Multiple sequence alignment - TraesCS2A01G146200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G146200 chr2A 100.000 5845 0 0 1 5845 90758365 90764209 0.000000e+00 10794.0
1 TraesCS2A01G146200 chr2A 100.000 552 0 0 6049 6600 90764413 90764964 0.000000e+00 1020.0
2 TraesCS2A01G146200 chr2A 81.690 284 30 14 1255 1530 118442036 118442305 4.010000e-52 217.0
3 TraesCS2A01G146200 chr2D 93.577 5932 229 70 1 5845 93081618 93087484 0.000000e+00 8704.0
4 TraesCS2A01G146200 chr2D 91.257 183 3 5 6049 6224 93087540 93087716 3.080000e-58 237.0
5 TraesCS2A01G146200 chr2B 93.902 5772 213 52 154 5842 144649391 144655106 0.000000e+00 8580.0
6 TraesCS2A01G146200 chr2B 96.842 380 12 0 6221 6600 184386001 184385622 2.600000e-178 636.0
7 TraesCS2A01G146200 chr2B 91.291 333 27 2 1212 1544 728194897 728194567 2.810000e-123 453.0
8 TraesCS2A01G146200 chr2B 88.253 332 34 3 1212 1543 26157232 26156906 6.200000e-105 392.0
9 TraesCS2A01G146200 chr2B 95.455 176 4 4 6049 6224 144655165 144655336 1.810000e-70 278.0
10 TraesCS2A01G146200 chr2B 88.202 178 5 6 3 167 144649122 144649296 1.450000e-46 198.0
11 TraesCS2A01G146200 chr3B 91.322 726 46 5 2187 2895 211638023 211637298 0.000000e+00 976.0
12 TraesCS2A01G146200 chr3B 96.316 380 14 0 6221 6600 61702466 61702087 5.620000e-175 625.0
13 TraesCS2A01G146200 chr3B 96.316 380 14 0 6221 6600 82341825 82342204 5.620000e-175 625.0
14 TraesCS2A01G146200 chr6A 97.368 380 10 0 6221 6600 93077242 93077621 0.000000e+00 647.0
15 TraesCS2A01G146200 chr6A 96.842 380 12 0 6221 6600 40272327 40272706 2.600000e-178 636.0
16 TraesCS2A01G146200 chr5A 97.105 380 11 0 6221 6600 502898235 502897856 5.580000e-180 641.0
17 TraesCS2A01G146200 chr1B 96.850 381 12 0 6220 6600 46013955 46014335 7.220000e-179 638.0
18 TraesCS2A01G146200 chr5B 96.579 380 13 0 6221 6600 682814414 682814035 1.210000e-176 630.0
19 TraesCS2A01G146200 chr5B 83.990 381 32 11 1347 1724 619125645 619125999 8.200000e-89 339.0
20 TraesCS2A01G146200 chr5B 83.990 381 32 11 1347 1724 619178937 619179291 8.200000e-89 339.0
21 TraesCS2A01G146200 chr1A 96.579 380 13 0 6221 6600 36552751 36553130 1.210000e-176 630.0
22 TraesCS2A01G146200 chr4B 83.774 530 53 14 1204 1724 622948508 622949013 7.750000e-129 472.0
23 TraesCS2A01G146200 chr3A 86.826 167 16 3 1352 1513 60197753 60197918 1.460000e-41 182.0
24 TraesCS2A01G146200 chr3D 92.857 42 3 0 1326 1367 511257541 511257500 1.990000e-05 62.1
25 TraesCS2A01G146200 chr3D 100.000 28 0 0 1324 1351 412226112 412226139 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G146200 chr2A 90758365 90764964 6599 False 5907.000000 10794 100.000000 1 6600 2 chr2A.!!$F2 6599
1 TraesCS2A01G146200 chr2D 93081618 93087716 6098 False 4470.500000 8704 92.417000 1 6224 2 chr2D.!!$F1 6223
2 TraesCS2A01G146200 chr2B 144649122 144655336 6214 False 3018.666667 8580 92.519667 3 6224 3 chr2B.!!$F1 6221
3 TraesCS2A01G146200 chr3B 211637298 211638023 725 True 976.000000 976 91.322000 2187 2895 1 chr3B.!!$R2 708
4 TraesCS2A01G146200 chr4B 622948508 622949013 505 False 472.000000 472 83.774000 1204 1724 1 chr4B.!!$F1 520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
145 154 0.111639 GTTGTTCCCTTGCCCTGGTA 59.888 55.0 0.00 0.0 0.00 3.25 F
2109 2336 0.040058 AGCCCCTGTGCATTCATTGA 59.960 50.0 0.00 0.0 0.00 2.57 F
2715 2963 0.599991 TAGTGCACTGCTGGACAACG 60.600 55.0 29.57 0.0 41.12 4.10 F
4287 4542 0.031857 CATGGCCTACTCTCTCTGCG 59.968 60.0 3.32 0.0 0.00 5.18 F
4359 4614 0.034476 TGACTGCCTCACAAGCTCTG 59.966 55.0 0.00 0.0 0.00 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2123 2350 0.971959 CCACCACCAATCCACCATGG 60.972 60.000 11.19 11.19 42.60 3.66 R
3546 3801 3.057736 CCACCTCTGCAAAACAAGAGATG 60.058 47.826 1.29 0.00 0.00 2.90 R
4561 4818 0.795085 CTCAAAGCAGACTTCCGCAG 59.205 55.000 0.00 0.00 34.05 5.18 R
5430 5694 0.109551 AGACGTGACAGTGATCAGCG 60.110 55.000 0.00 6.63 32.77 5.18 R
6297 6575 0.035458 GGGACTGGAGAACACACTGG 59.965 60.000 0.00 0.00 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 57 3.265221 GCAGGATCATTCTGGGATGGATA 59.735 47.826 0.00 0.00 33.16 2.59
56 61 5.666718 AGGATCATTCTGGGATGGATAGATC 59.333 44.000 0.00 0.00 0.00 2.75
57 62 7.326872 AGGATCATTCTGGGATGGATAGATCC 61.327 46.154 0.00 0.00 45.78 3.36
64 69 2.476199 GGATGGATAGATCCCCTGAGG 58.524 57.143 6.09 0.00 46.59 3.86
145 154 0.111639 GTTGTTCCCTTGCCCTGGTA 59.888 55.000 0.00 0.00 0.00 3.25
193 314 1.478654 GGCAACAGAAACAGGGGAGAA 60.479 52.381 0.00 0.00 0.00 2.87
208 329 6.667848 ACAGGGGAGAAAGAAAAAGAAAGAAA 59.332 34.615 0.00 0.00 0.00 2.52
280 422 4.143301 GGTCCCCATTGCCCTCCC 62.143 72.222 0.00 0.00 0.00 4.30
281 423 4.143301 GTCCCCATTGCCCTCCCC 62.143 72.222 0.00 0.00 0.00 4.81
282 424 4.386100 TCCCCATTGCCCTCCCCT 62.386 66.667 0.00 0.00 0.00 4.79
283 425 3.825623 CCCCATTGCCCTCCCCTC 61.826 72.222 0.00 0.00 0.00 4.30
284 426 3.825623 CCCATTGCCCTCCCCTCC 61.826 72.222 0.00 0.00 0.00 4.30
285 427 2.697644 CCATTGCCCTCCCCTCCT 60.698 66.667 0.00 0.00 0.00 3.69
365 507 3.056628 GCTACAGCTACAGCCACAG 57.943 57.895 7.36 0.00 43.38 3.66
366 508 1.086634 GCTACAGCTACAGCCACAGC 61.087 60.000 7.36 0.56 43.38 4.40
425 567 0.252650 AAAGGCAGAGCTCCTCTCCT 60.253 55.000 10.93 8.89 42.90 3.69
475 627 4.945543 CCAATTCATCACAGGATTCACTCA 59.054 41.667 0.00 0.00 0.00 3.41
495 647 2.800881 CCAGCTGGGTGTTTCTTTTC 57.199 50.000 26.14 0.00 0.00 2.29
519 678 0.716591 TCCCCTTCCTTCCTAGCAGA 59.283 55.000 0.00 0.00 0.00 4.26
520 679 1.127343 CCCCTTCCTTCCTAGCAGAG 58.873 60.000 0.00 0.00 0.00 3.35
621 781 6.773976 TTGTTTGGTCACTTCAAGAATCTT 57.226 33.333 0.00 0.00 0.00 2.40
671 831 3.083349 CTCTGATCCGCCCACCCA 61.083 66.667 0.00 0.00 0.00 4.51
675 835 4.271016 GATCCGCCCACCCATCCC 62.271 72.222 0.00 0.00 0.00 3.85
680 840 4.512914 GCCCACCCATCCCTGCTC 62.513 72.222 0.00 0.00 0.00 4.26
681 841 2.693864 CCCACCCATCCCTGCTCT 60.694 66.667 0.00 0.00 0.00 4.09
684 866 1.997311 CACCCATCCCTGCTCTGGA 60.997 63.158 0.00 0.00 36.05 3.86
708 892 0.524604 GTCGCGCTCTCTCTCTTTCC 60.525 60.000 5.56 0.00 0.00 3.13
710 894 0.248458 CGCGCTCTCTCTCTTTCCTC 60.248 60.000 5.56 0.00 0.00 3.71
713 897 1.405105 CGCTCTCTCTCTTTCCTCCTG 59.595 57.143 0.00 0.00 0.00 3.86
751 935 1.515020 CTGGGTTCTCTGCGAGGAG 59.485 63.158 5.87 0.00 34.88 3.69
773 957 1.657751 GATTCTGGCGGCCTGGTTTC 61.658 60.000 23.42 14.49 0.00 2.78
774 958 2.142292 ATTCTGGCGGCCTGGTTTCT 62.142 55.000 23.42 3.97 0.00 2.52
939 1131 1.981853 GGGGCAATTTTCTGGGCGA 60.982 57.895 0.00 0.00 0.00 5.54
1014 1206 0.107945 GCTCCATGGGTCTCTGTCAC 60.108 60.000 13.02 0.00 0.00 3.67
1461 1670 3.649277 CTTCGGCTACACCTGCGCT 62.649 63.158 9.73 0.00 35.61 5.92
1544 1758 3.552875 CCAAGGTCCGATACTCACTCTA 58.447 50.000 0.00 0.00 0.00 2.43
1552 1766 2.411676 CGATACTCACTCTATCACGCCG 60.412 54.545 0.00 0.00 0.00 6.46
1557 1771 1.076923 ACTCTATCACGCCGTCCCT 60.077 57.895 0.00 0.00 0.00 4.20
1632 1848 2.495270 TGTCTCTGCCATTCAGTCTCTC 59.505 50.000 0.00 0.00 43.32 3.20
1655 1871 3.457234 CCGTCTATGTTCAGCTGCATAA 58.543 45.455 9.47 0.00 0.00 1.90
1694 1910 0.800012 TTTTCTACGCGTGATTGGGC 59.200 50.000 24.59 0.00 0.00 5.36
1851 2069 1.259609 TGCCTGCTTGAGATTTTGGG 58.740 50.000 0.00 0.00 0.00 4.12
1865 2083 2.500392 TTTGGGAAATCGGATCCGTT 57.500 45.000 32.15 22.54 37.87 4.44
1885 2103 2.698803 TGAGCTCGTGTTGCATATGTT 58.301 42.857 9.64 0.00 0.00 2.71
1889 2107 4.503910 AGCTCGTGTTGCATATGTTCTAA 58.496 39.130 4.29 0.00 0.00 2.10
1898 2116 8.715998 GTGTTGCATATGTTCTAATCCTATCAG 58.284 37.037 4.29 0.00 0.00 2.90
1985 2212 1.842381 GACTGTTGGTGGGAGGGAGG 61.842 65.000 0.00 0.00 0.00 4.30
1986 2213 2.531685 TGTTGGTGGGAGGGAGGG 60.532 66.667 0.00 0.00 0.00 4.30
1987 2214 2.204090 GTTGGTGGGAGGGAGGGA 60.204 66.667 0.00 0.00 0.00 4.20
1988 2215 2.124996 TTGGTGGGAGGGAGGGAG 59.875 66.667 0.00 0.00 0.00 4.30
2024 2251 2.269241 GGTAGGGCAAAGCTCGCT 59.731 61.111 7.90 2.25 32.17 4.93
2030 2257 4.410743 GCAAAGCTCGCTGCCACC 62.411 66.667 4.46 0.00 44.23 4.61
2031 2258 3.741476 CAAAGCTCGCTGCCACCC 61.741 66.667 0.00 0.00 44.23 4.61
2079 2306 2.288702 CCTGGTGAAGCTCATCTATCCG 60.289 54.545 0.00 0.00 0.00 4.18
2082 2309 2.564947 GGTGAAGCTCATCTATCCGGAT 59.435 50.000 22.95 22.95 0.00 4.18
2109 2336 0.040058 AGCCCCTGTGCATTCATTGA 59.960 50.000 0.00 0.00 0.00 2.57
2123 2350 5.461078 GCATTCATTGACTTAACATCATGGC 59.539 40.000 0.00 0.00 0.00 4.40
2185 2412 1.839994 TCCCCATGTCAATGTCCTCTC 59.160 52.381 0.00 0.00 31.27 3.20
2205 2436 9.184523 TCCTCTCTACTCTTCTTATCTTCTTTG 57.815 37.037 0.00 0.00 0.00 2.77
2389 2633 1.742761 TTATGAGCAGAGCTGGCAAC 58.257 50.000 9.43 4.10 39.88 4.17
2392 2636 1.744741 GAGCAGAGCTGGCAACCTC 60.745 63.158 9.43 6.70 39.88 3.85
2628 2876 5.282055 TGTTTCATTGTAAATGGGTTGCA 57.718 34.783 0.42 0.00 0.00 4.08
2715 2963 0.599991 TAGTGCACTGCTGGACAACG 60.600 55.000 29.57 0.00 41.12 4.10
