Multiple sequence alignment - TraesCS2A01G136600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G136600 chr2A 100.000 3614 0 0 1 3614 82345526 82341913 0.000000e+00 6674.0
1 TraesCS2A01G136600 chr2A 84.186 215 33 1 2781 2995 19379779 19379566 1.320000e-49 207.0
2 TraesCS2A01G136600 chr2B 88.915 2111 124 42 631 2666 134044229 134042154 0.000000e+00 2501.0
3 TraesCS2A01G136600 chr2B 97.441 547 12 2 2 548 134044772 134044228 0.000000e+00 931.0
4 TraesCS2A01G136600 chr2B 82.227 467 61 11 2995 3442 134042121 134041658 2.040000e-102 383.0
5 TraesCS2A01G136600 chr2B 97.778 90 2 0 543 632 798832828 798832917 4.830000e-34 156.0
6 TraesCS2A01G136600 chr2D 91.351 1584 89 18 1112 2656 82180213 82178639 0.000000e+00 2122.0
7 TraesCS2A01G136600 chr2D 91.952 497 33 6 2 495 82181219 82180727 0.000000e+00 689.0
8 TraesCS2A01G136600 chr2D 92.841 447 17 10 631 1076 82180646 82180214 5.090000e-178 634.0
9 TraesCS2A01G136600 chr2D 87.681 138 16 1 3472 3609 638304931 638305067 3.730000e-35 159.0
10 TraesCS2A01G136600 chr2D 84.444 135 21 0 3475 3609 604075056 604074922 2.260000e-27 134.0
11 TraesCS2A01G136600 chr1D 84.649 228 32 3 2769 2995 304132225 304132450 1.310000e-54 224.0
12 TraesCS2A01G136600 chr1D 84.615 208 29 3 2778 2983 276797347 276797553 1.700000e-48 204.0
13 TraesCS2A01G136600 chr1D 96.809 94 3 0 539 632 474055684 474055591 1.340000e-34 158.0
14 TraesCS2A01G136600 chr7A 83.843 229 35 2 2769 2995 627163835 627164063 2.190000e-52 217.0
15 TraesCS2A01G136600 chr7A 96.842 95 1 2 546 639 705448837 705448744 1.340000e-34 158.0
16 TraesCS2A01G136600 chr7A 87.597 129 14 2 3482 3609 146868790 146868917 8.080000e-32 148.0
17 TraesCS2A01G136600 chr7A 85.507 138 18 2 3476 3612 37108039 37107903 3.760000e-30 143.0
18 TraesCS2A01G136600 chr7A 84.328 134 21 0 3475 3608 222649033 222649166 8.140000e-27 132.0
19 TraesCS2A01G136600 chr3A 83.945 218 35 0 2778 2995 419388447 419388664 3.660000e-50 209.0
20 TraesCS2A01G136600 chr5A 85.629 167 21 2 2832 2995 652996573 652996739 4.800000e-39 172.0
21 TraesCS2A01G136600 chr5A 95.918 98 3 1 545 641 113799751 113799654 1.340000e-34 158.0
22 TraesCS2A01G136600 chr6B 80.841 214 36 3 2790 3003 345466250 345466042 2.890000e-36 163.0
23 TraesCS2A01G136600 chr3B 95.000 100 5 0 543 642 793269205 793269106 1.340000e-34 158.0
24 TraesCS2A01G136600 chr4B 97.778 90 2 0 547 636 599830305 599830394 4.830000e-34 156.0
25 TraesCS2A01G136600 chr4B 81.609 174 26 5 2825 2994 637365128 637364957 4.870000e-29 139.0
26 TraesCS2A01G136600 chr5D 86.861 137 18 0 3475 3611 6910424 6910560 1.740000e-33 154.0
27 TraesCS2A01G136600 chr7B 94.898 98 4 1 538 635 465970490 465970586 6.250000e-33 152.0
28 TraesCS2A01G136600 chr5B 94.059 101 5 1 543 642 676928194 676928094 6.250000e-33 152.0
29 TraesCS2A01G136600 chr5B 85.294 136 20 0 3474 3609 54507673 54507808 1.350000e-29 141.0
30 TraesCS2A01G136600 chr4A 94.000 100 6 0 543 642 615525416 615525515 6.250000e-33 152.0
31 TraesCS2A01G136600 chr4D 85.821 134 19 0 3476 3609 455753124 455753257 3.760000e-30 143.0
32 TraesCS2A01G136600 chr6D 81.657 169 30 1 2813 2980 332802156 332801988 4.870000e-29 139.0
33 TraesCS2A01G136600 chr6D 100.000 28 0 0 3443 3470 271299904 271299877 7.000000e-03 52.8
34 TraesCS2A01G136600 chr6A 85.075 134 18 2 3478 3610 115267748 115267616 6.290000e-28 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G136600 chr2A 82341913 82345526 3613 True 6674.000000 6674 100.000000 1 3614 1 chr2A.!!$R2 3613
1 TraesCS2A01G136600 chr2B 134041658 134044772 3114 True 1271.666667 2501 89.527667 2 3442 3 chr2B.!!$R1 3440
2 TraesCS2A01G136600 chr2D 82178639 82181219 2580 True 1148.333333 2122 92.048000 2 2656 3 chr2D.!!$R2 2654

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
72 73 0.039527 GCCGTTGCTTCGAATGGTTT 60.040 50.0 0.00 0.00 34.83 3.27 F
563 597 0.258194 ACTACTCCCTCCGTTCGGAT 59.742 55.0 14.34 2.21 33.34 4.18 F
1227 1278 0.174389 TGATGTGAGGAGCGCTTCTC 59.826 55.0 34.62 34.62 41.15 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1220 1271 0.171679 TGCATTGCATTGGAGAAGCG 59.828 50.0 7.38 0.0 31.71 4.68 R
2012 2107 0.321919 AGCCGTTGACACTGCATCAT 60.322 50.0 0.00 0.0 35.65 2.45 R
2993 3114 0.382158 CGTCTGCTGGCTCTCGATTA 59.618 55.0 0.00 0.0 0.00 1.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.941210 TGGCAGGGATGTTTTCGTC 58.059 52.632 0.00 0.00 35.27 4.20
72 73 0.039527 GCCGTTGCTTCGAATGGTTT 60.040 50.000 0.00 0.00 34.83 3.27
490 495 4.685165 TGTGTCAATTGTGTTTGCATATGC 59.315 37.500 21.09 21.09 42.50 3.14
548 582 3.126000 AGTGCGTCTCTTTACGGTACTAC 59.874 47.826 0.00 0.00 43.06 2.73
549 583 3.126000 GTGCGTCTCTTTACGGTACTACT 59.874 47.826 0.00 0.00 43.06 2.57
550 584 3.372206 TGCGTCTCTTTACGGTACTACTC 59.628 47.826 0.00 0.00 43.06 2.59
551 585 3.242576 GCGTCTCTTTACGGTACTACTCC 60.243 52.174 0.00 0.00 43.06 3.85
552 586 3.311048 CGTCTCTTTACGGTACTACTCCC 59.689 52.174 0.00 0.00 39.19 4.30
553 587 4.522114 GTCTCTTTACGGTACTACTCCCT 58.478 47.826 0.00 0.00 0.00 4.20
554 588 4.574421 GTCTCTTTACGGTACTACTCCCTC 59.426 50.000 0.00 0.00 0.00 4.30
555 589 3.882288 CTCTTTACGGTACTACTCCCTCC 59.118 52.174 0.00 0.00 0.00 4.30
556 590 2.332063 TTACGGTACTACTCCCTCCG 57.668 55.000 0.00 0.00 45.53 4.63
557 591 4.972875 CGGTACTACTCCCTCCGT 57.027 61.111 0.00 0.00 36.99 4.69
558 592 3.181526 CGGTACTACTCCCTCCGTT 57.818 57.895 0.00 0.00 36.99 4.44
559 593 1.020437 CGGTACTACTCCCTCCGTTC 58.980 60.000 0.00 0.00 36.99 3.95
560 594 1.020437 GGTACTACTCCCTCCGTTCG 58.980 60.000 0.00 0.00 0.00 3.95
561 595 1.020437 GTACTACTCCCTCCGTTCGG 58.980 60.000 4.74 4.74 0.00 4.30
562 596 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
563 597 0.258194 ACTACTCCCTCCGTTCGGAT 59.742 55.000 14.34 2.21 33.34 4.18
564 598 1.341778 ACTACTCCCTCCGTTCGGATT 60.342 52.381 14.34 0.62 33.34 3.01
565 599 1.755380 CTACTCCCTCCGTTCGGATTT 59.245 52.381 14.34 0.93 33.34 2.17
566 600 1.856629 ACTCCCTCCGTTCGGATTTA 58.143 50.000 14.34 2.52 33.34 1.40
567 601 1.479730 ACTCCCTCCGTTCGGATTTAC 59.520 52.381 14.34 0.00 33.34 2.01
568 602 1.755380 CTCCCTCCGTTCGGATTTACT 59.245 52.381 14.34 0.00 33.34 2.24
569 603 2.167900 CTCCCTCCGTTCGGATTTACTT 59.832 50.000 14.34 0.00 33.34 2.24
570 604 2.093869 TCCCTCCGTTCGGATTTACTTG 60.094 50.000 14.34 1.37 33.34 3.16
571 605 2.354403 CCCTCCGTTCGGATTTACTTGT 60.354 50.000 14.34 0.00 33.34 3.16
572 606 2.928116 CCTCCGTTCGGATTTACTTGTC 59.072 50.000 14.34 0.00 33.34 3.18
573 607 2.597305 CTCCGTTCGGATTTACTTGTCG 59.403 50.000 14.34 0.00 33.34 4.35
574 608 2.030007 TCCGTTCGGATTTACTTGTCGT 60.030 45.455 10.00 0.00 0.00 4.34
575 609 2.091588 CCGTTCGGATTTACTTGTCGTG 59.908 50.000 5.19 0.00 0.00 4.35
576 610 2.091588 CGTTCGGATTTACTTGTCGTGG 59.908 50.000 0.00 0.00 0.00 4.94
577 611 3.062042 GTTCGGATTTACTTGTCGTGGT 58.938 45.455 0.00 0.00 0.00 4.16
578 612 3.389925 TCGGATTTACTTGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
579 613 3.731089 TCGGATTTACTTGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
580 614 4.128643 TCGGATTTACTTGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
581 615 5.295950 TCGGATTTACTTGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
582 616 5.406175 TCGGATTTACTTGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
