTACTTGC 59.387 47.826 3.24 0.00 43.66 4.01
2186 2255 6.790285 TTTCAAAATACCCGAACTACAGTC 57.210 37.500 0.00 0.00 0.00 3.51
2206 2275 6.313164 GGCTGACACTTTAGTACCACTATTTC 59.687 42.308 0.00 0.00 29.64 2.17
2212 2281 3.326747 CTGGCTGACACTTTAGTACCAC 58.673 50.000 0.00 0.00 0.00 4.16
2268 2337 4.838986 ACCCATTATGGCTAGTCTAACGAT 59.161 41.667 5.57 0.00 35.79 3.73
2269 2338 4.220724 ACCCATTATGGCTAGTCTAACGA 58.779 43.478 5.57 0.00 35.79 3.85
2270 2339 4.602340 ACCCATTATGGCTAGTCTAACG 57.398 45.455 5.57 0.00 35.79 3.18
2271 2340 6.667558 ACTACCCATTATGGCTAGTCTAAC 57.332 41.667 12.19 0.00 35.79 2.34
2272 2341 7.785985 TGTTACTACCCATTATGGCTAGTCTAA 59.214 37.037 19.21 9.30 35.79 2.10
2273 2342 7.299896 TGTTACTACCCATTATGGCTAGTCTA 58.700 38.462 19.21 9.06 35.79 2.59
2274 2343 6.141083 TGTTACTACCCATTATGGCTAGTCT 58.859 40.000 19.21 3.07 35.79 3.24
2275 2344 6.415206 TGTTACTACCCATTATGGCTAGTC 57.585 41.667 19.21 9.50 35.79 2.59
2276 2345 8.500667 TTATGTTACTACCCATTATGGCTAGT 57.499 34.615 19.48 19.48 35.79 2.57
2277 2346 9.436957 CTTTATGTTACTACCCATTATGGCTAG 57.563 37.037 11.04 11.04 35.79 3.42
2278 2347 8.940982 ACTTTATGTTACTACCCATTATGGCTA 58.059 33.333 5.57 0.00 35.79 3.93
2279 2348 7.812306 ACTTTATGTTACTACCCATTATGGCT 58.188 34.615 5.57 0.00 35.79 4.75
2280 2349 9.216117 CTACTTTATGTTACTACCCATTATGGC 57.784 37.037 5.57 0.00 35.79 4.40
2288 2357 9.038803 GCATGTTACTACTTTATGTTACTACCC 57.961 37.037 0.00 0.00 0.00 3.69
2289 2358 9.813446 AGCATGTTACTACTTTATGTTACTACC 57.187 33.333 0.00 0.00 0.00 3.18
2310 2379 9.186323 GTAACATAGAGTAGTAACATGAGCATG 57.814 37.037 8.82 8.82 44.15 4.06
2311 2380 9.137459 AGTAACATAGAGTAGTAACATGAGCAT 57.863 33.333 0.00 0.00 0.00 3.79
2312 2381 8.521170 AGTAACATAGAGTAGTAACATGAGCA 57.479 34.615 0.00 0.00 0.00 4.26
2313 2382 9.881529 GTAGTAACATAGAGTAGTAACATGAGC 57.118 37.037 0.00 0.00 0.00 4.26
2322 2391 8.991275 ACTGTAGAGGTAGTAACATAGAGTAGT 58.009 37.037 0.00 0.00 0.00 2.73
2323 2392 9.263538 CACTGTAGAGGTAGTAACATAGAGTAG 57.736 40.741 1.47 0.00 0.00 2.57
2324 2393 8.209584 CCACTGTAGAGGTAGTAACATAGAGTA 58.790 40.741 1.47 0.00 0.00 2.59
2325 2394 7.055378 CCACTGTAGAGGTAGTAACATAGAGT 58.945 42.308 0.00 0.00 0.00 3.24
2326 2395 6.487331 CCCACTGTAGAGGTAGTAACATAGAG 59.513 46.154 0.00 0.00 0.00 2.43
2327 2396 6.363065 CCCACTGTAGAGGTAGTAACATAGA 58.637 44.000 0.00 0.00 0.00 1.98
