Multiple sequence alignment - TraesCS2A01G133500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G133500 chr2A 100.000 2754 0 0 2998 5751 80265907 80268660 0.000000e+00 5086.0
1 TraesCS2A01G133500 chr2A 100.000 2704 0 0 1 2704 80262910 80265613 0.000000e+00 4994.0
2 TraesCS2A01G133500 chr2A 86.499 874 63 31 1098 1925 80475644 80476508 0.000000e+00 909.0
3 TraesCS2A01G133500 chr2A 83.835 266 40 2 2019 2281 80476585 80476850 3.440000e-62 250.0
4 TraesCS2A01G133500 chr2A 87.317 205 19 5 3553 3755 555224814 555225013 1.610000e-55 228.0
5 TraesCS2A01G133500 chr2A 100.000 46 0 0 4736 4781 80267601 80267646 1.030000e-12 86.1
6 TraesCS2A01G133500 chr2A 100.000 46 0 0 4692 4737 80267645 80267690 1.030000e-12 86.1
7 TraesCS2A01G133500 chr2D 91.547 2153 113 38 580 2704 79685486 79687597 0.000000e+00 2904.0
8 TraesCS2A01G133500 chr2D 91.924 681 17 7 5109 5751 79690338 79691018 0.000000e+00 918.0
9 TraesCS2A01G133500 chr2D 88.415 751 60 13 1193 1925 79873886 79874627 0.000000e+00 880.0
10 TraesCS2A01G133500 chr2D 88.016 751 53 17 1200 1925 42934396 42933658 0.000000e+00 854.0
11 TraesCS2A01G133500 chr2D 89.929 566 33 10 4174 4737 79689049 79689592 0.000000e+00 708.0
12 TraesCS2A01G133500 chr2D 93.603 469 16 2 3040 3508 79688011 79688465 0.000000e+00 688.0
13 TraesCS2A01G133500 chr2D 92.750 400 12 5 3784 4175 79688499 79688889 3.890000e-156 562.0
14 TraesCS2A01G133500 chr2D 96.633 297 10 0 277 573 174243000 174242704 1.440000e-135 494.0
15 TraesCS2A01G133500 chr2D 96.321 299 11 0 277 575 67564975 67565273 5.180000e-135 492.0
16 TraesCS2A01G133500 chr2D 95.695 302 13 0 277 578 68861409 68861108 2.410000e-133 486.0
17 TraesCS2A01G133500 chr2D 92.138 318 12 4 4798 5102 79689982 79690299 2.460000e-118 436.0
18 TraesCS2A01G133500 chr2D 91.051 257 21 1 4851 5105 4008748 4009004 4.270000e-91 346.0
19 TraesCS2A01G133500 chr2D 84.586 266 41 0 2019 2284 42933556 42933291 1.230000e-66 265.0
20 TraesCS2A01G133500 chr2D 82.353 272 39 6 2019 2281 79874726 79874997 1.610000e-55 228.0
21 TraesCS2A01G133500 chr2D 87.349 166 19 2 2373 2537 305517736 305517900 7.610000e-44 189.0
22 TraesCS2A01G133500 chr2D 98.333 60 1 0 4736 4795 79689547 79689606 7.880000e-19 106.0
23 TraesCS2A01G133500 chr2D 100.000 33 0 0 53 85 506164272 506164240 1.730000e-05 62.1
24 TraesCS2A01G133500 chr2B 91.355 1793 94 29 579 2340 131179549 131181311 0.000000e+00 2396.0
25 TraesCS2A01G133500 chr2B 90.560 678 43 11 1263 1925 131286334 131287005 0.000000e+00 878.0
26 TraesCS2A01G133500 chr2B 97.701 174 4 0 4444 4617 131182994 131183167 3.370000e-77 300.0
27 TraesCS2A01G133500 chr2B 92.647 204 13 2 3198 3400 131181964 131182166 5.640000e-75 292.0
28 TraesCS2A01G133500 chr2B 81.170 393 44 10 3785 4173 131182346 131182712 7.290000e-74 289.0
29 TraesCS2A01G133500 chr2B 87.963 216 23 3 3000 3213 131181531 131181745 9.570000e-63 252.0
30 TraesCS2A01G133500 chr2B 90.000 160 15 1 4182 4341 131182759 131182917 7.550000e-49 206.0
31 TraesCS2A01G133500 chr2B 84.574 188 25 1 4428 4615 131290092 131290275 3.540000e-42 183.0
32 TraesCS2A01G133500 chr2B 86.127 173 20 3 2366 2536 509995322 509995492 3.540000e-42 183.0
33 TraesCS2A01G133500 chr4D 89.560 728 30 15 4854 5535 509659556 509658829 0.000000e+00 881.0
34 TraesCS2A01G133500 chr7D 88.211 738 41 18 4844 5535 537664924 537665661 0.000000e+00 839.0
35 TraesCS2A01G133500 chr7D 89.083 229 12 2 5536 5751 569211548 569211776 7.340000e-69 272.0
36 TraesCS2A01G133500 chr4A 85.048 729 56 18 4854 5535 706036194 706035472 0.000000e+00 693.0
37 TraesCS2A01G133500 chr4A 89.262 447 30 6 5105 5535 705965383 705964939 1.410000e-150 544.0
38 TraesCS2A01G133500 chr4A 89.262 447 30 7 5105 5535 706101947 706101503 1.410000e-150 544.0
39 TraesCS2A01G133500 chr4A 89.038 447 31 6 5105 5535 707166591 707167035 6.560000e-149 538.0
40 TraesCS2A01G133500 chr4A 88.814 447 32 6 5105 5535 705912439 705911995 3.050000e-147 532.0
41 TraesCS2A01G133500 chr5D 82.791 738 77 24 4846 5535 51326254 51325519 1.060000e-171 614.0
42 TraesCS2A01G133500 chr5D 82.520 738 79 24 4846 5535 51249691 51248956 2.290000e-168 603.0
43 TraesCS2A01G133500 chr5D 95.681 301 12 1 277 576 469726382 469726682 3.120000e-132 483.0
44 TraesCS2A01G133500 chr5D 96.689 151 4 1 3607 3756 422461611 422461461 3.440000e-62 250.0
45 TraesCS2A01G133500 chr5D 86.047 172 20 4 2366 2536 150835736 150835568 1.270000e-41 182.0
46 TraesCS2A01G133500 chr5D 72.811 434 92 21 1448 1871 357065208 357064791 2.180000e-24 124.0
47 TraesCS2A01G133500 chr5A 82.787 732 78 21 4851 5535 45445201 45445931 1.370000e-170 610.0
48 TraesCS2A01G133500 chr5A 89.412 85 9 0 579 663 540627261 540627177 2.190000e-19 108.0
49 TraesCS2A01G133500 chr5A 87.209 86 10 1 579 664 491733071 491733155 4.740000e-16 97.1
50 TraesCS2A01G133500 chr6B 90.179 448 27 7 5105 5535 408653002 408653449 8.360000e-158 568.0
51 TraesCS2A01G133500 chrUn 89.038 447 31 9 5105 5535 359189632 359189188 6.560000e-149 538.0
52 TraesCS2A01G133500 chrUn 88.591 447 33 8 5105 5535 229439690 229439246 1.420000e-145 527.0
53 TraesCS2A01G133500 chrUn 88.591 447 33 8 5105 5535 357528107 357527663 1.420000e-145 527.0
54 TraesCS2A01G133500 chrUn 88.362 232 9 4 5536 5751 480353117 480352888 4.420000e-66 263.0
55 TraesCS2A01G133500 chr5B 87.295 488 32 11 4854 5311 12548973 12548486 1.100000e-146 531.0
56 TraesCS2A01G133500 chr5B 94.444 180 10 0 5356 5535 12357105 12356926 1.580000e-70 278.0
57 TraesCS2A01G133500 chr5B 74.253 435 90 18 1448 1871 421861409 421860986 4.610000e-36 163.0
58 TraesCS2A01G133500 chr6D 96.370 303 10 1 277 578 8030080 8030382 1.110000e-136 497.0
59 TraesCS2A01G133500 chr6D 95.469 309 13 1 277 585 467983303 467983610 5.180000e-135 492.0
60 TraesCS2A01G133500 chr6D 87.745 204 19 4 3554 3756 382175932 382176130 3.460000e-57 233.0
61 TraesCS2A01G133500 chr6D 86.982 169 18 3 2374 2540 90112238 90112404 2.740000e-43 187.0
62 TraesCS2A01G133500 chr6D 87.209 86 9 2 579 662 137491926 137492011 4.740000e-16 97.1
63 TraesCS2A01G133500 chr1D 96.644 298 10 0 277 574 48019533 48019830 4.000000e-136 496.0
64 TraesCS2A01G133500 chr1D 96.333 300 11 0 277 576 244556173 244556472 1.440000e-135 494.0
65 TraesCS2A01G133500 chr1D 96.321 299 11 0 277 575 228950292 228949994 5.180000e-135 492.0
66 TraesCS2A01G133500 chr1D 91.160 181 15 1 3609 3788 27972149 27972329 1.600000e-60 244.0
67 TraesCS2A01G133500 chr1D 75.273 275 58 9 1655 1924 72906536 72906267 7.830000e-24 122.0
68 TraesCS2A01G133500 chr7A 88.362 232 9 4 5536 5751 576454663 576454434 4.420000e-66 263.0
69 TraesCS2A01G133500 chr7A 88.362 232 9 4 5536 5751 658636938 658637167 4.420000e-66 263.0
70 TraesCS2A01G133500 chr7A 83.258 221 16 7 3552 3752 414795718 414795937 3.540000e-42 183.0
71 TraesCS2A01G133500 chr7A 85.795 176 20 4 2367 2540 494786821 494786993 1.270000e-41 182.0
72 TraesCS2A01G133500 chr7A 85.246 122 13 3 1441 1562 720912008 720912124 2.810000e-23 121.0
73 TraesCS2A01G133500 chr7A 90.588 85 8 0 579 663 50167966 50168050 4.710000e-21 113.0
74 TraesCS2A01G133500 chr7A 89.412 85 9 0 579 663 649416494 649416578 2.190000e-19 108.0
75 TraesCS2A01G133500 chr3D 96.667 150 5 0 3607 3756 305497342 305497193 3.440000e-62 250.0
76 TraesCS2A01G133500 chr3D 86.628 172 18 5 2370 2540 87926164 87925997 9.840000e-43 185.0
77 TraesCS2A01G133500 chr1A 88.018 217 19 4 3551 3765 505298960 505298749 3.440000e-62 250.0
78 TraesCS2A01G133500 chr1A 89.412 85 9 0 579 663 539744654 539744570 2.190000e-19 108.0
79 TraesCS2A01G133500 chr3B 89.637 193 15 3 3607 3794 23442011 23441819 2.070000e-59 241.0
80 TraesCS2A01G133500 chr7B 87.745 204 19 4 3556 3754 421521509 421521307 3.460000e-57 233.0
81 TraesCS2A01G133500 chr7B 96.000 50 2 0 5702 5751 625892562 625892513 1.330000e-11 82.4
82 TraesCS2A01G133500 chr6A 87.019 208 22 2 3550 3756 520317795 520317998 4.480000e-56 230.0
83 TraesCS2A01G133500 chr6A 86.905 168 17 5 2374 2540 27786387 27786224 3.540000e-42 183.0
84 TraesCS2A01G133500 chr6A 89.412 85 9 0 579 663 373206696 373206780 2.190000e-19 108.0
85 TraesCS2A01G133500 chr1B 86.628 172 19 3 2371 2541 521219374 521219542 2.740000e-43 187.0
86 TraesCS2A01G133500 chr3A 82.028 217 37 2 1656 1871 115849158 115848943 3.540000e-42 183.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G133500 chr2A 80262910 80268660 5750 False 2563.050000 5086 100.000000 1 5751 4 chr2A.!!$F2 5750
1 TraesCS2A01G133500 chr2A 80475644 80476850 1206 False 579.500000 909 85.167000 1098 2281 2 chr2A.!!$F3 1183
2 TraesCS2A01G133500 chr2D 79685486 79691018 5532 False 903.142857 2904 92.889143 580 5751 7 chr2D.!!$F4 5171
3 TraesCS2A01G133500 chr2D 42933291 42934396 1105 True 559.500000 854 86.301000 1200 2284 2 chr2D.!!$R4 1084
4 TraesCS2A01G133500 chr2D 79873886 79874997 1111 False 554.000000 880 85.384000 1193 2281 2 chr2D.!!$F5 1088
5 TraesCS2A01G133500 chr2B 131179549 131183167 3618 False 622.500000 2396 90.139333 579 4617 6 chr2B.!!$F2 4038
6 TraesCS2A01G133500 chr2B 131286334 131290275 3941 False 530.500000 878 87.567000 1263 4615 2 chr2B.!!$F3 3352
7 TraesCS2A01G133500 chr4D 509658829 509659556 727 True 881.000000 881 89.560000 4854 5535 1 chr4D.!!$R1 681
8 TraesCS2A01G133500 chr7D 537664924 537665661 737 False 839.000000 839 88.211000 4844 5535 1 chr7D.!!$F1 691
9 TraesCS2A01G133500 chr4A 706035472 706036194 722 True 693.000000 693 85.048000 4854 5535 1 chr4A.!!$R3 681
10 TraesCS2A01G133500 chr5D 51325519 51326254 735 True 614.000000 614 82.791000 4846 5535 1 chr5D.!!$R2 689
11 TraesCS2A01G133500 chr5D 51248956 51249691 735 True 603.000000 603 82.520000 4846 5535 1 chr5D.!!$R1 689
12 TraesCS2A01G133500 chr5A 45445201 45445931 730 False 610.000000 610 82.787000 4851 5535 1 chr5A.!!$F1 684

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
419 420 0.108329 GCCTAGCTAACACGCCTTCA 60.108 55.0 0.00 0.00 0.00 3.02 F
527 528 0.173029 CAATAAAGTGGCCGCATGCA 59.827 50.0 20.59 0.22 43.89 3.96 F
545 546 0.250381 CATCTCCCAGATGCAGAGGC 60.250 60.0 0.61 0.00 44.69 4.70 F
2001 2109 0.881600 ATGCATGCTAAGCGATGCGA 60.882 50.0 20.33 0.00 41.88 5.10 F
2232 2405 0.524816 ACTACAACATCTACGCGCCG 60.525 55.0 5.73 0.00 0.00 6.46 F
