Multiple sequence alignment - TraesCS2A01G145700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G145700 chr2A 100.000 6099 0 0 1 6099 90588489 90594587 0.000000e+00 11263.0
1 TraesCS2A01G145700 chr2A 96.791 187 6 0 5913 6099 672973069 672973255 4.590000e-81 313.0
2 TraesCS2A01G145700 chr2A 95.676 185 8 0 5915 6099 377026518 377026702 1.290000e-76 298.0
3 TraesCS2A01G145700 chr2A 93.478 184 11 1 5917 6099 475140755 475140938 7.790000e-69 272.0
4 TraesCS2A01G145700 chr2A 87.963 216 20 2 5510 5722 127544509 127544721 3.650000e-62 250.0
5 TraesCS2A01G145700 chr2A 86.992 123 15 1 3848 3970 533322770 533322891 2.960000e-28 137.0
6 TraesCS2A01G145700 chr2D 95.612 2256 72 12 648 2890 92913952 92916193 0.000000e+00 3592.0
7 TraesCS2A01G145700 chr2D 93.966 1044 40 10 4572 5606 92918049 92919078 0.000000e+00 1557.0
8 TraesCS2A01G145700 chr2D 93.237 621 30 7 3963 4579 92916186 92916798 0.000000e+00 904.0
9 TraesCS2A01G145700 chr2D 95.429 175 5 3 5745 5917 92919079 92919252 6.020000e-70 276.0
10 TraesCS2A01G145700 chr2B 93.584 1652 79 17 769 2411 144427556 144429189 0.000000e+00 2438.0
11 TraesCS2A01G145700 chr2B 94.836 794 25 6 3965 4744 144430350 144431141 0.000000e+00 1225.0
12 TraesCS2A01G145700 chr2B 91.691 698 35 17 4829 5516 144431217 144431901 0.000000e+00 946.0
13 TraesCS2A01G145700 chr2B 92.773 595 38 2 1 594 78074044 78073454 0.000000e+00 856.0
14 TraesCS2A01G145700 chr2B 92.828 488 21 5 2406 2890 144429879 144430355 0.000000e+00 695.0
15 TraesCS2A01G145700 chr2B 87.687 601 60 8 2 596 654524505 654525097 0.000000e+00 688.0
16 TraesCS2A01G145700 chr2B 91.034 145 5 3 5773 5917 144431965 144432101 8.070000e-44 189.0
17 TraesCS2A01G145700 chr2B 82.192 73 12 1 647 718 794088214 794088286 1.840000e-05 62.1
18 TraesCS2A01G145700 chr2B 82.192 73 12 1 647 718 794105063 794105135 1.840000e-05 62.1
19 TraesCS2A01G145700 chr4A 88.506 1392 92 24 720 2095 232002956 232004295 0.000000e+00 1622.0
20 TraesCS2A01G145700 chr4A 88.423 596 56 8 1 593 19451682 19451097 0.000000e+00 706.0
21 TraesCS2A01G145700 chr4A 85.067 596 80 5 1 595 578531446 578532033 3.150000e-167 599.0
22 TraesCS2A01G145700 chr4A 96.175 183 7 0 5917 6099 75222942 75223124 3.570000e-77 300.0
23 TraesCS2A01G145700 chr4A 90.404 198 13 3 5520 5714 551528931 551529125 7.840000e-64 255.0
24 TraesCS2A01G145700 chr6A 91.831 710 37 9 2885 3584 122818622 122817924 0.000000e+00 970.0
25 TraesCS2A01G145700 chr6A 90.909 209 16 1 3762 3970 122815603 122815398 1.670000e-70 278.0
26 TraesCS2A01G145700 chr6A 88.136 118 14 0 3855 3972 574460132 574460249 2.290000e-29 141.0
27 TraesCS2A01G145700 chr1B 96.284 592 21 1 3 593 679607835 679608426 0.000000e+00 970.0
28 TraesCS2A01G145700 chr1B 89.791 431 29 5 3107 3529 94684491 94684914 6.960000e-149 538.0
29 TraesCS2A01G145700 chr1B 87.736 212 20 3 5514 5722 384650388 384650180 6.110000e-60 243.0
30 TraesCS2A01G145700 chr1B 86.344 227 18 5 2893 3118 94650902 94651116 1.020000e-57 235.0
31 TraesCS2A01G145700 chr1B 96.667 90 3 0 3881 3970 674454616 674454527 3.810000e-32 150.0
32 TraesCS2A01G145700 chr5B 93.144 598 35 2 1 596 611693811 611694404 0.000000e+00 872.0
33 TraesCS2A01G145700 chr5B 83.848 421 59 7 1 417 401136736 401136321 5.730000e-105 392.0
34 TraesCS2A01G145700 chr5B 93.130 131 9 0 463 593 402732603 402732733 6.240000e-45 193.0
35 TraesCS2A01G145700 chr5B 89.333 150 16 0 2 151 619920801 619920950 8.070000e-44 189.0
36 TraesCS2A01G145700 chr5B 87.218 133 13 3 467 596 401136045 401135914 1.370000e-31 148.0
37 TraesCS2A01G145700 chr5B 90.909 55 5 0 655 709 409055242 409055296 2.360000e-09 75.0
38 TraesCS2A01G145700 chr1D 90.894 593 48 2 1 593 75890219 75890805 0.000000e+00 791.0
39 TraesCS2A01G145700 chr1D 87.179 117 12 1 3854 3970 122526712 122526599 4.960000e-26 130.0
40 TraesCS2A01G145700 chr3B 88.889 594 60 3 2 594 714972061 714971473 0.000000e+00 726.0
41 TraesCS2A01G145700 chr7B 87.905 587 67 4 11 595 687053920 687054504 0.000000e+00 688.0
42 TraesCS2A01G145700 chr7B 77.740 584 116 10 12 593 196004942 196004371 4.530000e-91 346.0
43 TraesCS2A01G145700 chr7B 85.714 70 8 2 524 592 433754359 433754291 8.480000e-09 73.1
44 TraesCS2A01G145700 chr7A 85.833 600 75 8 1 595 734911540 734910946 4.010000e-176 628.0
45 TraesCS2A01G145700 chr7A 94.149 188 10 1 5913 6099 62729764 62729951 1.000000e-72 285.0
46 TraesCS2A01G145700 chr7A 90.452 199 13 2 5519 5714 707816009 707815814 2.180000e-64 257.0
47 TraesCS2A01G145700 chr7A 88.732 213 15 4 5520 5726 534324284 534324493 1.010000e-62 252.0
48 TraesCS2A01G145700 chr7A 87.671 219 18 5 5499 5714 576144298 576144510 4.720000e-61 246.0
49 TraesCS2A01G145700 chr7A 88.462 208 16 5 5518 5720 625541759 625541963 1.700000e-60 244.0
50 TraesCS2A01G145700 chr7A 87.500 216 17 7 5511 5721 105834630 105834840 2.200000e-59 241.0
51 TraesCS2A01G145700 chr7A 93.506 77 4 1 635 710 609380147 609380071 5.000000e-21 113.0
52 TraesCS2A01G145700 chr5D 86.168 535 64 7 55 587 445692033 445692559 2.470000e-158 569.0
53 TraesCS2A01G145700 chr5D 90.104 192 17 2 5910 6099 292678998 292679189 1.310000e-61 248.0
54 TraesCS2A01G145700 chr5D 90.761 184 17 0 5916 6099 384631662 384631479 4.720000e-61 246.0
55 TraesCS2A01G145700 chr6B 77.683 587 117 10 12 596 712992146 712992720 4.530000e-91 346.0
56 TraesCS2A01G145700 chr3A 96.196 184 7 0 5916 6099 572150582 572150399 9.940000e-78 302.0
57 TraesCS2A01G145700 chr3A 91.848 184 14 1 5916 6098 7508868 7508685 7.840000e-64 255.0
58 TraesCS2A01G145700 chr3A 88.128 219 20 3 5507 5722 42955274 42955489 7.840000e-64 255.0
59 TraesCS2A01G145700 chr3A 90.000 200 14 4 5518 5714 566080189 566080385 2.820000e-63 254.0
60 TraesCS2A01G145700 chr3A 90.833 120 11 0 3851 3970 267116766 267116885 1.760000e-35 161.0
61 TraesCS2A01G145700 chr1A 89.202 213 15 5 5514 5722 337147494 337147286 6.060000e-65 259.0
62 TraesCS2A01G145700 chr1A 90.000 200 14 3 5520 5716 20098500 20098304 2.820000e-63 254.0
63 TraesCS2A01G145700 chr1A 89.744 117 12 0 3855 3971 290121569 290121453 3.810000e-32 150.0
64 TraesCS2A01G145700 chr3D 87.324 213 21 3 5511 5720 111673501 111673710 7.900000e-59 239.0
65 TraesCS2A01G145700 chr3D 87.097 62 7 1 638 698 485132739 485132800 1.100000e-07 69.4
66 TraesCS2A01G145700 chr4D 91.453 117 10 0 3854 3970 366971402 366971286 1.760000e-35 161.0
67 TraesCS2A01G145700 chr6D 89.076 119 13 0 3855 3973 15534132 15534014 1.370000e-31 148.0
68 TraesCS2A01G145700 chr7D 92.593 81 4 2 635 713 176127898 176127818 1.390000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G145700 chr2A 90588489 90594587 6098 False 11263.00 11263 100.0000 1 6099 1 chr2A.!!$F1 6098
1 TraesCS2A01G145700 chr2D 92913952 92919252 5300 False 1582.25 3592 94.5610 648 5917 4 chr2D.!!$F1 5269
2 TraesCS2A01G145700 chr2B 144427556 144432101 4545 False 1098.60 2438 92.7946 769 5917 5 chr2B.!!$F4 5148
3 TraesCS2A01G145700 chr2B 78073454 78074044 590 True 856.00 856 92.7730 1 594 1 chr2B.!!$R1 593
4 TraesCS2A01G145700 chr2B 654524505 654525097 592 False 688.00 688 87.6870 2 596 1 chr2B.!!$F1 594
5 TraesCS2A01G145700 chr4A 232002956 232004295 1339 False 1622.00 1622 88.5060 720 2095 1 chr4A.!!$F2 1375
6 TraesCS2A01G145700 chr4A 19451097 19451682 585 True 706.00 706 88.4230 1 593 1 chr4A.!!$R1 592
7 TraesCS2A01G145700 chr4A 578531446 578532033 587 False 599.00 599 85.0670 1 595 1 chr4A.!!$F4 594
8 TraesCS2A01G145700 chr6A 122815398 122818622 3224 True 624.00 970 91.3700 2885 3970 2 chr6A.!!$R1 1085
9 TraesCS2A01G145700 chr1B 679607835 679608426 591 False 970.00 970 96.2840 3 593 1 chr1B.!!$F3 590
10 TraesCS2A01G145700 chr5B 611693811 611694404 593 False 872.00 872 93.1440 1 596 1 chr5B.!!$F3 595
11 TraesCS2A01G145700 chr5B 401135914 401136736 822 True 270.00 392 85.5330 1 596 2 chr5B.!!$R1 595
12 TraesCS2A01G145700 chr1D 75890219 75890805 586 False 791.00 791 90.8940 1 593 1 chr1D.!!$F1 592
13 TraesCS2A01G145700 chr3B 714971473 714972061 588 True 726.00 726 88.8890 2 594 1 chr3B.!!$R1 592
14 TraesCS2A01G145700 chr7B 687053920 687054504 584 False 688.00 688 87.9050 11 595 1 chr7B.!!$F1 584
15 TraesCS2A01G145700 chr7B 196004371 196004942 571 True 346.00 346 77.7400 12 593 1 chr7B.!!$R1 581
16 TraesCS2A01G145700 chr7A 734910946 734911540 594 True 628.00 628 85.8330 1 595 1 chr7A.!!$R3 594
17 TraesCS2A01G145700 chr5D 445692033 445692559 526 False 569.00 569 86.1680 55 587 1 chr5D.!!$F2 532
18 TraesCS2A01G145700 chr6B 712992146 712992720 574 False 346.00 346 77.6830 12 596 1 chr6B.!!$F1 584


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
653 898 0.036010 CGAGCACCAGGATTGAACCT 60.036 55.000 0.00 0.00 41.43 3.50 F
673 918 1.067295 TGATGGGCTGGGGATATCAC 58.933 55.000 4.83 0.00 0.00 3.06 F
1560 1831 1.532868 ACAATGAGAGCGTTTGTGAGC 59.467 47.619 0.00 0.00 0.00 4.26 F
