Multiple sequence alignment - TraesCS2A01G146800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G146800 chr2A 100.000 6102 0 0 1 6102 92341470 92335369 0.000000e+00 11269.0
1 TraesCS2A01G146800 chr2B 93.258 3115 156 32 690 3769 146639127 146636032 0.000000e+00 4540.0
2 TraesCS2A01G146800 chr2B 89.393 1631 123 25 3811 5398 146636029 146634406 0.000000e+00 2008.0
3 TraesCS2A01G146800 chr2B 88.494 704 67 9 1 697 146640091 146639395 0.000000e+00 839.0
4 TraesCS2A01G146800 chr2B 91.503 459 29 6 4948 5398 146615262 146614806 1.870000e-174 623.0
5 TraesCS2A01G146800 chr2B 94.481 308 17 0 5410 5717 247928363 247928670 5.530000e-130 475.0
6 TraesCS2A01G146800 chr2B 82.254 417 27 18 5717 6100 146634405 146634003 3.550000e-82 316.0
7 TraesCS2A01G146800 chr2B 89.952 209 18 3 5895 6100 146614598 146614390 3.630000e-67 267.0
8 TraesCS2A01G146800 chr2B 91.713 181 14 1 5717 5896 146614805 146614625 3.650000e-62 250.0
9 TraesCS2A01G146800 chr2B 96.063 127 5 0 4827 4953 146627939 146627813 2.230000e-49 207.0
10 TraesCS2A01G146800 chr2B 90.909 55 5 0 6046 6100 714732124 714732178 2.360000e-09 75.0
11 TraesCS2A01G146800 chr2D 92.497 2679 131 27 184 2834 94342715 94340079 0.000000e+00 3770.0
12 TraesCS2A01G146800 chr2D 89.227 1578 110 38 3810 5355 94339170 94337621 0.000000e+00 1917.0
13 TraesCS2A01G146800 chr2D 91.494 917 59 12 2863 3771 94340081 94339176 0.000000e+00 1243.0
14 TraesCS2A01G146800 chr2D 94.805 308 16 0 5408 5715 76640744 76640437 1.190000e-131 481.0
15 TraesCS2A01G146800 chr7D 95.469 309 14 0 5408 5716 444356923 444357231 1.530000e-135 494.0
16 TraesCS2A01G146800 chr7D 75.377 199 36 10 5711 5896 20684392 20684590 3.920000e-12 84.2
17 TraesCS2A01G146800 chr7D 94.118 34 2 0 5991 6024 602909457 602909490 1.100000e-02 52.8
18 TraesCS2A01G146800 chr3A 94.586 314 16 1 5410 5722 661627006 661627319 9.200000e-133 484.0
19 TraesCS2A01G146800 chr6D 94.771 306 16 0 5409 5714 208915057 208914752 1.540000e-130 477.0
20 TraesCS2A01G146800 chr3D 94.498 309 17 0 5410 5718 161622691 161622999 1.540000e-130 477.0
21 TraesCS2A01G146800 chr1D 94.498 309 17 0 5408 5716 205084203 205083895 1.540000e-130 477.0
22 TraesCS2A01G146800 chr1D 94.481 308 17 0 5409 5716 361354651 361354958 5.530000e-130 475.0
23 TraesCS2A01G146800 chr1D 80.000 145 20 5 5759 5896 214065509 214065651 1.400000e-16 99.0
24 TraesCS2A01G146800 chr1A 94.194 310 17 1 5409 5717 281230689 281230380 7.160000e-129 472.0
25 TraesCS2A01G146800 chr1A 79.720 143 21 4 5761 5896 271582183 271582324 5.030000e-16 97.1
26 TraesCS2A01G146800 chr4A 92.357 314 22 2 5409 5721 729733087 729733399 4.340000e-121 446.0
27 TraesCS2A01G146800 chr4A 91.083 314 27 1 5410 5723 492536700 492537012 2.030000e-114 424.0
28 TraesCS2A01G146800 chr4A 89.457 313 23 2 5410 5721 35233355 35233052 2.670000e-103 387.0
29 TraesCS2A01G146800 chr4A 80.420 143 18 8 5761 5896 3866204 3866343 3.890000e-17 100.0
30 TraesCS2A01G146800 chr4A 79.720 143 19 7 5761 5896 3847259 3847398 1.810000e-15 95.3
31 TraesCS2A01G146800 chr7A 91.613 310 25 1 5409 5718 521569953 521570261 1.570000e-115 427.0
32 TraesCS2A01G146800 chr7A 90.705 312 27 2 5409 5720 209408911 209408602 1.220000e-111 414.0
33 TraesCS2A01G146800 chr7A 90.705 312 27 2 5410 5720 491969742 491969432 1.220000e-111 414.0
34 TraesCS2A01G146800 chr1B 82.759 145 16 4 5759 5896 307001735 307001877 2.990000e-23 121.0
35 TraesCS2A01G146800 chr7B 79.433 141 27 1 5758 5896 622249493 622249353 1.400000e-16 99.0
36 TraesCS2A01G146800 chr5B 79.104 134 23 3 5768 5896 449134725 449134858 3.030000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G146800 chr2A 92335369 92341470 6101 True 11269.00 11269 100.000000 1 6102 1 chr2A.!!$R1 6101
1 TraesCS2A01G146800 chr2B 146634003 146640091 6088 True 1925.75 4540 88.349750 1 6100 4 chr2B.!!$R3 6099
2 TraesCS2A01G146800 chr2B 146614390 146615262 872 True 380.00 623 91.056000 4948 6100 3 chr2B.!!$R2 1152
3 TraesCS2A01G146800 chr2D 94337621 94342715 5094 True 2310.00 3770 91.072667 184 5355 3 chr2D.!!$R2 5171

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
356 359 0.034059 GGGATCCGCTCGACAATGAT 59.966 55.0 5.45 0.0 0.00 2.45 F
1127 1424 0.040499 ACTCAGTGAGTCCTCCCTCC 59.960 60.0 20.34 0.0 38.71 4.30 F
2083 2388 0.803117 GCGTTTACTGGAAGAAGGGC 59.197 55.0 0.00 0.0 37.43 5.19 F
3063 3380 0.764890 AGCCTTGCAGGTACTTCACA 59.235 50.0 0.00 0.0 37.80 3.58 F
3799 4129 0.178990 GGGAGCCAAAAGTCCACACT 60.179 55.0 0.00 0.0 34.14 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1691 1996 0.878416 GTGCATTGTCGGGTAAAGCA 59.122 50.000 0.00 0.0 0.00 3.91 R
2618 2924 1.304052 CCGGTGCCAGATTTCCCAA 60.304 57.895 0.00 0.0 0.00 4.12 R
3780 4110 0.178990 AGTGTGGACTTTTGGCTCCC 60.179 55.000 0.00 0.0 0.00 4.30 R
4456 4824 0.739462 CCTACGCGCAAGGAATCACA 60.739 55.000 20.52 0.0 36.08 3.58 R
5493 5873 0.034186 TGGCAGCGGATTTCTGGAAT 60.034 50.000 0.00 0.0 32.41 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 5.520376 AAAATATGCAATGTAGGTGCTCC 57.480 39.130 0.00 0.00 42.69 4.70
92 93 4.288626 TGTAGGTGCTCCTATGGTTTTTCT 59.711 41.667 17.19 0.00 46.48 2.52
117 119 1.034356 TCTCGGTCCGTCACTCAAAA 58.966 50.000 11.88 0.00 0.00 2.44
126 128 5.414765 GGTCCGTCACTCAAAATCCTTTAAT 59.585 40.000 0.00 0.00 0.00 1.40
127 129 6.072119 GGTCCGTCACTCAAAATCCTTTAATT 60.072 38.462 0.00 0.00 0.00 1.40
128 130 6.801862 GTCCGTCACTCAAAATCCTTTAATTG 59.198 38.462 0.00 0.00 0.00 2.32
130 132 6.801862 CCGTCACTCAAAATCCTTTAATTGTC 59.198 38.462 0.00 0.00 0.00 3.18
168 171 2.534990 CAATTTTGCCCCCTCCTTACA 58.465 47.619 0.00 0.00 0.00 2.41
172 175 0.918983 TTGCCCCCTCCTTACAGATG 59.081 55.000 0.00 0.00 0.00 2.90
178 181 1.072965 CCCTCCTTACAGATGGGCATC 59.927 57.143 0.00 0.00 38.09 3.91
244 247 6.658831 CAGAGTCGTCACATTAACAACATTT 58.341 36.000 0.00 0.00 0.00 2.32
313 316 4.504385 GCAACGCACAAACACAAAATTAG 58.496 39.130 0.00 0.00 0.00 1.73
356 359 0.034059 GGGATCCGCTCGACAATGAT 59.966 55.000 5.45 0.00 0.00 2.45
385 391 2.485659 TCCTCAATCTTCTGCCATCCT 58.514 47.619 0.00 0.00 0.00 3.24
395 401 0.176680 CTGCCATCCTACGTGAAGCT 59.823 55.000 0.00 0.00 0.00 3.74
414 420 1.002011 GGGGCCACCTGAAGTCTTC 60.002 63.158 4.39 5.58 36.80 2.87
427 433 4.295133 GAAGTCTTCTTCACGCTAAACG 57.705 45.455 5.27 0.00 46.50 3.60
476 482 4.696455 CCATGATACGCTGCCATATATGA 58.304 43.478 14.54 0.00 0.00 2.15
523 529 6.706270 AGGACGCTTCATAAATTATGACGATT 59.294 34.615 23.57 11.02 44.32 3.34
541 547 9.742144 ATGACGATTCTACTATACCAGAGTATT 57.258 33.333 0.00 0.00 39.88 1.89
542 548 9.217278 TGACGATTCTACTATACCAGAGTATTC 57.783 37.037 0.00 0.00 39.88 1.75
570 576 7.987649 TCGGCCAAAATCGTTTTATTAATAGT 58.012 30.769 2.24 0.00 0.00 2.12
571 577 9.107177 TCGGCCAAAATCGTTTTATTAATAGTA 57.893 29.630 2.24 0.00 0.00 1.82
596 602 1.480789 TATAGCGACCAGGCAGACAA 58.519 50.000 0.00 0.00 34.64 3.18
598 604 0.898326 TAGCGACCAGGCAGACAAGA 60.898 55.000 0.00 0.00 34.64 3.02
647 653 2.214376 TGCTTACAAATGGGACCCAG 57.786 50.000 20.37 8.10 36.75 4.45
649 655 1.474330 CTTACAAATGGGACCCAGCC 58.526 55.000 20.37 0.00 36.75 4.85
1124 1421 0.251832 TCCACTCAGTGAGTCCTCCC 60.252 60.000 23.08 0.00 41.37 4.30
1125 1422 0.252012 CCACTCAGTGAGTCCTCCCT 60.252 60.000 23.08 0.00 41.37 4.20
1126 1423 1.181786 CACTCAGTGAGTCCTCCCTC 58.818 60.000 23.08 0.00 41.37 4.30
1127 1424 0.040499 ACTCAGTGAGTCCTCCCTCC 59.960 60.000 20.34 0.00 38.71 4.30
1178 1477 1.652012 CTTTTGGCTTTGGACGCGA 59.348 52.632 15.93 0.00 0.00 5.87
1203 1503 1.493772 TCTGTAACTTGTTCGTGCGG 58.506 50.000 0.00 0.00 0.00 5.69
1386 1687 8.198109 GCCTAACTGAAGATGTTAGATGTAAGA 58.802 37.037 13.25 0.00 45.65 2.10
1402 1703 1.827399 AAGACAGTGGTACGCAGGGG 61.827 60.000 0.00 0.00 44.14 4.79
1408 1709 2.056223 TGGTACGCAGGGGTAGAGC 61.056 63.158 0.00 0.00 0.00 4.09
1413 1714 0.905337 ACGCAGGGGTAGAGCTTCTT 60.905 55.000 0.00 0.00 0.00 2.52
1443 1744 8.454570 TTTAGTTCGTAATTGAAAGGTTTCCT 57.545 30.769 0.05 0.00 36.36 3.36
1447 1748 5.617252 TCGTAATTGAAAGGTTTCCTCACT 58.383 37.500 0.05 0.00 36.36 3.41
1609 1914 3.502595 GCTCCTCACTCCTTTTAAACCAC 59.497 47.826 0.00 0.00 0.00 4.16