2628 2802 0.889186 ACGTCATGTTTCAGGGGCAC 60.889 55.0 0.00 0.00 0.00 5.01 F
4455 6707 0.249911 GTGAACGAACTCAGGGTGCT 60.250 55.0 0.00 0.00 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1552 1610 0.686769 AGTAGGGGTTGCGGTAGAGG 60.687 60.000 0.00 0.00 0.00 3.69 R
1982 2090 0.881600 TCGCATCGCTTAGCATGCAT 60.882 50.000 27.37 7.68 40.37 3.96 R
2232 2405 1.376037 CCCTTCCGTCTGGCAGTTC 60.376 63.158 15.27 8.26 34.14 3.01 R
3007 3182 0.389296 TCCCACGCGTGTATTCACTG 60.389 55.000 34.81 18.17 41.89 3.66 R
4214 6335 1.148157 CCGCTGCGAAGATCGTTGAT 61.148 55.000 25.45 0.00 42.81 2.57 R
4624 6876 0.108207 CCATCTGCCATCTCCCTGAC 59.892 60.000 0.00 0.00 0.00 3.51 R
5362 8052 0.689623 GCCAATCTCGGAGGATGGAT 59.310 55.000 24.79 3.16 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.949313 GTTCCTGTGAATCGAACGC 57.051 52.632 0.00 0.00 31.98 4.84
22 23 1.429463 GTTCCTGTGAATCGAACGCT 58.571 50.000 0.00 0.00 31.98 5.07
23 24 2.602878 GTTCCTGTGAATCGAACGCTA 58.397 47.619 0.00 0.00 31.98 4.26
24 25 2.273370 TCCTGTGAATCGAACGCTAC 57.727 50.000 0.00 0.00 0.00 3.58
25 26 1.816835 TCCTGTGAATCGAACGCTACT 59.183 47.619 0.00 0.00 0.00 2.57
26 27 2.230508 TCCTGTGAATCGAACGCTACTT 59.769 45.455 0.00 0.00 0.00 2.24
27 28 2.993899 CCTGTGAATCGAACGCTACTTT 59.006 45.455 0.00 0.00 0.00 2.66
28 29 3.060895 CCTGTGAATCGAACGCTACTTTC 59.939 47.826 0.00 0.00 0.00 2.62
29 30 3.644823 TGTGAATCGAACGCTACTTTCA 58.355 40.909 0.00 0.00 0.00 2.69
30 31 4.242475 TGTGAATCGAACGCTACTTTCAT 58.758 39.130 0.00 0.00 0.00 2.57
31 32 5.404096 TGTGAATCGAACGCTACTTTCATA 58.596 37.500 0.00 0.00 0.00 2.15
32 33 5.865013 TGTGAATCGAACGCTACTTTCATAA 59.135 36.000 0.00 0.00 0.00 1.90
33 34 6.366604 TGTGAATCGAACGCTACTTTCATAAA 59.633 34.615 0.00 0.00 0.00 1.40
34 35 7.095565 TGTGAATCGAACGCTACTTTCATAAAA 60.096 33.333 0.00 0.00 0.00 1.52
35 36 7.213891 GTGAATCGAACGCTACTTTCATAAAAC 59.786 37.037 0.00 0.00 0.00 2.43
36 37 6.963049 ATCGAACGCTACTTTCATAAAACT 57.037 33.333 0.00 0.00 0.00 2.66
37 38 6.774354 TCGAACGCTACTTTCATAAAACTT 57.226 33.333 0.00 0.00 0.00 2.66
38 39 7.181143 TCGAACGCTACTTTCATAAAACTTT 57.819 32.000 0.00 0.00 0.00 2.66
39 40 7.285788 TCGAACGCTACTTTCATAAAACTTTC 58.714 34.615 0.00 0.00 0.00 2.62
40 41 6.518736 CGAACGCTACTTTCATAAAACTTTCC 59.481 38.462 0.00 0.00 0.00 3.13
41 42 6.250344 ACGCTACTTTCATAAAACTTTCCC 57.750 37.500 0.00 0.00 0.00 3.97
42 43 6.002082 ACGCTACTTTCATAAAACTTTCCCT 58.998 36.000 0.00 0.00 0.00 4.20
43 44 6.489022 ACGCTACTTTCATAAAACTTTCCCTT 59.511 34.615 0.00 0.00 0.00 3.95
44 45 6.801862 CGCTACTTTCATAAAACTTTCCCTTG 59.198 38.462 0.00 0.00 0.00 3.61
45 46 7.521585 CGCTACTTTCATAAAACTTTCCCTTGT 60.522 37.037 0.00 0.00 0.00 3.16
46 47 8.141909 GCTACTTTCATAAAACTTTCCCTTGTT 58.858 33.333 0.00 0.00 0.00 2.83
48 49 8.942338 ACTTTCATAAAACTTTCCCTTGTTTC 57.058 30.769 0.00 0.00 35.63 2.78
49 50 8.758829 ACTTTCATAAAACTTTCCCTTGTTTCT 58.241 29.630 0.00 0.00 35.63 2.52
50 51 9.599866 CTTTCATAAAACTTTCCCTTGTTTCTT 57.400 29.630 0.00 0.00 35.63 2.52
51 52 9.594478 TTTCATAAAACTTTCCCTTGTTTCTTC 57.406 29.630 0.00 0.00 35.63 2.87
52 53 8.533569 TCATAAAACTTTCCCTTGTTTCTTCT 57.466 30.769 0.00 0.00 35.63 2.85
53 54 8.977412 TCATAAAACTTTCCCTTGTTTCTTCTT 58.023 29.630 0.00 0.00 35.63 2.52
54 55 9.249457 CATAAAACTTTCCCTTGTTTCTTCTTC 57.751 33.333 0.00 0.00 35.63 2.87
55 56 5.854010 AACTTTCCCTTGTTTCTTCTTCC 57.146 39.130 0.00 0.00 0.00 3.46
56 57 5.130705 ACTTTCCCTTGTTTCTTCTTCCT 57.869 39.130 0.00 0.00 0.00 3.36
57 58 4.889995 ACTTTCCCTTGTTTCTTCTTCCTG 59.110 41.667 0.00 0.00 0.00 3.86
58 59 4.519906 TTCCCTTGTTTCTTCTTCCTGT 57.480 40.909 0.00 0.00 0.00 4.00
59 60 5.640158 TTCCCTTGTTTCTTCTTCCTGTA 57.360 39.130 0.00 0.00 0.00 2.74
60 61 4.969484 TCCCTTGTTTCTTCTTCCTGTAC 58.031 43.478 0.00 0.00 0.00 2.90
61 62 4.658901 TCCCTTGTTTCTTCTTCCTGTACT 59.341 41.667 0.00 0.00 0.00 2.73
62 63 5.132144 TCCCTTGTTTCTTCTTCCTGTACTT 59.868 40.000 0.00 0.00 0.00 2.24
63 64 5.828328 CCCTTGTTTCTTCTTCCTGTACTTT 59.172 40.000 0.00 0.00 0.00 2.66
64 65 6.321435 CCCTTGTTTCTTCTTCCTGTACTTTT 59.679 38.462 0.00 0.00 0.00 2.27
65 66 7.418408 CCTTGTTTCTTCTTCCTGTACTTTTC 58.582 38.462 0.00 0.00 0.00 2.29
66 67 6.937436 TGTTTCTTCTTCCTGTACTTTTCC 57.063 37.500 0.00 0.00 0.00 3.13
67 68 6.659824 TGTTTCTTCTTCCTGTACTTTTCCT 58.340 36.000 0.00 0.00 0.00 3.36
68 69 6.766467 TGTTTCTTCTTCCTGTACTTTTCCTC 59.234 38.462 0.00 0.00 0.00 3.71
69 70 5.485209 TCTTCTTCCTGTACTTTTCCTCC 57.515 43.478 0.00 0.00 0.00 4.30
70 71 4.905456 TCTTCTTCCTGTACTTTTCCTCCA 59.095 41.667 0.00 0.00 0.00 3.86
71 72 4.618920 TCTTCCTGTACTTTTCCTCCAC 57.381 45.455 0.00 0.00 0.00 4.02
72 73 3.971305 TCTTCCTGTACTTTTCCTCCACA 59.029 43.478 0.00 0.00 0.00 4.17
73 74 4.410883 TCTTCCTGTACTTTTCCTCCACAA 59.589 41.667 0.00 0.00 0.00 3.33
74 75 4.993705 TCCTGTACTTTTCCTCCACAAT 57.006 40.909 0.00 0.00 0.00 2.71
75 76 5.319043 TCCTGTACTTTTCCTCCACAATT 57.681 39.130 0.00 0.00 0.00 2.32
76 77 5.313712 TCCTGTACTTTTCCTCCACAATTC 58.686 41.667 0.00 0.00 0.00 2.17
77 78 4.459337 CCTGTACTTTTCCTCCACAATTCC 59.541 45.833 0.00 0.00 0.00 3.01
78 79 5.316987 CTGTACTTTTCCTCCACAATTCCT 58.683 41.667 0.00 0.00 0.00 3.36
79 80 5.701224 TGTACTTTTCCTCCACAATTCCTT 58.299 37.500 0.00 0.00 0.00 3.36
80 81 5.768164 TGTACTTTTCCTCCACAATTCCTTC 59.232 40.000 0.00 0.00 0.00 3.46
81 82 4.803452 ACTTTTCCTCCACAATTCCTTCA 58.197 39.130 0.00 0.00 0.00 3.02
82 83 5.208121 ACTTTTCCTCCACAATTCCTTCAA 58.792 37.500 0.00 0.00 0.00 2.69
83 84 5.660864 ACTTTTCCTCCACAATTCCTTCAAA 59.339 36.000 0.00 0.00 0.00 2.69
84 85 5.529581 TTTCCTCCACAATTCCTTCAAAC 57.470 39.130 0.00 0.00 0.00 2.93
85 86 3.496331 TCCTCCACAATTCCTTCAAACC 58.504 45.455 0.00 0.00 0.00 3.27
86 87 3.117322 TCCTCCACAATTCCTTCAAACCA 60.117 43.478 0.00 0.00 0.00 3.67
87 88 3.640967 CCTCCACAATTCCTTCAAACCAA 59.359 43.478 0.00 0.00 0.00 3.67
88 89 4.100808 CCTCCACAATTCCTTCAAACCAAA 59.899 41.667 0.00 0.00 0.00 3.28
89 90 5.017294 TCCACAATTCCTTCAAACCAAAC 57.983 39.130 0.00 0.00 0.00 2.93
90 91 3.801594 CCACAATTCCTTCAAACCAAACG 59.198 43.478 0.00 0.00 0.00 3.60
91 92 4.429108 CACAATTCCTTCAAACCAAACGT 58.571 39.130 0.00 0.00 0.00 3.99
92 93 5.450688 CCACAATTCCTTCAAACCAAACGTA 60.451 40.000 0.00 0.00 0.00 3.57
93 94 5.685511 CACAATTCCTTCAAACCAAACGTAG 59.314 40.000 0.00 0.00 0.00 3.51
94 95 3.974871 TTCCTTCAAACCAAACGTAGC 57.025 42.857 0.00 0.00 0.00 3.58
95 96 3.202829 TCCTTCAAACCAAACGTAGCT 57.797 42.857 0.00 0.00 0.00 3.32
96 97 3.547746 TCCTTCAAACCAAACGTAGCTT 58.452 40.909 0.00 0.00 0.00 3.74
97 98 4.706035 TCCTTCAAACCAAACGTAGCTTA 58.294 39.130 0.00 0.00 0.00 3.09
98 99 5.124645 TCCTTCAAACCAAACGTAGCTTAA 58.875 37.500 0.00 0.00 0.00 1.85
99 100 5.766174 TCCTTCAAACCAAACGTAGCTTAAT 59.234 36.000 0.00 0.00 0.00 1.40
100 101 6.263617 TCCTTCAAACCAAACGTAGCTTAATT 59.736 34.615 0.00 0.00 0.00 1.40
101 102 6.581166 CCTTCAAACCAAACGTAGCTTAATTC 59.419 38.462 0.00 0.00 0.00 2.17
102 103 6.870971 TCAAACCAAACGTAGCTTAATTCT 57.129 33.333 0.00 0.00 0.00 2.40
103 104 7.966246 TCAAACCAAACGTAGCTTAATTCTA 57.034 32.000 0.00 0.00 0.00 2.10
104 105 8.556213 TCAAACCAAACGTAGCTTAATTCTAT 57.444 30.769 0.00 0.00 0.00 1.98
105 106 9.656040 TCAAACCAAACGTAGCTTAATTCTATA 57.344 29.630 0.00 0.00 0.00 1.31
106 107 9.916397 CAAACCAAACGTAGCTTAATTCTATAG 57.084 33.333 0.00 0.00 0.00 1.31
107 108 8.658499 AACCAAACGTAGCTTAATTCTATAGG 57.342 34.615 0.00 0.00 0.00 2.57
108 109 8.015185 ACCAAACGTAGCTTAATTCTATAGGA 57.985 34.615 0.00 0.00 0.00 2.94
109 110 8.648693 ACCAAACGTAGCTTAATTCTATAGGAT 58.351 33.333 0.00 0.00 0.00 3.24
113 114 9.750783 AACGTAGCTTAATTCTATAGGATAGGA 57.249 33.333 0.00 0.00 0.00 2.94
114 115 9.924010 ACGTAGCTTAATTCTATAGGATAGGAT 57.076 33.333 0.00 0.00 0.00 3.24
162 163 9.851267 AGATCCTTCTAGTTTATAGGAATGGAT 57.149 33.333 0.00 0.00 40.02 3.41
165 166 9.676129 TCCTTCTAGTTTATAGGAATGGATTCT 57.324 33.333 0.00 0.00 37.00 2.40
179 180 8.614469 GGAATGGATTCTTATTCCTAAGTGAG 57.386 38.462 18.13 0.00 45.66 3.51
180 181 8.432805 GGAATGGATTCTTATTCCTAAGTGAGA 58.567 37.037 18.13 0.00 45.66 3.27
194 195 9.716556 TTCCTAAGTGAGATTAGTTTCTATCCT 57.283 33.333 0.00 0.00 31.94 3.24
195 196 9.357161 TCCTAAGTGAGATTAGTTTCTATCCTC 57.643 37.037 0.00 0.00 31.94 3.71
196 197 8.581578 CCTAAGTGAGATTAGTTTCTATCCTCC 58.418 40.741 0.00 0.00 31.94 4.30
197 198 7.979786 AAGTGAGATTAGTTTCTATCCTCCA 57.020 36.000 0.00 0.00 0.00 3.86
198 199 7.354751 AGTGAGATTAGTTTCTATCCTCCAC 57.645 40.000 0.00 0.00 0.00 4.02
199 200 6.897966 AGTGAGATTAGTTTCTATCCTCCACA 59.102 38.462 0.00 0.00 0.00 4.17
200 201 7.566879 AGTGAGATTAGTTTCTATCCTCCACAT 59.433 37.037 0.00 0.00 0.00 3.21
201 202 8.207545 GTGAGATTAGTTTCTATCCTCCACATT 58.792 37.037 0.00 0.00 0.00 2.71
202 203 8.772250 TGAGATTAGTTTCTATCCTCCACATTT 58.228 33.333 0.00 0.00 0.00 2.32
203 204 9.267084 GAGATTAGTTTCTATCCTCCACATTTC 57.733 37.037 0.00 0.00 0.00 2.17
204 205 8.772250 AGATTAGTTTCTATCCTCCACATTTCA 58.228 33.333 0.00 0.00 0.00 2.69
205 206 9.396022 GATTAGTTTCTATCCTCCACATTTCAA 57.604 33.333 0.00 0.00 0.00 2.69
206 207 9.753674 ATTAGTTTCTATCCTCCACATTTCAAA 57.246 29.630 0.00 0.00 0.00 2.69
207 208 9.581289 TTAGTTTCTATCCTCCACATTTCAAAA 57.419 29.630 0.00 0.00 0.00 2.44
208 209 8.477419 AGTTTCTATCCTCCACATTTCAAAAA 57.523 30.769 0.00 0.00 0.00 1.94
260 261 5.523438 TTTTATGGTGTGAACCAAAGGAC 57.477 39.130 0.99 0.00 43.83 3.85
261 262 4.447138 TTATGGTGTGAACCAAAGGACT 57.553 40.909 0.99 0.00 43.83 3.85
262 263 2.818751 TGGTGTGAACCAAAGGACTT 57.181 45.000 0.00 0.00 36.74 3.01
263 264 2.650322 TGGTGTGAACCAAAGGACTTC 58.350 47.619 0.00 0.00 36.74 3.01
264 265 2.241176 TGGTGTGAACCAAAGGACTTCT 59.759 45.455 0.00 0.00 36.74 2.85
265 266 2.879026 GGTGTGAACCAAAGGACTTCTC 59.121 50.000 0.00 0.00 0.00 2.87
266 267 3.433740 GGTGTGAACCAAAGGACTTCTCT 60.434 47.826 0.00 0.00 0.00 3.10
267 268 4.200092 GTGTGAACCAAAGGACTTCTCTT 58.800 43.478 0.00 0.00 0.00 2.85
268 269 4.640647 GTGTGAACCAAAGGACTTCTCTTT 59.359 41.667 0.00 0.00 35.09 2.52
269 270 5.125578 GTGTGAACCAAAGGACTTCTCTTTT 59.874 40.000 0.00 0.00 32.72 2.27
270 271 5.714806 TGTGAACCAAAGGACTTCTCTTTTT 59.285 36.000 0.00 0.00 32.72 1.94
290 291 3.275617 TTTTATGTATGTGGCTCGGCT 57.724 42.857 0.00 0.00 0.00 5.52
291 292 3.275617 TTTATGTATGTGGCTCGGCTT 57.724 42.857 0.00 0.00 0.00 4.35
292 293 2.238942 TATGTATGTGGCTCGGCTTG 57.761 50.000 0.00 0.00 0.00 4.01