2980 3950 0.107410 AAGTGAAACGGTGCACTCCA 60.107 50.000 16.27 5.05 44.06 3.86 F
3794 6913 0.177141 TCTTAGGAATTGGACGCGGG 59.823 55.000 12.47 0.00 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2469 3436 0.034896 AGGGATGTGTGGTCACGAAC 59.965 55.0 0.00 0.00 46.49 3.95 R
2843 3812 4.994217 TGAACATTATGTTGCTCGAGAACA 59.006 37.5 23.37 23.37 41.28 3.18 R
3556 4532 0.167470 CAACAGAAGCATGCGACCAG 59.833 55.0 13.01 5.37 0.00 4.00 R
4767 9160 0.181114 CCATCCAGATCTGCGGGAAA 59.819 55.0 17.76 0.00 44.23 3.13 R
5576 9985 0.038599 TGCTACTCGGTGACCCTACA 59.961 55.0 0.00 0.00 0.00 2.74 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
404 413 2.584391 GCCACCTCTCCCTTCGTGT 61.584 63.158 0.00 0.00 0.00 4.49
410 419 1.071699 CCTCTCCCTTCGTGTTCCAAA 59.928 52.381 0.00 0.00 0.00 3.28
596 841 2.259266 AGAAAACGGTTCGGGCTTTA 57.741 45.000 0.00 0.00 0.00 1.85
597 842 2.148768 AGAAAACGGTTCGGGCTTTAG 58.851 47.619 0.00 0.00 0.00 1.85
598 843 1.875514 GAAAACGGTTCGGGCTTTAGT 59.124 47.619 0.00 0.00 0.00 2.24
599 844 2.837532 AAACGGTTCGGGCTTTAGTA 57.162 45.000 0.00 0.00 0.00 1.82
600 845 3.339253 AAACGGTTCGGGCTTTAGTAT 57.661 42.857 0.00 0.00 0.00 2.12
601 846 2.304751 ACGGTTCGGGCTTTAGTATG 57.695 50.000 0.00 0.00 0.00 2.39
602 847 1.134610 ACGGTTCGGGCTTTAGTATGG 60.135 52.381 0.00 0.00 0.00 2.74
603 848 1.134610 CGGTTCGGGCTTTAGTATGGT 60.135 52.381 0.00 0.00 0.00 3.55
604 849 2.285977 GGTTCGGGCTTTAGTATGGTG 58.714 52.381 0.00 0.00 0.00 4.17
605 850 2.355412 GGTTCGGGCTTTAGTATGGTGT 60.355 50.000 0.00 0.00 0.00 4.16
606 851 2.676342 GTTCGGGCTTTAGTATGGTGTG 59.324 50.000 0.00 0.00 0.00 3.82
607 852 2.181125 TCGGGCTTTAGTATGGTGTGA 58.819 47.619 0.00 0.00 0.00 3.58
608 853 2.167693 TCGGGCTTTAGTATGGTGTGAG 59.832 50.000 0.00 0.00 0.00 3.51
609 854 2.167693 CGGGCTTTAGTATGGTGTGAGA 59.832 50.000 0.00 0.00 0.00 3.27
610 855 3.369052 CGGGCTTTAGTATGGTGTGAGAA 60.369 47.826 0.00 0.00 0.00 2.87
611 856 4.192317 GGGCTTTAGTATGGTGTGAGAAG 58.808 47.826 0.00 0.00 0.00 2.85
612 857 4.323562 GGGCTTTAGTATGGTGTGAGAAGT 60.324 45.833 0.00 0.00 0.00 3.01
613 858 4.870991 GGCTTTAGTATGGTGTGAGAAGTC 59.129 45.833 0.00 0.00 0.00 3.01
614 859 4.870991 GCTTTAGTATGGTGTGAGAAGTCC 59.129 45.833 0.00 0.00 0.00 3.85
615 860 4.713824 TTAGTATGGTGTGAGAAGTCCG 57.286 45.455 0.00 0.00 0.00 4.79
616 861 2.803956 AGTATGGTGTGAGAAGTCCGA 58.196 47.619 0.00 0.00 0.00 4.55
617 862 3.162666 AGTATGGTGTGAGAAGTCCGAA 58.837 45.455 0.00 0.00 0.00 4.30
618 863 2.457366 ATGGTGTGAGAAGTCCGAAC 57.543 50.000 0.00 0.00 0.00 3.95
619 864 1.410004 TGGTGTGAGAAGTCCGAACT 58.590 50.000 0.00 0.00 37.32 3.01
621 866 2.960384 TGGTGTGAGAAGTCCGAACTTA 59.040 45.455 0.00 0.00 45.80 2.24
622 867 3.005472 TGGTGTGAGAAGTCCGAACTTAG 59.995 47.826 0.00 0.00 45.80 2.18
623 868 3.576648 GTGTGAGAAGTCCGAACTTAGG 58.423 50.000 0.00 0.00 45.80 2.69
624 869 3.005578 GTGTGAGAAGTCCGAACTTAGGT 59.994 47.826 0.00 0.00 45.80 3.08
625 870 3.255149 TGTGAGAAGTCCGAACTTAGGTC 59.745 47.826 0.00 0.00 45.80 3.85
626 871 3.506844 GTGAGAAGTCCGAACTTAGGTCT 59.493 47.826 0.00 0.00 45.80 3.85
627 872 3.506455 TGAGAAGTCCGAACTTAGGTCTG 59.494 47.826 0.00 0.00 45.80 3.51
628 873 2.826725 AGAAGTCCGAACTTAGGTCTGG 59.173 50.000 0.00 0.00 45.80 3.86
629 874 2.599408 AGTCCGAACTTAGGTCTGGA 57.401 50.000 6.73 6.73 28.74 3.86
630 875 2.448453 AGTCCGAACTTAGGTCTGGAG 58.552 52.381 10.23 0.00 32.00 3.86
631 876 1.477295 GTCCGAACTTAGGTCTGGAGG 59.523 57.143 10.23 0.00 32.00 4.30
632 877 1.076677 TCCGAACTTAGGTCTGGAGGT 59.923 52.381 6.73 0.00 0.00 3.85
633 878 1.900486 CCGAACTTAGGTCTGGAGGTT 59.100 52.381 2.78 0.00 0.00 3.50
634 879 2.094130 CCGAACTTAGGTCTGGAGGTTC 60.094 54.545 2.78 0.00 0.00 3.62
635 880 2.415625 CGAACTTAGGTCTGGAGGTTCG 60.416 54.545 10.66 10.66 45.62 3.95
636 881 2.599408 ACTTAGGTCTGGAGGTTCGA 57.401 50.000 0.00 0.00 0.00 3.71
637 882 2.448453 ACTTAGGTCTGGAGGTTCGAG 58.552 52.381 0.00 0.00 0.00 4.04
638 883 1.135333 CTTAGGTCTGGAGGTTCGAGC 59.865 57.143 0.00 0.00 0.00 5.03
639 884 0.039180 TAGGTCTGGAGGTTCGAGCA 59.961 55.000 0.53 0.00 0.00 4.26
640 885 1.079750 GGTCTGGAGGTTCGAGCAC 60.080 63.158 0.53 0.00 0.00 4.40
641 886 1.079750 GTCTGGAGGTTCGAGCACC 60.080 63.158 0.53 0.00 37.04 5.01
642 887 1.533033 TCTGGAGGTTCGAGCACCA 60.533 57.895 8.93 11.97 39.62 4.17
643 888 1.079543 CTGGAGGTTCGAGCACCAG 60.080 63.158 22.22 22.22 39.62 4.00
644 889 2.266055 GGAGGTTCGAGCACCAGG 59.734 66.667 8.93 0.00 39.62 4.45
645 890 2.283529 GGAGGTTCGAGCACCAGGA 61.284 63.158 8.93 0.00 39.62 3.86
646 891 1.617947 GGAGGTTCGAGCACCAGGAT 61.618 60.000 8.93 0.00 39.62 3.24
652 897 0.036388 TCGAGCACCAGGATTGAACC 60.036 55.000 0.00 0.00 0.00 3.62
653 898 0.036010 CGAGCACCAGGATTGAACCT 60.036 55.000 0.00 0.00 41.43 3.50
656 901 1.425066 AGCACCAGGATTGAACCTTGA 59.575 47.619 0.00 0.00 38.32 3.02
661 906 1.753073 CAGGATTGAACCTTGATGGGC 59.247 52.381 0.00 0.00 41.11 5.36
666 911 1.380380 GAACCTTGATGGGCTGGGG 60.380 63.158 0.00 0.00 41.11 4.96
670 915 1.078955 CCTTGATGGGCTGGGGATAT 58.921 55.000 0.00 0.00 0.00 1.63
673 918 1.067295 TGATGGGCTGGGGATATCAC 58.933 55.000 4.83 0.00 0.00 3.06
688 933 5.941788 GGATATCACAGTCCCTTTAACCAT 58.058 41.667 4.83 0.00 0.00 3.55
689 934 7.074653 GGATATCACAGTCCCTTTAACCATA 57.925 40.000 4.83 0.00 0.00 2.74
698 943 5.014202 GTCCCTTTAACCATACAACCACAT 58.986 41.667 0.00 0.00 0.00 3.21
699 944 5.013547 TCCCTTTAACCATACAACCACATG 58.986 41.667 0.00 0.00 0.00 3.21
727 972 6.254804 GGTTCGCATGTTAAAAGAAAAGTTGT 59.745 34.615 0.00 0.00 0.00 3.32
1158 1418 4.468689 GCGGTAGTGGTGGCCCTC 62.469 72.222 0.00 0.00 0.00 4.30
1193 1453 3.802948 TGAATCGGAGGCTAGAGAAAC 57.197 47.619 0.00 0.00 0.00 2.78
1214 1474 1.822186 CGATTTTGCCGGGGTAGGG 60.822 63.158 2.18 0.00 0.00 3.53
1246 1507 1.620822 GGTGGCTGTTGATTGGACTT 58.379 50.000 0.00 0.00 0.00 3.01
1387 1648 1.985159 TCTTGTAGCAACCCATGGAGT 59.015 47.619 15.22 6.69 0.00 3.85
1411 1672 5.281727 TCACGAGATGTAAATCTTCCATCG 58.718 41.667 0.00 0.00 39.89 3.84
1448 1709 9.722184 CATCAGATCCACAAGTAATTATCAGAT 57.278 33.333 0.00 0.00 0.00 2.90
1505 1776 6.971726 AGAAGGAAAAATCCCGTTAAAAGT 57.028 33.333 0.00 0.00 0.00 2.66
1560 1831 1.532868 ACAATGAGAGCGTTTGTGAGC 59.467 47.619 0.00 0.00 0.00 4.26
1801 2073 2.741985 CATCGTCAAGGTGCCGCA 60.742 61.111 0.00 0.00 0.00 5.69
1881 2153 4.453136 TGTGGTTAAGAGACGGTTAAATGC 59.547 41.667 0.00 0.00 0.00 3.56
1897 2169 6.788930 GGTTAAATGCGCTCACGTATATAAAC 59.211 38.462 9.73 0.00 44.26 2.01
2039 2311 6.071952 AGGAAACATGGTAAGTGCTTGTTATG 60.072 38.462 0.00 0.00 30.76 1.90
2040 2312 6.294508 GGAAACATGGTAAGTGCTTGTTATGT 60.295 38.462 0.00 0.00 30.76 2.29
2364 2636 3.569701 CCATTATCATTGTAGCGGCCTTT 59.430 43.478 0.00 0.00 0.00 3.11
2402 2674 7.394077 TGTGAATCACATGGACAGTTATTCATT 59.606 33.333 12.63 0.00 39.99 2.57
2411 2683 4.638865 GGACAGTTATTCATTACCCCACAC 59.361 45.833 0.00 0.00 0.00 3.82
2438 3405 8.290277 CCCTATCCCTAATTAGCCTTAGATCTA 58.710 40.741 6.99 0.00 31.58 1.98
2449 3416 9.829507 ATTAGCCTTAGATCTATAACATGCATC 57.170 33.333 2.58 0.00 0.00 3.91
2577 3544 6.316640 TCAATTCTTCCTCTCACTAGTCTACG 59.683 42.308 0.00 0.00 0.00 3.51
2599 3566 5.301805 ACGTCATGGAATTTTGTTCCTTCTT 59.698 36.000 8.17 0.00 39.31 2.52
2803 3772 4.657436 ACATCTCGGTCCTATCAACTTC 57.343 45.455 0.00 0.00 0.00 3.01
2869 3838 7.333174 TGTTCTCGAGCAACATAATGTTCATTA 59.667 33.333 19.73 7.55 38.77 1.90
2873 3842 5.682862 CGAGCAACATAATGTTCATTAAGGC 59.317 40.000 8.92 9.72 38.77 4.35
2882 3851 9.421806 CATAATGTTCATTAAGGCTTTCAAACA 57.578 29.630 4.45 11.66 0.00 2.83
2890 3859 9.691362 TCATTAAGGCTTTCAAACATTAAGAAC 57.309 29.630 4.45 0.00 0.00 3.01
2891 3860 9.696917 CATTAAGGCTTTCAAACATTAAGAACT 57.303 29.630 4.45 0.00 0.00 3.01
2904 3873 1.053424 AAGAACTAGAACACCCCGCA 58.947 50.000 0.00 0.00 0.00 5.69
2920 3889 1.659794 GCACGTTGCTGTGGGATTT 59.340 52.632 6.47 0.00 40.96 2.17
2924 3893 1.608590 ACGTTGCTGTGGGATTTTCTG 59.391 47.619 0.00 0.00 0.00 3.02
2970 3940 6.249260 GCTGATACATAAAGCAAAGTGAAACG 59.751 38.462 0.00 0.00 38.31 3.60
2980 3950 0.107410 AAGTGAAACGGTGCACTCCA 60.107 50.000 16.27 5.05 44.06 3.86
3004 3974 2.862512 CATGGCAACGGTGTATTCAAC 58.137 47.619 0.66 0.00 42.51 3.18
3023 3993 3.703001 ACCACGAGAAATCCTGAATGT 57.297 42.857 0.00 0.00 0.00 2.71
3101 4071 7.756395 AAGCTAAGCTATATTGTGCATCATT 57.244 32.000 0.00 0.00 38.25 2.57
3171 4141 6.363577 TGTGTCAGAAAACAGAATGAACTC 57.636 37.500 0.00 0.00 39.69 3.01
3205 4175 7.510675 ACCTAGATTCAGAAATTGGAAGGTA 57.489 36.000 0.00 0.00 0.00 3.08
3229 4199 4.605640 AACAAATTGCCTGTGTAAGCAT 57.394 36.364 0.00 0.00 39.11 3.79
3261 4231 1.202203 TAGGTAAATTAGTGCGCGCG 58.798 50.000 28.44 28.44 0.00 6.86
3280 4252 1.554392 GCACACACATGCAAAAACGA 58.446 45.000 0.00 0.00 45.39 3.85
3281 4253 2.126467 GCACACACATGCAAAAACGAT 58.874 42.857 0.00 0.00 45.39 3.73