2328 2397 5.535406 CCCCACTGTAGAGGTAGTAACATAG 59.465 48.000 0.00 0.00 0.00 2.23
2329 2398 5.194334 TCCCCACTGTAGAGGTAGTAACATA 59.806 44.000 0.00 0.00 0.00 2.29
2330 2399 4.016851 TCCCCACTGTAGAGGTAGTAACAT 60.017 45.833 0.00 0.00 0.00 2.71
2331 2400 3.334581 TCCCCACTGTAGAGGTAGTAACA 59.665 47.826 0.00 0.00 0.00 2.41
2332 2401 3.952967 CTCCCCACTGTAGAGGTAGTAAC 59.047 52.174 0.00 0.00 0.00 2.50
2333 2402 3.595138 ACTCCCCACTGTAGAGGTAGTAA 59.405 47.826 6.62 0.00 31.70 2.24
2334 2403 3.196300 ACTCCCCACTGTAGAGGTAGTA 58.804 50.000 6.62 0.00 31.70 1.82
2335 2404 2.001558 ACTCCCCACTGTAGAGGTAGT 58.998 52.381 6.62 0.00 31.70 2.73
2336 2405 2.830651 ACTCCCCACTGTAGAGGTAG 57.169 55.000 6.62 0.00 31.70 3.18
2337 2406 3.334581 TGTTACTCCCCACTGTAGAGGTA 59.665 47.826 6.62 0.00 31.70 3.08
2338 2407 2.111255 TGTTACTCCCCACTGTAGAGGT 59.889 50.000 6.62 0.00 31.70 3.85
2339 2408 2.816411 TGTTACTCCCCACTGTAGAGG 58.184 52.381 6.62 0.00 31.70 3.69
2340 2409 5.598830 ACATATGTTACTCCCCACTGTAGAG 59.401 44.000 1.41 1.43 0.00 2.43
2341 2410 5.525484 ACATATGTTACTCCCCACTGTAGA 58.475 41.667 1.41 0.00 0.00 2.59
2342 2411 5.871396 ACATATGTTACTCCCCACTGTAG 57.129 43.478 1.41 0.00 0.00 2.74
2343 2412 6.269077 CCATACATATGTTACTCCCCACTGTA 59.731 42.308 14.77 0.00 31.82 2.74
2344 2413 5.071788 CCATACATATGTTACTCCCCACTGT 59.928 44.000 14.77 0.00 31.82 3.55
2345 2414 5.071788 ACCATACATATGTTACTCCCCACTG 59.928 44.000 14.77 0.00 31.82 3.66
2346 2415 5.224441 ACCATACATATGTTACTCCCCACT 58.776 41.667 14.77 0.00 31.82 4.00
2347 2416 5.562298 ACCATACATATGTTACTCCCCAC 57.438 43.478 14.77 0.00 31.82 4.61
2348 2417 6.616137 TGTTACCATACATATGTTACTCCCCA 59.384 38.462 14.77 1.81 31.82 4.96
2349 2418 7.069877 TGTTACCATACATATGTTACTCCCC 57.930 40.000 14.77 0.00 31.82 4.81
2350 2419 8.154856 ACATGTTACCATACATATGTTACTCCC 58.845 37.037 14.77 0.00 36.64 4.30
2356 2425 9.899661 AGTGTTACATGTTACCATACATATGTT 57.100 29.630 14.77 0.00 36.64 2.71
2357 2426 9.899661 AAGTGTTACATGTTACCATACATATGT 57.100 29.630 13.93 13.93 36.64 2.29
2386 2455 9.284968 GGCAAAATGAGTCTATAGCCTAATAAA 57.715 33.333 0.00 0.00 37.89 1.40
2387 2456 8.848474 GGCAAAATGAGTCTATAGCCTAATAA 57.152 34.615 0.00 0.00 37.89 1.40
2393 2462 5.126067 TCAAGGCAAAATGAGTCTATAGCC 58.874 41.667 0.00 0.00 41.08 3.93
