Multiple sequence alignment - TraesCS2A01G130200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G130200 chr2A 100.000 4866 0 0 1 4866 77937632 77942497 0.000000e+00 8986.0
1 TraesCS2A01G130200 chr2A 89.531 640 43 12 1077 1716 441102329 441102944 0.000000e+00 789.0
2 TraesCS2A01G130200 chr2A 87.225 454 57 1 4412 4864 773290671 773291124 2.600000e-142 516.0
3 TraesCS2A01G130200 chr2D 90.649 4502 268 70 1 4409 77128530 77132971 0.000000e+00 5840.0
4 TraesCS2A01G130200 chr2D 89.185 638 39 18 1077 1711 645271975 645271365 0.000000e+00 769.0
5 TraesCS2A01G130200 chr2D 87.284 464 55 4 4404 4866 645585841 645585381 1.200000e-145 527.0
6 TraesCS2A01G130200 chr2B 90.549 4116 238 78 350 4409 118862644 118866664 0.000000e+00 5306.0
7 TraesCS2A01G130200 chr2B 90.202 643 33 18 1077 1716 657483553 657482938 0.000000e+00 811.0
8 TraesCS2A01G130200 chr2B 87.500 272 31 3 24 295 118851956 118852224 1.320000e-80 311.0
9 TraesCS2A01G130200 chr6B 89.891 643 35 18 1077 1716 151882968 151883583 0.000000e+00 800.0
10 TraesCS2A01G130200 chr6B 89.114 643 40 18 1077 1716 80799311 80799926 0.000000e+00 773.0
11 TraesCS2A01G130200 chr6D 89.688 640 42 15 1077 1716 119814221 119813606 0.000000e+00 795.0
12 TraesCS2A01G130200 chr7B 89.704 641 38 18 1077 1716 606368121 606368734 0.000000e+00 793.0
13 TraesCS2A01G130200 chr7B 87.736 636 46 18 1085 1716 472918789 472918182 0.000000e+00 713.0
14 TraesCS2A01G130200 chr3A 89.375 640 44 12 1077 1716 58067802 58068417 0.000000e+00 784.0
15 TraesCS2A01G130200 chr5B 89.114 643 40 16 1077 1716 535102291 535101676 0.000000e+00 773.0
16 TraesCS2A01G130200 chr7A 87.950 639 45 19 1082 1716 107679308 107679918 0.000000e+00 725.0
17 TraesCS2A01G130200 chr5D 84.783 92 13 1 390 481 189170429 189170339 1.870000e-14 91.6
18 TraesCS2A01G130200 chr7D 81.928 83 13 2 511 591 520391346 520391428 8.740000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G130200 chr2A 77937632 77942497 4865 False 8986 8986 100.000 1 4866 1 chr2A.!!$F1 4865
1 TraesCS2A01G130200 chr2A 441102329 441102944 615 False 789 789 89.531 1077 1716 1 chr2A.!!$F2 639
2 TraesCS2A01G130200 chr2D 77128530 77132971 4441 False 5840 5840 90.649 1 4409 1 chr2D.!!$F1 4408
3 TraesCS2A01G130200 chr2D 645271365 645271975 610 True 769 769 89.185 1077 1711 1 chr2D.!!$R1 634
4 TraesCS2A01G130200 chr2B 118862644 118866664 4020 False 5306 5306 90.549 350 4409 1 chr2B.!!$F2 4059
5 TraesCS2A01G130200 chr2B 657482938 657483553 615 True 811 811 90.202 1077 1716 1 chr2B.!!$R1 639
6 TraesCS2A01G130200 chr6B 151882968 151883583 615 False 800 800 89.891 1077 1716 1 chr6B.!!$F2 639
7 TraesCS2A01G130200 chr6B 80799311 80799926 615 False 773 773 89.114 1077 1716 1 chr6B.!!$F1 639
8 TraesCS2A01G130200 chr6D 119813606 119814221 615 True 795 795 89.688 1077 1716 1 chr6D.!!$R1 639
9 TraesCS2A01G130200 chr7B 606368121 606368734 613 False 793 793 89.704 1077 1716 1 chr7B.!!$F1 639
10 TraesCS2A01G130200 chr7B 472918182 472918789 607 True 713 713 87.736 1085 1716 1 chr7B.!!$R1 631
11 TraesCS2A01G130200 chr3A 58067802 58068417 615 False 784 784 89.375 1077 1716 1 chr3A.!!$F1 639
12 TraesCS2A01G130200 chr5B 535101676 535102291 615 True 773 773 89.114 1077 1716 1 chr5B.!!$R1 639
13 TraesCS2A01G130200 chr7A 107679308 107679918 610 False 725 725 87.950 1082 1716 1 chr7A.!!$F1 634

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
212 213 0.036105 TGTAGAGGCGGTGTCGAGTA 60.036 55.0 0.00 0.00 39.00 2.59 F
1369 1416 0.813821 GGAGGCCTGCATGTTTTCTC 59.186 55.0 20.97 0.00 0.00 2.87 F
2992 3124 0.623194 TATGTTTGCTAGGCCTGGCA 59.377 50.0 37.21 37.21 45.39 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2159 2248 1.343069 AATATCCCTCCCTCTGCGTC 58.657 55.0 0.00 0.00 0.0 5.19 R
3299 3431 0.390492 GGCTTTTCTGCTGCAACCTT 59.610 50.0 3.02 0.00 0.0 3.50 R
4439 4603 0.035247 AAATGCCCGGCCGTAGTTAA 60.035 50.0 26.12 3.35 0.0 2.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 1.039233 TACCGGGACCTTTCTAGCCG 61.039 60.000 6.32 0.00 0.00 5.52
45 46 2.056223 CCGGGACCTTTCTAGCCGA 61.056 63.158 0.00 0.00 29.24 5.54
73 74 2.572284 GTCGTCCAACCCTCTCCG 59.428 66.667 0.00 0.00 0.00 4.63
87 88 2.482142 CCTCTCCGCCACATTCTTCTAC 60.482 54.545 0.00 0.00 0.00 2.59
89 90 1.134367 CTCCGCCACATTCTTCTACGA 59.866 52.381 0.00 0.00 0.00 3.43
108 109 5.362556 ACGAGACAATGATTTGTTTCCTG 57.637 39.130 0.00 0.00 46.01 3.86
127 128 4.215399 TCCTGTTTTAGATGTCTTTTGGCG 59.785 41.667 0.00 0.00 0.00 5.69
130 131 4.576873 TGTTTTAGATGTCTTTTGGCGTCA 59.423 37.500 0.00 0.00 42.23 4.35
150 151 0.802607 CGTGAAGACTTCCTAGCCGC 60.803 60.000 12.66 0.00 0.00 6.53
156 157 0.878086 GACTTCCTAGCCGCTGCATC 60.878 60.000 2.16 0.00 41.13 3.91
157 158 1.144716 CTTCCTAGCCGCTGCATCA 59.855 57.895 2.16 0.00 41.13 3.07
158 159 0.462581 CTTCCTAGCCGCTGCATCAA 60.463 55.000 2.16 0.00 41.13 2.57
159 160 0.744414 TTCCTAGCCGCTGCATCAAC 60.744 55.000 2.16 0.00 41.13 3.18
166 167 1.342555 CCGCTGCATCAACAATGTTG 58.657 50.000 19.23 19.23 37.71 3.33
188 189 4.443063 TGTTCTGACTTCGACAATGTTACG 59.557 41.667 0.00 0.00 0.00 3.18
189 190 4.492791 TCTGACTTCGACAATGTTACGA 57.507 40.909 0.00 0.00 0.00 3.43
212 213 0.036105 TGTAGAGGCGGTGTCGAGTA 60.036 55.000 0.00 0.00 39.00 2.59
222 223 1.679641 TGTCGAGTATGGCCCACGA 60.680 57.895 0.00 0.00 0.00 4.35
234 235 0.947180 GCCCACGACACAACACGTAT 60.947 55.000 0.00 0.00 40.76 3.06
281 286 1.553690 CCATGTCCTCAAGTCCCCGT 61.554 60.000 0.00 0.00 0.00 5.28
284 289 1.004918 GTCCTCAAGTCCCCGTGTG 60.005 63.158 0.00 0.00 0.00 3.82
325 330 6.499106 AAAGATGAATTTGAAGGGTTGGTT 57.501 33.333 0.00 0.00 0.00 3.67
328 333 5.602145 AGATGAATTTGAAGGGTTGGTTGAA 59.398 36.000 0.00 0.00 0.00 2.69
