Multiple sequence alignment - TraesCS2A01G137900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G137900 chr2A 100.000 4966 0 0 1 4966 83781889 83786854 0.000000e+00 9171.0
1 TraesCS2A01G137900 chr2A 85.691 1824 214 31 2212 4008 82212502 82210699 0.000000e+00 1879.0
2 TraesCS2A01G137900 chr2A 96.220 635 21 3 4334 4966 83810972 83811605 0.000000e+00 1037.0
3 TraesCS2A01G137900 chr2A 75.393 191 29 10 3963 4136 82210697 82210508 5.330000e-10 76.8
4 TraesCS2A01G137900 chr2D 92.381 2218 100 27 2149 4329 83101629 83103814 0.000000e+00 3096.0
5 TraesCS2A01G137900 chr2D 85.761 1819 210 30 2219 4008 82108484 82106686 0.000000e+00 1879.0
6 TraesCS2A01G137900 chr2D 90.078 897 79 7 575 1462 83100481 83101376 0.000000e+00 1155.0
7 TraesCS2A01G137900 chr2D 87.561 410 31 15 1753 2147 121734560 121734156 1.630000e-124 457.0
8 TraesCS2A01G137900 chr2D 93.585 265 17 0 1491 1755 83101374 83101638 3.600000e-106 396.0
9 TraesCS2A01G137900 chr2D 76.440 191 27 12 3963 4136 82106684 82106495 2.460000e-13 87.9
10 TraesCS2A01G137900 chr2B 91.335 2158 159 16 2149 4282 134778712 134780865 0.000000e+00 2924.0
11 TraesCS2A01G137900 chr2B 84.876 1891 229 37 2195 4053 133849077 133847212 0.000000e+00 1855.0
12 TraesCS2A01G137900 chr2B 88.699 1053 93 12 722 1753 134777672 134778719 0.000000e+00 1262.0
13 TraesCS2A01G137900 chr2B 96.578 526 16 1 1 524 231626214 231625689 0.000000e+00 870.0
14 TraesCS2A01G137900 chr2B 96.388 526 17 1 1 524 187166011 187165486 0.000000e+00 865.0
15 TraesCS2A01G137900 chr2B 85.891 404 42 10 1756 2147 794306842 794307242 2.770000e-112 416.0
16 TraesCS2A01G137900 chr5A 95.893 633 22 3 4335 4966 168479897 168480526 0.000000e+00 1022.0
17 TraesCS2A01G137900 chr5A 95.110 634 27 3 4334 4966 168486745 168487375 0.000000e+00 996.0
18 TraesCS2A01G137900 chr5A 94.164 634 32 3 4334 4966 342919050 342918421 0.000000e+00 961.0
19 TraesCS2A01G137900 chr5A 96.388 526 17 1 1 524 32139744 32140269 0.000000e+00 865.0
20 TraesCS2A01G137900 chr5A 85.263 95 10 4 1254 1344 646183879 646183785 1.470000e-15 95.3
21 TraesCS2A01G137900 chr6A 94.340 636 30 4 4335 4966 502936734 502936101 0.000000e+00 970.0
22 TraesCS2A01G137900 chr6A 96.768 526 15 1 1 524 575099466 575098941 0.000000e+00 876.0
23 TraesCS2A01G137900 chr3A 93.711 636 35 3 4334 4966 31536541 31537174 0.000000e+00 948.0
24 TraesCS2A01G137900 chr3A 93.849 634 31 4 4335 4966 31543412 31544039 0.000000e+00 948.0
25 TraesCS2A01G137900 chr4A 93.691 634 34 5 4335 4966 629689906 629689277 0.000000e+00 944.0
26 TraesCS2A01G137900 chr4A 97.338 526 12 1 1 524 610278079 610278604 0.000000e+00 893.0
27 TraesCS2A01G137900 chr4A 78.454 789 136 28 2258 3025 684575596 684576371 7.470000e-133 484.0
28 TraesCS2A01G137900 chr4A 85.679 405 40 12 1753 2147 77437549 77437945 1.290000e-110 411.0
29 TraesCS2A01G137900 chr7A 93.553 636 36 4 4334 4966 397833010 397832377 0.000000e+00 942.0
30 TraesCS2A01G137900 chr7A 96.958 526 14 1 1 524 36160000 36160525 0.000000e+00 881.0
31 TraesCS2A01G137900 chr7A 96.768 526 15 1 1 524 118153180 118152655 0.000000e+00 876.0
32 TraesCS2A01G137900 chr7A 88.462 78 5 3 1273 1348 474730869 474730794 1.900000e-14 91.6
33 TraesCS2A01G137900 chr3B 96.768 526 15 1 1 524 20566130 20566655 0.000000e+00 876.0
34 TraesCS2A01G137900 chr3B 96.768 526 15 1 1 524 726742548 726742023 0.000000e+00 876.0
35 TraesCS2A01G137900 chr3B 88.889 81 5 2 1272 1348 482487810 482487890 4.090000e-16 97.1
36 TraesCS2A01G137900 chr4D 76.836 1062 183 46 2256 3274 477888789 477889830 1.570000e-149 540.0
37 TraesCS2A01G137900 chr3D 87.961 407 29 14 1756 2147 610209401 610209802 3.500000e-126 462.0
38 TraesCS2A01G137900 chr3D 87.206 383 35 12 1771 2147 486788643 486788269 1.650000e-114 424.0
39 TraesCS2A01G137900 chr3D 84.901 404 41 11 1756 2147 432137692 432137297 1.680000e-104 390.0
40 TraesCS2A01G137900 chr3D 90.789 76 4 1 1272 1344 389633205 389633130 1.140000e-16 99.0
41 TraesCS2A01G137900 chr6D 87.032 401 44 7 1751 2146 438157588 438157191 3.530000e-121 446.0
42 TraesCS2A01G137900 chr5D 86.064 409 41 10 1756 2150 429921147 429920741 4.590000e-115 425.0
43 TraesCS2A01G137900 chr7B 84.223 412 46 11 1755 2150 125188223 125187815 2.800000e-102 383.0
44 TraesCS2A01G137900 chr7B 85.417 96 11 3 1252 1344 482484941 482485036 4.090000e-16 97.1
45 TraesCS2A01G137900 chr1D 86.905 84 9 2 1275 1356 59951917 59951834 5.290000e-15 93.5
46 TraesCS2A01G137900 chr1A 82.828 99 14 1 1253 1348 568391296 568391198 8.860000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G137900 chr2A 83781889 83786854 4965 False 9171.00 9171 100.000000 1 4966 1 chr2A.!!$F1 4965
1 TraesCS2A01G137900 chr2A 83810972 83811605 633 False 1037.00 1037 96.220000 4334 4966 1 chr2A.!!$F2 632
2 TraesCS2A01G137900 chr2A 82210508 82212502 1994 True 977.90 1879 80.542000 2212 4136 2 chr2A.!!$R1 1924
3 TraesCS2A01G137900 chr2D 83100481 83103814 3333 False 1549.00 3096 92.014667 575 4329 3 chr2D.!!$F1 3754
4 TraesCS2A01G137900 chr2D 82106495 82108484 1989 True 983.45 1879 81.100500 2219 4136 2 chr2D.!!$R2 1917
5 TraesCS2A01G137900 chr2B 134777672 134780865 3193 False 2093.00 2924 90.017000 722 4282 2 chr2B.!!$F2 3560
6 TraesCS2A01G137900 chr2B 133847212 133849077 1865 True 1855.00 1855 84.876000 2195 4053 1 chr2B.!!$R1 1858
7 TraesCS2A01G137900 chr2B 231625689 231626214 525 True 870.00 870 96.578000 1 524 1 chr2B.!!$R3 523
8 TraesCS2A01G137900 chr2B 187165486 187166011 525 True 865.00 865 96.388000 1 524 1 chr2B.!!$R2 523
9 TraesCS2A01G137900 chr5A 168479897 168480526 629 False 1022.00 1022 95.893000 4335 4966 1 chr5A.!!$F2 631
10 TraesCS2A01G137900 chr5A 168486745 168487375 630 False 996.00 996 95.110000 4334 4966 1 chr5A.!!$F3 632
11 TraesCS2A01G137900 chr5A 342918421 342919050 629 True 961.00 961 94.164000 4334 4966 1 chr5A.!!$R1 632
12 TraesCS2A01G137900 chr5A 32139744 32140269 525 False 865.00 865 96.388000 1 524 1 chr5A.!!$F1 523
13 TraesCS2A01G137900 chr6A 502936101 502936734 633 True 970.00 970 94.340000 4335 4966 1 chr6A.!!$R1 631
14 TraesCS2A01G137900 chr6A 575098941 575099466 525 True 876.00 876 96.768000 1 524 1 chr6A.!!$R2 523
15 TraesCS2A01G137900 chr3A 31536541 31537174 633 False 948.00 948 93.711000 4334 4966 1 chr3A.!!$F1 632
16 TraesCS2A01G137900 chr3A 31543412 31544039 627 False 948.00 948 93.849000 4335 4966 1 chr3A.!!$F2 631
17 TraesCS2A01G137900 chr4A 629689277 629689906 629 True 944.00 944 93.691000 4335 4966 1 chr4A.!!$R1 631
18 TraesCS2A01G137900 chr4A 610278079 610278604 525 False 893.00 893 97.338000 1 524 1 chr4A.!!$F2 523
19 TraesCS2A01G137900 chr4A 684575596 684576371 775 False 484.00 484 78.454000 2258 3025 1 chr4A.!!$F3 767
20 TraesCS2A01G137900 chr7A 397832377 397833010 633 True 942.00 942 93.553000 4334 4966 1 chr7A.!!$R2 632
21 TraesCS2A01G137900 chr7A 36160000 36160525 525 False 881.00 881 96.958000 1 524 1 chr7A.!!$F1 523
22 TraesCS2A01G137900 chr7A 118152655 118153180 525 True 876.00 876 96.768000 1 524 1 chr7A.!!$R1 523
23 TraesCS2A01G137900 chr3B 20566130 20566655 525 False 876.00 876 96.768000 1 524 1 chr3B.!!$F1 523
24 TraesCS2A01G137900 chr3B 726742023 726742548 525 True 876.00 876 96.768000 1 524 1 chr3B.!!$R1 523
25 TraesCS2A01G137900 chr4D 477888789 477889830 1041 False 540.00 540 76.836000 2256 3274 1 chr4D.!!$F1 1018

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
800 805 0.028902 GTGAGTTTGACGCCAACACC 59.971 55.0 0.00 0.00 30.88 4.16 F