1659 1964 4.478206 TTGGGCATGTTGTTTCTTTTCA 57.522 36.364 0.00 0.00 0.00 2.69
1736 2041 4.082571 ACCATTTGCTTCAGATGTGCTTAC 60.083 41.667 0.00 0.00 0.00 2.34
1738 2043 5.336213 CCATTTGCTTCAGATGTGCTTACTT 60.336 40.000 0.00 0.00 0.00 2.24
1811 2116 6.127786 GGGATCTAATTCTGCAATCTTATGCC 60.128 42.308 0.00 0.00 45.83 4.40
1885 2190 8.131731 GCTTCTGAAACTGTTAATTTTGACTCT 58.868 33.333 0.00 0.00 0.00 3.24
1907 2212 4.135306 TGAATTACCGCACTACAAAACCA 58.865 39.130 0.00 0.00 0.00 3.67
2071 2376 2.050691 CAACAACATGGCAGCGTTTAC 58.949 47.619 0.00 0.00 0.00 2.01
2083 2388 0.803117 GCGTTTACTGGAAGAAGGGC 59.197 55.000 0.00 0.00 37.43 5.19
2127 2432 1.475930 GGATCCTGGTAAGAGCTTGGC 60.476 57.143 3.84 0.00 0.00 4.52
2368 2673 1.607628 GTGAGCTCATTCATGGCATCC 59.392 52.381 21.47 0.00 0.00 3.51
2422 2727 1.567649 ACTGATGGTGCTGGGATGAAT 59.432 47.619 0.00 0.00 0.00 2.57
2472 2777 5.067283 GGTCAAAAGCTGTTTTAGAGGTTCA 59.933 40.000 0.00 0.00 33.93 3.18
2522 2827 9.472361 CCAGATTTCTTGAATGGCTTAAATATG 57.528 33.333 0.00 0.00 0.00 1.78
2593 2899 2.297129 GCACTTCCTCCTCCAGGCT 61.297 63.158 0.00 0.00 43.08 4.58
2618 2924 3.326006 TGCTCCTGATCTTGAACAGAAGT 59.674 43.478 9.07 0.00 34.16 3.01
2706 3012 4.399303 AGTTCTTGTTTTACTGCTGCACTT 59.601 37.500 0.00 0.00 0.00 3.16
2723 3029 2.224079 CACTTGTGTGGTGCATCTGTAC 59.776 50.000 0.00 0.00 40.33 2.90
2735 3051 7.013274 GTGGTGCATCTGTACAAATATGGTTAT 59.987 37.037 0.00 0.00 32.02 1.89
2755 3071 9.073475 TGGTTATGTTCTTTTTATGCTACTTGT 57.927 29.630 0.00 0.00 0.00 3.16
2756 3072 9.556030 GGTTATGTTCTTTTTATGCTACTTGTC 57.444 33.333 0.00 0.00 0.00 3.18
2777 3093 5.008217 TGTCAATTAAGTGTACACCTGCAAC 59.992 40.000 22.28 12.22 0.00 4.17
2782 3098 1.070758 AGTGTACACCTGCAACTCTGG 59.929 52.381 22.28 0.00 39.46 3.86
2836 3152 4.945246 TGCTGTCGAAGGGAATCTATTAC 58.055 43.478 0.00 0.00 0.00 1.89
2842 3158 9.197694 CTGTCGAAGGGAATCTATTACTAATTG 57.802 37.037 0.00 0.00 0.00 2.32
2843 3159 8.701895 TGTCGAAGGGAATCTATTACTAATTGT 58.298 33.333 0.00 0.00 0.00 2.71
2858 3174 8.741603 TTACTAATTGTATTTTAGGCACCCTC 57.258 34.615 0.00 0.00 34.61 4.30
2859 3175 5.820947 ACTAATTGTATTTTAGGCACCCTCG 59.179 40.000 0.00 0.00 34.61 4.63
2876 3192 9.444600 GGCACCCTCGATTATAGAAATAATTTA 57.555 33.333 0.00 0.00 38.21 1.40
2910 3226 7.617041 AAGCTAGCTTAATGGTCTTAACAAG 57.383 36.000 28.36 0.00 34.05 3.16
2914 3230 4.459337 AGCTTAATGGTCTTAACAAGTGCC 59.541 41.667 0.00 0.00 0.00 5.01
3063 3380 0.764890 AGCCTTGCAGGTACTTCACA 59.235 50.000 0.00 0.00 37.80 3.58
3083 3400 6.715464 TCACAGTCGTTTCTTTGATTCTTTC 58.285 36.000 0.00 0.00 0.00 2.62
3086 3403 6.093495 ACAGTCGTTTCTTTGATTCTTTCACA 59.907 34.615 0.00 0.00 32.84 3.58
3107 3424 4.810491 ACAAATTGCTGGTGTTGTCATTTC 59.190 37.500 0.00 0.00 28.08 2.17
3126 3445 5.422666 TTTCCAATGCAGCTGTTATATCG 57.577 39.130 16.64 3.47 0.00 2.92
3216 3540 3.257873 TGGACCATTGCATTGTAGGTTTG 59.742 43.478 7.75 0.00 31.57 2.93
3288 3612 2.906389 AGTGAGTTGCAAGGATCCTGTA 59.094 45.455 17.02 6.46 0.00 2.74
3333 3657 9.282247 CTTTTTCAAGCTGCTGTTATACTTATG 57.718 33.333 1.35 0.00 0.00 1.90
3455 3779 6.210385 TGGTGATGCTATGTTACAAAAATGGT 59.790 34.615 0.00 0.00 0.00 3.55
3475 3799 0.906775 TCATTGACCCGGGAAGGTAC 59.093 55.000 32.02 11.24 41.42 3.34
3530 3854 5.589855 TGTATGGCATCAGGAAACTACAATG 59.410 40.000 1.65 0.00 40.21 2.82
3574 3898 8.236585 AGCCCAGCTTTTAAAAATTCAAAAAT 57.763 26.923 1.66 0.00 33.89 1.82
3634 3961 3.957671 ACATGTAAATGCAGATGCTCG 57.042 42.857 0.00 0.00 42.66 5.03
3659 3986 8.827599 CGCTATGTACGCACAAATAAAAATATC 58.172 33.333 0.00 0.00 38.42 1.63
3771 4101 3.303938 TGTTTGAAAATTCTGGGCTCCA 58.696 40.909 0.00 0.00 0.00 3.86
3773 4103 4.021192 TGTTTGAAAATTCTGGGCTCCATC 60.021 41.667 0.00 0.00 30.82 3.51
3776 4106 4.785301 TGAAAATTCTGGGCTCCATCTAG 58.215 43.478 0.00 0.00 30.82 2.43
3777 4107 2.947127 AATTCTGGGCTCCATCTAGC 57.053 50.000 0.00 0.00 41.99 3.42
3783 4113 4.302622 GCTCCATCTAGCCTGGGA 57.697 61.111 10.29 2.38 36.45 4.37
3785 4115 2.056985 CTCCATCTAGCCTGGGAGC 58.943 63.158 10.29 0.00 40.37 4.70
3786 4116 1.460305 TCCATCTAGCCTGGGAGCC 60.460 63.158 10.29 0.00 34.36 4.70
3787 4117 1.767672 CCATCTAGCCTGGGAGCCA 60.768 63.158 0.00 0.00 0.00 4.75
3788 4118 1.348008 CCATCTAGCCTGGGAGCCAA 61.348 60.000 0.00 0.00 30.80 4.52
3789 4119 0.548031 CATCTAGCCTGGGAGCCAAA 59.452 55.000 0.00 0.00 30.80 3.28
3790 4120 1.064463 CATCTAGCCTGGGAGCCAAAA 60.064 52.381 0.00 0.00 30.80 2.44
3791 4121 0.620556 TCTAGCCTGGGAGCCAAAAG 59.379 55.000 0.00 0.00 30.80 2.27
3792 4122 0.329596 CTAGCCTGGGAGCCAAAAGT 59.670 55.000 0.00 0.00 30.80 2.66
3793 4123 0.328258 TAGCCTGGGAGCCAAAAGTC 59.672 55.000 0.00 0.00 30.80 3.01
3794 4124 1.979155 GCCTGGGAGCCAAAAGTCC 60.979 63.158 0.00 0.00 30.80 3.85
3795 4125 1.460255 CCTGGGAGCCAAAAGTCCA 59.540 57.895 0.00 0.00 34.14 4.02
3796 4126 0.895559 CCTGGGAGCCAAAAGTCCAC 60.896 60.000 0.00 0.00 34.14 4.02
3797 4127 0.178992 CTGGGAGCCAAAAGTCCACA 60.179 55.000 0.00 0.00 34.14 4.17
3798 4128 0.467290 TGGGAGCCAAAAGTCCACAC 60.467 55.000 0.00 0.00 34.14 3.82
3799 4129 0.178990 GGGAGCCAAAAGTCCACACT 60.179 55.000 0.00 0.00 34.14 3.55
3800 4130 1.692411 GGAGCCAAAAGTCCACACTT 58.308 50.000 0.00 0.00 45.43 3.16
3835 4165 5.881447 ACTATTACTTCGCTGACACTACTG 58.119 41.667 0.00 0.00 0.00 2.74
3901 4231 6.231951 TCGTGGGATGTTTTCAACAACTATA 58.768 36.000 0.00 0.00 45.86 1.31
3905 4235 8.621286 GTGGGATGTTTTCAACAACTATATAGG 58.379 37.037 14.25 0.00 45.86 2.57
3953 4283 3.620488 TCTTGCAGAAGTTGTCTTGGTT 58.380 40.909 0.00 0.00 32.70 3.67
3954 4284 3.378112 TCTTGCAGAAGTTGTCTTGGTTG 59.622 43.478 0.00 0.00 32.70 3.77
3978 4322 9.995003 TTGTTTCTGTTCCAATATTTTTAGCAT 57.005 25.926 0.00 0.00 0.00 3.79
3979 4323 9.421806 TGTTTCTGTTCCAATATTTTTAGCATG 57.578 29.630 0.00 0.00 0.00 4.06
4076 4431 5.636123 TGGGTTAAAAACTTCCTCATGCTA 58.364 37.500 0.00 0.00 0.00 3.49
4085 4440 4.910195 ACTTCCTCATGCTAATTGTCACA 58.090 39.130 0.00 0.00 0.00 3.58
4139 4494 6.937436 TTCTGACATCATGAAATCCATCTG 57.063 37.500 0.00 0.00 31.94 2.90
4146 4501 9.674824 GACATCATGAAATCCATCTGTATTTTC 57.325 33.333 0.00 0.00 31.76 2.29
4220 4575 5.011533 CCTCCTCTTCCAGGTAATCATGTAG 59.988 48.000 0.00 0.00 43.95 2.74
4223 4578 6.778069 TCCTCTTCCAGGTAATCATGTAGTAG 59.222 42.308 0.00 0.00 43.95 2.57
4228 4583 8.598202 TTCCAGGTAATCATGTAGTAGTGTTA 57.402 34.615 0.00 0.00 0.00 2.41
4230 4585 8.857098 TCCAGGTAATCATGTAGTAGTGTTATC 58.143 37.037 0.00 0.00 0.00 1.75
4259 4614 9.918630 AATTTCATCCATTTCTCTTGTAAGTTG 57.081 29.630 0.00 0.00 0.00 3.16
4284 4646 7.819900 TGTAACCTTACACAAATTTGCTTGTTT 59.180 29.630 18.12 9.23 38.64 2.83
4315 4677 3.340034 GGTTTCCACCGATACATTGTCA 58.660 45.455 0.00 0.00 31.60 3.58
4323 4685 6.432783 TCCACCGATACATTGTCAAGAATTTT 59.567 34.615 0.00 0.00 0.00 1.82
4349 4711 2.200067 CGCCTCATCTGACAATCTGAC 58.800 52.381 0.00 0.00 0.00 3.51
4379 4741 1.062587 GGTGCAAGAATTCGATCCACG 59.937 52.381 0.00 0.00 44.09 4.94
4397 4759 4.588951 TCCACGATCTGAGGTATGCTTAAT 59.411 41.667 0.00 0.00 0.00 1.40
4447 4815 3.923017 ACTAGTGGCAAACAAATGAGC 57.077 42.857 0.00 0.00 0.00 4.26
4456 4824 3.784338 CAAACAAATGAGCCACACACTT 58.216 40.909 0.00 0.00 0.00 3.16
4471 4839 0.453282 CACTTGTGATTCCTTGCGCG 60.453 55.000 0.00 0.00 0.00 6.86
4511 4879 1.718757 GGGCCAGATGTTGTCGATGC 61.719 60.000 4.39 0.00 0.00 3.91
4656 5024 1.825474 AGTTGAGAGACCCGGTATGTG 59.175 52.381 0.00 0.00 0.00 3.21
4666 5034 1.831736 CCCGGTATGTGGAAACTCTCT 59.168 52.381 0.00 0.00 0.00 3.10
4667 5035 2.418746 CCCGGTATGTGGAAACTCTCTG 60.419 54.545 0.00 0.00 0.00 3.35
4674 5042 4.214986 TGTGGAAACTCTCTGTTGTTCA 57.785 40.909 0.00 0.00 39.13 3.18
4687 5055 7.866729 TCTCTGTTGTTCATGCGTAAAATTTA 58.133 30.769 0.00 0.00 0.00 1.40
4701 5071 7.583401 TGCGTAAAATTTACACAAACTCGTAAG 59.417 33.333 15.19 0.00 0.00 2.34
4719 5089 3.350219 AAGTCTATCCACCAACGCAAT 57.650 42.857 0.00 0.00 0.00 3.56
4724 5094 5.354234 AGTCTATCCACCAACGCAATAAAAG 59.646 40.000 0.00 0.00 0.00 2.27
4725 5095 5.353123 GTCTATCCACCAACGCAATAAAAGA 59.647 40.000 0.00 0.00 0.00 2.52
4743 5113 2.760374 AGAAAAGCGACAGAACAGAGG 58.240 47.619 0.00 0.00 0.00 3.69
4770 5140 3.402110 TGATAGTGCTTGTGGAACTGTG 58.598 45.455 0.00 0.00 34.06 3.66