3282 4254 3.304257 GCACACACATGCAAAAACGATA 58.696 40.909 0.00 0.00 45.39 2.92
3283 4255 3.361644 GCACACACATGCAAAAACGATAG 59.638 43.478 0.00 0.00 45.39 2.08
3312 4285 2.405892 AGTTCATTGTGTTTCGCTGC 57.594 45.000 0.00 0.00 0.00 5.25
3314 4287 2.294233 AGTTCATTGTGTTTCGCTGCAT 59.706 40.909 0.00 0.00 0.00 3.96
3353 4326 0.689055 TCACAGGCTGCACTTGAGAT 59.311 50.000 15.89 0.00 0.00 2.75
3366 4339 4.776743 CACTTGAGATGAAACTTCGTTGG 58.223 43.478 0.00 0.00 0.00 3.77
3367 4340 3.251004 ACTTGAGATGAAACTTCGTTGGC 59.749 43.478 0.00 0.00 0.00 4.52
3368 4341 2.844946 TGAGATGAAACTTCGTTGGCA 58.155 42.857 0.00 0.00 0.00 4.92
3369 4342 3.210227 TGAGATGAAACTTCGTTGGCAA 58.790 40.909 0.00 0.00 0.00 4.52
3374 4347 2.053627 GAAACTTCGTTGGCAATGCAG 58.946 47.619 16.01 16.01 0.00 4.41
3438 4414 1.681264 AGCAAAAGGAAAGAACACCCG 59.319 47.619 0.00 0.00 0.00 5.28
3444 4420 0.747852 GGAAAGAACACCCGCCAAAA 59.252 50.000 0.00 0.00 0.00 2.44
3509 4485 4.520874 AGAGTTTCTGACTTCATGAGACGA 59.479 41.667 0.00 0.00 39.19 4.20
3519 4495 1.067060 TCATGAGACGAGCATAACCGG 59.933 52.381 0.00 0.00 0.00 5.28
3536 4512 7.661968 CATAACCGGATTAGAGAGAAAGATGA 58.338 38.462 9.46 0.00 0.00 2.92
3540 4516 5.475220 CCGGATTAGAGAGAAAGATGAGCTA 59.525 44.000 0.00 0.00 0.00 3.32
3541 4517 6.152661 CCGGATTAGAGAGAAAGATGAGCTAT 59.847 42.308 0.00 0.00 0.00 2.97
3542 4518 7.028962 CGGATTAGAGAGAAAGATGAGCTATG 58.971 42.308 0.00 0.00 0.00 2.23
3543 4519 6.813152 GGATTAGAGAGAAAGATGAGCTATGC 59.187 42.308 0.00 0.00 0.00 3.14
3544 4520 6.975196 TTAGAGAGAAAGATGAGCTATGCT 57.025 37.500 0.00 0.00 43.88 3.79
3556 4532 0.390472 GCTATGCTCCGATGCCTACC 60.390 60.000 0.00 0.00 0.00 3.18
3562 4538 2.076622 CTCCGATGCCTACCTGGTCG 62.077 65.000 0.63 0.00 38.35 4.79
3564 4540 2.900273 GATGCCTACCTGGTCGCA 59.100 61.111 19.99 19.99 38.35 5.10
3608 5453 9.189156 TCAGATTGAATCCCAAAAGTTAATAGG 57.811 33.333 0.75 0.00 38.43 2.57
3616 5461 6.958767 TCCCAAAAGTTAATAGGAGAAGAGG 58.041 40.000 0.00 0.00 0.00 3.69
3617 5462 6.733807 TCCCAAAAGTTAATAGGAGAAGAGGA 59.266 38.462 0.00 0.00 0.00 3.71
3620 5465 7.500559 CCAAAAGTTAATAGGAGAAGAGGATGG 59.499 40.741 0.00 0.00 0.00 3.51
3644 5489 1.500474 TCTGCACCTAGAAGATGGGG 58.500 55.000 0.00 0.00 32.60 4.96
3661 5506 1.065418 GGGGATGTCGTTTGTGATCCT 60.065 52.381 0.00 0.00 35.61 3.24
3711 5559 2.685897 TGCCGATTGGTTACTAATTGCC 59.314 45.455 11.86 0.08 37.67 4.52
3723 5571 7.502895 TGGTTACTAATTGCCACAGACTAAAAA 59.497 33.333 0.00 0.00 0.00 1.94
3725 5573 6.575162 ACTAATTGCCACAGACTAAAAAGG 57.425 37.500 0.00 0.00 0.00 3.11
3730 5578 3.634910 TGCCACAGACTAAAAAGGAAACC 59.365 43.478 0.00 0.00 0.00 3.27
3744 5592 1.443802 GAAACCGAAGAGGCAGAAGG 58.556 55.000 0.00 0.00 46.52 3.46
3750 5598 1.827681 GAAGAGGCAGAAGGGGAAAC 58.172 55.000 0.00 0.00 0.00 2.78
3774 6893 7.743104 ACAAACTAATTAGAATCGAGCAACTG 58.257 34.615 19.38 3.38 0.00 3.16
3791 6910 2.973945 ACTGTCTTAGGAATTGGACGC 58.026 47.619 0.00 0.00 0.00 5.19
3792 6911 1.927174 CTGTCTTAGGAATTGGACGCG 59.073 52.381 3.53 3.53 0.00 6.01
3793 6912 1.287425 GTCTTAGGAATTGGACGCGG 58.713 55.000 12.47 0.00 0.00 6.46
3794 6913 0.177141 TCTTAGGAATTGGACGCGGG 59.823 55.000 12.47 0.00 0.00 6.13
3801 6920 0.322997 AATTGGACGCGGGGATTTGA 60.323 50.000 12.47 0.00 0.00 2.69
3814 6933 6.149633 GCGGGGATTTGATTGATAATACAAC 58.850 40.000 0.00 0.00 32.50 3.32
3816 6935 6.264292 CGGGGATTTGATTGATAATACAACCA 59.736 38.462 0.00 0.00 32.50 3.67
3827 6946 2.561478 ATACAACCAAACGGCTCAGT 57.439 45.000 0.00 0.00 0.00 3.41
3840 6959 2.223377 CGGCTCAGTTTTAACAGGTGAC 59.777 50.000 0.00 0.00 0.00 3.67
3848 6967 1.416243 TTAACAGGTGACGTGGAGGT 58.584 50.000 10.23 0.00 0.00 3.85
3851 6970 1.290324 CAGGTGACGTGGAGGTCTG 59.710 63.158 0.00 0.00 37.81 3.51
3873 6992 7.692291 GTCTGTGTACAAAATGCATGTATACAC 59.308 37.037 24.71 24.71 44.86 2.90
3900 7019 3.384789 AGAATTGCTGACGTGGCTAGATA 59.615 43.478 0.00 0.00 0.00 1.98
3911 7030 4.240888 CGTGGCTAGATAATGATGTGGAG 58.759 47.826 0.00 0.00 0.00 3.86
3915 7034 3.620966 GCTAGATAATGATGTGGAGGGGC 60.621 52.174 0.00 0.00 0.00 5.80
3928 7047 0.322816 GAGGGGCTGCATGTTGAGAA 60.323 55.000 0.50 0.00 0.00 2.87
3938 7057 5.021033 TGCATGTTGAGAAAATTGGTTGT 57.979 34.783 0.00 0.00 0.00 3.32
3939 7058 6.154203 TGCATGTTGAGAAAATTGGTTGTA 57.846 33.333 0.00 0.00 0.00 2.41
3984 7103 9.793252 AGAATGTAAGATTCAATTTCATTTCCG 57.207 29.630 0.00 0.00 0.00 4.30
4158 7278 3.811722 TTCAAGCTTATGCACACTTCG 57.188 42.857 0.00 0.00 42.74 3.79
4159 7279 2.076100 TCAAGCTTATGCACACTTCGG 58.924 47.619 0.00 0.00 42.74 4.30
4189 7309 6.608405 TGGTCATAGAGGTTAACCGAGATTTA 59.392 38.462 18.91 7.04 42.08 1.40
4206 7326 1.863155 TTAGGGAAGCCAGGGCAAGG 61.863 60.000 13.63 0.00 44.88 3.61
4221 7342 2.093235 GGCAAGGAATAGCAGAGAGTGT 60.093 50.000 0.00 0.00 0.00 3.55
4307 7428 3.307762 GGAATAACAGAGGGTGTGCTTCT 60.308 47.826 0.00 0.00 40.26 2.85
4326 7447 5.703876 CTTCTCAACCAACAAGAAATAGCC 58.296 41.667 0.00 0.00 0.00 3.93
4346 7477 6.472686 AGCCGAAAATAGACTCAGTTATCT 57.527 37.500 0.00 0.00 0.00 1.98
4525 7656 8.865001 TGAAATATTTTAAAAGCATTACGTGGC 58.135 29.630 6.79 0.00 0.00 5.01
4536 7668 3.855154 GCATTACGTGGCATTTTGTGTCA 60.855 43.478 0.00 0.00 40.91 3.58
4731 9124 7.556275 CCTTTTCAATTGAGTAATAGCCCTACA 59.444 37.037 8.41 0.00 0.00 2.74
4774 9167 4.870221 AATACAGTTATCGTTTTCCCGC 57.130 40.909 0.00 0.00 0.00 6.13
4775 9168 2.172851 ACAGTTATCGTTTTCCCGCA 57.827 45.000 0.00 0.00 0.00 5.69
4776 9169 2.073816 ACAGTTATCGTTTTCCCGCAG 58.926 47.619 0.00 0.00 0.00 5.18
4777 9170 2.289195 ACAGTTATCGTTTTCCCGCAGA 60.289 45.455 0.00 0.00 0.00 4.26
4804 9197 7.661437 TCTGGATGGAATAAATATTCGGACAAG 59.339 37.037 6.99 4.55 42.25 3.16
4817 9210 1.847328 GGACAAGGGGGTGTAATTGG 58.153 55.000 0.00 0.00 0.00 3.16
4822 9215 1.308877 AGGGGGTGTAATTGGCTGAT 58.691 50.000 0.00 0.00 0.00 2.90
4980 9376 0.604578 TTCCCGGAACCTACTTCGTG 59.395 55.000 0.73 0.00 0.00 4.35
5034 9430 5.710099 GGTCTTATGGGATTGTTCTGTTTGA 59.290 40.000 0.00 0.00 0.00 2.69
5137 9533 6.765915 AGATGCCTAGAAGATTTGGTTTTC 57.234 37.500 0.00 0.00 0.00 2.29
5145 9541 8.742777 CCTAGAAGATTTGGTTTTCATTCATCA 58.257 33.333 0.00 0.00 0.00 3.07
5200 9596 6.834168 TTCTGATATTTCCTTTGTGGTTCC 57.166 37.500 0.00 0.00 37.07 3.62
5211 9607 0.770499 TGTGGTTCCCATCTTCTGCA 59.230 50.000 0.00 0.00 35.28 4.41
5237 9633 0.685097 TGTAGACAGCCCTGGTCAAC 59.315 55.000 0.00 0.00 37.74 3.18
5542 9951 4.036027 CCCTGTTCAAGAATTCATCCGATG 59.964 45.833 8.44 1.55 0.00 3.84
5543 9952 4.877823 CCTGTTCAAGAATTCATCCGATGA 59.122 41.667 7.00 7.00 37.55 2.92
5544 9953 5.530171 CCTGTTCAAGAATTCATCCGATGAT 59.470 40.000 11.90 0.00 39.39 2.45
5549 9958 7.496529 TCAAGAATTCATCCGATGATTAACC 57.503 36.000 11.90 3.04 39.39 2.85
5550 9959 6.486657 TCAAGAATTCATCCGATGATTAACCC 59.513 38.462 11.90 0.14 39.39 4.11
5574 9983 2.622064 ACTTGCCGATTCATCCCTAC 57.378 50.000 0.00 0.00 0.00 3.18
5576 9985 2.505819 ACTTGCCGATTCATCCCTACTT 59.494 45.455 0.00 0.00 0.00 2.24
5595 10004 0.038599 TGTAGGGTCACCGAGTAGCA 59.961 55.000 0.00 0.00 43.47 3.49
5606 10015 6.327934 GTCACCGAGTAGCAGATAAACTTTA 58.672 40.000 0.00 0.00 0.00 1.85
5607 10016 6.979238 GTCACCGAGTAGCAGATAAACTTTAT 59.021 38.462 0.00 0.00 0.00 1.40
5608 10017 7.167801 GTCACCGAGTAGCAGATAAACTTTATC 59.832 40.741 12.07 12.07 0.00 1.75
5609 10018 6.142480 CACCGAGTAGCAGATAAACTTTATCG 59.858 42.308 13.55 10.55 0.00 2.92
5610 10019 6.183360 ACCGAGTAGCAGATAAACTTTATCGT 60.183 38.462 13.55 7.30 0.00 3.73
5611 10020 6.360148 CCGAGTAGCAGATAAACTTTATCGTC 59.640 42.308 13.55 10.23 0.00 4.20
5612 10021 6.360148 CGAGTAGCAGATAAACTTTATCGTCC 59.640 42.308 13.55 7.86 0.00 4.79
5613 10022 7.108841 AGTAGCAGATAAACTTTATCGTCCA 57.891 36.000 13.55 2.08 0.00 4.02
5614 10023 7.553334 AGTAGCAGATAAACTTTATCGTCCAA 58.447 34.615 13.55 1.27 0.00 3.53
5615 10024 8.204836 AGTAGCAGATAAACTTTATCGTCCAAT 58.795 33.333 13.55 4.11 0.00 3.16
5616 10025 7.865706 AGCAGATAAACTTTATCGTCCAATT 57.134 32.000 13.55 0.00 0.00 2.32
5617 10026 8.958119 AGCAGATAAACTTTATCGTCCAATTA 57.042 30.769 13.55 0.00 0.00 1.40
5618 10027 9.391006 AGCAGATAAACTTTATCGTCCAATTAA 57.609 29.630 13.55 0.00 0.00 1.40
5633 10042 9.299963 TCGTCCAATTAATTGATTAAATTGCTG 57.700 29.630 26.32 7.79 38.93 4.41
5634 10043 9.299963 CGTCCAATTAATTGATTAAATTGCTGA 57.700 29.630 26.32 9.77 38.93 4.26
5645 10054 8.129161 TGATTAAATTGCTGATTAATTTGCCG 57.871 30.769 9.95 0.00 38.01 5.69
5646 10055 7.978414 TGATTAAATTGCTGATTAATTTGCCGA 59.022 29.630 9.95 2.05 38.01 5.54
5647 10056 8.891671 ATTAAATTGCTGATTAATTTGCCGAT 57.108 26.923 9.95 3.77 38.01 4.18
5648 10057 8.715191 TTAAATTGCTGATTAATTTGCCGATT 57.285 26.923 9.95 8.04 38.01 3.34
5649 10058 9.809096 TTAAATTGCTGATTAATTTGCCGATTA 57.191 25.926 9.95 5.31 38.01 1.75
5650 10059 7.935338 AATTGCTGATTAATTTGCCGATTAG 57.065 32.000 9.95 0.00 0.00 1.73
5651 10060 4.858935 TGCTGATTAATTTGCCGATTAGC 58.141 39.130 9.95 0.00 33.31 3.09