1783 1813 0.106819 GATTCAGTGCCCAGGCTCAT 60.107 55.0 10.58 0.00 42.51 2.90 F
1876 1906 0.031917 ATTTGATGCATGAGGGCCCA 60.032 50.0 27.56 3.72 0.00 5.36 F
1884 1914 0.032813 CATGAGGGCCCACTCCAAAT 60.033 55.0 27.56 3.50 36.66 2.32 F
2494 2524 0.174162 GTGCCCTTCACATGCCATTC 59.826 55.0 0.00 0.00 44.98 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1857 1887 0.031917 TGGGCCCTCATGCATCAAAT 60.032 50.000 25.70 0.00 0.00 2.32 R
3190 3266 1.382522 ATGGCCACTTCACGCTTATG 58.617 50.000 8.16 0.00 0.00 1.90 R
3615 3692 3.061848 CCCGGTGGTGGTTGATGC 61.062 66.667 0.00 0.00 0.00 3.91 R
3837 3919 4.706842 AGTTAATAATCCTCCGCACCAT 57.293 40.909 0.00 0.00 0.00 3.55 R
4180 4340 1.904287 AAAGTACTCCATTGCGGCAA 58.096 45.000 18.85 18.85 33.14 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 3.117663 AGCTTACCCTTCCAACAACTCAA 60.118 43.478 0.00 0.00 0.00 3.02
77 78 3.368427 CCTCGATGCACTTCCACTCTTTA 60.368 47.826 0.00 0.00 0.00 1.85
221 222 6.595716 ACAGCTCGCTCTTATGAAAGTTAATT 59.404 34.615 0.00 0.00 34.13 1.40
289 290 0.107703 CTCGCCTTGGCCAAGTCATA 60.108 55.000 37.09 21.41 36.72 2.15
488 489 5.066505 GCCTTTATGTGTCTGGAAGTAATGG 59.933 44.000 0.00 0.00 33.76 3.16
524 527 8.625786 TTAACTTTAATTCCCACACTACCTTC 57.374 34.615 0.00 0.00 0.00 3.46
525 528 5.567430 ACTTTAATTCCCACACTACCTTCC 58.433 41.667 0.00 0.00 0.00 3.46
526 529 2.781681 AATTCCCACACTACCTTCCG 57.218 50.000 0.00 0.00 0.00 4.30
527 530 1.652947 ATTCCCACACTACCTTCCGT 58.347 50.000 0.00 0.00 0.00 4.69
528 531 1.426751 TTCCCACACTACCTTCCGTT 58.573 50.000 0.00 0.00 0.00 4.44
529 532 1.426751 TCCCACACTACCTTCCGTTT 58.573 50.000 0.00 0.00 0.00 3.60
530 533 2.607499 TCCCACACTACCTTCCGTTTA 58.393 47.619 0.00 0.00 0.00 2.01
531 534 2.299867 TCCCACACTACCTTCCGTTTAC 59.700 50.000 0.00 0.00 0.00 2.01
532 535 2.037511 CCCACACTACCTTCCGTTTACA 59.962 50.000 0.00 0.00 0.00 2.41
533 536 3.494749 CCCACACTACCTTCCGTTTACAA 60.495 47.826 0.00 0.00 0.00 2.41
534 537 4.128643 CCACACTACCTTCCGTTTACAAA 58.871 43.478 0.00 0.00 0.00 2.83
535 538 4.024641 CCACACTACCTTCCGTTTACAAAC 60.025 45.833 0.00 0.00 35.59 2.93
536 539 4.812626 CACACTACCTTCCGTTTACAAACT 59.187 41.667 3.55 0.00 36.77 2.66
537 540 5.984926 CACACTACCTTCCGTTTACAAACTA 59.015 40.000 3.55 0.00 36.77 2.24
538 541 6.647895 CACACTACCTTCCGTTTACAAACTAT 59.352 38.462 3.55 0.00 36.77 2.12
539 542 7.172019 CACACTACCTTCCGTTTACAAACTATT 59.828 37.037 3.55 0.00 36.77 1.73
540 543 8.367156 ACACTACCTTCCGTTTACAAACTATTA 58.633 33.333 3.55 0.00 36.77 0.98
541 544 8.866956 CACTACCTTCCGTTTACAAACTATTAG 58.133 37.037 3.55 0.00 36.77 1.73
542 545 6.732531 ACCTTCCGTTTACAAACTATTAGC 57.267 37.500 3.55 0.00 36.77 3.09
543 546 5.349543 ACCTTCCGTTTACAAACTATTAGCG 59.650 40.000 3.55 0.00 36.77 4.26
544 547 4.845621 TCCGTTTACAAACTATTAGCGC 57.154 40.909 0.00 0.00 36.77 5.92
545 548 3.304026 TCCGTTTACAAACTATTAGCGCG 59.696 43.478 0.00 0.00 36.77 6.86
546 549 3.017576 CGTTTACAAACTATTAGCGCGC 58.982 45.455 26.66 26.66 36.77 6.86
547 550 3.241868 CGTTTACAAACTATTAGCGCGCT 60.242 43.478 38.01 38.01 36.77 5.92
548 551 4.261451 GTTTACAAACTATTAGCGCGCTC 58.739 43.478 40.23 14.32 36.03 5.03
549 552 0.921347 ACAAACTATTAGCGCGCTCG 59.079 50.000 40.23 25.21 39.07 5.03
550 553 0.229753 CAAACTATTAGCGCGCTCGG 59.770 55.000 40.23 25.90 35.95 4.63
551 554 1.488261 AAACTATTAGCGCGCTCGGC 61.488 55.000 40.23 4.13 35.95 5.54
552 555 2.354656 CTATTAGCGCGCTCGGCA 60.355 61.111 40.23 18.64 43.84 5.69
553 556 1.949133 CTATTAGCGCGCTCGGCAA 60.949 57.895 40.23 26.77 43.84 4.52
554 557 1.880601 CTATTAGCGCGCTCGGCAAG 61.881 60.000 40.23 23.49 43.84 4.01
563 566 2.668632 CTCGGCAAGGGCAGGTTA 59.331 61.111 0.00 0.00 43.71 2.85
564 567 1.745489 CTCGGCAAGGGCAGGTTAC 60.745 63.158 0.00 0.00 43.71 2.50
565 568 2.033448 CGGCAAGGGCAGGTTACA 59.967 61.111 0.00 0.00 43.71 2.41
566 569 2.332654 CGGCAAGGGCAGGTTACAC 61.333 63.158 0.00 0.00 43.71 2.90
567 570 2.332654 GGCAAGGGCAGGTTACACG 61.333 63.158 0.00 0.00 43.71 4.49
568 571 1.302192 GCAAGGGCAGGTTACACGA 60.302 57.895 0.00 0.00 40.72 4.35
569 572 1.574702 GCAAGGGCAGGTTACACGAC 61.575 60.000 0.00 0.00 40.72 4.34
570 573 0.250124 CAAGGGCAGGTTACACGACA 60.250 55.000 0.00 0.00 0.00 4.35
571 574 0.470766 AAGGGCAGGTTACACGACAA 59.529 50.000 0.00 0.00 0.00 3.18
572 575 0.034896 AGGGCAGGTTACACGACAAG 59.965 55.000 0.00 0.00 0.00 3.16
573 576 0.250166 GGGCAGGTTACACGACAAGT 60.250 55.000 0.00 0.00 0.00 3.16
594 597 3.337358 TCGACAACGACCTACTACATGA 58.663 45.455 0.00 0.00 43.81 3.07
598 601 2.556534 ACGACCTACTACATGAACGC 57.443 50.000 0.00 0.00 0.00 4.84
625 628 2.421107 CCTGGTGTGGATGAGGATTCAG 60.421 54.545 0.00 0.00 36.61 3.02
629 632 2.121948 TGTGGATGAGGATTCAGGAGG 58.878 52.381 0.00 0.00 36.61 4.30
630 633 1.135094 TGGATGAGGATTCAGGAGGC 58.865 55.000 0.00 0.00 36.61 4.70
631 634 0.399833 GGATGAGGATTCAGGAGGCC 59.600 60.000 0.00 0.00 36.61 5.19
632 635 0.034616 GATGAGGATTCAGGAGGCCG 59.965 60.000 0.00 0.00 36.61 6.13
633 636 0.399091 ATGAGGATTCAGGAGGCCGA 60.399 55.000 0.00 0.00 36.61 5.54
636 639 1.144936 GGATTCAGGAGGCCGACAG 59.855 63.158 0.00 0.00 0.00 3.51
638 641 0.250513 GATTCAGGAGGCCGACAGTT 59.749 55.000 0.00 0.00 0.00 3.16
641 644 1.374758 CAGGAGGCCGACAGTTCAC 60.375 63.158 0.00 0.00 0.00 3.18
646 649 1.115930 AGGCCGACAGTTCACTGAGT 61.116 55.000 14.00 0.00 46.59 3.41
666 671 1.888512 TGGTGGAGGTTAGACGTACAC 59.111 52.381 7.43 7.43 44.69 2.90
673 678 4.082354 GGAGGTTAGACGTACACAACATCT 60.082 45.833 12.38 0.00 33.48 2.90
760 765 3.451178 AGGTCACAAGTCACAACTACACT 59.549 43.478 0.00 0.00 33.48 3.55
764 769 6.238022 GGTCACAAGTCACAACTACACTAAAC 60.238 42.308 0.00 0.00 33.48 2.01
773 778 8.485591 GTCACAACTACACTAAACTCATTACAC 58.514 37.037 0.00 0.00 0.00 2.90
791 796 1.195448 CACGATGGCAGTGAGTTTGAC 59.805 52.381 0.83 0.00 41.83 3.18
798 803 1.013596 CAGTGAGTTTGACGCCAACA 58.986 50.000 0.00 0.00 30.88 3.33
800 805 0.028902 GTGAGTTTGACGCCAACACC 59.971 55.000 0.00 0.00 30.88 4.16
818 823 1.004277 ACCGCCAATCCTCTTTAGCAA 59.996 47.619 0.00 0.00 0.00 3.91
824 829 3.564352 CCAATCCTCTTTAGCAACCCCTT 60.564 47.826 0.00 0.00 0.00 3.95
847 852 1.442526 CTCATCTGCCATCGCAACCC 61.443 60.000 0.00 0.00 46.66 4.11
861 866 0.953960 CAACCCGTGGCAACTACTCC 60.954 60.000 0.00 0.00 37.61 3.85
870 875 1.819903 GGCAACTACTCCTCTCGTCTT 59.180 52.381 0.00 0.00 0.00 3.01
898 903 3.160047 CATCTCCTCGCCCCTGCT 61.160 66.667 0.00 0.00 34.43 4.24
923 928 1.615116 CCATGTCCAAGCATCACCTGT 60.615 52.381 0.00 0.00 0.00 4.00
960 965 6.620877 ACACCATCCTCTAGTATTGAACAA 57.379 37.500 0.00 0.00 0.00 2.83
974 979 8.225603 AGTATTGAACAAGAAACAACAGATGT 57.774 30.769 0.00 0.00 46.82 3.06
978 983 5.593909 TGAACAAGAAACAACAGATGTGGAT 59.406 36.000 0.00 0.00 42.99 3.41
989 994 5.282055 ACAGATGTGGATTATGATGACGT 57.718 39.130 0.00 0.00 0.00 4.34
996 1001 2.808543 GGATTATGATGACGTTGCTCCC 59.191 50.000 0.00 0.00 0.00 4.30
1080 1085 1.656652 CACTGCAGGCATACACTACC 58.343 55.000 19.93 0.00 0.00 3.18
1127 1132 7.408756 TTTCTTCCTCATCATTATGGTTTGG 57.591 36.000 0.00 0.00 33.61 3.28
1128 1133 5.448654 TCTTCCTCATCATTATGGTTTGGG 58.551 41.667 0.00 0.00 33.61 4.12
1130 1135 4.792068 TCCTCATCATTATGGTTTGGGAC 58.208 43.478 0.00 0.00 33.61 4.46
1140 1153 0.879090 GGTTTGGGACGAACATCACC 59.121 55.000 0.00 0.00 0.00 4.02
1143 1156 2.556622 GTTTGGGACGAACATCACCAAT 59.443 45.455 0.00 0.00 40.54 3.16
1411 1441 6.209788 GGTATGTATTGTCCCTTTTGGTTTGA 59.790 38.462 0.00 0.00 38.10 2.69
1414 1444 2.838637 TGTCCCTTTTGGTTTGACCT 57.161 45.000 0.00 0.00 39.58 3.85