2885 3133 4.870426 AGTTGCACGATCTTACCTGTAATG 59.130 41.667 0.00 0.00 0.00 1.90
2887 3135 4.180817 TGCACGATCTTACCTGTAATGTG 58.819 43.478 0.00 0.45 0.00 3.21
2900 3148 4.319046 CCTGTAATGTGCTATGTTCATCGC 60.319 45.833 2.96 2.96 0.00 4.58
3038 3290 2.338500 GCGTGCTAGCTGTTTAGAGTT 58.662 47.619 17.23 0.00 0.00 3.01
3376 3631 4.898829 TCCTATCAAAATTGACCATGCG 57.101 40.909 0.00 0.00 40.49 4.73
3477 3732 7.246171 ACTTGATAAGATATTGGCGAGGTAT 57.754 36.000 0.00 0.00 0.00 2.73
3539 3794 3.753294 ATATCTGCTGGGGTTCTAACG 57.247 47.619 0.00 0.00 0.00 3.18
3546 3801 3.321111 TGCTGGGGTTCTAACGATATCTC 59.679 47.826 0.34 0.00 0.00 2.75
3675 3930 2.716217 GGGATCTGAAACCAGAGGTTG 58.284 52.381 1.62 0.00 46.20 3.77
3712 3967 9.838339 ACACAGTTAGCAGCTAATATTAATTCT 57.162 29.630 18.00 5.13 0.00 2.40
3761 4016 2.711542 ACCTGGGAGTTTCTTAATGCG 58.288 47.619 0.00 0.00 0.00 4.73
3836 4091 1.732809 CTGTTCAGTCAGCAGATGCAG 59.267 52.381 7.68 0.00 45.16 4.41
3991 4246 7.437713 AGTCTAACATGGTCCATTCAGATTA 57.562 36.000 0.00 0.00 0.00 1.75
3996 4251 9.559732 CTAACATGGTCCATTCAGATTATTGTA 57.440 33.333 0.00 0.00 0.00 2.41
4245 4500 0.902984 TCCGAGCTGTCCTTAAGGCA 60.903 55.000 17.32 16.00 34.44 4.75
4287 4542 0.031857 CATGGCCTACTCTCTCTGCG 59.968 60.000 3.32 0.00 0.00 5.18
4359 4614 0.034476 TGACTGCCTCACAAGCTCTG 59.966 55.000 0.00 0.00 0.00 3.35
4399 4654 2.589798 GGCAGTGCCGTACAGTAATA 57.410 50.000 20.55 0.00 39.62 0.98
4408 4663 4.652421 TGCCGTACAGTAATATCCTCCTTT 59.348 41.667 0.00 0.00 0.00 3.11
4419 4676 9.453830 AGTAATATCCTCCTTTGGAAGACTATT 57.546 33.333 0.00 0.00 39.85 1.73
4422 4679 6.899892 ATCCTCCTTTGGAAGACTATTCTT 57.100 37.500 0.00 0.00 45.35 2.52
4561 4818 6.364706 CCGAGCTTATATCAGTTCATCTTCAC 59.635 42.308 2.28 0.00 0.00 3.18
4597 4854 4.682778 TTGAGGGTATACACTATGCACC 57.317 45.455 7.86 0.00 0.00 5.01
4602 4859 6.384595 TGAGGGTATACACTATGCACCTAAAA 59.615 38.462 7.86 0.00 0.00 1.52
4603 4860 6.589135 AGGGTATACACTATGCACCTAAAAC 58.411 40.000 5.64 0.00 0.00 2.43
4604 4861 6.157297 AGGGTATACACTATGCACCTAAAACA 59.843 38.462 5.64 0.00 0.00 2.83
4606 4863 7.501225 GGGTATACACTATGCACCTAAAACAAT 59.499 37.037 5.01 0.00 0.00 2.71
4611 4868 8.630054 ACACTATGCACCTAAAACAATCTTAA 57.370 30.769 0.00 0.00 0.00 1.85
4647 4910 8.199449 CCTATTGCAATTTGGTCTTCATTATGT 58.801 33.333 18.75 0.00 0.00 2.29
4733 4997 9.170890 TGGGTACTTGAGATATCCATATTCTTT 57.829 33.333 0.00 0.00 0.00 2.52
4768 5032 4.759693 ACATGTTGAATGTTCCTTTCGCTA 59.240 37.500 0.00 0.00 0.00 4.26
4782 5046 9.485206 GTTCCTTTCGCTATTATATAGGACAAA 57.515 33.333 0.00 0.00 30.50 2.83
4860 5124 6.183360 CCAATGAGCCATTTCTTATGGATGTT 60.183 38.462 7.94 0.00 41.64 2.71
4897 5161 3.133003 GCCCTAGCTAAGACATTGACAGA 59.867 47.826 0.00 0.00 35.50 3.41
4958 5222 3.053544 TGGGTCCAAACAAGAGTGGTTTA 60.054 43.478 0.00 0.00 36.38 2.01
5131 5395 2.769893 TGTTAACACGGTAAGCCTTCC 58.230 47.619 3.59 0.00 0.00 3.46
5188 5452 2.100631 CGCCGACTTACCTGCCAAG 61.101 63.158 0.00 0.00 0.00 3.61
5203 5467 5.131977 ACCTGCCAAGATTATGGTGTATACA 59.868 40.000 0.08 0.08 42.75 2.29
5238 5502 7.290014 ACCCTTCAGTACAGAAAATTGGATTTT 59.710 33.333 2.12 0.00 44.56 1.82
5247 5511 8.877808 ACAGAAAATTGGATTTTGAAGAGTTC 57.122 30.769 3.58 0.00 42.15 3.01
5250 5514 3.915437 TTGGATTTTGAAGAGTTCGCC 57.085 42.857 0.00 0.00 0.00 5.54
5413 5677 7.959733 TGTAGTCTGAACAGTTAATTTATGCG 58.040 34.615 1.73 0.00 0.00 4.73
5430 5694 3.811722 TGCGTGATCACTTGACATTTC 57.188 42.857 22.95 2.57 0.00 2.17
5431 5695 2.157474 TGCGTGATCACTTGACATTTCG 59.843 45.455 22.95 7.41 0.00 3.46
5444 5709 2.995939 GACATTTCGCTGATCACTGTCA 59.004 45.455 0.00 0.00 33.49 3.58
5569 5834 2.472695 TCATAAAGCTCTTGCACGGT 57.527 45.000 0.00 0.00 42.74 4.83
5622 5888 7.693952 TGAGACGGAAACAAGCATTATTATTC 58.306 34.615 0.00 0.00 0.00 1.75
5739 6010 3.554692 GACGATGGCTTGCGACCG 61.555 66.667 0.00 0.00 0.00 4.79
5749 6020 3.629883 TTGCGACCGCGACCGTAAT 62.630 57.895 8.23 0.00 45.51 1.89
5763 6034 1.571919 CGTAATGGAAGAGAAGCCGG 58.428 55.000 0.00 0.00 0.00 6.13
5790 6061 7.926555 CAGTCTTTGTGTAAGAGGTAAGAAGAA 59.073 37.037 0.00 0.00 43.39 2.52
5791 6062 8.145122 AGTCTTTGTGTAAGAGGTAAGAAGAAG 58.855 37.037 0.00 0.00 43.39 2.85
5793 6064 8.871125 TCTTTGTGTAAGAGGTAAGAAGAAGAT 58.129 33.333 0.00 0.00 37.96 2.40
6127 6401 2.944129 TGAAAGGGCTTAGCTGTTGTT 58.056 42.857 3.59 0.00 0.00 2.83
6128 6402 2.622942 TGAAAGGGCTTAGCTGTTGTTG 59.377 45.455 3.59 0.00 0.00 3.33
6129 6403 2.364972 AAGGGCTTAGCTGTTGTTGT 57.635 45.000 3.59 0.00 0.00 3.32
6170 6444 1.217882 GGTTGTCGTCAGTGTCCTTG 58.782 55.000 0.00 0.00 0.00 3.61
6173 6447 2.676342 GTTGTCGTCAGTGTCCTTGTTT 59.324 45.455 0.00 0.00 0.00 2.83
6175 6449 2.675844 TGTCGTCAGTGTCCTTGTTTTG 59.324 45.455 0.00 0.00 0.00 2.44
6176 6450 2.031683 GTCGTCAGTGTCCTTGTTTTGG 59.968 50.000 0.00 0.00 0.00 3.28
6225 6503 4.543590 GGAGATCTCCTCTTGTGTTGAA 57.456 45.455 31.11 0.00 46.16 2.69
6226 6504 5.096443 GGAGATCTCCTCTTGTGTTGAAT 57.904 43.478 31.11 0.00 46.16 2.57
6227 6505 4.874966 GGAGATCTCCTCTTGTGTTGAATG 59.125 45.833 31.11 0.00 46.16 2.67
6228 6506 4.260170 AGATCTCCTCTTGTGTTGAATGC 58.740 43.478 0.00 0.00 0.00 3.56
6229 6507 2.783135 TCTCCTCTTGTGTTGAATGCC 58.217 47.619 0.00 0.00 0.00 4.40
6230 6508 2.106338 TCTCCTCTTGTGTTGAATGCCA 59.894 45.455 0.00 0.00 0.00 4.92
6231 6509 2.227388 CTCCTCTTGTGTTGAATGCCAC 59.773 50.000 0.00 0.00 0.00 5.01
6232 6510 1.069022 CCTCTTGTGTTGAATGCCACG 60.069 52.381 0.00 0.00 34.28 4.94
6233 6511 1.603802 CTCTTGTGTTGAATGCCACGT 59.396 47.619 0.00 0.00 34.28 4.49
6234 6512 1.601903 TCTTGTGTTGAATGCCACGTC 59.398 47.619 0.00 0.00 34.28 4.34
6235 6513 1.333308 CTTGTGTTGAATGCCACGTCA 59.667 47.619 0.00 0.00 34.28 4.35
6236 6514 0.660488 TGTGTTGAATGCCACGTCAC 59.340 50.000 0.00 0.00 34.28 3.67
6237 6515 0.944386 GTGTTGAATGCCACGTCACT 59.056 50.000 0.00 0.00 0.00 3.41
6238 6516 1.069906 GTGTTGAATGCCACGTCACTC 60.070 52.381 0.00 0.00 0.00 3.51
6239 6517 1.225855 GTTGAATGCCACGTCACTCA 58.774 50.000 0.00 0.00 0.00 3.41
6240 6518 1.195448 GTTGAATGCCACGTCACTCAG 59.805 52.381 0.00 0.00 0.00 3.35
6241 6519 0.678950 TGAATGCCACGTCACTCAGA 59.321 50.000 0.00 0.00 0.00 3.27
6242 6520 1.069978 TGAATGCCACGTCACTCAGAA 59.930 47.619 0.00 0.00 0.00 3.02
6243 6521 2.143122 GAATGCCACGTCACTCAGAAA 58.857 47.619 0.00 0.00 0.00 2.52
6244 6522 2.479566 ATGCCACGTCACTCAGAAAT 57.520 45.000 0.00 0.00 0.00 2.17
6245 6523 1.511850 TGCCACGTCACTCAGAAATG 58.488 50.000 0.00 0.00 0.00 2.32
6246 6524 0.166814 GCCACGTCACTCAGAAATGC 59.833 55.000 0.00 0.00 0.00 3.56
6247 6525 1.800805 CCACGTCACTCAGAAATGCT 58.199 50.000 0.00 0.00 0.00 3.79
6248 6526 1.728971 CCACGTCACTCAGAAATGCTC 59.271 52.381 0.00 0.00 0.00 4.26
6249 6527 2.611473 CCACGTCACTCAGAAATGCTCT 60.611 50.000 0.00 0.00 33.23 4.09
6250 6528 3.367395 CCACGTCACTCAGAAATGCTCTA 60.367 47.826 0.00 0.00 31.12 2.43
6251 6529 4.237724 CACGTCACTCAGAAATGCTCTAA 58.762 43.478 0.00 0.00 31.12 2.10
6252 6530 4.686091 CACGTCACTCAGAAATGCTCTAAA 59.314 41.667 0.00 0.00 31.12 1.85
6253 6531 4.686554 ACGTCACTCAGAAATGCTCTAAAC 59.313 41.667 0.00 0.00 31.12 2.01
6254 6532 4.686091 CGTCACTCAGAAATGCTCTAAACA 59.314 41.667 0.00 0.00 31.12 2.83
6255 6533 5.177511 CGTCACTCAGAAATGCTCTAAACAA 59.822 40.000 0.00 0.00 31.12 2.83
6256 6534 6.597614 GTCACTCAGAAATGCTCTAAACAAG 58.402 40.000 0.00 0.00 31.12 3.16
6257 6535 6.203723 GTCACTCAGAAATGCTCTAAACAAGT 59.796 38.462 0.00 0.00 31.12 3.16
6258 6536 7.385205 GTCACTCAGAAATGCTCTAAACAAGTA 59.615 37.037 0.00 0.00 31.12 2.24
6259 6537 7.385205 TCACTCAGAAATGCTCTAAACAAGTAC 59.615 37.037 0.00 0.00 31.12 2.73
6260 6538 7.386299 CACTCAGAAATGCTCTAAACAAGTACT 59.614 37.037 0.00 0.00 31.12 2.73
6261 6539 7.386299 ACTCAGAAATGCTCTAAACAAGTACTG 59.614 37.037 0.00 0.00 31.12 2.74
6262 6540 7.217200 TCAGAAATGCTCTAAACAAGTACTGT 58.783 34.615 0.00 0.00 34.00 3.55
6263 6541 7.171508 TCAGAAATGCTCTAAACAAGTACTGTG 59.828 37.037 0.00 0.00 33.23 3.66
6264 6542 5.613358 AATGCTCTAAACAAGTACTGTGC 57.387 39.130 0.00 0.00 38.67 4.57
6265 6543 4.336889 TGCTCTAAACAAGTACTGTGCT 57.663 40.909 0.00 0.00 38.67 4.40
6266 6544 5.462530 TGCTCTAAACAAGTACTGTGCTA 57.537 39.130 0.00 0.00 38.67 3.49
6267 6545 5.470368 TGCTCTAAACAAGTACTGTGCTAG 58.530 41.667 0.00 3.10 38.67 3.42
6268 6546 4.327627 GCTCTAAACAAGTACTGTGCTAGC 59.672 45.833 8.10 8.10 38.67 3.42
6269 6547 5.715070 CTCTAAACAAGTACTGTGCTAGCT 58.285 41.667 17.23 0.00 38.67 3.32
6270 6548 5.710984 TCTAAACAAGTACTGTGCTAGCTC 58.289 41.667 17.23 13.38 38.67 4.09
6271 6549 4.336889 AAACAAGTACTGTGCTAGCTCA 57.663 40.909 17.23 17.59 38.67 4.26
6272 6550 3.584406 ACAAGTACTGTGCTAGCTCAG 57.416 47.619 34.14 34.14 41.62 3.35
6273 6551 2.232452 ACAAGTACTGTGCTAGCTCAGG 59.768 50.000 36.73 25.61 40.59 3.86
6274 6552 2.493675 CAAGTACTGTGCTAGCTCAGGA 59.506 50.000 36.73 31.37 40.59 3.86
6275 6553 2.096248 AGTACTGTGCTAGCTCAGGAC 58.904 52.381 37.99 37.99 46.19 3.85