2394 2463 6.874288 ATCAAGGCAAAATGAGTCTATAGC 57.126 37.500 0.00 0.00 0.00 2.97
2395 2464 9.499479 ACATATCAAGGCAAAATGAGTCTATAG 57.501 33.333 0.00 0.00 0.00 1.31
2396 2465 9.276590 CACATATCAAGGCAAAATGAGTCTATA 57.723 33.333 0.00 0.00 0.00 1.31
2397 2466 7.776969 ACACATATCAAGGCAAAATGAGTCTAT 59.223 33.333 0.00 0.00 0.00 1.98
2398 2467 7.066163 CACACATATCAAGGCAAAATGAGTCTA 59.934 37.037 0.00 0.00 0.00 2.59
2399 2468 5.948162 ACACATATCAAGGCAAAATGAGTCT 59.052 36.000 0.00 0.00 0.00 3.24
2400 2469 6.032094 CACACATATCAAGGCAAAATGAGTC 58.968 40.000 0.00 0.00 0.00 3.36
2401 2470 5.711506 TCACACATATCAAGGCAAAATGAGT 59.288 36.000 0.00 0.00 0.00 3.41
2402 2471 6.198650 TCACACATATCAAGGCAAAATGAG 57.801 37.500 0.00 0.00 0.00 2.90
2403 2472 6.153170 ACATCACACATATCAAGGCAAAATGA 59.847 34.615 0.00 0.00 0.00 2.57
2404 2473 6.334989 ACATCACACATATCAAGGCAAAATG 58.665 36.000 0.00 0.00 0.00 2.32
2405 2474 6.534475 ACATCACACATATCAAGGCAAAAT 57.466 33.333 0.00 0.00 0.00 1.82
2406 2475 5.981088 ACATCACACATATCAAGGCAAAA 57.019 34.783 0.00 0.00 0.00 2.44
2407 2476 5.981088 AACATCACACATATCAAGGCAAA 57.019 34.783 0.00 0.00 0.00 3.68
2408 2477 6.179756 AGTAACATCACACATATCAAGGCAA 58.820 36.000 0.00 0.00 0.00 4.52
2409 2478 5.744171 AGTAACATCACACATATCAAGGCA 58.256 37.500 0.00 0.00 0.00 4.75
2410 2479 5.817296 TGAGTAACATCACACATATCAAGGC 59.183 40.000 0.00 0.00 0.00 4.35
2411 2480 8.982685 GTATGAGTAACATCACACATATCAAGG 58.017 37.037 0.00 0.00 40.07 3.61
2412 2481 9.755804 AGTATGAGTAACATCACACATATCAAG 57.244 33.333 0.00 0.00 40.07 3.02
2418 2487 9.409918 ACTACTAGTATGAGTAACATCACACAT 57.590 33.333 2.33 0.00 40.07 3.21
2419 2488 8.803397 ACTACTAGTATGAGTAACATCACACA 57.197 34.615 2.33 0.00 40.07 3.72
2479 2548 9.715121 AAAAAGATGATGTGACAAGCAATAAAT 57.285 25.926 0.00 0.00 0.00 1.40
2543 2612 0.604578 CCAAAGACTGCCCACAATGG 59.395 55.000 0.00 0.00 37.25 3.16
2544 2613 0.604578 CCCAAAGACTGCCCACAATG 59.395 55.000 0.00 0.00 0.00 2.82
2545 2614 1.187567 GCCCAAAGACTGCCCACAAT 61.188 55.000 0.00 0.00 0.00 2.71
2546 2615 1.832167 GCCCAAAGACTGCCCACAA 60.832 57.895 0.00 0.00 0.00 3.33
2547 2616 2.203480 GCCCAAAGACTGCCCACA 60.203 61.111 0.00 0.00 0.00 4.17
2548 2617 1.973812 GAGCCCAAAGACTGCCCAC 60.974 63.158 0.00 0.00 0.00 4.61
2549 2618 0.840288 TAGAGCCCAAAGACTGCCCA 60.840 55.000 0.00 0.00 0.00 5.36