293 294 0.464373 ATGTATGTGGCTCGGCTTGG 60.464 55.000 0.00 0.00 0.00 3.61
294 295 1.819632 GTATGTGGCTCGGCTTGGG 60.820 63.158 0.00 0.00 0.00 4.12
295 296 3.697439 TATGTGGCTCGGCTTGGGC 62.697 63.158 0.00 0.00 37.82 5.36
298 299 4.722700 TGGCTCGGCTTGGGCTTC 62.723 66.667 1.50 0.00 38.73 3.86
305 306 2.991540 GCTTGGGCTTCCGGCTTT 60.992 61.111 0.00 0.00 41.46 3.51
306 307 2.574018 GCTTGGGCTTCCGGCTTTT 61.574 57.895 0.00 0.00 41.46 2.27
307 308 1.290009 CTTGGGCTTCCGGCTTTTG 59.710 57.895 0.00 0.00 41.46 2.44
308 309 1.152652 TTGGGCTTCCGGCTTTTGA 60.153 52.632 0.00 0.00 41.46 2.69
309 310 0.541764 TTGGGCTTCCGGCTTTTGAT 60.542 50.000 0.00 0.00 41.46 2.57
310 311 1.250154 TGGGCTTCCGGCTTTTGATG 61.250 55.000 0.00 0.00 41.46 3.07
311 312 1.250840 GGGCTTCCGGCTTTTGATGT 61.251 55.000 0.00 0.00 41.46 3.06
312 313 0.603065 GGCTTCCGGCTTTTGATGTT 59.397 50.000 0.00 0.00 41.46 2.71
313 314 1.669795 GGCTTCCGGCTTTTGATGTTG 60.670 52.381 0.00 0.00 41.46 3.33
314 315 1.669795 GCTTCCGGCTTTTGATGTTGG 60.670 52.381 0.00 0.00 38.06 3.77
315 316 0.965439 TTCCGGCTTTTGATGTTGGG 59.035 50.000 0.00 0.00 0.00 4.12
316 317 1.079888 CCGGCTTTTGATGTTGGGC 60.080 57.895 0.00 0.00 0.00 5.36
317 318 1.535204 CCGGCTTTTGATGTTGGGCT 61.535 55.000 0.00 0.00 0.00 5.19
318 319 0.318120 CGGCTTTTGATGTTGGGCTT 59.682 50.000 0.00 0.00 0.00 4.35
319 320 1.543802 CGGCTTTTGATGTTGGGCTTA 59.456 47.619 0.00 0.00 0.00 3.09
320 321 2.415893 CGGCTTTTGATGTTGGGCTTAG 60.416 50.000 0.00 0.00 0.00 2.18
321 322 2.094026 GGCTTTTGATGTTGGGCTTAGG 60.094 50.000 0.00 0.00 0.00 2.69
322 323 2.562738 GCTTTTGATGTTGGGCTTAGGT 59.437 45.455 0.00 0.00 0.00 3.08
323 324 3.614870 GCTTTTGATGTTGGGCTTAGGTG 60.615 47.826 0.00 0.00 0.00 4.00
324 325 3.517296 TTTGATGTTGGGCTTAGGTGA 57.483 42.857 0.00 0.00 0.00 4.02
325 326 2.787473 TGATGTTGGGCTTAGGTGAG 57.213 50.000 0.00 0.00 0.00 3.51
326 327 1.985159 TGATGTTGGGCTTAGGTGAGT 59.015 47.619 0.00 0.00 0.00 3.41
327 328 2.290260 TGATGTTGGGCTTAGGTGAGTG 60.290 50.000 0.00 0.00 0.00 3.51
328 329 0.400213 TGTTGGGCTTAGGTGAGTGG 59.600 55.000 0.00 0.00 0.00 4.00
329 330 0.400594 GTTGGGCTTAGGTGAGTGGT 59.599 55.000 0.00 0.00 0.00 4.16
330 331 0.690762 TTGGGCTTAGGTGAGTGGTC 59.309 55.000 0.00 0.00 0.00 4.02
331 332 0.178903 TGGGCTTAGGTGAGTGGTCT 60.179 55.000 0.00 0.00 0.00 3.85
332 333 0.250513 GGGCTTAGGTGAGTGGTCTG 59.749 60.000 0.00 0.00 0.00 3.51
333 334 0.250513 GGCTTAGGTGAGTGGTCTGG 59.749 60.000 0.00 0.00 0.00 3.86
334 335 0.250513 GCTTAGGTGAGTGGTCTGGG 59.749 60.000 0.00 0.00 0.00 4.45
335 336 1.645710 CTTAGGTGAGTGGTCTGGGT 58.354 55.000 0.00 0.00 0.00 4.51
336 337 2.816411 CTTAGGTGAGTGGTCTGGGTA 58.184 52.381 0.00 0.00 0.00 3.69
337 338 2.526888 TAGGTGAGTGGTCTGGGTAG 57.473 55.000 0.00 0.00 0.00 3.18
338 339 0.487772 AGGTGAGTGGTCTGGGTAGT 59.512 55.000 0.00 0.00 0.00 2.73
339 340 0.608640 GGTGAGTGGTCTGGGTAGTG 59.391 60.000 0.00 0.00 0.00 2.74
340 341 0.608640 GTGAGTGGTCTGGGTAGTGG 59.391 60.000 0.00 0.00 0.00 4.00
341 342 1.192146 TGAGTGGTCTGGGTAGTGGC 61.192 60.000 0.00 0.00 0.00 5.01
342 343 0.905337 GAGTGGTCTGGGTAGTGGCT 60.905 60.000 0.00 0.00 0.00 4.75
343 344 0.905337 AGTGGTCTGGGTAGTGGCTC 60.905 60.000 0.00 0.00 0.00 4.70
344 345 1.157513 TGGTCTGGGTAGTGGCTCA 59.842 57.895 0.00 0.00 0.00 4.26
345 346 0.904865 TGGTCTGGGTAGTGGCTCAG 60.905 60.000 0.00 0.00 38.28 3.35
346 347 1.219393 GTCTGGGTAGTGGCTCAGC 59.781 63.158 0.00 0.00 36.92 4.26
347 348 1.079256 TCTGGGTAGTGGCTCAGCT 59.921 57.895 0.00 0.00 36.92 4.24
348 349 0.335019 TCTGGGTAGTGGCTCAGCTA 59.665 55.000 0.00 0.00 36.92 3.32
349 350 0.749649 CTGGGTAGTGGCTCAGCTAG 59.250 60.000 0.00 0.00 29.39 3.42
359 360 2.290847 CTCAGCTAGCACCCCTTCA 58.709 57.895 18.83 0.00 0.00 3.02
360 361 0.835941 CTCAGCTAGCACCCCTTCAT 59.164 55.000 18.83 0.00 0.00 2.57
361 362 0.833287 TCAGCTAGCACCCCTTCATC 59.167 55.000 18.83 0.00 0.00 2.92
362 363 0.543277 CAGCTAGCACCCCTTCATCA 59.457 55.000 18.83 0.00 0.00 3.07
363 364 1.142465 CAGCTAGCACCCCTTCATCAT 59.858 52.381 18.83 0.00 0.00 2.45
364 365 1.849039 AGCTAGCACCCCTTCATCATT 59.151 47.619 18.83 0.00 0.00 2.57
365 366 2.243221 AGCTAGCACCCCTTCATCATTT 59.757 45.455 18.83 0.00 0.00 2.32
366 367 3.026694 GCTAGCACCCCTTCATCATTTT 58.973 45.455 10.63 0.00 0.00 1.82
367 368 3.181483 GCTAGCACCCCTTCATCATTTTG 60.181 47.826 10.63 0.00 0.00 2.44
368 369 3.173953 AGCACCCCTTCATCATTTTGA 57.826 42.857 0.00 0.00 0.00 2.69
369 370 3.716431 AGCACCCCTTCATCATTTTGAT 58.284 40.909 0.00 0.00 37.65 2.57
384 385 8.843262 CATCATTTTGATGTTAGGCTTAGATGA 58.157 33.333 8.92 0.00 46.80 2.92
385 386 8.442632 TCATTTTGATGTTAGGCTTAGATGAG 57.557 34.615 0.00 0.00 0.00 2.90
386 387 8.049117 TCATTTTGATGTTAGGCTTAGATGAGT 58.951 33.333 0.00 0.00 0.00 3.41
387 388 7.615582 TTTTGATGTTAGGCTTAGATGAGTG 57.384 36.000 0.00 0.00 0.00 3.51
388 389 5.282055 TGATGTTAGGCTTAGATGAGTGG 57.718 43.478 0.00 0.00 0.00 4.00
389 390 4.716784 TGATGTTAGGCTTAGATGAGTGGT 59.283 41.667 0.00 0.00 0.00 4.16
390 391 4.737855 TGTTAGGCTTAGATGAGTGGTC 57.262 45.455 0.00 0.00 0.00 4.02
391 392 4.353777 TGTTAGGCTTAGATGAGTGGTCT 58.646 43.478 0.00 0.00 0.00 3.85
392 393 4.160439 TGTTAGGCTTAGATGAGTGGTCTG 59.840 45.833 0.00 0.00 0.00 3.51
393 394 2.114616 AGGCTTAGATGAGTGGTCTGG 58.885 52.381 0.00 0.00 0.00 3.86
394 395 1.139853 GGCTTAGATGAGTGGTCTGGG 59.860 57.143 0.00 0.00 0.00 4.45
395 396 1.834263 GCTTAGATGAGTGGTCTGGGT 59.166 52.381 0.00 0.00 0.00 4.51
396 397 3.031736 GCTTAGATGAGTGGTCTGGGTA 58.968 50.000 0.00 0.00 0.00 3.69
397 398 3.068873 GCTTAGATGAGTGGTCTGGGTAG 59.931 52.174 0.00 0.00 0.00 3.18
398 399 2.930109 AGATGAGTGGTCTGGGTAGT 57.070 50.000 0.00 0.00 0.00 2.73
399 400 2.461695 AGATGAGTGGTCTGGGTAGTG 58.538 52.381 0.00 0.00 0.00 2.74
400 401 1.482593 GATGAGTGGTCTGGGTAGTGG 59.517 57.143 0.00 0.00 0.00 4.00
401 402 1.192146 TGAGTGGTCTGGGTAGTGGC 61.192 60.000 0.00 0.00 0.00 5.01
402 403 1.900545 GAGTGGTCTGGGTAGTGGCC 61.901 65.000 0.00 0.00 0.00 5.36
403 404 1.918800 GTGGTCTGGGTAGTGGCCT 60.919 63.158 3.32 0.00 0.00 5.19
404 405 0.616679 GTGGTCTGGGTAGTGGCCTA 60.617 60.000 3.32 0.00 0.00 3.93
405 406 0.325296 TGGTCTGGGTAGTGGCCTAG 60.325 60.000 3.32 0.00 38.32 3.02
406 407 1.687297 GGTCTGGGTAGTGGCCTAGC 61.687 65.000 3.32 0.00 40.26 3.42
407 408 0.688087 GTCTGGGTAGTGGCCTAGCT 60.688 60.000 3.32 1.96 40.70 3.32
408 409 0.931468 TCTGGGTAGTGGCCTAGCTA 59.069 55.000 3.32 0.87 40.70 3.32
409 410 1.289830 TCTGGGTAGTGGCCTAGCTAA 59.710 52.381 3.32 0.00 40.70 3.09
410 411 1.413077 CTGGGTAGTGGCCTAGCTAAC 59.587 57.143 3.32 6.68 40.70 2.34
411 412 1.273381 TGGGTAGTGGCCTAGCTAACA 60.273 52.381 3.32 4.53 40.70 2.41
412 413 1.138464 GGGTAGTGGCCTAGCTAACAC 59.862 57.143 3.32 12.52 40.70 3.32
413 414 1.202382 GGTAGTGGCCTAGCTAACACG 60.202 57.143 3.32 0.00 38.39 4.49
414 415 0.458669 TAGTGGCCTAGCTAACACGC 59.541 55.000 3.32 5.57 38.78 5.34
415 416 1.814169 GTGGCCTAGCTAACACGCC 60.814 63.158 3.32 11.89 40.16 5.68
416 417 1.987855 TGGCCTAGCTAACACGCCT 60.988 57.895 17.11 0.00 40.40 5.52
417 418 1.221021 GGCCTAGCTAACACGCCTT 59.779 57.895 11.63 0.00 36.65 4.35
418 419 0.810426 GGCCTAGCTAACACGCCTTC 60.810 60.000 11.63 0.00 36.65 3.46
419 420 0.108329 GCCTAGCTAACACGCCTTCA 60.108 55.000 0.00 0.00 0.00 3.02
420 421 1.473434 GCCTAGCTAACACGCCTTCAT 60.473 52.381 0.00 0.00 0.00 2.57
421 422 2.474816 CCTAGCTAACACGCCTTCATC 58.525 52.381 0.00 0.00 0.00 2.92
422 423 2.159099 CCTAGCTAACACGCCTTCATCA 60.159 50.000 0.00 0.00 0.00 3.07
423 424 2.698855 AGCTAACACGCCTTCATCAT 57.301 45.000 0.00 0.00 0.00 2.45
424 425 2.991250 AGCTAACACGCCTTCATCATT 58.009 42.857 0.00 0.00 0.00 2.57
425 426 3.347216 AGCTAACACGCCTTCATCATTT 58.653 40.909 0.00 0.00 0.00 2.32
426 427 3.127548 AGCTAACACGCCTTCATCATTTG 59.872 43.478 0.00 0.00 0.00 2.32
427 428 3.126858 GCTAACACGCCTTCATCATTTGA 59.873 43.478 0.00 0.00 0.00 2.69
428 429 4.379394 GCTAACACGCCTTCATCATTTGAA 60.379 41.667 0.00 0.00 42.09 2.69
429 430 4.789012 AACACGCCTTCATCATTTGAAT 57.211 36.364 0.00 0.00 43.30 2.57
430 431 5.895636 AACACGCCTTCATCATTTGAATA 57.104 34.783 0.00 0.00 43.30 1.75
431 432 5.490139 ACACGCCTTCATCATTTGAATAG 57.510 39.130 0.00 0.00 43.30 1.73
432 433 5.185454 ACACGCCTTCATCATTTGAATAGA 58.815 37.500 0.00 0.00 43.30 1.98
433 434 5.647658 ACACGCCTTCATCATTTGAATAGAA 59.352 36.000 0.00 0.00 43.30 2.10
434 435 6.183360 ACACGCCTTCATCATTTGAATAGAAG 60.183 38.462 11.02 11.02 43.30 2.85
435 436 5.882557 ACGCCTTCATCATTTGAATAGAAGT 59.117 36.000 14.31 2.04 43.30 3.01
436 437 7.011389 CACGCCTTCATCATTTGAATAGAAGTA 59.989 37.037 14.31 0.00 43.30 2.24
437 438 7.225538 ACGCCTTCATCATTTGAATAGAAGTAG 59.774 37.037 14.31 11.46 43.30 2.57
438 439 7.358830 GCCTTCATCATTTGAATAGAAGTAGC 58.641 38.462 14.31 10.28 43.30 3.58
439 440 7.571026 CCTTCATCATTTGAATAGAAGTAGCG 58.429 38.462 14.31 0.00 43.30 4.26
440 441 7.307632 CCTTCATCATTTGAATAGAAGTAGCGG 60.308 40.741 14.31 3.09 43.30 5.52
441 442 5.466728 TCATCATTTGAATAGAAGTAGCGGC 59.533 40.000 0.00 0.00 0.00 6.53
442 443 4.765273 TCATTTGAATAGAAGTAGCGGCA 58.235 39.130 1.45 0.00 0.00 5.69
443 444 5.182487 TCATTTGAATAGAAGTAGCGGCAA 58.818 37.500 1.45 0.00 0.00 4.52
444 445 5.645929 TCATTTGAATAGAAGTAGCGGCAAA 59.354 36.000 1.45 0.00 0.00 3.68
445 446 6.318648 TCATTTGAATAGAAGTAGCGGCAAAT 59.681 34.615 1.45 0.00 35.73 2.32
446 447 5.484173 TTGAATAGAAGTAGCGGCAAATG 57.516 39.130 1.45 0.00 0.00 2.32
447 448 4.513442 TGAATAGAAGTAGCGGCAAATGT 58.487 39.130 1.45 0.00 0.00 2.71
448 449 4.941263 TGAATAGAAGTAGCGGCAAATGTT 59.059 37.500 1.45 0.00 0.00 2.71
449 450 4.882671 ATAGAAGTAGCGGCAAATGTTG 57.117 40.909 1.45 0.00 0.00 3.33
468 469 2.711711 CCAAGATGGCGGATTCAGG 58.288 57.895 0.00 0.00 0.00 3.86
469 470 1.450531 CCAAGATGGCGGATTCAGGC 61.451 60.000 3.39 3.39 0.00 4.85
475 476 1.608055 TGGCGGATTCAGGCATATTG 58.392 50.000 8.92 0.00 39.30 1.90
476 477 1.133823 TGGCGGATTCAGGCATATTGT 60.134 47.619 8.92 0.00 39.30 2.71
477 478 1.956477 GGCGGATTCAGGCATATTGTT 59.044 47.619 5.51 0.00 0.00 2.83
478 479 2.287788 GGCGGATTCAGGCATATTGTTG 60.288 50.000 5.51 0.00 0.00 3.33
479 480 2.358898 GCGGATTCAGGCATATTGTTGT 59.641 45.455 0.00 0.00 0.00 3.32
480 481 3.563808 GCGGATTCAGGCATATTGTTGTA 59.436 43.478 0.00 0.00 0.00 2.41
481 482 4.036262 GCGGATTCAGGCATATTGTTGTAA 59.964 41.667 0.00 0.00 0.00 2.41