6280 6558 1.719600 GTGCTAGCTCAGGACAACTG 58.280 55.000 17.23 0.00 44.60 3.16
6287 6565 4.553828 AGCTCAGGACAACTGGTTAGCG 62.554 54.545 0.00 0.00 44.76 4.26
6288 6566 3.906660 CAGGACAACTGGTTAGCGA 57.093 52.632 0.00 0.00 43.70 4.93
6289 6567 2.386661 CAGGACAACTGGTTAGCGAT 57.613 50.000 0.00 0.00 43.70 4.58
6290 6568 2.002586 CAGGACAACTGGTTAGCGATG 58.997 52.381 0.00 0.00 43.70 3.84
6291 6569 0.727398 GGACAACTGGTTAGCGATGC 59.273 55.000 0.00 0.00 0.00 3.91
6292 6570 1.438651 GACAACTGGTTAGCGATGCA 58.561 50.000 0.00 0.00 0.00 3.96
6293 6571 1.804151 GACAACTGGTTAGCGATGCAA 59.196 47.619 0.00 0.00 0.00 4.08
6294 6572 2.225491 GACAACTGGTTAGCGATGCAAA 59.775 45.455 0.00 0.00 0.00 3.68
6295 6573 2.621055 ACAACTGGTTAGCGATGCAAAA 59.379 40.909 0.00 0.00 0.00 2.44
6296 6574 3.255642 ACAACTGGTTAGCGATGCAAAAT 59.744 39.130 0.00 0.00 0.00 1.82
6297 6575 3.764885 ACTGGTTAGCGATGCAAAATC 57.235 42.857 0.00 0.00 0.00 2.17
6298 6576 2.423538 ACTGGTTAGCGATGCAAAATCC 59.576 45.455 0.00 0.00 0.00 3.01
6299 6577 2.423185 CTGGTTAGCGATGCAAAATCCA 59.577 45.455 0.00 0.00 0.00 3.41
6300 6578 2.423185 TGGTTAGCGATGCAAAATCCAG 59.577 45.455 0.00 0.00 0.00 3.86
6301 6579 2.423538 GGTTAGCGATGCAAAATCCAGT 59.576 45.455 0.00 0.00 0.00 4.00
6302 6580 3.429085 GTTAGCGATGCAAAATCCAGTG 58.571 45.455 0.00 0.00 0.00 3.66
6303 6581 1.538047 AGCGATGCAAAATCCAGTGT 58.462 45.000 0.00 0.00 0.00 3.55
6304 6582 1.200716 AGCGATGCAAAATCCAGTGTG 59.799 47.619 0.00 0.00 0.00 3.82
6305 6583 1.068333 GCGATGCAAAATCCAGTGTGT 60.068 47.619 0.00 0.00 0.00 3.72
6306 6584 2.607771 GCGATGCAAAATCCAGTGTGTT 60.608 45.455 0.00 0.00 0.00 3.32
6307 6585 3.236816 CGATGCAAAATCCAGTGTGTTC 58.763 45.455 0.00 0.00 0.00 3.18
6308 6586 3.058016 CGATGCAAAATCCAGTGTGTTCT 60.058 43.478 0.00 0.00 0.00 3.01
6309 6587 3.988379 TGCAAAATCCAGTGTGTTCTC 57.012 42.857 0.00 0.00 0.00 2.87
6310 6588 2.622942 TGCAAAATCCAGTGTGTTCTCC 59.377 45.455 0.00 0.00 0.00 3.71
6311 6589 2.622942 GCAAAATCCAGTGTGTTCTCCA 59.377 45.455 0.00 0.00 0.00 3.86
6312 6590 3.304928 GCAAAATCCAGTGTGTTCTCCAG 60.305 47.826 0.00 0.00 0.00 3.86
6313 6591 3.864789 AAATCCAGTGTGTTCTCCAGT 57.135 42.857 0.00 0.00 0.00 4.00
6314 6592 3.409026 AATCCAGTGTGTTCTCCAGTC 57.591 47.619 0.00 0.00 0.00 3.51
6315 6593 1.048601 TCCAGTGTGTTCTCCAGTCC 58.951 55.000 0.00 0.00 0.00 3.85
6316 6594 0.035458 CCAGTGTGTTCTCCAGTCCC 59.965 60.000 0.00 0.00 0.00 4.46
6317 6595 0.758734 CAGTGTGTTCTCCAGTCCCA 59.241 55.000 0.00 0.00 0.00 4.37
6318 6596 1.140852 CAGTGTGTTCTCCAGTCCCAA 59.859 52.381 0.00 0.00 0.00 4.12
6319 6597 2.057922 AGTGTGTTCTCCAGTCCCAAT 58.942 47.619 0.00 0.00 0.00 3.16
6320 6598 3.007940 CAGTGTGTTCTCCAGTCCCAATA 59.992 47.826 0.00 0.00 0.00 1.90
6321 6599 3.008049 AGTGTGTTCTCCAGTCCCAATAC 59.992 47.826 0.00 0.00 0.00 1.89
6322 6600 3.008049 GTGTGTTCTCCAGTCCCAATACT 59.992 47.826 0.00 0.00 0.00 2.12
6323 6601 3.650942 TGTGTTCTCCAGTCCCAATACTT 59.349 43.478 0.00 0.00 0.00 2.24
6324 6602 4.254492 GTGTTCTCCAGTCCCAATACTTC 58.746 47.826 0.00 0.00 0.00 3.01
6325 6603 3.907474 TGTTCTCCAGTCCCAATACTTCA 59.093 43.478 0.00 0.00 0.00 3.02
6326 6604 4.020218 TGTTCTCCAGTCCCAATACTTCAG 60.020 45.833 0.00 0.00 0.00 3.02
6327 6605 3.791320 TCTCCAGTCCCAATACTTCAGT 58.209 45.455 0.00 0.00 0.00 3.41
6328 6606 3.515502 TCTCCAGTCCCAATACTTCAGTG 59.484 47.826 0.00 0.00 0.00 3.66
6329 6607 2.571653 TCCAGTCCCAATACTTCAGTGG 59.428 50.000 0.00 0.00 42.28 4.00
6330 6608 2.571653 CCAGTCCCAATACTTCAGTGGA 59.428 50.000 0.00 0.00 45.65 4.02
6331 6609 3.009033 CCAGTCCCAATACTTCAGTGGAA 59.991 47.826 0.00 0.00 45.65 3.53
6339 6617 2.157421 CTTCAGTGGAAGTGCGAGC 58.843 57.895 0.00 0.00 44.48 5.03
6340 6618 0.601046 CTTCAGTGGAAGTGCGAGCA 60.601 55.000 0.00 0.00 44.48 4.26
6341 6619 0.601046 TTCAGTGGAAGTGCGAGCAG 60.601 55.000 0.00 0.00 37.14 4.24
6342 6620 1.005748 CAGTGGAAGTGCGAGCAGA 60.006 57.895 0.00 0.00 0.00 4.26
6343 6621 0.390866 CAGTGGAAGTGCGAGCAGAT 60.391 55.000 0.00 0.00 0.00 2.90
6344 6622 1.134995 CAGTGGAAGTGCGAGCAGATA 60.135 52.381 0.00 0.00 0.00 1.98
6345 6623 1.759445 AGTGGAAGTGCGAGCAGATAT 59.241 47.619 0.00 0.00 0.00 1.63
6346 6624 2.131183 GTGGAAGTGCGAGCAGATATC 58.869 52.381 0.00 0.00 0.00 1.63
6347 6625 2.034878 TGGAAGTGCGAGCAGATATCT 58.965 47.619 0.00 0.00 0.00 1.98
6348 6626 2.223900 TGGAAGTGCGAGCAGATATCTG 60.224 50.000 25.64 25.64 46.40 2.90
6349 6627 2.223923 GGAAGTGCGAGCAGATATCTGT 60.224 50.000 28.92 17.99 45.45 3.41
6350 6628 3.452474 GAAGTGCGAGCAGATATCTGTT 58.548 45.455 28.92 25.09 45.45 3.16
6351 6629 3.090952 AGTGCGAGCAGATATCTGTTC 57.909 47.619 29.76 29.76 46.47 3.18
6370 6648 9.725019 ATCTGTTCACAACTTAATATTGTCTCA 57.275 29.630 0.00 3.24 38.22 3.27
6371 6649 9.208022 TCTGTTCACAACTTAATATTGTCTCAG 57.792 33.333 0.00 10.05 38.22 3.35
6372 6650 9.208022 CTGTTCACAACTTAATATTGTCTCAGA 57.792 33.333 0.00 5.33 38.22 3.27
6373 6651 9.208022 TGTTCACAACTTAATATTGTCTCAGAG 57.792 33.333 0.00 0.00 38.22 3.35
6374 6652 8.660373 GTTCACAACTTAATATTGTCTCAGAGG 58.340 37.037 0.00 0.00 38.22 3.69
6375 6653 6.818644 TCACAACTTAATATTGTCTCAGAGGC 59.181 38.462 0.00 0.00 38.22 4.70
6376 6654 6.595326 CACAACTTAATATTGTCTCAGAGGCA 59.405 38.462 0.00 0.00 38.22 4.75
6377 6655 7.119699 CACAACTTAATATTGTCTCAGAGGCAA 59.880 37.037 19.76 19.76 44.70 4.52
6383 6661 2.099141 TGTCTCAGAGGCAATTTCGG 57.901 50.000 0.91 0.00 0.00 4.30
6384 6662 1.623311 TGTCTCAGAGGCAATTTCGGA 59.377 47.619 0.91 0.00 0.00 4.55
6385 6663 2.237143 TGTCTCAGAGGCAATTTCGGAT 59.763 45.455 0.91 0.00 0.00 4.18
6386 6664 3.450817 TGTCTCAGAGGCAATTTCGGATA 59.549 43.478 0.91 0.00 0.00 2.59
6387 6665 4.081142 TGTCTCAGAGGCAATTTCGGATAA 60.081 41.667 0.91 0.00 0.00 1.75
6388 6666 4.509600 GTCTCAGAGGCAATTTCGGATAAG 59.490 45.833 0.00 0.00 0.00 1.73
6389 6667 4.162320 TCTCAGAGGCAATTTCGGATAAGT 59.838 41.667 0.00 0.00 0.00 2.24
6390 6668 5.362717 TCTCAGAGGCAATTTCGGATAAGTA 59.637 40.000 0.00 0.00 0.00 2.24
6391 6669 5.357257 TCAGAGGCAATTTCGGATAAGTAC 58.643 41.667 0.00 0.00 0.00 2.73
6392 6670 5.128827 TCAGAGGCAATTTCGGATAAGTACT 59.871 40.000 0.00 0.00 0.00 2.73
6393 6671 5.817816 CAGAGGCAATTTCGGATAAGTACTT 59.182 40.000 13.68 13.68 0.00 2.24
6394 6672 5.817816 AGAGGCAATTTCGGATAAGTACTTG 59.182 40.000 18.56 1.24 0.00 3.16
6395 6673 4.881850 AGGCAATTTCGGATAAGTACTTGG 59.118 41.667 18.56 5.09 0.00 3.61
6396 6674 4.036380 GGCAATTTCGGATAAGTACTTGGG 59.964 45.833 18.56 4.75 0.00 4.12
6397 6675 4.036380 GCAATTTCGGATAAGTACTTGGGG 59.964 45.833 18.56 5.09 0.00 4.96
6398 6676 5.190677 CAATTTCGGATAAGTACTTGGGGT 58.809 41.667 18.56 1.59 0.00 4.95
6399 6677 4.914177 TTTCGGATAAGTACTTGGGGTT 57.086 40.909 18.56 0.00 0.00 4.11
6400 6678 6.564557 ATTTCGGATAAGTACTTGGGGTTA 57.435 37.500 18.56 0.00 0.00 2.85
6401 6679 5.343307 TTCGGATAAGTACTTGGGGTTAC 57.657 43.478 18.56 1.08 0.00 2.50
6402 6680 3.706086 TCGGATAAGTACTTGGGGTTACC 59.294 47.826 18.56 9.18 40.81 2.85
6403 6681 3.491447 CGGATAAGTACTTGGGGTTACCG 60.491 52.174 18.56 15.75 44.64 4.02
6404 6682 3.452264 GGATAAGTACTTGGGGTTACCGT 59.548 47.826 18.56 0.00 44.64 4.83
6405 6683 4.442052 GGATAAGTACTTGGGGTTACCGTC 60.442 50.000 18.56 1.41 44.64 4.79
6406 6684 2.014010 AGTACTTGGGGTTACCGTCA 57.986 50.000 0.00 0.00 44.64 4.35
6407 6685 2.328319 AGTACTTGGGGTTACCGTCAA 58.672 47.619 8.14 8.14 44.64 3.18
6408 6686 2.705127 AGTACTTGGGGTTACCGTCAAA 59.295 45.455 9.35 0.00 44.64 2.69
6409 6687 2.732844 ACTTGGGGTTACCGTCAAAA 57.267 45.000 9.35 0.00 44.64 2.44
6410 6688 2.578786 ACTTGGGGTTACCGTCAAAAG 58.421 47.619 9.35 5.00 44.64 2.27
6411 6689 2.092267 ACTTGGGGTTACCGTCAAAAGT 60.092 45.455 9.35 5.50 44.64 2.66
6412 6690 2.732844 TGGGGTTACCGTCAAAAGTT 57.267 45.000 0.00 0.00 44.64 2.66
6413 6691 2.299521 TGGGGTTACCGTCAAAAGTTG 58.700 47.619 0.00 0.00 44.64 3.16
6414 6692 1.610038 GGGGTTACCGTCAAAAGTTGG 59.390 52.381 0.00 0.00 37.78 3.77
6415 6693 2.574450 GGGTTACCGTCAAAAGTTGGA 58.426 47.619 0.00 0.00 0.00 3.53
6416 6694 2.950975 GGGTTACCGTCAAAAGTTGGAA 59.049 45.455 0.00 0.00 0.00 3.53
6417 6695 3.570975 GGGTTACCGTCAAAAGTTGGAAT 59.429 43.478 0.00 0.00 0.00 3.01
6418 6696 4.038282 GGGTTACCGTCAAAAGTTGGAATT 59.962 41.667 0.00 0.00 0.00 2.17
6419 6697 4.979815 GGTTACCGTCAAAAGTTGGAATTG 59.020 41.667 0.00 0.00 0.00 2.32
6420 6698 5.221087 GGTTACCGTCAAAAGTTGGAATTGA 60.221 40.000 0.00 0.00 0.00 2.57
6421 6699 4.301637 ACCGTCAAAAGTTGGAATTGAC 57.698 40.909 7.73 7.73 45.87 3.18
6422 6700 3.067601 ACCGTCAAAAGTTGGAATTGACC 59.932 43.478 10.95 0.00 46.35 4.02
6423 6701 3.296628 CGTCAAAAGTTGGAATTGACCG 58.703 45.455 10.95 4.89 46.35 4.79
6424 6702 3.002862 CGTCAAAAGTTGGAATTGACCGA 59.997 43.478 10.95 0.00 46.35 4.69
6425 6703 4.496673 CGTCAAAAGTTGGAATTGACCGAA 60.497 41.667 10.95 0.00 46.35 4.30
6426 6704 5.344884 GTCAAAAGTTGGAATTGACCGAAA 58.655 37.500 6.83 0.00 44.42 3.46
6427 6705 5.983118 GTCAAAAGTTGGAATTGACCGAAAT 59.017 36.000 6.83 0.00 44.42 2.17