4771 5141 2.254546 TAGTGCTTGTGGAACTGTGG 57.745 50.000 0.00 0.00 34.06 4.17
4851 5221 2.529632 GAAGGAGGCTTTGTTCCCATT 58.470 47.619 0.00 0.00 33.83 3.16
4954 5324 1.067495 AGCTCCTGAAGAAGTACACGC 60.067 52.381 0.00 0.00 0.00 5.34
5018 5388 0.460284 AAGATTGGGCGTGCGTAGAG 60.460 55.000 0.00 0.00 0.00 2.43
5023 5393 1.900245 TGGGCGTGCGTAGAGATATA 58.100 50.000 0.00 0.00 0.00 0.86
5024 5394 1.538512 TGGGCGTGCGTAGAGATATAC 59.461 52.381 0.00 0.00 0.00 1.47
5077 5449 8.734386 CATTTGAGCATAGGGATTATAGGAAAC 58.266 37.037 0.00 0.00 0.00 2.78
5150 5523 2.325082 GCCGTGAAGAATGTGCCGT 61.325 57.895 0.00 0.00 0.00 5.68
5217 5591 6.162079 ACTGTCACATGTTTCTACAGATGAG 58.838 40.000 23.79 9.47 39.93 2.90
5220 5594 6.646653 TGTCACATGTTTCTACAGATGAGTTC 59.353 38.462 0.00 0.00 37.77 3.01
5255 5630 7.083858 TCTTTGAAGTGCACAAAATATGCTAC 58.916 34.615 21.04 0.00 43.77 3.58
5275 5650 1.447317 AACTCGCCTTGCAACACCAG 61.447 55.000 0.00 0.00 0.00 4.00
5276 5651 3.259425 CTCGCCTTGCAACACCAGC 62.259 63.158 0.00 0.00 0.00 4.85
5308 5688 1.479323 GTAGTGACGTTAGCCATGGGA 59.521 52.381 15.13 0.00 0.00 4.37
5398 5778 4.274459 GCCATTTGACACTGATAGATGACC 59.726 45.833 0.00 0.00 0.00 4.02
5399 5779 5.430886 CCATTTGACACTGATAGATGACCA 58.569 41.667 0.00 0.00 0.00 4.02
5400 5780 5.882000 CCATTTGACACTGATAGATGACCAA 59.118 40.000 0.00 0.00 0.00 3.67
5401 5781 6.037940 CCATTTGACACTGATAGATGACCAAG 59.962 42.308 0.00 0.00 0.00 3.61
5402 5782 4.743057 TGACACTGATAGATGACCAAGG 57.257 45.455 0.00 0.00 0.00 3.61
5403 5783 3.118629 TGACACTGATAGATGACCAAGGC 60.119 47.826 0.00 0.00 0.00 4.35
5404 5784 2.159043 ACACTGATAGATGACCAAGGCG 60.159 50.000 0.00 0.00 0.00 5.52
5405 5785 1.414181 ACTGATAGATGACCAAGGCGG 59.586 52.381 0.00 0.00 42.50 6.13
5406 5786 0.106708 TGATAGATGACCAAGGCGGC 59.893 55.000 0.00 0.00 39.03 6.53
5407 5787 0.106708 GATAGATGACCAAGGCGGCA 59.893 55.000 13.08 0.00 39.03 5.69
5408 5788 0.546122 ATAGATGACCAAGGCGGCAA 59.454 50.000 13.08 0.00 39.03 4.52
5409 5789 0.107703 TAGATGACCAAGGCGGCAAG 60.108 55.000 13.08 2.18 39.03 4.01
5410 5790 2.361610 ATGACCAAGGCGGCAAGG 60.362 61.111 13.08 15.10 39.03 3.61
5421 5801 2.524148 GGCAAGGCCCTGTTTGGT 60.524 61.111 0.00 0.00 44.06 3.67
5422 5802 2.140138 GGCAAGGCCCTGTTTGGTT 61.140 57.895 0.00 0.00 44.06 3.67
5423 5803 1.367471 GCAAGGCCCTGTTTGGTTC 59.633 57.895 0.00 0.00 0.00 3.62
5424 5804 1.398958 GCAAGGCCCTGTTTGGTTCA 61.399 55.000 0.00 0.00 0.00 3.18
5425 5805 0.675633 CAAGGCCCTGTTTGGTTCAG 59.324 55.000 0.00 0.00 0.00 3.02
5426 5806 1.115326 AAGGCCCTGTTTGGTTCAGC 61.115 55.000 0.00 0.00 0.00 4.26
5427 5807 1.531602 GGCCCTGTTTGGTTCAGCT 60.532 57.895 0.00 0.00 0.00 4.24
5428 5808 1.115326 GGCCCTGTTTGGTTCAGCTT 61.115 55.000 0.00 0.00 0.00 3.74
5429 5809 0.752658 GCCCTGTTTGGTTCAGCTTT 59.247 50.000 0.00 0.00 0.00 3.51
5430 5810 1.138859 GCCCTGTTTGGTTCAGCTTTT 59.861 47.619 0.00 0.00 0.00 2.27
5431 5811 2.364002 GCCCTGTTTGGTTCAGCTTTTA 59.636 45.455 0.00 0.00 0.00 1.52
5432 5812 3.006859 GCCCTGTTTGGTTCAGCTTTTAT 59.993 43.478 0.00 0.00 0.00 1.40
5433 5813 4.809673 CCCTGTTTGGTTCAGCTTTTATC 58.190 43.478 0.00 0.00 0.00 1.75
5434 5814 4.475944 CCTGTTTGGTTCAGCTTTTATCG 58.524 43.478 0.00 0.00 0.00 2.92
5435 5815 4.215399 CCTGTTTGGTTCAGCTTTTATCGA 59.785 41.667 0.00 0.00 0.00 3.59
5436 5816 5.103290 TGTTTGGTTCAGCTTTTATCGAC 57.897 39.130 0.00 0.00 0.00 4.20
5437 5817 4.148891 GTTTGGTTCAGCTTTTATCGACG 58.851 43.478 0.00 0.00 0.00 5.12
5438 5818 2.343101 TGGTTCAGCTTTTATCGACGG 58.657 47.619 0.00 0.00 0.00 4.79
5439 5819 2.028839 TGGTTCAGCTTTTATCGACGGA 60.029 45.455 0.00 0.00 0.00 4.69
5440 5820 3.195661 GGTTCAGCTTTTATCGACGGAT 58.804 45.455 0.00 0.00 36.65 4.18
5441 5821 3.621715 GGTTCAGCTTTTATCGACGGATT 59.378 43.478 0.00 0.00 34.00 3.01
5442 5822 4.260253 GGTTCAGCTTTTATCGACGGATTC 60.260 45.833 0.00 0.00 34.00 2.52
5443 5823 3.454375 TCAGCTTTTATCGACGGATTCC 58.546 45.455 0.00 0.00 34.00 3.01
5469 5849 2.845019 CGCAGCAGAATCTGAACCA 58.155 52.632 15.38 0.00 36.19 3.67
5470 5850 1.159285 CGCAGCAGAATCTGAACCAA 58.841 50.000 15.38 0.00 36.19 3.67
5471 5851 1.536766 CGCAGCAGAATCTGAACCAAA 59.463 47.619 15.38 0.00 36.19 3.28
5472 5852 2.413765 CGCAGCAGAATCTGAACCAAAG 60.414 50.000 15.38 0.00 36.19 2.77
5473 5853 2.094854 GCAGCAGAATCTGAACCAAAGG 60.095 50.000 15.38 0.00 36.19 3.11
5474 5854 2.490903 CAGCAGAATCTGAACCAAAGGG 59.509 50.000 15.38 0.00 36.19 3.95
5475 5855 1.203287 GCAGAATCTGAACCAAAGGGC 59.797 52.381 15.38 0.00 33.00 5.19
5476 5856 2.517959 CAGAATCTGAACCAAAGGGCA 58.482 47.619 3.77 0.00 33.00 5.36
5477 5857 2.892852 CAGAATCTGAACCAAAGGGCAA 59.107 45.455 3.77 0.00 33.00 4.52
5478 5858 3.321682 CAGAATCTGAACCAAAGGGCAAA 59.678 43.478 3.77 0.00 33.00 3.68
5479 5859 4.020839 CAGAATCTGAACCAAAGGGCAAAT 60.021 41.667 3.77 0.00 33.00 2.32
5480 5860 4.221482 AGAATCTGAACCAAAGGGCAAATC 59.779 41.667 0.00 0.00 37.90 2.17
5481 5861 3.243359 TCTGAACCAAAGGGCAAATCT 57.757 42.857 0.00 0.00 37.90 2.40
5482 5862 4.380843 TCTGAACCAAAGGGCAAATCTA 57.619 40.909 0.00 0.00 37.90 1.98
5483 5863 4.335416 TCTGAACCAAAGGGCAAATCTAG 58.665 43.478 0.00 0.00 37.90 2.43
5484 5864 2.825532 TGAACCAAAGGGCAAATCTAGC 59.174 45.455 0.00 0.00 37.90 3.42
5485 5865 2.603075 ACCAAAGGGCAAATCTAGCA 57.397 45.000 0.00 0.00 37.90 3.49
5486 5866 2.450476 ACCAAAGGGCAAATCTAGCAG 58.550 47.619 0.00 0.00 37.90 4.24
5487 5867 2.041620 ACCAAAGGGCAAATCTAGCAGA 59.958 45.455 0.00 0.00 37.90 4.26
5488 5868 3.091545 CCAAAGGGCAAATCTAGCAGAA 58.908 45.455 0.00 0.00 0.00 3.02
5489 5869 3.703052 CCAAAGGGCAAATCTAGCAGAAT 59.297 43.478 0.00 0.00 0.00 2.40
5490 5870 4.161001 CCAAAGGGCAAATCTAGCAGAATT 59.839 41.667 0.00 0.00 0.00 2.17
5491 5871 5.346522 CAAAGGGCAAATCTAGCAGAATTC 58.653 41.667 0.00 0.00 0.00 2.17
5492 5872 3.209410 AGGGCAAATCTAGCAGAATTCG 58.791 45.455 0.00 0.00 0.00 3.34
5493 5873 3.118261 AGGGCAAATCTAGCAGAATTCGA 60.118 43.478 0.00 0.00 0.00 3.71
5494 5874 3.817647 GGGCAAATCTAGCAGAATTCGAT 59.182 43.478 0.00 0.00 0.00 3.59
5495 5875 4.276926 GGGCAAATCTAGCAGAATTCGATT 59.723 41.667 0.00 0.03 0.00 3.34
5496 5876 5.447573 GGCAAATCTAGCAGAATTCGATTC 58.552 41.667 0.00 0.00 39.56 2.52
5497 5877 5.447573 GCAAATCTAGCAGAATTCGATTCC 58.552 41.667 0.00 0.00 40.13 3.01
5498 5878 5.008019 GCAAATCTAGCAGAATTCGATTCCA 59.992 40.000 0.00 0.00 40.13 3.53
5499 5879 6.656945 CAAATCTAGCAGAATTCGATTCCAG 58.343 40.000 0.00 0.00 40.13 3.86
5500 5880 5.798125 ATCTAGCAGAATTCGATTCCAGA 57.202 39.130 0.00 0.51 40.13 3.86
5501 5881 5.598416 TCTAGCAGAATTCGATTCCAGAA 57.402 39.130 0.00 0.00 40.13 3.02
5502 5882 5.977635 TCTAGCAGAATTCGATTCCAGAAA 58.022 37.500 0.00 0.00 40.13 2.52
5503 5883 6.586344 TCTAGCAGAATTCGATTCCAGAAAT 58.414 36.000 0.00 0.00 40.13 2.17
5504 5884 5.747951 AGCAGAATTCGATTCCAGAAATC 57.252 39.130 0.00 0.00 40.13 2.17
5505 5885 4.578105 AGCAGAATTCGATTCCAGAAATCC 59.422 41.667 0.00 0.00 40.69 3.01
5506 5886 4.553547 GCAGAATTCGATTCCAGAAATCCG 60.554 45.833 0.00 0.00 40.69 4.18
5507 5887 3.561725 AGAATTCGATTCCAGAAATCCGC 59.438 43.478 0.00 0.00 40.69 5.54
5508 5888 2.691409 TTCGATTCCAGAAATCCGCT 57.309 45.000 0.00 0.00 40.69 5.52
5509 5889 1.939974 TCGATTCCAGAAATCCGCTG 58.060 50.000 0.00 0.00 40.69 5.18
5510 5890 0.305922 CGATTCCAGAAATCCGCTGC 59.694 55.000 0.00 0.00 40.69 5.25
5511 5891 0.665298 GATTCCAGAAATCCGCTGCC 59.335 55.000 0.00 0.00 38.27 4.85
5512 5892 0.034186 ATTCCAGAAATCCGCTGCCA 60.034 50.000 0.00 0.00 32.06 4.92
5513 5893 0.251121 TTCCAGAAATCCGCTGCCAA 60.251 50.000 0.00 0.00 32.06 4.52
5514 5894 0.251121 TCCAGAAATCCGCTGCCAAA 60.251 50.000 0.00 0.00 32.06 3.28
5515 5895 0.602562 CCAGAAATCCGCTGCCAAAA 59.397 50.000 0.00 0.00 32.06 2.44
5516 5896 1.205417 CCAGAAATCCGCTGCCAAAAT 59.795 47.619 0.00 0.00 32.06 1.82
5517 5897 2.533266 CAGAAATCCGCTGCCAAAATC 58.467 47.619 0.00 0.00 0.00 2.17
5518 5898 2.165030 CAGAAATCCGCTGCCAAAATCT 59.835 45.455 0.00 0.00 0.00 2.40
5519 5899 2.165030 AGAAATCCGCTGCCAAAATCTG 59.835 45.455 0.00 0.00 0.00 2.90
5520 5900 1.838112 AATCCGCTGCCAAAATCTGA 58.162 45.000 0.00 0.00 0.00 3.27
5521 5901 1.838112 ATCCGCTGCCAAAATCTGAA 58.162 45.000 0.00 0.00 0.00 3.02