583 617 5.178067 CGGATTTACTTGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
584 618 6.293027 CGGATTTACTTGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
585 619 7.073883 GGATTTACTTGTCGTGGTTTTAGTTC 58.926 38.462 0.00 0.00 0.00 3.01
586 620 6.981762 TTTACTTGTCGTGGTTTTAGTTCA 57.018 33.333 0.00 0.00 0.00 3.18
587 621 6.981762 TTACTTGTCGTGGTTTTAGTTCAA 57.018 33.333 0.00 0.00 0.00 2.69
588 622 5.883503 ACTTGTCGTGGTTTTAGTTCAAA 57.116 34.783 0.00 0.00 0.00 2.69
589 623 6.445357 ACTTGTCGTGGTTTTAGTTCAAAT 57.555 33.333 0.00 0.00 0.00 2.32
590 624 6.859017 ACTTGTCGTGGTTTTAGTTCAAATT 58.141 32.000 0.00 0.00 0.00 1.82
591 625 7.317390 ACTTGTCGTGGTTTTAGTTCAAATTT 58.683 30.769 0.00 0.00 0.00 1.82
592 626 7.274686 ACTTGTCGTGGTTTTAGTTCAAATTTG 59.725 33.333 12.15 12.15 0.00 2.32
593 627 6.853720 TGTCGTGGTTTTAGTTCAAATTTGA 58.146 32.000 16.91 16.91 34.92 2.69
594 628 7.313646 TGTCGTGGTTTTAGTTCAAATTTGAA 58.686 30.769 26.01 26.01 44.31 2.69
607 641 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
608 642 6.853720 TCAAATTTGAACTAAAACCACGACA 58.146 32.000 18.45 0.00 33.55 4.35
609 643 7.313646 TCAAATTTGAACTAAAACCACGACAA 58.686 30.769 18.45 0.00 33.55 3.18
610 644 7.486551 TCAAATTTGAACTAAAACCACGACAAG 59.513 33.333 18.45 0.00 33.55 3.16
611 645 5.883503 TTTGAACTAAAACCACGACAAGT 57.116 34.783 0.00 0.00 0.00 3.16
612 646 6.981762 TTTGAACTAAAACCACGACAAGTA 57.018 33.333 0.00 0.00 0.00 2.24
613 647 6.981762 TTGAACTAAAACCACGACAAGTAA 57.018 33.333 0.00 0.00 0.00 2.24
614 648 6.981762 TGAACTAAAACCACGACAAGTAAA 57.018 33.333 0.00 0.00 0.00 2.01
615 649 7.556733 TGAACTAAAACCACGACAAGTAAAT 57.443 32.000 0.00 0.00 0.00 1.40
616 650 7.632721 TGAACTAAAACCACGACAAGTAAATC 58.367 34.615 0.00 0.00 0.00 2.17
617 651 6.219302 ACTAAAACCACGACAAGTAAATCG 57.781 37.500 0.00 0.00 43.97 3.34
618 652 4.477302 AAAACCACGACAAGTAAATCGG 57.523 40.909 0.00 0.00 42.67 4.18
619 653 3.389925 AACCACGACAAGTAAATCGGA 57.610 42.857 0.00 0.00 42.67 4.55
620 654 3.389925 ACCACGACAAGTAAATCGGAA 57.610 42.857 0.00 0.00 42.67 4.30
621 655 3.062042 ACCACGACAAGTAAATCGGAAC 58.938 45.455 0.00 0.00 42.67 3.62
719 753 3.874383 TGAAGGACATTTCCAGGACAA 57.126 42.857 0.00 0.00 45.72 3.18
720 754 4.177537 TGAAGGACATTTCCAGGACAAA 57.822 40.909 0.00 0.00 45.72 2.83
721 755 4.739793 TGAAGGACATTTCCAGGACAAAT 58.260 39.130 0.00 0.00 45.72 2.32
760 794 4.439305 TGGGAAGAGAAATGCAAATTCG 57.561 40.909 9.23 0.00 32.04 3.34
800 834 1.550976 GGGTTGACCTCTGTAGTGGAG 59.449 57.143 6.97 0.00 35.85 3.86
836 870 1.404035 AGCCGAAAACAGTTTGTGACC 59.596 47.619 0.00 0.00 0.00 4.02
840 874 2.422127 CGAAAACAGTTTGTGACCTGGT 59.578 45.455 0.00 0.00 0.00 4.00
841 875 3.119637 CGAAAACAGTTTGTGACCTGGTT 60.120 43.478 0.00 0.00 0.00 3.67
842 876 4.095185 CGAAAACAGTTTGTGACCTGGTTA 59.905 41.667 0.00 0.00 0.00 2.85
843 877 5.576447 AAAACAGTTTGTGACCTGGTTAG 57.424 39.130 0.00 0.00 0.00 2.34
875 910 6.868864 CAGCAGAAAAACTAGTAGAACAGCTA 59.131 38.462 3.59 0.00 0.00 3.32
956 991 1.265635 CCAAGAATCGTCCGTTGCAAA 59.734 47.619 0.00 0.00 0.00 3.68
958 993 2.681152 AGAATCGTCCGTTGCAAAAC 57.319 45.000 0.00 0.00 0.00 2.43
961 996 0.309612 ATCGTCCGTTGCAAAACACC 59.690 50.000 0.00 0.00 0.00 4.16
962 997 1.652930 CGTCCGTTGCAAAACACCG 60.653 57.895 0.00 0.00 33.31 4.94
963 998 1.942223 GTCCGTTGCAAAACACCGC 60.942 57.895 0.00 0.00 31.94 5.68
964 999 2.103143 CCGTTGCAAAACACCGCA 59.897 55.556 0.00 0.00 31.94 5.69
965 1000 1.943693 CCGTTGCAAAACACCGCAG 60.944 57.895 0.00 0.00 39.75 5.18
995 1030 4.929781 AGAACAGAAGAAAGCAAGCAAAG 58.070 39.130 0.00 0.00 0.00 2.77
1172 1216 3.626930 AGAGTAAGTACCTGCTCCTGAG 58.373 50.000 6.01 0.00 0.00 3.35
1187 1231 1.067821 CCTGAGTTATCTCCAGCGTCC 59.932 57.143 0.00 0.00 39.75 4.79
1193 1237 3.515901 AGTTATCTCCAGCGTCCTCTTTT 59.484 43.478 0.00 0.00 0.00 2.27
1194 1238 2.393271 ATCTCCAGCGTCCTCTTTTG 57.607 50.000 0.00 0.00 0.00 2.44
1196 1240 0.321122 CTCCAGCGTCCTCTTTTGCT 60.321 55.000 0.00 0.00 38.43 3.91
1198 1242 1.208614 CAGCGTCCTCTTTTGCTGC 59.791 57.895 0.00 0.00 46.97 5.25
1206 1257 3.079578 TCCTCTTTTGCTGCTTCTGATG 58.920 45.455 0.00 0.00 0.00 3.07
1214 1265 1.064208 GCTGCTTCTGATGCTGATGTG 59.936 52.381 21.14 6.01 0.00 3.21
1220 1271 1.138464 TCTGATGCTGATGTGAGGAGC 59.862 52.381 0.00 0.00 0.00 4.70
1227 1278 0.174389 TGATGTGAGGAGCGCTTCTC 59.826 55.000 34.62 34.62 41.15 2.87
1311 1362 6.463614 GGAAGCATGACTATGACTGGTAAGAT 60.464 42.308 0.00 0.00 36.36 2.40
1331 1382 4.813161 AGATAAAACGCTCTCATGATGGTG 59.187 41.667 0.00 1.42 0.00 4.17
1332 1383 1.742761 AAACGCTCTCATGATGGTGG 58.257 50.000 0.00 0.00 0.00 4.61
1354 1406 1.453762 GGCATTCAGATCAGCTGCCC 61.454 60.000 9.47 2.69 45.26 5.36
1380 1432 3.444916 CGAAACATCGTGCTACCAGTAT 58.555 45.455 0.00 0.00 0.00 2.12
1403 1455 3.837213 ATTTCTCTGACATTGTTGCGG 57.163 42.857 0.00 0.00 0.00 5.69
1404 1456 0.874390 TTCTCTGACATTGTTGCGGC 59.126 50.000 0.00 0.00 0.00 6.53
1424 1476 2.186076 CTCATCGTTGTTCGTAGGCTC 58.814 52.381 0.00 0.00 40.80 4.70
1460 1512 2.043450 CCTCTCTCGTGCTCCCCT 60.043 66.667 0.00 0.00 0.00 4.79
1549 1601 3.411351 CCGTCCGCGTTTCCAGTG 61.411 66.667 4.92 0.00 36.15 3.66
1580 1632 6.754702 ACGTAGTGATCAGACTAAAGCTTA 57.245 37.500 0.00 0.00 42.51 3.09
1602 1664 0.454600 GGTCATTCATGGTGCAGCTG 59.545 55.000 18.08 10.11 0.00 4.24
1710 1772 2.504244 CTGTCGTCGGCGTCTTCC 60.504 66.667 10.18 0.00 39.49 3.46
1713 1775 3.796443 TCGTCGGCGTCTTCCTCG 61.796 66.667 10.18 2.37 39.49 4.63
1935 2030 1.347707 CCCAAGTCAACTACCAGAGCA 59.652 52.381 0.00 0.00 0.00 4.26
2020 2115 1.300481 CCAGCTGAGTCATGATGCAG 58.700 55.000 17.39 18.31 0.00 4.41
2184 2291 4.382345 AGCCAGCAAAAGATTATCAAGC 57.618 40.909 0.00 0.00 0.00 4.01
2228 2338 4.717629 CGACGAGAAGGCCGCACA 62.718 66.667 0.00 0.00 0.00 4.57
2313 2423 0.734253 CTCGGAAGCTCACGGTGAAG 60.734 60.000 12.54 7.62 0.00 3.02
2649 2769 1.680338 GGGATACTGAAATTGGCGCT 58.320 50.000 7.64 0.00 0.00 5.92
2650 2770 1.334869 GGGATACTGAAATTGGCGCTG 59.665 52.381 7.64 0.00 0.00 5.18
2666 2787 2.420022 GCGCTGACTTGTTGGTAATCAT 59.580 45.455 0.00 0.00 0.00 2.45
2667 2788 3.728864 GCGCTGACTTGTTGGTAATCATG 60.729 47.826 0.00 0.00 0.00 3.07
2669 2790 4.083324 CGCTGACTTGTTGGTAATCATGTT 60.083 41.667 0.00 0.00 0.00 2.71
2670 2791 5.393962 GCTGACTTGTTGGTAATCATGTTC 58.606 41.667 0.00 0.00 0.00 3.18
2671 2792 5.619981 GCTGACTTGTTGGTAATCATGTTCC 60.620 44.000 0.00 0.00 0.00 3.62
2673 2794 4.998051 ACTTGTTGGTAATCATGTTCCCT 58.002 39.130 0.00 0.00 0.00 4.20
2674 2795 5.010282 ACTTGTTGGTAATCATGTTCCCTC 58.990 41.667 0.00 0.00 0.00 4.30
2675 2796 3.963129 TGTTGGTAATCATGTTCCCTCC 58.037 45.455 0.00 0.00 0.00 4.30
2678 2799 2.574369 TGGTAATCATGTTCCCTCCGTT 59.426 45.455 0.00 0.00 0.00 4.44
2680 2801 2.420058 AATCATGTTCCCTCCGTTCC 57.580 50.000 0.00 0.00 0.00 3.62
2681 2802 1.285280 ATCATGTTCCCTCCGTTCCA 58.715 50.000 0.00 0.00 0.00 3.53
2682 2803 1.285280 TCATGTTCCCTCCGTTCCAT 58.715 50.000 0.00 0.00 0.00 3.41
2684 2805 3.045634 TCATGTTCCCTCCGTTCCATAT 58.954 45.455 0.00 0.00 0.00 1.78
2686 2807 4.656575 TCATGTTCCCTCCGTTCCATATTA 59.343 41.667 0.00 0.00 0.00 0.98
2687 2808 5.131308 TCATGTTCCCTCCGTTCCATATTAA 59.869 40.000 0.00 0.00 0.00 1.40
2688 2809 5.640158 TGTTCCCTCCGTTCCATATTAAT 57.360 39.130 0.00 0.00 0.00 1.40
2689 2810 5.617252 TGTTCCCTCCGTTCCATATTAATC 58.383 41.667 0.00 0.00 0.00 1.75