6428 6706 5.982516 TCAAAAGTTGGAATTGACCGAAATG 59.017 36.000 0.00 0.00 0.00 2.32
6429 6707 5.782893 AAAGTTGGAATTGACCGAAATGA 57.217 34.783 0.00 0.00 0.00 2.57
6430 6708 4.766404 AGTTGGAATTGACCGAAATGAC 57.234 40.909 0.00 0.00 0.00 3.06
6431 6709 4.141287 AGTTGGAATTGACCGAAATGACA 58.859 39.130 0.00 0.00 0.00 3.58
6432 6710 4.216257 AGTTGGAATTGACCGAAATGACAG 59.784 41.667 0.00 0.00 0.00 3.51
6433 6711 3.750371 TGGAATTGACCGAAATGACAGT 58.250 40.909 0.00 0.00 0.00 3.55
6434 6712 4.141287 TGGAATTGACCGAAATGACAGTT 58.859 39.130 0.00 0.00 0.00 3.16
6435 6713 4.582656 TGGAATTGACCGAAATGACAGTTT 59.417 37.500 0.00 0.00 0.00 2.66
6436 6714 5.068460 TGGAATTGACCGAAATGACAGTTTT 59.932 36.000 0.00 0.00 0.00 2.43
6437 6715 5.629435 GGAATTGACCGAAATGACAGTTTTC 59.371 40.000 0.00 0.00 0.00 2.29
6438 6716 5.766150 ATTGACCGAAATGACAGTTTTCA 57.234 34.783 3.19 0.00 33.61 2.69
6439 6717 5.568685 TTGACCGAAATGACAGTTTTCAA 57.431 34.783 3.19 4.12 33.61 2.69
6440 6718 4.915704 TGACCGAAATGACAGTTTTCAAC 58.084 39.130 3.19 0.00 33.61 3.18
6441 6719 4.396478 TGACCGAAATGACAGTTTTCAACA 59.604 37.500 3.19 0.00 33.61 3.33
6442 6720 5.067153 TGACCGAAATGACAGTTTTCAACAT 59.933 36.000 3.19 0.00 33.61 2.71
6443 6721 5.519722 ACCGAAATGACAGTTTTCAACATC 58.480 37.500 3.19 0.00 33.61 3.06
6444 6722 5.299279 ACCGAAATGACAGTTTTCAACATCT 59.701 36.000 3.19 0.00 33.61 2.90
6445 6723 6.485313 ACCGAAATGACAGTTTTCAACATCTA 59.515 34.615 3.19 0.00 33.61 1.98
6446 6724 7.017645 CCGAAATGACAGTTTTCAACATCTAG 58.982 38.462 3.19 0.00 33.61 2.43
6447 6725 7.307989 CCGAAATGACAGTTTTCAACATCTAGT 60.308 37.037 3.19 0.00 33.61 2.57
6448 6726 8.070171 CGAAATGACAGTTTTCAACATCTAGTT 58.930 33.333 3.19 0.00 42.42 2.24
6463 6741 7.744087 ACATCTAGTTGATAAAGTTTGTGCA 57.256 32.000 7.81 0.00 33.36 4.57
6464 6742 7.584987 ACATCTAGTTGATAAAGTTTGTGCAC 58.415 34.615 10.75 10.75 33.36 4.57
6465 6743 7.445402 ACATCTAGTTGATAAAGTTTGTGCACT 59.555 33.333 19.41 0.00 33.36 4.40
6466 6744 7.801716 TCTAGTTGATAAAGTTTGTGCACTT 57.198 32.000 19.41 5.94 38.74 3.16
6467 6745 8.896320 TCTAGTTGATAAAGTTTGTGCACTTA 57.104 30.769 19.41 8.16 35.87 2.24
6468 6746 9.502091 TCTAGTTGATAAAGTTTGTGCACTTAT 57.498 29.630 19.41 12.74 35.87 1.73
6474 6752 9.853555 TGATAAAGTTTGTGCACTTATTAATGG 57.146 29.630 19.41 0.00 35.87 3.16
6475 6753 9.301153 GATAAAGTTTGTGCACTTATTAATGGG 57.699 33.333 19.41 0.00 35.87 4.00
6476 6754 6.664428 AAGTTTGTGCACTTATTAATGGGT 57.336 33.333 19.41 0.00 35.10 4.51
6477 6755 6.024552 AGTTTGTGCACTTATTAATGGGTG 57.975 37.500 19.41 14.35 0.00 4.61
6478 6756 5.047377 AGTTTGTGCACTTATTAATGGGTGG 60.047 40.000 19.41 6.37 0.00 4.61
6479 6757 4.308526 TGTGCACTTATTAATGGGTGGA 57.691 40.909 19.41 14.60 0.00 4.02
6480 6758 4.865905 TGTGCACTTATTAATGGGTGGAT 58.134 39.130 19.41 0.00 33.16 3.41
6481 6759 4.887071 TGTGCACTTATTAATGGGTGGATC 59.113 41.667 19.41 12.66 33.16 3.36
6482 6760 5.133221 GTGCACTTATTAATGGGTGGATCT 58.867 41.667 10.32 0.00 33.16 2.75
6483 6761 5.239525 GTGCACTTATTAATGGGTGGATCTC 59.760 44.000 10.32 6.29 33.16 2.75
6484 6762 5.104151 TGCACTTATTAATGGGTGGATCTCA 60.104 40.000 17.94 8.88 0.00 3.27
6485 6763 5.827797 GCACTTATTAATGGGTGGATCTCAA 59.172 40.000 17.94 0.00 0.00 3.02
6486 6764 6.321181 GCACTTATTAATGGGTGGATCTCAAA 59.679 38.462 17.94 0.00 0.00 2.69
6487 6765 7.147915 GCACTTATTAATGGGTGGATCTCAAAA 60.148 37.037 17.94 0.00 0.00 2.44
6488 6766 8.748412 CACTTATTAATGGGTGGATCTCAAAAA 58.252 33.333 12.09 0.00 0.00 1.94
6489 6767 9.492730 ACTTATTAATGGGTGGATCTCAAAAAT 57.507 29.630 0.00 0.00 0.00 1.82
6490 6768 9.754382 CTTATTAATGGGTGGATCTCAAAAATG 57.246 33.333 0.00 0.00 0.00 2.32
6491 6769 7.738437 ATTAATGGGTGGATCTCAAAAATGT 57.262 32.000 0.00 0.00 0.00 2.71
6492 6770 7.552050 TTAATGGGTGGATCTCAAAAATGTT 57.448 32.000 0.00 0.00 0.00 2.71
6493 6771 8.657387 TTAATGGGTGGATCTCAAAAATGTTA 57.343 30.769 0.00 0.00 0.00 2.41
6494 6772 7.738437 AATGGGTGGATCTCAAAAATGTTAT 57.262 32.000 0.00 0.00 0.00 1.89
6495 6773 6.773976 TGGGTGGATCTCAAAAATGTTATC 57.226 37.500 0.00 0.00 0.00 1.75
6496 6774 6.252233 TGGGTGGATCTCAAAAATGTTATCA 58.748 36.000 0.00 0.00 0.00 2.15
6497 6775 6.723515 TGGGTGGATCTCAAAAATGTTATCAA 59.276 34.615 0.00 0.00 0.00 2.57
6498 6776 7.399765 TGGGTGGATCTCAAAAATGTTATCAAT 59.600 33.333 0.00 0.00 0.00 2.57
6499 6777 7.922811 GGGTGGATCTCAAAAATGTTATCAATC 59.077 37.037 0.00 0.00 0.00 2.67
6500 6778 8.469200 GGTGGATCTCAAAAATGTTATCAATCA 58.531 33.333 0.00 0.00 0.00 2.57
6501 6779 9.512435 GTGGATCTCAAAAATGTTATCAATCAG 57.488 33.333 0.00 0.00 0.00 2.90
6502 6780 8.192774 TGGATCTCAAAAATGTTATCAATCAGC 58.807 33.333 0.00 0.00 0.00 4.26
6503 6781 7.377928 GGATCTCAAAAATGTTATCAATCAGCG 59.622 37.037 0.00 0.00 0.00 5.18
6504 6782 6.554419 TCTCAAAAATGTTATCAATCAGCGG 58.446 36.000 0.00 0.00 0.00 5.52
6505 6783 5.649557 TCAAAAATGTTATCAATCAGCGGG 58.350 37.500 0.00 0.00 0.00 6.13
6506 6784 5.417266 TCAAAAATGTTATCAATCAGCGGGA 59.583 36.000 0.00 0.00 0.00 5.14
6507 6785 5.913137 AAAATGTTATCAATCAGCGGGAA 57.087 34.783 0.00 0.00 0.00 3.97
6508 6786 5.913137 AAATGTTATCAATCAGCGGGAAA 57.087 34.783 0.00 0.00 0.00 3.13
6509 6787 5.505173 AATGTTATCAATCAGCGGGAAAG 57.495 39.130 0.00 0.00 0.00 2.62
6510 6788 4.214986 TGTTATCAATCAGCGGGAAAGA 57.785 40.909 0.00 0.00 0.00 2.52
6511 6789 4.584874 TGTTATCAATCAGCGGGAAAGAA 58.415 39.130 0.00 0.00 0.00 2.52
6512 6790 5.007034 TGTTATCAATCAGCGGGAAAGAAA 58.993 37.500 0.00 0.00 0.00 2.52
6513 6791 5.106317 TGTTATCAATCAGCGGGAAAGAAAC 60.106 40.000 0.00 0.00 0.00 2.78
6514 6792 3.140325 TCAATCAGCGGGAAAGAAACT 57.860 42.857 0.00 0.00 0.00 2.66
6515 6793 3.074412 TCAATCAGCGGGAAAGAAACTC 58.926 45.455 0.00 0.00 0.00 3.01
6516 6794 3.077359 CAATCAGCGGGAAAGAAACTCT 58.923 45.455 0.00 0.00 0.00 3.24
6517 6795 2.930826 TCAGCGGGAAAGAAACTCTT 57.069 45.000 0.00 0.00 38.59 2.85
6519 6797 3.551846 TCAGCGGGAAAGAAACTCTTTT 58.448 40.909 3.31 0.00 45.85 2.27
6520 6798 3.315191 TCAGCGGGAAAGAAACTCTTTTG 59.685 43.478 3.31 0.00 45.85 2.44
6521 6799 3.315191 CAGCGGGAAAGAAACTCTTTTGA 59.685 43.478 3.31 0.00 45.85 2.69
6522 6800 3.951680 AGCGGGAAAGAAACTCTTTTGAA 59.048 39.130 3.31 0.00 45.85 2.69
6523 6801 4.036852 AGCGGGAAAGAAACTCTTTTGAAG 59.963 41.667 3.31 0.00 45.85 3.02
6524 6802 4.793028 GCGGGAAAGAAACTCTTTTGAAGG 60.793 45.833 3.31 0.00 45.85 3.46
6525 6803 4.621991 GGGAAAGAAACTCTTTTGAAGGC 58.378 43.478 3.31 0.00 45.85 4.35
6526 6804 4.290969 GGAAAGAAACTCTTTTGAAGGCG 58.709 43.478 3.31 0.00 45.85 5.52
6527 6805 3.990318 AAGAAACTCTTTTGAAGGCGG 57.010 42.857 0.00 0.00 31.57 6.13
6528 6806 2.932261 AGAAACTCTTTTGAAGGCGGT 58.068 42.857 0.00 0.00 0.00 5.68
6529 6807 2.618709 AGAAACTCTTTTGAAGGCGGTG 59.381 45.455 0.00 0.00 0.00 4.94
6530 6808 1.318576 AACTCTTTTGAAGGCGGTGG 58.681 50.000 0.00 0.00 0.00 4.61
6531 6809 1.172812 ACTCTTTTGAAGGCGGTGGC 61.173 55.000 0.00 0.00 38.90 5.01
6532 6810 1.152860 TCTTTTGAAGGCGGTGGCA 60.153 52.632 0.00 0.00 42.47 4.92
6533 6811 1.007387 CTTTTGAAGGCGGTGGCAC 60.007 57.895 9.70 9.70 42.47 5.01
6534 6812 1.733402 CTTTTGAAGGCGGTGGCACA 61.733 55.000 20.82 0.00 42.47 4.57
6535 6813 1.733402 TTTTGAAGGCGGTGGCACAG 61.733 55.000 20.82 17.20 41.80 3.66
6536 6814 4.641645 TGAAGGCGGTGGCACAGG 62.642 66.667 20.82 11.69 41.80 4.00
6540 6818 4.489771 GGCGGTGGCACAGGCTAT 62.490 66.667 31.08 0.00 41.80 2.97
6541 6819 2.897350 GCGGTGGCACAGGCTATC 60.897 66.667 20.82 0.00 41.80 2.08
6542 6820 2.203070 CGGTGGCACAGGCTATCC 60.203 66.667 20.82 0.00 41.80 2.59
6543 6821 2.193248 GGTGGCACAGGCTATCCC 59.807 66.667 20.82 0.00 41.80 3.85
6544 6822 2.203070 GTGGCACAGGCTATCCCG 60.203 66.667 13.86 0.00 41.80 5.14
6545 6823 3.479203 TGGCACAGGCTATCCCGG 61.479 66.667 0.00 0.00 40.87 5.73
6546 6824 3.480133 GGCACAGGCTATCCCGGT 61.480 66.667 0.00 0.00 43.22 5.28
6547 6825 2.590092 GCACAGGCTATCCCGGTT 59.410 61.111 0.00 0.00 40.25 4.44
6548 6826 1.077716 GCACAGGCTATCCCGGTTT 60.078 57.895 0.00 0.00 40.25 3.27
6549 6827 0.179468 GCACAGGCTATCCCGGTTTA 59.821 55.000 0.00 0.00 40.25 2.01
6550 6828 1.202770 GCACAGGCTATCCCGGTTTAT 60.203 52.381 0.00 0.00 40.25 1.40
6551 6829 2.494059 CACAGGCTATCCCGGTTTATG 58.506 52.381 0.00 0.00 40.25 1.90
6552 6830 1.202770 ACAGGCTATCCCGGTTTATGC 60.203 52.381 0.00 0.00 39.07 3.14
6553 6831 0.400594 AGGCTATCCCGGTTTATGCC 59.599 55.000 12.78 12.78 39.21 4.40
6554 6832 0.109723 GGCTATCCCGGTTTATGCCA 59.890 55.000 14.92 0.00 38.79 4.92
6555 6833 1.271926 GGCTATCCCGGTTTATGCCAT 60.272 52.381 14.92 0.00 38.79 4.40
6556 6834 1.812571 GCTATCCCGGTTTATGCCATG 59.187 52.381 0.00 0.00 0.00 3.66
6557 6835 2.814097 GCTATCCCGGTTTATGCCATGT 60.814 50.000 0.00 0.00 0.00 3.21
6558 6836 1.981256 ATCCCGGTTTATGCCATGTC 58.019 50.000 0.00 0.00 0.00 3.06
6559 6837 0.462937 TCCCGGTTTATGCCATGTCG 60.463 55.000 0.00 0.00 0.00 4.35
6560 6838 1.444119 CCCGGTTTATGCCATGTCGG 61.444 60.000 0.00 0.00 36.23 4.79
6561 6839 0.746563 CCGGTTTATGCCATGTCGGT 60.747 55.000 0.00 0.00 36.97 4.69