482 483 5.278463 GCGGATTCAGGCATATTGTTGTAAT 60.278 40.000 0.00 0.00 0.00 1.89
483 484 6.072728 GCGGATTCAGGCATATTGTTGTAATA 60.073 38.462 0.00 0.00 0.00 0.98
484 485 7.298122 CGGATTCAGGCATATTGTTGTAATAC 58.702 38.462 0.00 0.00 0.00 1.89
485 486 7.173218 CGGATTCAGGCATATTGTTGTAATACT 59.827 37.037 0.00 0.00 0.00 2.12
486 487 8.850156 GGATTCAGGCATATTGTTGTAATACTT 58.150 33.333 0.00 0.00 0.00 2.24
489 490 8.574251 TCAGGCATATTGTTGTAATACTTTGT 57.426 30.769 0.00 0.00 0.00 2.83
490 491 9.674068 TCAGGCATATTGTTGTAATACTTTGTA 57.326 29.630 0.00 0.00 0.00 2.41
493 494 9.730420 GGCATATTGTTGTAATACTTTGTAAGG 57.270 33.333 0.00 0.00 0.00 2.69
498 499 8.611654 TTGTTGTAATACTTTGTAAGGTCCTC 57.388 34.615 0.00 0.00 0.00 3.71
499 500 6.869913 TGTTGTAATACTTTGTAAGGTCCTCG 59.130 38.462 0.00 0.00 0.00 4.63
500 501 6.839124 TGTAATACTTTGTAAGGTCCTCGA 57.161 37.500 0.00 0.00 0.00 4.04
501 502 6.860080 TGTAATACTTTGTAAGGTCCTCGAG 58.140 40.000 5.13 5.13 0.00 4.04
502 503 6.660521 TGTAATACTTTGTAAGGTCCTCGAGA 59.339 38.462 15.71 0.00 0.00 4.04
503 504 6.600882 AATACTTTGTAAGGTCCTCGAGAA 57.399 37.500 15.71 0.00 0.00 2.87
504 505 6.793505 ATACTTTGTAAGGTCCTCGAGAAT 57.206 37.500 15.71 0.00 0.00 2.40
505 506 7.893124 ATACTTTGTAAGGTCCTCGAGAATA 57.107 36.000 15.71 0.00 0.00 1.75
506 507 6.600882 ACTTTGTAAGGTCCTCGAGAATAA 57.399 37.500 15.71 0.00 0.00 1.40
507 508 7.184067 ACTTTGTAAGGTCCTCGAGAATAAT 57.816 36.000 15.71 0.00 0.00 1.28
508 509 7.266400 ACTTTGTAAGGTCCTCGAGAATAATC 58.734 38.462 15.71 0.00 0.00 1.75
509 510 6.785337 TTGTAAGGTCCTCGAGAATAATCA 57.215 37.500 15.71 2.16 0.00 2.57
510 511 6.785337 TGTAAGGTCCTCGAGAATAATCAA 57.215 37.500 15.71 0.00 0.00 2.57
511 512 7.361457 TGTAAGGTCCTCGAGAATAATCAAT 57.639 36.000 15.71 0.00 0.00 2.57
512 513 8.473358 TGTAAGGTCCTCGAGAATAATCAATA 57.527 34.615 15.71 0.00 0.00 1.90
513 514 8.920174 TGTAAGGTCCTCGAGAATAATCAATAA 58.080 33.333 15.71 0.00 0.00 1.40
514 515 9.760077 GTAAGGTCCTCGAGAATAATCAATAAA 57.240 33.333 15.71 0.00 0.00 1.40
515 516 8.894768 AAGGTCCTCGAGAATAATCAATAAAG 57.105 34.615 15.71 0.00 0.00 1.85
516 517 8.024145 AGGTCCTCGAGAATAATCAATAAAGT 57.976 34.615 15.71 0.00 0.00 2.66
517 518 7.928706 AGGTCCTCGAGAATAATCAATAAAGTG 59.071 37.037 15.71 0.00 0.00 3.16
518 519 7.171678 GGTCCTCGAGAATAATCAATAAAGTGG 59.828 40.741 15.71 0.00 0.00 4.00
519 520 6.706270 TCCTCGAGAATAATCAATAAAGTGGC 59.294 38.462 15.71 0.00 0.00 5.01
520 521 6.073003 CCTCGAGAATAATCAATAAAGTGGCC 60.073 42.308 15.71 0.00 0.00 5.36
521 522 5.465390 TCGAGAATAATCAATAAAGTGGCCG 59.535 40.000 0.00 0.00 0.00 6.13
522 523 5.438761 AGAATAATCAATAAAGTGGCCGC 57.561 39.130 8.71 8.71 0.00 6.53
523 524 4.887071 AGAATAATCAATAAAGTGGCCGCA 59.113 37.500 20.59 0.00 0.00 5.69
524 525 5.536161 AGAATAATCAATAAAGTGGCCGCAT 59.464 36.000 20.59 2.72 0.00 4.73
525 526 3.441496 AATCAATAAAGTGGCCGCATG 57.559 42.857 20.59 9.18 0.00 4.06
526 527 0.455410 TCAATAAAGTGGCCGCATGC 59.545 50.000 20.59 7.91 40.16 4.06
527 528 0.173029 CAATAAAGTGGCCGCATGCA 59.827 50.000 20.59 0.22 43.89 3.96
528 529 1.113788 AATAAAGTGGCCGCATGCAT 58.886 45.000 20.59 0.00 43.89 3.96
529 530 0.670162 ATAAAGTGGCCGCATGCATC 59.330 50.000 20.59 8.10 43.89 3.91
530 531 0.394216 TAAAGTGGCCGCATGCATCT 60.394 50.000 20.59 4.97 43.89 2.90
531 532 1.660560 AAAGTGGCCGCATGCATCTC 61.661 55.000 20.59 7.13 43.89 2.75
532 533 3.589881 GTGGCCGCATGCATCTCC 61.590 66.667 19.57 12.47 43.89 3.71
533 534 4.881440 TGGCCGCATGCATCTCCC 62.881 66.667 19.57 10.01 43.89 4.30
534 535 4.881440 GGCCGCATGCATCTCCCA 62.881 66.667 19.57 0.00 43.89 4.37
535 536 3.285215 GCCGCATGCATCTCCCAG 61.285 66.667 19.57 0.00 40.77 4.45
536 537 2.507452 CCGCATGCATCTCCCAGA 59.493 61.111 19.57 0.00 0.00 3.86
537 538 1.072678 CCGCATGCATCTCCCAGAT 59.927 57.895 19.57 0.00 34.74 2.90
545 546 0.250381 CATCTCCCAGATGCAGAGGC 60.250 60.000 0.61 0.00 44.69 4.70
546 547 1.417288 ATCTCCCAGATGCAGAGGCC 61.417 60.000 0.00 0.00 40.13 5.19
547 548 3.457625 CTCCCAGATGCAGAGGCCG 62.458 68.421 0.00 0.00 40.13 6.13
548 549 4.559063 CCCAGATGCAGAGGCCGG 62.559 72.222 0.00 0.00 40.13 6.13
549 550 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
550 551 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
556 557 3.866582 CAGAGGCCGGGGGTCATC 61.867 72.222 2.18 0.00 0.00 2.92
569 570 4.586306 GGGGTCATCCTCCTTTTCTAAA 57.414 45.455 0.00 0.00 35.33 1.85
570 571 4.930696 GGGGTCATCCTCCTTTTCTAAAA 58.069 43.478 0.00 0.00 35.33 1.52
571 572 5.330233 GGGGTCATCCTCCTTTTCTAAAAA 58.670 41.667 0.00 0.00 35.33 1.94
691 692 3.699038 AGAAGATCTCCCTCTTGTTCTCG 59.301 47.826 0.00 0.00 35.63 4.04
721 722 5.072040 ACGTTGGATCAAATCAAAATCCC 57.928 39.130 0.00 0.00 38.56 3.85
727 728 4.440112 GGATCAAATCAAAATCCCACCGTC 60.440 45.833 0.00 0.00 34.14 4.79
773 775 3.535561 CATCTGGACCGTTGCTTATCTT 58.464 45.455 0.00 0.00 0.00 2.40
779 781 4.080807 TGGACCGTTGCTTATCTTAATCCA 60.081 41.667 0.00 0.00 0.00 3.41
789 791 5.743422 GCTTATCTTAATCCAGGACTGTCCC 60.743 48.000 22.81 5.74 37.19 4.46
843 849 1.557099 CCCTGACAGTGTGCCTAGTA 58.443 55.000 0.00 0.00 0.00 1.82
844 850 1.478510 CCCTGACAGTGTGCCTAGTAG 59.521 57.143 0.00 0.00 0.00 2.57
845 851 2.171840 CCTGACAGTGTGCCTAGTAGT 58.828 52.381 0.00 0.00 0.00 2.73
851 857 2.099921 CAGTGTGCCTAGTAGTGCCTAG 59.900 54.545 7.81 0.00 35.26 3.02
888 894 7.584122 AGAGAAAAAGACAGTGTCACTACTA 57.416 36.000 24.73 0.00 34.60 1.82
890 896 7.285858 AGAGAAAAAGACAGTGTCACTACTACT 59.714 37.037 24.73 13.78 34.60 2.57
944 959 3.649277 CTCCGACACCGAGCTTGGG 62.649 68.421 24.40 14.90 38.22 4.12
945 960 4.003788 CCGACACCGAGCTTGGGT 62.004 66.667 24.40 17.94 38.65 4.51
1245 1300 2.436109 GGCCAGCAGAAGACCCAA 59.564 61.111 0.00 0.00 0.00 4.12
1246 1301 1.676967 GGCCAGCAGAAGACCCAAG 60.677 63.158 0.00 0.00 0.00 3.61
1247 1302 2.338785 GCCAGCAGAAGACCCAAGC 61.339 63.158 0.00 0.00 0.00 4.01
1248 1303 1.676967 CCAGCAGAAGACCCAAGCC 60.677 63.158 0.00 0.00 0.00 4.35
1249 1304 2.037136 CAGCAGAAGACCCAAGCCG 61.037 63.158 0.00 0.00 0.00 5.52
1250 1305 2.747855 GCAGAAGACCCAAGCCGG 60.748 66.667 0.00 0.00 0.00 6.13
1251 1306 2.750350 CAGAAGACCCAAGCCGGT 59.250 61.111 1.90 0.00 39.49 5.28
1552 1610 2.125512 ATGAGCGACGGCAAGACC 60.126 61.111 0.00 0.00 43.41 3.85
1617 1683 1.444553 GCTCTCGAGTTCACCGTGG 60.445 63.158 13.13 0.00 0.00 4.94
1816 1924 3.072468 CCGGAGTACAAGGGCCGA 61.072 66.667 0.00 0.00 46.29 5.54
1926 2034 1.916181 CCTCAAAGGGGTCATGGTACT 59.084 52.381 0.00 0.00 0.00 2.73
1964 2072 9.196552 TCTAGCTTACACATTAATGAATCATCG 57.803 33.333 22.16 5.29 0.00 3.84
1975 2083 7.848223 TTAATGAATCATCGTCATCAGTTGT 57.152 32.000 0.00 0.00 34.60 3.32
1976 2084 5.729974 ATGAATCATCGTCATCAGTTGTG 57.270 39.130 0.00 0.00 29.51 3.33
1977 2085 4.568956 TGAATCATCGTCATCAGTTGTGT 58.431 39.130 0.00 0.00 0.00 3.72
1978 2086 4.389687 TGAATCATCGTCATCAGTTGTGTG 59.610 41.667 0.00 0.00 0.00 3.82
1980 2088 3.059166 TCATCGTCATCAGTTGTGTGTG 58.941 45.455 0.00 0.00 0.00 3.82
1982 2090 0.936600 CGTCATCAGTTGTGTGTGCA 59.063 50.000 0.00 0.00 0.00 4.57
2001 2109 0.881600 ATGCATGCTAAGCGATGCGA 60.882 50.000 20.33 0.00 41.88 5.10
2232 2405 0.524816 ACTACAACATCTACGCGCCG 60.525 55.000 5.73 0.00 0.00 6.46
2285 2458 1.113517 ATCACCCCCTCGGTATGTCG 61.114 60.000 0.00 0.00 46.14 4.35
2361 2534 2.294233 ACCATGCATGCACGAAATATCC 59.706 45.455 25.37 0.00 0.00 2.59
2362 2535 2.293955 CCATGCATGCACGAAATATCCA 59.706 45.455 25.37 0.00 0.00 3.41
2364 2537 3.629438 TGCATGCACGAAATATCCATG 57.371 42.857 18.46 0.00 37.07 3.66
2365 2538 2.950975 TGCATGCACGAAATATCCATGT 59.049 40.909 18.46 0.00 36.54 3.21
2366 2539 4.133078 TGCATGCACGAAATATCCATGTA 58.867 39.130 18.46 0.00 36.54 2.29
2420 2594 7.493367 AGTCTTTCTAGAGATTTCAATACGGG 58.507 38.462 0.00 0.00 0.00 5.28
2429 2603 6.041637 AGAGATTTCAATACGGGCTACATACA 59.958 38.462 0.00 0.00 0.00 2.29
2443 2617 7.282450 CGGGCTACATACAGATGTATATAGACA 59.718 40.741 20.40 2.07 44.12 3.41
2564 2738 2.661675 CCACTACTTCGTGATTCGTGTG 59.338 50.000 0.00 0.00 40.80 3.82
2582 2756 4.629634 CGTGTGATGTTTTATAGCCAGTGA 59.370 41.667 0.00 0.00 0.00 3.41
2623 2797 8.642908 TTCATAGTATTACGTCATGTTTCAGG 57.357 34.615 0.00 0.00 0.00 3.86
2626 2800 1.816074 TTACGTCATGTTTCAGGGGC 58.184 50.000 0.00 0.00 0.00 5.80
2628 2802 0.889186 ACGTCATGTTTCAGGGGCAC 60.889 55.000 0.00 0.00 0.00 5.01
3054 3486 5.106442 TCATGCGTAGTACATTAACCACTG 58.894 41.667 0.38 0.00 0.00 3.66
3153 3585 3.446161 TGAGTGGATTTACGTCGATTCCT 59.554 43.478 0.00 0.00 0.00 3.36
3154 3586 4.641541 TGAGTGGATTTACGTCGATTCCTA 59.358 41.667 0.00 0.00 0.00 2.94
3155 3587 4.929781 AGTGGATTTACGTCGATTCCTAC 58.070 43.478 0.00 0.38 0.00 3.18
3156 3588 4.400251 AGTGGATTTACGTCGATTCCTACA 59.600 41.667 0.00 0.00 0.00 2.74
3157 3589 5.104374 GTGGATTTACGTCGATTCCTACAA 58.896 41.667 0.00 0.00 0.00 2.41
3158 3590 5.005107 GTGGATTTACGTCGATTCCTACAAC 59.995 44.000 0.00 0.00 0.00 3.32
3159 3591 5.104374 GGATTTACGTCGATTCCTACAACA 58.896 41.667 0.00 0.00 0.00 3.33
3160 3592 5.577945 GGATTTACGTCGATTCCTACAACAA 59.422 40.000 0.00 0.00 0.00 2.83
3161 3593 6.091169 GGATTTACGTCGATTCCTACAACAAA 59.909 38.462 0.00 0.00 0.00 2.83
3162 3594 6.841443 TTTACGTCGATTCCTACAACAAAA 57.159 33.333 0.00 0.00 0.00 2.44
3163 3595 7.424227 TTTACGTCGATTCCTACAACAAAAT 57.576 32.000 0.00 0.00 0.00 1.82
3164 3596 5.277601 ACGTCGATTCCTACAACAAAATG 57.722 39.130 0.00 0.00 0.00 2.32
3165 3597 4.753107 ACGTCGATTCCTACAACAAAATGT 59.247 37.500 0.00 0.00 37.32 2.71
3166 3598 5.079406 CGTCGATTCCTACAACAAAATGTG 58.921 41.667 0.00 0.00 34.75 3.21
3167 3599 5.333798 CGTCGATTCCTACAACAAAATGTGT 60.334 40.000 0.00 0.00 44.64 3.72
3257 3940 3.259876 TGTACTTTACGTGCCTCCAGATT 59.740 43.478 0.00 0.00 0.00 2.40
3351 4034 2.280524 CAAACGTCACCCGCCTCA 60.281 61.111 0.00 0.00 41.42 3.86
3421 4116 8.697846 TCTATGGTGTTATTTTAGAAGTGTCG 57.302 34.615 0.00 0.00 0.00 4.35
3435 4130 9.811995 TTTAGAAGTGTCGTGTATTTAGCATAT 57.188 29.630 0.00 0.00 0.00 1.78
3446 4141 7.011016 CGTGTATTTAGCATATTGAGGTGAACA 59.989 37.037 0.00 0.00 0.00 3.18
3456 4151 7.540055 GCATATTGAGGTGAACAAAAGAGAAAG 59.460 37.037 0.00 0.00 0.00 2.62
3481 4197 7.970614 AGCTAAAAACAAAGTTTGTCTTCTCAG 59.029 33.333 21.10 12.42 44.59 3.35
3502 4243 7.991460 TCTCAGCAACAATATCTCTCATCAAAT 59.009 33.333 0.00 0.00 0.00 2.32