2692 2813 3.994392 CCCTCCGTTCCATATTAATCGTG 59.006 47.826 0.00 0.00 0.00 4.35
2694 2815 4.307432 CTCCGTTCCATATTAATCGTGCT 58.693 43.478 0.00 0.00 0.00 4.40
2695 2816 4.304110 TCCGTTCCATATTAATCGTGCTC 58.696 43.478 0.00 0.00 0.00 4.26
2696 2817 4.055360 CCGTTCCATATTAATCGTGCTCA 58.945 43.478 0.00 0.00 0.00 4.26
2698 2819 5.007234 CCGTTCCATATTAATCGTGCTCAAA 59.993 40.000 0.00 0.00 0.00 2.69
2699 2820 5.901884 CGTTCCATATTAATCGTGCTCAAAC 59.098 40.000 0.00 0.00 0.00 2.93
2700 2821 5.651172 TCCATATTAATCGTGCTCAAACG 57.349 39.130 0.00 0.00 44.92 3.60
2701 2822 4.509970 TCCATATTAATCGTGCTCAAACGG 59.490 41.667 0.00 0.00 43.73 4.44
2702 2823 4.272504 CCATATTAATCGTGCTCAAACGGT 59.727 41.667 0.00 0.00 43.73 4.83
2703 2824 3.740044 ATTAATCGTGCTCAAACGGTG 57.260 42.857 0.00 0.00 43.73 4.94
2704 2825 2.157834 TAATCGTGCTCAAACGGTGT 57.842 45.000 0.00 0.00 43.73 4.16
2705 2826 2.157834 AATCGTGCTCAAACGGTGTA 57.842 45.000 0.00 0.00 43.73 2.90
2706 2827 2.380084 ATCGTGCTCAAACGGTGTAT 57.620 45.000 0.00 0.00 43.73 2.29
2707 2828 1.705256 TCGTGCTCAAACGGTGTATC 58.295 50.000 0.00 0.00 43.73 2.24
2708 2829 1.271379 TCGTGCTCAAACGGTGTATCT 59.729 47.619 0.00 0.00 43.73 1.98
2709 2830 2.488937 TCGTGCTCAAACGGTGTATCTA 59.511 45.455 0.00 0.00 43.73 1.98
2710 2831 2.852413 CGTGCTCAAACGGTGTATCTAG 59.148 50.000 0.00 0.00 39.89 2.43
2711 2832 2.603560 GTGCTCAAACGGTGTATCTAGC 59.396 50.000 0.00 0.00 0.00 3.42
2712 2833 2.232696 TGCTCAAACGGTGTATCTAGCA 59.767 45.455 0.00 0.00 36.45 3.49
2713 2834 3.118775 TGCTCAAACGGTGTATCTAGCAT 60.119 43.478 0.00 0.00 34.05 3.79
2714 2835 3.871594 GCTCAAACGGTGTATCTAGCATT 59.128 43.478 0.00 0.00 0.00 3.56
2715 2836 4.260375 GCTCAAACGGTGTATCTAGCATTG 60.260 45.833 0.00 0.00 0.00 2.82
2716 2837 5.079689 TCAAACGGTGTATCTAGCATTGA 57.920 39.130 0.00 0.00 0.00 2.57
2717 2838 5.483811 TCAAACGGTGTATCTAGCATTGAA 58.516 37.500 0.00 0.00 0.00 2.69
2718 2839 5.935206 TCAAACGGTGTATCTAGCATTGAAA 59.065 36.000 0.00 0.00 0.00 2.69
2719 2840 6.597672 TCAAACGGTGTATCTAGCATTGAAAT 59.402 34.615 0.00 0.00 0.00 2.17
2720 2841 7.766738 TCAAACGGTGTATCTAGCATTGAAATA 59.233 33.333 0.00 0.00 0.00 1.40
2721 2842 7.478520 AACGGTGTATCTAGCATTGAAATAC 57.521 36.000 0.00 0.00 0.00 1.89
2722 2843 6.578944 ACGGTGTATCTAGCATTGAAATACA 58.421 36.000 0.00 0.00 32.07 2.29
2723 2844 7.217200 ACGGTGTATCTAGCATTGAAATACAT 58.783 34.615 2.59 0.00 35.81 2.29
2724 2845 7.171508 ACGGTGTATCTAGCATTGAAATACATG 59.828 37.037 0.00 0.00 35.81 3.21
2725 2846 7.171508 CGGTGTATCTAGCATTGAAATACATGT 59.828 37.037 2.69 2.69 35.81 3.21
2726 2847 9.489084 GGTGTATCTAGCATTGAAATACATGTA 57.511 33.333 8.27 8.27 35.81 2.29
2735 2856 9.224267 AGCATTGAAATACATGTAGATACATCC 57.776 33.333 11.91 0.00 44.57 3.51
2736 2857 9.002600 GCATTGAAATACATGTAGATACATCCA 57.997 33.333 11.91 0.00 44.57 3.41
2766 2887 9.935241 CATATACAAGTAATATGAAGCAGGAGT 57.065 33.333 0.00 0.00 31.74 3.85
2769 2890 6.583562 ACAAGTAATATGAAGCAGGAGTACC 58.416 40.000 0.00 0.00 0.00 3.34
2771 2892 7.092846 ACAAGTAATATGAAGCAGGAGTACCTT 60.093 37.037 0.00 0.00 45.36 3.50
2772 2893 7.056844 AGTAATATGAAGCAGGAGTACCTTC 57.943 40.000 2.82 2.82 45.36 3.46
2773 2894 5.957771 AATATGAAGCAGGAGTACCTTCA 57.042 39.130 12.12 12.12 45.36 3.02
2777 2898 5.086104 TGAAGCAGGAGTACCTTCATTAC 57.914 43.478 7.24 0.00 45.36 1.89
2778 2899 4.777896 TGAAGCAGGAGTACCTTCATTACT 59.222 41.667 7.24 0.00 45.36 2.24
2779 2900 5.248477 TGAAGCAGGAGTACCTTCATTACTT 59.752 40.000 7.24 0.00 45.36 2.24
2780 2901 5.763876 AGCAGGAGTACCTTCATTACTTT 57.236 39.130 0.00 0.00 45.36 2.66
2781 2902 6.128138 AGCAGGAGTACCTTCATTACTTTT 57.872 37.500 0.00 0.00 45.36 2.27
2782 2903 6.543735 AGCAGGAGTACCTTCATTACTTTTT 58.456 36.000 0.00 0.00 45.36 1.94
2783 2904 7.686434 AGCAGGAGTACCTTCATTACTTTTTA 58.314 34.615 0.00 0.00 45.36 1.52
2784 2905 7.824779 AGCAGGAGTACCTTCATTACTTTTTAG 59.175 37.037 0.00 0.00 45.36 1.85
2785 2906 7.606839 GCAGGAGTACCTTCATTACTTTTTAGT 59.393 37.037 0.00 0.00 45.36 2.24
2786 2907 9.152595 CAGGAGTACCTTCATTACTTTTTAGTC 57.847 37.037 0.00 0.00 45.36 2.59
2787 2908 9.102453 AGGAGTACCTTCATTACTTTTTAGTCT 57.898 33.333 0.00 0.00 45.36 3.24
2788 2909 9.368674 GGAGTACCTTCATTACTTTTTAGTCTC 57.631 37.037 0.00 0.00 29.58 3.36
2789 2910 9.368674 GAGTACCTTCATTACTTTTTAGTCTCC 57.631 37.037 0.00 0.00 29.58 3.71
2790 2911 8.877195 AGTACCTTCATTACTTTTTAGTCTCCA 58.123 33.333 0.00 0.00 0.00 3.86
2791 2912 9.668497 GTACCTTCATTACTTTTTAGTCTCCAT 57.332 33.333 0.00 0.00 0.00 3.41
2805 2926 9.706691 TTTTAGTCTCCATATAGCTTTTATCCG 57.293 33.333 0.00 0.00 0.00 4.18
2806 2927 8.645814 TTAGTCTCCATATAGCTTTTATCCGA 57.354 34.615 0.00 0.00 0.00 4.55
2807 2928 7.540474 AGTCTCCATATAGCTTTTATCCGAA 57.460 36.000 0.00 0.00 0.00 4.30
2808 2929 8.140112 AGTCTCCATATAGCTTTTATCCGAAT 57.860 34.615 0.00 0.00 0.00 3.34
2809 2930 8.598041 AGTCTCCATATAGCTTTTATCCGAATT 58.402 33.333 0.00 0.00 0.00 2.17
2810 2931 8.874816 GTCTCCATATAGCTTTTATCCGAATTC 58.125 37.037 0.00 0.00 0.00 2.17
2811 2932 8.816894 TCTCCATATAGCTTTTATCCGAATTCT 58.183 33.333 3.52 0.00 0.00 2.40
2820 2941 9.699703 AGCTTTTATCCGAATTCTAAGTATCTC 57.300 33.333 3.52 0.00 0.00 2.75
2821 2942 9.699703 GCTTTTATCCGAATTCTAAGTATCTCT 57.300 33.333 3.52 0.00 0.00 3.10
2904 3025 6.645790 AGATTCATTATGCAATGGAGTTCC 57.354 37.500 0.00 0.00 41.66 3.62
2982 3103 6.822073 AAAGTTTGTAAAATTTGACTCGGC 57.178 33.333 7.22 0.00 35.21 5.54
2983 3104 5.508200 AGTTTGTAAAATTTGACTCGGCA 57.492 34.783 7.22 0.00 0.00 5.69
2984 3105 5.278604 AGTTTGTAAAATTTGACTCGGCAC 58.721 37.500 7.22 0.00 0.00 5.01
2985 3106 4.902443 TTGTAAAATTTGACTCGGCACA 57.098 36.364 7.22 0.00 0.00 4.57
2986 3107 4.902443 TGTAAAATTTGACTCGGCACAA 57.098 36.364 7.22 0.00 0.00 3.33
2987 3108 5.250235 TGTAAAATTTGACTCGGCACAAA 57.750 34.783 7.22 0.00 0.00 2.83
2988 3109 5.837437 TGTAAAATTTGACTCGGCACAAAT 58.163 33.333 7.22 0.00 0.00 2.32
2989 3110 5.918011 TGTAAAATTTGACTCGGCACAAATC 59.082 36.000 7.22 0.00 0.00 2.17
2990 3111 4.853924 AAATTTGACTCGGCACAAATCT 57.146 36.364 0.00 0.00 0.00 2.40
2991 3112 4.853924 AATTTGACTCGGCACAAATCTT 57.146 36.364 0.00 0.00 0.00 2.40
2992 3113 5.957842 AATTTGACTCGGCACAAATCTTA 57.042 34.783 0.00 0.00 0.00 2.10
2993 3114 6.515272 AATTTGACTCGGCACAAATCTTAT 57.485 33.333 0.00 0.00 0.00 1.73
2999 3120 5.597806 ACTCGGCACAAATCTTATAATCGA 58.402 37.500 0.00 0.00 0.00 3.59
3014 3135 4.426112 CGAGAGCCAGCAGACGCA 62.426 66.667 0.00 0.00 42.27 5.24
3034 3164 3.693654 CAATTTTGCTTTGGGTTTGTGC 58.306 40.909 0.00 0.00 0.00 4.57
3040 3170 1.402787 CTTTGGGTTTGTGCCAGAGT 58.597 50.000 0.00 0.00 0.00 3.24
3046 3176 3.320541 TGGGTTTGTGCCAGAGTTAAATG 59.679 43.478 0.00 0.00 0.00 2.32
3057 3187 4.706476 CCAGAGTTAAATGGGCATCTTTCA 59.294 41.667 0.00 0.00 32.63 2.69
3060 3190 5.420104 AGAGTTAAATGGGCATCTTTCAAGG 59.580 40.000 0.00 0.00 0.00 3.61
3068 3198 2.961062 GGCATCTTTCAAGGCCATGTAT 59.039 45.455 5.01 0.00 45.70 2.29
3077 3207 6.713762 TTCAAGGCCATGTATAATGAAAGG 57.286 37.500 5.01 0.00 0.00 3.11
3085 3215 6.239120 GCCATGTATAATGAAAGGTGCTTGAT 60.239 38.462 0.00 0.00 0.00 2.57
3121 3251 8.518151 AAGTTCTTTAAACGACTAGCTTCTAC 57.482 34.615 0.00 0.00 0.00 2.59
3125 3255 8.876275 TCTTTAAACGACTAGCTTCTACAAAA 57.124 30.769 0.00 0.00 0.00 2.44
3173 3303 9.593134 TTTCTCTAAGCATCTTCTCTAAACATC 57.407 33.333 0.00 0.00 0.00 3.06
3177 3307 8.535335 TCTAAGCATCTTCTCTAAACATCTTGT 58.465 33.333 0.00 0.00 0.00 3.16