5652 10061 4.580167 TGCTGATTAATTTGCCGATTAGCT 59.420 37.500 9.95 0.00 33.71 3.32
5653 10062 5.067674 TGCTGATTAATTTGCCGATTAGCTT 59.932 36.000 0.00 0.00 33.71 3.74
5654 10063 6.262049 TGCTGATTAATTTGCCGATTAGCTTA 59.738 34.615 0.00 0.00 33.71 3.09
5655 10064 7.040478 TGCTGATTAATTTGCCGATTAGCTTAT 60.040 33.333 0.00 0.00 33.71 1.73
5656 10065 7.809806 GCTGATTAATTTGCCGATTAGCTTATT 59.190 33.333 0.00 0.00 30.95 1.40
5662 10071 6.569179 TTTGCCGATTAGCTTATTAATCCC 57.431 37.500 0.00 0.00 36.93 3.85
5663 10072 4.585879 TGCCGATTAGCTTATTAATCCCC 58.414 43.478 0.00 0.00 36.93 4.81
5664 10073 4.288626 TGCCGATTAGCTTATTAATCCCCT 59.711 41.667 0.00 0.00 36.93 4.79
5665 10074 5.486063 TGCCGATTAGCTTATTAATCCCCTA 59.514 40.000 0.00 0.00 36.93 3.53
5666 10075 5.816258 GCCGATTAGCTTATTAATCCCCTAC 59.184 44.000 0.00 0.00 36.93 3.18
5667 10076 6.351966 GCCGATTAGCTTATTAATCCCCTACT 60.352 42.308 0.00 0.00 36.93 2.57
5668 10077 7.266400 CCGATTAGCTTATTAATCCCCTACTC 58.734 42.308 0.00 0.00 36.93 2.59
5669 10078 6.973474 CGATTAGCTTATTAATCCCCTACTCG 59.027 42.308 0.00 3.50 36.93 4.18
5670 10079 4.538746 AGCTTATTAATCCCCTACTCGC 57.461 45.455 0.00 0.00 0.00 5.03
5671 10080 3.261137 AGCTTATTAATCCCCTACTCGCC 59.739 47.826 0.00 0.00 0.00 5.54
5672 10081 3.007614 GCTTATTAATCCCCTACTCGCCA 59.992 47.826 0.00 0.00 0.00 5.69
5673 10082 4.822026 CTTATTAATCCCCTACTCGCCAG 58.178 47.826 0.00 0.00 0.00 4.85
5674 10083 0.756903 TTAATCCCCTACTCGCCAGC 59.243 55.000 0.00 0.00 0.00 4.85
5675 10084 1.119574 TAATCCCCTACTCGCCAGCC 61.120 60.000 0.00 0.00 0.00 4.85
5676 10085 3.696518 ATCCCCTACTCGCCAGCCA 62.697 63.158 0.00 0.00 0.00 4.75
5677 10086 3.399181 CCCCTACTCGCCAGCCAA 61.399 66.667 0.00 0.00 0.00 4.52
5678 10087 2.125106 CCCTACTCGCCAGCCAAC 60.125 66.667 0.00 0.00 0.00 3.77
5679 10088 2.125106 CCTACTCGCCAGCCAACC 60.125 66.667 0.00 0.00 0.00 3.77
5680 10089 2.509336 CTACTCGCCAGCCAACCG 60.509 66.667 0.00 0.00 0.00 4.44
5681 10090 2.992689 TACTCGCCAGCCAACCGA 60.993 61.111 0.00 0.00 0.00 4.69
5687 10096 4.711949 CCAGCCAACCGAGCAGCT 62.712 66.667 0.00 0.00 35.52 4.24
5688 10097 2.265739 CAGCCAACCGAGCAGCTA 59.734 61.111 0.00 0.00 33.33 3.32
5689 10098 2.103042 CAGCCAACCGAGCAGCTAC 61.103 63.158 0.00 0.00 33.33 3.58
5690 10099 2.820037 GCCAACCGAGCAGCTACC 60.820 66.667 0.00 0.00 0.00 3.18
5691 10100 2.662596 CCAACCGAGCAGCTACCA 59.337 61.111 0.00 0.00 0.00 3.25
5692 10101 1.448540 CCAACCGAGCAGCTACCAG 60.449 63.158 0.00 0.00 0.00 4.00
5693 10102 1.293498 CAACCGAGCAGCTACCAGT 59.707 57.895 0.00 0.00 0.00 4.00
5694 10103 0.320771 CAACCGAGCAGCTACCAGTT 60.321 55.000 0.00 0.00 0.00 3.16
5695 10104 1.067142 CAACCGAGCAGCTACCAGTTA 60.067 52.381 0.00 0.00 0.00 2.24
5696 10105 0.818296 ACCGAGCAGCTACCAGTTAG 59.182 55.000 0.00 0.00 0.00 2.34
5706 10115 4.780546 GCTACCAGTTAGCGATTTCTTC 57.219 45.455 0.00 0.00 43.99 2.87
5707 10116 4.181578 GCTACCAGTTAGCGATTTCTTCA 58.818 43.478 0.00 0.00 43.99 3.02
5708 10117 4.630069 GCTACCAGTTAGCGATTTCTTCAA 59.370 41.667 0.00 0.00 43.99 2.69
5709 10118 5.446073 GCTACCAGTTAGCGATTTCTTCAAC 60.446 44.000 0.00 0.00 43.99 3.18
5710 10119 4.385825 ACCAGTTAGCGATTTCTTCAACA 58.614 39.130 0.00 0.00 0.00 3.33
5711 10120 4.819630 ACCAGTTAGCGATTTCTTCAACAA 59.180 37.500 0.00 0.00 0.00 2.83
5712 10121 5.473504 ACCAGTTAGCGATTTCTTCAACAAT 59.526 36.000 0.00 0.00 0.00 2.71
5713 10122 5.796935 CCAGTTAGCGATTTCTTCAACAATG 59.203 40.000 0.00 0.00 0.00 2.82
5714 10123 5.284660 CAGTTAGCGATTTCTTCAACAATGC 59.715 40.000 0.00 0.00 0.00 3.56
5715 10124 3.921119 AGCGATTTCTTCAACAATGCA 57.079 38.095 0.00 0.00 0.00 3.96
5716 10125 4.241590 AGCGATTTCTTCAACAATGCAA 57.758 36.364 0.00 0.00 0.00 4.08
5717 10126 4.619973 AGCGATTTCTTCAACAATGCAAA 58.380 34.783 0.00 0.00 0.00 3.68
5718 10127 5.049167 AGCGATTTCTTCAACAATGCAAAA 58.951 33.333 0.00 0.00 0.00 2.44
5719 10128 5.697633 AGCGATTTCTTCAACAATGCAAAAT 59.302 32.000 0.00 0.00 0.00 1.82
5720 10129 6.867816 AGCGATTTCTTCAACAATGCAAAATA 59.132 30.769 0.00 0.00 0.00 1.40
5721 10130 7.546667 AGCGATTTCTTCAACAATGCAAAATAT 59.453 29.630 0.00 0.00 0.00 1.28
5899 10318 3.616076 CGATCCTTGCTCACACTCTCTTT 60.616 47.826 0.00 0.00 0.00 2.52
5912 10331 8.740123 TCACACTCTCTTTGTGGTATTTTAAA 57.260 30.769 2.82 0.00 43.88 1.52
5914 10333 9.965824 CACACTCTCTTTGTGGTATTTTAAATT 57.034 29.630 0.00 0.00 40.66 1.82
5955 10374 9.801873 TTTTTGTCTCTCAATTTCTTCGAAAAT 57.198 25.926 0.00 0.00 35.84 1.82
5969 10388 8.446599 TTCTTCGAAAATATAGAAATGGTCCC 57.553 34.615 0.00 0.00 0.00 4.46
5970 10389 7.802117 TCTTCGAAAATATAGAAATGGTCCCT 58.198 34.615 0.00 0.00 0.00 4.20
5971 10390 7.931948 TCTTCGAAAATATAGAAATGGTCCCTC 59.068 37.037 0.00 0.00 0.00 4.30
5972 10391 7.131907 TCGAAAATATAGAAATGGTCCCTCA 57.868 36.000 0.00 0.00 0.00 3.86
5973 10392 7.570132 TCGAAAATATAGAAATGGTCCCTCAA 58.430 34.615 0.00 0.00 0.00 3.02
5974 10393 7.497909 TCGAAAATATAGAAATGGTCCCTCAAC 59.502 37.037 0.00 0.00 0.00 3.18
5975 10394 7.499232 CGAAAATATAGAAATGGTCCCTCAACT 59.501 37.037 0.00 0.00 0.00 3.16
5976 10395 8.753497 AAAATATAGAAATGGTCCCTCAACTC 57.247 34.615 0.00 0.00 0.00 3.01
5977 10396 4.779993 ATAGAAATGGTCCCTCAACTCC 57.220 45.455 0.00 0.00 0.00 3.85
5978 10397 2.348472 AGAAATGGTCCCTCAACTCCA 58.652 47.619 0.00 0.00 0.00 3.86
5979 10398 2.716424 AGAAATGGTCCCTCAACTCCAA 59.284 45.455 0.00 0.00 33.55 3.53
5980 10399 3.140144 AGAAATGGTCCCTCAACTCCAAA 59.860 43.478 0.00 0.00 33.55 3.28
5981 10400 3.611025 AATGGTCCCTCAACTCCAAAA 57.389 42.857 0.00 0.00 33.55 2.44
5982 10401 2.358322 TGGTCCCTCAACTCCAAAAC 57.642 50.000 0.00 0.00 0.00 2.43
5983 10402 1.133606 TGGTCCCTCAACTCCAAAACC 60.134 52.381 0.00 0.00 0.00 3.27
5984 10403 1.133606 GGTCCCTCAACTCCAAAACCA 60.134 52.381 0.00 0.00 0.00 3.67
5985 10404 2.230660 GTCCCTCAACTCCAAAACCAG 58.769 52.381 0.00 0.00 0.00 4.00
5986 10405 0.961753 CCCTCAACTCCAAAACCAGC 59.038 55.000 0.00 0.00 0.00 4.85
5987 10406 1.691196 CCTCAACTCCAAAACCAGCA 58.309 50.000 0.00 0.00 0.00 4.41
5988 10407 2.031120 CCTCAACTCCAAAACCAGCAA 58.969 47.619 0.00 0.00 0.00 3.91
5989 10408 2.430332 CCTCAACTCCAAAACCAGCAAA 59.570 45.455 0.00 0.00 0.00 3.68
5990 10409 3.447742 CTCAACTCCAAAACCAGCAAAC 58.552 45.455 0.00 0.00 0.00 2.93
5991 10410 3.096092 TCAACTCCAAAACCAGCAAACT 58.904 40.909 0.00 0.00 0.00 2.66
5992 10411 3.119173 TCAACTCCAAAACCAGCAAACTG 60.119 43.478 0.00 0.00 44.05 3.16
5993 10412 2.456577 ACTCCAAAACCAGCAAACTGT 58.543 42.857 0.00 0.00 42.81 3.55
5994 10413 3.626930 ACTCCAAAACCAGCAAACTGTA 58.373 40.909 0.00 0.00 42.81 2.74
5995 10414 3.632145 ACTCCAAAACCAGCAAACTGTAG 59.368 43.478 0.00 0.00 42.81 2.74
5996 10415 3.626930 TCCAAAACCAGCAAACTGTAGT 58.373 40.909 0.00 0.00 42.81 2.73
5997 10416 3.630312 TCCAAAACCAGCAAACTGTAGTC 59.370 43.478 0.00 0.00 42.81 2.59
5998 10417 3.243401 CCAAAACCAGCAAACTGTAGTCC 60.243 47.826 0.00 0.00 42.81 3.85
5999 10418 2.271944 AACCAGCAAACTGTAGTCCC 57.728 50.000 0.00 0.00 42.81 4.46
6000 10419 1.435256 ACCAGCAAACTGTAGTCCCT 58.565 50.000 0.00 0.00 42.81 4.20
6001 10420 1.348036 ACCAGCAAACTGTAGTCCCTC 59.652 52.381 0.00 0.00 42.81 4.30
6002 10421 1.347707 CCAGCAAACTGTAGTCCCTCA 59.652 52.381 0.00 0.00 42.81 3.86
6003 10422 2.224523 CCAGCAAACTGTAGTCCCTCAA 60.225 50.000 0.00 0.00 42.81 3.02
6004 10423 3.560025 CCAGCAAACTGTAGTCCCTCAAT 60.560 47.826 0.00 0.00 42.81 2.57
6005 10424 4.074970 CAGCAAACTGTAGTCCCTCAATT 58.925 43.478 0.00 0.00 39.22 2.32
6006 10425 4.520492 CAGCAAACTGTAGTCCCTCAATTT 59.480 41.667 0.00 0.00 39.22 1.82
6007 10426 5.010012 CAGCAAACTGTAGTCCCTCAATTTT 59.990 40.000 0.00 0.00 39.22 1.82
6008 10427 5.598417 AGCAAACTGTAGTCCCTCAATTTTT 59.402 36.000 0.00 0.00 0.00 1.94
6009 10428 6.775629 AGCAAACTGTAGTCCCTCAATTTTTA 59.224 34.615 0.00 0.00 0.00 1.52
6010 10429 7.286775 AGCAAACTGTAGTCCCTCAATTTTTAA 59.713 33.333 0.00 0.00 0.00 1.52
6011 10430 7.923878 GCAAACTGTAGTCCCTCAATTTTTAAA 59.076 33.333 0.00 0.00 0.00 1.52
6012 10431 9.810545 CAAACTGTAGTCCCTCAATTTTTAAAA 57.189 29.630 0.00 0.00 0.00 1.52
6013 10432 9.811995 AAACTGTAGTCCCTCAATTTTTAAAAC 57.188 29.630 0.00 0.00 0.00 2.43
6014 10433 7.948357 ACTGTAGTCCCTCAATTTTTAAAACC 58.052 34.615 0.00 0.00 0.00 3.27
6015 10434 6.972722 TGTAGTCCCTCAATTTTTAAAACCG 58.027 36.000 0.00 0.00 0.00 4.44
6016 10435 5.462530 AGTCCCTCAATTTTTAAAACCGG 57.537 39.130 0.00 0.00 0.00 5.28
6017 10436 5.141910 AGTCCCTCAATTTTTAAAACCGGA 58.858 37.500 9.46 0.00 0.00 5.14
6018 10437 5.778241 AGTCCCTCAATTTTTAAAACCGGAT 59.222 36.000 9.46 0.00 0.00 4.18
6019 10438 6.949463 AGTCCCTCAATTTTTAAAACCGGATA 59.051 34.615 9.46 0.00 0.00 2.59
6020 10439 7.452189 AGTCCCTCAATTTTTAAAACCGGATAA 59.548 33.333 9.46 1.24 0.00 1.75
6021 10440 7.758076 GTCCCTCAATTTTTAAAACCGGATAAG 59.242 37.037 9.46 0.00 0.00 1.73
6022 10441 7.452189 TCCCTCAATTTTTAAAACCGGATAAGT 59.548 33.333 9.46 0.00 0.00 2.24