330 335 5.852827 TGAATTTGAAGGGTTGGTTGAATC 58.147 37.500 0.00 0.00 0.00 2.52
331 336 4.519540 ATTTGAAGGGTTGGTTGAATCG 57.480 40.909 0.00 0.00 0.00 3.34
332 337 2.649531 TGAAGGGTTGGTTGAATCGT 57.350 45.000 0.00 0.00 0.00 3.73
333 338 2.938838 TGAAGGGTTGGTTGAATCGTT 58.061 42.857 0.00 0.00 0.00 3.85
334 339 2.621055 TGAAGGGTTGGTTGAATCGTTG 59.379 45.455 0.00 0.00 0.00 4.10
335 340 1.616159 AGGGTTGGTTGAATCGTTGG 58.384 50.000 0.00 0.00 0.00 3.77
336 341 1.133606 AGGGTTGGTTGAATCGTTGGT 60.134 47.619 0.00 0.00 0.00 3.67
337 342 1.268625 GGGTTGGTTGAATCGTTGGTC 59.731 52.381 0.00 0.00 0.00 4.02
338 343 1.950909 GGTTGGTTGAATCGTTGGTCA 59.049 47.619 0.00 0.00 0.00 4.02
341 358 4.500716 GGTTGGTTGAATCGTTGGTCATTT 60.501 41.667 0.00 0.00 0.00 2.32
433 450 6.924060 ACGGACTGCATATAGACTAAATTGAC 59.076 38.462 0.00 0.00 0.00 3.18
565 584 5.234972 TGCATAATGACTGAAGCGTGAATAG 59.765 40.000 0.00 0.00 0.00 1.73
675 706 4.935352 ACCTGTGTGTGTAAAATGCAAT 57.065 36.364 0.00 0.00 0.00 3.56
677 708 4.340666 ACCTGTGTGTGTAAAATGCAATGA 59.659 37.500 0.00 0.00 0.00 2.57
708 739 1.539157 GCCCAAAAGAGTCCCTGAAG 58.461 55.000 0.00 0.00 0.00 3.02
857 888 1.891919 ATCACACCCACACACACGC 60.892 57.895 0.00 0.00 0.00 5.34
858 889 2.601194 ATCACACCCACACACACGCA 62.601 55.000 0.00 0.00 0.00 5.24
859 890 2.822255 ACACCCACACACACGCAC 60.822 61.111 0.00 0.00 0.00 5.34
860 891 3.935872 CACCCACACACACGCACG 61.936 66.667 0.00 0.00 0.00 5.34
942 979 2.032681 GCCACCACCACCTGAGAC 59.967 66.667 0.00 0.00 0.00 3.36
952 989 4.504916 CCTGAGACTCTGGCGCCG 62.505 72.222 23.90 16.91 0.00 6.46
1327 1374 1.345176 GTTTGCTCCGCTCGATTCG 59.655 57.895 0.00 0.00 0.00 3.34
1369 1416 0.813821 GGAGGCCTGCATGTTTTCTC 59.186 55.000 20.97 0.00 0.00 2.87
1429 1476 1.267261 GATCTGATCCGTACTCCCGTG 59.733 57.143 6.37 0.00 0.00 4.94
1510 1565 2.229784 CCTGCTGTTCATTTCTGGGTTC 59.770 50.000 0.00 0.00 0.00 3.62
1521 1576 5.710099 TCATTTCTGGGTTCTGTGGATTTAC 59.290 40.000 0.00 0.00 0.00 2.01
1525 1580 3.670625 TGGGTTCTGTGGATTTACTTCG 58.329 45.455 0.00 0.00 0.00 3.79
1551 1607 7.416817 CCATGCATGACGAATTACTGATAAAA 58.583 34.615 28.31 0.00 0.00 1.52
1552 1608 7.914871 CCATGCATGACGAATTACTGATAAAAA 59.085 33.333 28.31 0.00 0.00 1.94
1574 1630 7.946381 AAAATCTCCCTTTCCTCTGTTAATC 57.054 36.000 0.00 0.00 0.00 1.75
1598 1657 2.282290 GCATGCATGCGGTTTGATTAAC 59.718 45.455 33.99 6.15 44.67 2.01
1619 1678 3.638160 ACATGGCTTGTGTTCTGAATGTT 59.362 39.130 5.09 0.00 37.11 2.71
1620 1679 4.826733 ACATGGCTTGTGTTCTGAATGTTA 59.173 37.500 5.09 0.00 37.11 2.41
1621 1680 5.301551 ACATGGCTTGTGTTCTGAATGTTAA 59.698 36.000 5.09 0.00 37.11 2.01
1622 1681 6.015180 ACATGGCTTGTGTTCTGAATGTTAAT 60.015 34.615 5.09 0.00 37.11 1.40
1623 1682 7.176515 ACATGGCTTGTGTTCTGAATGTTAATA 59.823 33.333 5.09 0.00 37.11 0.98
1624 1683 6.908825 TGGCTTGTGTTCTGAATGTTAATAC 58.091 36.000 0.00 0.00 0.00 1.89
1625 1684 6.714810 TGGCTTGTGTTCTGAATGTTAATACT 59.285 34.615 0.00 0.00 0.00 2.12
1626 1685 7.230510 TGGCTTGTGTTCTGAATGTTAATACTT 59.769 33.333 0.00 0.00 0.00 2.24
1627 1686 7.538678 GGCTTGTGTTCTGAATGTTAATACTTG 59.461 37.037 0.00 0.00 0.00 3.16
1628 1687 8.076178 GCTTGTGTTCTGAATGTTAATACTTGT 58.924 33.333 0.00 0.00 0.00 3.16
1629 1688 9.385902 CTTGTGTTCTGAATGTTAATACTTGTG 57.614 33.333 0.00 0.00 0.00 3.33
1630 1689 8.445275 TGTGTTCTGAATGTTAATACTTGTGT 57.555 30.769 0.00 0.00 0.00 3.72
1631 1690 8.898761 TGTGTTCTGAATGTTAATACTTGTGTT 58.101 29.630 0.00 0.00 0.00 3.32
1632 1691 9.382244 GTGTTCTGAATGTTAATACTTGTGTTC 57.618 33.333 0.00 0.00 0.00 3.18
1633 1692 9.337396 TGTTCTGAATGTTAATACTTGTGTTCT 57.663 29.630 0.00 0.00 0.00 3.01
1634 1693 9.599322 GTTCTGAATGTTAATACTTGTGTTCTG 57.401 33.333 0.00 0.00 0.00 3.02
1635 1694 9.554395 TTCTGAATGTTAATACTTGTGTTCTGA 57.446 29.630 0.00 0.00 0.00 3.27
1636 1695 9.554395 TCTGAATGTTAATACTTGTGTTCTGAA 57.446 29.630 0.00 0.00 0.00 3.02
1761 1841 1.269723 CAGATCGCGGCTTAGGTATGA 59.730 52.381 6.13 0.00 0.00 2.15
1784 1864 2.561478 TTACCTTTGGACTGTCCTGC 57.439 50.000 26.03 2.07 37.46 4.85
1823 1908 5.666969 TTGGATTTGATTTCGCTATACGG 57.333 39.130 0.00 0.00 43.89 4.02
1832 1917 6.615088 TGATTTCGCTATACGGGTATCTTAC 58.385 40.000 0.00 0.00 43.89 2.34
1833 1918 6.432162 TGATTTCGCTATACGGGTATCTTACT 59.568 38.462 0.00 0.00 43.89 2.24
1834 1919 7.607607 TGATTTCGCTATACGGGTATCTTACTA 59.392 37.037 0.00 0.00 43.89 1.82
1835 1920 7.744087 TTTCGCTATACGGGTATCTTACTAA 57.256 36.000 0.00 0.00 43.89 2.24
1858 1943 4.458295 AGATGGCTCTGTCTGATTTTGTTG 59.542 41.667 0.00 0.00 0.00 3.33
1867 1954 4.082300 TGTCTGATTTTGTTGTTGTGCACT 60.082 37.500 19.41 0.00 0.00 4.40
1868 1955 4.500477 GTCTGATTTTGTTGTTGTGCACTC 59.500 41.667 19.41 11.68 0.00 3.51
1916 2003 2.154462 GACGGGGATATTCTTGCCATG 58.846 52.381 0.00 0.00 0.00 3.66
2091 2180 5.032327 ACCGGAGTTAATTATCCCTCAAC 57.968 43.478 9.46 0.00 31.43 3.18
2159 2248 6.049955 TCCATAAGTAAAGTTCTCACCAGG 57.950 41.667 0.00 0.00 0.00 4.45
2173 2262 3.465403 CAGGACGCAGAGGGAGGG 61.465 72.222 0.00 0.00 0.00 4.30
2192 2281 3.698040 AGGGATATTTGCAAGAACAGCTG 59.302 43.478 13.48 13.48 0.00 4.24
2208 2297 7.441017 AGAACAGCTGTGAGGATTCTATAATC 58.559 38.462 22.49 8.71 40.77 1.75
2348 2437 4.675063 AGAACAATTGTGGGGTAGGAAT 57.325 40.909 12.82 0.00 0.00 3.01
2533 2624 4.260948 GGAGACAAATCTGAATGGAATCGC 60.261 45.833 0.00 0.00 34.34 4.58
2566 2657 8.039603 TGATTTTCGCAACATATATATGGACC 57.960 34.615 23.44 11.52 38.00 4.46
2567 2658 7.663493 TGATTTTCGCAACATATATATGGACCA 59.337 33.333 23.44 0.00 38.00 4.02
2569 2660 5.476091 TCGCAACATATATATGGACCACA 57.524 39.130 23.44 0.00 38.00 4.17
2600 2691 7.331791 AGGTAGTACTGGTGATTTGATTCTTC 58.668 38.462 5.39 0.00 0.00 2.87
2618 2709 8.321353 TGATTCTTCTGTTTCTTATCAGCCTTA 58.679 33.333 0.00 0.00 0.00 2.69