5522 5902 0.881118 TCCGCTGCCAAAATCTGAAC 59.119 50.000 0.00 0.00 0.00 3.18
5523 5903 0.109132 CCGCTGCCAAAATCTGAACC 60.109 55.000 0.00 0.00 0.00 3.62
5524 5904 0.597568 CGCTGCCAAAATCTGAACCA 59.402 50.000 0.00 0.00 0.00 3.67
5525 5905 1.000385 CGCTGCCAAAATCTGAACCAA 60.000 47.619 0.00 0.00 0.00 3.67
5526 5906 2.545532 CGCTGCCAAAATCTGAACCAAA 60.546 45.455 0.00 0.00 0.00 3.28
5527 5907 3.465871 GCTGCCAAAATCTGAACCAAAA 58.534 40.909 0.00 0.00 0.00 2.44
5528 5908 3.495753 GCTGCCAAAATCTGAACCAAAAG 59.504 43.478 0.00 0.00 0.00 2.27
5529 5909 3.465871 TGCCAAAATCTGAACCAAAAGC 58.534 40.909 0.00 0.00 0.00 3.51
5530 5910 2.476241 GCCAAAATCTGAACCAAAAGCG 59.524 45.455 0.00 0.00 0.00 4.68
5531 5911 3.059166 CCAAAATCTGAACCAAAAGCGG 58.941 45.455 0.00 0.00 0.00 5.52
5532 5912 3.243704 CCAAAATCTGAACCAAAAGCGGA 60.244 43.478 0.00 0.00 0.00 5.54
5533 5913 4.367450 CAAAATCTGAACCAAAAGCGGAA 58.633 39.130 0.00 0.00 0.00 4.30
5534 5914 3.923017 AATCTGAACCAAAAGCGGAAG 57.077 42.857 0.00 0.00 0.00 3.46
5547 5927 4.021925 GGAAGCAGCCCAGGACGT 62.022 66.667 0.00 0.00 0.00 4.34
5548 5928 2.743928 GAAGCAGCCCAGGACGTG 60.744 66.667 0.00 0.00 0.00 4.49
5552 5932 2.281761 CAGCCCAGGACGTGCTTT 60.282 61.111 6.93 0.00 31.77 3.51
5553 5933 2.032681 AGCCCAGGACGTGCTTTC 59.967 61.111 6.93 0.00 29.17 2.62
5554 5934 3.056328 GCCCAGGACGTGCTTTCC 61.056 66.667 6.93 0.00 0.00 3.13
5555 5935 2.429930 CCCAGGACGTGCTTTCCA 59.570 61.111 6.93 0.00 35.33 3.53
5556 5936 1.228124 CCCAGGACGTGCTTTCCAA 60.228 57.895 6.93 0.00 35.33 3.53
5557 5937 0.821711 CCCAGGACGTGCTTTCCAAA 60.822 55.000 6.93 0.00 35.33 3.28
5558 5938 1.028905 CCAGGACGTGCTTTCCAAAA 58.971 50.000 6.93 0.00 35.33 2.44
5559 5939 1.613437 CCAGGACGTGCTTTCCAAAAT 59.387 47.619 6.93 0.00 35.33 1.82
5560 5940 2.351738 CCAGGACGTGCTTTCCAAAATC 60.352 50.000 6.93 0.00 35.33 2.17
5561 5941 2.554032 CAGGACGTGCTTTCCAAAATCT 59.446 45.455 6.93 0.00 35.33 2.40
5562 5942 2.554032 AGGACGTGCTTTCCAAAATCTG 59.446 45.455 2.68 0.00 35.33 2.90
5563 5943 2.552315 GGACGTGCTTTCCAAAATCTGA 59.448 45.455 0.00 0.00 32.82 3.27
5564 5944 3.191371 GGACGTGCTTTCCAAAATCTGAT 59.809 43.478 0.00 0.00 32.82 2.90
5565 5945 4.321230 GGACGTGCTTTCCAAAATCTGATT 60.321 41.667 0.00 0.00 32.82 2.57
5566 5946 4.798574 ACGTGCTTTCCAAAATCTGATTC 58.201 39.130 2.92 0.00 0.00 2.52
5567 5947 4.168760 CGTGCTTTCCAAAATCTGATTCC 58.831 43.478 2.92 0.00 0.00 3.01
5568 5948 4.168760 GTGCTTTCCAAAATCTGATTCCG 58.831 43.478 2.92 0.00 0.00 4.30
5569 5949 3.182182 GCTTTCCAAAATCTGATTCCGC 58.818 45.455 2.92 0.00 0.00 5.54
5570 5950 3.119352 GCTTTCCAAAATCTGATTCCGCT 60.119 43.478 2.92 0.00 0.00 5.52
5571 5951 4.418392 CTTTCCAAAATCTGATTCCGCTG 58.582 43.478 2.92 0.03 0.00 5.18
5572 5952 1.745087 TCCAAAATCTGATTCCGCTGC 59.255 47.619 2.92 0.00 0.00 5.25
5573 5953 1.532505 CCAAAATCTGATTCCGCTGCG 60.533 52.381 16.34 16.34 0.00 5.18
5583 5963 2.961768 CCGCTGCGGGTCAAAATT 59.038 55.556 32.37 0.00 44.15 1.82
5584 5964 1.288752 CCGCTGCGGGTCAAAATTT 59.711 52.632 32.37 0.00 44.15 1.82
5585 5965 1.008361 CCGCTGCGGGTCAAAATTTG 61.008 55.000 32.37 0.00 44.15 2.32
5586 5966 0.039617 CGCTGCGGGTCAAAATTTGA 60.040 50.000 15.40 4.03 37.33 2.69
5587 5967 1.601663 CGCTGCGGGTCAAAATTTGAA 60.602 47.619 15.40 0.00 42.15 2.69
5588 5968 2.478831 GCTGCGGGTCAAAATTTGAAA 58.521 42.857 10.27 0.00 42.15 2.69
5589 5969 2.869192 GCTGCGGGTCAAAATTTGAAAA 59.131 40.909 10.27 0.00 42.15 2.29
5590 5970 3.311048 GCTGCGGGTCAAAATTTGAAAAA 59.689 39.130 10.27 0.00 42.15 1.94
5591 5971 4.552572 GCTGCGGGTCAAAATTTGAAAAAG 60.553 41.667 10.27 5.60 42.15 2.27
5592 5972 3.311048 TGCGGGTCAAAATTTGAAAAAGC 59.689 39.130 10.27 13.21 42.15 3.51
5593 5973 3.559655 GCGGGTCAAAATTTGAAAAAGCT 59.440 39.130 10.27 0.00 42.15 3.74
5594 5974 4.747605 GCGGGTCAAAATTTGAAAAAGCTA 59.252 37.500 10.27 0.00 42.15 3.32
5595 5975 5.408299 GCGGGTCAAAATTTGAAAAAGCTAT 59.592 36.000 10.27 0.00 42.15 2.97
5596 5976 6.588373 GCGGGTCAAAATTTGAAAAAGCTATA 59.412 34.615 10.27 0.00 42.15 1.31
5597 5977 7.277760 GCGGGTCAAAATTTGAAAAAGCTATAT 59.722 33.333 10.27 0.00 42.15 0.86
5598 5978 8.807581 CGGGTCAAAATTTGAAAAAGCTATATC 58.192 33.333 10.27 0.00 42.15 1.63
5599 5979 9.651913 GGGTCAAAATTTGAAAAAGCTATATCA 57.348 29.630 10.27 0.00 42.15 2.15
5608 5988 9.474920 TTTGAAAAAGCTATATCAACTGGTTTG 57.525 29.630 7.31 0.00 36.42 2.93
5609 5989 7.090173 TGAAAAAGCTATATCAACTGGTTTGC 58.910 34.615 0.00 0.00 34.88 3.68
5610 5990 5.582689 AAAGCTATATCAACTGGTTTGCC 57.417 39.130 0.00 0.00 34.88 4.52
5611 5991 4.235079 AGCTATATCAACTGGTTTGCCA 57.765 40.909 0.00 0.00 43.73 4.92
5612 5992 4.599041 AGCTATATCAACTGGTTTGCCAA 58.401 39.130 0.00 0.00 45.51 4.52
5613 5993 5.016173 AGCTATATCAACTGGTTTGCCAAA 58.984 37.500 0.00 0.00 45.51 3.28
5614 5994 5.658190 AGCTATATCAACTGGTTTGCCAAAT 59.342 36.000 0.00 0.00 45.51 2.32
5615 5995 5.750067 GCTATATCAACTGGTTTGCCAAATG 59.250 40.000 0.00 0.00 45.51 2.32
5616 5996 5.999205 ATATCAACTGGTTTGCCAAATGA 57.001 34.783 0.00 0.00 45.51 2.57
5617 5997 3.451141 TCAACTGGTTTGCCAAATGAC 57.549 42.857 0.00 0.00 45.51 3.06
5618 5998 2.102252 TCAACTGGTTTGCCAAATGACC 59.898 45.455 0.00 0.00 45.51 4.02
5619 5999 2.086610 ACTGGTTTGCCAAATGACCT 57.913 45.000 0.00 0.00 45.51 3.85
5620 6000 3.237268 ACTGGTTTGCCAAATGACCTA 57.763 42.857 0.00 0.00 45.51 3.08
5621 6001 2.890945 ACTGGTTTGCCAAATGACCTAC 59.109 45.455 0.00 0.00 45.51 3.18
5622 6002 2.890311 CTGGTTTGCCAAATGACCTACA 59.110 45.455 0.00 0.00 45.51 2.74
5623 6003 3.505386 TGGTTTGCCAAATGACCTACAT 58.495 40.909 0.00 0.00 42.83 2.29
5649 6029 4.771590 TTCACATGAGATTTTCCACAGC 57.228 40.909 0.00 0.00 0.00 4.40
5650 6030 4.025040 TCACATGAGATTTTCCACAGCT 57.975 40.909 0.00 0.00 0.00 4.24
5651 6031 3.754850 TCACATGAGATTTTCCACAGCTG 59.245 43.478 13.48 13.48 0.00 4.24
5652 6032 3.504906 CACATGAGATTTTCCACAGCTGT 59.495 43.478 15.25 15.25 0.00 4.40
5653 6033 4.022589 CACATGAGATTTTCCACAGCTGTT 60.023 41.667 18.94 0.15 0.00 3.16
5654 6034 4.586001 ACATGAGATTTTCCACAGCTGTTT 59.414 37.500 18.94 0.00 0.00 2.83
5655 6035 5.069516 ACATGAGATTTTCCACAGCTGTTTT 59.930 36.000 18.94 0.00 0.00 2.43
5656 6036 5.596836 TGAGATTTTCCACAGCTGTTTTT 57.403 34.783 18.94 0.00 0.00 1.94
5676 6056 6.890663 TTTTTCACAGCAGATTTTTCACAG 57.109 33.333 0.00 0.00 0.00 3.66
5677 6057 3.631145 TCACAGCAGATTTTTCACAGC 57.369 42.857 0.00 0.00 0.00 4.40
5678 6058 3.216800 TCACAGCAGATTTTTCACAGCT 58.783 40.909 0.00 0.00 0.00 4.24
5679 6059 4.388485 TCACAGCAGATTTTTCACAGCTA 58.612 39.130 0.00 0.00 0.00 3.32
5680 6060 5.005740 TCACAGCAGATTTTTCACAGCTAT 58.994 37.500 0.00 0.00 0.00 2.97
5681 6061 5.474532 TCACAGCAGATTTTTCACAGCTATT 59.525 36.000 0.00 0.00 0.00 1.73
5682 6062 6.016024 TCACAGCAGATTTTTCACAGCTATTT 60.016 34.615 0.00 0.00 0.00 1.40
5683 6063 6.643770 CACAGCAGATTTTTCACAGCTATTTT 59.356 34.615 0.00 0.00 0.00 1.82
5684 6064 7.170320 CACAGCAGATTTTTCACAGCTATTTTT 59.830 33.333 0.00 0.00 0.00 1.94
5685 6065 8.359642 ACAGCAGATTTTTCACAGCTATTTTTA 58.640 29.630 0.00 0.00 0.00 1.52
5686 6066 8.857216 CAGCAGATTTTTCACAGCTATTTTTAG 58.143 33.333 0.00 0.00 0.00 1.85
5687 6067 8.796475 AGCAGATTTTTCACAGCTATTTTTAGA 58.204 29.630 0.00 0.00 0.00 2.10
5688 6068 9.410556 GCAGATTTTTCACAGCTATTTTTAGAA 57.589 29.630 0.00 0.00 0.00 2.10
5694 6074 9.691362 TTTTCACAGCTATTTTTAGAAATCCAC 57.309 29.630 0.00 0.00 36.82 4.02
5695 6075 7.994425 TCACAGCTATTTTTAGAAATCCACA 57.006 32.000 0.00 0.00 36.82 4.17
5696 6076 8.044060 TCACAGCTATTTTTAGAAATCCACAG 57.956 34.615 0.00 0.00 36.82 3.66
5697 6077 6.749118 CACAGCTATTTTTAGAAATCCACAGC 59.251 38.462 0.00 0.00 36.82 4.40
5698 6078 6.127619 ACAGCTATTTTTAGAAATCCACAGCC 60.128 38.462 7.31 0.00 36.82 4.85
5699 6079 5.066505 AGCTATTTTTAGAAATCCACAGCCG 59.933 40.000 7.31 0.00 36.82 5.52
5700 6080 5.065988 GCTATTTTTAGAAATCCACAGCCGA 59.934 40.000 0.00 0.00 36.82 5.54
5701 6081 5.975693 ATTTTTAGAAATCCACAGCCGAA 57.024 34.783 0.00 0.00 29.53 4.30
5702 6082 4.759516 TTTTAGAAATCCACAGCCGAAC 57.240 40.909 0.00 0.00 0.00 3.95
5703 6083 2.396590 TAGAAATCCACAGCCGAACC 57.603 50.000 0.00 0.00 0.00 3.62
5704 6084 0.400213 AGAAATCCACAGCCGAACCA 59.600 50.000 0.00 0.00 0.00 3.67