1472 1502 2.686915 GGAGAAATGGATGAGTGCAAGG 59.313 50.000 0.00 0.00 0.00 3.61
1496 1526 4.215613 GCTGACAAATTAAAGGAGGACGTT 59.784 41.667 0.00 0.00 0.00 3.99
1633 1663 7.563906 AGTCAAATTTTTGAGGGTGAATTCAA 58.436 30.769 10.35 0.00 46.80 2.69
1668 1698 0.536460 TCAGGTTGCCCTTCGGTTTC 60.536 55.000 0.00 0.00 39.89 2.78
1707 1737 2.222027 GTCTTTGGGTGTCTTCAGGTG 58.778 52.381 0.00 0.00 0.00 4.00
1761 1791 8.888579 AAATACAAGGAACGAATATGAGTAGG 57.111 34.615 0.00 0.00 0.00 3.18
1762 1792 5.277857 ACAAGGAACGAATATGAGTAGGG 57.722 43.478 0.00 0.00 0.00 3.53
1763 1793 4.058817 CAAGGAACGAATATGAGTAGGGC 58.941 47.826 0.00 0.00 0.00 5.19
1764 1794 2.296471 AGGAACGAATATGAGTAGGGCG 59.704 50.000 0.00 0.00 0.00 6.13
1765 1795 2.295349 GGAACGAATATGAGTAGGGCGA 59.705 50.000 0.00 0.00 0.00 5.54
1766 1796 3.056749 GGAACGAATATGAGTAGGGCGAT 60.057 47.826 0.00 0.00 0.00 4.58
1767 1797 4.557205 GAACGAATATGAGTAGGGCGATT 58.443 43.478 0.00 0.00 0.00 3.34
1768 1798 4.175787 ACGAATATGAGTAGGGCGATTC 57.824 45.455 0.00 0.00 0.00 2.52
1769 1799 3.572682 ACGAATATGAGTAGGGCGATTCA 59.427 43.478 0.00 0.00 0.00 2.57
1770 1800 4.169508 CGAATATGAGTAGGGCGATTCAG 58.830 47.826 0.00 0.00 0.00 3.02
1771 1801 4.321304 CGAATATGAGTAGGGCGATTCAGT 60.321 45.833 0.00 0.00 0.00 3.41
1772 1802 2.898729 ATGAGTAGGGCGATTCAGTG 57.101 50.000 0.00 0.00 0.00 3.66
1773 1803 0.175760 TGAGTAGGGCGATTCAGTGC 59.824 55.000 0.00 0.00 0.00 4.40
1778 1808 2.825836 GGCGATTCAGTGCCCAGG 60.826 66.667 0.00 0.00 45.73 4.45
1779 1809 3.512516 GCGATTCAGTGCCCAGGC 61.513 66.667 0.38 0.38 42.35 4.85
1780 1810 2.270205 CGATTCAGTGCCCAGGCT 59.730 61.111 10.58 0.00 42.51 4.58
1781 1811 1.817099 CGATTCAGTGCCCAGGCTC 60.817 63.158 10.58 6.42 42.51 4.70
1782 1812 1.300963 GATTCAGTGCCCAGGCTCA 59.699 57.895 10.58 0.00 42.51 4.26
1783 1813 0.106819 GATTCAGTGCCCAGGCTCAT 60.107 55.000 10.58 0.00 42.51 2.90
1784 1814 0.106819 ATTCAGTGCCCAGGCTCATC 60.107 55.000 10.58 0.00 42.51 2.92
1785 1815 1.203441 TTCAGTGCCCAGGCTCATCT 61.203 55.000 10.58 0.81 42.51 2.90
1786 1816 0.325577 TCAGTGCCCAGGCTCATCTA 60.326 55.000 10.58 0.00 42.51 1.98
1787 1817 0.179062 CAGTGCCCAGGCTCATCTAC 60.179 60.000 10.58 0.00 42.51 2.59
1788 1818 0.618680 AGTGCCCAGGCTCATCTACA 60.619 55.000 10.58 0.00 42.51 2.74
1789 1819 0.462759 GTGCCCAGGCTCATCTACAC 60.463 60.000 10.58 0.00 42.51 2.90
1790 1820 1.147153 GCCCAGGCTCATCTACACC 59.853 63.158 0.08 0.00 38.26 4.16
1791 1821 1.832912 CCCAGGCTCATCTACACCC 59.167 63.158 0.00 0.00 0.00 4.61
1792 1822 1.443407 CCAGGCTCATCTACACCCG 59.557 63.158 0.00 0.00 0.00 5.28
1793 1823 1.443407 CAGGCTCATCTACACCCGG 59.557 63.158 0.00 0.00 0.00 5.73
1794 1824 1.001760 AGGCTCATCTACACCCGGT 59.998 57.895 0.00 0.00 0.00 5.28
1795 1825 0.617820 AGGCTCATCTACACCCGGTT 60.618 55.000 0.00 0.00 0.00 4.44
1796 1826 1.117150 GGCTCATCTACACCCGGTTA 58.883 55.000 0.00 0.00 0.00 2.85
1797 1827 1.068741 GGCTCATCTACACCCGGTTAG 59.931 57.143 0.00 0.00 0.00 2.34
1798 1828 2.029623 GCTCATCTACACCCGGTTAGA 58.970 52.381 0.00 3.83 0.00 2.10
1799 1829 2.429610 GCTCATCTACACCCGGTTAGAA 59.570 50.000 0.00 0.00 0.00 2.10
1800 1830 3.118884 GCTCATCTACACCCGGTTAGAAA 60.119 47.826 0.00 0.00 0.00 2.52
1801 1831 4.622220 GCTCATCTACACCCGGTTAGAAAA 60.622 45.833 0.00 0.00 0.00 2.29
1802 1832 5.671493 CTCATCTACACCCGGTTAGAAAAT 58.329 41.667 0.00 0.00 0.00 1.82
1803 1833 6.684613 GCTCATCTACACCCGGTTAGAAAATA 60.685 42.308 0.00 0.00 0.00 1.40
1804 1834 7.185318 TCATCTACACCCGGTTAGAAAATAA 57.815 36.000 0.00 0.00 0.00 1.40
1805 1835 7.798071 TCATCTACACCCGGTTAGAAAATAAT 58.202 34.615 0.00 0.00 0.00 1.28
1806 1836 8.269317 TCATCTACACCCGGTTAGAAAATAATT 58.731 33.333 0.00 0.00 0.00 1.40
1807 1837 8.557029 CATCTACACCCGGTTAGAAAATAATTC 58.443 37.037 0.00 0.00 0.00 2.17
1808 1838 7.622713 TCTACACCCGGTTAGAAAATAATTCA 58.377 34.615 0.00 0.00 0.00 2.57
1809 1839 8.269317 TCTACACCCGGTTAGAAAATAATTCAT 58.731 33.333 0.00 0.00 0.00 2.57
1810 1840 9.550406 CTACACCCGGTTAGAAAATAATTCATA 57.450 33.333 0.00 0.00 0.00 2.15
1811 1841 8.810990 ACACCCGGTTAGAAAATAATTCATAA 57.189 30.769 0.00 0.00 0.00 1.90
1812 1842 9.245481 ACACCCGGTTAGAAAATAATTCATAAA 57.755 29.630 0.00 0.00 0.00 1.40
1862 1892 4.902443 TTTTGTGCGGTAGACAATTTGA 57.098 36.364 2.79 0.00 33.41 2.69
1863 1893 5.446143 TTTTGTGCGGTAGACAATTTGAT 57.554 34.783 2.79 0.00 33.41 2.57
1864 1894 4.418013 TTGTGCGGTAGACAATTTGATG 57.582 40.909 2.79 0.00 0.00 3.07
1865 1895 2.161410 TGTGCGGTAGACAATTTGATGC 59.839 45.455 2.79 0.00 0.00 3.91
1866 1896 2.161410 GTGCGGTAGACAATTTGATGCA 59.839 45.455 2.79 0.00 0.00 3.96
1867 1897 3.016031 TGCGGTAGACAATTTGATGCAT 58.984 40.909 0.00 0.00 0.00 3.96
1868 1898 3.181498 TGCGGTAGACAATTTGATGCATG 60.181 43.478 2.46 0.00 0.00 4.06
1869 1899 3.065233 GCGGTAGACAATTTGATGCATGA 59.935 43.478 2.46 0.00 0.00 3.07
1870 1900 4.787563 GCGGTAGACAATTTGATGCATGAG 60.788 45.833 2.46 0.00 0.00 2.90
1871 1901 4.260907 CGGTAGACAATTTGATGCATGAGG 60.261 45.833 2.46 0.00 0.00 3.86
1872 1902 4.037208 GGTAGACAATTTGATGCATGAGGG 59.963 45.833 2.46 0.00 0.00 4.30
1873 1903 2.429610 AGACAATTTGATGCATGAGGGC 59.570 45.455 2.46 0.00 0.00 5.19
1874 1904 1.483415 ACAATTTGATGCATGAGGGCC 59.517 47.619 2.46 0.00 0.00 5.80
1875 1905 1.125633 AATTTGATGCATGAGGGCCC 58.874 50.000 16.46 16.46 0.00 5.80
1876 1906 0.031917 ATTTGATGCATGAGGGCCCA 60.032 50.000 27.56 3.72 0.00 5.36
1877 1907 0.971959 TTTGATGCATGAGGGCCCAC 60.972 55.000 27.56 20.25 0.00 4.61
1878 1908 1.866483 TTGATGCATGAGGGCCCACT 61.866 55.000 27.56 2.92 0.00 4.00
1879 1909 1.527844 GATGCATGAGGGCCCACTC 60.528 63.158 27.56 15.05 37.99 3.51
1880 1910 2.972892 GATGCATGAGGGCCCACTCC 62.973 65.000 27.56 10.65 36.66 3.85
1881 1911 3.731728 GCATGAGGGCCCACTCCA 61.732 66.667 27.56 16.41 36.66 3.86
1882 1912 3.089838 CATGAGGGCCCACTCCAA 58.910 61.111 27.56 1.02 36.66 3.53
1883 1913 1.383799 CATGAGGGCCCACTCCAAA 59.616 57.895 27.56 0.56 36.66 3.28
1884 1914 0.032813 CATGAGGGCCCACTCCAAAT 60.033 55.000 27.56 3.50 36.66 2.32
1885 1915 0.712380 ATGAGGGCCCACTCCAAATT 59.288 50.000 27.56 0.00 36.66 1.82
1886 1916 0.486879 TGAGGGCCCACTCCAAATTT 59.513 50.000 27.56 0.00 36.66 1.82
1887 1917 1.132881 TGAGGGCCCACTCCAAATTTT 60.133 47.619 27.56 0.00 36.66 1.82
1888 1918 2.110899 TGAGGGCCCACTCCAAATTTTA 59.889 45.455 27.56 0.00 36.66 1.52
1889 1919 3.169908 GAGGGCCCACTCCAAATTTTAA 58.830 45.455 27.56 0.00 0.00 1.52
1890 1920 3.173151 AGGGCCCACTCCAAATTTTAAG 58.827 45.455 27.56 0.00 0.00 1.85
1891 1921 2.903784 GGGCCCACTCCAAATTTTAAGT 59.096 45.455 19.95 0.00 0.00 2.24
1892 1922 3.056107 GGGCCCACTCCAAATTTTAAGTC 60.056 47.826 19.95 0.00 0.00 3.01
1893 1923 3.576550 GGCCCACTCCAAATTTTAAGTCA 59.423 43.478 0.00 0.00 0.00 3.41
1894 1924 4.222810 GGCCCACTCCAAATTTTAAGTCAT 59.777 41.667 0.00 0.00 0.00 3.06
1895 1925 5.279960 GGCCCACTCCAAATTTTAAGTCATT 60.280 40.000 0.00 0.00 0.00 2.57
1896 1926 5.869344 GCCCACTCCAAATTTTAAGTCATTC 59.131 40.000 0.00 0.00 0.00 2.67
1897 1927 6.092748 CCCACTCCAAATTTTAAGTCATTCG 58.907 40.000 0.00 0.00 0.00 3.34
1898 1928 6.092748 CCACTCCAAATTTTAAGTCATTCGG 58.907 40.000 0.00 0.00 0.00 4.30
1899 1929 6.072175 CCACTCCAAATTTTAAGTCATTCGGA 60.072 38.462 0.00 0.00 0.00 4.55
1909 1939 2.299993 GTCATTCGGACATCTGAGCA 57.700 50.000 0.00 0.00 46.19 4.26
1910 1940 2.200067 GTCATTCGGACATCTGAGCAG 58.800 52.381 0.00 0.00 46.19 4.24
1911 1941 0.935898 CATTCGGACATCTGAGCAGC 59.064 55.000 0.00 0.00 32.05 5.25
1912 1942 0.829333 ATTCGGACATCTGAGCAGCT 59.171 50.000 0.00 0.00 32.05 4.24