6023 10442 8.092068 CCCTCAATTTTTAAAACCGGATAAGTT 58.908 33.333 9.46 0.00 0.00 2.66
6024 10443 9.483916 CCTCAATTTTTAAAACCGGATAAGTTT 57.516 29.630 9.46 2.76 39.07 2.66
6030 10449 7.686438 TTTAAAACCGGATAAGTTTAGTCCC 57.314 36.000 9.46 0.00 36.44 4.46
6031 10450 5.509832 AAAACCGGATAAGTTTAGTCCCT 57.490 39.130 9.46 0.00 36.44 4.20
6032 10451 4.750021 AACCGGATAAGTTTAGTCCCTC 57.250 45.455 9.46 0.00 0.00 4.30
6033 10452 3.716431 ACCGGATAAGTTTAGTCCCTCA 58.284 45.455 9.46 0.00 0.00 3.86
6034 10453 4.296056 ACCGGATAAGTTTAGTCCCTCAT 58.704 43.478 9.46 0.00 0.00 2.90
6035 10454 5.461327 ACCGGATAAGTTTAGTCCCTCATA 58.539 41.667 9.46 0.00 0.00 2.15
6036 10455 5.303845 ACCGGATAAGTTTAGTCCCTCATAC 59.696 44.000 9.46 0.00 0.00 2.39
6037 10456 5.279356 CCGGATAAGTTTAGTCCCTCATACC 60.279 48.000 0.00 0.00 0.00 2.73
6038 10457 5.303589 CGGATAAGTTTAGTCCCTCATACCA 59.696 44.000 0.00 0.00 0.00 3.25
6039 10458 6.522946 GGATAAGTTTAGTCCCTCATACCAC 58.477 44.000 0.00 0.00 0.00 4.16
6040 10459 6.326843 GGATAAGTTTAGTCCCTCATACCACT 59.673 42.308 0.00 0.00 0.00 4.00
6041 10460 7.147532 GGATAAGTTTAGTCCCTCATACCACTT 60.148 40.741 0.00 0.00 0.00 3.16
6042 10461 6.449830 AAGTTTAGTCCCTCATACCACTTT 57.550 37.500 0.00 0.00 0.00 2.66
6043 10462 5.805728 AGTTTAGTCCCTCATACCACTTTG 58.194 41.667 0.00 0.00 0.00 2.77
6044 10463 4.837093 TTAGTCCCTCATACCACTTTGG 57.163 45.455 0.00 0.00 45.02 3.28
6069 10488 1.021202 TTTTTGCTGACGTGGACTGG 58.979 50.000 0.00 0.00 0.00 4.00
6070 10489 0.107410 TTTTGCTGACGTGGACTGGT 60.107 50.000 0.00 0.00 0.00 4.00
6071 10490 0.107410 TTTGCTGACGTGGACTGGTT 60.107 50.000 0.00 0.00 0.00 3.67
6072 10491 0.813610 TTGCTGACGTGGACTGGTTG 60.814 55.000 0.00 0.00 0.00 3.77
6073 10492 1.227556 GCTGACGTGGACTGGTTGT 60.228 57.895 0.00 0.00 0.00 3.32
6074 10493 0.814010 GCTGACGTGGACTGGTTGTT 60.814 55.000 0.00 0.00 0.00 2.83
6075 10494 0.937304 CTGACGTGGACTGGTTGTTG 59.063 55.000 0.00 0.00 0.00 3.33
6076 10495 0.250793 TGACGTGGACTGGTTGTTGT 59.749 50.000 0.00 0.00 0.00 3.32
6077 10496 1.339247 TGACGTGGACTGGTTGTTGTT 60.339 47.619 0.00 0.00 0.00 2.83
6078 10497 1.741145 GACGTGGACTGGTTGTTGTTT 59.259 47.619 0.00 0.00 0.00 2.83
6079 10498 1.470890 ACGTGGACTGGTTGTTGTTTG 59.529 47.619 0.00 0.00 0.00 2.93
6080 10499 1.202245 CGTGGACTGGTTGTTGTTTGG 60.202 52.381 0.00 0.00 0.00 3.28
6081 10500 2.096248 GTGGACTGGTTGTTGTTTGGA 58.904 47.619 0.00 0.00 0.00 3.53
6082 10501 2.494073 GTGGACTGGTTGTTGTTTGGAA 59.506 45.455 0.00 0.00 0.00 3.53
6083 10502 2.494073 TGGACTGGTTGTTGTTTGGAAC 59.506 45.455 0.00 0.00 0.00 3.62
6084 10503 2.758423 GGACTGGTTGTTGTTTGGAACT 59.242 45.455 0.00 0.00 0.00 3.01
6085 10504 3.428862 GGACTGGTTGTTGTTTGGAACTG 60.429 47.826 0.00 0.00 0.00 3.16
6086 10505 3.161866 ACTGGTTGTTGTTTGGAACTGT 58.838 40.909 0.00 0.00 0.00 3.55
6087 10506 3.056891 ACTGGTTGTTGTTTGGAACTGTG 60.057 43.478 0.00 0.00 0.00 3.66
6088 10507 2.232452 TGGTTGTTGTTTGGAACTGTGG 59.768 45.455 0.00 0.00 0.00 4.17
6089 10508 2.418060 GGTTGTTGTTTGGAACTGTGGG 60.418 50.000 0.00 0.00 0.00 4.61
6090 10509 2.494073 GTTGTTGTTTGGAACTGTGGGA 59.506 45.455 0.00 0.00 0.00 4.37
6091 10510 2.096248 TGTTGTTTGGAACTGTGGGAC 58.904 47.619 0.00 0.00 0.00 4.46
6092 10511 1.407618 GTTGTTTGGAACTGTGGGACC 59.592 52.381 0.00 0.00 0.00 4.46
6093 10512 0.626382 TGTTTGGAACTGTGGGACCA 59.374 50.000 0.00 0.00 0.00 4.02
6094 10513 1.318576 GTTTGGAACTGTGGGACCAG 58.681 55.000 0.00 0.00 38.45 4.00
6095 10514 0.467290 TTTGGAACTGTGGGACCAGC 60.467 55.000 0.00 0.00 35.83 4.85
6096 10515 2.034221 GGAACTGTGGGACCAGCC 59.966 66.667 0.00 0.00 35.83 4.85
6097 10516 2.529744 GGAACTGTGGGACCAGCCT 61.530 63.158 0.00 0.00 35.83 4.58
6098 10517 1.302832 GAACTGTGGGACCAGCCTG 60.303 63.158 0.00 0.00 35.83 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
174 175 6.101650 TCATCCATGTAAACTCTATCGCAT 57.898 37.500 0.00 0.00 0.00 4.73
410 419 1.394963 CTGGTACCCCTACCCACCT 59.605 63.158 10.07 0.00 41.92 4.00
596 841 2.803956 TCGGACTTCTCACACCATACT 58.196 47.619 0.00 0.00 0.00 2.12
597 842 3.056749 AGTTCGGACTTCTCACACCATAC 60.057 47.826 0.00 0.00 29.87 2.39
598 843 3.162666 AGTTCGGACTTCTCACACCATA 58.837 45.455 0.00 0.00 29.87 2.74
599 844 1.971357 AGTTCGGACTTCTCACACCAT 59.029 47.619 0.00 0.00 29.87 3.55
600 845 1.410004 AGTTCGGACTTCTCACACCA 58.590 50.000 0.00 0.00 29.87 4.17
601 846 2.528041 AAGTTCGGACTTCTCACACC 57.472 50.000 2.29 0.00 42.35 4.16
602 847 3.005578 ACCTAAGTTCGGACTTCTCACAC 59.994 47.826 13.67 0.00 44.75 3.82
603 848 3.228453 ACCTAAGTTCGGACTTCTCACA 58.772 45.455 13.67 0.00 44.75 3.58
604 849 3.506844 AGACCTAAGTTCGGACTTCTCAC 59.493 47.826 13.67 4.15 44.75 3.51
605 850 3.506455 CAGACCTAAGTTCGGACTTCTCA 59.494 47.826 13.67 0.00 44.75 3.27
606 851 3.119424 CCAGACCTAAGTTCGGACTTCTC 60.119 52.174 13.67 6.55 44.75 2.87
607 852 2.826725 CCAGACCTAAGTTCGGACTTCT 59.173 50.000 13.67 0.38 44.75 2.85
608 853 2.824341 TCCAGACCTAAGTTCGGACTTC 59.176 50.000 13.67 0.00 44.75 3.01
610 855 2.448453 CTCCAGACCTAAGTTCGGACT 58.552 52.381 0.00 0.00 37.87 3.85
611 856 1.477295 CCTCCAGACCTAAGTTCGGAC 59.523 57.143 0.00 0.00 0.00 4.79
612 857 1.076677 ACCTCCAGACCTAAGTTCGGA 59.923 52.381 0.00 0.00 0.00 4.55
613 858 1.558233 ACCTCCAGACCTAAGTTCGG 58.442 55.000 0.00 0.00 0.00 4.30
614 859 2.415625 CGAACCTCCAGACCTAAGTTCG 60.416 54.545 8.45 8.45 46.87 3.95
615 860 2.824341 TCGAACCTCCAGACCTAAGTTC 59.176 50.000 0.00 0.00 0.00 3.01
616 861 2.826725 CTCGAACCTCCAGACCTAAGTT 59.173 50.000 0.00 0.00 0.00 2.66
617 862 2.448453 CTCGAACCTCCAGACCTAAGT 58.552 52.381 0.00 0.00 0.00 2.24
618 863 1.135333 GCTCGAACCTCCAGACCTAAG 59.865 57.143 0.00 0.00 0.00 2.18
619 864 1.183549 GCTCGAACCTCCAGACCTAA 58.816 55.000 0.00 0.00 0.00 2.69
620 865 0.039180 TGCTCGAACCTCCAGACCTA 59.961 55.000 0.00 0.00 0.00 3.08
621 866 1.228894 TGCTCGAACCTCCAGACCT 60.229 57.895 0.00 0.00 0.00 3.85
622 867 1.079750 GTGCTCGAACCTCCAGACC 60.080 63.158 0.00 0.00 0.00 3.85
623 868 1.079750 GGTGCTCGAACCTCCAGAC 60.080 63.158 0.00 0.00 37.24 3.51
624 869 1.533033 TGGTGCTCGAACCTCCAGA 60.533 57.895 7.76 0.00 41.16 3.86
625 870 1.079543 CTGGTGCTCGAACCTCCAG 60.080 63.158 15.29 15.29 41.16 3.86
626 871 2.583441 CCTGGTGCTCGAACCTCCA 61.583 63.158 7.76 7.02 41.16 3.86
627 872 1.617947 ATCCTGGTGCTCGAACCTCC 61.618 60.000 7.76 2.90 41.16 4.30
628 873 0.250513 AATCCTGGTGCTCGAACCTC 59.749 55.000 7.76 0.00 41.16 3.85
629 874 0.036010 CAATCCTGGTGCTCGAACCT 60.036 55.000 7.76 0.00 41.16 3.50
630 875 0.036388 TCAATCCTGGTGCTCGAACC 60.036 55.000 0.00 0.00 40.94 3.62
631 876 1.464997 GTTCAATCCTGGTGCTCGAAC 59.535 52.381 0.00 0.00 0.00 3.95
632 877 1.610624 GGTTCAATCCTGGTGCTCGAA 60.611 52.381 0.00 0.00 0.00 3.71
633 878 0.036388 GGTTCAATCCTGGTGCTCGA 60.036 55.000 0.00 0.00 0.00 4.04
634 879 0.036010 AGGTTCAATCCTGGTGCTCG 60.036 55.000 0.00 0.00 36.35 5.03
635 880 1.815003 CAAGGTTCAATCCTGGTGCTC 59.185 52.381 0.00 0.00 37.93 4.26
636 881 1.425066 TCAAGGTTCAATCCTGGTGCT 59.575 47.619 0.00 0.00 37.93 4.40
637 882 1.909700 TCAAGGTTCAATCCTGGTGC 58.090 50.000 0.00 0.00 37.93 5.01
638 883 2.756760 CCATCAAGGTTCAATCCTGGTG 59.243 50.000 0.00 0.00 37.93 4.17
639 884 2.291800 CCCATCAAGGTTCAATCCTGGT 60.292 50.000 0.00 0.00 37.93 4.00
640 885 2.381911 CCCATCAAGGTTCAATCCTGG 58.618 52.381 0.00 0.00 37.93 4.45
641 886 1.753073 GCCCATCAAGGTTCAATCCTG 59.247 52.381 0.00 0.00 37.93 3.86
642 887 1.642762 AGCCCATCAAGGTTCAATCCT 59.357 47.619 0.00 0.00 39.84 3.24
643 888 1.753073 CAGCCCATCAAGGTTCAATCC 59.247 52.381 0.00 0.00 34.66 3.01
644 889 1.753073 CCAGCCCATCAAGGTTCAATC 59.247 52.381 0.00 0.00 34.66 2.67
645 890 1.620524 CCCAGCCCATCAAGGTTCAAT 60.621 52.381 0.00 0.00 34.66 2.57
646 891 0.251742 CCCAGCCCATCAAGGTTCAA 60.252 55.000 0.00 0.00 34.66 2.69
652 897 1.706866 TGATATCCCCAGCCCATCAAG 59.293 52.381 0.00 0.00 0.00 3.02
653 898 1.425066 GTGATATCCCCAGCCCATCAA 59.575 52.381 0.00 0.00 0.00 2.57
656 901 1.070604 CTGTGATATCCCCAGCCCAT 58.929 55.000 0.00 0.00 0.00 4.00
666 911 7.506114 TGTATGGTTAAAGGGACTGTGATATC 58.494 38.462 0.00 0.00 40.86 1.63
670 915 5.310451 GTTGTATGGTTAAAGGGACTGTGA 58.690 41.667 0.00 0.00 40.86 3.58
673 918 4.457949 GTGGTTGTATGGTTAAAGGGACTG 59.542 45.833 0.00 0.00 40.86 3.51
698 943 4.902443 TCTTTTAACATGCGAACCAACA 57.098 36.364 0.00 0.00 0.00 3.33
699 944 6.254804 ACTTTTCTTTTAACATGCGAACCAAC 59.745 34.615 0.00 0.00 0.00 3.77
727 972 3.987868 GTGACAGCGTACAAGAGAAATGA 59.012 43.478 0.00 0.00 0.00 2.57
1171 1431 4.116238 GTTTCTCTAGCCTCCGATTCAAG 58.884 47.826 0.00 0.00 0.00 3.02
1214 1474 2.969827 CCACCCGCACCAAAATCC 59.030 61.111 0.00 0.00 0.00 3.01
1246 1507 2.627945 CAAGCGCACAAACCTAGGATA 58.372 47.619 17.98 0.00 0.00 2.59
1387 1648 5.748630 CGATGGAAGATTTACATCTCGTGAA 59.251 40.000 11.18 0.00 39.00 3.18
1411 1672 1.936547 GGATCTGATGTTCGCCTTGTC 59.063 52.381 0.00 0.00 0.00 3.18
1560 1831 7.161900 CACAAATACATACACACTTTTATCGCG 59.838 37.037 0.00 0.00 0.00 5.87