5705 6085 1.202879 AGAAATCCACAGCCGAACCAA 60.203 47.619 0.00 0.00 0.00 3.67
5706 6086 1.611491 GAAATCCACAGCCGAACCAAA 59.389 47.619 0.00 0.00 0.00 3.28
5707 6087 0.958822 AATCCACAGCCGAACCAAAC 59.041 50.000 0.00 0.00 0.00 2.93
5708 6088 0.179004 ATCCACAGCCGAACCAAACA 60.179 50.000 0.00 0.00 0.00 2.83
5709 6089 0.817634 TCCACAGCCGAACCAAACAG 60.818 55.000 0.00 0.00 0.00 3.16
5710 6090 1.654220 CACAGCCGAACCAAACAGG 59.346 57.895 0.00 0.00 45.67 4.00
5711 6091 1.528309 ACAGCCGAACCAAACAGGG 60.528 57.895 0.00 0.00 43.89 4.45
5712 6092 2.597510 AGCCGAACCAAACAGGGC 60.598 61.111 0.00 0.00 43.89 5.19
5713 6093 3.680786 GCCGAACCAAACAGGGCC 61.681 66.667 0.00 0.00 43.89 5.80
5714 6094 2.115266 CCGAACCAAACAGGGCCT 59.885 61.111 0.00 0.00 43.89 5.19
5715 6095 1.377229 CCGAACCAAACAGGGCCTA 59.623 57.895 5.28 0.00 43.89 3.93
5742 6123 1.002087 GCCCCTGATACCTATCCGTTG 59.998 57.143 0.00 0.00 31.71 4.10
5839 6220 5.336150 TCTTGAAGAAGGATGCAGTAGAG 57.664 43.478 0.00 0.00 0.00 2.43
5859 6240 3.500343 AGAGGATTGGGTTCTTTGGTTG 58.500 45.455 0.00 0.00 0.00 3.77
5870 6251 1.069296 TCTTTGGTTGCGAGAAATGCG 60.069 47.619 0.00 0.00 34.24 4.73
5897 6278 3.074504 CATTGCGAATGCTTGCATACT 57.925 42.857 8.61 0.00 41.42 2.12
5920 6329 7.605449 ACTGCTGCATATAAAAAGTTGAACAT 58.395 30.769 1.31 0.00 0.00 2.71
5949 6358 3.307242 GCTAACCTGAAACTAGATGTGCG 59.693 47.826 0.00 0.00 0.00 5.34
5951 6360 1.623811 ACCTGAAACTAGATGTGCGGT 59.376 47.619 0.00 0.00 0.00 5.68
5965 6374 3.997762 TGTGCGGTTATTTAGAGTGTGT 58.002 40.909 0.00 0.00 0.00 3.72
5968 6377 3.244284 TGCGGTTATTTAGAGTGTGTGGT 60.244 43.478 0.00 0.00 0.00 4.16
6034 6446 2.044946 GGCTCCCGCATTCCTGTT 60.045 61.111 0.00 0.00 38.10 3.16
6043 6455 1.403647 CGCATTCCTGTTCACGGACTA 60.404 52.381 0.00 0.00 0.00 2.59
6050 6462 0.906775 TGTTCACGGACTAATCCCCC 59.093 55.000 0.00 0.00 42.83 5.40
6052 6464 1.134491 GTTCACGGACTAATCCCCCTG 60.134 57.143 0.00 0.00 42.83 4.45
6053 6465 0.042131 TCACGGACTAATCCCCCTGT 59.958 55.000 0.00 0.00 42.83 4.00
6054 6466 0.178068 CACGGACTAATCCCCCTGTG 59.822 60.000 0.00 0.00 42.83 3.66
6055 6467 1.146263 CGGACTAATCCCCCTGTGC 59.854 63.158 0.00 0.00 42.83 4.57
6100 6513 1.194781 AGGGTCAGCGTTGGAGATGT 61.195 55.000 0.00 0.00 0.00 3.06
6101 6514 0.741221 GGGTCAGCGTTGGAGATGTC 60.741 60.000 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 4.792521 TTCTTGCCTCTAAGACTGTCTC 57.207 45.455 11.31 0.00 36.48 3.36
80 81 4.091509 CCGAGACGACAAGAAAAACCATAG 59.908 45.833 0.00 0.00 0.00 2.23
92 93 1.893335 TGACGGACCGAGACGACAA 60.893 57.895 23.38 0.00 32.49 3.18
126 128 5.565509 TGCCCTAGAAATGTAATGTGACAA 58.434 37.500 0.00 0.00 31.83 3.18
127 129 5.172687 TGCCCTAGAAATGTAATGTGACA 57.827 39.130 0.00 0.00 0.00 3.58
128 130 6.699575 ATTGCCCTAGAAATGTAATGTGAC 57.300 37.500 0.00 0.00 0.00 3.67
130 132 8.188531 CAAAATTGCCCTAGAAATGTAATGTG 57.811 34.615 0.00 0.00 0.00 3.21
189 192 8.150945 AGTTGCACTAAGAGAAGAGAACAAATA 58.849 33.333 0.00 0.00 0.00 1.40
268 271 5.248640 CCTCCGCAACCTTCATATTCATAT 58.751 41.667 0.00 0.00 0.00 1.78
313 316 4.516698 ACGATCATGGAGGCAACAAATATC 59.483 41.667 0.00 0.00 41.41 1.63
368 374 2.766263 ACGTAGGATGGCAGAAGATTGA 59.234 45.455 0.00 0.00 0.00 2.57
372 378 1.847328 TCACGTAGGATGGCAGAAGA 58.153 50.000 0.00 0.00 0.00 2.87
385 391 2.925706 TGGCCCCAGCTTCACGTA 60.926 61.111 0.00 0.00 39.73 3.57
395 401 1.774217 AAGACTTCAGGTGGCCCCA 60.774 57.895 12.24 0.00 34.66 4.96
414 420 3.059570 GTGTGATCTCGTTTAGCGTGAAG 59.940 47.826 0.00 0.00 44.57 3.02
418 424 2.717580 TGTGTGATCTCGTTTAGCGT 57.282 45.000 0.00 0.00 42.13 5.07
422 428 4.242475 GTGGTCATGTGTGATCTCGTTTA 58.758 43.478 0.00 0.00 36.40 2.01
424 430 2.612972 GGTGGTCATGTGTGATCTCGTT 60.613 50.000 0.00 0.00 36.40 3.85
427 433 2.768253 TGGTGGTCATGTGTGATCTC 57.232 50.000 0.00 0.00 36.40 2.75
523 529 7.174599 GCCGAAAGAATACTCTGGTATAGTAGA 59.825 40.741 0.00 0.00 37.63 2.59
541 547 3.719173 AAAACGATTTTGGCCGAAAGA 57.281 38.095 22.52 1.66 0.00 2.52
542 548 7.569677 TTAATAAAACGATTTTGGCCGAAAG 57.430 32.000 22.52 12.86 34.19 2.62
570 576 5.048224 GTCTGCCTGGTCGCTATAATAACTA 60.048 44.000 0.00 0.00 0.00 2.24
571 577 3.895656 TCTGCCTGGTCGCTATAATAACT 59.104 43.478 0.00 0.00 0.00 2.24
580 586 2.210013 TCTTGTCTGCCTGGTCGCT 61.210 57.895 0.00 0.00 0.00 4.93
624 630 4.214310 TGGGTCCCATTTGTAAGCATATG 58.786 43.478 6.47 0.00 34.99 1.78
625 631 4.473444 CTGGGTCCCATTTGTAAGCATAT 58.527 43.478 12.23 0.00 30.82 1.78
626 632 3.897239 CTGGGTCCCATTTGTAAGCATA 58.103 45.455 12.23 0.00 30.82 3.14
627 633 2.738743 CTGGGTCCCATTTGTAAGCAT 58.261 47.619 12.23 0.00 30.82 3.79
628 634 1.890573 GCTGGGTCCCATTTGTAAGCA 60.891 52.381 12.23 0.00 30.82 3.91
647 653 6.621613 ACTAGGAATTTTCATTTTTCTCGGC 58.378 36.000 0.00 0.00 0.00 5.54
726 1003 2.440247 CCCGAGGGTGGGCATTTC 60.440 66.667 0.00 0.00 43.70 2.17
750 1028 0.662619 CTGCTGCGTTCAGGTTTCAA 59.337 50.000 0.00 0.00 40.65 2.69
873 1151 1.480954 GACTTGCTGGGATAAGGACGA 59.519 52.381 0.00 0.00 0.00 4.20
995 1273 3.866582 GATCCCCTGCTCCGGGTG 61.867 72.222 0.00 0.00 43.06 4.61
1124 1421 2.084546 CGCAAGAAAAGGGGTAAGGAG 58.915 52.381 0.00 0.00 43.02 3.69
1125 1422 1.422402 ACGCAAGAAAAGGGGTAAGGA 59.578 47.619 0.00 0.00 43.62 3.36
1126 1423 1.810755 GACGCAAGAAAAGGGGTAAGG 59.189 52.381 0.00 0.00 43.62 2.69
1127 1424 2.779506 AGACGCAAGAAAAGGGGTAAG 58.220 47.619 0.00 0.00 43.62 2.34
1178 1477 4.369182 CACGAACAAGTTACAGAAGACCT 58.631 43.478 0.00 0.00 0.00 3.85
1203 1503 4.208047 CAGAACGAGGATCAACATTCGATC 59.792 45.833 0.00 0.74 38.86 3.69
1386 1687 1.228956 TACCCCTGCGTACCACTGT 60.229 57.895 0.00 0.00 0.00 3.55
1420 1721 7.172019 GTGAGGAAACCTTTCAATTACGAACTA 59.828 37.037 0.00 0.00 38.92 2.24
1443 1744 7.391554 CAGGTTTTTCTGGATTCAATCTAGTGA 59.608 37.037 10.34 0.00 38.80 3.41
1447 1748 8.704849 TTTCAGGTTTTTCTGGATTCAATCTA 57.295 30.769 0.00 0.00 35.58 1.98
1609 1914 1.224069 CTCGGTCTGTTGCCTGTGTG 61.224 60.000 0.00 0.00 0.00 3.82
1659 1964 2.936919 TCAGCATGCGGGATCTAAAT 57.063 45.000 17.98 0.00 34.76 1.40
1691 1996 0.878416 GTGCATTGTCGGGTAAAGCA 59.122 50.000 0.00 0.00 0.00 3.91
1745 2050 9.791820 CTGCACAATTATCATGATAAAACAAGA 57.208 29.630 27.42 12.60 36.90 3.02
1885 2190 4.135306 TGGTTTTGTAGTGCGGTAATTCA 58.865 39.130 0.00 0.00 0.00 2.57
1907 2212 2.127651 TCTCTGTAAACCCCACCCTT 57.872 50.000 0.00 0.00 0.00 3.95
1918 2223 4.822350 CCGTCATCTGTAGGATCTCTGTAA 59.178 45.833 0.00 0.00 31.27 2.41
2071 2376 1.818642 CTTGACTGCCCTTCTTCCAG 58.181 55.000 0.00 0.00 0.00 3.86
2422 2727 7.775093 CAGGTCCTCTTGTTTATATCCATCAAA 59.225 37.037 0.00 0.00 0.00 2.69
2472 2777 2.976882 TGTAGCTAAACAGACAAGGGGT 59.023 45.455 0.00 0.00 0.00 4.95
2593 2899 4.089361 TCTGTTCAAGATCAGGAGCAGTA 58.911 43.478 21.31 11.40 41.40 2.74
2618 2924 1.304052 CCGGTGCCAGATTTCCCAA 60.304 57.895 0.00 0.00 0.00 4.12
2706 3012 2.629336 TTGTACAGATGCACCACACA 57.371 45.000 0.00 0.00 0.00 3.72
2749 3065 6.425721 GCAGGTGTACACTTAATTGACAAGTA 59.574 38.462 24.55 0.00 34.50 2.24
2755 3071 5.373222 AGTTGCAGGTGTACACTTAATTGA 58.627 37.500 24.55 3.84 0.00 2.57
2756 3072 5.470098 AGAGTTGCAGGTGTACACTTAATTG 59.530 40.000 24.55 15.45 0.00 2.32
2782 3098 6.881602 AGGATTGACAGAAAATACTGGAGTTC 59.118 38.462 0.00 0.00 41.59 3.01
2814 3130 4.649674 AGTAATAGATTCCCTTCGACAGCA 59.350 41.667 0.00 0.00 0.00 4.41
2836 3152 6.053005 TCGAGGGTGCCTAAAATACAATTAG 58.947 40.000 0.00 0.00 31.76 1.73
2842 3158 7.609056 TCTATAATCGAGGGTGCCTAAAATAC 58.391 38.462 0.00 0.00 31.76 1.89
2843 3159 7.786046 TCTATAATCGAGGGTGCCTAAAATA 57.214 36.000 0.00 0.00 31.76 1.40
2876 3192 7.574607 ACCATTAAGCTAGCTTACCTGTTAAT 58.425 34.615 31.98 21.23 38.14 1.40
2914 3230 3.887110 TCATTGCTTCTGCCATTAGGATG 59.113 43.478 0.00 0.00 38.71 3.51
2951 3268 6.653526 TGCATCAATAAACTTATGGGATGG 57.346 37.500 17.44 7.35 36.85 3.51
3063 3380 6.677781 TGTGAAAGAATCAAAGAAACGACT 57.322 33.333 0.00 0.00 40.50 4.18
3083 3400 3.162202 TGACAACACCAGCAATTTGTG 57.838 42.857 0.00 0.00 32.34 3.33
3086 3403 4.141756 TGGAAATGACAACACCAGCAATTT 60.142 37.500 0.00 0.00 0.00 1.82
3107 3424 4.818534 AACGATATAACAGCTGCATTGG 57.181 40.909 15.27 0.00 0.00 3.16