3213 3343 1.539827 ACTATGTTTGGCTTGAACGGC 59.460 47.619 0.00 0.00 0.00 5.68
3222 3352 1.970917 GCTTGAACGGCCGTGATCTG 61.971 60.000 34.95 22.00 0.00 2.90
3230 3360 1.811266 GCCGTGATCTGCGTCACAT 60.811 57.895 14.46 0.00 46.89 3.21
3240 3370 0.735978 TGCGTCACATCGTCATCACC 60.736 55.000 0.00 0.00 0.00 4.02
3241 3371 1.421410 GCGTCACATCGTCATCACCC 61.421 60.000 0.00 0.00 0.00 4.61
3242 3372 0.108851 CGTCACATCGTCATCACCCA 60.109 55.000 0.00 0.00 0.00 4.51
3243 3373 1.671556 CGTCACATCGTCATCACCCAA 60.672 52.381 0.00 0.00 0.00 4.12
3245 3375 0.721154 CACATCGTCATCACCCAACG 59.279 55.000 0.00 0.00 37.74 4.10
3246 3376 0.391130 ACATCGTCATCACCCAACGG 60.391 55.000 0.00 0.00 37.05 4.44
3247 3377 0.391130 CATCGTCATCACCCAACGGT 60.391 55.000 0.00 0.00 46.31 4.83
3248 3378 1.134936 CATCGTCATCACCCAACGGTA 60.135 52.381 0.00 0.00 42.04 4.02
3249 3379 0.967662 TCGTCATCACCCAACGGTAA 59.032 50.000 0.00 0.00 42.04 2.85
3251 3381 1.734163 GTCATCACCCAACGGTAAGG 58.266 55.000 0.00 0.00 42.04 2.69
3256 3386 2.266689 CCCAACGGTAAGGGTCGG 59.733 66.667 9.76 0.00 40.34 4.79
3258 3388 2.812178 CAACGGTAAGGGTCGGCG 60.812 66.667 0.00 0.00 0.00 6.46
3259 3389 4.073200 AACGGTAAGGGTCGGCGG 62.073 66.667 7.21 0.00 0.00 6.13
3300 3430 4.640771 TGCTTTTCTATGGTCAGACCTT 57.359 40.909 20.82 16.47 39.58 3.50
3330 3467 6.759272 ACAGCTGTTTAGATCAAACTAGTCA 58.241 36.000 15.25 0.00 45.72 3.41
3354 3491 5.664457 TCTGTATTTGCATCACACTCCTAG 58.336 41.667 0.00 0.00 0.00 3.02
3357 3494 6.338146 TGTATTTGCATCACACTCCTAGTAC 58.662 40.000 0.00 0.00 0.00 2.73
3360 3497 5.836821 TTGCATCACACTCCTAGTACTAG 57.163 43.478 21.11 21.11 0.00 2.57
3361 3498 5.112129 TGCATCACACTCCTAGTACTAGA 57.888 43.478 28.07 14.56 35.21 2.43
3371 3509 5.253564 ACTCCTAGTACTAGACCCTCAGTTT 59.746 44.000 28.07 2.11 35.21 2.66
3376 3514 6.742559 AGTACTAGACCCTCAGTTTCAAAA 57.257 37.500 0.00 0.00 0.00 2.44
3454 3593 9.974980 TTTATAGAAAAATGGGTTCTTTGTGTC 57.025 29.630 0.00 0.00 36.69 3.67
3455 3594 5.930837 AGAAAAATGGGTTCTTTGTGTCA 57.069 34.783 0.00 0.00 31.10 3.58
3456 3595 6.293004 AGAAAAATGGGTTCTTTGTGTCAA 57.707 33.333 0.00 0.00 31.10 3.18
3457 3596 6.340522 AGAAAAATGGGTTCTTTGTGTCAAG 58.659 36.000 0.00 0.00 31.10 3.02
3458 3597 5.675684 AAAATGGGTTCTTTGTGTCAAGT 57.324 34.783 0.00 0.00 0.00 3.16
3459 3598 5.675684 AAATGGGTTCTTTGTGTCAAGTT 57.324 34.783 0.00 0.00 0.00 2.66
3460 3599 4.654091 ATGGGTTCTTTGTGTCAAGTTG 57.346 40.909 0.00 0.00 0.00 3.16
3461 3600 2.757868 TGGGTTCTTTGTGTCAAGTTGG 59.242 45.455 2.34 0.00 0.00 3.77
3462 3601 2.481276 GGGTTCTTTGTGTCAAGTTGGC 60.481 50.000 0.00 0.00 0.00 4.52
3463 3602 2.450160 GTTCTTTGTGTCAAGTTGGCG 58.550 47.619 2.48 0.00 0.00 5.69
3464 3603 1.745232 TCTTTGTGTCAAGTTGGCGT 58.255 45.000 2.48 0.00 0.00 5.68
3465 3604 1.400142 TCTTTGTGTCAAGTTGGCGTG 59.600 47.619 2.48 0.00 0.00 5.34
3466 3605 0.453793 TTTGTGTCAAGTTGGCGTGG 59.546 50.000 2.48 0.00 0.00 4.94
3467 3606 1.999071 TTGTGTCAAGTTGGCGTGGC 61.999 55.000 2.48 0.00 0.00 5.01
3468 3607 2.186826 GTGTCAAGTTGGCGTGGCT 61.187 57.895 2.48 0.00 30.17 4.75
3469 3608 1.453015 TGTCAAGTTGGCGTGGCTT 60.453 52.632 2.48 0.00 30.17 4.35
3470 3609 1.008538 GTCAAGTTGGCGTGGCTTG 60.009 57.895 2.34 0.00 40.47 4.01
3471 3610 1.453015 TCAAGTTGGCGTGGCTTGT 60.453 52.632 2.34 0.00 40.14 3.16
3472 3611 1.299316 CAAGTTGGCGTGGCTTGTG 60.299 57.895 0.00 0.00 36.00 3.33
3473 3612 1.752694 AAGTTGGCGTGGCTTGTGT 60.753 52.632 0.00 0.00 0.00 3.72
3474 3613 0.464735 AAGTTGGCGTGGCTTGTGTA 60.465 50.000 0.00 0.00 0.00 2.90
3475 3614 0.884704 AGTTGGCGTGGCTTGTGTAG 60.885 55.000 0.00 0.00 0.00 2.74
3486 3625 3.560902 GCTTGTGTAGCTTTCCTTTCC 57.439 47.619 0.00 0.00 46.77 3.13
3487 3626 2.229062 GCTTGTGTAGCTTTCCTTTCCC 59.771 50.000 0.00 0.00 46.77 3.97
3488 3627 2.579410 TGTGTAGCTTTCCTTTCCCC 57.421 50.000 0.00 0.00 0.00 4.81
3489 3628 2.062636 TGTGTAGCTTTCCTTTCCCCT 58.937 47.619 0.00 0.00 0.00 4.79
3490 3629 2.445525 TGTGTAGCTTTCCTTTCCCCTT 59.554 45.455 0.00 0.00 0.00 3.95
3491 3630 3.117284 TGTGTAGCTTTCCTTTCCCCTTT 60.117 43.478 0.00 0.00 0.00 3.11
3492 3631 3.506455 GTGTAGCTTTCCTTTCCCCTTTC 59.494 47.826 0.00 0.00 0.00 2.62
3493 3632 1.911057 AGCTTTCCTTTCCCCTTTCG 58.089 50.000 0.00 0.00 0.00 3.46
3494 3633 0.243907 GCTTTCCTTTCCCCTTTCGC 59.756 55.000 0.00 0.00 0.00 4.70
3495 3634 1.616159 CTTTCCTTTCCCCTTTCGCA 58.384 50.000 0.00 0.00 0.00 5.10
3496 3635 1.960689 CTTTCCTTTCCCCTTTCGCAA 59.039 47.619 0.00 0.00 0.00 4.85
3497 3636 1.616159 TTCCTTTCCCCTTTCGCAAG 58.384 50.000 0.00 0.00 0.00 4.01
3513 3652 3.457198 GCAAGGCGACTAGAAAAACTC 57.543 47.619 0.00 0.00 42.68 3.01
3514 3653 3.067833 GCAAGGCGACTAGAAAAACTCT 58.932 45.455 0.00 0.00 42.68 3.24
3515 3654 3.498777 GCAAGGCGACTAGAAAAACTCTT 59.501 43.478 0.00 0.00 42.68 2.85
3516 3655 4.377533 GCAAGGCGACTAGAAAAACTCTTC 60.378 45.833 0.00 0.00 42.68 2.87
3517 3656 3.927854 AGGCGACTAGAAAAACTCTTCC 58.072 45.455 0.00 0.00 40.61 3.46
3518 3657 3.579151 AGGCGACTAGAAAAACTCTTCCT 59.421 43.478 0.00 0.00 40.61 3.36
3519 3658 3.927758 GGCGACTAGAAAAACTCTTCCTC 59.072 47.826 0.00 0.00 35.41 3.71
3520 3659 3.927758 GCGACTAGAAAAACTCTTCCTCC 59.072 47.826 0.00 0.00 35.41 4.30
3521 3660 4.496360 CGACTAGAAAAACTCTTCCTCCC 58.504 47.826 0.00 0.00 35.41 4.30
3522 3661 4.621038 CGACTAGAAAAACTCTTCCTCCCC 60.621 50.000 0.00 0.00 35.41 4.81
3523 3662 4.504382 ACTAGAAAAACTCTTCCTCCCCT 58.496 43.478 0.00 0.00 35.41 4.79
3524 3663 4.532916 ACTAGAAAAACTCTTCCTCCCCTC 59.467 45.833 0.00 0.00 35.41 4.30
3525 3664 3.327439 AGAAAAACTCTTCCTCCCCTCA 58.673 45.455 0.00 0.00 0.00 3.86
3526 3665 3.722101 AGAAAAACTCTTCCTCCCCTCAA 59.278 43.478 0.00 0.00 0.00 3.02
3527 3666 4.355287 AGAAAAACTCTTCCTCCCCTCAAT 59.645 41.667 0.00 0.00 0.00 2.57
3528 3667 3.728385 AAACTCTTCCTCCCCTCAATG 57.272 47.619 0.00 0.00 0.00 2.82
3529 3668 2.350863 ACTCTTCCTCCCCTCAATGT 57.649 50.000 0.00 0.00 0.00 2.71
3530 3669 2.192263 ACTCTTCCTCCCCTCAATGTC 58.808 52.381 0.00 0.00 0.00 3.06
3531 3670 1.488393 CTCTTCCTCCCCTCAATGTCC 59.512 57.143 0.00 0.00 0.00 4.02
3532 3671 1.203428 TCTTCCTCCCCTCAATGTCCA 60.203 52.381 0.00 0.00 0.00 4.02
3533 3672 0.991920 TTCCTCCCCTCAATGTCCAC 59.008 55.000 0.00 0.00 0.00 4.02
3534 3673 0.119155 TCCTCCCCTCAATGTCCACT 59.881 55.000 0.00 0.00 0.00 4.00
3535 3674 0.254178 CCTCCCCTCAATGTCCACTG 59.746 60.000 0.00 0.00 0.00 3.66
3536 3675 0.254178 CTCCCCTCAATGTCCACTGG 59.746 60.000 0.00 0.00 0.00 4.00
3537 3676 1.379044 CCCCTCAATGTCCACTGGC 60.379 63.158 0.00 0.00 0.00 4.85
3538 3677 1.746615 CCCTCAATGTCCACTGGCG 60.747 63.158 0.00 0.00 0.00 5.69
3539 3678 1.296392 CCTCAATGTCCACTGGCGA 59.704 57.895 0.00 0.00 0.00 5.54
3540 3679 0.742281 CCTCAATGTCCACTGGCGAG 60.742 60.000 0.00 0.00 0.00 5.03
3541 3680 0.036952 CTCAATGTCCACTGGCGAGT 60.037 55.000 0.00 0.00 0.00 4.18
3542 3681 0.037326 TCAATGTCCACTGGCGAGTC 60.037 55.000 0.00 0.00 0.00 3.36
3543 3682 1.079819 AATGTCCACTGGCGAGTCG 60.080 57.895 8.54 8.54 0.00 4.18
3544 3683 2.507110 AATGTCCACTGGCGAGTCGG 62.507 60.000 15.52 4.76 0.00 4.79
3545 3684 3.681835 GTCCACTGGCGAGTCGGT 61.682 66.667 15.52 0.32 0.00 4.69
3546 3685 3.680786 TCCACTGGCGAGTCGGTG 61.681 66.667 15.52 13.42 42.14 4.94
3548 3687 3.680786 CACTGGCGAGTCGGTGGA 61.681 66.667 15.52 0.00 39.62 4.02
3549 3688 2.680352 ACTGGCGAGTCGGTGGAT 60.680 61.111 15.52 0.00 0.00 3.41