1913 1943 0.174389 TTCGGACATCTGAGCAGCTC 59.826 55.000 16.21 16.21 32.05 4.09
1914 1944 0.682532 TCGGACATCTGAGCAGCTCT 60.683 55.000 23.15 2.04 0.00 4.09
1915 1945 0.248990 CGGACATCTGAGCAGCTCTC 60.249 60.000 23.15 11.57 42.23 3.20
1922 1952 3.711937 TGAGCAGCTCTCAGCAAAA 57.288 47.368 23.15 0.00 46.34 2.44
1923 1953 1.971481 TGAGCAGCTCTCAGCAAAAA 58.029 45.000 23.15 0.00 46.34 1.94
1944 1974 7.967890 AAAAAGATAAATCAGGCCAAAACAG 57.032 32.000 5.01 0.00 0.00 3.16
1945 1975 6.670695 AAAGATAAATCAGGCCAAAACAGT 57.329 33.333 5.01 0.00 0.00 3.55
1946 1976 7.775053 AAAGATAAATCAGGCCAAAACAGTA 57.225 32.000 5.01 0.00 0.00 2.74
1947 1977 6.759497 AGATAAATCAGGCCAAAACAGTAC 57.241 37.500 5.01 0.00 0.00 2.73
1948 1978 6.245408 AGATAAATCAGGCCAAAACAGTACA 58.755 36.000 5.01 0.00 0.00 2.90
1949 1979 6.891908 AGATAAATCAGGCCAAAACAGTACAT 59.108 34.615 5.01 0.00 0.00 2.29
1950 1980 4.789012 AATCAGGCCAAAACAGTACATG 57.211 40.909 5.01 0.00 0.00 3.21
1951 1981 3.500448 TCAGGCCAAAACAGTACATGA 57.500 42.857 5.01 0.00 0.00 3.07
1952 1982 3.826524 TCAGGCCAAAACAGTACATGAA 58.173 40.909 5.01 0.00 0.00 2.57
1953 1983 3.568007 TCAGGCCAAAACAGTACATGAAC 59.432 43.478 5.01 0.00 0.00 3.18
1954 1984 3.317711 CAGGCCAAAACAGTACATGAACA 59.682 43.478 5.01 0.00 0.00 3.18
1955 1985 3.957497 AGGCCAAAACAGTACATGAACAA 59.043 39.130 5.01 0.00 0.00 2.83
1956 1986 4.588528 AGGCCAAAACAGTACATGAACAAT 59.411 37.500 5.01 0.00 0.00 2.71
1957 1987 5.772672 AGGCCAAAACAGTACATGAACAATA 59.227 36.000 5.01 0.00 0.00 1.90
1958 1988 6.266558 AGGCCAAAACAGTACATGAACAATAA 59.733 34.615 5.01 0.00 0.00 1.40
1959 1989 6.926272 GGCCAAAACAGTACATGAACAATAAA 59.074 34.615 0.00 0.00 0.00 1.40
1960 1990 7.439655 GGCCAAAACAGTACATGAACAATAAAA 59.560 33.333 0.00 0.00 0.00 1.52
1961 1991 8.821894 GCCAAAACAGTACATGAACAATAAAAA 58.178 29.630 0.00 0.00 0.00 1.94
1984 2014 8.721133 AAAAATTACAGACCCCTAATTTGTCT 57.279 30.769 0.00 0.00 39.86 3.41
1985 2015 8.721133 AAAATTACAGACCCCTAATTTGTCTT 57.279 30.769 0.00 0.00 37.25 3.01
1986 2016 8.721133 AAATTACAGACCCCTAATTTGTCTTT 57.279 30.769 0.00 0.00 37.25 2.52
1987 2017 8.721133 AATTACAGACCCCTAATTTGTCTTTT 57.279 30.769 0.00 0.00 37.25 2.27
1988 2018 8.721133 ATTACAGACCCCTAATTTGTCTTTTT 57.279 30.769 0.00 0.00 37.25 1.94
2011 2041 1.774110 TGAGAGCTCCTCAGATGTCC 58.226 55.000 10.93 0.00 46.38 4.02
2012 2042 1.006400 TGAGAGCTCCTCAGATGTCCA 59.994 52.381 10.93 0.00 46.38 4.02
2013 2043 2.106566 GAGAGCTCCTCAGATGTCCAA 58.893 52.381 10.93 0.00 41.58 3.53
2014 2044 2.499289 GAGAGCTCCTCAGATGTCCAAA 59.501 50.000 10.93 0.00 41.58 3.28
2015 2045 3.113824 AGAGCTCCTCAGATGTCCAAAT 58.886 45.455 10.93 0.00 32.06 2.32
2016 2046 3.118334 AGAGCTCCTCAGATGTCCAAATG 60.118 47.826 10.93 0.00 32.06 2.32
2017 2047 2.842496 AGCTCCTCAGATGTCCAAATGA 59.158 45.455 0.00 0.00 0.00 2.57
2018 2048 3.458857 AGCTCCTCAGATGTCCAAATGAT 59.541 43.478 0.00 0.00 0.00 2.45
2019 2049 4.079901 AGCTCCTCAGATGTCCAAATGATT 60.080 41.667 0.00 0.00 0.00 2.57
2020 2050 4.643784 GCTCCTCAGATGTCCAAATGATTT 59.356 41.667 0.00 0.00 0.00 2.17
2021 2051 5.824624 GCTCCTCAGATGTCCAAATGATTTA 59.175 40.000 0.00 0.00 0.00 1.40
2022 2052 6.319658 GCTCCTCAGATGTCCAAATGATTTAA 59.680 38.462 0.00 0.00 0.00 1.52
2023 2053 7.148018 GCTCCTCAGATGTCCAAATGATTTAAA 60.148 37.037 0.00 0.00 0.00 1.52
2024 2054 8.648698 TCCTCAGATGTCCAAATGATTTAAAA 57.351 30.769 0.00 0.00 0.00 1.52
2025 2055 9.258629 TCCTCAGATGTCCAAATGATTTAAAAT 57.741 29.630 0.00 0.00 0.00 1.82
2026 2056 9.880157 CCTCAGATGTCCAAATGATTTAAAATT 57.120 29.630 0.00 0.00 0.00 1.82
2028 2058 9.656040 TCAGATGTCCAAATGATTTAAAATTGG 57.344 29.630 14.47 14.47 41.47 3.16
2029 2059 9.656040 CAGATGTCCAAATGATTTAAAATTGGA 57.344 29.630 17.29 17.29 45.33 3.53
2033 2063 6.105333 TCCAAATGATTTAAAATTGGAGCGG 58.895 36.000 17.29 3.93 43.33 5.52
2034 2064 6.071108 TCCAAATGATTTAAAATTGGAGCGGA 60.071 34.615 17.29 5.68 43.33 5.54
2035 2065 6.035975 CCAAATGATTTAAAATTGGAGCGGAC 59.964 38.462 15.10 0.00 42.46 4.79
2036 2066 4.712122 TGATTTAAAATTGGAGCGGACC 57.288 40.909 0.00 0.00 0.00 4.46
2037 2067 4.340617 TGATTTAAAATTGGAGCGGACCT 58.659 39.130 0.00 0.00 0.00 3.85
2038 2068 4.157656 TGATTTAAAATTGGAGCGGACCTG 59.842 41.667 0.00 0.00 0.00 4.00
2039 2069 3.426787 TTAAAATTGGAGCGGACCTGA 57.573 42.857 0.00 0.00 0.00 3.86
2040 2070 1.534729 AAAATTGGAGCGGACCTGAC 58.465 50.000 0.00 0.00 0.00 3.51
2041 2071 0.673644 AAATTGGAGCGGACCTGACG 60.674 55.000 0.00 0.00 0.00 4.35
2048 2078 4.277239 CGGACCTGACGCATCAAA 57.723 55.556 0.00 0.00 33.30 2.69
2049 2079 2.767536 CGGACCTGACGCATCAAAT 58.232 52.632 0.00 0.00 33.30 2.32
2050 2080 1.086696 CGGACCTGACGCATCAAATT 58.913 50.000 0.00 0.00 33.30 1.82
2051 2081 1.202065 CGGACCTGACGCATCAAATTG 60.202 52.381 0.00 0.00 33.30 2.32
2052 2082 1.812571 GGACCTGACGCATCAAATTGT 59.187 47.619 0.00 0.00 33.30 2.71
2053 2083 2.159517 GGACCTGACGCATCAAATTGTC 60.160 50.000 0.00 0.00 33.30 3.18
2054 2084 2.744202 GACCTGACGCATCAAATTGTCT 59.256 45.455 0.00 0.00 33.30 3.41
2055 2085 3.932710 GACCTGACGCATCAAATTGTCTA 59.067 43.478 0.00 0.00 33.30 2.59
2056 2086 3.684788 ACCTGACGCATCAAATTGTCTAC 59.315 43.478 0.00 0.00 33.30 2.59
2057 2087 3.063997 CCTGACGCATCAAATTGTCTACC 59.936 47.826 0.00 0.00 33.30 3.18
2058 2088 3.669536 TGACGCATCAAATTGTCTACCA 58.330 40.909 0.00 0.00 32.64 3.25
2059 2089 3.435327 TGACGCATCAAATTGTCTACCAC 59.565 43.478 0.00 0.00 32.64 4.16
2060 2090 3.407698 ACGCATCAAATTGTCTACCACA 58.592 40.909 0.00 0.00 0.00 4.17
2061 2091 3.188460 ACGCATCAAATTGTCTACCACAC 59.812 43.478 0.00 0.00 33.41 3.82
2062 2092 3.188254 CGCATCAAATTGTCTACCACACA 59.812 43.478 0.00 0.00 33.41 3.72
2063 2093 4.320129 CGCATCAAATTGTCTACCACACAA 60.320 41.667 0.00 0.00 38.12 3.33
2064 2094 5.527951 GCATCAAATTGTCTACCACACAAA 58.472 37.500 0.00 0.00 37.30 2.83
2065 2095 5.982516 GCATCAAATTGTCTACCACACAAAA 59.017 36.000 0.00 0.00 37.30 2.44
2066 2096 6.478344 GCATCAAATTGTCTACCACACAAAAA 59.522 34.615 0.00 0.00 37.30 1.94
2115 2145 2.589442 TTTTTCGTCAGCGCGGGT 60.589 55.556 8.83 0.00 38.14 5.28
2116 2146 2.887889 TTTTTCGTCAGCGCGGGTG 61.888 57.895 8.83 4.70 38.14 4.61
2124 2154 4.827087 AGCGCGGGTGCAGATGAG 62.827 66.667 8.83 0.00 42.97 2.90
2126 2156 4.827087 CGCGGGTGCAGATGAGCT 62.827 66.667 0.00 0.00 42.97 4.09
2127 2157 2.894387 GCGGGTGCAGATGAGCTC 60.894 66.667 6.82 6.82 42.15 4.09
2128 2158 2.584418 CGGGTGCAGATGAGCTCG 60.584 66.667 9.64 0.00 34.99 5.03
2129 2159 2.202987 GGGTGCAGATGAGCTCGG 60.203 66.667 9.64 0.00 34.99 4.63
2130 2160 2.202987 GGTGCAGATGAGCTCGGG 60.203 66.667 9.64 0.00 34.99 5.14
2131 2161 2.581354 GTGCAGATGAGCTCGGGT 59.419 61.111 9.64 0.00 34.99 5.28
2132 2162 1.812922 GTGCAGATGAGCTCGGGTG 60.813 63.158 9.64 6.93 34.99 4.61
2133 2163 2.894387 GCAGATGAGCTCGGGTGC 60.894 66.667 15.62 15.62 0.00 5.01
2134 2164 2.580815 CAGATGAGCTCGGGTGCA 59.419 61.111 9.64 0.00 34.99 4.57
2135 2165 1.521010 CAGATGAGCTCGGGTGCAG 60.521 63.158 9.64 0.00 34.99 4.41
2136 2166 1.683707 AGATGAGCTCGGGTGCAGA 60.684 57.895 9.64 0.00 34.99 4.26
2137 2167 1.227205 GATGAGCTCGGGTGCAGAG 60.227 63.158 9.64 0.00 38.68 3.35
2138 2168 1.670949 GATGAGCTCGGGTGCAGAGA 61.671 60.000 9.64 0.00 37.93 3.10
2139 2169 1.047596 ATGAGCTCGGGTGCAGAGAT 61.048 55.000 9.64 0.00 37.93 2.75
2140 2170 1.227205 GAGCTCGGGTGCAGAGATG 60.227 63.158 0.00 0.00 37.93 2.90
2141 2171 2.202987 GCTCGGGTGCAGAGATGG 60.203 66.667 5.67 0.00 37.93 3.51
2142 2172 2.725312 GCTCGGGTGCAGAGATGGA 61.725 63.158 5.67 0.00 37.93 3.41