3126 3445 5.576774 GCTAATTGGGCTGTGATTGTTAAAC 59.423 40.000 0.00 0.00 0.00 2.01
3187 3507 3.264104 CAATGCAATGGTCCAATGGAAC 58.736 45.455 11.06 11.06 40.41 3.62
3216 3540 1.067142 TCGCCAGGTGTATTCAGTGTC 60.067 52.381 0.00 0.00 0.00 3.67
3288 3612 9.868277 TGAAAAAGAAAATACAACACAACTGAT 57.132 25.926 0.00 0.00 0.00 2.90
3455 3779 1.279846 GTACCTTCCCGGGTCAATGAA 59.720 52.381 22.86 4.94 40.48 2.57
3547 3871 5.543507 TGAATTTTTAAAAGCTGGGCTCA 57.456 34.783 0.14 0.00 38.25 4.26
3621 3948 2.251409 ACATAGCGAGCATCTGCATT 57.749 45.000 4.79 0.00 45.16 3.56
3634 3961 9.878599 AGATATTTTTATTTGTGCGTACATAGC 57.121 29.630 7.30 0.00 36.53 2.97
3671 3998 8.865001 GCAGAAACTCTCTACATACTTGTAAAG 58.135 37.037 0.00 0.00 40.90 1.85
3692 4019 4.523558 TGAATTCCACATGAACATGCAGAA 59.476 37.500 13.71 15.37 42.39 3.02
3724 4053 8.584063 TTACAAACCCATATTTAGAACTTCCC 57.416 34.615 0.00 0.00 0.00 3.97
3771 4101 1.213926 CTTTTGGCTCCCAGGCTAGAT 59.786 52.381 0.00 0.00 41.96 1.98
3773 4103 0.329596 ACTTTTGGCTCCCAGGCTAG 59.670 55.000 0.00 0.00 41.96 3.42
3776 4106 1.979155 GGACTTTTGGCTCCCAGGC 60.979 63.158 0.00 0.00 41.77 4.85
3777 4107 0.895559 GTGGACTTTTGGCTCCCAGG 60.896 60.000 0.00 0.00 33.81 4.45
3778 4108 0.178992 TGTGGACTTTTGGCTCCCAG 60.179 55.000 0.00 0.00 33.81 4.45
3779 4109 0.467290 GTGTGGACTTTTGGCTCCCA 60.467 55.000 0.00 0.00 0.00 4.37
3780 4110 0.178990 AGTGTGGACTTTTGGCTCCC 60.179 55.000 0.00 0.00 0.00 4.30
3781 4111 1.692411 AAGTGTGGACTTTTGGCTCC 58.308 50.000 0.00 0.00 39.56 4.70
3789 4119 7.742767 AGTAGTAAACCATAAAGTGTGGACTT 58.257 34.615 0.00 0.00 44.79 3.01
3790 4120 7.312415 AGTAGTAAACCATAAAGTGTGGACT 57.688 36.000 0.00 0.00 39.12 3.85
3791 4121 9.662947 AATAGTAGTAAACCATAAAGTGTGGAC 57.337 33.333 0.00 0.00 39.12 4.02
3800 4130 9.740239 CAGCGAAGTAATAGTAGTAAACCATAA 57.260 33.333 0.00 0.00 0.00 1.90
3801 4131 9.123902 TCAGCGAAGTAATAGTAGTAAACCATA 57.876 33.333 0.00 0.00 0.00 2.74
3802 4132 7.919621 GTCAGCGAAGTAATAGTAGTAAACCAT 59.080 37.037 0.00 0.00 0.00 3.55
3803 4133 7.094248 TGTCAGCGAAGTAATAGTAGTAAACCA 60.094 37.037 0.00 0.00 0.00 3.67
3804 4134 7.219726 GTGTCAGCGAAGTAATAGTAGTAAACC 59.780 40.741 0.00 0.00 0.00 3.27
3805 4135 7.967303 AGTGTCAGCGAAGTAATAGTAGTAAAC 59.033 37.037 0.00 0.00 0.00 2.01
3806 4136 8.048534 AGTGTCAGCGAAGTAATAGTAGTAAA 57.951 34.615 0.00 0.00 0.00 2.01
3807 4137 7.621428 AGTGTCAGCGAAGTAATAGTAGTAA 57.379 36.000 0.00 0.00 0.00 2.24
3808 4138 7.984050 AGTAGTGTCAGCGAAGTAATAGTAGTA 59.016 37.037 0.00 0.00 0.00 1.82
3822 4152 1.139734 ATCGGCAGTAGTGTCAGCG 59.860 57.895 2.55 0.00 0.00 5.18
3835 4165 3.621794 GCACATCTGAAATAACATCGGC 58.378 45.455 0.00 0.00 0.00 5.54
3905 4235 2.171003 CATTCAGAGGGGGTGTTTTCC 58.829 52.381 0.00 0.00 0.00 3.13
3953 4283 9.421806 CATGCTAAAAATATTGGAACAGAAACA 57.578 29.630 0.00 0.00 42.39 2.83
3954 4284 9.423061 ACATGCTAAAAATATTGGAACAGAAAC 57.577 29.630 0.00 0.00 42.39 2.78
4004 4350 6.459298 GGCCTGAAGACAAATCATAGTTGATG 60.459 42.308 0.00 0.00 41.83 3.07
4006 4352 4.943705 GGCCTGAAGACAAATCATAGTTGA 59.056 41.667 0.00 0.00 36.00 3.18
4009 4355 4.521146 CAGGCCTGAAGACAAATCATAGT 58.479 43.478 29.88 0.00 0.00 2.12
4010 4356 3.314635 GCAGGCCTGAAGACAAATCATAG 59.685 47.826 37.21 3.84 0.00 2.23
4021 4375 3.760684 ACAGAAAATTAGCAGGCCTGAAG 59.239 43.478 37.21 11.05 0.00 3.02
4085 4440 4.769688 TCACACTTCATTCACTGTCAGTT 58.230 39.130 1.67 0.00 0.00 3.16
4146 4501 9.265862 AGAATCCTAACTTCCCATCTATATGAG 57.734 37.037 0.00 0.00 34.84 2.90
4155 4510 7.989947 TTGTAGTAGAATCCTAACTTCCCAT 57.010 36.000 0.00 0.00 0.00 4.00
4238 4593 8.237267 GGTTACAACTTACAAGAGAAATGGATG 58.763 37.037 0.00 0.00 0.00 3.51
4239 4594 8.164070 AGGTTACAACTTACAAGAGAAATGGAT 58.836 33.333 0.00 0.00 0.00 3.41
4254 4609 7.552459 AGCAAATTTGTGTAAGGTTACAACTT 58.448 30.769 19.03 0.00 44.46 2.66
4259 4614 7.764695 AACAAGCAAATTTGTGTAAGGTTAC 57.235 32.000 19.03 0.00 40.24 2.50
4268 4630 3.061831 TGCGTCAAACAAGCAAATTTGTG 59.938 39.130 19.03 12.72 40.24 3.33
4284 4646 1.098712 GGTGGAAACCAACTGCGTCA 61.099 55.000 0.00 0.00 38.38 4.35
4315 4677 6.599244 TCAGATGAGGCGTCATTAAAATTCTT 59.401 34.615 21.91 0.00 43.92 2.52
4323 4685 3.885724 TTGTCAGATGAGGCGTCATTA 57.114 42.857 21.91 9.18 43.92 1.90
4371 4733 2.669670 GCATACCTCAGATCGTGGATCG 60.670 54.545 11.03 0.00 43.17 3.69
4379 4741 6.107901 AGACCATTAAGCATACCTCAGATC 57.892 41.667 0.00 0.00 0.00 2.75
4456 4824 0.739462 CCTACGCGCAAGGAATCACA 60.739 55.000 20.52 0.00 36.08 3.58
4471 4839 1.226888 GACGATGGCACGGACCTAC 60.227 63.158 12.66 0.00 37.61 3.18
4656 5024 3.364366 CGCATGAACAACAGAGAGTTTCC 60.364 47.826 0.00 0.00 38.74 3.13
4666 5034 6.972901 TGTGTAAATTTTACGCATGAACAACA 59.027 30.769 24.49 12.79 33.58 3.33
4667 5035 7.383050 TGTGTAAATTTTACGCATGAACAAC 57.617 32.000 24.49 10.86 33.58 3.32
4674 5042 6.432107 ACGAGTTTGTGTAAATTTTACGCAT 58.568 32.000 27.22 17.35 37.71 4.73
4687 5055 5.467705 GTGGATAGACTTACGAGTTTGTGT 58.532 41.667 0.00 0.00 35.88 3.72
4701 5071 5.353123 TCTTTTATTGCGTTGGTGGATAGAC 59.647 40.000 0.00 0.00 0.00 2.59
4719 5089 5.236478 CCTCTGTTCTGTCGCTTTTCTTTTA 59.764 40.000 0.00 0.00 0.00 1.52
4724 5094 2.755650 TCCTCTGTTCTGTCGCTTTTC 58.244 47.619 0.00 0.00 0.00 2.29
4725 5095 2.910688 TCCTCTGTTCTGTCGCTTTT 57.089 45.000 0.00 0.00 0.00 2.27
4743 5113 5.239525 AGTTCCACAAGCACTATCAGTTTTC 59.760 40.000 0.00 0.00 0.00 2.29
4954 5324 3.134262 TCCATCCTCTTCTTCATGAGCAG 59.866 47.826 0.00 0.00 0.00 4.24
5018 5388 7.971168 GCGCCATATGATATGTCCTAGTATATC 59.029 40.741 11.20 9.98 37.00 1.63
5023 5393 4.026744 AGCGCCATATGATATGTCCTAGT 58.973 43.478 2.29 0.00 0.00 2.57
5024 5394 4.366586 CAGCGCCATATGATATGTCCTAG 58.633 47.826 2.29 0.00 0.00 3.02
5054 5426 7.387265 TGTTTCCTATAATCCCTATGCTCAA 57.613 36.000 0.00 0.00 0.00 3.02
5106 5479 2.029288 CACGACACCAGCGAGCATT 61.029 57.895 0.00 0.00 0.00 3.56
5150 5523 3.992943 AATTATCCGTTCACAGGACCA 57.007 42.857 0.00 0.00 41.10 4.02
5164 5537 9.449550 TTCATAACGAATGCATCACAAATTATC 57.550 29.630 0.00 0.00 35.38 1.75
5217 5591 5.034797 CACTTCAAAGAAAACCGGAAGAAC 58.965 41.667 9.46 0.00 38.59 3.01
5220 5594 3.181491 TGCACTTCAAAGAAAACCGGAAG 60.181 43.478 9.46 0.00 40.50 3.46
5255 5630 1.008538 GGTGTTGCAAGGCGAGTTG 60.009 57.895 0.00 0.00 0.00 3.16
5308 5688 0.320771 GTCGGAGCACACCATGTCTT 60.321 55.000 0.00 0.00 0.00 3.01
5405 5785 1.367471 GAACCAAACAGGGCCTTGC 59.633 57.895 16.02 0.00 43.89 4.01
5406 5786 0.675633 CTGAACCAAACAGGGCCTTG 59.324 55.000 14.35 14.35 43.89 3.61
5407 5787 1.115326 GCTGAACCAAACAGGGCCTT 61.115 55.000 1.32 0.00 43.89 4.35
5408 5788 1.531602 GCTGAACCAAACAGGGCCT 60.532 57.895 0.00 0.00 43.89 5.19
5409 5789 1.115326 AAGCTGAACCAAACAGGGCC 61.115 55.000 0.00 0.00 43.89 5.80
5410 5790 0.752658 AAAGCTGAACCAAACAGGGC 59.247 50.000 0.00 0.00 43.89 5.19
5411 5791 4.615912 CGATAAAAGCTGAACCAAACAGGG 60.616 45.833 0.00 0.00 43.89 4.45
5412 5792 4.215399 TCGATAAAAGCTGAACCAAACAGG 59.785 41.667 0.00 0.00 45.67 4.00
5413 5793 5.147162 GTCGATAAAAGCTGAACCAAACAG 58.853 41.667 0.00 0.00 38.27 3.16
5414 5794 4.319190 CGTCGATAAAAGCTGAACCAAACA 60.319 41.667 0.00 0.00 0.00 2.83
5415 5795 4.148891 CGTCGATAAAAGCTGAACCAAAC 58.851 43.478 0.00 0.00 0.00 2.93
5416 5796 3.187637 CCGTCGATAAAAGCTGAACCAAA 59.812 43.478 0.00 0.00 0.00 3.28
5417 5797 2.739913 CCGTCGATAAAAGCTGAACCAA 59.260 45.455 0.00 0.00 0.00 3.67
5418 5798 2.028839 TCCGTCGATAAAAGCTGAACCA 60.029 45.455 0.00 0.00 0.00 3.67
5419 5799 2.613691 TCCGTCGATAAAAGCTGAACC 58.386 47.619 0.00 0.00 0.00 3.62
5420 5800 4.260253 GGAATCCGTCGATAAAAGCTGAAC 60.260 45.833 0.00 0.00 0.00 3.18
5421 5801 3.869246 GGAATCCGTCGATAAAAGCTGAA 59.131 43.478 0.00 0.00 0.00 3.02
5422 5802 3.454375 GGAATCCGTCGATAAAAGCTGA 58.546 45.455 0.00 0.00 0.00 4.26
5423 5803 2.218759 CGGAATCCGTCGATAAAAGCTG 59.781 50.000 14.46 0.00 42.73 4.24
5424 5804 2.470821 CGGAATCCGTCGATAAAAGCT 58.529 47.619 14.46 0.00 42.73 3.74
5425 5805 2.924432 CGGAATCCGTCGATAAAAGC 57.076 50.000 14.46 0.00 42.73 3.51
5444 5824 2.875786 GATTCTGCTGCGCGGTAGC 61.876 63.158 27.33 19.37 41.49 3.58
5445 5825 1.227089 AGATTCTGCTGCGCGGTAG 60.227 57.895 26.40 26.40 36.18 3.18