2619 2710 9.167311 GATTCTTCTGTTTCTTATCAGCCTTAA 57.833 33.333 0.00 0.00 0.00 1.85
2620 2711 9.692325 ATTCTTCTGTTTCTTATCAGCCTTAAT 57.308 29.630 0.00 0.00 0.00 1.40
2637 2737 2.222227 AATTCCTTGGAACCTGGAGC 57.778 50.000 0.00 0.00 0.00 4.70
2650 2750 2.433604 ACCTGGAGCTATCATGTCACAG 59.566 50.000 0.00 0.00 0.00 3.66
2700 2823 8.798153 CCTTTTAGTACAAATTTGCGATTCATC 58.202 33.333 18.12 0.80 0.00 2.92
2716 2839 6.558009 CGATTCATCCAGTCAAACATTTCAT 58.442 36.000 0.00 0.00 0.00 2.57
2717 2840 6.471198 CGATTCATCCAGTCAAACATTTCATG 59.529 38.462 0.00 0.00 0.00 3.07
2747 2870 9.044150 ACATTTCATGTTAACATTTCAAACCTG 57.956 29.630 18.50 14.16 41.63 4.00
2748 2871 9.044150 CATTTCATGTTAACATTTCAAACCTGT 57.956 29.630 18.50 1.58 33.61 4.00
2749 2872 9.612066 ATTTCATGTTAACATTTCAAACCTGTT 57.388 25.926 18.50 1.27 37.00 3.16
2787 2910 6.038603 GCTGCATGGACTAATGTTTCTCAATA 59.961 38.462 0.00 0.00 0.00 1.90
2791 2914 8.844244 GCATGGACTAATGTTTCTCAATATCTT 58.156 33.333 0.00 0.00 0.00 2.40
2862 2985 4.662468 TCTACAGGCTGCTCAGATTTAG 57.338 45.455 15.89 6.30 0.00 1.85
2922 3045 9.712305 CTGAGAAGGTAAGAGAAAATCTGTAAA 57.288 33.333 0.00 0.00 38.67 2.01
2967 3099 7.888021 TCCTATTGTATGTTTGACCTCACAAAT 59.112 33.333 0.00 0.00 40.91 2.32
2992 3124 0.623194 TATGTTTGCTAGGCCTGGCA 59.377 50.000 37.21 37.21 45.39 4.92
3008 3140 1.028868 GGCAGCTCATTGACCCTGAC 61.029 60.000 11.75 6.69 0.00 3.51
3023 3155 5.353123 TGACCCTGACGCTAAATATGTTTTC 59.647 40.000 0.00 0.00 0.00 2.29
3086 3218 2.027625 CTTTGACACCCGTCTCCGC 61.028 63.158 0.00 0.00 43.06 5.54
3110 3242 3.573967 CACTTTTACAGGCCCTGAATTGT 59.426 43.478 19.90 6.55 35.18 2.71
3222 3354 2.427812 GACCCTGTAGCTACTGTCCTTC 59.572 54.545 23.84 12.17 0.00 3.46
3236 3368 8.351461 GCTACTGTCCTTCGTATCTATAAGTTT 58.649 37.037 0.00 0.00 0.00 2.66
3595 3729 9.052759 CAGTGTAGTTGGGATTAATTATACACC 57.947 37.037 13.97 4.44 41.53 4.16
3596 3730 8.999895 AGTGTAGTTGGGATTAATTATACACCT 58.000 33.333 13.97 1.90 41.53 4.00
3680 3818 7.281040 TGTATTACAGATTACTCGGTTAGGG 57.719 40.000 0.00 0.00 31.88 3.53
3772 3910 4.581824 TCCCTTTTCATATCAGCTGCAATC 59.418 41.667 9.47 0.00 0.00 2.67
3800 3938 7.994911 TCAGAAATTATATGGTTGCTCACATCT 59.005 33.333 0.00 0.00 0.00 2.90
3876 4014 0.944386 AATATGTGATTCGCCACGCC 59.056 50.000 0.00 0.00 39.80 5.68
3904 4042 1.670791 AGCAGACTCTACTACGCCTC 58.329 55.000 0.00 0.00 0.00 4.70
3905 4043 1.210967 AGCAGACTCTACTACGCCTCT 59.789 52.381 0.00 0.00 0.00 3.69
3906 4044 1.332375 GCAGACTCTACTACGCCTCTG 59.668 57.143 0.00 0.00 0.00 3.35
3910 4048 1.025812 CTCTACTACGCCTCTGGTGG 58.974 60.000 2.14 0.00 37.55 4.61
3911 4049 0.330604 TCTACTACGCCTCTGGTGGT 59.669 55.000 2.14 0.00 37.55 4.16
3912 4050 0.739561 CTACTACGCCTCTGGTGGTC 59.260 60.000 2.14 0.00 37.55 4.02
3913 4051 0.038599 TACTACGCCTCTGGTGGTCA 59.961 55.000 2.14 0.00 37.55 4.02
3914 4052 0.614979 ACTACGCCTCTGGTGGTCAT 60.615 55.000 2.14 0.00 37.55 3.06
3916 4054 0.613572 TACGCCTCTGGTGGTCATGA 60.614 55.000 0.00 0.00 37.55 3.07
3926 4066 2.355193 TGGTCATGACGGATCGCCA 61.355 57.895 19.33 7.29 0.00 5.69
4006 4148 1.073284 TGGGAGGTGGTGCTTAGTTTC 59.927 52.381 0.00 0.00 0.00 2.78
4117 4259 2.158769 TGATGGCAGTGTCTCTTTGTGT 60.159 45.455 0.00 0.00 0.00 3.72
4133 4276 3.517296 TGTGTCAGGCCTTAATTTCCA 57.483 42.857 0.00 0.00 0.00 3.53
4192 4335 4.460948 AGCGAACTCGATTTACCCTTTA 57.539 40.909 2.69 0.00 43.02 1.85
4193 4336 4.824289 AGCGAACTCGATTTACCCTTTAA 58.176 39.130 2.69 0.00 43.02 1.52
4225 4368 1.136141 CGTGTGCTCTGAAATCTGTGC 60.136 52.381 7.22 7.22 35.70 4.57
4295 4458 3.242867 TCTGAGGGTATTGCCTCCATAG 58.757 50.000 0.00 0.00 37.43 2.23
4332 4495 1.623811 ACGTGTGAATGCTTCCTAGGT 59.376 47.619 9.08 0.00 0.00 3.08
4338 4501 2.771943 TGAATGCTTCCTAGGTACCCAG 59.228 50.000 8.74 3.86 0.00 4.45
4354 4518 0.404040 CCAGCCCCCTTTGAACTGTA 59.596 55.000 0.00 0.00 0.00 2.74
4358 4522 2.445525 AGCCCCCTTTGAACTGTAGAAA 59.554 45.455 0.00 0.00 0.00 2.52
4399 4563 0.030638 GCAGAAAAGCAGCGGTGAAA 59.969 50.000 20.69 0.00 0.00 2.69
4402 4566 1.748493 AGAAAAGCAGCGGTGAAAACA 59.252 42.857 20.69 0.00 0.00 2.83
4409 4573 2.670905 GCAGCGGTGAAAACAAACTTTT 59.329 40.909 20.69 0.00 0.00 2.27
4410 4574 3.241963 GCAGCGGTGAAAACAAACTTTTC 60.242 43.478 20.69 0.00 38.51 2.29
4411 4575 4.173256 CAGCGGTGAAAACAAACTTTTCT 58.827 39.130 9.50 0.00 38.75 2.52
4412 4576 4.625311 CAGCGGTGAAAACAAACTTTTCTT 59.375 37.500 9.50 0.00 38.75 2.52
4413 4577 5.120053 CAGCGGTGAAAACAAACTTTTCTTT 59.880 36.000 9.50 0.00 38.75 2.52
4414 4578 5.699001 AGCGGTGAAAACAAACTTTTCTTTT 59.301 32.000 7.00 0.00 38.75 2.27
4415 4579 5.788041 GCGGTGAAAACAAACTTTTCTTTTG 59.212 36.000 7.00 0.00 38.75 2.44
4416 4580 6.346999 GCGGTGAAAACAAACTTTTCTTTTGA 60.347 34.615 1.97 0.00 38.75 2.69
4417 4581 7.568433 CGGTGAAAACAAACTTTTCTTTTGAA 58.432 30.769 1.97 0.00 38.75 2.69
4418 4582 7.739911 CGGTGAAAACAAACTTTTCTTTTGAAG 59.260 33.333 1.97 0.00 39.88 3.02
4419 4583 8.015087 GGTGAAAACAAACTTTTCTTTTGAAGG 58.985 33.333 1.97 0.00 39.88 3.46
4420 4584 7.533900 GTGAAAACAAACTTTTCTTTTGAAGGC 59.466 33.333 1.97 0.00 39.88 4.35
4421 4585 7.227512 TGAAAACAAACTTTTCTTTTGAAGGCA 59.772 29.630 1.97 0.00 39.88 4.75
4422 4586 7.503521 AAACAAACTTTTCTTTTGAAGGCAA 57.496 28.000 1.97 0.00 39.88 4.52
4423 4587 7.503521 AACAAACTTTTCTTTTGAAGGCAAA 57.496 28.000 1.97 0.00 41.97 3.68
4425 4589 7.359595 ACAAACTTTTCTTTTGAAGGCAAAAC 58.640 30.769 1.97 0.00 46.09 2.43
4426 4590 7.012799 ACAAACTTTTCTTTTGAAGGCAAAACA 59.987 29.630 1.97 0.00 46.09 2.83
4427 4591 7.686438 AACTTTTCTTTTGAAGGCAAAACAT 57.314 28.000 0.00 0.00 46.09 2.71
4428 4592 8.785329 AACTTTTCTTTTGAAGGCAAAACATA 57.215 26.923 0.00 0.00 46.09 2.29
4429 4593 8.424274 ACTTTTCTTTTGAAGGCAAAACATAG 57.576 30.769 0.00 0.00 46.09 2.23