3550 3689 2.283529 ACTGGCGAGTCGGTGGATT 61.284 57.895 15.52 0.00 0.00 3.01
3551 3690 1.519455 CTGGCGAGTCGGTGGATTC 60.519 63.158 15.52 0.00 0.00 2.52
3554 3693 2.582498 CGAGTCGGTGGATTCGCC 60.582 66.667 4.10 0.00 43.79 5.54
3555 3694 2.893398 GAGTCGGTGGATTCGCCT 59.107 61.111 1.15 0.00 41.26 5.52
3556 3695 1.227002 GAGTCGGTGGATTCGCCTC 60.227 63.158 1.15 0.00 41.26 4.70
3557 3696 2.202892 GTCGGTGGATTCGCCTCC 60.203 66.667 1.15 0.00 45.12 4.30
3558 3697 3.467226 TCGGTGGATTCGCCTCCC 61.467 66.667 1.15 0.00 45.69 4.30
3559 3698 4.547367 CGGTGGATTCGCCTCCCC 62.547 72.222 1.15 1.99 45.69 4.81
3560 3699 3.090532 GGTGGATTCGCCTCCCCT 61.091 66.667 0.00 0.00 43.24 4.79
3561 3700 2.506472 GTGGATTCGCCTCCCCTC 59.494 66.667 1.25 0.00 37.63 4.30
3562 3701 2.768344 TGGATTCGCCTCCCCTCC 60.768 66.667 1.25 0.00 37.63 4.30
3563 3702 3.930012 GGATTCGCCTCCCCTCCG 61.930 72.222 0.00 0.00 0.00 4.63
3564 3703 4.610714 GATTCGCCTCCCCTCCGC 62.611 72.222 0.00 0.00 0.00 5.54
3574 3713 4.821589 CCCTCCGCCTGTCGCTTC 62.822 72.222 0.00 0.00 36.73 3.86
3600 3739 3.739613 GTGGCGGGGAGGGGATTT 61.740 66.667 0.00 0.00 0.00 2.17
3601 3740 3.416880 TGGCGGGGAGGGGATTTC 61.417 66.667 0.00 0.00 0.00 2.17
3602 3741 3.097162 GGCGGGGAGGGGATTTCT 61.097 66.667 0.00 0.00 0.00 2.52
3603 3742 2.193248 GCGGGGAGGGGATTTCTG 59.807 66.667 0.00 0.00 0.00 3.02
3604 3743 2.919043 CGGGGAGGGGATTTCTGG 59.081 66.667 0.00 0.00 0.00 3.86
3605 3744 2.001269 CGGGGAGGGGATTTCTGGT 61.001 63.158 0.00 0.00 0.00 4.00
3606 3745 1.615262 GGGGAGGGGATTTCTGGTG 59.385 63.158 0.00 0.00 0.00 4.17
3607 3746 1.076705 GGGAGGGGATTTCTGGTGC 60.077 63.158 0.00 0.00 0.00 5.01
3608 3747 1.076705 GGAGGGGATTTCTGGTGCC 60.077 63.158 0.00 0.00 0.00 5.01
3609 3748 1.076705 GAGGGGATTTCTGGTGCCC 60.077 63.158 0.00 0.00 46.77 5.36
3611 3750 2.440247 GGGATTTCTGGTGCCCCG 60.440 66.667 0.00 0.00 34.39 5.73
3612 3751 2.674754 GGATTTCTGGTGCCCCGA 59.325 61.111 0.00 0.00 0.00 5.14
3613 3752 1.001393 GGATTTCTGGTGCCCCGAA 60.001 57.895 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.608035 GGACGAAAACATCCCTGCCA 60.608 55.000 0.00 0.00 0.00 4.92
18 19 1.558233 ACCTCGAAGGGTAGTTCTGG 58.442 55.000 0.00 0.00 40.58 3.86
20 21 3.806157 GCAAAACCTCGAAGGGTAGTTCT 60.806 47.826 0.00 0.00 30.80 3.01
338 342 2.305927 CTCCCCCTAAAAGAGAGCACAA 59.694 50.000 0.00 0.00 0.00 3.33
490 495 1.732259 AGCACTTCGAATAACCAAGCG 59.268 47.619 0.00 0.00 0.00 4.68
554 588 2.091588 CACGACAAGTAAATCCGAACGG 59.908 50.000 6.94 6.94 0.00 4.44
555 589 2.091588 CCACGACAAGTAAATCCGAACG 59.908 50.000 0.00 0.00 0.00 3.95
556 590 3.062042 ACCACGACAAGTAAATCCGAAC 58.938 45.455 0.00 0.00 0.00 3.95
557 591 3.389925 ACCACGACAAGTAAATCCGAA 57.610 42.857 0.00 0.00 0.00 4.30
558 592 3.389925 AACCACGACAAGTAAATCCGA 57.610 42.857 0.00 0.00 0.00 4.55
559 593 4.477302 AAAACCACGACAAGTAAATCCG 57.523 40.909 0.00 0.00 0.00 4.18
560 594 6.549912 ACTAAAACCACGACAAGTAAATCC 57.450 37.500 0.00 0.00 0.00 3.01
561 595 7.632721 TGAACTAAAACCACGACAAGTAAATC 58.367 34.615 0.00 0.00 0.00 2.17
562 596 7.556733 TGAACTAAAACCACGACAAGTAAAT 57.443 32.000 0.00 0.00 0.00 1.40
563 597 6.981762 TGAACTAAAACCACGACAAGTAAA 57.018 33.333 0.00 0.00 0.00 2.01
564 598 6.981762 TTGAACTAAAACCACGACAAGTAA 57.018 33.333 0.00 0.00 0.00 2.24
565 599 6.981762 TTTGAACTAAAACCACGACAAGTA 57.018 33.333 0.00 0.00 0.00 2.24
566 600 5.883503 TTTGAACTAAAACCACGACAAGT 57.116 34.783 0.00 0.00 0.00 3.16
567 601 7.486551 TCAAATTTGAACTAAAACCACGACAAG 59.513 33.333 18.45 0.00 33.55 3.16
568 602 7.313646 TCAAATTTGAACTAAAACCACGACAA 58.686 30.769 18.45 0.00 33.55 3.18
569 603 6.853720 TCAAATTTGAACTAAAACCACGACA 58.146 32.000 18.45 0.00 33.55 4.35
570 604 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
583 617 7.313646 TGTCGTGGTTTTAGTTCAAATTTGAA 58.686 30.769 26.01 26.01 44.31 2.69
584 618 6.853720 TGTCGTGGTTTTAGTTCAAATTTGA 58.146 32.000 16.91 16.91 34.92 2.69
585 619 7.274686 ACTTGTCGTGGTTTTAGTTCAAATTTG 59.725 33.333 12.15 12.15 0.00 2.32
586 620 7.317390 ACTTGTCGTGGTTTTAGTTCAAATTT 58.683 30.769 0.00 0.00 0.00 1.82
587 621 6.859017 ACTTGTCGTGGTTTTAGTTCAAATT 58.141 32.000 0.00 0.00 0.00 1.82
588 622 6.445357 ACTTGTCGTGGTTTTAGTTCAAAT 57.555 33.333 0.00 0.00 0.00 2.32
589 623 5.883503 ACTTGTCGTGGTTTTAGTTCAAA 57.116 34.783 0.00 0.00 0.00 2.69
590 624 6.981762 TTACTTGTCGTGGTTTTAGTTCAA 57.018 33.333 0.00 0.00 0.00 2.69
591 625 6.981762 TTTACTTGTCGTGGTTTTAGTTCA 57.018 33.333 0.00 0.00 0.00 3.18
592 626 6.788930 CGATTTACTTGTCGTGGTTTTAGTTC 59.211 38.462 0.00 0.00 33.42 3.01
593 627 6.293027 CCGATTTACTTGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 36.17 2.24
594 628 5.178067 CCGATTTACTTGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 36.17 2.24
595 629 5.406175 TCCGATTTACTTGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 36.17 1.85
596 630 5.295950 TCCGATTTACTTGTCGTGGTTTTA 58.704 37.500 0.00 0.00 36.17 1.52
597 631 4.128643 TCCGATTTACTTGTCGTGGTTTT 58.871 39.130 0.00 0.00 36.17 2.43
598 632 3.731089 TCCGATTTACTTGTCGTGGTTT 58.269 40.909 0.00 0.00 36.17 3.27
599 633 3.389925 TCCGATTTACTTGTCGTGGTT 57.610 42.857 0.00 0.00 36.17 3.67
600 634 3.062042 GTTCCGATTTACTTGTCGTGGT 58.938 45.455 0.00 0.00 36.17 4.16
601 635 2.091588 CGTTCCGATTTACTTGTCGTGG 59.908 50.000 0.00 0.00 36.17 4.94
602 636 2.091588 CCGTTCCGATTTACTTGTCGTG 59.908 50.000 0.00 0.00 36.17 4.35
603 637 2.030007 TCCGTTCCGATTTACTTGTCGT 60.030 45.455 0.00 0.00 36.17 4.34
604 638 2.597305 CTCCGTTCCGATTTACTTGTCG 59.403 50.000 0.00 0.00 37.58 4.35
605 639 2.928116 CCTCCGTTCCGATTTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
606 640 2.354403 CCCTCCGTTCCGATTTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
607 641 2.093869 TCCCTCCGTTCCGATTTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
608 642 2.167900 CTCCCTCCGTTCCGATTTACTT 59.832 50.000 0.00 0.00 0.00 2.24
609 643 1.755380 CTCCCTCCGTTCCGATTTACT 59.245 52.381 0.00 0.00 0.00 2.24
610 644 1.479730 ACTCCCTCCGTTCCGATTTAC 59.520 52.381 0.00 0.00 0.00 2.01
611 645 1.856629 ACTCCCTCCGTTCCGATTTA 58.143 50.000 0.00 0.00 0.00 1.40
612 646 1.856629 TACTCCCTCCGTTCCGATTT 58.143 50.000 0.00 0.00 0.00 2.17
613 647 2.083628 ATACTCCCTCCGTTCCGATT 57.916 50.000 0.00 0.00 0.00 3.34
614 648 2.965671 TATACTCCCTCCGTTCCGAT 57.034 50.000 0.00 0.00 0.00 4.18
615 649 2.965671 ATATACTCCCTCCGTTCCGA 57.034 50.000 0.00 0.00 0.00 4.55
616 650 5.884792 ACTAATATATACTCCCTCCGTTCCG 59.115 44.000 0.00 0.00 0.00 4.30
617 651 8.993404 ATACTAATATATACTCCCTCCGTTCC 57.007 38.462 0.00 0.00 0.00 3.62
719 753 8.537728 TTCCCATTTCAGAGTGCATTATTATT 57.462 30.769 0.00 0.00 0.00 1.40
720 754 8.000709 TCTTCCCATTTCAGAGTGCATTATTAT 58.999 33.333 0.00 0.00 0.00 1.28
721 755 7.345691 TCTTCCCATTTCAGAGTGCATTATTA 58.654 34.615 0.00 0.00 0.00 0.98
760 794 4.283722 ACCCGTTATGAATCCATCCTACTC 59.716 45.833 0.00 0.00 34.31 2.59
836 870 1.001293 TCTGCTGCACTGTCTAACCAG 59.999 52.381 0.00 0.00 38.45 4.00
840 874 4.199310 AGTTTTTCTGCTGCACTGTCTAA 58.801 39.130 0.00 0.00 0.00 2.10
841 875 3.808728 AGTTTTTCTGCTGCACTGTCTA 58.191 40.909 0.00 0.00 0.00 2.59
842 876 2.648059 AGTTTTTCTGCTGCACTGTCT 58.352 42.857 0.00 0.00 0.00 3.41
843 877 3.561725 ACTAGTTTTTCTGCTGCACTGTC 59.438 43.478 0.00 0.00 0.00 3.51
875 910 1.613630 AAGGGGGAGCTCGTGATGT 60.614 57.895 7.83 0.00 0.00 3.06