3503 4244 9.269453 CTCAGCAACAATATCTCTCATCAAATA 57.731 33.333 0.00 0.00 0.00 1.40
3504 4245 9.788889 TCAGCAACAATATCTCTCATCAAATAT 57.211 29.630 0.00 0.00 0.00 1.28
3562 4303 9.726438 AGAAAATAATCCATTATACTCCCTTCG 57.274 33.333 0.00 0.00 32.91 3.79
3563 4304 9.503399 GAAAATAATCCATTATACTCCCTTCGT 57.497 33.333 0.00 0.00 32.91 3.85
3564 4305 9.862149 AAAATAATCCATTATACTCCCTTCGTT 57.138 29.630 0.00 0.00 32.91 3.85
3565 4306 9.862149 AAATAATCCATTATACTCCCTTCGTTT 57.138 29.630 0.00 0.00 32.91 3.60
3566 4307 9.862149 AATAATCCATTATACTCCCTTCGTTTT 57.138 29.630 0.00 0.00 32.91 2.43
3567 4308 9.862149 ATAATCCATTATACTCCCTTCGTTTTT 57.138 29.630 0.00 0.00 31.54 1.94
3569 4310 9.862149 AATCCATTATACTCCCTTCGTTTTTAT 57.138 29.630 0.00 0.00 0.00 1.40
3570 4311 9.862149 ATCCATTATACTCCCTTCGTTTTTATT 57.138 29.630 0.00 0.00 0.00 1.40
3571 4312 9.689501 TCCATTATACTCCCTTCGTTTTTATTT 57.310 29.630 0.00 0.00 0.00 1.40
3576 4317 8.728337 ATACTCCCTTCGTTTTTATTTAGTCC 57.272 34.615 0.00 0.00 0.00 3.85
3577 4318 6.776744 ACTCCCTTCGTTTTTATTTAGTCCT 58.223 36.000 0.00 0.00 0.00 3.85
3578 4319 7.229308 ACTCCCTTCGTTTTTATTTAGTCCTT 58.771 34.615 0.00 0.00 0.00 3.36
3579 4320 8.377799 ACTCCCTTCGTTTTTATTTAGTCCTTA 58.622 33.333 0.00 0.00 0.00 2.69
3580 4321 9.392259 CTCCCTTCGTTTTTATTTAGTCCTTAT 57.608 33.333 0.00 0.00 0.00 1.73
3581 4322 9.743581 TCCCTTCGTTTTTATTTAGTCCTTATT 57.256 29.630 0.00 0.00 0.00 1.40
3598 4339 9.794719 AGTCCTTATTTTAGCTTTAGTCAAAGT 57.205 29.630 0.00 0.00 42.71 2.66
3600 4341 9.787435 TCCTTATTTTAGCTTTAGTCAAAGTCA 57.213 29.630 0.00 0.00 42.71 3.41
3603 4344 9.893305 TTATTTTAGCTTTAGTCAAAGTCAAGC 57.107 29.630 0.00 0.00 42.71 4.01
3605 4346 7.568199 TTTAGCTTTAGTCAAAGTCAAGCTT 57.432 32.000 9.81 0.00 46.35 3.74
3606 4347 8.671384 TTTAGCTTTAGTCAAAGTCAAGCTTA 57.329 30.769 9.81 0.00 46.35 3.09
3607 4348 6.793492 AGCTTTAGTCAAAGTCAAGCTTAG 57.207 37.500 0.00 0.00 46.35 2.18
3608 4349 6.292150 AGCTTTAGTCAAAGTCAAGCTTAGT 58.708 36.000 0.00 0.00 46.35 2.24
3609 4350 6.768381 AGCTTTAGTCAAAGTCAAGCTTAGTT 59.232 34.615 0.00 0.00 46.35 2.24
3610 4351 7.283354 AGCTTTAGTCAAAGTCAAGCTTAGTTT 59.717 33.333 0.00 1.07 46.35 2.66
3611 4352 8.557029 GCTTTAGTCAAAGTCAAGCTTAGTTTA 58.443 33.333 0.00 0.00 42.71 2.01
3744 4710 9.545105 TCTATAAACTTGGTCAAACTTTACGAA 57.455 29.630 0.00 0.00 0.00 3.85
3745 4711 9.807386 CTATAAACTTGGTCAAACTTTACGAAG 57.193 33.333 0.00 0.00 37.43 3.79
3821 4844 4.263462 ACTGTCACCTCTAAATTGCATGGA 60.263 41.667 0.00 0.00 0.00 3.41
3845 4868 7.334671 GGAAGGTTTAAGACAAGACCATCTTAG 59.665 40.741 0.00 0.00 38.37 2.18
3982 5425 7.910441 AGGCTAAACAAATCAAATTCCATTG 57.090 32.000 0.00 0.00 0.00 2.82
4007 5450 7.759886 TGACAACAAATCAAACGGTTTATGAAA 59.240 29.630 5.69 0.00 0.00 2.69
4010 5453 8.812329 CAACAAATCAAACGGTTTATGAAAGAA 58.188 29.630 5.69 0.00 0.00 2.52
4011 5454 9.541143 AACAAATCAAACGGTTTATGAAAGAAT 57.459 25.926 5.69 0.00 0.00 2.40
4162 6122 1.153901 CTGGGTGTACAGGTACGCG 60.154 63.158 3.53 3.53 44.93 6.01
4189 6310 6.314152 GCATCATACTAGATCGTAGCACTCTA 59.686 42.308 0.00 0.00 0.00 2.43
4200 6321 5.612351 TCGTAGCACTCTACAGATACTCAT 58.388 41.667 3.75 0.00 44.17 2.90
4209 6330 6.983307 ACTCTACAGATACTCATGCATGAAAC 59.017 38.462 28.39 18.69 36.18 2.78
4211 6332 8.237811 TCTACAGATACTCATGCATGAAACTA 57.762 34.615 28.39 17.94 36.18 2.24
4214 6335 8.565896 ACAGATACTCATGCATGAAACTAAAA 57.434 30.769 28.39 10.43 36.18 1.52
4215 6336 9.182214 ACAGATACTCATGCATGAAACTAAAAT 57.818 29.630 28.39 14.16 36.18 1.82
4216 6337 9.661187 CAGATACTCATGCATGAAACTAAAATC 57.339 33.333 28.39 20.13 36.18 2.17
4217 6338 9.399797 AGATACTCATGCATGAAACTAAAATCA 57.600 29.630 28.39 3.62 36.18 2.57
4219 6340 9.793252 ATACTCATGCATGAAACTAAAATCAAC 57.207 29.630 28.39 0.00 36.18 3.18
4379 6500 5.014202 GCCTTAATGGAACTGAAACCCTAA 58.986 41.667 0.00 0.00 38.35 2.69
4381 6502 6.246163 CCTTAATGGAACTGAAACCCTAACT 58.754 40.000 0.00 0.00 38.35 2.24
4382 6503 6.151144 CCTTAATGGAACTGAAACCCTAACTG 59.849 42.308 0.00 0.00 38.35 3.16
4383 6504 4.724279 ATGGAACTGAAACCCTAACTGT 57.276 40.909 0.00 0.00 0.00 3.55
4384 6505 4.513406 TGGAACTGAAACCCTAACTGTT 57.487 40.909 0.00 0.00 0.00 3.16
4385 6506 4.204012 TGGAACTGAAACCCTAACTGTTG 58.796 43.478 2.69 0.00 0.00 3.33
4387 6508 4.515567 GGAACTGAAACCCTAACTGTTGAG 59.484 45.833 2.69 0.00 0.00 3.02
4389 6510 2.814336 CTGAAACCCTAACTGTTGAGCC 59.186 50.000 2.69 0.00 0.00 4.70
4390 6511 2.160205 GAAACCCTAACTGTTGAGCCC 58.840 52.381 2.69 0.00 0.00 5.19
4424 6672 7.218228 TCTGCAGAATTTGTAAATGACATGT 57.782 32.000 15.67 0.00 38.07 3.21
4455 6707 0.249911 GTGAACGAACTCAGGGTGCT 60.250 55.000 0.00 0.00 0.00 4.40
4630 6882 1.799933 ATGCTAAGAGGGAGTCAGGG 58.200 55.000 0.00 0.00 0.00 4.45
4636 6888 0.264359 AGAGGGAGTCAGGGAGATGG 59.736 60.000 0.00 0.00 0.00 3.51
4644 6896 0.326904 TCAGGGAGATGGCAGATGGT 60.327 55.000 0.00 0.00 0.00 3.55
4660 6916 3.381908 AGATGGTAGTAGTACAGCAGCAC 59.618 47.826 16.66 8.99 31.30 4.40
4737 6993 7.483580 AGTGCTACTCCTACAAGAAATAAGT 57.516 36.000 0.00 0.00 0.00 2.24
4738 6994 8.591114 AGTGCTACTCCTACAAGAAATAAGTA 57.409 34.615 0.00 0.00 0.00 2.24
4739 6995 8.688151 AGTGCTACTCCTACAAGAAATAAGTAG 58.312 37.037 0.00 0.00 38.36 2.57
4740 6996 8.684520 GTGCTACTCCTACAAGAAATAAGTAGA 58.315 37.037 10.05 0.00 37.83 2.59
4741 6997 9.422681 TGCTACTCCTACAAGAAATAAGTAGAT 57.577 33.333 10.05 0.00 37.83 1.98
4767 7023 8.767478 TTTACAGTACAAAATAGTGCTACTCC 57.233 34.615 0.00 0.00 32.49 3.85
4768 7024 6.607004 ACAGTACAAAATAGTGCTACTCCT 57.393 37.500 0.00 0.00 32.49 3.69
4769 7025 7.713734 ACAGTACAAAATAGTGCTACTCCTA 57.286 36.000 0.00 0.00 32.49 2.94
4770 7026 7.545489 ACAGTACAAAATAGTGCTACTCCTAC 58.455 38.462 0.00 0.00 32.49 3.18
4771 7027 7.177921 ACAGTACAAAATAGTGCTACTCCTACA 59.822 37.037 0.00 0.00 32.49 2.74
4772 7028 8.033038 CAGTACAAAATAGTGCTACTCCTACAA 58.967 37.037 0.00 0.00 32.49 2.41
4773 7029 8.251721 AGTACAAAATAGTGCTACTCCTACAAG 58.748 37.037 0.00 0.00 32.49 3.16
4774 7030 7.241042 ACAAAATAGTGCTACTCCTACAAGA 57.759 36.000 0.00 0.00 0.00 3.02
4775 7031 7.676947 ACAAAATAGTGCTACTCCTACAAGAA 58.323 34.615 0.00 0.00 0.00 2.52
4776 7032 8.154856 ACAAAATAGTGCTACTCCTACAAGAAA 58.845 33.333 0.00 0.00 0.00 2.52
4777 7033 9.167311 CAAAATAGTGCTACTCCTACAAGAAAT 57.833 33.333 0.00 0.00 0.00 2.17
4791 7047 5.213891 ACAAGAAATAAGCAAAACCCTGG 57.786 39.130 0.00 0.00 0.00 4.45
4795 7051 4.711846 AGAAATAAGCAAAACCCTGGGATC 59.288 41.667 22.23 3.13 0.00 3.36
4796 7052 3.756082 ATAAGCAAAACCCTGGGATCA 57.244 42.857 22.23 0.00 0.00 2.92
4810 7439 1.344438 GGGATCAGGCATGATGACGTA 59.656 52.381 20.16 0.00 46.39 3.57
4849 7489 7.749570 CACTATCTATGGTTACCGACGATTTAG 59.250 40.741 0.00 0.00 0.00 1.85
4852 7492 6.498304 TCTATGGTTACCGACGATTTAGTTC 58.502 40.000 0.00 0.00 0.00 3.01
4928 7568 0.689055 AGCTGCTCCTCACAACATGA 59.311 50.000 0.00 0.00 35.45 3.07
4936 7576 2.972021 TCCTCACAACATGAAGGACTCA 59.028 45.455 0.00 0.00 36.69 3.41
4942 7582 3.809832 ACAACATGAAGGACTCAAGTTCG 59.190 43.478 0.00 0.00 42.58 3.95
5107 7781 1.068588 CTGGAAAGTGTGACGTCTCCA 59.931 52.381 17.92 17.91 0.00 3.86
5122 7796 1.905894 TCTCCAATTGGACGATCACCA 59.094 47.619 23.63 0.00 39.78 4.17
5187 7861 2.557924 TGCATGAATTTCCGCTTCAAGT 59.442 40.909 0.00 0.00 36.30 3.16
5237 7911 0.179108 GCCGCAAAGATCGTAGTCCT 60.179 55.000 0.00 0.00 0.00 3.85
5362 8052 0.333312 AACAGGGGTTGGACAACACA 59.667 50.000 18.12 0.00 46.17 3.72
5573 8285 6.293955 GCAAGTAATAAGCCAAGTGTTTCTCA 60.294 38.462 0.00 0.00 0.00 3.27
5670 8382 2.554142 GTCACGCCAGATGATGAATCA 58.446 47.619 0.00 0.00 41.70 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.429463 AGCGTTCGATTCACAGGAAC 58.571 50.000 0.00 0.00 35.46 3.62
5 6 1.816835 AGTAGCGTTCGATTCACAGGA 59.183 47.619 0.00 0.00 0.00 3.86
6 7 2.279582 AGTAGCGTTCGATTCACAGG 57.720 50.000 0.00 0.00 0.00 4.00
7 8 3.673338 TGAAAGTAGCGTTCGATTCACAG 59.327 43.478 0.00 0.00 0.00 3.66
8 9 3.644823 TGAAAGTAGCGTTCGATTCACA 58.355 40.909 0.00 0.00 0.00 3.58
9 10 4.842139 ATGAAAGTAGCGTTCGATTCAC 57.158 40.909 0.00 0.00 30.46 3.18
10 11 6.954616 TTTATGAAAGTAGCGTTCGATTCA 57.045 33.333 0.00 0.00 0.00 2.57
11 12 7.453838 AGTTTTATGAAAGTAGCGTTCGATTC 58.546 34.615 0.00 0.00 0.00 2.52
12 13 7.360575 AGTTTTATGAAAGTAGCGTTCGATT 57.639 32.000 0.00 0.00 0.00 3.34
13 14 6.963049 AGTTTTATGAAAGTAGCGTTCGAT 57.037 33.333 0.00 0.00 0.00 3.59
14 15 6.774354 AAGTTTTATGAAAGTAGCGTTCGA 57.226 33.333 0.00 0.00 0.00 3.71
15 16 6.518736 GGAAAGTTTTATGAAAGTAGCGTTCG 59.481 38.462 0.00 0.00 0.00 3.95
16 17 6.800408 GGGAAAGTTTTATGAAAGTAGCGTTC 59.200 38.462 0.00 0.00 0.00 3.95
17 18 6.489022 AGGGAAAGTTTTATGAAAGTAGCGTT 59.511 34.615 0.00 0.00 0.00 4.84
18 19 6.002082 AGGGAAAGTTTTATGAAAGTAGCGT 58.998 36.000 0.00 0.00 0.00 5.07
19 20 6.496338 AGGGAAAGTTTTATGAAAGTAGCG 57.504 37.500 0.00 0.00 0.00 4.26
20 21 7.658261 ACAAGGGAAAGTTTTATGAAAGTAGC 58.342 34.615 0.00 0.00 0.00 3.58
23 24 8.758829 AGAAACAAGGGAAAGTTTTATGAAAGT 58.241 29.630 0.00 0.00 38.01 2.66
24 25 9.599866 AAGAAACAAGGGAAAGTTTTATGAAAG 57.400 29.630 0.00 0.00 38.01 2.62
25 26 9.594478 GAAGAAACAAGGGAAAGTTTTATGAAA 57.406 29.630 0.00 0.00 38.01 2.69
26 27 8.977412 AGAAGAAACAAGGGAAAGTTTTATGAA 58.023 29.630 0.00 0.00 38.01 2.57
27 28 8.533569 AGAAGAAACAAGGGAAAGTTTTATGA 57.466 30.769 0.00 0.00 38.01 2.15
28 29 9.249457 GAAGAAGAAACAAGGGAAAGTTTTATG 57.751 33.333 0.00 0.00 38.01 1.90
29 30 8.421784 GGAAGAAGAAACAAGGGAAAGTTTTAT 58.578 33.333 0.00 0.00 38.01 1.40
30 31 7.618117 AGGAAGAAGAAACAAGGGAAAGTTTTA 59.382 33.333 0.00 0.00 38.01 1.52
31 32 6.440647 AGGAAGAAGAAACAAGGGAAAGTTTT 59.559 34.615 0.00 0.00 38.01 2.43
32 33 5.958380 AGGAAGAAGAAACAAGGGAAAGTTT 59.042 36.000 0.00 0.00 40.38 2.66
33 34 5.360999 CAGGAAGAAGAAACAAGGGAAAGTT 59.639 40.000 0.00 0.00 0.00 2.66
34 35 4.889995 CAGGAAGAAGAAACAAGGGAAAGT 59.110 41.667 0.00 0.00 0.00 2.66
35 36 4.889995 ACAGGAAGAAGAAACAAGGGAAAG 59.110 41.667 0.00 0.00 0.00 2.62
36 37 4.867086 ACAGGAAGAAGAAACAAGGGAAA 58.133 39.130 0.00 0.00 0.00 3.13
37 38 4.519906 ACAGGAAGAAGAAACAAGGGAA 57.480 40.909 0.00 0.00 0.00 3.97
38 39 4.658901 AGTACAGGAAGAAGAAACAAGGGA 59.341 41.667 0.00 0.00 0.00 4.20
39 40 4.974399 AGTACAGGAAGAAGAAACAAGGG 58.026 43.478 0.00 0.00 0.00 3.95
40 41 6.944234 AAAGTACAGGAAGAAGAAACAAGG 57.056 37.500 0.00 0.00 0.00 3.61