4430 4594 6.843069 TTTCTTTTGAAGGCAAAACATAGC 57.157 33.333 0.00 0.00 46.09 2.97
4431 4595 5.789643 TCTTTTGAAGGCAAAACATAGCT 57.210 34.783 0.00 0.00 46.09 3.32
4432 4596 6.160576 TCTTTTGAAGGCAAAACATAGCTT 57.839 33.333 0.00 0.00 46.09 3.74
4433 4597 6.581712 TCTTTTGAAGGCAAAACATAGCTTT 58.418 32.000 0.00 0.00 46.09 3.51
4434 4598 7.721402 TCTTTTGAAGGCAAAACATAGCTTTA 58.279 30.769 0.00 0.00 46.09 1.85
4435 4599 8.367156 TCTTTTGAAGGCAAAACATAGCTTTAT 58.633 29.630 0.00 0.00 46.09 1.40
4436 4600 9.638239 CTTTTGAAGGCAAAACATAGCTTTATA 57.362 29.630 0.00 0.00 46.09 0.98
4437 4601 9.638239 TTTTGAAGGCAAAACATAGCTTTATAG 57.362 29.630 0.00 0.00 46.09 1.31
4438 4602 8.574251 TTGAAGGCAAAACATAGCTTTATAGA 57.426 30.769 0.00 0.00 29.69 1.98
4439 4603 8.752005 TGAAGGCAAAACATAGCTTTATAGAT 57.248 30.769 0.00 0.00 29.69 1.98
4440 4604 9.189156 TGAAGGCAAAACATAGCTTTATAGATT 57.811 29.630 0.00 0.00 29.69 2.40
4449 4613 8.983307 ACATAGCTTTATAGATTAACTACGGC 57.017 34.615 0.00 0.00 33.62 5.68
4450 4614 8.033626 ACATAGCTTTATAGATTAACTACGGCC 58.966 37.037 0.00 0.00 33.62 6.13
4451 4615 5.467705 AGCTTTATAGATTAACTACGGCCG 58.532 41.667 26.86 26.86 33.62 6.13
4452 4616 4.624452 GCTTTATAGATTAACTACGGCCGG 59.376 45.833 31.76 15.62 33.62 6.13
4453 4617 4.789012 TTATAGATTAACTACGGCCGGG 57.211 45.455 31.76 23.39 33.62 5.73
4454 4618 0.675633 TAGATTAACTACGGCCGGGC 59.324 55.000 31.76 20.04 0.00 6.13
4455 4619 1.144496 GATTAACTACGGCCGGGCA 59.856 57.895 31.76 13.32 0.00 5.36
4456 4620 0.250166 GATTAACTACGGCCGGGCAT 60.250 55.000 31.76 16.93 0.00 4.40
4457 4621 0.181824 ATTAACTACGGCCGGGCATT 59.818 50.000 31.76 19.47 0.00 3.56
4458 4622 0.035247 TTAACTACGGCCGGGCATTT 60.035 50.000 31.76 16.56 0.00 2.32
4459 4623 0.462403 TAACTACGGCCGGGCATTTC 60.462 55.000 31.76 1.70 0.00 2.17
4460 4624 2.124901 CTACGGCCGGGCATTTCA 60.125 61.111 31.76 6.33 0.00 2.69
4461 4625 2.437002 TACGGCCGGGCATTTCAC 60.437 61.111 31.76 0.46 0.00 3.18
4462 4626 3.980442 TACGGCCGGGCATTTCACC 62.980 63.158 31.76 4.44 0.00 4.02
4469 4633 1.211709 GGGCATTTCACCCGAAACG 59.788 57.895 0.00 0.00 43.75 3.60
4470 4634 1.443702 GGCATTTCACCCGAAACGC 60.444 57.895 0.00 0.00 46.83 4.84
4471 4635 1.284408 GCATTTCACCCGAAACGCA 59.716 52.632 1.52 0.00 46.79 5.24
4472 4636 0.318275 GCATTTCACCCGAAACGCAA 60.318 50.000 1.52 0.00 46.79 4.85
4473 4637 1.866063 GCATTTCACCCGAAACGCAAA 60.866 47.619 1.52 0.00 46.79 3.68
4474 4638 1.784283 CATTTCACCCGAAACGCAAAC 59.216 47.619 0.00 0.00 43.75 2.93
4475 4639 0.809385 TTTCACCCGAAACGCAAACA 59.191 45.000 0.00 0.00 36.19 2.83
4476 4640 0.378962 TTCACCCGAAACGCAAACAG 59.621 50.000 0.00 0.00 0.00 3.16
4477 4641 1.657181 CACCCGAAACGCAAACAGC 60.657 57.895 0.00 0.00 40.87 4.40
4478 4642 2.050442 CCCGAAACGCAAACAGCC 60.050 61.111 0.00 0.00 41.38 4.85
4479 4643 2.718731 CCGAAACGCAAACAGCCA 59.281 55.556 0.00 0.00 41.38 4.75
4480 4644 1.657181 CCGAAACGCAAACAGCCAC 60.657 57.895 0.00 0.00 41.38 5.01
4481 4645 1.063327 CGAAACGCAAACAGCCACA 59.937 52.632 0.00 0.00 41.38 4.17
4482 4646 0.929824 CGAAACGCAAACAGCCACAG 60.930 55.000 0.00 0.00 41.38 3.66
4483 4647 0.100503 GAAACGCAAACAGCCACAGT 59.899 50.000 0.00 0.00 41.38 3.55
4484 4648 0.179140 AAACGCAAACAGCCACAGTG 60.179 50.000 0.00 0.00 41.38 3.66
4485 4649 2.003658 AACGCAAACAGCCACAGTGG 62.004 55.000 16.16 16.16 41.38 4.00
4486 4650 2.730094 GCAAACAGCCACAGTGGG 59.270 61.111 21.77 8.00 38.19 4.61
4493 4657 4.323477 GCCACAGTGGGCGGTACA 62.323 66.667 21.77 0.00 45.40 2.90
4494 4658 2.668632 CCACAGTGGGCGGTACAT 59.331 61.111 12.40 0.00 32.67 2.29
4495 4659 1.002624 CCACAGTGGGCGGTACATT 60.003 57.895 12.40 0.00 32.67 2.71
4496 4660 0.250793 CCACAGTGGGCGGTACATTA 59.749 55.000 12.40 0.00 32.67 1.90
4497 4661 1.651987 CACAGTGGGCGGTACATTAG 58.348 55.000 0.00 0.00 0.00 1.73
4498 4662 1.206132 CACAGTGGGCGGTACATTAGA 59.794 52.381 0.00 0.00 0.00 2.10
4499 4663 1.480954 ACAGTGGGCGGTACATTAGAG 59.519 52.381 0.00 0.00 0.00 2.43
4500 4664 1.480954 CAGTGGGCGGTACATTAGAGT 59.519 52.381 0.00 0.00 0.00 3.24
4501 4665 2.093658 CAGTGGGCGGTACATTAGAGTT 60.094 50.000 0.00 0.00 0.00 3.01
4502 4666 2.167900 AGTGGGCGGTACATTAGAGTTC 59.832 50.000 0.00 0.00 0.00 3.01
4503 4667 1.483415 TGGGCGGTACATTAGAGTTCC 59.517 52.381 0.00 0.00 0.00 3.62
4504 4668 1.483415 GGGCGGTACATTAGAGTTCCA 59.517 52.381 0.00 0.00 0.00 3.53
4505 4669 2.547826 GGCGGTACATTAGAGTTCCAC 58.452 52.381 0.00 0.00 0.00 4.02
4506 4670 2.167900 GGCGGTACATTAGAGTTCCACT 59.832 50.000 0.00 0.00 0.00 4.00
4507 4671 3.369157 GGCGGTACATTAGAGTTCCACTT 60.369 47.826 0.00 0.00 0.00 3.16
4508 4672 3.864003 GCGGTACATTAGAGTTCCACTTC 59.136 47.826 0.00 0.00 0.00 3.01
4509 4673 4.619863 GCGGTACATTAGAGTTCCACTTCA 60.620 45.833 0.00 0.00 0.00 3.02
4510 4674 5.661458 CGGTACATTAGAGTTCCACTTCAT 58.339 41.667 0.00 0.00 0.00 2.57
4511 4675 6.682113 GCGGTACATTAGAGTTCCACTTCATA 60.682 42.308 0.00 0.00 0.00 2.15
4512 4676 6.696148 CGGTACATTAGAGTTCCACTTCATAC 59.304 42.308 0.00 0.00 0.00 2.39
4513 4677 7.553334 GGTACATTAGAGTTCCACTTCATACA 58.447 38.462 0.00 0.00 0.00 2.29
4514 4678 8.038944 GGTACATTAGAGTTCCACTTCATACAA 58.961 37.037 0.00 0.00 0.00 2.41
4515 4679 7.907214 ACATTAGAGTTCCACTTCATACAAC 57.093 36.000 0.00 0.00 0.00 3.32
4516 4680 6.879458 ACATTAGAGTTCCACTTCATACAACC 59.121 38.462 0.00 0.00 0.00 3.77
4517 4681 4.974645 AGAGTTCCACTTCATACAACCA 57.025 40.909 0.00 0.00 0.00 3.67
4518 4682 5.505181 AGAGTTCCACTTCATACAACCAT 57.495 39.130 0.00 0.00 0.00 3.55
4519 4683 5.880901 AGAGTTCCACTTCATACAACCATT 58.119 37.500 0.00 0.00 0.00 3.16
4520 4684 6.306987 AGAGTTCCACTTCATACAACCATTT 58.693 36.000 0.00 0.00 0.00 2.32
4521 4685 6.207417 AGAGTTCCACTTCATACAACCATTTG 59.793 38.462 0.00 0.00 38.83 2.32