897 932 5.583457 TGAGCACAATTGACTGATATGACAG 59.417 40.000 13.59 0.00 42.78 3.51
956 991 4.299547 TCTCTGCGCTGCGGTGTT 62.300 61.111 24.61 0.00 36.18 3.32
958 993 3.921767 TTCTCTCTGCGCTGCGGTG 62.922 63.158 24.61 8.95 36.18 4.94
961 996 2.431430 TGTTCTCTCTGCGCTGCG 60.431 61.111 19.17 19.17 0.00 5.18
962 997 0.668706 TTCTGTTCTCTCTGCGCTGC 60.669 55.000 9.73 0.00 0.00 5.25
963 998 1.067985 TCTTCTGTTCTCTCTGCGCTG 60.068 52.381 9.73 8.88 0.00 5.18
964 999 1.252175 TCTTCTGTTCTCTCTGCGCT 58.748 50.000 9.73 0.00 0.00 5.92
965 1000 2.071688 TTCTTCTGTTCTCTCTGCGC 57.928 50.000 0.00 0.00 0.00 6.09
1097 1132 3.376935 ATGCTCTCGTCCTTGCCGG 62.377 63.158 0.00 0.00 0.00 6.13
1098 1133 1.880340 GATGCTCTCGTCCTTGCCG 60.880 63.158 0.00 0.00 0.00 5.69
1099 1134 1.880340 CGATGCTCTCGTCCTTGCC 60.880 63.158 1.70 0.00 42.56 4.52
1165 1209 2.028130 ACGCTGGAGATAACTCAGGAG 58.972 52.381 2.13 0.00 44.22 3.69
1172 1216 3.528597 AAAGAGGACGCTGGAGATAAC 57.471 47.619 0.00 0.00 0.00 1.89
1187 1231 2.488545 AGCATCAGAAGCAGCAAAAGAG 59.511 45.455 0.00 0.00 0.00 2.85
1193 1237 1.339727 ACATCAGCATCAGAAGCAGCA 60.340 47.619 0.00 0.00 0.00 4.41
1194 1238 1.064208 CACATCAGCATCAGAAGCAGC 59.936 52.381 0.00 0.00 0.00 5.25
1196 1240 2.629051 CTCACATCAGCATCAGAAGCA 58.371 47.619 0.00 0.00 0.00 3.91
1197 1241 1.941294 CCTCACATCAGCATCAGAAGC 59.059 52.381 0.00 0.00 0.00 3.86
1198 1242 3.459145 CTCCTCACATCAGCATCAGAAG 58.541 50.000 0.00 0.00 0.00 2.85
1206 1257 1.427592 GAAGCGCTCCTCACATCAGC 61.428 60.000 12.06 0.00 0.00 4.26
1220 1271 0.171679 TGCATTGCATTGGAGAAGCG 59.828 50.000 7.38 0.00 31.71 4.68
1227 1278 1.143183 GGCCTCTGCATTGCATTGG 59.857 57.895 12.53 16.94 38.13 3.16
1255 1306 2.820037 GAGCTTCGCCTTTCCCCG 60.820 66.667 0.00 0.00 0.00 5.73
1282 1333 2.101582 AGTCATAGTCATGCTTCCCGAC 59.898 50.000 0.00 0.00 31.73 4.79
1311 1362 3.055458 TCCACCATCATGAGAGCGTTTTA 60.055 43.478 0.09 0.00 0.00 1.52
1331 1382 1.880675 CAGCTGATCTGAATGCCATCC 59.119 52.381 8.42 0.00 45.72 3.51
1332 1383 1.267261 GCAGCTGATCTGAATGCCATC 59.733 52.381 20.43 0.00 45.72 3.51
1380 1432 4.631377 CCGCAACAATGTCAGAGAAATAGA 59.369 41.667 0.00 0.00 0.00 1.98
1403 1455 0.645868 GCCTACGAACAACGATGAGC 59.354 55.000 0.00 0.00 45.77 4.26
1404 1456 2.186076 GAGCCTACGAACAACGATGAG 58.814 52.381 0.00 0.00 45.77 2.90
1549 1601 5.462405 AGTCTGATCACTACGTCAAGAAAC 58.538 41.667 0.00 0.00 0.00 2.78
1580 1632 1.002257 TGCACCATGAATGACCGCT 60.002 52.632 0.00 0.00 0.00 5.52
1620 1682 2.415608 CGACGAGCTGCTCCCCTTA 61.416 63.158 22.97 0.00 0.00 2.69
1710 1772 0.937699 TCGTGGCTTTGAACGACGAG 60.938 55.000 0.00 0.00 43.40 4.18
1713 1775 1.204312 GCTCGTGGCTTTGAACGAC 59.796 57.895 0.00 0.00 43.40 4.34
1717 1779 2.606961 CGCTGCTCGTGGCTTTGAA 61.607 57.895 0.00 0.00 42.39 2.69
1850 1915 3.305516 CCTTGGGTTGGCTGGCAC 61.306 66.667 2.29 0.00 0.00 5.01
1851 1916 4.619320 CCCTTGGGTTGGCTGGCA 62.619 66.667 0.00 0.00 0.00 4.92
1905 2000 4.785453 GACTTGGGGCTGGAGGCG 62.785 72.222 0.00 0.00 42.94 5.52
2012 2107 0.321919 AGCCGTTGACACTGCATCAT 60.322 50.000 0.00 0.00 35.65 2.45
2281 2391 2.254703 TTCCGAGAGTCGCTCTTCGC 62.255 60.000 10.12 0.00 41.35 4.70
2423 2533 3.411351 CGACCGCGACCTTGTTGG 61.411 66.667 8.23 0.00 40.82 3.77
2424 2534 4.072088 GCGACCGCGACCTTGTTG 62.072 66.667 8.23 0.73 40.82 3.33
2547 2657 2.927580 GCTCCCGTCTTCACCGTCA 61.928 63.158 0.00 0.00 0.00 4.35
2649 2769 4.764823 GGGAACATGATTACCAACAAGTCA 59.235 41.667 0.00 0.00 0.00 3.41
2650 2770 5.010282 AGGGAACATGATTACCAACAAGTC 58.990 41.667 0.00 0.00 0.00 3.01
2666 2787 5.617252 GATTAATATGGAACGGAGGGAACA 58.383 41.667 0.00 0.00 0.00 3.18
2667 2788 4.689345 CGATTAATATGGAACGGAGGGAAC 59.311 45.833 0.00 0.00 0.00 3.62
2669 2790 3.899360 ACGATTAATATGGAACGGAGGGA 59.101 43.478 0.00 0.00 0.00 4.20
2670 2791 3.994392 CACGATTAATATGGAACGGAGGG 59.006 47.826 0.00 0.00 0.00 4.30
2671 2792 3.432252 GCACGATTAATATGGAACGGAGG 59.568 47.826 0.00 0.00 0.00 4.30
2673 2794 4.202172 TGAGCACGATTAATATGGAACGGA 60.202 41.667 0.00 0.00 0.00 4.69
2674 2795 4.055360 TGAGCACGATTAATATGGAACGG 58.945 43.478 0.00 0.00 0.00 4.44
2675 2796 5.651172 TTGAGCACGATTAATATGGAACG 57.349 39.130 0.00 0.00 0.00 3.95
2678 2799 4.509970 CCGTTTGAGCACGATTAATATGGA 59.490 41.667 0.00 0.00 43.15 3.41
2680 2801 5.197549 CACCGTTTGAGCACGATTAATATG 58.802 41.667 0.00 0.00 43.15 1.78
2681 2802 4.873827 ACACCGTTTGAGCACGATTAATAT 59.126 37.500 0.00 0.00 43.15 1.28
2682 2803 4.247258 ACACCGTTTGAGCACGATTAATA 58.753 39.130 0.00 0.00 43.15 0.98
2684 2805 2.485903 ACACCGTTTGAGCACGATTAA 58.514 42.857 0.00 0.00 43.15 1.40
2686 2807 2.157834 TACACCGTTTGAGCACGATT 57.842 45.000 0.00 0.00 43.15 3.34
2687 2808 2.094182 AGATACACCGTTTGAGCACGAT 60.094 45.455 0.00 0.00 43.15 3.73
2688 2809 1.271379 AGATACACCGTTTGAGCACGA 59.729 47.619 0.00 0.00 43.15 4.35
2689 2810 1.710013 AGATACACCGTTTGAGCACG 58.290 50.000 0.00 0.00 40.02 5.34
2692 2813 2.888594 TGCTAGATACACCGTTTGAGC 58.111 47.619 0.00 0.00 0.00 4.26
2694 2815 5.079689 TCAATGCTAGATACACCGTTTGA 57.920 39.130 0.00 0.00 0.00 2.69
2695 2816 5.794687 TTCAATGCTAGATACACCGTTTG 57.205 39.130 0.00 0.00 0.00 2.93
2696 2817 7.551262 TGTATTTCAATGCTAGATACACCGTTT 59.449 33.333 0.00 0.00 30.60 3.60
2698 2819 6.578944 TGTATTTCAATGCTAGATACACCGT 58.421 36.000 0.00 0.00 30.60 4.83
2699 2820 7.171508 ACATGTATTTCAATGCTAGATACACCG 59.828 37.037 0.00 0.00 36.40 4.94
2700 2821 8.383318 ACATGTATTTCAATGCTAGATACACC 57.617 34.615 0.00 0.00 36.40 4.16
2709 2830 9.224267 GGATGTATCTACATGTATTTCAATGCT 57.776 33.333 5.91 0.00 46.20 3.79
2710 2831 9.002600 TGGATGTATCTACATGTATTTCAATGC 57.997 33.333 5.91 4.62 46.20 3.56
2740 2861 9.935241 ACTCCTGCTTCATATTACTTGTATATG 57.065 33.333 0.00 0.00 37.33 1.78
2743 2864 8.368668 GGTACTCCTGCTTCATATTACTTGTAT 58.631 37.037 0.00 0.00 0.00 2.29
2744 2865 7.563924 AGGTACTCCTGCTTCATATTACTTGTA 59.436 37.037 0.00 0.00 43.33 2.41
2745 2866 6.384305 AGGTACTCCTGCTTCATATTACTTGT 59.616 38.462 0.00 0.00 43.33 3.16
2746 2867 6.821388 AGGTACTCCTGCTTCATATTACTTG 58.179 40.000 0.00 0.00 43.33 3.16
2747 2868 7.125811 TGAAGGTACTCCTGCTTCATATTACTT 59.874 37.037 7.24 0.00 44.35 2.24
2748 2869 6.611642 TGAAGGTACTCCTGCTTCATATTACT 59.388 38.462 7.24 0.00 44.35 2.24
2749 2870 6.817184 TGAAGGTACTCCTGCTTCATATTAC 58.183 40.000 7.24 0.00 44.35 1.89
2750 2871 7.618019 ATGAAGGTACTCCTGCTTCATATTA 57.382 36.000 17.52 0.00 44.35 0.98
2751 2872 5.957771 TGAAGGTACTCCTGCTTCATATT 57.042 39.130 7.24 0.00 44.35 1.28
2752 2873 6.506538 AATGAAGGTACTCCTGCTTCATAT 57.493 37.500 18.66 10.35 44.35 1.78
2753 2874 5.957771 AATGAAGGTACTCCTGCTTCATA 57.042 39.130 18.66 0.17 44.35 2.15
2754 2875 4.851639 AATGAAGGTACTCCTGCTTCAT 57.148 40.909 14.79 14.79 44.35 2.57
2755 2876 4.777896 AGTAATGAAGGTACTCCTGCTTCA 59.222 41.667 12.12 12.12 44.35 3.02
2756 2877 5.346181 AGTAATGAAGGTACTCCTGCTTC 57.654 43.478 0.00 0.00 44.35 3.86
2757 2878 5.763876 AAGTAATGAAGGTACTCCTGCTT 57.236 39.130 0.00 0.00 44.35 3.91
2758 2879 5.763876 AAAGTAATGAAGGTACTCCTGCT 57.236 39.130 0.00 0.00 44.35 4.24
2759 2880 6.819397 AAAAAGTAATGAAGGTACTCCTGC 57.181 37.500 0.00 0.00 44.35 4.85
2760 2881 9.152595 GACTAAAAAGTAATGAAGGTACTCCTG 57.847 37.037 0.00 0.00 44.35 3.86
2762 2883 9.368674 GAGACTAAAAAGTAATGAAGGTACTCC 57.631 37.037 0.00 0.00 38.49 3.85
2763 2884 9.368674 GGAGACTAAAAAGTAATGAAGGTACTC 57.631 37.037 0.00 0.00 38.49 2.59