5446 5826 1.519234 CAGATTCTGCTGCGCGGTA 60.519 57.895 19.23 13.24 36.18 4.02
5447 5827 2.786539 TTCAGATTCTGCTGCGCGGT 62.787 55.000 19.23 0.00 36.18 5.68
5448 5828 2.102438 TTCAGATTCTGCTGCGCGG 61.102 57.895 13.18 13.18 35.86 6.46
5449 5829 1.059994 GTTCAGATTCTGCTGCGCG 59.940 57.895 8.89 0.00 35.86 6.86
5450 5830 1.300971 TGGTTCAGATTCTGCTGCGC 61.301 55.000 8.89 0.00 35.86 6.09
5451 5831 1.159285 TTGGTTCAGATTCTGCTGCG 58.841 50.000 8.89 0.00 35.86 5.18
5452 5832 2.094854 CCTTTGGTTCAGATTCTGCTGC 60.095 50.000 8.89 0.00 35.86 5.25
5453 5833 2.490903 CCCTTTGGTTCAGATTCTGCTG 59.509 50.000 8.89 0.00 37.24 4.41
5454 5834 2.800250 CCCTTTGGTTCAGATTCTGCT 58.200 47.619 8.89 0.00 0.00 4.24
5455 5835 1.203287 GCCCTTTGGTTCAGATTCTGC 59.797 52.381 8.89 0.00 0.00 4.26
5456 5836 2.517959 TGCCCTTTGGTTCAGATTCTG 58.482 47.619 7.38 7.38 0.00 3.02
5457 5837 2.978156 TGCCCTTTGGTTCAGATTCT 57.022 45.000 0.00 0.00 0.00 2.40
5458 5838 4.221482 AGATTTGCCCTTTGGTTCAGATTC 59.779 41.667 0.00 0.00 0.00 2.52
5459 5839 4.162651 AGATTTGCCCTTTGGTTCAGATT 58.837 39.130 0.00 0.00 0.00 2.40
5460 5840 3.782992 AGATTTGCCCTTTGGTTCAGAT 58.217 40.909 0.00 0.00 0.00 2.90
5461 5841 3.243359 AGATTTGCCCTTTGGTTCAGA 57.757 42.857 0.00 0.00 0.00 3.27
5462 5842 3.119352 GCTAGATTTGCCCTTTGGTTCAG 60.119 47.826 0.00 0.00 0.00 3.02
5463 5843 2.825532 GCTAGATTTGCCCTTTGGTTCA 59.174 45.455 0.00 0.00 0.00 3.18
5464 5844 2.825532 TGCTAGATTTGCCCTTTGGTTC 59.174 45.455 0.00 0.00 0.00 3.62
5465 5845 2.827921 CTGCTAGATTTGCCCTTTGGTT 59.172 45.455 0.00 0.00 0.00 3.67
5466 5846 2.041620 TCTGCTAGATTTGCCCTTTGGT 59.958 45.455 0.00 0.00 0.00 3.67
5467 5847 2.726821 TCTGCTAGATTTGCCCTTTGG 58.273 47.619 0.00 0.00 0.00 3.28
5468 5848 4.996788 ATTCTGCTAGATTTGCCCTTTG 57.003 40.909 0.00 0.00 0.00 2.77
5469 5849 4.096984 CGAATTCTGCTAGATTTGCCCTTT 59.903 41.667 3.52 0.00 0.00 3.11
5470 5850 3.629398 CGAATTCTGCTAGATTTGCCCTT 59.371 43.478 3.52 0.00 0.00 3.95
5471 5851 3.118261 TCGAATTCTGCTAGATTTGCCCT 60.118 43.478 3.52 0.00 0.00 5.19
5472 5852 3.206150 TCGAATTCTGCTAGATTTGCCC 58.794 45.455 3.52 0.00 0.00 5.36
5473 5853 5.429957 AATCGAATTCTGCTAGATTTGCC 57.570 39.130 3.52 0.00 0.00 4.52
5474 5854 5.008019 TGGAATCGAATTCTGCTAGATTTGC 59.992 40.000 3.52 0.00 39.24 3.68
5475 5855 6.481313 TCTGGAATCGAATTCTGCTAGATTTG 59.519 38.462 3.52 0.00 39.24 2.32
5476 5856 6.586344 TCTGGAATCGAATTCTGCTAGATTT 58.414 36.000 3.52 0.00 39.24 2.17
5477 5857 6.166984 TCTGGAATCGAATTCTGCTAGATT 57.833 37.500 3.52 4.70 39.24 2.40
5478 5858 5.798125 TCTGGAATCGAATTCTGCTAGAT 57.202 39.130 3.52 0.00 39.24 1.98
5479 5859 5.598416 TTCTGGAATCGAATTCTGCTAGA 57.402 39.130 3.52 0.00 39.24 2.43
5480 5860 6.073331 GGATTTCTGGAATCGAATTCTGCTAG 60.073 42.308 3.52 0.00 44.21 3.42
5481 5861 5.760253 GGATTTCTGGAATCGAATTCTGCTA 59.240 40.000 3.52 0.00 44.21 3.49
5482 5862 4.578105 GGATTTCTGGAATCGAATTCTGCT 59.422 41.667 3.52 0.00 44.21 4.24
5483 5863 4.553547 CGGATTTCTGGAATCGAATTCTGC 60.554 45.833 3.52 0.00 44.21 4.26
5484 5864 4.553547 GCGGATTTCTGGAATCGAATTCTG 60.554 45.833 3.52 0.00 44.21 3.02
5485 5865 3.561725 GCGGATTTCTGGAATCGAATTCT 59.438 43.478 3.52 0.00 44.21 2.40
5486 5866 3.561725 AGCGGATTTCTGGAATCGAATTC 59.438 43.478 2.68 0.00 44.21 2.17
5487 5867 3.313526 CAGCGGATTTCTGGAATCGAATT 59.686 43.478 2.68 0.00 44.21 2.17
5488 5868 2.874701 CAGCGGATTTCTGGAATCGAAT 59.125 45.455 2.68 0.00 44.21 3.34
5489 5869 2.279741 CAGCGGATTTCTGGAATCGAA 58.720 47.619 2.68 0.00 44.21 3.71
5490 5870 1.939974 CAGCGGATTTCTGGAATCGA 58.060 50.000 2.68 0.00 44.21 3.59
5491 5871 0.305922 GCAGCGGATTTCTGGAATCG 59.694 55.000 2.68 0.40 44.21 3.34
5492 5872 0.665298 GGCAGCGGATTTCTGGAATC 59.335 55.000 0.00 0.00 42.84 2.52
5493 5873 0.034186 TGGCAGCGGATTTCTGGAAT 60.034 50.000 0.00 0.00 32.41 3.01
5494 5874 0.251121 TTGGCAGCGGATTTCTGGAA 60.251 50.000 0.00 0.00 32.41 3.53
5495 5875 0.251121 TTTGGCAGCGGATTTCTGGA 60.251 50.000 0.00 0.00 32.41 3.86
5496 5876 0.602562 TTTTGGCAGCGGATTTCTGG 59.397 50.000 0.00 0.00 32.41 3.86
5497 5877 2.165030 AGATTTTGGCAGCGGATTTCTG 59.835 45.455 0.00 0.00 34.79 3.02
5498 5878 2.165030 CAGATTTTGGCAGCGGATTTCT 59.835 45.455 0.00 0.00 0.00 2.52
5499 5879 2.164219 TCAGATTTTGGCAGCGGATTTC 59.836 45.455 0.00 0.00 0.00 2.17
5500 5880 2.170166 TCAGATTTTGGCAGCGGATTT 58.830 42.857 0.00 0.00 0.00 2.17
5501 5881 1.838112 TCAGATTTTGGCAGCGGATT 58.162 45.000 0.00 0.00 0.00 3.01
5502 5882 1.474077 GTTCAGATTTTGGCAGCGGAT 59.526 47.619 0.00 0.00 0.00 4.18
5503 5883 0.881118 GTTCAGATTTTGGCAGCGGA 59.119 50.000 0.00 0.00 0.00 5.54
5504 5884 0.109132 GGTTCAGATTTTGGCAGCGG 60.109 55.000 0.00 0.00 0.00 5.52
5505 5885 0.597568 TGGTTCAGATTTTGGCAGCG 59.402 50.000 0.00 0.00 0.00 5.18
5506 5886 2.818130 TTGGTTCAGATTTTGGCAGC 57.182 45.000 0.00 0.00 0.00 5.25
5507 5887 3.495753 GCTTTTGGTTCAGATTTTGGCAG 59.504 43.478 0.00 0.00 0.00 4.85
5508 5888 3.465871 GCTTTTGGTTCAGATTTTGGCA 58.534 40.909 0.00 0.00 0.00 4.92
5509 5889 2.476241 CGCTTTTGGTTCAGATTTTGGC 59.524 45.455 0.00 0.00 0.00 4.52
5510 5890 3.059166 CCGCTTTTGGTTCAGATTTTGG 58.941 45.455 0.00 0.00 0.00 3.28
5511 5891 3.976169 TCCGCTTTTGGTTCAGATTTTG 58.024 40.909 0.00 0.00 0.00 2.44
5512 5892 4.620982 CTTCCGCTTTTGGTTCAGATTTT 58.379 39.130 0.00 0.00 0.00 1.82
5513 5893 3.552890 GCTTCCGCTTTTGGTTCAGATTT 60.553 43.478 0.00 0.00 0.00 2.17
5514 5894 2.029918 GCTTCCGCTTTTGGTTCAGATT 60.030 45.455 0.00 0.00 0.00 2.40
5515 5895 1.541588 GCTTCCGCTTTTGGTTCAGAT 59.458 47.619 0.00 0.00 0.00 2.90
5516 5896 0.951558 GCTTCCGCTTTTGGTTCAGA 59.048 50.000 0.00 0.00 0.00 3.27
5517 5897 0.667993 TGCTTCCGCTTTTGGTTCAG 59.332 50.000 0.00 0.00 36.97 3.02
5518 5898 0.667993 CTGCTTCCGCTTTTGGTTCA 59.332 50.000 0.00 0.00 36.97 3.18
5519 5899 0.664466 GCTGCTTCCGCTTTTGGTTC 60.664 55.000 0.00 0.00 36.97 3.62
5520 5900 1.363807 GCTGCTTCCGCTTTTGGTT 59.636 52.632 0.00 0.00 36.97 3.67
5521 5901 2.564721 GGCTGCTTCCGCTTTTGGT 61.565 57.895 0.00 0.00 36.97 3.67
5522 5902 2.259511 GGCTGCTTCCGCTTTTGG 59.740 61.111 0.00 0.00 36.97 3.28
5523 5903 2.259511 GGGCTGCTTCCGCTTTTG 59.740 61.111 0.00 0.00 36.97 2.44
5524 5904 2.203480 TGGGCTGCTTCCGCTTTT 60.203 55.556 0.00 0.00 36.97 2.27
5525 5905 2.674380 CTGGGCTGCTTCCGCTTT 60.674 61.111 0.00 0.00 36.97 3.51
5526 5906 4.729918 CCTGGGCTGCTTCCGCTT 62.730 66.667 0.00 0.00 36.97 4.68
5530 5910 4.021925 ACGTCCTGGGCTGCTTCC 62.022 66.667 0.00 0.00 0.00 3.46
5531 5911 2.743928 CACGTCCTGGGCTGCTTC 60.744 66.667 0.00 0.00 0.00 3.86
5535 5915 2.281761 AAAGCACGTCCTGGGCTG 60.282 61.111 0.00 0.00 38.04 4.85
5536 5916 2.032681 GAAAGCACGTCCTGGGCT 59.967 61.111 0.00 0.00 40.14 5.19
5537 5917 3.056328 GGAAAGCACGTCCTGGGC 61.056 66.667 0.00 0.00 31.94 5.36
5538 5918 0.821711 TTTGGAAAGCACGTCCTGGG 60.822 55.000 0.00 0.00 36.03 4.45
5539 5919 1.028905 TTTTGGAAAGCACGTCCTGG 58.971 50.000 0.00 0.00 36.03 4.45
5540 5920 2.554032 AGATTTTGGAAAGCACGTCCTG 59.446 45.455 0.00 0.00 36.03 3.86
5541 5921 2.554032 CAGATTTTGGAAAGCACGTCCT 59.446 45.455 0.00 0.00 36.03 3.85
5542 5922 2.552315 TCAGATTTTGGAAAGCACGTCC 59.448 45.455 0.00 0.00 35.55 4.79
5543 5923 3.896648 TCAGATTTTGGAAAGCACGTC 57.103 42.857 0.00 0.00 0.00 4.34
5544 5924 4.321230 GGAATCAGATTTTGGAAAGCACGT 60.321 41.667 0.00 0.00 0.00 4.49
5545 5925 4.168760 GGAATCAGATTTTGGAAAGCACG 58.831 43.478 0.00 0.00 0.00 5.34
5546 5926 4.168760 CGGAATCAGATTTTGGAAAGCAC 58.831 43.478 0.00 0.00 0.00 4.40
5547 5927 3.367292 GCGGAATCAGATTTTGGAAAGCA 60.367 43.478 0.00 0.00 0.00 3.91
5548 5928 3.119352 AGCGGAATCAGATTTTGGAAAGC 60.119 43.478 0.00 0.00 0.00 3.51
5549 5929 4.418392 CAGCGGAATCAGATTTTGGAAAG 58.582 43.478 0.00 0.00 0.00 2.62
5550 5930 3.367292 GCAGCGGAATCAGATTTTGGAAA 60.367 43.478 0.00 0.00 0.00 3.13
5551 5931 2.164219 GCAGCGGAATCAGATTTTGGAA 59.836 45.455 0.00 0.00 0.00 3.53
5552 5932 1.745087 GCAGCGGAATCAGATTTTGGA 59.255 47.619 0.00 0.00 0.00 3.53
5553 5933 1.532505 CGCAGCGGAATCAGATTTTGG 60.533 52.381 7.00 0.00 0.00 3.28
5554 5934 1.818850 CGCAGCGGAATCAGATTTTG 58.181 50.000 7.00 0.00 0.00 2.44
5566 5946 3.342590 TCAAATTTTGACCCGCAGCGG 62.343 52.381 28.03 28.03 39.85 5.52