6562 6840 1.091537 CGGTTTATGCCATGTCGGTT 58.908 50.000 0.00 0.00 36.97 4.44
6563 6841 1.470890 CGGTTTATGCCATGTCGGTTT 59.529 47.619 0.00 0.00 36.97 3.27
6564 6842 2.094957 CGGTTTATGCCATGTCGGTTTT 60.095 45.455 0.00 0.00 36.97 2.43
6565 6843 3.612955 CGGTTTATGCCATGTCGGTTTTT 60.613 43.478 0.00 0.00 36.97 1.94
6566 6844 4.379603 CGGTTTATGCCATGTCGGTTTTTA 60.380 41.667 0.00 0.00 36.97 1.52
6567 6845 5.471257 GGTTTATGCCATGTCGGTTTTTAA 58.529 37.500 0.00 0.00 36.97 1.52
6568 6846 5.346551 GGTTTATGCCATGTCGGTTTTTAAC 59.653 40.000 0.00 0.00 36.97 2.01
6569 6847 5.707242 TTATGCCATGTCGGTTTTTAACA 57.293 34.783 0.00 0.00 36.97 2.41
6570 6848 4.799564 ATGCCATGTCGGTTTTTAACAT 57.200 36.364 0.00 0.00 36.97 2.71
6571 6849 4.167554 TGCCATGTCGGTTTTTAACATC 57.832 40.909 0.00 0.00 36.97 3.06
6572 6850 3.057174 TGCCATGTCGGTTTTTAACATCC 60.057 43.478 0.00 0.00 36.97 3.51
6573 6851 3.674955 GCCATGTCGGTTTTTAACATCCC 60.675 47.826 0.00 0.00 36.97 3.85
6574 6852 3.426963 CCATGTCGGTTTTTAACATCCCG 60.427 47.826 0.00 0.00 39.98 5.14
6575 6853 3.123157 TGTCGGTTTTTAACATCCCGA 57.877 42.857 0.00 0.00 44.74 5.14
6578 6856 4.005487 TCGGTTTTTAACATCCCGAAGA 57.995 40.909 0.00 0.00 44.05 2.87
6579 6857 4.387598 TCGGTTTTTAACATCCCGAAGAA 58.612 39.130 0.00 0.00 44.05 2.52
6580 6858 5.005094 TCGGTTTTTAACATCCCGAAGAAT 58.995 37.500 0.00 0.00 44.05 2.40
6581 6859 6.171921 TCGGTTTTTAACATCCCGAAGAATA 58.828 36.000 0.00 0.00 44.05 1.75
6582 6860 6.824704 TCGGTTTTTAACATCCCGAAGAATAT 59.175 34.615 0.00 0.00 44.05 1.28
6583 6861 7.337436 TCGGTTTTTAACATCCCGAAGAATATT 59.663 33.333 0.00 0.00 44.05 1.28
6584 6862 7.971722 CGGTTTTTAACATCCCGAAGAATATTT 59.028 33.333 0.00 0.00 41.08 1.40
6585 6863 9.083080 GGTTTTTAACATCCCGAAGAATATTTG 57.917 33.333 0.00 0.00 0.00 2.32
6586 6864 9.634163 GTTTTTAACATCCCGAAGAATATTTGT 57.366 29.630 0.00 0.00 0.00 2.83
6590 6868 7.568199 AACATCCCGAAGAATATTTGTAAGG 57.432 36.000 0.00 0.00 0.00 2.69
6591 6869 5.531287 ACATCCCGAAGAATATTTGTAAGGC 59.469 40.000 0.00 0.00 0.00 4.35
6592 6870 5.367945 TCCCGAAGAATATTTGTAAGGCT 57.632 39.130 0.00 0.00 0.00 4.58
6593 6871 6.488769 TCCCGAAGAATATTTGTAAGGCTA 57.511 37.500 0.00 0.00 0.00 3.93
6594 6872 7.074653 TCCCGAAGAATATTTGTAAGGCTAT 57.925 36.000 0.00 0.00 0.00 2.97
6595 6873 7.159372 TCCCGAAGAATATTTGTAAGGCTATC 58.841 38.462 0.00 0.00 0.00 2.08
6596 6874 7.016268 TCCCGAAGAATATTTGTAAGGCTATCT 59.984 37.037 0.00 0.00 0.00 1.98
6597 6875 7.118390 CCCGAAGAATATTTGTAAGGCTATCTG 59.882 40.741 0.00 0.00 0.00 2.90
6598 6876 7.657761 CCGAAGAATATTTGTAAGGCTATCTGT 59.342 37.037 0.00 0.00 0.00 3.41
6599 6877 8.491152 CGAAGAATATTTGTAAGGCTATCTGTG 58.509 37.037 0.00 0.00 0.00 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 8.668510 TGATCCTGCTCTCAAATAGAAATAAC 57.331 34.615 0.00 0.00 32.46 1.89
14 15 9.857656 AATGATCCTGCTCTCAAATAGAAATAA 57.142 29.630 0.00 0.00 32.46 1.40
16 17 8.219178 AGAATGATCCTGCTCTCAAATAGAAAT 58.781 33.333 0.00 0.00 32.46 2.17
56 61 0.325671 TCTACTTGGAGCCTCAGGGG 60.326 60.000 0.00 0.00 38.36 4.79
57 62 1.415659 CATCTACTTGGAGCCTCAGGG 59.584 57.143 0.00 0.00 0.00 4.45
58 63 2.392662 TCATCTACTTGGAGCCTCAGG 58.607 52.381 0.00 0.00 0.00 3.86
59 64 3.803021 GCATCATCTACTTGGAGCCTCAG 60.803 52.174 0.00 0.00 0.00 3.35
60 65 2.103771 GCATCATCTACTTGGAGCCTCA 59.896 50.000 0.00 0.00 0.00 3.86
61 66 2.368221 AGCATCATCTACTTGGAGCCTC 59.632 50.000 0.00 0.00 0.00 4.70
62 67 2.104451 CAGCATCATCTACTTGGAGCCT 59.896 50.000 0.00 0.00 0.00 4.58
63 68 2.492012 CAGCATCATCTACTTGGAGCC 58.508 52.381 0.00 0.00 0.00 4.70
64 69 1.872313 GCAGCATCATCTACTTGGAGC 59.128 52.381 0.00 0.00 0.00 4.70
145 154 1.392589 CTTGTTTGCTGGTCACCACT 58.607 50.000 0.00 0.00 0.00 4.00
280 422 0.547712 TTTGGTGAGGGAGGAGGAGG 60.548 60.000 0.00 0.00 0.00 4.30
281 423 0.908198 CTTTGGTGAGGGAGGAGGAG 59.092 60.000 0.00 0.00 0.00 3.69
282 424 1.201429 GCTTTGGTGAGGGAGGAGGA 61.201 60.000 0.00 0.00 0.00 3.71
283 425 1.301293 GCTTTGGTGAGGGAGGAGG 59.699 63.158 0.00 0.00 0.00 4.30
284 426 0.322008 GTGCTTTGGTGAGGGAGGAG 60.322 60.000 0.00 0.00 0.00 3.69
285 427 1.059584 TGTGCTTTGGTGAGGGAGGA 61.060 55.000 0.00 0.00 0.00 3.71
361 503 3.005791 CCCCCTTTTCTTTTGTAGCTGTG 59.994 47.826 0.00 0.00 0.00 3.66
362 504 3.230976 CCCCCTTTTCTTTTGTAGCTGT 58.769 45.455 0.00 0.00 0.00 4.40
363 505 3.942130 CCCCCTTTTCTTTTGTAGCTG 57.058 47.619 0.00 0.00 0.00 4.24
384 526 5.774498 TTCCTTTTCAGCTCCTTCTTTTC 57.226 39.130 0.00 0.00 0.00 2.29
494 646 2.743131 AGGAAGGAAGGGGAGAAAGA 57.257 50.000 0.00 0.00 0.00 2.52
495 647 2.171659 GCTAGGAAGGAAGGGGAGAAAG 59.828 54.545 0.00 0.00 0.00 2.62
621 781 3.282021 GCAGGAGCAAGAACATATTCCA 58.718 45.455 0.00 0.00 41.58 3.53
671 831 1.692042 CAGGGTCCAGAGCAGGGAT 60.692 63.158 0.00 0.00 36.67 3.85
675 835 2.575993 CGACAGGGTCCAGAGCAG 59.424 66.667 0.00 0.00 0.00 4.24
677 837 4.803426 CGCGACAGGGTCCAGAGC 62.803 72.222 0.00 0.00 0.00 4.09
678 838 4.803426 GCGCGACAGGGTCCAGAG 62.803 72.222 12.10 0.00 0.00 3.35
680 840 4.803426 GAGCGCGACAGGGTCCAG 62.803 72.222 12.10 0.00 0.00 3.86
684 866 3.444805 GAGAGAGCGCGACAGGGT 61.445 66.667 12.10 0.00 0.00 4.34
730 914 4.069232 TCGCAGAGAACCCAGCCG 62.069 66.667 0.00 0.00 0.00 5.52
746 930 1.745264 CCGCCAGAATCCTCTCCTC 59.255 63.158 0.00 0.00 0.00 3.71
751 935 2.203126 CAGGCCGCCAGAATCCTC 60.203 66.667 13.15 0.00 0.00 3.71
773 957 0.394216 TTGGATCCCAATCACGGCAG 60.394 55.000 9.90 0.00 38.75 4.85
774 958 1.688211 TTGGATCCCAATCACGGCA 59.312 52.632 9.90 0.00 38.75 5.69
824 1008 1.074951 CCGCCAAGAAAGGAACCCT 59.925 57.895 0.00 0.00 33.87 4.34
825 1009 1.977009 CCCGCCAAGAAAGGAACCC 60.977 63.158 0.00 0.00 0.00 4.11
924 1116 2.925563 CAGAAATCGCCCAGAAAATTGC 59.074 45.455 0.00 0.00 0.00 3.56
925 1117 2.925563 GCAGAAATCGCCCAGAAAATTG 59.074 45.455 0.00 0.00 0.00 2.32
927 1119 1.133025 CGCAGAAATCGCCCAGAAAAT 59.867 47.619 0.00 0.00 0.00 1.82
928 1120 0.521291 CGCAGAAATCGCCCAGAAAA 59.479 50.000 0.00 0.00 0.00 2.29
929 1121 1.305219 CCGCAGAAATCGCCCAGAAA 61.305 55.000 0.00 0.00 0.00 2.52
939 1131 1.465689 CGACGCAAATTCCGCAGAAAT 60.466 47.619 1.28 0.00 35.09 2.17
1014 1206 2.511600 ATTCGCGAGGGCTTTCCG 60.512 61.111 9.59 0.00 41.52 4.30
1461 1670 2.118076 CCCTTCTTGGCCTTGGCA 59.882 61.111 14.04 0.00 35.98 4.92
1544 1758 3.148279 GAGGAGGGACGGCGTGAT 61.148 66.667 21.19 1.69 0.00 3.06
1552 1766 4.500826 GGGGAGGGGAGGAGGGAC 62.501 77.778 0.00 0.00 0.00 4.46
1632 1848 1.756375 GCAGCTGAACATAGACGGCG 61.756 60.000 20.43 4.80 42.40 6.46
1655 1871 7.955918 AGAAAAAGAAGTGGTAAAATGCAGAT 58.044 30.769 0.00 0.00 0.00 2.90
1694 1910 2.014335 TTCAGACGGACATGCTGATG 57.986 50.000 0.00 0.00 38.35 3.07
1833 2051 1.549203 TCCCAAAATCTCAAGCAGGC 58.451 50.000 0.00 0.00 0.00 4.85
1834 2052 4.676196 CGATTTCCCAAAATCTCAAGCAGG 60.676 45.833 8.70 0.00 45.72 4.85
1839 2057 4.644685 GGATCCGATTTCCCAAAATCTCAA 59.355 41.667 0.00 0.00 45.72 3.02
1851 2069 1.861575 GAGCTCAACGGATCCGATTTC 59.138 52.381 39.55 22.08 42.83 2.17
1865 2083 2.385013 ACATATGCAACACGAGCTCA 57.615 45.000 15.40 0.00 0.00 4.26
1885 2103 7.304919 CGAATACGTAGCTGATAGGATTAGA 57.695 40.000 0.08 0.00 34.56 2.10
1985 2212 2.647158 AAGGGCGAGGTCGTTCTCC 61.647 63.158 0.69 0.00 42.22 3.71
1986 2213 1.446272 CAAGGGCGAGGTCGTTCTC 60.446 63.158 0.69 0.00 42.22 2.87
1987 2214 2.657237 CAAGGGCGAGGTCGTTCT 59.343 61.111 0.69 0.00 42.22 3.01
1988 2215 3.119096 GCAAGGGCGAGGTCGTTC 61.119 66.667 0.69 0.00 42.22 3.95
2031 2258 4.260355 CATGAATGCCTGCCGCGG 62.260 66.667 24.05 24.05 42.08 6.46
2065 2292 2.301296 CCACATCCGGATAGATGAGCTT 59.699 50.000 18.63 0.00 45.43 3.74
2079 2306 1.379044 CAGGGGCTTGTCCACATCC 60.379 63.158 0.00 0.00 42.23 3.51
2082 2309 2.515398 CACAGGGGCTTGTCCACA 59.485 61.111 0.00 0.00 42.23 4.17
2109 2336 3.025978 CACCATGGCCATGATGTTAAGT 58.974 45.455 41.32 26.95 41.20 2.24
2123 2350 0.971959 CCACCACCAATCCACCATGG 60.972 60.000 11.19 11.19 42.60 3.66
2185 2412 7.491048 GGTGAGCAAAGAAGATAAGAAGAGTAG 59.509 40.741 0.00 0.00 0.00 2.57
2205 2436 2.362120 ATGCCAGGCAAGGTGAGC 60.362 61.111 20.84 0.00 43.62 4.26
2389 2633 2.019249 CATGCATGTACAACAGGGAGG 58.981 52.381 18.91 0.00 32.99 4.30
2392 2636 0.457035 GCCATGCATGTACAACAGGG 59.543 55.000 24.58 22.01 38.27 4.45
2498 2743 6.127479 TGAGCTCATCTTCTCTAGAAAGAACC 60.127 42.308 13.74 8.75 36.22 3.62
2499 2744 6.751888 GTGAGCTCATCTTCTCTAGAAAGAAC 59.248 42.308 21.47 0.00 36.22 3.01
2715 2963 2.084546 CCAGCTACTGTTTAGCCCAAC 58.915 52.381 0.00 0.00 41.25 3.77
2757 3005 8.155821 TCGAAACACAAATTATGACACCTTTA 57.844 30.769 0.00 0.00 0.00 1.85
2887 3135 2.398498 AGTCGATGCGATGAACATAGC 58.602 47.619 11.73 11.73 38.42 2.97
2900 3148 4.253685 ACAGGGTCATAACAAAGTCGATG 58.746 43.478 0.00 0.00 0.00 3.84
3066 3318 3.254060 CACGTCATTTGGTGAGACTAGG 58.746 50.000 0.00 0.00 37.56 3.02
3376 3631 5.293569 AGTTACAGTAAGCGCCATTTGATAC 59.706 40.000 2.29 2.77 0.00 2.24