41 42 7.283354 AGGAAAAGTACAGGAAGAAGAAACAAG 59.717 37.037 0.00 0.00 0.00 3.16
42 43 7.116736 AGGAAAAGTACAGGAAGAAGAAACAA 58.883 34.615 0.00 0.00 0.00 2.83
43 44 6.659824 AGGAAAAGTACAGGAAGAAGAAACA 58.340 36.000 0.00 0.00 0.00 2.83
44 45 6.205076 GGAGGAAAAGTACAGGAAGAAGAAAC 59.795 42.308 0.00 0.00 0.00 2.78
45 46 6.126594 TGGAGGAAAAGTACAGGAAGAAGAAA 60.127 38.462 0.00 0.00 0.00 2.52
46 47 5.368523 TGGAGGAAAAGTACAGGAAGAAGAA 59.631 40.000 0.00 0.00 0.00 2.52
47 48 4.905456 TGGAGGAAAAGTACAGGAAGAAGA 59.095 41.667 0.00 0.00 0.00 2.87
48 49 4.998033 GTGGAGGAAAAGTACAGGAAGAAG 59.002 45.833 0.00 0.00 0.00 2.85
49 50 4.410883 TGTGGAGGAAAAGTACAGGAAGAA 59.589 41.667 0.00 0.00 0.00 2.52
50 51 3.971305 TGTGGAGGAAAAGTACAGGAAGA 59.029 43.478 0.00 0.00 0.00 2.87
51 52 4.351874 TGTGGAGGAAAAGTACAGGAAG 57.648 45.455 0.00 0.00 0.00 3.46
52 53 4.781775 TTGTGGAGGAAAAGTACAGGAA 57.218 40.909 0.00 0.00 0.00 3.36
53 54 4.993705 ATTGTGGAGGAAAAGTACAGGA 57.006 40.909 0.00 0.00 0.00 3.86
54 55 4.459337 GGAATTGTGGAGGAAAAGTACAGG 59.541 45.833 0.00 0.00 0.00 4.00
55 56 5.316987 AGGAATTGTGGAGGAAAAGTACAG 58.683 41.667 0.00 0.00 0.00 2.74
56 57 5.319043 AGGAATTGTGGAGGAAAAGTACA 57.681 39.130 0.00 0.00 0.00 2.90
57 58 5.768164 TGAAGGAATTGTGGAGGAAAAGTAC 59.232 40.000 0.00 0.00 0.00 2.73
58 59 5.947663 TGAAGGAATTGTGGAGGAAAAGTA 58.052 37.500 0.00 0.00 0.00 2.24
59 60 4.803452 TGAAGGAATTGTGGAGGAAAAGT 58.197 39.130 0.00 0.00 0.00 2.66
60 61 5.789643 TTGAAGGAATTGTGGAGGAAAAG 57.210 39.130 0.00 0.00 0.00 2.27
61 62 5.163353 GGTTTGAAGGAATTGTGGAGGAAAA 60.163 40.000 0.00 0.00 0.00 2.29
62 63 4.343814 GGTTTGAAGGAATTGTGGAGGAAA 59.656 41.667 0.00 0.00 0.00 3.13
63 64 3.895041 GGTTTGAAGGAATTGTGGAGGAA 59.105 43.478 0.00 0.00 0.00 3.36
64 65 3.117322 TGGTTTGAAGGAATTGTGGAGGA 60.117 43.478 0.00 0.00 0.00 3.71
65 66 3.230134 TGGTTTGAAGGAATTGTGGAGG 58.770 45.455 0.00 0.00 0.00 4.30
66 67 4.935352 TTGGTTTGAAGGAATTGTGGAG 57.065 40.909 0.00 0.00 0.00 3.86
67 68 4.440802 CGTTTGGTTTGAAGGAATTGTGGA 60.441 41.667 0.00 0.00 0.00 4.02
68 69 3.801594 CGTTTGGTTTGAAGGAATTGTGG 59.198 43.478 0.00 0.00 0.00 4.17
69 70 4.429108 ACGTTTGGTTTGAAGGAATTGTG 58.571 39.130 0.00 0.00 0.00 3.33
70 71 4.729227 ACGTTTGGTTTGAAGGAATTGT 57.271 36.364 0.00 0.00 0.00 2.71
71 72 4.679654 GCTACGTTTGGTTTGAAGGAATTG 59.320 41.667 0.00 0.00 0.00 2.32
72 73 4.583073 AGCTACGTTTGGTTTGAAGGAATT 59.417 37.500 0.00 0.00 0.00 2.17
73 74 4.142038 AGCTACGTTTGGTTTGAAGGAAT 58.858 39.130 0.00 0.00 0.00 3.01
74 75 3.547746 AGCTACGTTTGGTTTGAAGGAA 58.452 40.909 0.00 0.00 0.00 3.36
75 76 3.202829 AGCTACGTTTGGTTTGAAGGA 57.797 42.857 0.00 0.00 0.00 3.36
76 77 3.982576 AAGCTACGTTTGGTTTGAAGG 57.017 42.857 0.00 0.00 0.00 3.46
77 78 7.360361 AGAATTAAGCTACGTTTGGTTTGAAG 58.640 34.615 10.13 0.00 0.00 3.02
78 79 7.266922 AGAATTAAGCTACGTTTGGTTTGAA 57.733 32.000 10.13 2.30 0.00 2.69
79 80 6.870971 AGAATTAAGCTACGTTTGGTTTGA 57.129 33.333 10.13 2.66 0.00 2.69
80 81 9.916397 CTATAGAATTAAGCTACGTTTGGTTTG 57.084 33.333 10.13 0.00 0.00 2.93
81 82 9.106070 CCTATAGAATTAAGCTACGTTTGGTTT 57.894 33.333 0.00 1.80 0.00 3.27
82 83 8.480501 TCCTATAGAATTAAGCTACGTTTGGTT 58.519 33.333 0.00 1.79 0.00 3.67
83 84 8.015185 TCCTATAGAATTAAGCTACGTTTGGT 57.985 34.615 0.00 0.00 0.00 3.67
87 88 9.750783 TCCTATCCTATAGAATTAAGCTACGTT 57.249 33.333 0.00 0.00 0.00 3.99
88 89 9.924010 ATCCTATCCTATAGAATTAAGCTACGT 57.076 33.333 0.00 0.00 0.00 3.57
136 137 9.851267 ATCCATTCCTATAAACTAGAAGGATCT 57.149 33.333 0.00 0.00 37.94 2.75
139 140 9.676129 AGAATCCATTCCTATAAACTAGAAGGA 57.324 33.333 0.00 0.00 37.51 3.36
168 169 9.716556 AGGATAGAAACTAATCTCACTTAGGAA 57.283 33.333 0.00 0.00 33.79 3.36
169 170 9.357161 GAGGATAGAAACTAATCTCACTTAGGA 57.643 37.037 0.00 0.00 33.79 2.94
170 171 8.581578 GGAGGATAGAAACTAATCTCACTTAGG 58.418 40.741 0.00 0.00 33.79 2.69
171 172 9.137459 TGGAGGATAGAAACTAATCTCACTTAG 57.863 37.037 0.00 0.00 35.31 2.18
172 173 8.915036 GTGGAGGATAGAAACTAATCTCACTTA 58.085 37.037 0.00 0.00 0.00 2.24
173 174 7.400339 TGTGGAGGATAGAAACTAATCTCACTT 59.600 37.037 0.00 0.00 0.00 3.16
174 175 6.897966 TGTGGAGGATAGAAACTAATCTCACT 59.102 38.462 0.00 0.00 0.00 3.41
175 176 7.113658 TGTGGAGGATAGAAACTAATCTCAC 57.886 40.000 0.00 0.00 0.00 3.51
176 177 7.921041 ATGTGGAGGATAGAAACTAATCTCA 57.079 36.000 0.00 0.00 0.00 3.27
177 178 9.267084 GAAATGTGGAGGATAGAAACTAATCTC 57.733 37.037 0.00 0.00 0.00 2.75
178 179 8.772250 TGAAATGTGGAGGATAGAAACTAATCT 58.228 33.333 0.00 0.00 0.00 2.40
179 180 8.964476 TGAAATGTGGAGGATAGAAACTAATC 57.036 34.615 0.00 0.00 0.00 1.75
180 181 9.753674 TTTGAAATGTGGAGGATAGAAACTAAT 57.246 29.630 0.00 0.00 0.00 1.73
181 182 9.581289 TTTTGAAATGTGGAGGATAGAAACTAA 57.419 29.630 0.00 0.00 0.00 2.24
182 183 9.581289 TTTTTGAAATGTGGAGGATAGAAACTA 57.419 29.630 0.00 0.00 0.00 2.24
183 184 8.477419 TTTTTGAAATGTGGAGGATAGAAACT 57.523 30.769 0.00 0.00 0.00 2.66
244 245 2.879026 GAGAAGTCCTTTGGTTCACACC 59.121 50.000 0.00 0.00 44.56 4.16
245 246 3.809905 AGAGAAGTCCTTTGGTTCACAC 58.190 45.455 0.00 0.00 0.00 3.82
246 247 4.503714 AAGAGAAGTCCTTTGGTTCACA 57.496 40.909 0.00 0.00 0.00 3.58
247 248 5.836821 AAAAGAGAAGTCCTTTGGTTCAC 57.163 39.130 0.00 0.00 34.42 3.18
269 270 3.616219 AGCCGAGCCACATACATAAAAA 58.384 40.909 0.00 0.00 0.00 1.94
270 271 3.275617 AGCCGAGCCACATACATAAAA 57.724 42.857 0.00 0.00 0.00 1.52
271 272 2.942376 CAAGCCGAGCCACATACATAAA 59.058 45.455 0.00 0.00 0.00 1.40
272 273 2.560504 CAAGCCGAGCCACATACATAA 58.439 47.619 0.00 0.00 0.00 1.90
273 274 1.202639 CCAAGCCGAGCCACATACATA 60.203 52.381 0.00 0.00 0.00 2.29
274 275 0.464373 CCAAGCCGAGCCACATACAT 60.464 55.000 0.00 0.00 0.00 2.29
275 276 1.078497 CCAAGCCGAGCCACATACA 60.078 57.895 0.00 0.00 0.00 2.29
276 277 1.819632 CCCAAGCCGAGCCACATAC 60.820 63.158 0.00 0.00 0.00 2.39
277 278 2.589540 CCCAAGCCGAGCCACATA 59.410 61.111 0.00 0.00 0.00 2.29
281 282 4.722700 GAAGCCCAAGCCGAGCCA 62.723 66.667 0.00 0.00 41.25 4.75
288 289 2.574018 AAAAGCCGGAAGCCCAAGC 61.574 57.895 5.05 0.00 45.47 4.01
289 290 1.178534 TCAAAAGCCGGAAGCCCAAG 61.179 55.000 5.05 0.00 45.47 3.61
290 291 0.541764 ATCAAAAGCCGGAAGCCCAA 60.542 50.000 5.05 0.00 45.47 4.12
291 292 1.076549 ATCAAAAGCCGGAAGCCCA 59.923 52.632 5.05 0.00 45.47 5.36
292 293 1.250840 ACATCAAAAGCCGGAAGCCC 61.251 55.000 5.05 0.00 45.47 5.19
293 294 0.603065 AACATCAAAAGCCGGAAGCC 59.397 50.000 5.05 0.00 45.47 4.35
294 295 1.669795 CCAACATCAAAAGCCGGAAGC 60.670 52.381 5.05 0.00 44.25 3.86
295 296 1.067635 CCCAACATCAAAAGCCGGAAG 60.068 52.381 5.05 0.00 0.00 3.46
296 297 0.965439 CCCAACATCAAAAGCCGGAA 59.035 50.000 5.05 0.00 0.00 4.30
297 298 1.531739 GCCCAACATCAAAAGCCGGA 61.532 55.000 5.05 0.00 0.00 5.14
298 299 1.079888 GCCCAACATCAAAAGCCGG 60.080 57.895 0.00 0.00 0.00 6.13
299 300 0.318120 AAGCCCAACATCAAAAGCCG 59.682 50.000 0.00 0.00 0.00 5.52
300 301 2.094026 CCTAAGCCCAACATCAAAAGCC 60.094 50.000 0.00 0.00 0.00 4.35
301 302 2.562738 ACCTAAGCCCAACATCAAAAGC 59.437 45.455 0.00 0.00 0.00 3.51
302 303 3.826157 TCACCTAAGCCCAACATCAAAAG 59.174 43.478 0.00 0.00 0.00 2.27
303 304 3.826157 CTCACCTAAGCCCAACATCAAAA 59.174 43.478 0.00 0.00 0.00 2.44
304 305 3.181434 ACTCACCTAAGCCCAACATCAAA 60.181 43.478 0.00 0.00 0.00 2.69
305 306 2.375174 ACTCACCTAAGCCCAACATCAA 59.625 45.455 0.00 0.00 0.00 2.57
306 307 1.985159 ACTCACCTAAGCCCAACATCA 59.015 47.619 0.00 0.00 0.00 3.07
307 308 2.359900 CACTCACCTAAGCCCAACATC 58.640 52.381 0.00 0.00 0.00 3.06
308 309 1.004745 CCACTCACCTAAGCCCAACAT 59.995 52.381 0.00 0.00 0.00 2.71
309 310 0.400213 CCACTCACCTAAGCCCAACA 59.600 55.000 0.00 0.00 0.00 3.33
310 311 0.400594 ACCACTCACCTAAGCCCAAC 59.599 55.000 0.00 0.00 0.00 3.77
311 312 0.690762 GACCACTCACCTAAGCCCAA 59.309 55.000 0.00 0.00 0.00 4.12
312 313 0.178903 AGACCACTCACCTAAGCCCA 60.179 55.000 0.00 0.00 0.00 5.36
313 314 0.250513 CAGACCACTCACCTAAGCCC 59.749 60.000 0.00 0.00 0.00 5.19
314 315 0.250513 CCAGACCACTCACCTAAGCC 59.749 60.000 0.00 0.00 0.00 4.35
315 316 0.250513 CCCAGACCACTCACCTAAGC 59.749 60.000 0.00 0.00 0.00 3.09
316 317 1.645710 ACCCAGACCACTCACCTAAG 58.354 55.000 0.00 0.00 0.00 2.18
317 318 2.111255 ACTACCCAGACCACTCACCTAA 59.889 50.000 0.00 0.00 0.00 2.69
318 319 1.714787 ACTACCCAGACCACTCACCTA 59.285 52.381 0.00 0.00 0.00 3.08
319 320 0.487772 ACTACCCAGACCACTCACCT 59.512 55.000 0.00 0.00 0.00 4.00
320 321 0.608640 CACTACCCAGACCACTCACC 59.391 60.000 0.00 0.00 0.00 4.02
321 322 0.608640 CCACTACCCAGACCACTCAC 59.391 60.000 0.00 0.00 0.00 3.51
322 323 1.192146 GCCACTACCCAGACCACTCA 61.192 60.000 0.00 0.00 0.00 3.41
323 324 0.905337 AGCCACTACCCAGACCACTC 60.905 60.000 0.00 0.00 0.00 3.51
324 325 0.905337 GAGCCACTACCCAGACCACT 60.905 60.000 0.00 0.00 0.00 4.00
325 326 1.192146 TGAGCCACTACCCAGACCAC 61.192 60.000 0.00 0.00 0.00 4.16
326 327 0.904865 CTGAGCCACTACCCAGACCA 60.905 60.000 0.00 0.00 0.00 4.02
327 328 1.901085 CTGAGCCACTACCCAGACC 59.099 63.158 0.00 0.00 0.00 3.85
328 329 1.219393 GCTGAGCCACTACCCAGAC 59.781 63.158 0.00 0.00 0.00 3.51
329 330 0.335019 TAGCTGAGCCACTACCCAGA 59.665 55.000 0.00 0.00 0.00 3.86
330 331 0.749649 CTAGCTGAGCCACTACCCAG 59.250 60.000 0.00 0.00 0.00 4.45
331 332 1.330655 GCTAGCTGAGCCACTACCCA 61.331 60.000 7.70 0.00 46.41 4.51
332 333 1.443828 GCTAGCTGAGCCACTACCC 59.556 63.158 7.70 0.00 46.41 3.69
341 342 0.835941 ATGAAGGGGTGCTAGCTGAG 59.164 55.000 17.23 0.00 0.00 3.35
342 343 0.833287 GATGAAGGGGTGCTAGCTGA 59.167 55.000 17.23 0.00 0.00 4.26
343 344 0.543277 TGATGAAGGGGTGCTAGCTG 59.457 55.000 17.23 0.00 0.00 4.24
344 345 1.516110 ATGATGAAGGGGTGCTAGCT 58.484 50.000 17.23 0.00 0.00 3.32
345 346 2.355010 AATGATGAAGGGGTGCTAGC 57.645 50.000 8.10 8.10 0.00 3.42
346 347 4.272489 TCAAAATGATGAAGGGGTGCTAG 58.728 43.478 0.00 0.00 0.00 3.42
347 348 4.314522 TCAAAATGATGAAGGGGTGCTA 57.685 40.909 0.00 0.00 0.00 3.49
348 349 3.173953 TCAAAATGATGAAGGGGTGCT 57.826 42.857 0.00 0.00 0.00 4.40
359 360 8.985315 TCATCTAAGCCTAACATCAAAATGAT 57.015 30.769 0.00 0.00 37.65 2.45
360 361 8.049117 ACTCATCTAAGCCTAACATCAAAATGA 58.951 33.333 0.00 0.00 36.67 2.57
361 362 8.127327 CACTCATCTAAGCCTAACATCAAAATG 58.873 37.037 0.00 0.00 38.93 2.32
362 363 7.284034 CCACTCATCTAAGCCTAACATCAAAAT 59.716 37.037 0.00 0.00 0.00 1.82
363 364 6.599244 CCACTCATCTAAGCCTAACATCAAAA 59.401 38.462 0.00 0.00 0.00 2.44