4522 4686 5.243730 AGTTCCACTTCATACAACCATTTGG 59.756 40.000 0.00 0.00 37.00 3.28
4537 4701 5.310720 CCATTTGGTAAACTTCTACTGCC 57.689 43.478 0.00 0.00 0.00 4.85
4538 4702 4.764823 CCATTTGGTAAACTTCTACTGCCA 59.235 41.667 0.00 0.00 0.00 4.92
4539 4703 5.242838 CCATTTGGTAAACTTCTACTGCCAA 59.757 40.000 0.00 0.00 33.35 4.52
4540 4704 6.071391 CCATTTGGTAAACTTCTACTGCCAAT 60.071 38.462 0.00 0.00 34.94 3.16
4541 4705 6.969993 TTTGGTAAACTTCTACTGCCAATT 57.030 33.333 0.00 0.00 34.94 2.32
4542 4706 6.969993 TTGGTAAACTTCTACTGCCAATTT 57.030 33.333 0.00 0.00 30.64 1.82
4543 4707 6.325919 TGGTAAACTTCTACTGCCAATTTG 57.674 37.500 0.00 0.00 0.00 2.32
4544 4708 6.065374 TGGTAAACTTCTACTGCCAATTTGA 58.935 36.000 0.00 0.00 0.00 2.69
4545 4709 6.206634 TGGTAAACTTCTACTGCCAATTTGAG 59.793 38.462 0.00 0.00 0.00 3.02
4546 4710 4.773323 AACTTCTACTGCCAATTTGAGC 57.227 40.909 0.00 0.68 0.00 4.26
4547 4711 3.754965 ACTTCTACTGCCAATTTGAGCA 58.245 40.909 10.70 10.70 37.46 4.26
4548 4712 4.144297 ACTTCTACTGCCAATTTGAGCAA 58.856 39.130 11.83 0.00 38.82 3.91
4549 4713 4.217118 ACTTCTACTGCCAATTTGAGCAAG 59.783 41.667 11.83 8.60 38.82 4.01
4550 4714 2.489329 TCTACTGCCAATTTGAGCAAGC 59.511 45.455 11.83 1.99 38.82 4.01
4551 4715 1.335145 ACTGCCAATTTGAGCAAGCT 58.665 45.000 11.83 0.00 38.82 3.74
4552 4716 1.271656 ACTGCCAATTTGAGCAAGCTC 59.728 47.619 14.90 14.90 43.01 4.09
4562 4726 3.489731 GCAAGCTCATGCGCTACA 58.510 55.556 11.23 0.00 45.42 2.74
4563 4727 1.351012 GCAAGCTCATGCGCTACAG 59.649 57.895 11.23 5.54 45.42 2.74
4564 4728 1.086067 GCAAGCTCATGCGCTACAGA 61.086 55.000 11.23 0.00 45.42 3.41
4565 4729 1.362768 CAAGCTCATGCGCTACAGAA 58.637 50.000 11.23 0.00 45.42 3.02
4566 4730 1.938577 CAAGCTCATGCGCTACAGAAT 59.061 47.619 11.23 0.00 45.42 2.40
4567 4731 2.322355 AGCTCATGCGCTACAGAATT 57.678 45.000 8.80 0.00 45.42 2.17
4568 4732 2.208431 AGCTCATGCGCTACAGAATTC 58.792 47.619 8.80 0.00 45.42 2.17
4569 4733 1.935873 GCTCATGCGCTACAGAATTCA 59.064 47.619 9.73 0.00 0.00 2.57
4570 4734 2.547211 GCTCATGCGCTACAGAATTCAT 59.453 45.455 9.73 0.00 0.00 2.57
4571 4735 3.742882 GCTCATGCGCTACAGAATTCATA 59.257 43.478 9.73 0.00 0.00 2.15
4572 4736 4.143158 GCTCATGCGCTACAGAATTCATAG 60.143 45.833 9.73 9.91 0.00 2.23
4573 4737 3.742882 TCATGCGCTACAGAATTCATAGC 59.257 43.478 22.67 22.67 38.36 2.97
4574 4738 2.483876 TGCGCTACAGAATTCATAGCC 58.516 47.619 24.81 19.88 38.48 3.93
4575 4739 1.801178 GCGCTACAGAATTCATAGCCC 59.199 52.381 24.81 17.53 38.48 5.19
4576 4740 2.061773 CGCTACAGAATTCATAGCCCG 58.938 52.381 24.81 14.56 38.48 6.13
4577 4741 2.288213 CGCTACAGAATTCATAGCCCGA 60.288 50.000 24.81 0.00 38.48 5.14
4578 4742 3.728845 GCTACAGAATTCATAGCCCGAA 58.271 45.455 22.28 0.00 36.18 4.30
4579 4743 4.319177 GCTACAGAATTCATAGCCCGAAT 58.681 43.478 22.28 0.00 36.18 3.34
4580 4744 5.479306 GCTACAGAATTCATAGCCCGAATA 58.521 41.667 22.28 0.00 36.18 1.75
4581 4745 5.348997 GCTACAGAATTCATAGCCCGAATAC 59.651 44.000 22.28 2.54 36.18 1.89
4582 4746 5.290493 ACAGAATTCATAGCCCGAATACA 57.710 39.130 8.44 0.00 32.79 2.29
4583 4747 5.680619 ACAGAATTCATAGCCCGAATACAA 58.319 37.500 8.44 0.00 32.79 2.41
4584 4748 5.760253 ACAGAATTCATAGCCCGAATACAAG 59.240 40.000 8.44 0.00 32.79 3.16
4585 4749 4.757149 AGAATTCATAGCCCGAATACAAGC 59.243 41.667 8.44 0.00 32.79 4.01
4586 4750 3.552132 TTCATAGCCCGAATACAAGCA 57.448 42.857 0.00 0.00 0.00 3.91
4587 4751 3.111853 TCATAGCCCGAATACAAGCAG 57.888 47.619 0.00 0.00 0.00 4.24
4588 4752 1.532868 CATAGCCCGAATACAAGCAGC 59.467 52.381 0.00 0.00 0.00 5.25
4589 4753 0.179056 TAGCCCGAATACAAGCAGCC 60.179 55.000 0.00 0.00 0.00 4.85
4590 4754 1.748879 GCCCGAATACAAGCAGCCA 60.749 57.895 0.00 0.00 0.00 4.75
4591 4755 1.993369 GCCCGAATACAAGCAGCCAC 61.993 60.000 0.00 0.00 0.00 5.01
4592 4756 0.676466 CCCGAATACAAGCAGCCACA 60.676 55.000 0.00 0.00 0.00 4.17
4593 4757 0.447801 CCGAATACAAGCAGCCACAC 59.552 55.000 0.00 0.00 0.00 3.82
4594 4758 1.442769 CGAATACAAGCAGCCACACT 58.557 50.000 0.00 0.00 0.00 3.55
4595 4759 1.394917 CGAATACAAGCAGCCACACTC 59.605 52.381 0.00 0.00 0.00 3.51
4596 4760 1.740025 GAATACAAGCAGCCACACTCC 59.260 52.381 0.00 0.00 0.00 3.85
4597 4761 0.692476 ATACAAGCAGCCACACTCCA 59.308 50.000 0.00 0.00 0.00 3.86
4598 4762 0.250295 TACAAGCAGCCACACTCCAC 60.250 55.000 0.00 0.00 0.00 4.02
4599 4763 1.228063 CAAGCAGCCACACTCCACT 60.228 57.895 0.00 0.00 0.00 4.00
4600 4764 0.820891 CAAGCAGCCACACTCCACTT 60.821 55.000 0.00 0.00 0.00 3.16
4601 4765 0.820891 AAGCAGCCACACTCCACTTG 60.821 55.000 0.00 0.00 0.00 3.16
4602 4766 2.263741 GCAGCCACACTCCACTTGG 61.264 63.158 0.00 0.00 0.00 3.61
4603 4767 1.451504 CAGCCACACTCCACTTGGA 59.548 57.895 0.00 0.00 43.08 3.53
4613 4777 0.472471 TCCACTTGGAGAACCACACC 59.528 55.000 0.00 0.00 46.80 4.16
4614 4778 0.474184 CCACTTGGAGAACCACACCT 59.526 55.000 0.00 0.00 46.80 4.00
4615 4779 1.133792 CCACTTGGAGAACCACACCTT 60.134 52.381 0.00 0.00 46.80 3.50
4616 4780 1.949525 CACTTGGAGAACCACACCTTG 59.050 52.381 0.00 0.00 46.80 3.61
4617 4781 1.843851 ACTTGGAGAACCACACCTTGA 59.156 47.619 0.00 0.00 46.80 3.02
4618 4782 2.158755 ACTTGGAGAACCACACCTTGAG 60.159 50.000 0.00 0.00 46.80 3.02
4619 4783 1.507140 TGGAGAACCACACCTTGAGT 58.493 50.000 0.00 0.00 41.77 3.41
4620 4784 1.843851 TGGAGAACCACACCTTGAGTT 59.156 47.619 0.00 0.00 41.77 3.01
4621 4785 2.222027 GGAGAACCACACCTTGAGTTG 58.778 52.381 0.00 0.00 35.97 3.16
4622 4786 2.222027 GAGAACCACACCTTGAGTTGG 58.778 52.381 0.00 0.00 34.59 3.77
4623 4787 1.843851 AGAACCACACCTTGAGTTGGA 59.156 47.619 0.00 0.00 33.42 3.53
4624 4788 2.241176 AGAACCACACCTTGAGTTGGAA 59.759 45.455 0.00 0.00 33.42 3.53
4625 4789 2.052782 ACCACACCTTGAGTTGGAAC 57.947 50.000 0.00 0.00 33.42 3.62
4626 4790 1.564348 ACCACACCTTGAGTTGGAACT 59.436 47.619 0.00 0.00 43.16 3.01