3477 3732 3.965379 TTGCGAACACTGGTAGGATTA 57.035 42.857 0.00 0.00 0.00 1.75
3539 3794 7.041916 CCTCTGCAAAACAAGAGATGAGATATC 60.042 40.741 0.00 0.00 0.00 1.63
3546 3801 3.057736 CCACCTCTGCAAAACAAGAGATG 60.058 47.826 1.29 0.00 0.00 2.90
3675 3930 4.739195 TGCTAACTGTGTGAAAACAAACC 58.261 39.130 0.00 0.00 0.00 3.27
3761 4016 8.621286 ACCAACAATCGAAGAAAATATGGTATC 58.379 33.333 0.00 0.00 43.58 2.24
3798 4053 7.119846 ACTGAACAGAAGTGCTTTGGATAATAC 59.880 37.037 8.87 0.00 0.00 1.89
3866 4121 5.535753 AATTCTGGGAAAAGGAAACACAG 57.464 39.130 0.00 0.00 36.53 3.66
4245 4500 2.893489 GGCCTCATCAAAACTTGGTTCT 59.107 45.455 0.00 0.00 0.00 3.01
4287 4542 5.753438 CCTTTTTACAAAGTCTTTGGCTTCC 59.247 40.000 25.38 0.00 44.81 3.46
4359 4614 8.947115 ACTGCCAAACAAATATAGTTCTTACTC 58.053 33.333 0.00 0.00 35.78 2.59
4399 4654 6.899892 AAGAATAGTCTTCCAAAGGAGGAT 57.100 37.500 0.00 0.00 40.18 3.24
4419 4676 5.353400 CAGTTAAGCATCATTCTGCAGAAGA 59.647 40.000 31.14 26.19 44.77 2.87
4422 4679 4.582869 ACAGTTAAGCATCATTCTGCAGA 58.417 39.130 13.74 13.74 44.77 4.26
4561 4818 0.795085 CTCAAAGCAGACTTCCGCAG 59.205 55.000 0.00 0.00 34.05 5.18
4647 4910 8.736244 GCTGGTAAGAAAATAAACTGTGGATTA 58.264 33.333 0.00 0.00 0.00 1.75
4733 4997 8.659925 AACATTCAACATGTAGCAATTTCAAA 57.340 26.923 0.00 0.00 0.00 2.69
4782 5046 7.148239 GCTATGAACCTACTTAACTGTGCAAAT 60.148 37.037 0.00 0.00 0.00 2.32
4860 5124 2.530460 AGGGCCTGCAAAATGTATGA 57.470 45.000 4.50 0.00 0.00 2.15
4958 5222 6.369615 CCGATTTCAAATTTTGCAAGGAGATT 59.630 34.615 0.00 0.00 0.00 2.40
5048 5312 0.183492 TCACCAGAGCCTGCAAGTTT 59.817 50.000 0.00 0.00 0.00 2.66
5188 5452 7.119262 GGTGCATACCTTGTATACACCATAATC 59.881 40.741 22.88 3.85 44.32 1.75
5238 5502 1.374252 GGAAGCGGCGAACTCTTCA 60.374 57.895 20.93 0.00 38.29 3.02
5413 5677 3.433274 TCAGCGAAATGTCAAGTGATCAC 59.567 43.478 18.47 18.47 0.00 3.06
5430 5694 0.109551 AGACGTGACAGTGATCAGCG 60.110 55.000 0.00 6.63 32.77 5.18
5431 5695 2.071688 AAGACGTGACAGTGATCAGC 57.928 50.000 0.00 0.00 0.00 4.26
5444 5709 1.348064 TCCTGATGGACCAAAGACGT 58.652 50.000 0.00 0.00 37.46 4.34
5569 5834 0.248289 GGATCGACCGGGAAGAAACA 59.752 55.000 6.32 0.00 0.00 2.83
5622 5888 4.574013 GTCATCTCCTAGGTTTGATGCAAG 59.426 45.833 24.09 8.84 37.00 4.01
5739 6010 2.194271 CTTCTCTTCCATTACGGTCGC 58.806 52.381 0.00 0.00 35.57 5.19
5749 6020 2.172483 GACTGCCGGCTTCTCTTCCA 62.172 60.000 29.70 1.91 0.00 3.53
5763 6034 5.539048 TCTTACCTCTTACACAAAGACTGC 58.461 41.667 0.00 0.00 39.36 4.40
5790 6061 6.299141 TCAAGCAACAACCTTCTTCTTATCT 58.701 36.000 0.00 0.00 0.00 1.98
5791 6062 6.560253 TCAAGCAACAACCTTCTTCTTATC 57.440 37.500 0.00 0.00 0.00 1.75
5793 6064 5.278463 GCATCAAGCAACAACCTTCTTCTTA 60.278 40.000 0.00 0.00 44.79 2.10
5794 6065 4.500375 GCATCAAGCAACAACCTTCTTCTT 60.500 41.667 0.00 0.00 44.79 2.52
5795 6066 3.005155 GCATCAAGCAACAACCTTCTTCT 59.995 43.478 0.00 0.00 44.79 2.85
5796 6067 3.311966 GCATCAAGCAACAACCTTCTTC 58.688 45.455 0.00 0.00 44.79 2.87
6127 6401 3.411446 CAGTCTCCAAGCCATAACAACA 58.589 45.455 0.00 0.00 0.00 3.33
6128 6402 2.162408 GCAGTCTCCAAGCCATAACAAC 59.838 50.000 0.00 0.00 0.00 3.32
6129 6403 2.040278 AGCAGTCTCCAAGCCATAACAA 59.960 45.455 0.00 0.00 0.00 2.83
6170 6444 5.221244 ACCTTATTTGAGACAGCACCAAAAC 60.221 40.000 0.00 0.00 34.08 2.43
6173 6447 3.820467 CACCTTATTTGAGACAGCACCAA 59.180 43.478 0.00 0.00 0.00 3.67
6175 6449 3.412386 ACACCTTATTTGAGACAGCACC 58.588 45.455 0.00 0.00 0.00 5.01
6176 6450 5.215160 CAAACACCTTATTTGAGACAGCAC 58.785 41.667 0.00 0.00 39.01 4.40
6224 6502 2.254546 TTTCTGAGTGACGTGGCATT 57.745 45.000 0.00 0.00 0.00 3.56
6225 6503 2.079158 CATTTCTGAGTGACGTGGCAT 58.921 47.619 0.00 0.00 0.00 4.40
6226 6504 1.511850 CATTTCTGAGTGACGTGGCA 58.488 50.000 0.00 0.00 0.00 4.92
6227 6505 0.166814 GCATTTCTGAGTGACGTGGC 59.833 55.000 0.00 0.00 0.00 5.01
6228 6506 1.728971 GAGCATTTCTGAGTGACGTGG 59.271 52.381 0.00 0.00 0.00 4.94
6229 6507 2.681706 AGAGCATTTCTGAGTGACGTG 58.318 47.619 0.00 0.00 33.93 4.49
6230 6508 4.521130 TTAGAGCATTTCTGAGTGACGT 57.479 40.909 0.00 0.00 36.61 4.34
6231 6509 4.686091 TGTTTAGAGCATTTCTGAGTGACG 59.314 41.667 0.00 0.00 36.61 4.35
6232 6510 6.203723 ACTTGTTTAGAGCATTTCTGAGTGAC 59.796 38.462 0.00 0.00 36.61 3.67
6233 6511 6.291377 ACTTGTTTAGAGCATTTCTGAGTGA 58.709 36.000 0.00 0.00 36.61 3.41
6234 6512 6.551385 ACTTGTTTAGAGCATTTCTGAGTG 57.449 37.500 0.00 0.00 36.61 3.51
6235 6513 7.386299 CAGTACTTGTTTAGAGCATTTCTGAGT 59.614 37.037 0.00 0.00 36.61 3.41
6236 6514 7.386299 ACAGTACTTGTTTAGAGCATTTCTGAG 59.614 37.037 0.00 0.00 36.31 3.35
6237 6515 7.171508 CACAGTACTTGTTTAGAGCATTTCTGA 59.828 37.037 0.00 0.00 38.16 3.27
6238 6516 7.293745 CACAGTACTTGTTTAGAGCATTTCTG 58.706 38.462 0.00 0.00 38.16 3.02
6239 6517 6.073003 GCACAGTACTTGTTTAGAGCATTTCT 60.073 38.462 0.00 0.00 38.16 2.52
6240 6518 6.073003 AGCACAGTACTTGTTTAGAGCATTTC 60.073 38.462 0.00 0.00 38.16 2.17
6241 6519 5.765182 AGCACAGTACTTGTTTAGAGCATTT 59.235 36.000 0.00 0.00 38.16 2.32
6242 6520 5.308825 AGCACAGTACTTGTTTAGAGCATT 58.691 37.500 0.00 0.00 38.16 3.56
6243 6521 4.899502 AGCACAGTACTTGTTTAGAGCAT 58.100 39.130 0.00 0.00 38.16 3.79
6244 6522 4.336889 AGCACAGTACTTGTTTAGAGCA 57.663 40.909 0.00 0.00 38.16 4.26
6245 6523 4.327627 GCTAGCACAGTACTTGTTTAGAGC 59.672 45.833 10.63 0.00 38.16 4.09
6246 6524 5.715070 AGCTAGCACAGTACTTGTTTAGAG 58.285 41.667 18.83 0.00 38.16 2.43
6247 6525 5.243060 TGAGCTAGCACAGTACTTGTTTAGA 59.757 40.000 18.83 0.00 38.16 2.10
6248 6526 5.470368 TGAGCTAGCACAGTACTTGTTTAG 58.530 41.667 18.83 4.18 38.16 1.85
6249 6527 5.462530 TGAGCTAGCACAGTACTTGTTTA 57.537 39.130 18.83 0.00 38.16 2.01
6250 6528 4.310769 CTGAGCTAGCACAGTACTTGTTT 58.689 43.478 27.95 0.00 38.16 2.83
6251 6529 3.306364 CCTGAGCTAGCACAGTACTTGTT 60.306 47.826 31.65 3.05 38.16 2.83
6252 6530 2.232452 CCTGAGCTAGCACAGTACTTGT 59.768 50.000 31.65 3.57 41.94 3.16
6253 6531 2.493675 TCCTGAGCTAGCACAGTACTTG 59.506 50.000 31.65 20.14 33.75 3.16
6254 6532 2.494073 GTCCTGAGCTAGCACAGTACTT 59.506 50.000 31.65 5.03 33.75 2.24
6255 6533 2.096248 GTCCTGAGCTAGCACAGTACT 58.904 52.381 31.65 5.78 33.75 2.73
6256 6534 1.819288 TGTCCTGAGCTAGCACAGTAC 59.181 52.381 31.65 28.03 33.75 2.73
6257 6535 2.215942 TGTCCTGAGCTAGCACAGTA 57.784 50.000 31.65 19.81 33.75 2.74
6258 6536 1.001406 GTTGTCCTGAGCTAGCACAGT 59.999 52.381 31.65 7.64 33.75 3.55
6259 6537 1.274728 AGTTGTCCTGAGCTAGCACAG 59.725 52.381 28.95 28.95 35.04 3.66
6260 6538 1.001293 CAGTTGTCCTGAGCTAGCACA 59.999 52.381 18.83 16.42 44.49 4.57
6261 6539 1.674221 CCAGTTGTCCTGAGCTAGCAC 60.674 57.143 18.83 11.88 44.49 4.40
6262 6540 0.610174 CCAGTTGTCCTGAGCTAGCA 59.390 55.000 18.83 0.00 44.49 3.49
6263 6541 0.610687 ACCAGTTGTCCTGAGCTAGC 59.389 55.000 6.62 6.62 44.49 3.42
6264 6542 3.677424 GCTAACCAGTTGTCCTGAGCTAG 60.677 52.174 0.00 0.00 44.49 3.42
6265 6543 2.233922 GCTAACCAGTTGTCCTGAGCTA 59.766 50.000 0.00 0.00 44.49 3.32
6266 6544 1.002544 GCTAACCAGTTGTCCTGAGCT 59.997 52.381 0.00 0.00 44.49 4.09
6267 6545 1.443802 GCTAACCAGTTGTCCTGAGC 58.556 55.000 0.00 0.00 44.49 4.26
6268 6546 1.272490 TCGCTAACCAGTTGTCCTGAG 59.728 52.381 0.00 0.00 44.49 3.35
6269 6547 1.334160 TCGCTAACCAGTTGTCCTGA 58.666 50.000 0.00 0.00 44.49 3.86
6270 6548 2.002586 CATCGCTAACCAGTTGTCCTG 58.997 52.381 0.00 0.00 41.15 3.86
6271 6549 1.676014 GCATCGCTAACCAGTTGTCCT 60.676 52.381 0.00 0.00 0.00 3.85
6272 6550 0.727398 GCATCGCTAACCAGTTGTCC 59.273 55.000 0.00 0.00 0.00 4.02
6273 6551 1.438651 TGCATCGCTAACCAGTTGTC 58.561 50.000 0.00 0.00 0.00 3.18
6274 6552 1.890876 TTGCATCGCTAACCAGTTGT 58.109 45.000 0.00 0.00 0.00 3.32
6275 6553 2.987413 TTTGCATCGCTAACCAGTTG 57.013 45.000 0.00 0.00 0.00 3.16
6276 6554 3.119495 GGATTTTGCATCGCTAACCAGTT 60.119 43.478 0.00 0.00 0.00 3.16
6277 6555 2.423538 GGATTTTGCATCGCTAACCAGT 59.576 45.455 0.00 0.00 0.00 4.00
6278 6556 2.423185 TGGATTTTGCATCGCTAACCAG 59.577 45.455 0.00 0.00 0.00 4.00
6279 6557 2.423185 CTGGATTTTGCATCGCTAACCA 59.577 45.455 0.00 0.00 0.00 3.67
6280 6558 2.423538 ACTGGATTTTGCATCGCTAACC 59.576 45.455 0.00 0.00 0.00 2.85
6281 6559 3.119849 ACACTGGATTTTGCATCGCTAAC 60.120 43.478 0.00 0.00 0.00 2.34
6282 6560 3.081061 ACACTGGATTTTGCATCGCTAA 58.919 40.909 0.00 0.00 0.00 3.09
6283 6561 2.419673 CACACTGGATTTTGCATCGCTA 59.580 45.455 0.00 0.00 0.00 4.26
6284 6562 1.200716 CACACTGGATTTTGCATCGCT 59.799 47.619 0.00 0.00 0.00 4.93
6285 6563 1.068333 ACACACTGGATTTTGCATCGC 60.068 47.619 0.00 0.00 0.00 4.58
6286 6564 2.995466 ACACACTGGATTTTGCATCG 57.005 45.000 0.00 0.00 0.00 3.84
6287 6565 4.479619 GAGAACACACTGGATTTTGCATC 58.520 43.478 0.00 0.00 0.00 3.91
6288 6566 3.256631 GGAGAACACACTGGATTTTGCAT 59.743 43.478 0.00 0.00 0.00 3.96
6289 6567 2.622942 GGAGAACACACTGGATTTTGCA 59.377 45.455 0.00 0.00 0.00 4.08
6290 6568 2.622942 TGGAGAACACACTGGATTTTGC 59.377 45.455 0.00 0.00 0.00 3.68
6291 6569 3.885297 ACTGGAGAACACACTGGATTTTG 59.115 43.478 0.00 0.00 0.00 2.44