5567 5947 0.039617 TCAAATTTTGACCCGCAGCG 60.040 50.000 8.18 8.18 34.08 5.18
5568 5948 2.147436 TTCAAATTTTGACCCGCAGC 57.853 45.000 11.30 0.00 39.87 5.25
5569 5949 4.552572 GCTTTTTCAAATTTTGACCCGCAG 60.553 41.667 11.30 5.32 39.87 5.18
5570 5950 3.311048 GCTTTTTCAAATTTTGACCCGCA 59.689 39.130 11.30 0.00 39.87 5.69
5571 5951 3.559655 AGCTTTTTCAAATTTTGACCCGC 59.440 39.130 11.30 11.18 39.87 6.13
5572 5952 8.702163 ATATAGCTTTTTCAAATTTTGACCCG 57.298 30.769 11.30 2.74 39.87 5.28
5573 5953 9.651913 TGATATAGCTTTTTCAAATTTTGACCC 57.348 29.630 11.30 0.00 39.87 4.46
5582 5962 9.474920 CAAACCAGTTGATATAGCTTTTTCAAA 57.525 29.630 10.61 0.00 39.87 2.69
5583 5963 7.598493 GCAAACCAGTTGATATAGCTTTTTCAA 59.402 33.333 6.07 6.07 39.87 2.69
5584 5964 7.090173 GCAAACCAGTTGATATAGCTTTTTCA 58.910 34.615 0.00 0.00 39.87 2.69
5585 5965 6.531594 GGCAAACCAGTTGATATAGCTTTTTC 59.468 38.462 0.00 0.00 39.87 2.29
5586 5966 6.014669 TGGCAAACCAGTTGATATAGCTTTTT 60.015 34.615 0.00 0.00 42.67 1.94
5587 5967 5.480073 TGGCAAACCAGTTGATATAGCTTTT 59.520 36.000 0.00 0.00 42.67 2.27
5588 5968 5.016173 TGGCAAACCAGTTGATATAGCTTT 58.984 37.500 0.00 0.00 42.67 3.51
5589 5969 4.599041 TGGCAAACCAGTTGATATAGCTT 58.401 39.130 0.00 0.00 42.67 3.74
5590 5970 4.235079 TGGCAAACCAGTTGATATAGCT 57.765 40.909 0.00 0.00 42.67 3.32
5598 5978 9.775921 AATGTAGGTCATTTGGCAAACCAGTTG 62.776 40.741 16.00 9.43 43.33 3.16
5599 5979 7.874550 AATGTAGGTCATTTGGCAAACCAGTT 61.875 38.462 16.00 4.23 43.33 3.16
5600 5980 6.453317 AATGTAGGTCATTTGGCAAACCAGT 61.453 40.000 16.00 0.86 43.33 4.00
5601 5981 4.021192 AATGTAGGTCATTTGGCAAACCAG 60.021 41.667 16.00 8.58 43.33 4.00
5602 5982 3.900601 AATGTAGGTCATTTGGCAAACCA 59.099 39.130 16.00 1.33 43.33 3.67
5603 5983 4.535526 AATGTAGGTCATTTGGCAAACC 57.464 40.909 16.00 13.12 43.33 3.27
5625 6005 5.984926 GCTGTGGAAAATCTCATGTGAAAAA 59.015 36.000 0.90 0.00 0.00 1.94
5626 6006 5.302568 AGCTGTGGAAAATCTCATGTGAAAA 59.697 36.000 0.90 0.00 0.00 2.29
5627 6007 4.828939 AGCTGTGGAAAATCTCATGTGAAA 59.171 37.500 0.90 0.00 0.00 2.69
5628 6008 4.216902 CAGCTGTGGAAAATCTCATGTGAA 59.783 41.667 5.25 0.00 0.00 3.18
5629 6009 3.754850 CAGCTGTGGAAAATCTCATGTGA 59.245 43.478 5.25 0.00 0.00 3.58
5630 6010 3.504906 ACAGCTGTGGAAAATCTCATGTG 59.495 43.478 20.97 0.00 0.00 3.21
5631 6011 3.759581 ACAGCTGTGGAAAATCTCATGT 58.240 40.909 20.97 0.00 0.00 3.21
5632 6012 4.778534 AACAGCTGTGGAAAATCTCATG 57.221 40.909 22.49 0.00 0.00 3.07
5633 6013 5.796424 AAAACAGCTGTGGAAAATCTCAT 57.204 34.783 22.49 0.00 0.00 2.90
5634 6014 5.596836 AAAAACAGCTGTGGAAAATCTCA 57.403 34.783 22.49 0.00 0.00 3.27
5653 6033 5.291614 GCTGTGAAAAATCTGCTGTGAAAAA 59.708 36.000 0.00 0.00 0.00 1.94
5654 6034 4.805192 GCTGTGAAAAATCTGCTGTGAAAA 59.195 37.500 0.00 0.00 0.00 2.29
5655 6035 4.098349 AGCTGTGAAAAATCTGCTGTGAAA 59.902 37.500 0.00 0.00 37.44 2.69
5656 6036 3.633525 AGCTGTGAAAAATCTGCTGTGAA 59.366 39.130 0.00 0.00 37.44 3.18
5657 6037 3.216800 AGCTGTGAAAAATCTGCTGTGA 58.783 40.909 0.00 0.00 37.44 3.58
5658 6038 3.637998 AGCTGTGAAAAATCTGCTGTG 57.362 42.857 0.00 0.00 37.44 3.66
5659 6039 5.972107 AATAGCTGTGAAAAATCTGCTGT 57.028 34.783 0.00 0.00 38.77 4.40
5660 6040 7.647907 AAAAATAGCTGTGAAAAATCTGCTG 57.352 32.000 0.00 0.00 38.77 4.41
5661 6041 8.796475 TCTAAAAATAGCTGTGAAAAATCTGCT 58.204 29.630 0.00 0.00 40.71 4.24
5662 6042 8.970691 TCTAAAAATAGCTGTGAAAAATCTGC 57.029 30.769 0.00 0.00 0.00 4.26
5668 6048 9.691362 GTGGATTTCTAAAAATAGCTGTGAAAA 57.309 29.630 0.00 0.00 35.21 2.29
5669 6049 8.855110 TGTGGATTTCTAAAAATAGCTGTGAAA 58.145 29.630 0.00 0.00 35.21 2.69
5670 6050 8.402798 TGTGGATTTCTAAAAATAGCTGTGAA 57.597 30.769 0.00 0.00 35.21 3.18
5671 6051 7.362056 GCTGTGGATTTCTAAAAATAGCTGTGA 60.362 37.037 0.00 0.00 35.21 3.58
5672 6052 6.749118 GCTGTGGATTTCTAAAAATAGCTGTG 59.251 38.462 0.00 0.00 35.21 3.66
5673 6053 6.127619 GGCTGTGGATTTCTAAAAATAGCTGT 60.128 38.462 0.00 0.00 34.94 4.40
5674 6054 6.268566 GGCTGTGGATTTCTAAAAATAGCTG 58.731 40.000 0.00 0.00 34.94 4.24
5675 6055 5.066505 CGGCTGTGGATTTCTAAAAATAGCT 59.933 40.000 0.00 0.00 34.94 3.32
5676 6056 5.065988 TCGGCTGTGGATTTCTAAAAATAGC 59.934 40.000 0.00 0.00 35.21 2.97
5677 6057 6.677781 TCGGCTGTGGATTTCTAAAAATAG 57.322 37.500 0.00 0.00 35.21 1.73
5678 6058 6.127842 GGTTCGGCTGTGGATTTCTAAAAATA 60.128 38.462 0.00 0.00 35.21 1.40
5679 6059 5.336451 GGTTCGGCTGTGGATTTCTAAAAAT 60.336 40.000 0.00 0.00 37.80 1.82
5680 6060 4.022676 GGTTCGGCTGTGGATTTCTAAAAA 60.023 41.667 0.00 0.00 0.00 1.94
5681 6061 3.504520 GGTTCGGCTGTGGATTTCTAAAA 59.495 43.478 0.00 0.00 0.00 1.52
5682 6062 3.078837 GGTTCGGCTGTGGATTTCTAAA 58.921 45.455 0.00 0.00 0.00 1.85
5683 6063 2.039216 TGGTTCGGCTGTGGATTTCTAA 59.961 45.455 0.00 0.00 0.00 2.10
5684 6064 1.626321 TGGTTCGGCTGTGGATTTCTA 59.374 47.619 0.00 0.00 0.00 2.10
5685 6065 0.400213 TGGTTCGGCTGTGGATTTCT 59.600 50.000 0.00 0.00 0.00 2.52
5686 6066 1.243902 TTGGTTCGGCTGTGGATTTC 58.756 50.000 0.00 0.00 0.00 2.17
5687 6067 1.339929 GTTTGGTTCGGCTGTGGATTT 59.660 47.619 0.00 0.00 0.00 2.17
5688 6068 0.958822 GTTTGGTTCGGCTGTGGATT 59.041 50.000 0.00 0.00 0.00 3.01
5689 6069 0.179004 TGTTTGGTTCGGCTGTGGAT 60.179 50.000 0.00 0.00 0.00 3.41
5690 6070 0.817634 CTGTTTGGTTCGGCTGTGGA 60.818 55.000 0.00 0.00 0.00 4.02
5691 6071 1.654220 CTGTTTGGTTCGGCTGTGG 59.346 57.895 0.00 0.00 0.00 4.17
5692 6072 1.654220 CCTGTTTGGTTCGGCTGTG 59.346 57.895 0.00 0.00 0.00 3.66
5693 6073 1.528309 CCCTGTTTGGTTCGGCTGT 60.528 57.895 0.00 0.00 0.00 4.40
5694 6074 2.919494 GCCCTGTTTGGTTCGGCTG 61.919 63.158 0.00 0.00 36.65 4.85
5695 6075 2.597510 GCCCTGTTTGGTTCGGCT 60.598 61.111 0.00 0.00 36.65 5.52
5696 6076 2.757980 TAGGCCCTGTTTGGTTCGGC 62.758 60.000 0.00 0.00 38.96 5.54
5697 6077 0.034477 ATAGGCCCTGTTTGGTTCGG 60.034 55.000 0.00 0.00 0.00 4.30
5698 6078 2.093128 AGTATAGGCCCTGTTTGGTTCG 60.093 50.000 0.00 0.00 0.00 3.95
5699 6079 3.646736 AGTATAGGCCCTGTTTGGTTC 57.353 47.619 0.00 0.00 0.00 3.62
5700 6080 4.086457 CAAAGTATAGGCCCTGTTTGGTT 58.914 43.478 0.00 0.00 0.00 3.67
5701 6081 3.697166 CAAAGTATAGGCCCTGTTTGGT 58.303 45.455 0.00 0.00 0.00 3.67
5702 6082 2.427095 GCAAAGTATAGGCCCTGTTTGG 59.573 50.000 0.00 0.00 0.00 3.28
5703 6083 2.427095 GGCAAAGTATAGGCCCTGTTTG 59.573 50.000 0.00 4.19 41.90 2.93
5704 6084 2.735151 GGCAAAGTATAGGCCCTGTTT 58.265 47.619 0.00 0.00 41.90 2.83
5705 6085 2.437085 GGCAAAGTATAGGCCCTGTT 57.563 50.000 0.00 0.00 41.90 3.16
5711 6091 2.959465 ATCAGGGGCAAAGTATAGGC 57.041 50.000 0.00 0.00 0.00 3.93
5712 6092 3.910627 AGGTATCAGGGGCAAAGTATAGG 59.089 47.826 0.00 0.00 0.00 2.57
5713 6093 6.127026 GGATAGGTATCAGGGGCAAAGTATAG 60.127 46.154 0.00 0.00 34.40 1.31
5714 6094 5.724854 GGATAGGTATCAGGGGCAAAGTATA 59.275 44.000 0.00 0.00 34.40 1.47
5715 6095 4.536489 GGATAGGTATCAGGGGCAAAGTAT 59.464 45.833 0.00 0.00 34.40 2.12
5727 6107 8.564574 GCAAAAATTATCAACGGATAGGTATCA 58.435 33.333 0.00 0.00 37.31 2.15
5742 6123 4.044426 GCATCCGGTCAGCAAAAATTATC 58.956 43.478 0.00 0.00 0.00 1.75
5798 6179 5.880332 TCAAGATGAAGATTAAAGGAACGGG 59.120 40.000 0.00 0.00 0.00 5.28
5839 6220 2.029020 GCAACCAAAGAACCCAATCCTC 60.029 50.000 0.00 0.00 0.00 3.71
5896 6277 8.470040 AATGTTCAACTTTTTATATGCAGCAG 57.530 30.769 0.00 0.00 0.00 4.24
5897 6278 8.830201 AAATGTTCAACTTTTTATATGCAGCA 57.170 26.923 0.00 0.00 0.00 4.41
5932 6341 2.386661 ACCGCACATCTAGTTTCAGG 57.613 50.000 0.00 0.00 0.00 3.86
5945 6354 3.124636 CCACACACTCTAAATAACCGCAC 59.875 47.826 0.00 0.00 0.00 5.34
5949 6358 5.790593 TCAGACCACACACTCTAAATAACC 58.209 41.667 0.00 0.00 0.00 2.85
5951 6360 8.740123 TTTTTCAGACCACACACTCTAAATAA 57.260 30.769 0.00 0.00 0.00 1.40
5980 6389 0.953727 CGCATACATCCACCCCAATG 59.046 55.000 0.00 0.00 0.00 2.82
5982 6391 1.225983 CCGCATACATCCACCCCAA 59.774 57.895 0.00 0.00 0.00 4.12
5983 6392 2.915079 CCGCATACATCCACCCCA 59.085 61.111 0.00 0.00 0.00 4.96
6034 6446 0.042131 ACAGGGGGATTAGTCCGTGA 59.958 55.000 8.72 0.00 46.09 4.35
6043 6455 3.329889 TCTGCGCACAGGGGGATT 61.330 61.111 5.66 0.00 44.59 3.01
6050 6462 3.857854 GCATCCGTCTGCGCACAG 61.858 66.667 5.66 0.00 45.95 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.