4627 4791 2.025321 ACCACACCTTGAGTTGGAACTT 60.025 45.455 0.00 0.00 39.88 2.66
4628 4792 2.358898 CCACACCTTGAGTTGGAACTTG 59.641 50.000 0.00 0.00 39.88 3.16
4629 4793 3.278574 CACACCTTGAGTTGGAACTTGA 58.721 45.455 0.00 0.00 39.88 3.02
4630 4794 3.885297 CACACCTTGAGTTGGAACTTGAT 59.115 43.478 0.00 0.00 39.88 2.57
4631 4795 5.063204 CACACCTTGAGTTGGAACTTGATA 58.937 41.667 0.00 0.00 39.88 2.15
4632 4796 5.707298 CACACCTTGAGTTGGAACTTGATAT 59.293 40.000 0.00 0.00 39.88 1.63
4633 4797 5.940470 ACACCTTGAGTTGGAACTTGATATC 59.060 40.000 0.00 0.00 39.88 1.63
4634 4798 6.176183 CACCTTGAGTTGGAACTTGATATCT 58.824 40.000 3.98 0.00 39.88 1.98
4635 4799 6.656693 CACCTTGAGTTGGAACTTGATATCTT 59.343 38.462 3.98 0.00 39.88 2.40
4636 4800 6.881602 ACCTTGAGTTGGAACTTGATATCTTC 59.118 38.462 3.98 0.00 39.88 2.87
4637 4801 6.881065 CCTTGAGTTGGAACTTGATATCTTCA 59.119 38.462 3.98 0.00 39.88 3.02
4638 4802 7.391554 CCTTGAGTTGGAACTTGATATCTTCAA 59.608 37.037 3.98 0.00 42.09 2.69
4639 4803 8.868522 TTGAGTTGGAACTTGATATCTTCAAT 57.131 30.769 3.98 0.00 43.30 2.57
4640 4804 9.958180 TTGAGTTGGAACTTGATATCTTCAATA 57.042 29.630 3.98 0.00 43.30 1.90
4641 4805 9.958180 TGAGTTGGAACTTGATATCTTCAATAA 57.042 29.630 3.98 0.00 43.30 1.40
4643 4807 9.965902 AGTTGGAACTTGATATCTTCAATAACT 57.034 29.630 3.98 8.41 43.30 2.24
4649 4813 9.890629 AACTTGATATCTTCAATAACTACTGCA 57.109 29.630 3.98 0.00 43.30 4.41
4655 4819 7.944729 ATCTTCAATAACTACTGCATTTGGT 57.055 32.000 0.00 0.00 0.00 3.67
4656 4820 7.144722 TCTTCAATAACTACTGCATTTGGTG 57.855 36.000 0.00 0.00 0.00 4.17
4657 4821 6.714810 TCTTCAATAACTACTGCATTTGGTGT 59.285 34.615 0.00 0.00 0.00 4.16
4658 4822 6.252967 TCAATAACTACTGCATTTGGTGTG 57.747 37.500 0.00 0.00 0.00 3.82
4659 4823 5.182950 TCAATAACTACTGCATTTGGTGTGG 59.817 40.000 0.00 0.00 0.00 4.17
4660 4824 1.247567 ACTACTGCATTTGGTGTGGC 58.752 50.000 0.00 0.00 0.00 5.01
4661 4825 0.168788 CTACTGCATTTGGTGTGGCG 59.831 55.000 0.00 0.00 0.00 5.69
4662 4826 0.536233 TACTGCATTTGGTGTGGCGT 60.536 50.000 0.00 0.00 0.00 5.68
4663 4827 1.081242 CTGCATTTGGTGTGGCGTC 60.081 57.895 0.00 0.00 0.00 5.19
4664 4828 1.518056 CTGCATTTGGTGTGGCGTCT 61.518 55.000 0.00 0.00 0.00 4.18
4665 4829 1.081242 GCATTTGGTGTGGCGTCTG 60.081 57.895 0.00 0.00 0.00 3.51
4666 4830 1.081242 CATTTGGTGTGGCGTCTGC 60.081 57.895 0.00 0.00 41.71 4.26
4676 4840 2.812499 GCGTCTGCCTTCCGGATA 59.188 61.111 4.15 0.00 33.98 2.59
4677 4841 1.367840 GCGTCTGCCTTCCGGATAT 59.632 57.895 4.15 0.00 33.98 1.63
4678 4842 0.667792 GCGTCTGCCTTCCGGATATC 60.668 60.000 4.15 0.00 33.98 1.63
4679 4843 0.673985 CGTCTGCCTTCCGGATATCA 59.326 55.000 4.15 2.13 0.00 2.15
4680 4844 1.068588 CGTCTGCCTTCCGGATATCAA 59.931 52.381 4.15 0.00 0.00 2.57
4681 4845 2.484889 GTCTGCCTTCCGGATATCAAC 58.515 52.381 4.15 0.00 0.00 3.18
4682 4846 2.103263 GTCTGCCTTCCGGATATCAACT 59.897 50.000 4.15 0.00 0.00 3.16
4683 4847 2.103094 TCTGCCTTCCGGATATCAACTG 59.897 50.000 4.15 0.00 0.00 3.16
4684 4848 1.230324 GCCTTCCGGATATCAACTGC 58.770 55.000 4.15 0.00 0.00 4.40
4685 4849 1.475034 GCCTTCCGGATATCAACTGCA 60.475 52.381 4.15 0.00 0.00 4.41
4686 4850 2.811873 GCCTTCCGGATATCAACTGCAT 60.812 50.000 4.15 0.00 0.00 3.96
4687 4851 3.480470 CCTTCCGGATATCAACTGCATT 58.520 45.455 4.15 0.00 0.00 3.56
4688 4852 4.641396 CCTTCCGGATATCAACTGCATTA 58.359 43.478 4.15 0.00 0.00 1.90
4689 4853 4.692625 CCTTCCGGATATCAACTGCATTAG 59.307 45.833 4.15 0.00 0.00 1.73
4690 4854 3.664107 TCCGGATATCAACTGCATTAGC 58.336 45.455 0.00 0.00 42.57 3.09
4710 4874 3.731089 GCAAGCAGCTCTGAATCTATCT 58.269 45.455 0.00 0.00 41.15 1.98
4711 4875 3.742369 GCAAGCAGCTCTGAATCTATCTC 59.258 47.826 0.00 0.00 41.15 2.75
4712 4876 4.740034 GCAAGCAGCTCTGAATCTATCTCA 60.740 45.833 0.00 0.00 41.15 3.27
4713 4877 5.358090 CAAGCAGCTCTGAATCTATCTCAA 58.642 41.667 0.00 0.00 0.00 3.02
4714 4878 5.611128 AGCAGCTCTGAATCTATCTCAAA 57.389 39.130 0.29 0.00 0.00 2.69
4715 4879 5.603596 AGCAGCTCTGAATCTATCTCAAAG 58.396 41.667 0.29 0.00 0.00 2.77
4716 4880 5.363292 AGCAGCTCTGAATCTATCTCAAAGA 59.637 40.000 0.29 0.00 0.00 2.52
4717 4881 5.463061 GCAGCTCTGAATCTATCTCAAAGAC 59.537 44.000 0.29 0.00 0.00 3.01
4718 4882 6.571605 CAGCTCTGAATCTATCTCAAAGACA 58.428 40.000 0.00 0.00 0.00 3.41
4719 4883 7.040494 CAGCTCTGAATCTATCTCAAAGACAA 58.960 38.462 0.00 0.00 0.00 3.18
4720 4884 7.010367 CAGCTCTGAATCTATCTCAAAGACAAC 59.990 40.741 0.00 0.00 0.00 3.32
4721 4885 7.041107 GCTCTGAATCTATCTCAAAGACAACT 58.959 38.462 0.00 0.00 0.00 3.16
4722 4886 7.222611 GCTCTGAATCTATCTCAAAGACAACTC 59.777 40.741 0.00 0.00 0.00 3.01
4723 4887 8.359875 TCTGAATCTATCTCAAAGACAACTCT 57.640 34.615 0.00 0.00 0.00 3.24
4724 4888 9.467796 TCTGAATCTATCTCAAAGACAACTCTA 57.532 33.333 0.00 0.00 0.00 2.43
4725 4889 9.734620 CTGAATCTATCTCAAAGACAACTCTAG 57.265 37.037 0.00 0.00 0.00 2.43
4726 4890 9.249053 TGAATCTATCTCAAAGACAACTCTAGT 57.751 33.333 0.00 0.00 0.00 2.57
4727 4891 9.515020 GAATCTATCTCAAAGACAACTCTAGTG 57.485 37.037 0.00 0.00 0.00 2.74
4728 4892 8.815565 ATCTATCTCAAAGACAACTCTAGTGA 57.184 34.615 0.00 0.00 0.00 3.41
4729 4893 8.637196 TCTATCTCAAAGACAACTCTAGTGAA 57.363 34.615 0.00 0.00 0.00 3.18
4730 4894 8.516234 TCTATCTCAAAGACAACTCTAGTGAAC 58.484 37.037 0.00 0.00 0.00 3.18
4731 4895 5.844004 TCTCAAAGACAACTCTAGTGAACC 58.156 41.667 0.00 0.00 0.00 3.62
4732 4896 4.957296 TCAAAGACAACTCTAGTGAACCC 58.043 43.478 0.00 0.00 0.00 4.11
4733 4897 4.407621 TCAAAGACAACTCTAGTGAACCCA 59.592 41.667 0.00 0.00 0.00 4.51
4734 4898 5.104693 TCAAAGACAACTCTAGTGAACCCAA 60.105 40.000 0.00 0.00 0.00 4.12
4735 4899 4.608948 AGACAACTCTAGTGAACCCAAG 57.391 45.455 0.00 0.00 0.00 3.61
4736 4900 4.223953 AGACAACTCTAGTGAACCCAAGA 58.776 43.478 0.00 0.00 0.00 3.02