1801 2073 6.265196 TGGCAAACACACTATTTGAAAGAGAT 59.735 34.615 6.56 0.00 39.01 2.75
1881 2153 6.252869 ACACTTTCTGTTTATATACGTGAGCG 59.747 38.462 0.00 0.00 44.93 5.03
2027 2299 6.238648 GGTCTTGTAACAACATAACAAGCACT 60.239 38.462 9.08 0.00 46.18 4.40
2203 2475 0.742990 TGCAAGAAATAGCCCCGTCG 60.743 55.000 0.00 0.00 0.00 5.12
2402 2674 1.240337 AGGGATAGGGGTGTGGGGTA 61.240 60.000 0.00 0.00 0.00 3.69
2411 2683 5.600749 TCTAAGGCTAATTAGGGATAGGGG 58.399 45.833 14.28 0.00 34.20 4.79
2438 3405 1.478654 GGGTTCGGGGATGCATGTTAT 60.479 52.381 2.46 0.00 0.00 1.89
2441 3408 1.863155 AAGGGTTCGGGGATGCATGT 61.863 55.000 2.46 0.00 0.00 3.21
2449 3416 0.252057 AAATTCCCAAGGGTTCGGGG 60.252 55.000 4.80 0.00 43.29 5.73
2469 3436 0.034896 AGGGATGTGTGGTCACGAAC 59.965 55.000 0.00 0.00 46.49 3.95
2843 3812 4.994217 TGAACATTATGTTGCTCGAGAACA 59.006 37.500 23.37 23.37 41.28 3.18
2869 3838 8.691661 TCTAGTTCTTAATGTTTGAAAGCCTT 57.308 30.769 0.00 0.00 0.00 4.35
2873 3842 9.665264 GGTGTTCTAGTTCTTAATGTTTGAAAG 57.335 33.333 0.00 0.00 0.00 2.62
2882 3851 3.262405 TGCGGGGTGTTCTAGTTCTTAAT 59.738 43.478 0.00 0.00 0.00 1.40
2889 3858 1.751349 AACGTGCGGGGTGTTCTAGT 61.751 55.000 0.00 0.00 0.00 2.57
2890 3859 1.005394 AACGTGCGGGGTGTTCTAG 60.005 57.895 0.00 0.00 0.00 2.43
2891 3860 1.301087 CAACGTGCGGGGTGTTCTA 60.301 57.895 0.00 0.00 0.00 2.10
2904 3873 1.608590 CAGAAAATCCCACAGCAACGT 59.391 47.619 0.00 0.00 0.00 3.99
2970 3940 3.281240 CATGCCTTGGAGTGCACC 58.719 61.111 14.63 4.90 40.88 5.01
2980 3950 0.323360 ATACACCGTTGCCATGCCTT 60.323 50.000 0.00 0.00 0.00 4.35
2990 3960 2.036217 TCTCGTGGTTGAATACACCGTT 59.964 45.455 0.00 0.00 34.18 4.44
2992 3962 2.357327 TCTCGTGGTTGAATACACCG 57.643 50.000 0.00 0.00 34.18 4.94
3004 3974 5.359756 TCATACATTCAGGATTTCTCGTGG 58.640 41.667 0.00 0.00 37.75 4.94
3058 4028 5.925509 AGCTTTACACCTCAGAACTGTTTA 58.074 37.500 0.00 0.00 0.00 2.01
3059 4029 4.781934 AGCTTTACACCTCAGAACTGTTT 58.218 39.130 0.00 0.00 0.00 2.83
3063 4033 4.284746 AGCTTAGCTTTACACCTCAGAACT 59.715 41.667 0.00 0.00 33.89 3.01
3069 4039 7.307455 GCACAATATAGCTTAGCTTTACACCTC 60.307 40.741 13.44 0.00 40.44 3.85
3078 4048 6.373774 GGAATGATGCACAATATAGCTTAGCT 59.626 38.462 12.67 12.67 43.41 3.32
3123 4093 4.622260 TCTTGATCCATGTTGTGAGACA 57.378 40.909 0.00 0.00 0.00 3.41
3205 4175 6.095432 TGCTTACACAGGCAATTTGTTTAT 57.905 33.333 0.00 0.00 35.40 1.40
3213 4183 0.819582 GCCATGCTTACACAGGCAAT 59.180 50.000 0.00 0.00 45.30 3.56
3229 4199 2.032965 TTACCTAAGGTGGTCTGCCA 57.967 50.000 0.00 0.00 43.73 4.92
3261 4231 1.554392 TCGTTTTTGCATGTGTGTGC 58.446 45.000 0.00 0.00 45.25 4.57
3282 4254 8.067784 CGAAACACAATGAACTACACATTTACT 58.932 33.333 0.00 0.00 36.07 2.24
3283 4255 7.149192 GCGAAACACAATGAACTACACATTTAC 60.149 37.037 0.00 0.00 36.07 2.01
3284 4256 6.853872 GCGAAACACAATGAACTACACATTTA 59.146 34.615 0.00 0.00 36.07 1.40
3285 4257 5.685511 GCGAAACACAATGAACTACACATTT 59.314 36.000 0.00 0.00 36.07 2.32
3312 4285 2.093075 AGACAACTGAGAGGGATGCATG 60.093 50.000 2.46 0.00 0.00 4.06
3314 4287 1.649321 AGACAACTGAGAGGGATGCA 58.351 50.000 0.00 0.00 0.00 3.96
3366 4339 6.034256 GTGTTGATTAACAGATTCTGCATTGC 59.966 38.462 13.64 0.46 46.75 3.56
3367 4340 7.272731 CAGTGTTGATTAACAGATTCTGCATTG 59.727 37.037 13.64 4.59 46.75 2.82
3368 4341 7.175467 TCAGTGTTGATTAACAGATTCTGCATT 59.825 33.333 13.64 4.36 46.75 3.56
3369 4342 6.656270 TCAGTGTTGATTAACAGATTCTGCAT 59.344 34.615 13.64 5.77 46.75 3.96
3374 4347 9.979270 CTTATGTCAGTGTTGATTAACAGATTC 57.021 33.333 2.84 0.00 46.75 2.52
3458 4434 7.135467 ACAGTTTTCGTTTGCAAAATTTGTTT 58.865 26.923 14.67 0.00 0.00 2.83
3460 4436 6.234723 ACAGTTTTCGTTTGCAAAATTTGT 57.765 29.167 14.67 8.80 0.00 2.83
3470 4446 6.682863 CAGAAACTCTGTACAGTTTTCGTTTG 59.317 38.462 27.94 22.17 44.91 2.93
3509 4485 5.598830 TCTTTCTCTCTAATCCGGTTATGCT 59.401 40.000 0.00 0.00 0.00 3.79
3519 4495 7.605449 AGCATAGCTCATCTTTCTCTCTAATC 58.395 38.462 0.00 0.00 30.62 1.75
3536 4512 0.605589 GTAGGCATCGGAGCATAGCT 59.394 55.000 0.00 0.00 43.88 3.32
3540 4516 1.750930 CAGGTAGGCATCGGAGCAT 59.249 57.895 2.61 0.00 35.83 3.79
3541 4517 2.434843 CCAGGTAGGCATCGGAGCA 61.435 63.158 2.61 0.00 35.83 4.26
3542 4518 2.370647 GACCAGGTAGGCATCGGAGC 62.371 65.000 0.00 0.00 43.14 4.70
3543 4519 1.742768 GACCAGGTAGGCATCGGAG 59.257 63.158 0.00 0.00 43.14 4.63
3544 4520 2.125326 CGACCAGGTAGGCATCGGA 61.125 63.158 0.00 0.00 43.14 4.55
3545 4521 2.417516 CGACCAGGTAGGCATCGG 59.582 66.667 0.00 0.00 43.14 4.18
3556 4532 0.167470 CAACAGAAGCATGCGACCAG 59.833 55.000 13.01 5.37 0.00 4.00
3562 4538 4.797471 TGATGTTTACAACAGAAGCATGC 58.203 39.130 10.51 10.51 45.95 4.06
3584 4560 9.413734 CTCCTATTAACTTTTGGGATTCAATCT 57.586 33.333 0.00 0.00 34.98 2.40
3585 4561 9.408648 TCTCCTATTAACTTTTGGGATTCAATC 57.591 33.333 0.00 0.00 34.98 2.67
3608 5453 2.158971 GCAGAACTCCCATCCTCTTCTC 60.159 54.545 0.00 0.00 0.00 2.87
3616 5461 2.111384 TCTAGGTGCAGAACTCCCATC 58.889 52.381 0.00 0.00 31.89 3.51
3617 5462 2.254152 TCTAGGTGCAGAACTCCCAT 57.746 50.000 0.00 0.00 31.89 4.00
3620 5465 3.431486 CCATCTTCTAGGTGCAGAACTCC 60.431 52.174 0.00 0.00 31.34 3.85
3644 5489 3.067106 ACACAGGATCACAAACGACATC 58.933 45.455 0.00 0.00 0.00 3.06
3661 5506 2.848679 TGGCTCCAGCTCCACACA 60.849 61.111 0.00 0.00 41.70 3.72
3680 5525 2.851195 ACCAATCGGCATTATGTCCTC 58.149 47.619 0.00 0.00 34.57 3.71
3711 5559 5.526111 TCTTCGGTTTCCTTTTTAGTCTGTG 59.474 40.000 0.00 0.00 0.00 3.66
3723 5571 1.002544 CTTCTGCCTCTTCGGTTTCCT 59.997 52.381 0.00 0.00 34.25 3.36
3725 5573 1.443802 CCTTCTGCCTCTTCGGTTTC 58.556 55.000 0.00 0.00 34.25 2.78
3730 5578 0.324943 TTTCCCCTTCTGCCTCTTCG 59.675 55.000 0.00 0.00 0.00 3.79
3744 5592 7.148306 TGCTCGATTCTAATTAGTTTGTTTCCC 60.148 37.037 12.19 0.00 0.00 3.97
3750 5598 7.743104 ACAGTTGCTCGATTCTAATTAGTTTG 58.257 34.615 12.19 5.89 0.00 2.93
3774 6893 1.287425 CCGCGTCCAATTCCTAAGAC 58.713 55.000 4.92 0.00 0.00 3.01
3791 6910 6.264292 TGGTTGTATTATCAATCAAATCCCCG 59.736 38.462 0.00 0.00 35.81 5.73
3792 6911 7.595819 TGGTTGTATTATCAATCAAATCCCC 57.404 36.000 0.00 0.00 35.81 4.81
3801 6920 5.650266 TGAGCCGTTTGGTTGTATTATCAAT 59.350 36.000 0.00 0.00 37.67 2.57
3814 6933 3.550030 CCTGTTAAAACTGAGCCGTTTGG 60.550 47.826 1.72 0.00 37.20 3.28
3816 6935 3.066203 CACCTGTTAAAACTGAGCCGTTT 59.934 43.478 1.72 0.00 38.66 3.60
3827 6946 2.171027 ACCTCCACGTCACCTGTTAAAA 59.829 45.455 0.00 0.00 0.00 1.52
3840 6959 2.519377 TTTGTACACAGACCTCCACG 57.481 50.000 0.00 0.00 0.00 4.94
3848 6967 7.412455 CGTGTATACATGCATTTTGTACACAGA 60.412 37.037 27.39 5.23 37.58 3.41
3851 6970 6.681178 GTCGTGTATACATGCATTTTGTACAC 59.319 38.462 22.84 22.84 35.04 2.90
3873 6992 0.363512 CACGTCAGCAATTCTCGTCG 59.636 55.000 0.00 0.00 32.47 5.12
3900 7019 1.076485 GCAGCCCCTCCACATCATT 60.076 57.895 0.00 0.00 0.00 2.57
3911 7030 0.968405 TTTTCTCAACATGCAGCCCC 59.032 50.000 0.00 0.00 0.00 5.80
3915 7034 5.051816 ACAACCAATTTTCTCAACATGCAG 58.948 37.500 0.00 0.00 0.00 4.41
3928 7047 4.396357 TGATCCCCACTACAACCAATTT 57.604 40.909 0.00 0.00 0.00 1.82
3938 7057 6.945636 TTCTTAAGAAGTTGATCCCCACTA 57.054 37.500 13.99 0.00 0.00 2.74
3939 7058 5.843019 TTCTTAAGAAGTTGATCCCCACT 57.157 39.130 13.99 0.00 0.00 4.00
4039 7158 4.305769 GAAAATACAGGTTTGTGCATGCA 58.694 39.130 18.46 18.46 38.23 3.96
4158 7278 2.717639 AACCTCTATGACCATGTGCC 57.282 50.000 0.00 0.00 0.00 5.01
4159 7279 3.877508 GGTTAACCTCTATGACCATGTGC 59.122 47.826 17.83 0.00 0.00 4.57
4189 7309 3.665971 CCTTGCCCTGGCTTCCCT 61.666 66.667 9.97 0.00 42.51 4.20
4206 7326 3.616379 GTCAAGCACACTCTCTGCTATTC 59.384 47.826 0.00 0.00 44.45 1.75
4307 7428 3.745799 TCGGCTATTTCTTGTTGGTTGA 58.254 40.909 0.00 0.00 0.00 3.18
4326 7447 7.199766 AGCAGAGATAACTGAGTCTATTTTCG 58.800 38.462 0.00 0.00 39.94 3.46
4346 7477 3.689161 GTGTGTTATGGCATGTTAGCAGA 59.311 43.478 10.98 0.00 35.83 4.26
4716 9109 2.630580 AGCTGCTGTAGGGCTATTACTC 59.369 50.000 0.00 0.00 34.31 2.59
4762 9155 1.656652 CAGATCTGCGGGAAAACGAT 58.343 50.000 10.38 0.00 35.47 3.73
4765 9158 1.672881 CATCCAGATCTGCGGGAAAAC 59.327 52.381 17.76 0.00 44.23 2.43
4767 9160 0.181114 CCATCCAGATCTGCGGGAAA 59.819 55.000 17.76 0.00 44.23 3.13
4768 9161 0.690744 TCCATCCAGATCTGCGGGAA 60.691 55.000 17.76 5.64 44.23 3.97
4769 9162 0.690744 TTCCATCCAGATCTGCGGGA 60.691 55.000 17.76 18.35 45.14 5.14
4771 9164 3.407424 TTATTCCATCCAGATCTGCGG 57.593 47.619 17.76 15.97 0.00 5.69
4772 9165 7.465111 CGAATATTTATTCCATCCAGATCTGCG 60.465 40.741 17.76 10.69 39.04 5.18
4773 9166 7.201679 CCGAATATTTATTCCATCCAGATCTGC 60.202 40.741 17.76 0.00 39.04 4.26
4774 9167 8.043113 TCCGAATATTTATTCCATCCAGATCTG 58.957 37.037 16.24 16.24 39.04 2.90
4775 9168 8.043710 GTCCGAATATTTATTCCATCCAGATCT 58.956 37.037 5.05 0.00 39.04 2.75
4776 9169 7.824289 TGTCCGAATATTTATTCCATCCAGATC 59.176 37.037 5.05 0.00 39.04 2.75