2143 2173 2.037620 GCTCGGGTGCAGAGATGGAT 62.038 60.000 5.67 0.00 37.93 3.41
2144 2174 0.467384 CTCGGGTGCAGAGATGGATT 59.533 55.000 0.00 0.00 37.93 3.01
2145 2175 0.911769 TCGGGTGCAGAGATGGATTT 59.088 50.000 0.00 0.00 0.00 2.17
2146 2176 1.281867 TCGGGTGCAGAGATGGATTTT 59.718 47.619 0.00 0.00 0.00 1.82
2147 2177 2.094675 CGGGTGCAGAGATGGATTTTT 58.905 47.619 0.00 0.00 0.00 1.94
2174 2204 8.122330 GCACGAATATTCACAAATCATAGAACA 58.878 33.333 15.57 0.00 0.00 3.18
2207 2237 3.008049 CCACTAGGGTAACACTGAGCTTT 59.992 47.826 0.00 0.00 39.74 3.51
2332 2362 6.296435 AGGGAAGATATTACTAGTGACCCT 57.704 41.667 5.39 5.56 39.05 4.34
2379 2409 3.304123 GCAGCTCATCTTCTCATTCATGC 60.304 47.826 0.00 0.00 0.00 4.06
2396 2426 2.109126 GCCGAGCCATCACTGGAAC 61.109 63.158 0.00 0.00 46.37 3.62
2411 2441 6.299141 TCACTGGAACAAGCTATCTCTTTTT 58.701 36.000 0.00 0.00 38.70 1.94
2419 2449 5.048434 ACAAGCTATCTCTTTTTCAAGGCAC 60.048 40.000 0.00 0.00 0.00 5.01
2426 2456 4.520492 TCTCTTTTTCAAGGCACCATCTTC 59.480 41.667 0.00 0.00 0.00 2.87
2460 2490 3.579151 GACACTCTCAAGTCCCCTTTAGT 59.421 47.826 0.00 0.00 31.71 2.24
2494 2524 0.174162 GTGCCCTTCACATGCCATTC 59.826 55.000 0.00 0.00 44.98 2.67
2606 2636 6.665248 AGCAAAGCTGGATTTTAACCTTCTAT 59.335 34.615 0.00 0.00 37.57 1.98
2629 2659 2.227388 GCATGTCCACTTGAAGGAACTG 59.773 50.000 0.00 0.00 40.86 3.16
2825 2873 2.000447 GGTGGCGTGATCTTTACAGAC 59.000 52.381 0.00 0.00 0.00 3.51
2929 2977 5.062934 TGCGTTGTCCAGAATATTTCTTACG 59.937 40.000 0.00 0.00 38.11 3.18
2965 3013 2.401583 TTTCCCTGATGGATGACACG 57.598 50.000 0.00 0.00 44.66 4.49
3078 3126 8.310406 TGTGTCAAGAACTAACATACAATCAG 57.690 34.615 0.00 0.00 0.00 2.90
3245 3321 0.679960 GTTGCCTATGCCCGGAAAGT 60.680 55.000 0.73 0.00 36.33 2.66
3405 3482 3.638160 ACAAGCCAAGCTTCAAAGATCAA 59.362 39.130 0.00 0.00 46.77 2.57
3523 3600 2.355716 GCAGCTGGTTACCCTAATGTCA 60.356 50.000 17.12 0.00 0.00 3.58
3632 3711 3.061848 GCATCAACCACCACCGGG 61.062 66.667 6.32 0.00 41.29 5.73
3634 3713 1.074072 CATCAACCACCACCGGGAA 59.926 57.895 6.32 0.00 38.05 3.97
3701 3783 2.632537 GGGAAGGCCAAGGGAGATATA 58.367 52.381 5.01 0.00 35.15 0.86
3702 3784 2.986728 GGGAAGGCCAAGGGAGATATAA 59.013 50.000 5.01 0.00 35.15 0.98
3788 3870 5.078411 TCCTTTCACTGCTAGAAGATGAC 57.922 43.478 4.16 0.00 0.00 3.06
3830 3912 3.202097 TCTCTTTCAACATCACGCACAA 58.798 40.909 0.00 0.00 0.00 3.33
3837 3919 1.374125 CATCACGCACAACTCCCGA 60.374 57.895 0.00 0.00 0.00 5.14
3911 3993 7.174599 GCTGAGAAAGATGCATATACCTTCAAT 59.825 37.037 0.00 0.00 0.00 2.57
4182 4342 8.870160 TCATTGTACAAAAAGAACTCCATTTG 57.130 30.769 13.23 1.16 38.42 2.32
4206 4366 5.154222 CCGCAATGGAGTACTTTTTCTTTC 58.846 41.667 0.00 0.00 42.00 2.62
4223 4383 1.882308 TTCCGGGGCATAAGTCCTTA 58.118 50.000 0.00 0.00 40.27 2.69
4228 4388 3.181443 CCGGGGCATAAGTCCTTAAAGAT 60.181 47.826 0.00 0.00 40.27 2.40
4299 4459 6.018669 GTGAGAATACCCTTTTATCTTGCTCG 60.019 42.308 0.00 0.00 0.00 5.03
4305 4465 2.487762 CCTTTTATCTTGCTCGGCAACA 59.512 45.455 7.15 0.00 43.99 3.33
4329 4489 5.702349 TGTTTGCATCACATTACATGACA 57.298 34.783 0.00 0.00 0.00 3.58
4330 4490 6.270156 TGTTTGCATCACATTACATGACAT 57.730 33.333 0.00 0.00 0.00 3.06
4331 4491 6.689554 TGTTTGCATCACATTACATGACATT 58.310 32.000 0.00 0.00 0.00 2.71
4332 4492 7.153315 TGTTTGCATCACATTACATGACATTT 58.847 30.769 0.00 0.00 0.00 2.32
4338 4498 8.183536 GCATCACATTACATGACATTTCTGTTA 58.816 33.333 0.00 0.00 35.14 2.41
4389 4549 0.670239 ACGCACACGCAAGATCATGA 60.670 50.000 1.25 0.00 45.53 3.07
4516 4676 1.203052 GACCGATCCAAGTACCGAACA 59.797 52.381 0.00 0.00 0.00 3.18
4568 4728 2.260743 GGTGACGTCCCTCGAACC 59.739 66.667 14.12 8.96 42.86 3.62
4587 4747 1.672854 CCCGATCCAGCCGAGTGTTA 61.673 60.000 0.00 0.00 0.00 2.41
4647 4807 0.454600 GATGTTCTACCGACGCAGGA 59.545 55.000 3.59 0.00 34.73 3.86
4795 4957 2.876858 AGTGGAGGAGGGGGAGGT 60.877 66.667 0.00 0.00 0.00 3.85
4869 5032 3.904965 GGATTCCCCCTTTCCTAGTAGAG 59.095 52.174 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.296854 AGGGTAAGCTCATGTCATACGA 58.703 45.455 0.00 0.00 0.00 3.43
37 38 4.081642 TCGAGGACCGATTTGAGAAGAAAT 60.082 41.667 0.00 0.00 43.23 2.17
77 78 2.632377 CACCATCGTAGGCTGACAAAT 58.368 47.619 0.00 0.00 0.00 2.32
221 222 9.632807 CTATTTGAACAATTGACCGGATTAAAA 57.367 29.630 13.59 1.00 0.00 1.52
227 228 3.442273 GCCTATTTGAACAATTGACCGGA 59.558 43.478 13.59 0.00 0.00 5.14
524 527 3.590311 CGCGCTAATAGTTTGTAAACGG 58.410 45.455 5.56 0.00 43.51 4.44
525 528 3.017576 GCGCGCTAATAGTTTGTAAACG 58.982 45.455 26.67 0.00 43.51 3.60
526 529 4.254745 AGCGCGCTAATAGTTTGTAAAC 57.745 40.909 35.79 0.00 39.17 2.01
527 530 3.000476 CGAGCGCGCTAATAGTTTGTAAA 60.000 43.478 36.69 0.00 0.00 2.01
528 531 2.532723 CGAGCGCGCTAATAGTTTGTAA 59.467 45.455 36.69 0.00 0.00 2.41
529 532 2.114056 CGAGCGCGCTAATAGTTTGTA 58.886 47.619 36.69 0.00 0.00 2.41
530 533 0.921347 CGAGCGCGCTAATAGTTTGT 59.079 50.000 36.69 7.97 0.00 2.83
531 534 0.229753 CCGAGCGCGCTAATAGTTTG 59.770 55.000 36.69 14.31 35.83 2.93
532 535 1.488261 GCCGAGCGCGCTAATAGTTT 61.488 55.000 36.69 9.84 35.83 2.66
533 536 1.949631 GCCGAGCGCGCTAATAGTT 60.950 57.895 36.69 10.80 35.83 2.24
534 537 2.354773 GCCGAGCGCGCTAATAGT 60.355 61.111 36.69 11.74 35.83 2.12
535 538 1.880601 CTTGCCGAGCGCGCTAATAG 61.881 60.000 36.69 23.99 42.08 1.73
536 539 1.949133 CTTGCCGAGCGCGCTAATA 60.949 57.895 36.69 18.03 42.08 0.98
537 540 3.264897 CTTGCCGAGCGCGCTAAT 61.265 61.111 36.69 13.67 42.08 1.73
545 548 3.622060 TAACCTGCCCTTGCCGAGC 62.622 63.158 0.00 0.00 36.33 5.03
546 549 1.745489 GTAACCTGCCCTTGCCGAG 60.745 63.158 0.00 0.00 36.33 4.63
547 550 2.349755 GTAACCTGCCCTTGCCGA 59.650 61.111 0.00 0.00 36.33 5.54
548 551 2.033448 TGTAACCTGCCCTTGCCG 59.967 61.111 0.00 0.00 36.33 5.69
549 552 2.332654 CGTGTAACCTGCCCTTGCC 61.333 63.158 0.00 0.00 36.33 4.52
550 553 1.302192 TCGTGTAACCTGCCCTTGC 60.302 57.895 0.00 0.00 38.26 4.01
551 554 0.250124 TGTCGTGTAACCTGCCCTTG 60.250 55.000 0.00 0.00 0.00 3.61
552 555 0.470766 TTGTCGTGTAACCTGCCCTT 59.529 50.000 0.00 0.00 0.00 3.95
553 556 0.034896 CTTGTCGTGTAACCTGCCCT 59.965 55.000 0.00 0.00 0.00 5.19
554 557 0.250166 ACTTGTCGTGTAACCTGCCC 60.250 55.000 0.00 0.00 0.00 5.36
555 558 1.145803 GACTTGTCGTGTAACCTGCC 58.854 55.000 0.00 0.00 0.00 4.85
556 559 0.782384 CGACTTGTCGTGTAACCTGC 59.218 55.000 14.18 0.00 0.00 4.85
557 560 2.049228 GTCGACTTGTCGTGTAACCTG 58.951 52.381 20.30 0.00 0.00 4.00
558 561 1.677576 TGTCGACTTGTCGTGTAACCT 59.322 47.619 17.92 0.00 0.00 3.50
559 562 2.124011 TGTCGACTTGTCGTGTAACC 57.876 50.000 17.92 6.10 0.00 2.85
560 563 2.098211 CGTTGTCGACTTGTCGTGTAAC 60.098 50.000 17.92 19.50 39.71 2.50
561 564 2.110990 CGTTGTCGACTTGTCGTGTAA 58.889 47.619 17.92 12.20 39.71 2.41
562 565 1.330213 TCGTTGTCGACTTGTCGTGTA 59.670 47.619 17.92 7.60 41.35 2.90
563 566 0.099259 TCGTTGTCGACTTGTCGTGT 59.901 50.000 17.92 0.00 41.35 4.49
564 567 2.862700 TCGTTGTCGACTTGTCGTG 58.137 52.632 17.92 8.68 41.35 4.35
573 576 3.337358 TCATGTAGTAGGTCGTTGTCGA 58.663 45.455 0.00 0.00 44.12 4.20
586 589 1.276421 AGGCTCTTGCGTTCATGTAGT 59.724 47.619 0.00 0.00 40.82 2.73
594 597 1.893808 CACACCAGGCTCTTGCGTT 60.894 57.895 0.00 0.00 40.82 4.84
598 601 0.325933 TCATCCACACCAGGCTCTTG 59.674 55.000 0.00 0.00 0.00 3.02
625 628 1.374758 CAGTGAACTGTCGGCCTCC 60.375 63.158 0.00 0.00 39.09 4.30
629 632 0.946221 CCACTCAGTGAACTGTCGGC 60.946 60.000 6.30 0.00 44.12 5.54
630 633 0.389391 ACCACTCAGTGAACTGTCGG 59.611 55.000 6.30 10.92 44.12 4.79