2550 2619 0.393132 GTAGAGCCCAAAGACTGCCC 60.393 60.000 0.00 0.00 0.00 5.36
2551 2620 0.324943 TGTAGAGCCCAAAGACTGCC 59.675 55.000 0.00 0.00 0.00 4.85
2552 2621 1.276421 TCTGTAGAGCCCAAAGACTGC 59.724 52.381 0.00 0.00 0.00 4.40
2553 2622 3.330267 GTTCTGTAGAGCCCAAAGACTG 58.670 50.000 0.00 0.00 0.00 3.51
2554 2623 2.303311 GGTTCTGTAGAGCCCAAAGACT 59.697 50.000 3.61 0.00 39.22 3.24
2555 2624 2.701107 GGTTCTGTAGAGCCCAAAGAC 58.299 52.381 3.61 0.00 39.22 3.01
2562 2631 0.105039 CGGATGGGTTCTGTAGAGCC 59.895 60.000 6.25 6.25 43.68 4.70
2563 2632 1.112113 TCGGATGGGTTCTGTAGAGC 58.888 55.000 0.00 0.00 32.10 4.09
2564 2633 4.408182 AAATCGGATGGGTTCTGTAGAG 57.592 45.455 0.00 0.00 32.10 2.43
2565 2634 4.837093 AAAATCGGATGGGTTCTGTAGA 57.163 40.909 0.00 0.00 32.10 2.59
2593 2662 3.821421 ATGAACGTGGGAGATTACCTC 57.179 47.619 0.00 0.00 41.22 3.85
2594 2663 5.687166 TTAATGAACGTGGGAGATTACCT 57.313 39.130 0.00 0.00 0.00 3.08
2595 2664 8.441312 TTTATTAATGAACGTGGGAGATTACC 57.559 34.615 0.00 0.00 0.00 2.85
2598 2667 9.184523 TCAATTTATTAATGAACGTGGGAGATT 57.815 29.630 0.00 0.00 0.00 2.40
2599 2668 8.746052 TCAATTTATTAATGAACGTGGGAGAT 57.254 30.769 0.00 0.00 0.00 2.75
2600 2669 8.568676 TTCAATTTATTAATGAACGTGGGAGA 57.431 30.769 0.00 0.00 0.00 3.71
2601 2670 9.632807 TTTTCAATTTATTAATGAACGTGGGAG 57.367 29.630 0.00 0.00 0.00 4.30
2602 2671 9.982651 TTTTTCAATTTATTAATGAACGTGGGA 57.017 25.926 0.00 0.00 0.00 4.37
2618 2687 9.171877 TGAAATAGCAAACCTGTTTTTCAATTT 57.828 25.926 4.99 4.26 35.35 1.82
2619 2688 8.611757 GTGAAATAGCAAACCTGTTTTTCAATT 58.388 29.630 7.86 0.00 35.35 2.32
2620 2689 7.768120 TGTGAAATAGCAAACCTGTTTTTCAAT 59.232 29.630 7.86 0.00 35.35 2.57
2623 2692 7.653311 AGATGTGAAATAGCAAACCTGTTTTTC 59.347 33.333 0.00 0.00 35.35 2.29
2681 2750 5.838531 ACAAACAAGATCCAACGGTTTTA 57.161 34.783 0.00 0.00 29.89 1.52
2683 2752 4.729227 AACAAACAAGATCCAACGGTTT 57.271 36.364 0.00 0.00 32.33 3.27
2698 2767 9.352163 CAAGTTGCACGAATATTAAAAACAAAC 57.648 29.630 0.00 0.00 0.00 2.93
2704 2773 9.123709 GACAATCAAGTTGCACGAATATTAAAA 57.876 29.630 0.00 0.00 41.69 1.52
2721 2790 1.627943 CGCGAGCGAGACAATCAAG 59.372 57.895 12.58 0.00 42.83 3.02
2750 2819 4.659874 GCGCCCAACAACGTCACG 62.660 66.667 0.00 0.00 0.00 4.35
2826 2896 1.241315 CCCACCAGCCGAAAAATCGT 61.241 55.000 0.00 0.00 0.00 3.73