4737 4901 4.841246 AGACAACTCTAGTGAACCCAAGAT 59.159 41.667 0.00 0.00 0.00 2.40
4738 4902 5.046950 AGACAACTCTAGTGAACCCAAGATC 60.047 44.000 0.00 0.00 0.00 2.75
4739 4903 4.593206 ACAACTCTAGTGAACCCAAGATCA 59.407 41.667 0.00 0.00 0.00 2.92
4740 4904 5.174395 CAACTCTAGTGAACCCAAGATCAG 58.826 45.833 0.00 0.00 0.00 2.90
4741 4905 3.196685 ACTCTAGTGAACCCAAGATCAGC 59.803 47.826 0.00 0.00 0.00 4.26
4742 4906 3.445008 TCTAGTGAACCCAAGATCAGCT 58.555 45.455 0.00 0.00 0.00 4.24
4743 4907 2.486472 AGTGAACCCAAGATCAGCTG 57.514 50.000 7.63 7.63 0.00 4.24
4744 4908 1.701847 AGTGAACCCAAGATCAGCTGT 59.298 47.619 14.67 0.42 0.00 4.40
4745 4909 2.107204 AGTGAACCCAAGATCAGCTGTT 59.893 45.455 14.67 5.03 0.00 3.16
4746 4910 2.227388 GTGAACCCAAGATCAGCTGTTG 59.773 50.000 14.67 10.95 0.00 3.33
4747 4911 2.158623 TGAACCCAAGATCAGCTGTTGT 60.159 45.455 14.67 0.14 0.00 3.32
4748 4912 2.191128 ACCCAAGATCAGCTGTTGTC 57.809 50.000 14.67 10.62 0.00 3.18
4749 4913 1.081892 CCCAAGATCAGCTGTTGTCG 58.918 55.000 14.67 0.94 0.00 4.35
4750 4914 0.445436 CCAAGATCAGCTGTTGTCGC 59.555 55.000 14.67 0.00 0.00 5.19
4751 4915 1.436600 CAAGATCAGCTGTTGTCGCT 58.563 50.000 14.67 0.00 38.49 4.93
4752 4916 2.610433 CAAGATCAGCTGTTGTCGCTA 58.390 47.619 14.67 0.00 35.63 4.26
4753 4917 2.285827 AGATCAGCTGTTGTCGCTAC 57.714 50.000 14.67 0.00 35.63 3.58
4754 4918 1.134965 AGATCAGCTGTTGTCGCTACC 60.135 52.381 14.67 0.00 35.63 3.18
4755 4919 0.458543 ATCAGCTGTTGTCGCTACCG 60.459 55.000 14.67 0.00 35.63 4.02
4756 4920 2.432628 AGCTGTTGTCGCTACCGC 60.433 61.111 0.00 0.00 35.63 5.68
4757 4921 3.488090 GCTGTTGTCGCTACCGCC 61.488 66.667 0.00 0.00 0.00 6.13
4758 4922 3.179265 CTGTTGTCGCTACCGCCG 61.179 66.667 0.00 0.00 0.00 6.46
4785 4949 4.069232 CGCTGACCTCCGCTCCAA 62.069 66.667 0.00 0.00 0.00 3.53
4786 4950 2.347490 GCTGACCTCCGCTCCAAA 59.653 61.111 0.00 0.00 0.00 3.28
4787 4951 1.302511 GCTGACCTCCGCTCCAAAA 60.303 57.895 0.00 0.00 0.00 2.44
4788 4952 1.301677 GCTGACCTCCGCTCCAAAAG 61.302 60.000 0.00 0.00 0.00 2.27
4800 4964 3.777465 CTCCAAAAGCATCCTGATGTG 57.223 47.619 8.79 0.00 40.80 3.21
4801 4965 3.087031 CTCCAAAAGCATCCTGATGTGT 58.913 45.455 8.79 0.00 40.80 3.72
4802 4966 3.499338 TCCAAAAGCATCCTGATGTGTT 58.501 40.909 8.79 1.02 40.80 3.32
4803 4967 3.507233 TCCAAAAGCATCCTGATGTGTTC 59.493 43.478 8.79 0.00 40.80 3.18
4804 4968 3.367703 CCAAAAGCATCCTGATGTGTTCC 60.368 47.826 8.79 0.00 40.80 3.62
4805 4969 3.446442 AAAGCATCCTGATGTGTTCCT 57.554 42.857 8.79 0.00 40.80 3.36
4806 4970 2.414994 AGCATCCTGATGTGTTCCTG 57.585 50.000 8.79 0.00 40.80 3.86
4807 4971 0.737219 GCATCCTGATGTGTTCCTGC 59.263 55.000 8.79 0.00 40.80 4.85
4808 4972 1.386533 CATCCTGATGTGTTCCTGCC 58.613 55.000 0.00 0.00 34.23 4.85
4809 4973 0.107508 ATCCTGATGTGTTCCTGCCG 60.108 55.000 0.00 0.00 0.00 5.69
4810 4974 1.191489 TCCTGATGTGTTCCTGCCGA 61.191 55.000 0.00 0.00 0.00 5.54
4811 4975 1.021390 CCTGATGTGTTCCTGCCGAC 61.021 60.000 0.00 0.00 0.00 4.79
4812 4976 1.003839 TGATGTGTTCCTGCCGACC 60.004 57.895 0.00 0.00 0.00 4.79
4813 4977 1.003839 GATGTGTTCCTGCCGACCA 60.004 57.895 0.00 0.00 0.00 4.02
4814 4978 1.003355 ATGTGTTCCTGCCGACCAG 60.003 57.895 0.00 0.00 41.41 4.00
4815 4979 3.050275 GTGTTCCTGCCGACCAGC 61.050 66.667 0.00 0.00 40.36 4.85
4816 4980 4.680237 TGTTCCTGCCGACCAGCG 62.680 66.667 0.00 0.00 40.36 5.18
4832 4996 3.003478 CGCGAGCGACAATTACCC 58.997 61.111 12.58 0.00 42.83 3.69
4833 4997 1.807981 CGCGAGCGACAATTACCCA 60.808 57.895 12.58 0.00 42.83 4.51
4834 4998 1.151777 CGCGAGCGACAATTACCCAT 61.152 55.000 12.58 0.00 42.83 4.00
4835 4999 0.582005 GCGAGCGACAATTACCCATC 59.418 55.000 0.00 0.00 0.00 3.51
4836 5000 1.217882 CGAGCGACAATTACCCATCC 58.782 55.000 0.00 0.00 0.00 3.51
4837 5001 1.472552 CGAGCGACAATTACCCATCCA 60.473 52.381 0.00 0.00 0.00 3.41
4838 5002 2.213499 GAGCGACAATTACCCATCCAG 58.787 52.381 0.00 0.00 0.00 3.86
4839 5003 0.663153 GCGACAATTACCCATCCAGC 59.337 55.000 0.00 0.00 0.00 4.85
4840 5004 2.016604 GCGACAATTACCCATCCAGCA 61.017 52.381 0.00 0.00 0.00 4.41
4841 5005 2.575532 CGACAATTACCCATCCAGCAT 58.424 47.619 0.00 0.00 0.00 3.79
4842 5006 2.951642 CGACAATTACCCATCCAGCATT 59.048 45.455 0.00 0.00 0.00 3.56
4843 5007 3.243168 CGACAATTACCCATCCAGCATTG 60.243 47.826 0.00 0.00 0.00 2.82
4844 5008 3.701040 GACAATTACCCATCCAGCATTGT 59.299 43.478 0.00 0.00 37.52 2.71
4845 5009 3.701040 ACAATTACCCATCCAGCATTGTC 59.299 43.478 0.00 0.00 30.75 3.18
4846 5010 3.956199 CAATTACCCATCCAGCATTGTCT 59.044 43.478 0.00 0.00 0.00 3.41
4847 5011 3.281727 TTACCCATCCAGCATTGTCTC 57.718 47.619 0.00 0.00 0.00 3.36
4848 5012 0.257039 ACCCATCCAGCATTGTCTCC 59.743 55.000 0.00 0.00 0.00 3.71
4849 5013 0.256752 CCCATCCAGCATTGTCTCCA 59.743 55.000 0.00 0.00 0.00 3.86
4850 5014 1.676746 CCATCCAGCATTGTCTCCAG 58.323 55.000 0.00 0.00 0.00 3.86
4851 5015 1.022735 CATCCAGCATTGTCTCCAGC 58.977 55.000 0.00 0.00 0.00 4.85
4852 5016 0.463295 ATCCAGCATTGTCTCCAGCG 60.463 55.000 0.00 0.00 0.00 5.18
4853 5017 1.078918 CCAGCATTGTCTCCAGCGA 60.079 57.895 0.00 0.00 0.00 4.93
4854 5018 1.364626 CCAGCATTGTCTCCAGCGAC 61.365 60.000 0.00 0.00 34.52 5.19
4855 5019 0.671472 CAGCATTGTCTCCAGCGACA 60.671 55.000 0.00 0.00 41.82 4.35
4859 5023 3.588277 TTGTCTCCAGCGACAACTC 57.412 52.632 0.00 0.00 45.92 3.01
4860 5024 0.033504 TTGTCTCCAGCGACAACTCC 59.966 55.000 0.00 0.00 45.92 3.85
4861 5025 1.079750 GTCTCCAGCGACAACTCCC 60.080 63.158 0.00 0.00 34.11 4.30
4862 5026 2.266055 CTCCAGCGACAACTCCCC 59.734 66.667 0.00 0.00 0.00 4.81
4863 5027 2.525629 TCCAGCGACAACTCCCCA 60.526 61.111 0.00 0.00 0.00 4.96
4864 5028 2.046892 CCAGCGACAACTCCCCAG 60.047 66.667 0.00 0.00 0.00 4.45