631 634 1.491670 CACCACTCAGTGAACTGTCG 58.508 55.000 6.30 5.82 44.12 4.35
632 635 1.412710 TCCACCACTCAGTGAACTGTC 59.587 52.381 6.30 0.00 44.12 3.51
633 636 1.414181 CTCCACCACTCAGTGAACTGT 59.586 52.381 6.30 0.00 44.12 3.55
636 639 0.759346 ACCTCCACCACTCAGTGAAC 59.241 55.000 6.30 0.00 40.34 3.18
638 641 2.158370 TCTAACCTCCACCACTCAGTGA 60.158 50.000 6.30 0.00 40.34 3.41
641 644 1.202582 CGTCTAACCTCCACCACTCAG 59.797 57.143 0.00 0.00 0.00 3.35
646 649 1.888512 GTGTACGTCTAACCTCCACCA 59.111 52.381 0.00 0.00 0.00 4.17
666 671 9.342308 TGGAGCTTTTATATAGGAAAGATGTTG 57.658 33.333 9.99 0.00 35.41 3.33
673 678 8.448008 ACATCCATGGAGCTTTTATATAGGAAA 58.552 33.333 21.33 0.00 0.00 3.13
729 734 2.300152 TGACTTGTGACCTAGGAAGCAG 59.700 50.000 17.98 6.97 0.00 4.24
760 765 4.629634 CACTGCCATCGTGTAATGAGTTTA 59.370 41.667 0.00 0.00 33.81 2.01
764 769 2.862536 CTCACTGCCATCGTGTAATGAG 59.137 50.000 0.00 0.00 33.81 2.90
773 778 0.439985 CGTCAAACTCACTGCCATCG 59.560 55.000 0.00 0.00 0.00 3.84
791 796 4.114997 GGATTGGCGGTGTTGGCG 62.115 66.667 0.00 0.00 37.19 5.69
798 803 0.618458 TGCTAAAGAGGATTGGCGGT 59.382 50.000 0.00 0.00 39.40 5.68
800 805 1.401905 GGTTGCTAAAGAGGATTGGCG 59.598 52.381 0.00 0.00 39.40 5.69
818 823 0.915364 GGCAGATGAGAAGAAGGGGT 59.085 55.000 0.00 0.00 0.00 4.95
824 829 0.826062 TGCGATGGCAGATGAGAAGA 59.174 50.000 0.00 0.00 46.21 2.87
847 852 0.179161 CGAGAGGAGTAGTTGCCACG 60.179 60.000 0.00 0.00 0.00 4.94
861 866 1.134175 GCTTGGAGAGGAAGACGAGAG 59.866 57.143 0.00 0.00 0.00 3.20
870 875 1.786937 GAGGAGATGCTTGGAGAGGA 58.213 55.000 0.00 0.00 0.00 3.71
898 903 0.033208 GATGCTTGGACATGGGGGAA 60.033 55.000 0.00 0.00 0.00 3.97
960 965 7.830697 TCATCATAATCCACATCTGTTGTTTCT 59.169 33.333 0.00 0.00 36.00 2.52
974 979 3.466836 GGAGCAACGTCATCATAATCCA 58.533 45.455 0.00 0.00 0.00 3.41
978 983 3.055458 TCTTGGGAGCAACGTCATCATAA 60.055 43.478 0.00 0.00 0.00 1.90
989 994 1.144708 TGGACAACATCTTGGGAGCAA 59.855 47.619 0.00 0.00 0.00 3.91
996 1001 2.947652 CCCATAGCTGGACAACATCTTG 59.052 50.000 0.00 0.00 46.37 3.02
1080 1085 7.681939 AAGCAAATTATATGTATACGTGGGG 57.318 36.000 7.89 0.00 0.00 4.96
1127 1132 3.334691 TCTTGATTGGTGATGTTCGTCC 58.665 45.455 0.00 0.00 0.00 4.79
1128 1133 6.851222 ATATCTTGATTGGTGATGTTCGTC 57.149 37.500 0.00 0.00 0.00 4.20
1130 1135 7.475015 ACAAATATCTTGATTGGTGATGTTCG 58.525 34.615 5.11 0.00 0.00 3.95
1358 1379 8.766994 AAAGTAATAGGTATGCCATTTGTGAT 57.233 30.769 1.54 0.00 37.19 3.06
1411 1441 4.512944 CACGAATGCATTGATTAGCTAGGT 59.487 41.667 18.59 0.00 0.00 3.08
1451 1481 2.686915 CCTTGCACTCATCCATTTCTCC 59.313 50.000 0.00 0.00 0.00 3.71
1472 1502 3.127030 CGTCCTCCTTTAATTTGTCAGCC 59.873 47.826 0.00 0.00 0.00 4.85
1496 1526 5.826601 TGCAACTCTTAAACAACATGTCA 57.173 34.783 0.00 0.00 0.00 3.58
1525 1555 6.661805 GTCCAATAAGGTTATTCTTTCCACCA 59.338 38.462 0.00 0.00 39.02 4.17
1565 1595 9.958180 TGTTTCTTAAAGTGATGATCTATTCCA 57.042 29.630 0.00 0.00 0.00 3.53
1745 1775 3.637998 TCGCCCTACTCATATTCGTTC 57.362 47.619 0.00 0.00 0.00 3.95
1746 1776 4.038763 TGAATCGCCCTACTCATATTCGTT 59.961 41.667 0.00 0.00 0.00 3.85
1747 1777 3.572682 TGAATCGCCCTACTCATATTCGT 59.427 43.478 0.00 0.00 0.00 3.85
1748 1778 4.169508 CTGAATCGCCCTACTCATATTCG 58.830 47.826 0.00 0.00 0.00 3.34
1749 1779 4.926238 CACTGAATCGCCCTACTCATATTC 59.074 45.833 0.00 0.00 0.00 1.75
1750 1780 4.800914 GCACTGAATCGCCCTACTCATATT 60.801 45.833 0.00 0.00 0.00 1.28
1751 1781 3.306364 GCACTGAATCGCCCTACTCATAT 60.306 47.826 0.00 0.00 0.00 1.78
1752 1782 2.035961 GCACTGAATCGCCCTACTCATA 59.964 50.000 0.00 0.00 0.00 2.15
1753 1783 1.202580 GCACTGAATCGCCCTACTCAT 60.203 52.381 0.00 0.00 0.00 2.90
1754 1784 0.175760 GCACTGAATCGCCCTACTCA 59.824 55.000 0.00 0.00 0.00 3.41
1755 1785 0.530870 GGCACTGAATCGCCCTACTC 60.531 60.000 0.00 0.00 42.82 2.59
1756 1786 1.522569 GGCACTGAATCGCCCTACT 59.477 57.895 0.00 0.00 42.82 2.57
1757 1787 4.126524 GGCACTGAATCGCCCTAC 57.873 61.111 0.00 0.00 42.82 3.18
1762 1792 3.512516 GCCTGGGCACTGAATCGC 61.513 66.667 6.75 0.00 41.49 4.58
1763 1793 1.817099 GAGCCTGGGCACTGAATCG 60.817 63.158 14.39 0.00 44.88 3.34
1764 1794 0.106819 ATGAGCCTGGGCACTGAATC 60.107 55.000 14.39 2.15 44.88 2.52
1765 1795 0.106819 GATGAGCCTGGGCACTGAAT 60.107 55.000 14.39 0.00 44.88 2.57
1766 1796 1.203441 AGATGAGCCTGGGCACTGAA 61.203 55.000 14.39 0.00 44.88 3.02
1767 1797 0.325577 TAGATGAGCCTGGGCACTGA 60.326 55.000 14.39 0.00 44.88 3.41
1768 1798 0.179062 GTAGATGAGCCTGGGCACTG 60.179 60.000 14.39 0.00 44.88 3.66
1769 1799 0.618680 TGTAGATGAGCCTGGGCACT 60.619 55.000 14.39 9.44 44.88 4.40
1770 1800 0.462759 GTGTAGATGAGCCTGGGCAC 60.463 60.000 14.39 8.23 44.88 5.01
1771 1801 1.626356 GGTGTAGATGAGCCTGGGCA 61.626 60.000 14.39 0.00 44.88 5.36
1772 1802 1.147153 GGTGTAGATGAGCCTGGGC 59.853 63.158 3.00 3.00 42.33 5.36
1773 1803 1.832912 GGGTGTAGATGAGCCTGGG 59.167 63.158 0.00 0.00 0.00 4.45
1774 1804 1.443407 CGGGTGTAGATGAGCCTGG 59.557 63.158 0.00 0.00 0.00 4.45
1775 1805 1.330655 ACCGGGTGTAGATGAGCCTG 61.331 60.000 6.32 0.00 0.00 4.85
1776 1806 0.617820 AACCGGGTGTAGATGAGCCT 60.618 55.000 6.32 0.00 0.00 4.58
1777 1807 1.068741 CTAACCGGGTGTAGATGAGCC 59.931 57.143 0.00 0.00 0.00 4.70
1778 1808 2.029623 TCTAACCGGGTGTAGATGAGC 58.970 52.381 0.00 0.00 0.00 4.26
1779 1809 4.730949 TTTCTAACCGGGTGTAGATGAG 57.269 45.455 0.00 0.00 0.00 2.90
1780 1810 5.687166 ATTTTCTAACCGGGTGTAGATGA 57.313 39.130 0.00 0.27 0.00 2.92
1781 1811 8.446599 AATTATTTTCTAACCGGGTGTAGATG 57.553 34.615 0.00 0.00 0.00 2.90
1782 1812 8.269317 TGAATTATTTTCTAACCGGGTGTAGAT 58.731 33.333 0.00 0.00 0.00 1.98
1783 1813 7.622713 TGAATTATTTTCTAACCGGGTGTAGA 58.377 34.615 0.00 4.83 0.00 2.59
1784 1814 7.852971 TGAATTATTTTCTAACCGGGTGTAG 57.147 36.000 0.00 2.04 0.00 2.74
1785 1815 9.902684 TTATGAATTATTTTCTAACCGGGTGTA 57.097 29.630 0.00 0.00 0.00 2.90
1786 1816 8.810990 TTATGAATTATTTTCTAACCGGGTGT 57.189 30.769 0.00 0.00 0.00 4.16
1840 1870 5.250235 TCAAATTGTCTACCGCACAAAAA 57.750 34.783 0.00 0.00 37.30 1.94
1841 1871 4.902443 TCAAATTGTCTACCGCACAAAA 57.098 36.364 0.00 0.00 37.30 2.44
1842 1872 4.793071 CATCAAATTGTCTACCGCACAAA 58.207 39.130 0.00 0.00 37.30 2.83
1843 1873 3.365868 GCATCAAATTGTCTACCGCACAA 60.366 43.478 0.00 0.00 38.12 3.33
1844 1874 2.161410 GCATCAAATTGTCTACCGCACA 59.839 45.455 0.00 0.00 0.00 4.57
1845 1875 2.161410 TGCATCAAATTGTCTACCGCAC 59.839 45.455 0.00 0.00 0.00 5.34
1846 1876 2.431454 TGCATCAAATTGTCTACCGCA 58.569 42.857 0.00 0.00 0.00 5.69
1847 1877 3.065233 TCATGCATCAAATTGTCTACCGC 59.935 43.478 0.00 0.00 0.00 5.68
1848 1878 4.260907 CCTCATGCATCAAATTGTCTACCG 60.261 45.833 0.00 0.00 0.00 4.02
1849 1879 4.037208 CCCTCATGCATCAAATTGTCTACC 59.963 45.833 0.00 0.00 0.00 3.18
1850 1880 4.498682 GCCCTCATGCATCAAATTGTCTAC 60.499 45.833 0.00 0.00 0.00 2.59
1851 1881 3.633525 GCCCTCATGCATCAAATTGTCTA 59.366 43.478 0.00 0.00 0.00 2.59
1852 1882 2.429610 GCCCTCATGCATCAAATTGTCT 59.570 45.455 0.00 0.00 0.00 3.41
1853 1883 2.482490 GGCCCTCATGCATCAAATTGTC 60.482 50.000 0.00 0.00 0.00 3.18
1854 1884 1.483415 GGCCCTCATGCATCAAATTGT 59.517 47.619 0.00 0.00 0.00 2.71
1855 1885 1.202604 GGGCCCTCATGCATCAAATTG 60.203 52.381 17.04 0.00 0.00 2.32
1856 1886 1.125633 GGGCCCTCATGCATCAAATT 58.874 50.000 17.04 0.00 0.00 1.82
1857 1887 0.031917 TGGGCCCTCATGCATCAAAT 60.032 50.000 25.70 0.00 0.00 2.32
1858 1888 0.971959 GTGGGCCCTCATGCATCAAA 60.972 55.000 25.70 0.00 0.00 2.69
1859 1889 1.380246 GTGGGCCCTCATGCATCAA 60.380 57.895 25.70 0.00 0.00 2.57