2879 2952 1.806542 GGTGCTGAGAGAAAATGCGAA 59.193 47.619 0.00 0.00 0.00 4.70
2885 2958 2.341846 AAACGGGTGCTGAGAGAAAA 57.658 45.000 0.00 0.00 0.00 2.29
2968 3042 2.902457 GCCTGGAACCCCTTCGGAA 61.902 63.158 0.00 0.00 34.64 4.30
3000 3074 3.094484 TCTCTCCTTCCTTCTCACTCC 57.906 52.381 0.00 0.00 0.00 3.85
3021 3095 4.069232 CTCACTTCGCTGCGGGGA 62.069 66.667 23.03 12.52 0.00 4.81
3062 3136 2.844348 GGGAGGGGAAATTACTCACTCA 59.156 50.000 7.04 0.00 32.03 3.41
3063 3137 3.116174 AGGGAGGGGAAATTACTCACTC 58.884 50.000 0.00 0.00 40.85 3.51
3210 3711 0.880278 CATGTATCAACTCCCGGGCG 60.880 60.000 18.49 13.88 0.00 6.13
3252 3760 5.338632 TCACCCCAACTAAATCTCTCTGTA 58.661 41.667 0.00 0.00 0.00 2.74
3264 3772 1.141254 TGAAAACGCTCACCCCAACTA 59.859 47.619 0.00 0.00 0.00 2.24
3268 3776 0.106918 AACTGAAAACGCTCACCCCA 60.107 50.000 0.00 0.00 0.00 4.96
3283 3890 4.688879 TGTCTAAATACGCCAACTGAACTG 59.311 41.667 0.00 0.00 0.00 3.16
3316 3923 6.045106 TCCCCACTACTAAGAGAAAAACCATT 59.955 38.462 0.00 0.00 0.00 3.16
3317 3924 5.550403 TCCCCACTACTAAGAGAAAAACCAT 59.450 40.000 0.00 0.00 0.00 3.55
3319 3926 5.494390 TCCCCACTACTAAGAGAAAAACC 57.506 43.478 0.00 0.00 0.00 3.27
3320 3927 5.880887 CCATCCCCACTACTAAGAGAAAAAC 59.119 44.000 0.00 0.00 0.00 2.43
3321 3928 5.045140 CCCATCCCCACTACTAAGAGAAAAA 60.045 44.000 0.00 0.00 0.00 1.94
3322 3929 4.473559 CCCATCCCCACTACTAAGAGAAAA 59.526 45.833 0.00 0.00 0.00 2.29
3323 3930 4.037927 CCCATCCCCACTACTAAGAGAAA 58.962 47.826 0.00 0.00 0.00 2.52
3324 3931 3.632645 CCCCATCCCCACTACTAAGAGAA 60.633 52.174 0.00 0.00 0.00 2.87
3325 3932 2.090719 CCCCATCCCCACTACTAAGAGA 60.091 54.545 0.00 0.00 0.00 3.10
3326 3933 2.090719 TCCCCATCCCCACTACTAAGAG 60.091 54.545 0.00 0.00 0.00 2.85
3439 4050 4.840680 CACATAATGGATCTCCCCTGTCTA 59.159 45.833 0.00 0.00 34.29 2.59
3470 4081 9.046296 ACACAACTTAGTTTCAGAGATACAAAG 57.954 33.333 0.00 0.00 0.00 2.77
3737 4350 7.882179 ACAAACTGATACCTTTTGTGGATTAC 58.118 34.615 0.00 0.00 40.95 1.89
3802 6593 7.468141 AAACACATCACTCTAGTACATCAGA 57.532 36.000 0.00 0.00 0.00 3.27
3825 6616 1.203523 AGGCACGAAAAGTTGCACAAA 59.796 42.857 0.00 0.00 0.00 2.83
3838 6629 5.186409 AGGTAGTTTTGTATTCTAGGCACGA 59.814 40.000 0.00 0.00 0.00 4.35
3859 6650 5.265191 TCTAGAGACACTTGAATAGCAGGT 58.735 41.667 0.00 0.00 37.28 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.