6292 6570 4.137543 GACTGGAGAACACACTGGATTTT 58.862 43.478 0.00 0.00 0.00 1.82
6293 6571 3.496870 GGACTGGAGAACACACTGGATTT 60.497 47.826 0.00 0.00 0.00 2.17
6294 6572 2.039084 GGACTGGAGAACACACTGGATT 59.961 50.000 0.00 0.00 0.00 3.01
6295 6573 1.625818 GGACTGGAGAACACACTGGAT 59.374 52.381 0.00 0.00 0.00 3.41
6296 6574 1.048601 GGACTGGAGAACACACTGGA 58.951 55.000 0.00 0.00 0.00 3.86
6297 6575 0.035458 GGGACTGGAGAACACACTGG 59.965 60.000 0.00 0.00 0.00 4.00
6298 6576 0.758734 TGGGACTGGAGAACACACTG 59.241 55.000 0.00 0.00 0.00 3.66
6299 6577 1.507140 TTGGGACTGGAGAACACACT 58.493 50.000 0.00 0.00 0.00 3.55
6300 6578 2.568623 ATTGGGACTGGAGAACACAC 57.431 50.000 0.00 0.00 0.00 3.82
6301 6579 3.248024 AGTATTGGGACTGGAGAACACA 58.752 45.455 0.00 0.00 0.00 3.72
6302 6580 3.983044 AGTATTGGGACTGGAGAACAC 57.017 47.619 0.00 0.00 0.00 3.32
6303 6581 3.907474 TGAAGTATTGGGACTGGAGAACA 59.093 43.478 0.00 0.00 0.00 3.18
6304 6582 4.020128 ACTGAAGTATTGGGACTGGAGAAC 60.020 45.833 0.00 0.00 0.00 3.01
6305 6583 4.020218 CACTGAAGTATTGGGACTGGAGAA 60.020 45.833 0.00 0.00 0.00 2.87
6306 6584 3.515502 CACTGAAGTATTGGGACTGGAGA 59.484 47.826 0.00 0.00 0.00 3.71
6307 6585 3.369892 CCACTGAAGTATTGGGACTGGAG 60.370 52.174 0.00 0.00 0.00 3.86
6308 6586 2.571653 CCACTGAAGTATTGGGACTGGA 59.428 50.000 0.00 0.00 0.00 3.86
6309 6587 2.571653 TCCACTGAAGTATTGGGACTGG 59.428 50.000 0.00 0.00 30.37 4.00
6310 6588 3.981071 TCCACTGAAGTATTGGGACTG 57.019 47.619 0.00 0.00 30.37 3.51
6311 6589 4.559862 CTTCCACTGAAGTATTGGGACT 57.440 45.455 0.00 0.00 42.55 3.85
6322 6600 0.601046 CTGCTCGCACTTCCACTGAA 60.601 55.000 0.00 0.00 0.00 3.02
6323 6601 1.005748 CTGCTCGCACTTCCACTGA 60.006 57.895 0.00 0.00 0.00 3.41
6324 6602 0.390866 ATCTGCTCGCACTTCCACTG 60.391 55.000 0.00 0.00 0.00 3.66
6325 6603 1.186200 TATCTGCTCGCACTTCCACT 58.814 50.000 0.00 0.00 0.00 4.00
6326 6604 2.131183 GATATCTGCTCGCACTTCCAC 58.869 52.381 0.00 0.00 0.00 4.02
6327 6605 2.034878 AGATATCTGCTCGCACTTCCA 58.965 47.619 3.89 0.00 0.00 3.53
6328 6606 2.402305 CAGATATCTGCTCGCACTTCC 58.598 52.381 19.47 0.00 37.15 3.46
6344 6622 9.725019 TGAGACAATATTAAGTTGTGAACAGAT 57.275 29.630 12.24 0.00 39.72 2.90
6345 6623 9.208022 CTGAGACAATATTAAGTTGTGAACAGA 57.792 33.333 12.24 0.00 39.72 3.41
6346 6624 9.208022 TCTGAGACAATATTAAGTTGTGAACAG 57.792 33.333 12.24 15.05 39.72 3.16
6347 6625 9.208022 CTCTGAGACAATATTAAGTTGTGAACA 57.792 33.333 12.24 8.91 39.72 3.18
6348 6626 8.660373 CCTCTGAGACAATATTAAGTTGTGAAC 58.340 37.037 6.17 5.86 39.72 3.18
6349 6627 7.334421 GCCTCTGAGACAATATTAAGTTGTGAA 59.666 37.037 6.17 0.44 39.72 3.18
6350 6628 6.818644 GCCTCTGAGACAATATTAAGTTGTGA 59.181 38.462 6.17 4.71 39.72 3.58
6351 6629 6.595326 TGCCTCTGAGACAATATTAAGTTGTG 59.405 38.462 6.17 1.29 39.72 3.33
6352 6630 6.711277 TGCCTCTGAGACAATATTAAGTTGT 58.289 36.000 6.17 8.32 42.13 3.32
6353 6631 7.615582 TTGCCTCTGAGACAATATTAAGTTG 57.384 36.000 6.17 2.73 0.00 3.16
6354 6632 8.814038 AATTGCCTCTGAGACAATATTAAGTT 57.186 30.769 17.70 0.98 33.01 2.66
6355 6633 8.814038 AAATTGCCTCTGAGACAATATTAAGT 57.186 30.769 17.70 0.87 33.01 2.24
6356 6634 8.066595 CGAAATTGCCTCTGAGACAATATTAAG 58.933 37.037 17.70 6.46 33.01 1.85
6357 6635 7.012327 CCGAAATTGCCTCTGAGACAATATTAA 59.988 37.037 17.70 0.00 33.01 1.40
6358 6636 6.483307 CCGAAATTGCCTCTGAGACAATATTA 59.517 38.462 17.70 0.00 33.01 0.98
6359 6637 5.297776 CCGAAATTGCCTCTGAGACAATATT 59.702 40.000 17.70 13.83 33.01 1.28
6360 6638 4.818546 CCGAAATTGCCTCTGAGACAATAT 59.181 41.667 17.70 7.37 33.01 1.28
6361 6639 4.081142 TCCGAAATTGCCTCTGAGACAATA 60.081 41.667 17.70 1.52 33.01 1.90
6362 6640 3.012518 CCGAAATTGCCTCTGAGACAAT 58.987 45.455 12.66 12.66 35.59 2.71
6363 6641 2.038426 TCCGAAATTGCCTCTGAGACAA 59.962 45.455 8.86 8.86 0.00 3.18
6364 6642 1.623311 TCCGAAATTGCCTCTGAGACA 59.377 47.619 6.17 0.00 0.00 3.41
6365 6643 2.386661 TCCGAAATTGCCTCTGAGAC 57.613 50.000 6.17 0.00 0.00 3.36
6366 6644 4.162320 ACTTATCCGAAATTGCCTCTGAGA 59.838 41.667 6.17 0.00 0.00 3.27
6367 6645 4.446371 ACTTATCCGAAATTGCCTCTGAG 58.554 43.478 0.00 0.00 0.00 3.35
6368 6646 4.487714 ACTTATCCGAAATTGCCTCTGA 57.512 40.909 0.00 0.00 0.00 3.27
6369 6647 5.360591 AGTACTTATCCGAAATTGCCTCTG 58.639 41.667 0.00 0.00 0.00 3.35
6370 6648 5.615925 AGTACTTATCCGAAATTGCCTCT 57.384 39.130 0.00 0.00 0.00 3.69
6371 6649 5.007724 CCAAGTACTTATCCGAAATTGCCTC 59.992 44.000 8.04 0.00 0.00 4.70
6372 6650 4.881850 CCAAGTACTTATCCGAAATTGCCT 59.118 41.667 8.04 0.00 0.00 4.75
6373 6651 4.036380 CCCAAGTACTTATCCGAAATTGCC 59.964 45.833 8.04 0.00 0.00 4.52
6374 6652 4.036380 CCCCAAGTACTTATCCGAAATTGC 59.964 45.833 8.04 0.00 0.00 3.56
6375 6653 5.190677 ACCCCAAGTACTTATCCGAAATTG 58.809 41.667 8.04 0.00 0.00 2.32
6376 6654 5.446260 ACCCCAAGTACTTATCCGAAATT 57.554 39.130 8.04 0.00 0.00 1.82
6377 6655 5.446260 AACCCCAAGTACTTATCCGAAAT 57.554 39.130 8.04 0.00 0.00 2.17
6378 6656 4.914177 AACCCCAAGTACTTATCCGAAA 57.086 40.909 8.04 0.00 0.00 3.46
6379 6657 4.162131 GGTAACCCCAAGTACTTATCCGAA 59.838 45.833 8.04 0.00 0.00 4.30
6380 6658 3.706086 GGTAACCCCAAGTACTTATCCGA 59.294 47.826 8.04 0.00 0.00 4.55
6381 6659 3.491447 CGGTAACCCCAAGTACTTATCCG 60.491 52.174 8.04 10.39 0.00 4.18
6382 6660 3.452264 ACGGTAACCCCAAGTACTTATCC 59.548 47.826 8.04 2.95 0.00 2.59
6383 6661 4.160252 TGACGGTAACCCCAAGTACTTATC 59.840 45.833 8.04 0.00 0.00 1.75
6384 6662 4.095946 TGACGGTAACCCCAAGTACTTAT 58.904 43.478 8.04 0.00 0.00 1.73
6385 6663 3.505386 TGACGGTAACCCCAAGTACTTA 58.495 45.455 8.04 0.00 0.00 2.24
6386 6664 2.328319 TGACGGTAACCCCAAGTACTT 58.672 47.619 1.12 1.12 0.00 2.24
6387 6665 2.014010 TGACGGTAACCCCAAGTACT 57.986 50.000 0.00 0.00 0.00 2.73
6388 6666 2.837532 TTGACGGTAACCCCAAGTAC 57.162 50.000 0.00 0.00 0.00 2.73
6389 6667 3.136260 ACTTTTGACGGTAACCCCAAGTA 59.864 43.478 0.00 0.00 0.00 2.24
6390 6668 2.092267 ACTTTTGACGGTAACCCCAAGT 60.092 45.455 0.00 0.00 0.00 3.16
6391 6669 2.578786 ACTTTTGACGGTAACCCCAAG 58.421 47.619 0.00 0.00 0.00 3.61
6392 6670 2.688958 CAACTTTTGACGGTAACCCCAA 59.311 45.455 0.00 0.00 0.00 4.12
6393 6671 2.299521 CAACTTTTGACGGTAACCCCA 58.700 47.619 0.00 0.00 0.00 4.96
6394 6672 1.610038 CCAACTTTTGACGGTAACCCC 59.390 52.381 0.00 0.00 0.00 4.95
6395 6673 2.574450 TCCAACTTTTGACGGTAACCC 58.426 47.619 0.00 0.00 0.00 4.11
6396 6674 4.841443 ATTCCAACTTTTGACGGTAACC 57.159 40.909 0.00 0.00 0.00 2.85
6397 6675 5.684184 GTCAATTCCAACTTTTGACGGTAAC 59.316 40.000 0.00 0.00 39.67 2.50
6398 6676 5.221087 GGTCAATTCCAACTTTTGACGGTAA 60.221 40.000 8.43 0.00 46.43 2.85
6399 6677 4.276431 GGTCAATTCCAACTTTTGACGGTA 59.724 41.667 8.43 0.00 46.43 4.02
6400 6678 3.067601 GGTCAATTCCAACTTTTGACGGT 59.932 43.478 8.43 0.00 46.43 4.83
6401 6679 3.638484 GGTCAATTCCAACTTTTGACGG 58.362 45.455 8.43 0.00 46.43 4.79
6402 6680 3.002862 TCGGTCAATTCCAACTTTTGACG 59.997 43.478 8.43 5.27 46.43 4.35
6403 6681 4.561735 TCGGTCAATTCCAACTTTTGAC 57.438 40.909 6.50 6.50 45.33 3.18
6404 6682 5.584253 TTTCGGTCAATTCCAACTTTTGA 57.416 34.783 0.00 0.00 0.00 2.69
6405 6683 5.982516 TCATTTCGGTCAATTCCAACTTTTG 59.017 36.000 0.00 0.00 0.00 2.44
6406 6684 5.983118 GTCATTTCGGTCAATTCCAACTTTT 59.017 36.000 0.00 0.00 0.00 2.27
6407 6685 5.068460 TGTCATTTCGGTCAATTCCAACTTT 59.932 36.000 0.00 0.00 0.00 2.66
6408 6686 4.582656 TGTCATTTCGGTCAATTCCAACTT 59.417 37.500 0.00 0.00 0.00 2.66
6409 6687 4.141287 TGTCATTTCGGTCAATTCCAACT 58.859 39.130 0.00 0.00 0.00 3.16
6410 6688 4.023193 ACTGTCATTTCGGTCAATTCCAAC 60.023 41.667 0.00 0.00 0.00 3.77
6411 6689 4.141287 ACTGTCATTTCGGTCAATTCCAA 58.859 39.130 0.00 0.00 0.00 3.53
6412 6690 3.750371 ACTGTCATTTCGGTCAATTCCA 58.250 40.909 0.00 0.00 0.00 3.53
6413 6691 4.766404 AACTGTCATTTCGGTCAATTCC 57.234 40.909 0.00 0.00 0.00 3.01
6414 6692 6.205784 TGAAAACTGTCATTTCGGTCAATTC 58.794 36.000 1.76 0.00 39.17 2.17
6415 6693 6.142818 TGAAAACTGTCATTTCGGTCAATT 57.857 33.333 1.76 0.00 39.17 2.32
6416 6694 5.766150 TGAAAACTGTCATTTCGGTCAAT 57.234 34.783 1.76 0.00 39.17 2.57
6417 6695 5.336744 GTTGAAAACTGTCATTTCGGTCAA 58.663 37.500 1.76 0.00 45.32 3.18
6418 6696 4.915704 GTTGAAAACTGTCATTTCGGTCA 58.084 39.130 1.76 0.00 45.32 4.02
6438 6716 8.076178 GTGCACAAACTTTATCAACTAGATGTT 58.924 33.333 13.17 0.00 37.57 2.71
6439 6717 7.445402 AGTGCACAAACTTTATCAACTAGATGT 59.555 33.333 21.04 0.00 37.57 3.06
6440 6718 7.810658 AGTGCACAAACTTTATCAACTAGATG 58.189 34.615 21.04 0.00 37.57 2.90
6441 6719 7.986085 AGTGCACAAACTTTATCAACTAGAT 57.014 32.000 21.04 0.00 40.86 1.98
6442 6720 7.801716 AAGTGCACAAACTTTATCAACTAGA 57.198 32.000 21.04 0.00 37.05 2.43
6448 6726 9.853555 CCATTAATAAGTGCACAAACTTTATCA 57.146 29.630 21.04 5.11 40.77 2.15
6449 6727 9.301153 CCCATTAATAAGTGCACAAACTTTATC 57.699 33.333 21.04 0.00 40.77 1.75
6450 6728 8.811994 ACCCATTAATAAGTGCACAAACTTTAT 58.188 29.630 21.04 10.80 40.77 1.40