1860 1890 2.274948 GAGTGGGCCCTCATGCATCA 62.275 60.000 25.70 0.00 0.00 3.07
1861 1891 1.527844 GAGTGGGCCCTCATGCATC 60.528 63.158 25.70 8.87 0.00 3.91
1862 1892 2.599597 GAGTGGGCCCTCATGCAT 59.400 61.111 25.70 2.15 0.00 3.96
1863 1893 3.731728 GGAGTGGGCCCTCATGCA 61.732 66.667 25.70 0.00 32.91 3.96
1864 1894 2.786512 TTTGGAGTGGGCCCTCATGC 62.787 60.000 25.70 14.48 32.91 4.06
1865 1895 0.032813 ATTTGGAGTGGGCCCTCATG 60.033 55.000 25.70 0.00 32.91 3.07
1866 1896 0.712380 AATTTGGAGTGGGCCCTCAT 59.288 50.000 25.70 8.74 32.91 2.90
1867 1897 0.486879 AAATTTGGAGTGGGCCCTCA 59.513 50.000 25.70 13.25 32.91 3.86
1868 1898 1.644509 AAAATTTGGAGTGGGCCCTC 58.355 50.000 25.70 20.95 0.00 4.30
1869 1899 3.173151 CTTAAAATTTGGAGTGGGCCCT 58.827 45.455 25.70 2.15 0.00 5.19
1870 1900 2.903784 ACTTAAAATTTGGAGTGGGCCC 59.096 45.455 17.59 17.59 0.00 5.80
1871 1901 3.576550 TGACTTAAAATTTGGAGTGGGCC 59.423 43.478 10.46 0.00 0.00 5.80
1872 1902 4.864704 TGACTTAAAATTTGGAGTGGGC 57.135 40.909 10.46 0.12 0.00 5.36
1873 1903 6.092748 CGAATGACTTAAAATTTGGAGTGGG 58.907 40.000 10.46 0.00 0.00 4.61
1874 1904 6.072175 TCCGAATGACTTAAAATTTGGAGTGG 60.072 38.462 10.46 6.40 40.12 4.00
1875 1905 6.801862 GTCCGAATGACTTAAAATTTGGAGTG 59.198 38.462 10.46 0.00 43.81 3.51
1876 1906 6.488683 TGTCCGAATGACTTAAAATTTGGAGT 59.511 34.615 11.75 6.45 43.81 3.85
1877 1907 6.908825 TGTCCGAATGACTTAAAATTTGGAG 58.091 36.000 11.75 0.00 43.81 3.86
1878 1908 6.885952 TGTCCGAATGACTTAAAATTTGGA 57.114 33.333 8.92 8.92 44.75 3.53
1879 1909 7.485913 CAGATGTCCGAATGACTTAAAATTTGG 59.514 37.037 0.00 5.59 44.75 3.28
1880 1910 8.236586 TCAGATGTCCGAATGACTTAAAATTTG 58.763 33.333 0.00 0.00 44.75 2.32
1881 1911 8.335532 TCAGATGTCCGAATGACTTAAAATTT 57.664 30.769 0.00 0.00 44.75 1.82
1882 1912 7.414540 GCTCAGATGTCCGAATGACTTAAAATT 60.415 37.037 0.00 0.00 44.75 1.82
1883 1913 6.037610 GCTCAGATGTCCGAATGACTTAAAAT 59.962 38.462 0.00 0.00 44.75 1.82
1884 1914 5.351465 GCTCAGATGTCCGAATGACTTAAAA 59.649 40.000 0.00 0.00 44.75 1.52
1885 1915 4.870426 GCTCAGATGTCCGAATGACTTAAA 59.130 41.667 0.00 0.00 44.75 1.52
1886 1916 4.081697 TGCTCAGATGTCCGAATGACTTAA 60.082 41.667 0.00 0.00 44.75 1.85
1887 1917 3.447229 TGCTCAGATGTCCGAATGACTTA 59.553 43.478 0.00 0.00 44.75 2.24
1888 1918 2.234661 TGCTCAGATGTCCGAATGACTT 59.765 45.455 0.00 0.00 44.75 3.01
1889 1919 1.827344 TGCTCAGATGTCCGAATGACT 59.173 47.619 0.00 0.00 44.75 3.41
1890 1920 2.200067 CTGCTCAGATGTCCGAATGAC 58.800 52.381 0.00 0.00 44.72 3.06
1891 1921 1.472201 GCTGCTCAGATGTCCGAATGA 60.472 52.381 0.29 0.00 0.00 2.57
1892 1922 0.935898 GCTGCTCAGATGTCCGAATG 59.064 55.000 0.29 0.00 0.00 2.67
1893 1923 0.829333 AGCTGCTCAGATGTCCGAAT 59.171 50.000 0.00 0.00 0.00 3.34
1894 1924 0.174389 GAGCTGCTCAGATGTCCGAA 59.826 55.000 24.02 0.00 0.00 4.30
1895 1925 0.682532 AGAGCTGCTCAGATGTCCGA 60.683 55.000 29.49 0.00 32.06 4.55
1896 1926 0.248990 GAGAGCTGCTCAGATGTCCG 60.249 60.000 29.49 0.00 43.38 4.79
1897 1927 3.665544 GAGAGCTGCTCAGATGTCC 57.334 57.895 29.49 2.47 43.38 4.02
1920 1950 7.508687 ACTGTTTTGGCCTGATTTATCTTTTT 58.491 30.769 3.32 0.00 0.00 1.94
1921 1951 7.066307 ACTGTTTTGGCCTGATTTATCTTTT 57.934 32.000 3.32 0.00 0.00 2.27
1922 1952 6.670695 ACTGTTTTGGCCTGATTTATCTTT 57.329 33.333 3.32 0.00 0.00 2.52
1923 1953 6.719370 TGTACTGTTTTGGCCTGATTTATCTT 59.281 34.615 3.32 0.00 0.00 2.40
1924 1954 6.245408 TGTACTGTTTTGGCCTGATTTATCT 58.755 36.000 3.32 0.00 0.00 1.98
1925 1955 6.509418 TGTACTGTTTTGGCCTGATTTATC 57.491 37.500 3.32 0.00 0.00 1.75
1926 1956 6.663093 TCATGTACTGTTTTGGCCTGATTTAT 59.337 34.615 3.32 0.00 0.00 1.40
1927 1957 6.007076 TCATGTACTGTTTTGGCCTGATTTA 58.993 36.000 3.32 0.00 0.00 1.40
1928 1958 4.832266 TCATGTACTGTTTTGGCCTGATTT 59.168 37.500 3.32 0.00 0.00 2.17
1929 1959 4.406456 TCATGTACTGTTTTGGCCTGATT 58.594 39.130 3.32 0.00 0.00 2.57
1930 1960 4.032960 TCATGTACTGTTTTGGCCTGAT 57.967 40.909 3.32 0.00 0.00 2.90
1931 1961 3.500448 TCATGTACTGTTTTGGCCTGA 57.500 42.857 3.32 0.00 0.00 3.86
1932 1962 3.317711 TGTTCATGTACTGTTTTGGCCTG 59.682 43.478 3.32 0.00 0.00 4.85
1933 1963 3.561143 TGTTCATGTACTGTTTTGGCCT 58.439 40.909 3.32 0.00 0.00 5.19
1934 1964 4.314740 TTGTTCATGTACTGTTTTGGCC 57.685 40.909 0.00 0.00 0.00 5.36
1935 1965 7.938563 TTTATTGTTCATGTACTGTTTTGGC 57.061 32.000 4.01 0.00 0.00 4.52
1959 1989 8.721133 AGACAAATTAGGGGTCTGTAATTTTT 57.279 30.769 0.00 0.00 40.21 1.94
1960 1990 8.721133 AAGACAAATTAGGGGTCTGTAATTTT 57.279 30.769 0.00 0.00 40.80 1.82
1961 1991 8.721133 AAAGACAAATTAGGGGTCTGTAATTT 57.279 30.769 0.00 0.00 40.80 1.82
1962 1992 8.721133 AAAAGACAAATTAGGGGTCTGTAATT 57.279 30.769 0.00 0.00 40.80 1.40
1963 1993 8.721133 AAAAAGACAAATTAGGGGTCTGTAAT 57.279 30.769 0.00 0.00 40.80 1.89
1985 2015 2.936919 TGAGGAGCTCTCAGCAAAAA 57.063 45.000 14.64 0.00 46.71 1.94
1993 2023 1.774110 TGGACATCTGAGGAGCTCTC 58.226 55.000 14.64 9.73 42.74 3.20
1994 2024 2.244486 TTGGACATCTGAGGAGCTCT 57.756 50.000 14.64 0.00 0.00 4.09
1995 2025 3.118482 TCATTTGGACATCTGAGGAGCTC 60.118 47.826 4.71 4.71 0.00 4.09
1996 2026 2.842496 TCATTTGGACATCTGAGGAGCT 59.158 45.455 0.00 0.00 0.00 4.09
1997 2027 3.272574 TCATTTGGACATCTGAGGAGC 57.727 47.619 0.00 0.00 0.00 4.70
1998 2028 7.870509 TTAAATCATTTGGACATCTGAGGAG 57.129 36.000 0.00 0.00 0.00 3.69
1999 2029 8.648698 TTTTAAATCATTTGGACATCTGAGGA 57.351 30.769 0.00 0.00 0.00 3.71
2000 2030 9.880157 AATTTTAAATCATTTGGACATCTGAGG 57.120 29.630 0.00 0.00 0.00 3.86
2002 2032 9.656040 CCAATTTTAAATCATTTGGACATCTGA 57.344 29.630 11.44 0.00 39.33 3.27
2003 2033 9.656040 TCCAATTTTAAATCATTTGGACATCTG 57.344 29.630 13.90 0.00 40.57 2.90
2004 2034 9.880157 CTCCAATTTTAAATCATTTGGACATCT 57.120 29.630 13.90 0.00 40.57 2.90
2005 2035 8.606602 GCTCCAATTTTAAATCATTTGGACATC 58.393 33.333 13.90 6.96 40.57 3.06
2006 2036 7.278424 CGCTCCAATTTTAAATCATTTGGACAT 59.722 33.333 13.90 0.00 40.57 3.06
2007 2037 6.589523 CGCTCCAATTTTAAATCATTTGGACA 59.410 34.615 13.90 2.20 40.57 4.02
2008 2038 6.035975 CCGCTCCAATTTTAAATCATTTGGAC 59.964 38.462 13.90 11.32 40.57 4.02
2009 2039 6.071108 TCCGCTCCAATTTTAAATCATTTGGA 60.071 34.615 15.71 15.71 42.58 3.53
2010 2040 6.035975 GTCCGCTCCAATTTTAAATCATTTGG 59.964 38.462 10.94 10.94 38.52 3.28
2011 2041 6.035975 GGTCCGCTCCAATTTTAAATCATTTG 59.964 38.462 0.00 0.00 0.00 2.32
2012 2042 6.070824 AGGTCCGCTCCAATTTTAAATCATTT 60.071 34.615 0.00 0.00 0.00 2.32
2013 2043 5.422012 AGGTCCGCTCCAATTTTAAATCATT 59.578 36.000 0.00 0.00 0.00 2.57
2014 2044 4.956075 AGGTCCGCTCCAATTTTAAATCAT 59.044 37.500 0.00 0.00 0.00 2.45
2015 2045 4.157656 CAGGTCCGCTCCAATTTTAAATCA 59.842 41.667 0.00 0.00 0.00 2.57
2016 2046 4.398044 TCAGGTCCGCTCCAATTTTAAATC 59.602 41.667 0.00 0.00 0.00 2.17
2017 2047 4.157840 GTCAGGTCCGCTCCAATTTTAAAT 59.842 41.667 0.00 0.00 0.00 1.40
2018 2048 3.504520 GTCAGGTCCGCTCCAATTTTAAA 59.495 43.478 0.00 0.00 0.00 1.52
2019 2049 3.078837 GTCAGGTCCGCTCCAATTTTAA 58.921 45.455 0.00 0.00 0.00 1.52
2020 2050 2.706890 GTCAGGTCCGCTCCAATTTTA 58.293 47.619 0.00 0.00 0.00 1.52
2021 2051 1.534729 GTCAGGTCCGCTCCAATTTT 58.465 50.000 0.00 0.00 0.00 1.82
2022 2052 0.673644 CGTCAGGTCCGCTCCAATTT 60.674 55.000 0.00 0.00 0.00 1.82
2023 2053 1.079127 CGTCAGGTCCGCTCCAATT 60.079 57.895 0.00 0.00 0.00 2.32
2024 2054 2.579201 CGTCAGGTCCGCTCCAAT 59.421 61.111 0.00 0.00 0.00 3.16
2031 2061 1.086696 AATTTGATGCGTCAGGTCCG 58.913 50.000 8.93 0.00 35.39 4.79
2032 2062 1.812571 ACAATTTGATGCGTCAGGTCC 59.187 47.619 8.93 0.00 35.39 4.46
2033 2063 2.744202 AGACAATTTGATGCGTCAGGTC 59.256 45.455 8.93 14.33 35.39 3.85