364 365 6.115446 CCACTCATCTAAGCCTAACATCAAA 58.885 40.000 0.00 0.00 0.00 2.69
365 366 5.189736 ACCACTCATCTAAGCCTAACATCAA 59.810 40.000 0.00 0.00 0.00 2.57
366 367 4.716784 ACCACTCATCTAAGCCTAACATCA 59.283 41.667 0.00 0.00 0.00 3.07
367 368 5.069781 AGACCACTCATCTAAGCCTAACATC 59.930 44.000 0.00 0.00 0.00 3.06
368 369 4.965532 AGACCACTCATCTAAGCCTAACAT 59.034 41.667 0.00 0.00 0.00 2.71
369 370 4.160439 CAGACCACTCATCTAAGCCTAACA 59.840 45.833 0.00 0.00 0.00 2.41
370 371 4.442192 CCAGACCACTCATCTAAGCCTAAC 60.442 50.000 0.00 0.00 0.00 2.34
371 372 3.706594 CCAGACCACTCATCTAAGCCTAA 59.293 47.826 0.00 0.00 0.00 2.69
372 373 3.300388 CCAGACCACTCATCTAAGCCTA 58.700 50.000 0.00 0.00 0.00 3.93
373 374 2.114616 CCAGACCACTCATCTAAGCCT 58.885 52.381 0.00 0.00 0.00 4.58
374 375 1.139853 CCCAGACCACTCATCTAAGCC 59.860 57.143 0.00 0.00 0.00 4.35
375 376 1.834263 ACCCAGACCACTCATCTAAGC 59.166 52.381 0.00 0.00 0.00 3.09
376 377 4.098654 CACTACCCAGACCACTCATCTAAG 59.901 50.000 0.00 0.00 0.00 2.18
377 378 4.023980 CACTACCCAGACCACTCATCTAA 58.976 47.826 0.00 0.00 0.00 2.10
378 379 3.627492 CCACTACCCAGACCACTCATCTA 60.627 52.174 0.00 0.00 0.00 1.98
379 380 2.461695 CACTACCCAGACCACTCATCT 58.538 52.381 0.00 0.00 0.00 2.90
380 381 1.482593 CCACTACCCAGACCACTCATC 59.517 57.143 0.00 0.00 0.00 2.92
381 382 1.573108 CCACTACCCAGACCACTCAT 58.427 55.000 0.00 0.00 0.00 2.90
382 383 1.192146 GCCACTACCCAGACCACTCA 61.192 60.000 0.00 0.00 0.00 3.41
383 384 1.597461 GCCACTACCCAGACCACTC 59.403 63.158 0.00 0.00 0.00 3.51
384 385 1.918800 GGCCACTACCCAGACCACT 60.919 63.158 0.00 0.00 0.00 4.00
385 386 0.616679 TAGGCCACTACCCAGACCAC 60.617 60.000 5.01 0.00 0.00 4.16
386 387 0.325296 CTAGGCCACTACCCAGACCA 60.325 60.000 5.01 0.00 0.00 4.02
387 388 1.687297 GCTAGGCCACTACCCAGACC 61.687 65.000 5.01 0.00 0.00 3.85
388 389 0.688087 AGCTAGGCCACTACCCAGAC 60.688 60.000 5.01 0.00 0.00 3.51
389 390 0.931468 TAGCTAGGCCACTACCCAGA 59.069 55.000 5.01 0.00 0.00 3.86
390 391 1.413077 GTTAGCTAGGCCACTACCCAG 59.587 57.143 5.01 0.00 0.00 4.45
391 392 1.273381 TGTTAGCTAGGCCACTACCCA 60.273 52.381 5.01 0.53 0.00 4.51
392 393 1.138464 GTGTTAGCTAGGCCACTACCC 59.862 57.143 5.01 0.00 0.00 3.69
393 394 1.202382 CGTGTTAGCTAGGCCACTACC 60.202 57.143 5.01 0.00 0.00 3.18
394 395 1.801765 GCGTGTTAGCTAGGCCACTAC 60.802 57.143 5.01 0.00 0.00 2.73
395 396 0.458669 GCGTGTTAGCTAGGCCACTA 59.541 55.000 5.01 0.00 0.00 2.74
396 397 1.218316 GCGTGTTAGCTAGGCCACT 59.782 57.895 5.01 1.03 0.00 4.00
397 398 1.814169 GGCGTGTTAGCTAGGCCAC 60.814 63.158 12.70 10.78 45.74 5.01
398 399 2.582436 GGCGTGTTAGCTAGGCCA 59.418 61.111 12.70 0.50 45.74 5.36
399 400 0.810426 GAAGGCGTGTTAGCTAGGCC 60.810 60.000 10.13 10.13 46.55 5.19
400 401 0.108329 TGAAGGCGTGTTAGCTAGGC 60.108 55.000 0.00 0.00 37.29 3.93
401 402 2.159099 TGATGAAGGCGTGTTAGCTAGG 60.159 50.000 0.00 0.00 37.29 3.02
402 403 3.165058 TGATGAAGGCGTGTTAGCTAG 57.835 47.619 0.00 0.00 37.29 3.42
403 404 3.819564 ATGATGAAGGCGTGTTAGCTA 57.180 42.857 0.00 0.00 37.29 3.32
404 405 2.698855 ATGATGAAGGCGTGTTAGCT 57.301 45.000 0.00 0.00 37.29 3.32
405 406 3.126858 TCAAATGATGAAGGCGTGTTAGC 59.873 43.478 0.00 0.00 34.30 3.09
406 407 4.944962 TCAAATGATGAAGGCGTGTTAG 57.055 40.909 0.00 0.00 34.30 2.34
417 418 5.466728 GCCGCTACTTCTATTCAAATGATGA 59.533 40.000 0.00 0.00 35.85 2.92
418 419 5.237127 TGCCGCTACTTCTATTCAAATGATG 59.763 40.000 0.00 0.00 0.00 3.07
419 420 5.368145 TGCCGCTACTTCTATTCAAATGAT 58.632 37.500 0.00 0.00 0.00 2.45
420 421 4.765273 TGCCGCTACTTCTATTCAAATGA 58.235 39.130 0.00 0.00 0.00 2.57
421 422 5.484173 TTGCCGCTACTTCTATTCAAATG 57.516 39.130 0.00 0.00 0.00 2.32
422 423 6.095440 ACATTTGCCGCTACTTCTATTCAAAT 59.905 34.615 0.00 0.00 34.44 2.32
423 424 5.414454 ACATTTGCCGCTACTTCTATTCAAA 59.586 36.000 0.00 0.00 0.00 2.69
424 425 4.941263 ACATTTGCCGCTACTTCTATTCAA 59.059 37.500 0.00 0.00 0.00 2.69
425 426 4.513442 ACATTTGCCGCTACTTCTATTCA 58.487 39.130 0.00 0.00 0.00 2.57
426 427 5.266242 CAACATTTGCCGCTACTTCTATTC 58.734 41.667 0.00 0.00 0.00 1.75
427 428 5.235305 CAACATTTGCCGCTACTTCTATT 57.765 39.130 0.00 0.00 0.00 1.73
428 429 4.882671 CAACATTTGCCGCTACTTCTAT 57.117 40.909 0.00 0.00 0.00 1.98
450 451 1.450531 GCCTGAATCCGCCATCTTGG 61.451 60.000 0.00 0.00 41.55 3.61
451 452 0.749091 TGCCTGAATCCGCCATCTTG 60.749 55.000 0.00 0.00 0.00 3.02
452 453 0.184451 ATGCCTGAATCCGCCATCTT 59.816 50.000 0.00 0.00 0.00 2.40
453 454 1.059098 TATGCCTGAATCCGCCATCT 58.941 50.000 0.00 0.00 0.00 2.90
454 455 2.119801 ATATGCCTGAATCCGCCATC 57.880 50.000 0.00 0.00 0.00 3.51
455 456 2.165167 CAATATGCCTGAATCCGCCAT 58.835 47.619 0.00 0.00 0.00 4.40
456 457 1.133823 ACAATATGCCTGAATCCGCCA 60.134 47.619 0.00 0.00 0.00 5.69
457 458 1.609208 ACAATATGCCTGAATCCGCC 58.391 50.000 0.00 0.00 0.00 6.13
458 459 2.358898 ACAACAATATGCCTGAATCCGC 59.641 45.455 0.00 0.00 0.00 5.54
459 460 5.749596 TTACAACAATATGCCTGAATCCG 57.250 39.130 0.00 0.00 0.00 4.18
460 461 8.396272 AGTATTACAACAATATGCCTGAATCC 57.604 34.615 0.00 0.00 0.00 3.01
463 464 9.019656 ACAAAGTATTACAACAATATGCCTGAA 57.980 29.630 0.00 0.00 0.00 3.02
464 465 8.574251 ACAAAGTATTACAACAATATGCCTGA 57.426 30.769 0.00 0.00 0.00 3.86
467 468 9.730420 CCTTACAAAGTATTACAACAATATGCC 57.270 33.333 0.00 0.00 0.00 4.40
472 473 9.227777 GAGGACCTTACAAAGTATTACAACAAT 57.772 33.333 0.00 0.00 0.00 2.71
473 474 7.385752 CGAGGACCTTACAAAGTATTACAACAA 59.614 37.037 0.00 0.00 0.00 2.83
474 475 6.869913 CGAGGACCTTACAAAGTATTACAACA 59.130 38.462 0.00 0.00 0.00 3.33
475 476 7.092716 TCGAGGACCTTACAAAGTATTACAAC 58.907 38.462 0.00 0.00 0.00 3.32
476 477 7.177216 TCTCGAGGACCTTACAAAGTATTACAA 59.823 37.037 13.56 0.00 0.00 2.41
477 478 6.660521 TCTCGAGGACCTTACAAAGTATTACA 59.339 38.462 13.56 0.00 0.00 2.41
478 479 7.093322 TCTCGAGGACCTTACAAAGTATTAC 57.907 40.000 13.56 0.00 0.00 1.89
479 480 7.707624 TTCTCGAGGACCTTACAAAGTATTA 57.292 36.000 13.56 0.00 0.00 0.98
480 481 6.600882 TTCTCGAGGACCTTACAAAGTATT 57.399 37.500 13.56 0.00 0.00 1.89
481 482 6.793505 ATTCTCGAGGACCTTACAAAGTAT 57.206 37.500 13.56 0.00 0.00 2.12
482 483 7.707624 TTATTCTCGAGGACCTTACAAAGTA 57.292 36.000 13.56 0.00 0.00 2.24
483 484 6.600882 TTATTCTCGAGGACCTTACAAAGT 57.399 37.500 13.56 0.00 0.00 2.66
484 485 7.265673 TGATTATTCTCGAGGACCTTACAAAG 58.734 38.462 13.56 0.00 0.00 2.77
485 486 7.177832 TGATTATTCTCGAGGACCTTACAAA 57.822 36.000 13.56 0.00 0.00 2.83
486 487 6.785337 TGATTATTCTCGAGGACCTTACAA 57.215 37.500 13.56 0.00 0.00 2.41
487 488 6.785337 TTGATTATTCTCGAGGACCTTACA 57.215 37.500 13.56 3.04 0.00 2.41
488 489 9.760077 TTTATTGATTATTCTCGAGGACCTTAC 57.240 33.333 13.56 0.40 0.00 2.34
489 490 9.982651 CTTTATTGATTATTCTCGAGGACCTTA 57.017 33.333 13.56 0.00 0.00 2.69
490 491 8.487028 ACTTTATTGATTATTCTCGAGGACCTT 58.513 33.333 13.56 0.00 0.00 3.50
491 492 7.928706 CACTTTATTGATTATTCTCGAGGACCT 59.071 37.037 13.56 0.00 0.00 3.85
492 493 7.171678 CCACTTTATTGATTATTCTCGAGGACC 59.828 40.741 13.56 0.00 0.00 4.46
493 494 7.307455 GCCACTTTATTGATTATTCTCGAGGAC 60.307 40.741 13.56 0.00 0.00 3.85
494 495 6.706270 GCCACTTTATTGATTATTCTCGAGGA 59.294 38.462 13.56 3.44 0.00 3.71
495 496 6.073003 GGCCACTTTATTGATTATTCTCGAGG 60.073 42.308 13.56 0.00 0.00 4.63
496 497 6.346919 CGGCCACTTTATTGATTATTCTCGAG 60.347 42.308 5.93 5.93 0.00 4.04
497 498 5.465390 CGGCCACTTTATTGATTATTCTCGA 59.535 40.000 2.24 0.00 0.00 4.04
498 499 5.679906 CGGCCACTTTATTGATTATTCTCG 58.320 41.667 2.24 0.00 0.00 4.04
499 500 5.008613 TGCGGCCACTTTATTGATTATTCTC 59.991 40.000 2.24 0.00 0.00 2.87
500 501 4.887071 TGCGGCCACTTTATTGATTATTCT 59.113 37.500 2.24 0.00 0.00 2.40
501 502 5.181690 TGCGGCCACTTTATTGATTATTC 57.818 39.130 2.24 0.00 0.00 1.75
502 503 5.531634 CATGCGGCCACTTTATTGATTATT 58.468 37.500 2.24 0.00 0.00 1.40
503 504 4.559300 GCATGCGGCCACTTTATTGATTAT 60.559 41.667 0.00 0.00 36.11 1.28
504 505 3.243367 GCATGCGGCCACTTTATTGATTA 60.243 43.478 0.00 0.00 36.11 1.75
505 506 2.481795 GCATGCGGCCACTTTATTGATT 60.482 45.455 0.00 0.00 36.11 2.57
506 507 1.067516 GCATGCGGCCACTTTATTGAT 59.932 47.619 0.00 0.00 36.11 2.57
507 508 0.455410 GCATGCGGCCACTTTATTGA 59.545 50.000 0.00 0.00 36.11 2.57
508 509 0.173029 TGCATGCGGCCACTTTATTG 59.827 50.000 14.09 0.00 43.89 1.90
509 510 1.067516 GATGCATGCGGCCACTTTATT 59.932 47.619 14.09 0.00 43.89 1.40
510 511 0.670162 GATGCATGCGGCCACTTTAT 59.330 50.000 14.09 0.00 43.89 1.40
511 512 0.394216 AGATGCATGCGGCCACTTTA 60.394 50.000 14.09 0.00 43.89 1.85
512 513 1.660560 GAGATGCATGCGGCCACTTT 61.661 55.000 14.09 0.00 43.89 2.66
513 514 2.044650 AGATGCATGCGGCCACTT 60.045 55.556 14.09 0.00 43.89 3.16
514 515 2.515523 GAGATGCATGCGGCCACT 60.516 61.111 14.09 7.37 43.89 4.00
515 516 3.589881 GGAGATGCATGCGGCCAC 61.590 66.667 14.09 0.00 43.89 5.01
516 517 4.881440 GGGAGATGCATGCGGCCA 62.881 66.667 14.09 0.00 43.89 5.36
517 518 4.881440 TGGGAGATGCATGCGGCC 62.881 66.667 14.09 10.99 43.89 6.13
518 519 3.285215 CTGGGAGATGCATGCGGC 61.285 66.667 14.09 7.38 45.13 6.53
519 520 1.072678 ATCTGGGAGATGCATGCGG 59.927 57.895 14.09 0.00 32.80 5.69
520 521 2.244946 CATCTGGGAGATGCATGCG 58.755 57.895 14.09 0.00 44.69 4.73
527 528 1.417288 GGCCTCTGCATCTGGGAGAT 61.417 60.000 0.00 0.00 43.58 2.75
528 529 2.068821 GGCCTCTGCATCTGGGAGA 61.069 63.158 0.00 0.00 42.24 3.71
529 530 2.509916 GGCCTCTGCATCTGGGAG 59.490 66.667 0.00 0.00 40.13 4.30
530 531 3.473647 CGGCCTCTGCATCTGGGA 61.474 66.667 0.00 0.00 40.13 4.37
531 532 4.559063 CCGGCCTCTGCATCTGGG 62.559 72.222 0.00 0.00 40.13 4.45
532 533 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
533 534 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
539 540 3.866582 GATGACCCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
545 546 1.571773 AAAAGGAGGATGACCCCCGG 61.572 60.000 0.00 0.00 36.73 5.73
546 547 0.107165 GAAAAGGAGGATGACCCCCG 60.107 60.000 0.00 0.00 36.73 5.73
547 548 1.299939 AGAAAAGGAGGATGACCCCC 58.700 55.000 0.00 0.00 36.73 5.40
548 549 4.586306 TTTAGAAAAGGAGGATGACCCC 57.414 45.455 0.00 0.00 36.73 4.95
574 575 9.851686 TGACATGTATCTTAAATCTTATGGCTT 57.148 29.630 0.00 0.00 0.00 4.35
638 639 6.275461 AGGCCTCATTTAGTCCATAGGATAT 58.725 40.000 0.00 0.00 32.73 1.63
691 692 4.151689 TGATTTGATCCAACGTCGAAAGTC 59.848 41.667 0.00 0.00 0.00 3.01