4777 9170 7.689299 TGTCCGAATATTTATTCCATCCAGAT 58.311 34.615 5.05 0.00 39.04 2.90
4804 9197 2.031870 GAATCAGCCAATTACACCCCC 58.968 52.381 0.00 0.00 0.00 5.40
4817 9210 3.117046 GCACTAGAGTAACCGAATCAGC 58.883 50.000 0.00 0.00 0.00 4.26
4822 9215 5.972107 AAGTAAGCACTAGAGTAACCGAA 57.028 39.130 0.00 0.00 33.48 4.30
4876 9269 0.250467 TTGCTCCAACCTGAGACAGC 60.250 55.000 0.00 0.00 34.11 4.40
4980 9376 6.919115 GGAAGAAAGATGGTAGAGACGTTATC 59.081 42.308 0.00 0.00 0.00 1.75
5034 9430 4.513406 TCCAGTTCTTTGTAAACCTGGT 57.487 40.909 0.00 0.00 31.98 4.00
5145 9541 4.903054 TCATCACATCTTCAGCAGTTTCT 58.097 39.130 0.00 0.00 0.00 2.52
5200 9596 3.947910 ACATGGTTTTGCAGAAGATGG 57.052 42.857 11.52 0.00 0.00 3.51
5211 9607 2.555227 CCAGGGCTGTCTACATGGTTTT 60.555 50.000 0.00 0.00 0.00 2.43
5237 9633 7.170489 CACAGTACATCTGAATAATGTAGCTGG 59.830 40.741 18.72 10.95 46.27 4.85
5389 9785 5.751243 ATTGTACCATCTGCGGTATTTTC 57.249 39.130 0.00 0.00 43.35 2.29
5394 9790 6.174760 AGTTAAAATTGTACCATCTGCGGTA 58.825 36.000 0.00 0.00 40.67 4.02
5396 9792 5.560966 AGTTAAAATTGTACCATCTGCGG 57.439 39.130 0.00 0.00 0.00 5.69
5397 9793 6.238374 CCCTAGTTAAAATTGTACCATCTGCG 60.238 42.308 0.00 0.00 0.00 5.18
5431 9840 2.139323 AAAATCCCTAGTTTCCCGCC 57.861 50.000 0.00 0.00 0.00 6.13
5464 9873 1.228003 TGGCATCGGGTTCAACGTT 60.228 52.632 0.00 0.00 0.00 3.99
5542 9951 3.002102 TCGGCAAGTTAACGGGTTAATC 58.998 45.455 7.22 2.66 37.37 1.75
5543 9952 3.056588 TCGGCAAGTTAACGGGTTAAT 57.943 42.857 7.22 0.00 37.37 1.40
5544 9953 2.540265 TCGGCAAGTTAACGGGTTAA 57.460 45.000 0.00 0.05 33.10 2.01
5549 9958 2.031683 GGATGAATCGGCAAGTTAACGG 59.968 50.000 0.00 0.00 0.00 4.44
5550 9959 2.031683 GGGATGAATCGGCAAGTTAACG 59.968 50.000 0.00 0.00 0.00 3.18
5574 9983 1.134560 GCTACTCGGTGACCCTACAAG 59.865 57.143 0.00 0.00 0.00 3.16
5576 9985 0.038599 TGCTACTCGGTGACCCTACA 59.961 55.000 0.00 0.00 0.00 2.74
5586 9995 6.207213 ACGATAAAGTTTATCTGCTACTCGG 58.793 40.000 25.74 13.72 0.00 4.63
5607 10016 9.299963 CAGCAATTTAATCAATTAATTGGACGA 57.700 29.630 24.40 8.74 38.30 4.20
5608 10017 9.299963 TCAGCAATTTAATCAATTAATTGGACG 57.700 29.630 24.40 2.97 38.30 4.79
5619 10028 8.602328 CGGCAAATTAATCAGCAATTTAATCAA 58.398 29.630 12.43 0.00 34.61 2.57
5620 10029 7.978414 TCGGCAAATTAATCAGCAATTTAATCA 59.022 29.630 12.43 0.00 34.61 2.57
5621 10030 8.351495 TCGGCAAATTAATCAGCAATTTAATC 57.649 30.769 12.43 0.00 34.61 1.75
5622 10031 8.891671 ATCGGCAAATTAATCAGCAATTTAAT 57.108 26.923 12.43 0.00 34.61 1.40
5623 10032 8.715191 AATCGGCAAATTAATCAGCAATTTAA 57.285 26.923 12.43 0.00 34.61 1.52
5624 10033 9.462174 CTAATCGGCAAATTAATCAGCAATTTA 57.538 29.630 12.43 6.88 34.61 1.40
5625 10034 7.042523 GCTAATCGGCAAATTAATCAGCAATTT 60.043 33.333 12.43 6.29 36.31 1.82
5626 10035 6.421801 GCTAATCGGCAAATTAATCAGCAATT 59.578 34.615 12.43 12.39 0.00 2.32
5627 10036 5.922544 GCTAATCGGCAAATTAATCAGCAAT 59.077 36.000 12.43 4.68 0.00 3.56
5628 10037 5.067674 AGCTAATCGGCAAATTAATCAGCAA 59.932 36.000 12.43 2.92 34.17 3.91
5629 10038 4.580167 AGCTAATCGGCAAATTAATCAGCA 59.420 37.500 12.43 0.00 34.17 4.41
5630 10039 5.113502 AGCTAATCGGCAAATTAATCAGC 57.886 39.130 4.05 4.05 34.17 4.26
5636 10045 8.736244 GGGATTAATAAGCTAATCGGCAAATTA 58.264 33.333 0.00 0.00 38.61 1.40
5637 10046 7.309805 GGGGATTAATAAGCTAATCGGCAAATT 60.310 37.037 0.00 0.00 38.61 1.82
5638 10047 6.152831 GGGGATTAATAAGCTAATCGGCAAAT 59.847 38.462 0.00 0.00 38.61 2.32
5639 10048 5.475564 GGGGATTAATAAGCTAATCGGCAAA 59.524 40.000 0.00 0.00 38.61 3.68
5640 10049 5.007682 GGGGATTAATAAGCTAATCGGCAA 58.992 41.667 0.00 0.00 38.61 4.52
5641 10050 4.288626 AGGGGATTAATAAGCTAATCGGCA 59.711 41.667 0.00 0.00 38.61 5.69
5642 10051 4.844884 AGGGGATTAATAAGCTAATCGGC 58.155 43.478 0.00 0.00 38.61 5.54
5643 10052 7.184067 AGTAGGGGATTAATAAGCTAATCGG 57.816 40.000 0.00 0.00 38.61 4.18
5644 10053 6.973474 CGAGTAGGGGATTAATAAGCTAATCG 59.027 42.308 0.00 0.00 38.61 3.34
5645 10054 6.757478 GCGAGTAGGGGATTAATAAGCTAATC 59.243 42.308 0.00 0.00 37.50 1.75
5646 10055 6.351966 GGCGAGTAGGGGATTAATAAGCTAAT 60.352 42.308 0.00 0.00 0.00 1.73
5647 10056 5.046807 GGCGAGTAGGGGATTAATAAGCTAA 60.047 44.000 0.00 0.00 0.00 3.09
5648 10057 4.465305 GGCGAGTAGGGGATTAATAAGCTA 59.535 45.833 0.00 0.00 0.00 3.32
5649 10058 3.261137 GGCGAGTAGGGGATTAATAAGCT 59.739 47.826 0.00 0.00 0.00 3.74
5650 10059 3.007614 TGGCGAGTAGGGGATTAATAAGC 59.992 47.826 0.00 0.00 0.00 3.09
5651 10060 4.822026 CTGGCGAGTAGGGGATTAATAAG 58.178 47.826 0.00 0.00 0.00 1.73
5652 10061 3.007614 GCTGGCGAGTAGGGGATTAATAA 59.992 47.826 0.00 0.00 0.00 1.40
5653 10062 2.565834 GCTGGCGAGTAGGGGATTAATA 59.434 50.000 0.00 0.00 0.00 0.98
5654 10063 1.348036 GCTGGCGAGTAGGGGATTAAT 59.652 52.381 0.00 0.00 0.00 1.40
5655 10064 0.756903 GCTGGCGAGTAGGGGATTAA 59.243 55.000 0.00 0.00 0.00 1.40
5656 10065 1.119574 GGCTGGCGAGTAGGGGATTA 61.120 60.000 0.00 0.00 0.00 1.75
5657 10066 2.444256 GGCTGGCGAGTAGGGGATT 61.444 63.158 0.00 0.00 0.00 3.01
5658 10067 2.844839 GGCTGGCGAGTAGGGGAT 60.845 66.667 0.00 0.00 0.00 3.85
5659 10068 3.916438 TTGGCTGGCGAGTAGGGGA 62.916 63.158 0.00 0.00 0.00 4.81
5660 10069 3.399181 TTGGCTGGCGAGTAGGGG 61.399 66.667 0.00 0.00 0.00 4.79
5661 10070 2.125106 GTTGGCTGGCGAGTAGGG 60.125 66.667 0.00 0.00 0.00 3.53
5662 10071 2.125106 GGTTGGCTGGCGAGTAGG 60.125 66.667 0.00 0.00 0.00 3.18
5663 10072 2.509336 CGGTTGGCTGGCGAGTAG 60.509 66.667 0.00 0.00 0.00 2.57
5664 10073 2.992689 TCGGTTGGCTGGCGAGTA 60.993 61.111 0.00 0.00 0.00 2.59
5665 10074 4.379243 CTCGGTTGGCTGGCGAGT 62.379 66.667 0.00 0.00 0.00 4.18
5670 10079 3.315142 TAGCTGCTCGGTTGGCTGG 62.315 63.158 4.91 0.00 36.40 4.85
5671 10080 2.103042 GTAGCTGCTCGGTTGGCTG 61.103 63.158 4.91 0.00 36.40 4.85
5672 10081 2.266055 GTAGCTGCTCGGTTGGCT 59.734 61.111 4.91 0.00 38.62 4.75
5673 10082 2.820037 GGTAGCTGCTCGGTTGGC 60.820 66.667 4.91 0.00 0.00 4.52
5674 10083 1.448540 CTGGTAGCTGCTCGGTTGG 60.449 63.158 4.91 0.00 0.00 3.77
5675 10084 0.320771 AACTGGTAGCTGCTCGGTTG 60.321 55.000 4.91 0.00 0.00 3.77
5676 10085 1.204941 CTAACTGGTAGCTGCTCGGTT 59.795 52.381 16.67 16.67 34.74 4.44
5677 10086 0.818296 CTAACTGGTAGCTGCTCGGT 59.182 55.000 4.91 0.41 0.00 4.69
5678 10087 3.650409 CTAACTGGTAGCTGCTCGG 57.350 57.895 4.91 0.00 0.00 4.63
5686 10095 5.637810 TGTTGAAGAAATCGCTAACTGGTAG 59.362 40.000 0.00 0.00 0.00 3.18
5687 10096 5.543714 TGTTGAAGAAATCGCTAACTGGTA 58.456 37.500 0.00 0.00 0.00 3.25
5688 10097 4.385825 TGTTGAAGAAATCGCTAACTGGT 58.614 39.130 0.00 0.00 0.00 4.00
5689 10098 5.356882 TTGTTGAAGAAATCGCTAACTGG 57.643 39.130 0.00 0.00 0.00 4.00
5690 10099 5.284660 GCATTGTTGAAGAAATCGCTAACTG 59.715 40.000 0.00 0.00 0.00 3.16
5691 10100 5.048782 TGCATTGTTGAAGAAATCGCTAACT 60.049 36.000 0.00 0.00 0.00 2.24
5692 10101 5.153513 TGCATTGTTGAAGAAATCGCTAAC 58.846 37.500 0.00 0.00 0.00 2.34
5693 10102 5.369685 TGCATTGTTGAAGAAATCGCTAA 57.630 34.783 0.00 0.00 0.00 3.09
5694 10103 5.369685 TTGCATTGTTGAAGAAATCGCTA 57.630 34.783 0.00 0.00 0.00 4.26
5695 10104 3.921119 TGCATTGTTGAAGAAATCGCT 57.079 38.095 0.00 0.00 0.00 4.93
5696 10105 4.970472 TTTGCATTGTTGAAGAAATCGC 57.030 36.364 0.00 0.00 0.00 4.58
5703 10112 9.527566 CGGTAAAAATATTTTGCATTGTTGAAG 57.472 29.630 14.04 0.00 0.00 3.02
5704 10113 9.261180 TCGGTAAAAATATTTTGCATTGTTGAA 57.739 25.926 14.04 0.00 0.00 2.69
5705 10114 8.818141 TCGGTAAAAATATTTTGCATTGTTGA 57.182 26.923 14.04 2.93 0.00 3.18
5706 10115 9.312146 GTTCGGTAAAAATATTTTGCATTGTTG 57.688 29.630 14.04 0.85 0.00 3.33
5707 10116 9.267084 AGTTCGGTAAAAATATTTTGCATTGTT 57.733 25.926 14.04 0.00 0.00 2.83
5708 10117 8.825667 AGTTCGGTAAAAATATTTTGCATTGT 57.174 26.923 14.04 0.44 0.00 2.71
5709 10118 9.527566 CAAGTTCGGTAAAAATATTTTGCATTG 57.472 29.630 14.04 7.51 0.00 2.82
5710 10119 8.227119 GCAAGTTCGGTAAAAATATTTTGCATT 58.773 29.630 14.04 1.49 0.00 3.56
5711 10120 7.148490 GGCAAGTTCGGTAAAAATATTTTGCAT 60.148 33.333 14.04 1.84 0.00 3.96
5712 10121 6.146347 GGCAAGTTCGGTAAAAATATTTTGCA 59.854 34.615 14.04 3.13 0.00 4.08
5713 10122 6.146347 TGGCAAGTTCGGTAAAAATATTTTGC 59.854 34.615 14.04 9.40 0.00 3.68
5714 10123 7.506474 GTGGCAAGTTCGGTAAAAATATTTTG 58.494 34.615 14.04 2.31 0.00 2.44
5715 10124 6.363896 CGTGGCAAGTTCGGTAAAAATATTTT 59.636 34.615 7.64 7.64 0.00 1.82
5716 10125 5.859648 CGTGGCAAGTTCGGTAAAAATATTT 59.140 36.000 0.00 0.00 0.00 1.40
5717 10126 5.395642 CGTGGCAAGTTCGGTAAAAATATT 58.604 37.500 0.00 0.00 0.00 1.28
5718 10127 4.673320 GCGTGGCAAGTTCGGTAAAAATAT 60.673 41.667 1.69 0.00 0.00 1.28
5719 10128 3.365164 GCGTGGCAAGTTCGGTAAAAATA 60.365 43.478 1.69 0.00 0.00 1.40
5720 10129 2.606065 GCGTGGCAAGTTCGGTAAAAAT 60.606 45.455 1.69 0.00 0.00 1.82
5721 10130 1.268640 GCGTGGCAAGTTCGGTAAAAA 60.269 47.619 1.69 0.00 0.00 1.94
5724 10133 1.070105 AGCGTGGCAAGTTCGGTAA 59.930 52.632 1.69 0.00 33.69 2.85