2034 2064 2.783135 AGACAATTTGATGCGTCAGGT 58.217 42.857 8.93 6.52 35.39 4.00
2035 2065 3.063997 GGTAGACAATTTGATGCGTCAGG 59.936 47.826 8.93 3.39 35.39 3.86
2036 2066 3.684305 TGGTAGACAATTTGATGCGTCAG 59.316 43.478 8.93 0.00 35.39 3.51
2037 2067 3.435327 GTGGTAGACAATTTGATGCGTCA 59.565 43.478 3.97 3.97 0.00 4.35
2038 2068 3.435327 TGTGGTAGACAATTTGATGCGTC 59.565 43.478 2.79 0.00 0.00 5.19
2039 2069 3.188460 GTGTGGTAGACAATTTGATGCGT 59.812 43.478 2.79 0.00 35.91 5.24
2040 2070 3.188254 TGTGTGGTAGACAATTTGATGCG 59.812 43.478 2.79 0.00 35.91 4.73
2041 2071 4.764679 TGTGTGGTAGACAATTTGATGC 57.235 40.909 2.79 0.00 35.91 3.91
2098 2128 2.589442 ACCCGCGCTGACGAAAAA 60.589 55.556 5.56 0.00 43.93 1.94
2099 2129 3.342627 CACCCGCGCTGACGAAAA 61.343 61.111 5.56 0.00 43.93 2.29
2107 2137 4.827087 CTCATCTGCACCCGCGCT 62.827 66.667 5.56 0.00 42.97 5.92
2109 2139 4.827087 AGCTCATCTGCACCCGCG 62.827 66.667 0.00 0.00 42.97 6.46
2110 2140 2.894387 GAGCTCATCTGCACCCGC 60.894 66.667 9.40 0.00 39.24 6.13
2111 2141 2.584418 CGAGCTCATCTGCACCCG 60.584 66.667 15.40 0.00 34.99 5.28
2112 2142 2.202987 CCGAGCTCATCTGCACCC 60.203 66.667 15.40 0.00 34.99 4.61
2113 2143 2.202987 CCCGAGCTCATCTGCACC 60.203 66.667 15.40 0.00 34.99 5.01
2114 2144 1.812922 CACCCGAGCTCATCTGCAC 60.813 63.158 15.40 0.00 34.99 4.57
2115 2145 2.580815 CACCCGAGCTCATCTGCA 59.419 61.111 15.40 0.00 34.99 4.41
2116 2146 2.894387 GCACCCGAGCTCATCTGC 60.894 66.667 15.40 12.21 0.00 4.26
2117 2147 1.521010 CTGCACCCGAGCTCATCTG 60.521 63.158 15.40 5.86 34.99 2.90
2118 2148 1.674764 CTCTGCACCCGAGCTCATCT 61.675 60.000 15.40 0.00 34.99 2.90
2119 2149 1.227205 CTCTGCACCCGAGCTCATC 60.227 63.158 15.40 0.00 34.99 2.92
2120 2150 1.047596 ATCTCTGCACCCGAGCTCAT 61.048 55.000 15.40 0.00 34.99 2.90
2121 2151 1.683707 ATCTCTGCACCCGAGCTCA 60.684 57.895 15.40 0.00 34.99 4.26
2122 2152 1.227205 CATCTCTGCACCCGAGCTC 60.227 63.158 2.73 2.73 34.99 4.09
2123 2153 2.729479 CCATCTCTGCACCCGAGCT 61.729 63.158 0.00 0.00 34.99 4.09
2124 2154 2.037620 ATCCATCTCTGCACCCGAGC 62.038 60.000 0.00 0.00 0.00 5.03
2125 2155 0.467384 AATCCATCTCTGCACCCGAG 59.533 55.000 0.00 0.00 0.00 4.63
2126 2156 0.911769 AAATCCATCTCTGCACCCGA 59.088 50.000 0.00 0.00 0.00 5.14
2127 2157 1.755179 AAAATCCATCTCTGCACCCG 58.245 50.000 0.00 0.00 0.00 5.28
2128 2158 2.417787 GCAAAAATCCATCTCTGCACCC 60.418 50.000 0.00 0.00 0.00 4.61
2129 2159 2.231964 TGCAAAAATCCATCTCTGCACC 59.768 45.455 0.00 0.00 35.02 5.01
2130 2160 3.581024 TGCAAAAATCCATCTCTGCAC 57.419 42.857 0.00 0.00 35.02 4.57
2131 2161 2.095110 CGTGCAAAAATCCATCTCTGCA 60.095 45.455 0.00 0.00 37.46 4.41
2132 2162 2.162208 TCGTGCAAAAATCCATCTCTGC 59.838 45.455 0.00 0.00 0.00 4.26
2133 2163 4.424061 TTCGTGCAAAAATCCATCTCTG 57.576 40.909 0.00 0.00 0.00 3.35
2134 2164 6.949352 ATATTCGTGCAAAAATCCATCTCT 57.051 33.333 0.00 0.00 0.00 3.10
2135 2165 7.166473 GTGAATATTCGTGCAAAAATCCATCTC 59.834 37.037 10.80 0.00 0.00 2.75
2136 2166 6.974622 GTGAATATTCGTGCAAAAATCCATCT 59.025 34.615 10.80 0.00 0.00 2.90
2137 2167 6.751425 TGTGAATATTCGTGCAAAAATCCATC 59.249 34.615 10.80 0.00 0.00 3.51
2138 2168 6.629128 TGTGAATATTCGTGCAAAAATCCAT 58.371 32.000 10.80 0.00 0.00 3.41
2139 2169 6.018589 TGTGAATATTCGTGCAAAAATCCA 57.981 33.333 10.80 0.00 0.00 3.41
2140 2170 6.942886 TTGTGAATATTCGTGCAAAAATCC 57.057 33.333 10.80 0.00 0.00 3.01
2141 2171 8.646356 TGATTTGTGAATATTCGTGCAAAAATC 58.354 29.630 23.63 20.12 33.33 2.17
2142 2172 8.531622 TGATTTGTGAATATTCGTGCAAAAAT 57.468 26.923 23.63 15.00 33.33 1.82
2143 2173 7.936950 TGATTTGTGAATATTCGTGCAAAAA 57.063 28.000 23.63 16.96 33.33 1.94
2144 2174 9.288124 CTATGATTTGTGAATATTCGTGCAAAA 57.712 29.630 23.63 15.28 33.33 2.44
2145 2175 8.672815 TCTATGATTTGTGAATATTCGTGCAAA 58.327 29.630 22.80 22.80 33.75 3.68
2146 2176 8.207521 TCTATGATTTGTGAATATTCGTGCAA 57.792 30.769 10.80 11.94 0.00 4.08
2147 2177 7.784633 TCTATGATTTGTGAATATTCGTGCA 57.215 32.000 10.80 6.96 0.00 4.57
2174 2204 9.448587 AGTGTTACCCTAGTGGAGAATAATATT 57.551 33.333 4.45 0.00 38.00 1.28
2180 2210 4.684724 TCAGTGTTACCCTAGTGGAGAAT 58.315 43.478 4.45 0.00 38.00 2.40
2236 2266 3.317711 TGTTGGCGAGACATTGTTCAAAT 59.682 39.130 0.00 0.00 0.00 2.32
2332 2362 7.707893 GCGTTGTATAGACATAAAAGTCCCTTA 59.292 37.037 0.00 0.00 39.34 2.69
2379 2409 0.321564 TTGTTCCAGTGATGGCTCGG 60.322 55.000 0.00 0.00 0.00 4.63
2396 2426 5.397326 GTGCCTTGAAAAAGAGATAGCTTG 58.603 41.667 0.00 0.00 0.00 4.01
2411 2441 3.765381 TCAATTGAAGATGGTGCCTTGA 58.235 40.909 5.45 0.00 0.00 3.02
2419 2449 4.337555 GTGTCCCTCATCAATTGAAGATGG 59.662 45.833 21.97 21.97 42.38 3.51
2426 2456 4.212143 TGAGAGTGTCCCTCATCAATTG 57.788 45.455 0.00 0.00 43.12 2.32
2460 2490 0.380378 GGCACGTTTGACTTGCTCAA 59.620 50.000 9.01 0.00 42.25 3.02
2494 2524 4.081642 TCCATCCTCTTAAACGTCCTTGAG 60.082 45.833 0.00 0.00 0.00 3.02
2606 2636 3.327757 AGTTCCTTCAAGTGGACATGCTA 59.672 43.478 0.00 0.00 32.65 3.49
2629 2659 9.953697 ACGAAGACATACTTAGTGAGATATTTC 57.046 33.333 0.00 0.00 41.49 2.17
2825 2873 2.802816 GAGCATAGTTTAGCCCGACATG 59.197 50.000 0.00 0.00 0.00 3.21
2965 3013 2.363306 TGGTGGCATGGGAATCATAC 57.637 50.000 0.00 0.00 34.12 2.39
3186 3262 1.804151 GCCACTTCACGCTTATGTTCA 59.196 47.619 0.00 0.00 0.00 3.18
3190 3266 1.382522 ATGGCCACTTCACGCTTATG 58.617 50.000 8.16 0.00 0.00 1.90
3405 3482 4.858850 TGGACATGGCAGATAAACTCATT 58.141 39.130 0.00 0.00 0.00 2.57
3523 3600 3.369892 GCTATCTTCCCGCATGATATGGT 60.370 47.826 0.00 0.00 0.00 3.55
3615 3692 3.061848 CCCGGTGGTGGTTGATGC 61.062 66.667 0.00 0.00 0.00 3.91
3661 3743 6.260700 TCCCGCCCTGCATATTTATATTAT 57.739 37.500 0.00 0.00 0.00 1.28
3701 3783 7.180408 ACCATGTAACACTCTATAGAGGTTGTT 59.820 37.037 28.11 28.11 46.13 2.83
3702 3784 6.668283 ACCATGTAACACTCTATAGAGGTTGT 59.332 38.462 29.03 22.47 46.13 3.32
3788 3870 6.878389 AGAGAGCTTGATTTAGAGTTTTCCAG 59.122 38.462 0.00 0.00 0.00 3.86
3837 3919 4.706842 AGTTAATAATCCTCCGCACCAT 57.293 40.909 0.00 0.00 0.00 3.55
3911 3993 7.008332 TCTCAACGGTATCCTTAAGATGGATA 58.992 38.462 3.36 0.82 43.41 2.59
4162 4322 4.679654 CGGCAAATGGAGTTCTTTTTGTAC 59.320 41.667 0.00 0.00 0.00 2.90
4180 4340 1.904287 AAAGTACTCCATTGCGGCAA 58.096 45.000 18.85 18.85 33.14 4.52
4182 4342 2.488153 AGAAAAAGTACTCCATTGCGGC 59.512 45.455 0.00 0.00 33.14 6.53
4206 4366 2.171870 TCTTTAAGGACTTATGCCCCGG 59.828 50.000 0.00 0.00 0.00 5.73
4223 4383 8.579850 TGGCACACTTAAAATCTATGATCTTT 57.420 30.769 0.00 0.00 0.00 2.52
4275 4435 6.049149 CGAGCAAGATAAAAGGGTATTCTCA 58.951 40.000 0.00 0.00 0.00 3.27
4305 4465 6.689554 TGTCATGTAATGTGATGCAAACAAT 58.310 32.000 9.38 4.49 46.80 2.71
4321 4481 5.872617 CGTTCCCTAACAGAAATGTCATGTA 59.127 40.000 0.00 0.00 35.16 2.29
4329 4489 9.159364 GAAATTACTACGTTCCCTAACAGAAAT 57.841 33.333 0.00 0.00 35.16 2.17
4330 4490 8.149647 TGAAATTACTACGTTCCCTAACAGAAA 58.850 33.333 0.00 0.00 35.16 2.52
4331 4491 7.669427 TGAAATTACTACGTTCCCTAACAGAA 58.331 34.615 0.00 0.00 35.16 3.02
4332 4492 7.230849 TGAAATTACTACGTTCCCTAACAGA 57.769 36.000 0.00 0.00 35.16 3.41
4389 4549 2.549563 CCCTCTCGTTGCTATGCATCAT 60.550 50.000 0.19 0.00 38.76 2.45
4568 4728 1.672854 TAACACTCGGCTGGATCGGG 61.673 60.000 0.00 0.00 0.00 5.14
4587 4747 1.048601 TGCTGACGAAACTCTCCCTT 58.951 50.000 0.00 0.00 0.00 3.95
4610 4770 1.447663 CATCACCGTCATCACGCCA 60.448 57.895 0.00 0.00 45.29 5.69
4647 4807 1.601419 TAGCGGTGCTTAGGCGAAGT 61.601 55.000 9.14 0.00 40.44 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.