721 722 2.509336 GAGTGGCATCCGACGGTG 60.509 66.667 14.79 12.44 0.00 4.94
727 728 2.401766 GGCAAGTGAGTGGCATCCG 61.402 63.158 0.00 0.00 43.33 4.18
779 781 0.178929 AGGAGAAACGGGACAGTCCT 60.179 55.000 19.57 0.00 36.57 3.85
824 830 1.478510 CTACTAGGCACACTGTCAGGG 59.521 57.143 0.00 0.00 0.00 4.45
843 849 3.746045 TTCGAAAGTTCACTAGGCACT 57.254 42.857 0.00 0.00 46.37 4.40
844 850 4.056050 TCTTTCGAAAGTTCACTAGGCAC 58.944 43.478 31.29 0.00 37.31 5.01
845 851 4.038763 TCTCTTTCGAAAGTTCACTAGGCA 59.961 41.667 31.29 11.94 37.31 4.75
851 857 7.241376 TGTCTTTTTCTCTTTCGAAAGTTCAC 58.759 34.615 31.29 18.93 37.31 3.18
1552 1610 0.686769 AGTAGGGGTTGCGGTAGAGG 60.687 60.000 0.00 0.00 0.00 3.69
1617 1683 3.069289 TCGCCAATGTATCATCTCATGC 58.931 45.455 0.00 0.00 0.00 4.06
1816 1924 1.437986 GCCGGCGATGTAGAAGTCT 59.562 57.895 12.58 0.00 0.00 3.24
1964 2072 2.919387 GCATGCACACACAACTGATGAC 60.919 50.000 14.21 0.00 0.00 3.06
1982 2090 0.881600 TCGCATCGCTTAGCATGCAT 60.882 50.000 27.37 7.68 40.37 3.96
2232 2405 1.376037 CCCTTCCGTCTGGCAGTTC 60.376 63.158 15.27 8.26 34.14 3.01
2361 2534 5.010933 ACGGAGGGAGTAGATACATACATG 58.989 45.833 0.00 0.00 0.00 3.21
2362 2535 5.258216 ACGGAGGGAGTAGATACATACAT 57.742 43.478 0.00 0.00 0.00 2.29
2364 2537 4.458642 GGAACGGAGGGAGTAGATACATAC 59.541 50.000 0.00 0.00 0.00 2.39
2365 2538 4.353191 AGGAACGGAGGGAGTAGATACATA 59.647 45.833 0.00 0.00 0.00 2.29
2366 2539 3.140519 AGGAACGGAGGGAGTAGATACAT 59.859 47.826 0.00 0.00 0.00 2.29
2564 2738 9.807649 AATTTTCATCACTGGCTATAAAACATC 57.192 29.630 0.00 0.00 0.00 3.06
2611 2785 0.889186 ACGTGCCCCTGAAACATGAC 60.889 55.000 0.00 0.00 0.00 3.06
2622 2796 1.289800 GAACGAGAGAAACGTGCCCC 61.290 60.000 0.00 0.00 43.16 5.80
2623 2797 2.151295 GAACGAGAGAAACGTGCCC 58.849 57.895 0.00 0.00 43.16 5.36
2626 2800 0.784778 GCTGGAACGAGAGAAACGTG 59.215 55.000 0.00 0.00 43.16 4.49
2628 2802 0.663568 ACGCTGGAACGAGAGAAACG 60.664 55.000 0.00 0.00 36.70 3.60
3007 3182 0.389296 TCCCACGCGTGTATTCACTG 60.389 55.000 34.81 18.17 41.89 3.66
3054 3486 1.680735 TCAAGGGCAACATGTTGTGAC 59.319 47.619 33.01 24.15 42.31 3.67
3157 3589 9.877178 TCCTTTATTTTGTTGTACACATTTTGT 57.123 25.926 0.00 0.00 42.84 2.83
3257 3940 2.288763 TGTGCACGTATCAAAGCTCTCA 60.289 45.455 13.13 0.00 0.00 3.27
3418 4113 6.700081 TCACCTCAATATGCTAAATACACGAC 59.300 38.462 0.00 0.00 0.00 4.34
3421 4116 8.208718 TGTTCACCTCAATATGCTAAATACAC 57.791 34.615 0.00 0.00 0.00 2.90
3435 4130 4.949856 AGCTTTCTCTTTTGTTCACCTCAA 59.050 37.500 0.00 0.00 0.00 3.02
3456 4151 7.253783 GCTGAGAAGACAAACTTTGTTTTTAGC 60.254 37.037 8.56 14.21 45.52 3.09
3572 4313 9.794719 ACTTTGACTAAAGCTAAAATAAGGACT 57.205 29.630 0.00 0.00 45.72 3.85
3574 4315 9.787435 TGACTTTGACTAAAGCTAAAATAAGGA 57.213 29.630 0.00 0.00 45.72 3.36
3577 4318 9.893305 GCTTGACTTTGACTAAAGCTAAAATAA 57.107 29.630 0.00 0.00 45.72 1.40
3585 4326 6.546972 ACTAAGCTTGACTTTGACTAAAGC 57.453 37.500 9.86 0.00 45.72 3.51
3717 4458 9.545105 TCGTAAAGTTTGACCAAGTTTATAGAA 57.455 29.630 0.00 0.00 40.73 2.10
3718 4459 9.545105 TTCGTAAAGTTTGACCAAGTTTATAGA 57.455 29.630 0.00 4.22 40.73 1.98
3720 4461 9.328845 ACTTCGTAAAGTTTGACCAAGTTTATA 57.671 29.630 0.00 0.00 43.28 0.98
3721 4462 8.217131 ACTTCGTAAAGTTTGACCAAGTTTAT 57.783 30.769 0.00 0.00 43.28 1.40
3763 4729 9.939802 ATGTACTCTCTCCGTTTTTATTTACTT 57.060 29.630 0.00 0.00 0.00 2.24
3799 4822 4.264253 TCCATGCAATTTAGAGGTGACAG 58.736 43.478 0.00 0.00 0.00 3.51
3808 4831 7.601856 TGTCTTAAACCTTCCATGCAATTTAG 58.398 34.615 0.00 0.00 0.00 1.85
3821 4844 6.655425 GCTAAGATGGTCTTGTCTTAAACCTT 59.345 38.462 2.60 0.00 37.29 3.50
3845 4868 7.012704 ACAAATGAGGACATGTATAGTGATTGC 59.987 37.037 0.00 0.00 36.79 3.56
3982 5425 7.687005 TTCATAAACCGTTTGATTTGTTGTC 57.313 32.000 6.77 0.00 0.00 3.18
4007 5450 4.003648 GTGGAACATCGACCTTTCATTCT 58.996 43.478 0.00 0.00 44.52 2.40
4010 5453 3.007940 TGAGTGGAACATCGACCTTTCAT 59.992 43.478 0.00 0.00 44.52 2.57
4011 5454 2.367241 TGAGTGGAACATCGACCTTTCA 59.633 45.455 0.00 0.00 44.52 2.69
4043 5486 3.129871 CGCTGAAAATGGGCAAGAAAAA 58.870 40.909 0.00 0.00 0.00 1.94
4162 6122 4.854291 GTGCTACGATCTAGTATGATGCAC 59.146 45.833 12.01 12.01 37.65 4.57
4189 6310 8.565896 TTTTAGTTTCATGCATGAGTATCTGT 57.434 30.769 27.25 12.63 38.19 3.41
4200 6321 7.144722 AGATCGTTGATTTTAGTTTCATGCA 57.855 32.000 0.00 0.00 0.00 3.96
4209 6330 4.266945 GCTGCGAAGATCGTTGATTTTAG 58.733 43.478 0.00 0.00 42.81 1.85
4211 6332 2.474526 CGCTGCGAAGATCGTTGATTTT 60.475 45.455 18.66 0.00 42.81 1.82
4214 6335 1.148157 CCGCTGCGAAGATCGTTGAT 61.148 55.000 25.45 0.00 42.81 2.57
4215 6336 1.805539 CCGCTGCGAAGATCGTTGA 60.806 57.895 25.45 0.00 42.81 3.18
4216 6337 1.746727 CTCCGCTGCGAAGATCGTTG 61.747 60.000 25.45 2.99 42.81 4.10
4217 6338 1.517257 CTCCGCTGCGAAGATCGTT 60.517 57.895 25.45 0.00 42.81 3.85
4218 6339 2.103143 CTCCGCTGCGAAGATCGT 59.897 61.111 25.45 0.00 42.81 3.73
4219 6340 1.941734 GTCTCCGCTGCGAAGATCG 60.942 63.158 25.45 5.42 43.89 3.69
4261 6382 1.271840 TGATGGAGTACCTGGTGGCC 61.272 60.000 10.23 8.45 36.63 5.36
4348 6469 0.930726 TTCCATTAAGGCGGGGGATT 59.069 50.000 0.00 0.00 37.29 3.01
4379 6500 1.757682 TTTTTGTCGGGCTCAACAGT 58.242 45.000 0.00 0.00 0.00 3.55
4455 6707 1.760875 GTATCCGCCCACCTCTCCA 60.761 63.158 0.00 0.00 0.00 3.86
4617 6869 0.264359 CCATCTCCCTGACTCCCTCT 59.736 60.000 0.00 0.00 0.00 3.69
4619 6871 1.383803 GCCATCTCCCTGACTCCCT 60.384 63.158 0.00 0.00 0.00 4.20
4620 6872 1.690633 TGCCATCTCCCTGACTCCC 60.691 63.158 0.00 0.00 0.00 4.30
4621 6873 0.689080 TCTGCCATCTCCCTGACTCC 60.689 60.000 0.00 0.00 0.00 3.85
4622 6874 1.070445 CATCTGCCATCTCCCTGACTC 59.930 57.143 0.00 0.00 0.00 3.36
4623 6875 1.129917 CATCTGCCATCTCCCTGACT 58.870 55.000 0.00 0.00 0.00 3.41
4624 6876 0.108207 CCATCTGCCATCTCCCTGAC 59.892 60.000 0.00 0.00 0.00 3.51
4625 6877 0.326904 ACCATCTGCCATCTCCCTGA 60.327 55.000 0.00 0.00 0.00 3.86
4626 6878 1.347050 CTACCATCTGCCATCTCCCTG 59.653 57.143 0.00 0.00 0.00 4.45
4630 6882 4.827835 TGTACTACTACCATCTGCCATCTC 59.172 45.833 0.00 0.00 0.00 2.75
4636 6888 3.797184 GCTGCTGTACTACTACCATCTGC 60.797 52.174 0.00 0.00 0.00 4.26
4644 6896 1.822990 GGTGGTGCTGCTGTACTACTA 59.177 52.381 22.32 2.58 39.45 1.82
4741 6997 9.211485 GGAGTAGCACTATTTTGTACTGTAAAA 57.789 33.333 0.00 0.00 0.00 1.52
4742 6998 8.591072 AGGAGTAGCACTATTTTGTACTGTAAA 58.409 33.333 0.00 0.00 0.00 2.01
4743 6999 8.130671 AGGAGTAGCACTATTTTGTACTGTAA 57.869 34.615 0.00 0.00 0.00 2.41
4744 7000 7.713734 AGGAGTAGCACTATTTTGTACTGTA 57.286 36.000 0.00 0.00 0.00 2.74
4745 7001 6.607004 AGGAGTAGCACTATTTTGTACTGT 57.393 37.500 0.00 0.00 0.00 3.55
4746 7002 7.544622 TGTAGGAGTAGCACTATTTTGTACTG 58.455 38.462 0.00 0.00 0.00 2.74
4747 7003 7.713734 TGTAGGAGTAGCACTATTTTGTACT 57.286 36.000 0.00 0.00 0.00 2.73
4748 7004 8.248945 TCTTGTAGGAGTAGCACTATTTTGTAC 58.751 37.037 0.00 0.00 0.00 2.90
4749 7005 8.357290 TCTTGTAGGAGTAGCACTATTTTGTA 57.643 34.615 0.00 0.00 0.00 2.41
4750 7006 7.241042 TCTTGTAGGAGTAGCACTATTTTGT 57.759 36.000 0.00 0.00 0.00 2.83
4751 7007 8.547967 TTTCTTGTAGGAGTAGCACTATTTTG 57.452 34.615 0.00 0.00 0.00 2.44
4755 7011 8.145122 GCTTATTTCTTGTAGGAGTAGCACTAT 58.855 37.037 0.00 0.00 0.00 2.12
4756 7012 7.123697 TGCTTATTTCTTGTAGGAGTAGCACTA 59.876 37.037 0.00 0.00 0.00 2.74
4757 7013 6.070767 TGCTTATTTCTTGTAGGAGTAGCACT 60.071 38.462 0.00 0.00 0.00 4.40
4758 7014 6.106673 TGCTTATTTCTTGTAGGAGTAGCAC 58.893 40.000 0.00 0.00 0.00 4.40
4759 7015 6.294361 TGCTTATTTCTTGTAGGAGTAGCA 57.706 37.500 0.00 0.00 0.00 3.49
4760 7016 7.611213 TTTGCTTATTTCTTGTAGGAGTAGC 57.389 36.000 0.00 0.00 0.00 3.58
4761 7017 8.451748 GGTTTTGCTTATTTCTTGTAGGAGTAG 58.548 37.037 0.00 0.00 0.00 2.57
4762 7018 7.392393 GGGTTTTGCTTATTTCTTGTAGGAGTA 59.608 37.037 0.00 0.00 0.00 2.59
4763 7019 6.208797 GGGTTTTGCTTATTTCTTGTAGGAGT 59.791 38.462 0.00 0.00 0.00 3.85
4764 7020 6.434340 AGGGTTTTGCTTATTTCTTGTAGGAG 59.566 38.462 0.00 0.00 0.00 3.69
4765 7021 6.208599 CAGGGTTTTGCTTATTTCTTGTAGGA 59.791 38.462 0.00 0.00 0.00 2.94
4766 7022 6.389906 CAGGGTTTTGCTTATTTCTTGTAGG 58.610 40.000 0.00 0.00 0.00 3.18
4767 7023 6.389906 CCAGGGTTTTGCTTATTTCTTGTAG 58.610 40.000 0.00 0.00 0.00 2.74
4768 7024 5.245075 CCCAGGGTTTTGCTTATTTCTTGTA 59.755 40.000 0.00 0.00 0.00 2.41
4769 7025 4.040339 CCCAGGGTTTTGCTTATTTCTTGT 59.960 41.667 0.00 0.00 0.00 3.16
4770 7026 4.283212 TCCCAGGGTTTTGCTTATTTCTTG 59.717 41.667 5.01 0.00 0.00 3.02
4771 7027 4.488770 TCCCAGGGTTTTGCTTATTTCTT 58.511 39.130 5.01 0.00 0.00 2.52
4772 7028 4.126520 TCCCAGGGTTTTGCTTATTTCT 57.873 40.909 5.01 0.00 0.00 2.52
4773 7029 4.466015 TGATCCCAGGGTTTTGCTTATTTC 59.534 41.667 5.01 0.00 0.00 2.17
4774 7030 4.424842 TGATCCCAGGGTTTTGCTTATTT 58.575 39.130 5.01 0.00 0.00 1.40
4775 7031 4.026052 CTGATCCCAGGGTTTTGCTTATT 58.974 43.478 5.01 0.00 36.77 1.40
4776 7032 3.635591 CTGATCCCAGGGTTTTGCTTAT 58.364 45.455 5.01 0.00 36.77 1.73
4777 7033 3.085952 CTGATCCCAGGGTTTTGCTTA 57.914 47.619 5.01 0.00 36.77 3.09
4778 7034 1.928868 CTGATCCCAGGGTTTTGCTT 58.071 50.000 5.01 0.00 36.77 3.91
4779 7035 3.677963 CTGATCCCAGGGTTTTGCT 57.322 52.632 5.01 0.00 36.77 3.91
4791 7047 2.408050 GTACGTCATCATGCCTGATCC 58.592 52.381 0.96 0.00 40.20 3.36
4795 7051 2.315925 AAGGTACGTCATCATGCCTG 57.684 50.000 0.00 0.00 0.00 4.85
4796 7052 3.031736 AGTAAGGTACGTCATCATGCCT 58.968 45.455 0.00 0.00 0.00 4.75
4810 7439 8.605325 ACCATAGATAGTGTACAAAGTAAGGT 57.395 34.615 0.00 0.00 0.00 3.50
4849 7489 1.269569 CCTTTCACCCCGCAAAAGAAC 60.270 52.381 0.00 0.00 32.89 3.01
4852 7492 0.825840 TCCCTTTCACCCCGCAAAAG 60.826 55.000 0.00 0.00 0.00 2.27
4928 7568 3.833070 AGTATGGTCGAACTTGAGTCCTT 59.167 43.478 0.33 0.00 0.00 3.36
4936 7576 3.257375 TGTACTGCAGTATGGTCGAACTT 59.743 43.478 28.37 0.00 35.86 2.66
4942 7582 3.926616 AGTGTTGTACTGCAGTATGGTC 58.073 45.455 28.37 16.27 38.49 4.02
5107 7781 2.019249 CATGCTGGTGATCGTCCAATT 58.981 47.619 10.04 0.00 34.35 2.32
5122 7796 3.119245 GCCATTCAACATTCAGACATGCT 60.119 43.478 0.00 0.00 0.00 3.79
5362 8052 0.689623 GCCAATCTCGGAGGATGGAT 59.310 55.000 24.79 3.16 0.00 3.41
5492 8182 6.308282 GGCAGCTACGTAATGATATTACTCAC 59.692 42.308 10.76 0.00 0.00 3.51
5573 8285 7.277981 GCAATCATGAAATTGATCTTGCTTCTT 59.722 33.333 15.66 0.00 38.05 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.