6451 6729 8.085296 CACCCATTAATAAGTGCACAAACTTTA 58.915 33.333 21.04 8.78 40.77 1.85
6452 6730 6.928492 CACCCATTAATAAGTGCACAAACTTT 59.072 34.615 21.04 6.56 40.77 2.66
6453 6731 6.454795 CACCCATTAATAAGTGCACAAACTT 58.545 36.000 21.04 6.97 42.89 2.66
6454 6732 5.047377 CCACCCATTAATAAGTGCACAAACT 60.047 40.000 21.04 3.10 0.00 2.66
6455 6733 5.047660 TCCACCCATTAATAAGTGCACAAAC 60.048 40.000 21.04 0.00 0.00 2.93
6456 6734 5.080337 TCCACCCATTAATAAGTGCACAAA 58.920 37.500 21.04 6.61 0.00 2.83
6457 6735 4.667573 TCCACCCATTAATAAGTGCACAA 58.332 39.130 21.04 7.03 0.00 3.33
6458 6736 4.308526 TCCACCCATTAATAAGTGCACA 57.691 40.909 21.04 0.00 0.00 4.57
6459 6737 5.133221 AGATCCACCCATTAATAAGTGCAC 58.867 41.667 9.40 9.40 0.00 4.57
6460 6738 5.104151 TGAGATCCACCCATTAATAAGTGCA 60.104 40.000 10.24 0.00 0.00 4.57
6461 6739 5.376625 TGAGATCCACCCATTAATAAGTGC 58.623 41.667 10.24 0.57 0.00 4.40
6462 6740 7.880160 TTTGAGATCCACCCATTAATAAGTG 57.120 36.000 9.17 9.17 0.00 3.16
6463 6741 8.893563 TTTTTGAGATCCACCCATTAATAAGT 57.106 30.769 0.00 0.00 0.00 2.24
6464 6742 9.754382 CATTTTTGAGATCCACCCATTAATAAG 57.246 33.333 0.00 0.00 0.00 1.73
6465 6743 9.265862 ACATTTTTGAGATCCACCCATTAATAA 57.734 29.630 0.00 0.00 0.00 1.40
6466 6744 8.837099 ACATTTTTGAGATCCACCCATTAATA 57.163 30.769 0.00 0.00 0.00 0.98
6467 6745 7.738437 ACATTTTTGAGATCCACCCATTAAT 57.262 32.000 0.00 0.00 0.00 1.40
6468 6746 7.552050 AACATTTTTGAGATCCACCCATTAA 57.448 32.000 0.00 0.00 0.00 1.40
6469 6747 8.837099 ATAACATTTTTGAGATCCACCCATTA 57.163 30.769 0.00 0.00 0.00 1.90
6470 6748 7.399765 TGATAACATTTTTGAGATCCACCCATT 59.600 33.333 0.00 0.00 0.00 3.16
6471 6749 6.896860 TGATAACATTTTTGAGATCCACCCAT 59.103 34.615 0.00 0.00 0.00 4.00
6472 6750 6.252233 TGATAACATTTTTGAGATCCACCCA 58.748 36.000 0.00 0.00 0.00 4.51
6473 6751 6.773976 TGATAACATTTTTGAGATCCACCC 57.226 37.500 0.00 0.00 0.00 4.61
6474 6752 8.469200 TGATTGATAACATTTTTGAGATCCACC 58.531 33.333 0.00 0.00 0.00 4.61
6475 6753 9.512435 CTGATTGATAACATTTTTGAGATCCAC 57.488 33.333 0.00 0.00 0.00 4.02
6476 6754 8.192774 GCTGATTGATAACATTTTTGAGATCCA 58.807 33.333 0.00 0.00 0.00 3.41
6477 6755 7.377928 CGCTGATTGATAACATTTTTGAGATCC 59.622 37.037 0.00 0.00 0.00 3.36
6478 6756 7.377928 CCGCTGATTGATAACATTTTTGAGATC 59.622 37.037 0.00 0.00 0.00 2.75
6479 6757 7.198390 CCGCTGATTGATAACATTTTTGAGAT 58.802 34.615 0.00 0.00 0.00 2.75
6480 6758 6.404623 CCCGCTGATTGATAACATTTTTGAGA 60.405 38.462 0.00 0.00 0.00 3.27
6481 6759 5.745294 CCCGCTGATTGATAACATTTTTGAG 59.255 40.000 0.00 0.00 0.00 3.02
6482 6760 5.417266 TCCCGCTGATTGATAACATTTTTGA 59.583 36.000 0.00 0.00 0.00 2.69
6483 6761 5.649557 TCCCGCTGATTGATAACATTTTTG 58.350 37.500 0.00 0.00 0.00 2.44
6484 6762 5.913137 TCCCGCTGATTGATAACATTTTT 57.087 34.783 0.00 0.00 0.00 1.94
6485 6763 5.913137 TTCCCGCTGATTGATAACATTTT 57.087 34.783 0.00 0.00 0.00 1.82
6486 6764 5.652014 TCTTTCCCGCTGATTGATAACATTT 59.348 36.000 0.00 0.00 0.00 2.32
6487 6765 5.192927 TCTTTCCCGCTGATTGATAACATT 58.807 37.500 0.00 0.00 0.00 2.71
6488 6766 4.780815 TCTTTCCCGCTGATTGATAACAT 58.219 39.130 0.00 0.00 0.00 2.71
6489 6767 4.214986 TCTTTCCCGCTGATTGATAACA 57.785 40.909 0.00 0.00 0.00 2.41
6490 6768 5.123979 AGTTTCTTTCCCGCTGATTGATAAC 59.876 40.000 0.00 0.00 0.00 1.89
6491 6769 5.253330 AGTTTCTTTCCCGCTGATTGATAA 58.747 37.500 0.00 0.00 0.00 1.75
6492 6770 4.843728 AGTTTCTTTCCCGCTGATTGATA 58.156 39.130 0.00 0.00 0.00 2.15
6493 6771 3.690460 AGTTTCTTTCCCGCTGATTGAT 58.310 40.909 0.00 0.00 0.00 2.57
6494 6772 3.074412 GAGTTTCTTTCCCGCTGATTGA 58.926 45.455 0.00 0.00 0.00 2.57
6495 6773 3.077359 AGAGTTTCTTTCCCGCTGATTG 58.923 45.455 0.00 0.00 0.00 2.67
6496 6774 3.425162 AGAGTTTCTTTCCCGCTGATT 57.575 42.857 0.00 0.00 0.00 2.57
6497 6775 3.425162 AAGAGTTTCTTTCCCGCTGAT 57.575 42.857 0.00 0.00 31.57 2.90
6498 6776 2.930826 AAGAGTTTCTTTCCCGCTGA 57.069 45.000 0.00 0.00 31.57 4.26
6499 6777 3.315191 TCAAAAGAGTTTCTTTCCCGCTG 59.685 43.478 4.68 0.49 45.19 5.18
6500 6778 3.551846 TCAAAAGAGTTTCTTTCCCGCT 58.448 40.909 4.68 0.00 45.19 5.52
6501 6779 3.982576 TCAAAAGAGTTTCTTTCCCGC 57.017 42.857 4.68 0.00 45.19 6.13
6502 6780 4.793028 GCCTTCAAAAGAGTTTCTTTCCCG 60.793 45.833 4.68 0.00 45.19 5.14
6503 6781 4.621991 GCCTTCAAAAGAGTTTCTTTCCC 58.378 43.478 4.68 0.00 45.19 3.97
6504 6782 4.290969 CGCCTTCAAAAGAGTTTCTTTCC 58.709 43.478 4.68 0.00 45.19 3.13
6505 6783 4.202020 ACCGCCTTCAAAAGAGTTTCTTTC 60.202 41.667 4.68 0.00 45.19 2.62
6507 6785 3.066760 CACCGCCTTCAAAAGAGTTTCTT 59.933 43.478 0.00 0.00 38.59 2.52
6508 6786 2.618709 CACCGCCTTCAAAAGAGTTTCT 59.381 45.455 0.00 0.00 0.00 2.52
6509 6787 2.287608 CCACCGCCTTCAAAAGAGTTTC 60.288 50.000 0.00 0.00 0.00 2.78
6510 6788 1.681264 CCACCGCCTTCAAAAGAGTTT 59.319 47.619 0.00 0.00 0.00 2.66
6511 6789 1.318576 CCACCGCCTTCAAAAGAGTT 58.681 50.000 0.00 0.00 0.00 3.01
6512 6790 1.172812 GCCACCGCCTTCAAAAGAGT 61.173 55.000 0.00 0.00 0.00 3.24
6513 6791 1.172180 TGCCACCGCCTTCAAAAGAG 61.172 55.000 0.00 0.00 0.00 2.85
6514 6792 1.152860 TGCCACCGCCTTCAAAAGA 60.153 52.632 0.00 0.00 0.00 2.52
6515 6793 1.007387 GTGCCACCGCCTTCAAAAG 60.007 57.895 0.00 0.00 0.00 2.27
6516 6794 1.733402 CTGTGCCACCGCCTTCAAAA 61.733 55.000 0.00 0.00 0.00 2.44
6517 6795 2.124109 TGTGCCACCGCCTTCAAA 60.124 55.556 0.00 0.00 0.00 2.69
6518 6796 2.594303 CTGTGCCACCGCCTTCAA 60.594 61.111 0.00 0.00 0.00 2.69
6519 6797 4.641645 CCTGTGCCACCGCCTTCA 62.642 66.667 0.00 0.00 0.00 3.02
6523 6801 4.489771 ATAGCCTGTGCCACCGCC 62.490 66.667 0.00 0.00 38.69 6.13
6524 6802 2.897350 GATAGCCTGTGCCACCGC 60.897 66.667 0.00 0.00 38.69 5.68
6525 6803 2.203070 GGATAGCCTGTGCCACCG 60.203 66.667 0.00 0.00 38.69 4.94
6526 6804 2.193248 GGGATAGCCTGTGCCACC 59.807 66.667 0.00 0.00 38.69 4.61
6527 6805 2.203070 CGGGATAGCCTGTGCCAC 60.203 66.667 0.00 0.00 38.69 5.01
6528 6806 3.479203 CCGGGATAGCCTGTGCCA 61.479 66.667 4.87 0.00 39.04 4.92
6529 6807 2.552231 AAACCGGGATAGCCTGTGCC 62.552 60.000 6.32 0.00 39.04 5.01
6530 6808 0.179468 TAAACCGGGATAGCCTGTGC 59.821 55.000 6.32 0.00 39.04 4.57
6531 6809 2.494059 CATAAACCGGGATAGCCTGTG 58.506 52.381 6.32 0.00 39.04 3.66
6532 6810 1.202770 GCATAAACCGGGATAGCCTGT 60.203 52.381 6.32 0.00 39.04 4.00
6533 6811 1.523758 GCATAAACCGGGATAGCCTG 58.476 55.000 6.32 0.00 40.49 4.85
6534 6812 0.400594 GGCATAAACCGGGATAGCCT 59.599 55.000 16.73 0.00 37.67 4.58
6535 6813 0.109723 TGGCATAAACCGGGATAGCC 59.890 55.000 17.04 17.04 40.93 3.93
6536 6814 1.812571 CATGGCATAAACCGGGATAGC 59.187 52.381 6.32 2.65 0.00 2.97
6537 6815 3.074412 GACATGGCATAAACCGGGATAG 58.926 50.000 6.32 0.00 0.00 2.08
6538 6816 2.549134 CGACATGGCATAAACCGGGATA 60.549 50.000 6.32 0.00 0.00 2.59
6539 6817 1.813862 CGACATGGCATAAACCGGGAT 60.814 52.381 6.32 0.00 0.00 3.85
6540 6818 0.462937 CGACATGGCATAAACCGGGA 60.463 55.000 6.32 0.00 0.00 5.14
6541 6819 1.444119 CCGACATGGCATAAACCGGG 61.444 60.000 6.32 0.00 32.64 5.73
6542 6820 0.746563 ACCGACATGGCATAAACCGG 60.747 55.000 20.03 20.03 43.94 5.28
6543 6821 1.091537 AACCGACATGGCATAAACCG 58.908 50.000 0.00 1.40 43.94 4.44
6544 6822 3.586100 AAAACCGACATGGCATAAACC 57.414 42.857 0.00 0.00 43.94 3.27
6545 6823 5.921408 TGTTAAAAACCGACATGGCATAAAC 59.079 36.000 0.00 0.00 43.94 2.01
6546 6824 6.085555 TGTTAAAAACCGACATGGCATAAA 57.914 33.333 0.00 0.00 43.94 1.40
6547 6825 5.707242 TGTTAAAAACCGACATGGCATAA 57.293 34.783 0.00 0.00 43.94 1.90
6548 6826 5.163602 GGATGTTAAAAACCGACATGGCATA 60.164 40.000 0.00 0.00 43.94 3.14
6549 6827 4.381505 GGATGTTAAAAACCGACATGGCAT 60.382 41.667 0.00 0.00 43.94 4.40
6550 6828 3.057174 GGATGTTAAAAACCGACATGGCA 60.057 43.478 0.00 0.00 43.94 4.92
6551 6829 3.507786 GGATGTTAAAAACCGACATGGC 58.492 45.455 0.00 0.00 43.94 4.40
6552 6830 4.104696 GGGATGTTAAAAACCGACATGG 57.895 45.455 0.00 0.00 46.41 3.66
6558 6836 4.752661 TTCTTCGGGATGTTAAAAACCG 57.247 40.909 5.93 5.93 45.52 4.44
6559 6837 9.083080 CAAATATTCTTCGGGATGTTAAAAACC 57.917 33.333 0.00 0.00 0.00 3.27
6560 6838 9.634163 ACAAATATTCTTCGGGATGTTAAAAAC 57.366 29.630 0.00 0.00 0.00 2.43
6564 6842 9.116067 CCTTACAAATATTCTTCGGGATGTTAA 57.884 33.333 0.00 0.00 0.00 2.01
6565 6843 7.227910 GCCTTACAAATATTCTTCGGGATGTTA 59.772 37.037 0.00 0.00 0.00 2.41
6566 6844 6.039382 GCCTTACAAATATTCTTCGGGATGTT 59.961 38.462 0.00 0.00 0.00 2.71
6567 6845 5.531287 GCCTTACAAATATTCTTCGGGATGT 59.469 40.000 0.00 0.00 0.00 3.06
6568 6846 5.765182 AGCCTTACAAATATTCTTCGGGATG 59.235 40.000 0.00 0.00 0.00 3.51
6569 6847 5.941788 AGCCTTACAAATATTCTTCGGGAT 58.058 37.500 0.00 0.00 0.00 3.85
6570 6848 5.367945 AGCCTTACAAATATTCTTCGGGA 57.632 39.130 0.00 0.00 0.00 5.14
6571 6849 7.118390 CAGATAGCCTTACAAATATTCTTCGGG 59.882 40.741 0.00 0.00 0.00 5.14
6572 6850 7.657761 ACAGATAGCCTTACAAATATTCTTCGG 59.342 37.037 0.00 0.00 0.00 4.30
6573 6851 8.491152 CACAGATAGCCTTACAAATATTCTTCG 58.509 37.037 0.00 0.00 0.00 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.