2765 2886 9.668497 ATGGAGACTAAAAAGTAATGAAGGTAC 57.332 33.333 0.00 0.00 0.00 3.34
2779 2900 9.706691 CGGATAAAAGCTATATGGAGACTAAAA 57.293 33.333 0.00 0.00 0.00 1.52
2780 2901 9.085645 TCGGATAAAAGCTATATGGAGACTAAA 57.914 33.333 0.00 0.00 0.00 1.85
2781 2902 8.645814 TCGGATAAAAGCTATATGGAGACTAA 57.354 34.615 0.00 0.00 0.00 2.24
2782 2903 8.645814 TTCGGATAAAAGCTATATGGAGACTA 57.354 34.615 0.00 0.00 0.00 2.59
2783 2904 7.540474 TTCGGATAAAAGCTATATGGAGACT 57.460 36.000 0.00 0.00 0.00 3.24
2784 2905 8.779354 AATTCGGATAAAAGCTATATGGAGAC 57.221 34.615 0.00 0.00 0.00 3.36
2785 2906 8.816894 AGAATTCGGATAAAAGCTATATGGAGA 58.183 33.333 0.00 0.00 0.00 3.71
2794 2915 9.699703 GAGATACTTAGAATTCGGATAAAAGCT 57.300 33.333 0.00 0.00 0.00 3.74
2795 2916 9.699703 AGAGATACTTAGAATTCGGATAAAAGC 57.300 33.333 0.00 0.00 0.00 3.51
2878 2999 8.632679 GGAACTCCATTGCATAATGAATCTAAA 58.367 33.333 0.00 0.00 45.21 1.85
2879 3000 7.779326 TGGAACTCCATTGCATAATGAATCTAA 59.221 33.333 0.00 0.00 45.21 2.10
2880 3001 7.289310 TGGAACTCCATTGCATAATGAATCTA 58.711 34.615 0.00 0.00 45.21 1.98
2881 3002 6.131264 TGGAACTCCATTGCATAATGAATCT 58.869 36.000 0.00 0.00 45.21 2.40
2882 3003 6.395426 TGGAACTCCATTGCATAATGAATC 57.605 37.500 0.00 0.00 45.21 2.52
2957 3078 6.474102 GCCGAGTCAAATTTTACAAACTTTGA 59.526 34.615 13.20 13.20 41.90 2.69
2958 3079 6.254589 TGCCGAGTCAAATTTTACAAACTTTG 59.745 34.615 5.36 9.87 38.88 2.77
2959 3080 6.254804 GTGCCGAGTCAAATTTTACAAACTTT 59.745 34.615 5.36 0.00 0.00 2.66
2960 3081 5.746721 GTGCCGAGTCAAATTTTACAAACTT 59.253 36.000 5.36 0.00 0.00 2.66
2961 3082 5.163602 TGTGCCGAGTCAAATTTTACAAACT 60.164 36.000 5.36 0.00 0.00 2.66
2962 3083 5.038033 TGTGCCGAGTCAAATTTTACAAAC 58.962 37.500 5.36 0.00 0.00 2.93
2963 3084 5.250235 TGTGCCGAGTCAAATTTTACAAA 57.750 34.783 5.36 0.00 0.00 2.83
2964 3085 4.902443 TGTGCCGAGTCAAATTTTACAA 57.098 36.364 5.36 0.00 0.00 2.41
2965 3086 4.902443 TTGTGCCGAGTCAAATTTTACA 57.098 36.364 5.36 0.00 0.00 2.41
2966 3087 6.149633 AGATTTGTGCCGAGTCAAATTTTAC 58.850 36.000 10.92 0.00 42.05 2.01
2967 3088 6.325919 AGATTTGTGCCGAGTCAAATTTTA 57.674 33.333 10.92 0.00 42.05 1.52
2968 3089 5.200368 AGATTTGTGCCGAGTCAAATTTT 57.800 34.783 10.92 3.84 42.05 1.82
2969 3090 4.853924 AGATTTGTGCCGAGTCAAATTT 57.146 36.364 10.92 0.00 42.05 1.82
2970 3091 4.853924 AAGATTTGTGCCGAGTCAAATT 57.146 36.364 10.92 0.00 42.05 1.82
2971 3092 7.624360 TTATAAGATTTGTGCCGAGTCAAAT 57.376 32.000 9.92 9.92 43.81 2.32
2972 3093 7.465379 CGATTATAAGATTTGTGCCGAGTCAAA 60.465 37.037 0.00 0.00 37.82 2.69
2973 3094 6.019075 CGATTATAAGATTTGTGCCGAGTCAA 60.019 38.462 0.00 0.00 0.00 3.18
2974 3095 5.462068 CGATTATAAGATTTGTGCCGAGTCA 59.538 40.000 0.00 0.00 0.00 3.41
2975 3096 5.690409 TCGATTATAAGATTTGTGCCGAGTC 59.310 40.000 0.00 0.00 0.00 3.36
2976 3097 5.597806 TCGATTATAAGATTTGTGCCGAGT 58.402 37.500 0.00 0.00 0.00 4.18
2977 3098 5.920840 TCTCGATTATAAGATTTGTGCCGAG 59.079 40.000 0.00 0.00 40.48 4.63
2978 3099 5.838529 TCTCGATTATAAGATTTGTGCCGA 58.161 37.500 0.00 0.00 0.00 5.54
2979 3100 5.388890 GCTCTCGATTATAAGATTTGTGCCG 60.389 44.000 0.00 0.00 0.00 5.69
2980 3101 5.106908 GGCTCTCGATTATAAGATTTGTGCC 60.107 44.000 0.00 0.00 0.00 5.01
2981 3102 5.466728 TGGCTCTCGATTATAAGATTTGTGC 59.533 40.000 0.00 0.00 0.00 4.57
2982 3103 6.347240 GCTGGCTCTCGATTATAAGATTTGTG 60.347 42.308 0.00 0.00 0.00 3.33
2983 3104 5.698545 GCTGGCTCTCGATTATAAGATTTGT 59.301 40.000 0.00 0.00 0.00 2.83
2984 3105 5.698089 TGCTGGCTCTCGATTATAAGATTTG 59.302 40.000 0.00 0.00 0.00 2.32
2985 3106 5.858381 TGCTGGCTCTCGATTATAAGATTT 58.142 37.500 0.00 0.00 0.00 2.17
2986 3107 5.244851 TCTGCTGGCTCTCGATTATAAGATT 59.755 40.000 0.00 0.00 0.00 2.40
2987 3108 4.769488 TCTGCTGGCTCTCGATTATAAGAT 59.231 41.667 0.00 0.00 0.00 2.40
2988 3109 4.022762 GTCTGCTGGCTCTCGATTATAAGA 60.023 45.833 0.00 0.00 0.00 2.10
2989 3110 4.233789 GTCTGCTGGCTCTCGATTATAAG 58.766 47.826 0.00 0.00 0.00 1.73
2990 3111 3.304726 CGTCTGCTGGCTCTCGATTATAA 60.305 47.826 0.00 0.00 0.00 0.98
2991 3112 2.226674 CGTCTGCTGGCTCTCGATTATA 59.773 50.000 0.00 0.00 0.00 0.98
2992 3113 1.000827 CGTCTGCTGGCTCTCGATTAT 60.001 52.381 0.00 0.00 0.00 1.28
2993 3114 0.382158 CGTCTGCTGGCTCTCGATTA 59.618 55.000 0.00 0.00 0.00 1.75
2999 3120 0.607489 AAATTGCGTCTGCTGGCTCT 60.607 50.000 0.00 0.00 43.34 4.09
3014 3135 2.687425 GGCACAAACCCAAAGCAAAATT 59.313 40.909 0.00 0.00 0.00 1.82
3022 3143 1.859302 AACTCTGGCACAAACCCAAA 58.141 45.000 0.00 0.00 38.70 3.28
3025 3155 3.306019 CCATTTAACTCTGGCACAAACCC 60.306 47.826 0.00 0.00 38.70 4.11
3034 3164 4.706476 TGAAAGATGCCCATTTAACTCTGG 59.294 41.667 0.00 0.00 0.00 3.86
3040 3170 3.197549 GGCCTTGAAAGATGCCCATTTAA 59.802 43.478 0.00 0.00 37.94 1.52
3046 3176 0.462789 CATGGCCTTGAAAGATGCCC 59.537 55.000 13.33 0.00 43.35 5.36
3057 3187 4.342092 GCACCTTTCATTATACATGGCCTT 59.658 41.667 3.32 0.00 0.00 4.35
3060 3190 5.067674 TCAAGCACCTTTCATTATACATGGC 59.932 40.000 0.00 0.00 0.00 4.40
3156 3286 8.887717 ACAATACAAGATGTTTAGAGAAGATGC 58.112 33.333 0.00 0.00 0.00 3.91
3184 3314 7.011499 TCAAGCCAAACATAGTTAGACCTAA 57.989 36.000 0.00 0.00 0.00 2.69
3185 3315 6.614694 TCAAGCCAAACATAGTTAGACCTA 57.385 37.500 0.00 0.00 0.00 3.08
3187 3317 5.390567 CGTTCAAGCCAAACATAGTTAGACC 60.391 44.000 0.00 0.00 0.00 3.85
3189 3319 4.693566 CCGTTCAAGCCAAACATAGTTAGA 59.306 41.667 0.00 0.00 0.00 2.10
3194 3324 2.262572 GCCGTTCAAGCCAAACATAG 57.737 50.000 0.00 0.00 0.00 2.23
3222 3352 1.421410 GGGTGATGACGATGTGACGC 61.421 60.000 0.00 0.00 36.70 5.19
3240 3370 2.435410 GCCGACCCTTACCGTTGG 60.435 66.667 0.00 0.00 37.77 3.77
3241 3371 2.812178 CGCCGACCCTTACCGTTG 60.812 66.667 0.00 0.00 0.00 4.10
3242 3372 4.073200 CCGCCGACCCTTACCGTT 62.073 66.667 0.00 0.00 0.00 4.44
3245 3375 2.314415 TATTGCCGCCGACCCTTACC 62.314 60.000 0.00 0.00 0.00 2.85
3246 3376 0.462403 TTATTGCCGCCGACCCTTAC 60.462 55.000 0.00 0.00 0.00 2.34
3247 3377 0.462403 GTTATTGCCGCCGACCCTTA 60.462 55.000 0.00 0.00 0.00 2.69
3248 3378 1.747745 GTTATTGCCGCCGACCCTT 60.748 57.895 0.00 0.00 0.00 3.95
3249 3379 2.124860 GTTATTGCCGCCGACCCT 60.125 61.111 0.00 0.00 0.00 4.34
3251 3381 1.303091 ACAAGTTATTGCCGCCGACC 61.303 55.000 0.00 0.00 40.27 4.79
3253 3383 0.800012 GAACAAGTTATTGCCGCCGA 59.200 50.000 0.00 0.00 40.27 5.54
3254 3384 0.519519 TGAACAAGTTATTGCCGCCG 59.480 50.000 0.00 0.00 40.27 6.46
3255 3385 1.539827 AGTGAACAAGTTATTGCCGCC 59.460 47.619 0.00 0.00 40.27 6.13
3256 3386 2.989422 AGTGAACAAGTTATTGCCGC 57.011 45.000 0.00 0.00 40.27 6.53
3258 3388 6.389906 AGCAAATAGTGAACAAGTTATTGCC 58.610 36.000 0.00 0.00 40.27 4.52
3259 3389 7.873739 AAGCAAATAGTGAACAAGTTATTGC 57.126 32.000 0.00 0.00 40.27 3.56
3324 3461 6.760298 AGTGTGATGCAAATACAGATGACTAG 59.240 38.462 0.00 0.00 0.00 2.57
3330 3467 5.108187 AGGAGTGTGATGCAAATACAGAT 57.892 39.130 0.00 0.00 0.00 2.90
3354 3491 9.668497 ATTATTTTGAAACTGAGGGTCTAGTAC 57.332 33.333 0.00 0.00 0.00 2.73
3434 3573 6.106003 ACTTGACACAAAGAACCCATTTTTC 58.894 36.000 0.00 0.00 0.00 2.29
3437 3576 5.418676 CAACTTGACACAAAGAACCCATTT 58.581 37.500 0.00 0.00 0.00 2.32
3442 3581 2.794631 CGCCAACTTGACACAAAGAACC 60.795 50.000 0.00 0.00 0.00 3.62
3443 3582 2.159435 ACGCCAACTTGACACAAAGAAC 60.159 45.455 0.00 0.00 0.00 3.01
3444 3583 2.088423 ACGCCAACTTGACACAAAGAA 58.912 42.857 0.00 0.00 0.00 2.52