5727 10136 4.389576 GCAGCGTGGCAAGTTCGG 62.390 66.667 1.69 0.00 0.00 4.30
5929 10348 9.801873 ATTTTCGAAGAAATTGAGAGACAAAAA 57.198 25.926 0.00 0.00 45.90 1.94
5943 10362 8.899771 GGGACCATTTCTATATTTTCGAAGAAA 58.100 33.333 9.47 9.47 45.90 2.52
5944 10363 8.272173 AGGGACCATTTCTATATTTTCGAAGAA 58.728 33.333 0.00 0.00 45.90 2.52
5945 10364 7.802117 AGGGACCATTTCTATATTTTCGAAGA 58.198 34.615 0.00 0.00 0.00 2.87
5946 10365 7.715249 TGAGGGACCATTTCTATATTTTCGAAG 59.285 37.037 0.00 0.00 0.00 3.79
5947 10366 7.570132 TGAGGGACCATTTCTATATTTTCGAA 58.430 34.615 0.00 0.00 0.00 3.71
5948 10367 7.131907 TGAGGGACCATTTCTATATTTTCGA 57.868 36.000 0.00 0.00 0.00 3.71
5949 10368 7.499232 AGTTGAGGGACCATTTCTATATTTTCG 59.501 37.037 0.00 0.00 0.00 3.46
5950 10369 8.753497 AGTTGAGGGACCATTTCTATATTTTC 57.247 34.615 0.00 0.00 0.00 2.29
5951 10370 7.780271 GGAGTTGAGGGACCATTTCTATATTTT 59.220 37.037 0.00 0.00 0.00 1.82
5952 10371 7.091993 TGGAGTTGAGGGACCATTTCTATATTT 60.092 37.037 0.00 0.00 0.00 1.40
5953 10372 6.389869 TGGAGTTGAGGGACCATTTCTATATT 59.610 38.462 0.00 0.00 0.00 1.28
5954 10373 5.911178 TGGAGTTGAGGGACCATTTCTATAT 59.089 40.000 0.00 0.00 0.00 0.86
5955 10374 5.285401 TGGAGTTGAGGGACCATTTCTATA 58.715 41.667 0.00 0.00 0.00 1.31
5956 10375 4.111577 TGGAGTTGAGGGACCATTTCTAT 58.888 43.478 0.00 0.00 0.00 1.98
5957 10376 3.526899 TGGAGTTGAGGGACCATTTCTA 58.473 45.455 0.00 0.00 0.00 2.10
5958 10377 2.348472 TGGAGTTGAGGGACCATTTCT 58.652 47.619 0.00 0.00 0.00 2.52
5959 10378 2.879103 TGGAGTTGAGGGACCATTTC 57.121 50.000 0.00 0.00 0.00 2.17
5960 10379 3.611025 TTTGGAGTTGAGGGACCATTT 57.389 42.857 0.00 0.00 32.31 2.32
5961 10380 3.230976 GTTTTGGAGTTGAGGGACCATT 58.769 45.455 0.00 0.00 32.31 3.16
5962 10381 2.490902 GGTTTTGGAGTTGAGGGACCAT 60.491 50.000 0.00 0.00 32.31 3.55
5963 10382 1.133606 GGTTTTGGAGTTGAGGGACCA 60.134 52.381 0.00 0.00 0.00 4.02
5964 10383 1.133606 TGGTTTTGGAGTTGAGGGACC 60.134 52.381 0.00 0.00 0.00 4.46
5965 10384 2.230660 CTGGTTTTGGAGTTGAGGGAC 58.769 52.381 0.00 0.00 0.00 4.46
5966 10385 1.478654 GCTGGTTTTGGAGTTGAGGGA 60.479 52.381 0.00 0.00 0.00 4.20
5967 10386 0.961753 GCTGGTTTTGGAGTTGAGGG 59.038 55.000 0.00 0.00 0.00 4.30
5968 10387 1.691196 TGCTGGTTTTGGAGTTGAGG 58.309 50.000 0.00 0.00 0.00 3.86
5969 10388 3.131046 AGTTTGCTGGTTTTGGAGTTGAG 59.869 43.478 0.00 0.00 0.00 3.02
5970 10389 3.096092 AGTTTGCTGGTTTTGGAGTTGA 58.904 40.909 0.00 0.00 0.00 3.18
5971 10390 3.189285 CAGTTTGCTGGTTTTGGAGTTG 58.811 45.455 0.00 0.00 39.01 3.16
5972 10391 2.831526 ACAGTTTGCTGGTTTTGGAGTT 59.168 40.909 0.00 0.00 46.62 3.01
5973 10392 2.456577 ACAGTTTGCTGGTTTTGGAGT 58.543 42.857 0.00 0.00 46.62 3.85
5974 10393 3.632145 ACTACAGTTTGCTGGTTTTGGAG 59.368 43.478 0.00 0.00 46.62 3.86
5975 10394 3.626930 ACTACAGTTTGCTGGTTTTGGA 58.373 40.909 0.00 0.00 46.62 3.53
5976 10395 3.243401 GGACTACAGTTTGCTGGTTTTGG 60.243 47.826 0.00 0.00 46.62 3.28
5977 10396 3.243401 GGGACTACAGTTTGCTGGTTTTG 60.243 47.826 0.00 0.00 46.62 2.44
5978 10397 2.956333 GGGACTACAGTTTGCTGGTTTT 59.044 45.455 0.00 0.00 46.62 2.43
5979 10398 2.174854 AGGGACTACAGTTTGCTGGTTT 59.825 45.455 0.00 0.00 46.62 3.27
5980 10399 1.774856 AGGGACTACAGTTTGCTGGTT 59.225 47.619 0.00 0.00 46.62 3.67
5981 10400 1.348036 GAGGGACTACAGTTTGCTGGT 59.652 52.381 0.00 0.00 43.47 4.00
5982 10401 1.347707 TGAGGGACTACAGTTTGCTGG 59.652 52.381 0.00 0.00 43.47 4.85
5983 10402 2.839486 TGAGGGACTACAGTTTGCTG 57.161 50.000 0.00 0.00 44.37 4.41
5984 10403 4.373156 AATTGAGGGACTACAGTTTGCT 57.627 40.909 0.00 0.00 41.55 3.91
5985 10404 5.453567 AAAATTGAGGGACTACAGTTTGC 57.546 39.130 0.00 0.00 41.55 3.68
5986 10405 9.810545 TTTTAAAAATTGAGGGACTACAGTTTG 57.189 29.630 0.00 0.00 41.55 2.93
5987 10406 9.811995 GTTTTAAAAATTGAGGGACTACAGTTT 57.188 29.630 1.31 0.00 41.55 2.66
5988 10407 8.418662 GGTTTTAAAAATTGAGGGACTACAGTT 58.581 33.333 1.31 0.00 41.55 3.16
5989 10408 7.255346 CGGTTTTAAAAATTGAGGGACTACAGT 60.255 37.037 1.31 0.00 41.55 3.55
5990 10409 7.081976 CGGTTTTAAAAATTGAGGGACTACAG 58.918 38.462 1.31 0.00 41.55 2.74
5991 10410 6.016108 CCGGTTTTAAAAATTGAGGGACTACA 60.016 38.462 1.31 0.00 41.55 2.74
5992 10411 6.207221 TCCGGTTTTAAAAATTGAGGGACTAC 59.793 38.462 0.00 0.00 41.55 2.73
5993 10412 6.305411 TCCGGTTTTAAAAATTGAGGGACTA 58.695 36.000 0.00 0.00 41.55 2.59
5995 10414 5.456548 TCCGGTTTTAAAAATTGAGGGAC 57.543 39.130 0.00 0.00 0.00 4.46
5996 10415 7.452189 ACTTATCCGGTTTTAAAAATTGAGGGA 59.548 33.333 0.00 4.19 0.00 4.20
5997 10416 7.608153 ACTTATCCGGTTTTAAAAATTGAGGG 58.392 34.615 0.00 0.00 0.00 4.30
5998 10417 9.483916 AAACTTATCCGGTTTTAAAAATTGAGG 57.516 29.630 0.00 2.68 33.76 3.86
6004 10423 8.575589 GGGACTAAACTTATCCGGTTTTAAAAA 58.424 33.333 0.00 0.00 37.88 1.94
6005 10424 7.944000 AGGGACTAAACTTATCCGGTTTTAAAA 59.056 33.333 0.00 0.00 36.02 1.52
6006 10425 7.460910 AGGGACTAAACTTATCCGGTTTTAAA 58.539 34.615 0.00 0.00 36.02 1.52
6007 10426 7.019656 AGGGACTAAACTTATCCGGTTTTAA 57.980 36.000 0.00 0.00 36.02 1.52
6008 10427 6.213195 TGAGGGACTAAACTTATCCGGTTTTA 59.787 38.462 0.00 0.00 41.55 1.52
6009 10428 5.013391 TGAGGGACTAAACTTATCCGGTTTT 59.987 40.000 0.00 0.00 41.55 2.43
6010 10429 4.533311 TGAGGGACTAAACTTATCCGGTTT 59.467 41.667 0.00 0.00 41.55 3.27
6011 10430 4.098894 TGAGGGACTAAACTTATCCGGTT 58.901 43.478 0.00 0.00 41.55 4.44
6012 10431 3.716431 TGAGGGACTAAACTTATCCGGT 58.284 45.455 0.00 0.00 41.55 5.28
6013 10432 4.957684 ATGAGGGACTAAACTTATCCGG 57.042 45.455 0.00 0.00 41.55 5.14
6014 10433 5.303589 TGGTATGAGGGACTAAACTTATCCG 59.696 44.000 0.00 0.00 41.55 4.18
6015 10434 6.326843 AGTGGTATGAGGGACTAAACTTATCC 59.673 42.308 0.00 0.00 41.55 2.59
6016 10435 7.362802 AGTGGTATGAGGGACTAAACTTATC 57.637 40.000 0.00 0.00 41.55 1.75
6017 10436 7.750947 AAGTGGTATGAGGGACTAAACTTAT 57.249 36.000 0.00 0.00 41.55 1.73
6018 10437 7.391620 CAAAGTGGTATGAGGGACTAAACTTA 58.608 38.462 0.00 0.00 41.55 2.24
6019 10438 6.238648 CAAAGTGGTATGAGGGACTAAACTT 58.761 40.000 0.00 0.00 41.55 2.66
6020 10439 5.280521 CCAAAGTGGTATGAGGGACTAAACT 60.281 44.000 0.00 0.00 32.24 2.66
6021 10440 4.941873 CCAAAGTGGTATGAGGGACTAAAC 59.058 45.833 0.00 0.00 32.24 2.01
6022 10441 5.174037 CCAAAGTGGTATGAGGGACTAAA 57.826 43.478 0.00 0.00 32.24 1.85
6023 10442 4.837093 CCAAAGTGGTATGAGGGACTAA 57.163 45.455 0.00 0.00 32.24 2.24
6050 10469 1.021202 CCAGTCCACGTCAGCAAAAA 58.979 50.000 0.00 0.00 0.00 1.94
6051 10470 0.107410 ACCAGTCCACGTCAGCAAAA 60.107 50.000 0.00 0.00 0.00 2.44
6052 10471 0.107410 AACCAGTCCACGTCAGCAAA 60.107 50.000 0.00 0.00 0.00 3.68
6053 10472 0.813610 CAACCAGTCCACGTCAGCAA 60.814 55.000 0.00 0.00 0.00 3.91
6054 10473 1.227527 CAACCAGTCCACGTCAGCA 60.228 57.895 0.00 0.00 0.00 4.41
6055 10474 0.814010 AACAACCAGTCCACGTCAGC 60.814 55.000 0.00 0.00 0.00 4.26
6056 10475 0.937304 CAACAACCAGTCCACGTCAG 59.063 55.000 0.00 0.00 0.00 3.51
6057 10476 0.250793 ACAACAACCAGTCCACGTCA 59.749 50.000 0.00 0.00 0.00 4.35
6058 10477 1.375551 AACAACAACCAGTCCACGTC 58.624 50.000 0.00 0.00 0.00 4.34
6059 10478 1.470890 CAAACAACAACCAGTCCACGT 59.529 47.619 0.00 0.00 0.00 4.49
6060 10479 1.202245 CCAAACAACAACCAGTCCACG 60.202 52.381 0.00 0.00 0.00 4.94
6061 10480 2.096248 TCCAAACAACAACCAGTCCAC 58.904 47.619 0.00 0.00 0.00 4.02
6062 10481 2.494073 GTTCCAAACAACAACCAGTCCA 59.506 45.455 0.00 0.00 0.00 4.02
6063 10482 2.758423 AGTTCCAAACAACAACCAGTCC 59.242 45.455 0.00 0.00 0.00 3.85
6064 10483 3.192633 ACAGTTCCAAACAACAACCAGTC 59.807 43.478 0.00 0.00 0.00 3.51
6065 10484 3.056891 CACAGTTCCAAACAACAACCAGT 60.057 43.478 0.00 0.00 0.00 4.00
6066 10485 3.510719 CACAGTTCCAAACAACAACCAG 58.489 45.455 0.00 0.00 0.00 4.00
6067 10486 2.232452 CCACAGTTCCAAACAACAACCA 59.768 45.455 0.00 0.00 0.00 3.67
6068 10487 2.418060 CCCACAGTTCCAAACAACAACC 60.418 50.000 0.00 0.00 0.00 3.77
6069 10488 2.494073 TCCCACAGTTCCAAACAACAAC 59.506 45.455 0.00 0.00 0.00 3.32
6070 10489 2.494073 GTCCCACAGTTCCAAACAACAA 59.506 45.455 0.00 0.00 0.00 2.83
6071 10490 2.096248 GTCCCACAGTTCCAAACAACA 58.904 47.619 0.00 0.00 0.00 3.33
6072 10491 1.407618 GGTCCCACAGTTCCAAACAAC 59.592 52.381 0.00 0.00 0.00 3.32
6073 10492 1.006043 TGGTCCCACAGTTCCAAACAA 59.994 47.619 0.00 0.00 0.00 2.83
6074 10493 0.626382 TGGTCCCACAGTTCCAAACA 59.374 50.000 0.00 0.00 0.00 2.83
6075 10494 1.318576 CTGGTCCCACAGTTCCAAAC 58.681 55.000 0.00 0.00 33.81 2.93
6076 10495 0.467290 GCTGGTCCCACAGTTCCAAA 60.467 55.000 0.00 0.00 40.59 3.28
6077 10496 1.150536 GCTGGTCCCACAGTTCCAA 59.849 57.895 0.00 0.00 40.59 3.53
6078 10497 2.829384 GGCTGGTCCCACAGTTCCA 61.829 63.158 0.00 0.00 40.59 3.53
6079 10498 2.034221 GGCTGGTCCCACAGTTCC 59.966 66.667 0.00 0.00 40.59 3.62
6080 10499 1.302832 CAGGCTGGTCCCACAGTTC 60.303 63.158 6.61 0.00 40.59 3.01
6081 10500 2.839098 CAGGCTGGTCCCACAGTT 59.161 61.111 6.61 0.00 40.59 3.16



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.