3445 3584 1.400142 CACGCCAACTTGACACAAAGA 59.600 47.619 0.00 0.00 0.00 2.52
3446 3585 1.533756 CCACGCCAACTTGACACAAAG 60.534 52.381 0.00 0.00 0.00 2.77
3447 3586 0.453793 CCACGCCAACTTGACACAAA 59.546 50.000 0.00 0.00 0.00 2.83
3448 3587 1.999071 GCCACGCCAACTTGACACAA 61.999 55.000 0.00 0.00 0.00 3.33
3449 3588 2.477176 GCCACGCCAACTTGACACA 61.477 57.895 0.00 0.00 0.00 3.72
3450 3589 1.724582 AAGCCACGCCAACTTGACAC 61.725 55.000 0.00 0.00 0.00 3.67
3451 3590 1.453015 AAGCCACGCCAACTTGACA 60.453 52.632 0.00 0.00 0.00 3.58
3452 3591 1.008538 CAAGCCACGCCAACTTGAC 60.009 57.895 0.00 0.00 42.71 3.18
3453 3592 1.453015 ACAAGCCACGCCAACTTGA 60.453 52.632 13.08 0.00 42.71 3.02
3454 3593 1.299316 CACAAGCCACGCCAACTTG 60.299 57.895 0.00 0.00 44.98 3.16
3455 3594 0.464735 TACACAAGCCACGCCAACTT 60.465 50.000 0.00 0.00 0.00 2.66
3456 3595 0.884704 CTACACAAGCCACGCCAACT 60.885 55.000 0.00 0.00 0.00 3.16
3457 3596 1.574428 CTACACAAGCCACGCCAAC 59.426 57.895 0.00 0.00 0.00 3.77
3458 3597 2.258013 GCTACACAAGCCACGCCAA 61.258 57.895 0.00 0.00 46.25 4.52
3459 3598 2.668212 GCTACACAAGCCACGCCA 60.668 61.111 0.00 0.00 46.25 5.69
3467 3606 2.820197 GGGGAAAGGAAAGCTACACAAG 59.180 50.000 0.00 0.00 0.00 3.16
3468 3607 2.445525 AGGGGAAAGGAAAGCTACACAA 59.554 45.455 0.00 0.00 0.00 3.33
3469 3608 2.062636 AGGGGAAAGGAAAGCTACACA 58.937 47.619 0.00 0.00 0.00 3.72
3470 3609 2.881111 AGGGGAAAGGAAAGCTACAC 57.119 50.000 0.00 0.00 0.00 2.90
3471 3610 3.763057 GAAAGGGGAAAGGAAAGCTACA 58.237 45.455 0.00 0.00 0.00 2.74
3472 3611 2.747989 CGAAAGGGGAAAGGAAAGCTAC 59.252 50.000 0.00 0.00 0.00 3.58
3473 3612 2.878526 GCGAAAGGGGAAAGGAAAGCTA 60.879 50.000 0.00 0.00 0.00 3.32
3474 3613 1.911057 CGAAAGGGGAAAGGAAAGCT 58.089 50.000 0.00 0.00 0.00 3.74
3475 3614 0.243907 GCGAAAGGGGAAAGGAAAGC 59.756 55.000 0.00 0.00 0.00 3.51
3476 3615 1.616159 TGCGAAAGGGGAAAGGAAAG 58.384 50.000 0.00 0.00 0.00 2.62
3477 3616 1.960689 CTTGCGAAAGGGGAAAGGAAA 59.039 47.619 0.00 0.00 0.00 3.13
3478 3617 1.616159 CTTGCGAAAGGGGAAAGGAA 58.384 50.000 0.00 0.00 0.00 3.36
3479 3618 0.251165 CCTTGCGAAAGGGGAAAGGA 60.251 55.000 15.20 0.00 39.88 3.36
3480 3619 1.877576 GCCTTGCGAAAGGGGAAAGG 61.878 60.000 24.10 0.00 40.33 3.11
3481 3620 1.586541 GCCTTGCGAAAGGGGAAAG 59.413 57.895 24.10 0.00 40.33 2.62
3482 3621 3.771978 GCCTTGCGAAAGGGGAAA 58.228 55.556 24.10 0.00 40.33 3.13
3491 3630 6.583089 AGAGTTTTTCTAGTCGCCTTGCGA 62.583 45.833 7.13 7.13 46.54 5.10
3492 3631 4.406992 AGAGTTTTTCTAGTCGCCTTGCG 61.407 47.826 1.34 1.34 43.67 4.85
3493 3632 3.067833 AGAGTTTTTCTAGTCGCCTTGC 58.932 45.455 0.00 0.00 33.23 4.01
3494 3633 4.152580 GGAAGAGTTTTTCTAGTCGCCTTG 59.847 45.833 0.00 0.00 34.14 3.61
3495 3634 4.040584 AGGAAGAGTTTTTCTAGTCGCCTT 59.959 41.667 0.00 0.00 34.14 4.35
3496 3635 3.579151 AGGAAGAGTTTTTCTAGTCGCCT 59.421 43.478 0.00 0.00 34.14 5.52
3497 3636 3.927758 GAGGAAGAGTTTTTCTAGTCGCC 59.072 47.826 0.00 0.00 34.14 5.54
3498 3637 3.927758 GGAGGAAGAGTTTTTCTAGTCGC 59.072 47.826 0.00 0.00 34.14 5.19
3499 3638 4.496360 GGGAGGAAGAGTTTTTCTAGTCG 58.504 47.826 0.00 0.00 34.14 4.18
3500 3639 4.532916 AGGGGAGGAAGAGTTTTTCTAGTC 59.467 45.833 0.00 0.00 34.14 2.59
3501 3640 4.504382 AGGGGAGGAAGAGTTTTTCTAGT 58.496 43.478 0.00 0.00 34.14 2.57
3502 3641 4.532521 TGAGGGGAGGAAGAGTTTTTCTAG 59.467 45.833 0.00 0.00 34.14 2.43
3503 3642 4.499472 TGAGGGGAGGAAGAGTTTTTCTA 58.501 43.478 0.00 0.00 34.14 2.10
3504 3643 3.327439 TGAGGGGAGGAAGAGTTTTTCT 58.673 45.455 0.00 0.00 37.93 2.52
3505 3644 3.790089 TGAGGGGAGGAAGAGTTTTTC 57.210 47.619 0.00 0.00 0.00 2.29
3506 3645 4.140924 ACATTGAGGGGAGGAAGAGTTTTT 60.141 41.667 0.00 0.00 0.00 1.94
3507 3646 3.399305 ACATTGAGGGGAGGAAGAGTTTT 59.601 43.478 0.00 0.00 0.00 2.43
3508 3647 2.989571 ACATTGAGGGGAGGAAGAGTTT 59.010 45.455 0.00 0.00 0.00 2.66
3509 3648 2.573915 GACATTGAGGGGAGGAAGAGTT 59.426 50.000 0.00 0.00 0.00 3.01
3510 3649 2.192263 GACATTGAGGGGAGGAAGAGT 58.808 52.381 0.00 0.00 0.00 3.24
3511 3650 1.488393 GGACATTGAGGGGAGGAAGAG 59.512 57.143 0.00 0.00 0.00 2.85
3512 3651 1.203428 TGGACATTGAGGGGAGGAAGA 60.203 52.381 0.00 0.00 0.00 2.87
3513 3652 1.065126 GTGGACATTGAGGGGAGGAAG 60.065 57.143 0.00 0.00 0.00 3.46
3514 3653 0.991920 GTGGACATTGAGGGGAGGAA 59.008 55.000 0.00 0.00 0.00 3.36
3515 3654 0.119155 AGTGGACATTGAGGGGAGGA 59.881 55.000 0.00 0.00 0.00 3.71
3516 3655 0.254178 CAGTGGACATTGAGGGGAGG 59.746 60.000 0.00 0.00 0.00 4.30
3517 3656 0.254178 CCAGTGGACATTGAGGGGAG 59.746 60.000 1.68 0.00 0.00 4.30
3518 3657 1.852157 GCCAGTGGACATTGAGGGGA 61.852 60.000 15.20 0.00 0.00 4.81
3519 3658 1.379044 GCCAGTGGACATTGAGGGG 60.379 63.158 15.20 0.00 0.00 4.79
3520 3659 1.746615 CGCCAGTGGACATTGAGGG 60.747 63.158 15.20 0.00 0.00 4.30
3521 3660 0.742281 CTCGCCAGTGGACATTGAGG 60.742 60.000 15.20 0.00 0.00 3.86
3522 3661 0.036952 ACTCGCCAGTGGACATTGAG 60.037 55.000 15.20 12.95 0.00 3.02
3523 3662 0.037326 GACTCGCCAGTGGACATTGA 60.037 55.000 15.20 0.81 30.63 2.57
3524 3663 1.354337 CGACTCGCCAGTGGACATTG 61.354 60.000 15.20 0.00 30.63 2.82
3525 3664 1.079819 CGACTCGCCAGTGGACATT 60.080 57.895 15.20 0.00 30.63 2.71
3526 3665 2.573869 CGACTCGCCAGTGGACAT 59.426 61.111 15.20 0.00 30.63 3.06
3527 3666 3.680786 CCGACTCGCCAGTGGACA 61.681 66.667 15.20 0.00 30.63 4.02
3528 3667 3.681835 ACCGACTCGCCAGTGGAC 61.682 66.667 15.20 3.16 30.63 4.02
3529 3668 3.680786 CACCGACTCGCCAGTGGA 61.681 66.667 15.20 0.00 30.63 4.02
3530 3669 4.742201 CCACCGACTCGCCAGTGG 62.742 72.222 4.20 4.20 43.50 4.00
3531 3670 2.507110 AATCCACCGACTCGCCAGTG 62.507 60.000 0.00 0.00 30.63 3.66
3532 3671 2.227089 GAATCCACCGACTCGCCAGT 62.227 60.000 0.00 0.00 34.57 4.00
3533 3672 1.519455 GAATCCACCGACTCGCCAG 60.519 63.158 0.00 0.00 0.00 4.85
3534 3673 2.577059 GAATCCACCGACTCGCCA 59.423 61.111 0.00 0.00 0.00 5.69
3535 3674 2.582498 CGAATCCACCGACTCGCC 60.582 66.667 0.00 0.00 0.00 5.54
3537 3676 2.582498 GGCGAATCCACCGACTCG 60.582 66.667 0.00 0.00 34.01 4.18
3538 3677 2.893398 AGGCGAATCCACCGACTC 59.107 61.111 0.00 0.00 42.52 3.36
3540 3679 2.202892 GGAGGCGAATCCACCGAC 60.203 66.667 1.72 0.00 39.34 4.79
3541 3680 3.467226 GGGAGGCGAATCCACCGA 61.467 66.667 8.41 0.00 45.51 4.69
3542 3681 4.547367 GGGGAGGCGAATCCACCG 62.547 72.222 8.41 0.00 45.51 4.94
3543 3682 3.090532 AGGGGAGGCGAATCCACC 61.091 66.667 5.06 5.61 44.56 4.61
3544 3683 2.506472 GAGGGGAGGCGAATCCAC 59.494 66.667 8.41 4.71 43.73 4.02
3545 3684 2.768344 GGAGGGGAGGCGAATCCA 60.768 66.667 8.41 0.00 41.52 3.41
3546 3685 3.930012 CGGAGGGGAGGCGAATCC 61.930 72.222 0.00 0.00 38.76 3.01
3547 3686 4.610714 GCGGAGGGGAGGCGAATC 62.611 72.222 0.00 0.00 0.00 2.52
3583 3722 3.716204 GAAATCCCCTCCCCGCCAC 62.716 68.421 0.00 0.00 0.00 5.01
3584 3723 3.416880 GAAATCCCCTCCCCGCCA 61.417 66.667 0.00 0.00 0.00 5.69
3585 3724 3.097162 AGAAATCCCCTCCCCGCC 61.097 66.667 0.00 0.00 0.00 6.13
3586 3725 2.193248 CAGAAATCCCCTCCCCGC 59.807 66.667 0.00 0.00 0.00 6.13
3587 3726 2.001269 ACCAGAAATCCCCTCCCCG 61.001 63.158 0.00 0.00 0.00 5.73
3588 3727 1.615262 CACCAGAAATCCCCTCCCC 59.385 63.158 0.00 0.00 0.00 4.81
3589 3728 1.076705 GCACCAGAAATCCCCTCCC 60.077 63.158 0.00 0.00 0.00 4.30
3590 3729 1.076705 GGCACCAGAAATCCCCTCC 60.077 63.158 0.00 0.00 0.00 4.30
3591 3730 4.666105 GGCACCAGAAATCCCCTC 57.334 61.111 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.