4865 5029 2.743928 CAGCGACAACTCCCCAGC 60.744 66.667 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.093606 GGTAGACCTAACCTCACAAGCC 60.094 54.545 0.00 0.00 33.97 4.35
36 37 3.248024 ACCATCCCATATTCGGCTAGAA 58.752 45.455 0.00 0.00 43.93 2.10
44 45 3.139077 GTTGGACGACCATCCCATATTC 58.861 50.000 7.61 0.00 46.34 1.75
45 46 2.158667 GGTTGGACGACCATCCCATATT 60.159 50.000 19.58 0.00 45.47 1.28
73 74 3.232213 TGTCTCGTAGAAGAATGTGGC 57.768 47.619 0.00 0.00 34.09 5.01
108 109 4.909880 GTGACGCCAAAAGACATCTAAAAC 59.090 41.667 0.00 0.00 0.00 2.43
127 128 2.597520 GCTAGGAAGTCTTCACGTGAC 58.402 52.381 19.90 7.86 34.88 3.67
130 131 0.526662 CGGCTAGGAAGTCTTCACGT 59.473 55.000 14.49 1.30 0.00 4.49
158 159 4.188462 TGTCGAAGTCAGAACAACATTGT 58.812 39.130 0.00 0.00 44.72 2.71
159 160 4.794248 TGTCGAAGTCAGAACAACATTG 57.206 40.909 0.00 0.00 0.00 2.82
166 167 4.678287 TCGTAACATTGTCGAAGTCAGAAC 59.322 41.667 0.00 0.00 0.00 3.01
172 173 4.807304 ACACTTTCGTAACATTGTCGAAGT 59.193 37.500 11.58 9.86 42.79 3.01
175 176 5.761003 TCTACACTTTCGTAACATTGTCGA 58.239 37.500 0.00 0.00 0.00 4.20
188 189 1.711206 GACACCGCCTCTACACTTTC 58.289 55.000 0.00 0.00 0.00 2.62
189 190 0.038526 CGACACCGCCTCTACACTTT 60.039 55.000 0.00 0.00 0.00 2.66
212 213 1.896660 GTGTTGTGTCGTGGGCCAT 60.897 57.895 10.70 0.00 0.00 4.40
222 223 4.295870 CTGTACACTCATACGTGTTGTGT 58.704 43.478 19.29 19.29 45.27 3.72
234 235 1.006043 CCTCCTCCTCCTGTACACTCA 59.994 57.143 0.00 0.00 0.00 3.41
240 241 1.212934 ACCGTCCTCCTCCTCCTGTA 61.213 60.000 0.00 0.00 0.00 2.74
263 267 0.391661 CACGGGGACTTGAGGACATG 60.392 60.000 0.00 0.00 0.00 3.21
314 319 2.030274 CCAACGATTCAACCAACCCTTC 60.030 50.000 0.00 0.00 0.00 3.46
325 330 5.926214 TTTACGAAATGACCAACGATTCA 57.074 34.783 0.00 0.00 0.00 2.57
409 426 7.115520 CAGTCAATTTAGTCTATATGCAGTCCG 59.884 40.741 0.00 0.00 0.00 4.79
420 437 8.958119 AGTGTTTGTTCAGTCAATTTAGTCTA 57.042 30.769 0.00 0.00 0.00 2.59
547 566 4.456280 TGTCTATTCACGCTTCAGTCAT 57.544 40.909 0.00 0.00 0.00 3.06
548 567 3.934457 TGTCTATTCACGCTTCAGTCA 57.066 42.857 0.00 0.00 0.00 3.41
675 706 3.526931 TTTGGGCGTCACAAAATTTCA 57.473 38.095 5.03 0.00 35.11 2.69
677 708 4.119136 CTCTTTTGGGCGTCACAAAATTT 58.881 39.130 16.58 0.00 44.13 1.82
708 739 2.736826 CCTCCTCCTTTCCTCGGGC 61.737 68.421 0.00 0.00 0.00 6.13
926 963 0.833834 AGAGTCTCAGGTGGTGGTGG 60.834 60.000 1.94 0.00 0.00 4.61
927 964 0.319728 CAGAGTCTCAGGTGGTGGTG 59.680 60.000 1.94 0.00 0.00 4.17
928 965 0.833834 CCAGAGTCTCAGGTGGTGGT 60.834 60.000 1.94 0.00 0.00 4.16
989 1026 2.325082 ACCGCCATTGTCAACGAGC 61.325 57.895 0.00 0.00 0.00 5.03
1277 1324 3.135712 TGAATTGGAGGTGCGGTGTATAT 59.864 43.478 0.00 0.00 0.00 0.86
1278 1325 2.502130 TGAATTGGAGGTGCGGTGTATA 59.498 45.455 0.00 0.00 0.00 1.47
1327 1374 3.068064 CCATGGGAACGGCCAACC 61.068 66.667 2.85 1.93 38.95 3.77
1510 1565 2.223340 GCATGGCGAAGTAAATCCACAG 60.223 50.000 0.00 0.00 0.00 3.66
1525 1580 2.613595 TCAGTAATTCGTCATGCATGGC 59.386 45.455 25.97 23.81 0.00 4.40
1551 1607 6.116126 CGATTAACAGAGGAAAGGGAGATTT 58.884 40.000 0.00 0.00 0.00 2.17
1552 1608 5.396884 CCGATTAACAGAGGAAAGGGAGATT 60.397 44.000 0.00 0.00 0.00 2.40
1598 1657 3.928727 ACATTCAGAACACAAGCCATG 57.071 42.857 0.00 0.00 0.00 3.66
1623 1682 8.567948 CCTGTATTAAACATTCAGAACACAAGT 58.432 33.333 0.00 0.00 37.50 3.16
1624 1683 8.567948 ACCTGTATTAAACATTCAGAACACAAG 58.432 33.333 0.00 0.00 37.50 3.16
1625 1684 8.349245 CACCTGTATTAAACATTCAGAACACAA 58.651 33.333 0.00 0.00 37.50 3.33
1626 1685 7.500892 ACACCTGTATTAAACATTCAGAACACA 59.499 33.333 0.00 0.00 37.50 3.72
1627 1686 7.871853 ACACCTGTATTAAACATTCAGAACAC 58.128 34.615 0.00 0.00 37.50 3.32
1628 1687 8.995220 GTACACCTGTATTAAACATTCAGAACA 58.005 33.333 0.00 0.00 37.50 3.18
1629 1688 8.995220 TGTACACCTGTATTAAACATTCAGAAC 58.005 33.333 0.00 0.00 37.50 3.01
1630 1689 9.214957 CTGTACACCTGTATTAAACATTCAGAA 57.785 33.333 0.00 0.00 37.50 3.02
1631 1690 8.590204 TCTGTACACCTGTATTAAACATTCAGA 58.410 33.333 0.00 0.00 37.50 3.27
1632 1691 8.771920 TCTGTACACCTGTATTAAACATTCAG 57.228 34.615 0.00 0.00 37.50 3.02
1633 1692 8.995220 GTTCTGTACACCTGTATTAAACATTCA 58.005 33.333 0.00 0.00 37.50 2.57
1634 1693 8.995220 TGTTCTGTACACCTGTATTAAACATTC 58.005 33.333 0.00 0.00 37.50 2.67
1635 1694 8.911918 TGTTCTGTACACCTGTATTAAACATT 57.088 30.769 0.00 0.00 37.50 2.71
1636 1695 8.154856 ACTGTTCTGTACACCTGTATTAAACAT 58.845 33.333 0.00 0.00 33.10 2.71
1637 1696 7.502696 ACTGTTCTGTACACCTGTATTAAACA 58.497 34.615 0.00 8.19 32.76 2.83
1638 1697 7.958053 ACTGTTCTGTACACCTGTATTAAAC 57.042 36.000 0.00 0.00 32.54 2.01
1639 1698 8.308931 CCTACTGTTCTGTACACCTGTATTAAA 58.691 37.037 0.00 0.00 32.54 1.52
1640 1699 7.578189 GCCTACTGTTCTGTACACCTGTATTAA 60.578 40.741 0.00 0.00 32.54 1.40
1761 1841 4.398319 CAGGACAGTCCAAAGGTAAATGT 58.602 43.478 22.31 0.00 39.61 2.71
1784 1864 3.963665 TCCAAACTCGCATTTGAAACAG 58.036 40.909 11.47 0.00 41.28 3.16
1823 1908 6.492087 AGACAGAGCCATCTTAGTAAGATACC 59.508 42.308 22.16 16.09 46.20 2.73
1832 1917 5.879223 ACAAAATCAGACAGAGCCATCTTAG 59.121 40.000 0.00 0.00 31.64 2.18
1833 1918 5.809001 ACAAAATCAGACAGAGCCATCTTA 58.191 37.500 0.00 0.00 31.64 2.10
1834 1919 4.660168 ACAAAATCAGACAGAGCCATCTT 58.340 39.130 0.00 0.00 31.64 2.40
1835 1920 4.298103 ACAAAATCAGACAGAGCCATCT 57.702 40.909 0.00 0.00 35.63 2.90
1858 1943 5.029650 TCATTTCAATACGAGTGCACAAC 57.970 39.130 21.04 11.64 0.00 3.32
1916 2003 7.489574 TTGTTTAAATTGAACAAGGGCATTC 57.510 32.000 11.28 0.00 40.84 2.67
1959 2048 5.360591 AGTGAAAGACAAGTTAGTCCACAG 58.639 41.667 0.00 0.00 39.34 3.66
2070 2159 4.102681 AGGTTGAGGGATAATTAACTCCGG 59.897 45.833 0.00 0.00 31.95 5.14
2091 2180 2.378028 GCTCGCAGCTTAACTCAGG 58.622 57.895 0.00 0.00 38.45 3.86
2159 2248 1.343069 AATATCCCTCCCTCTGCGTC 58.657 55.000 0.00 0.00 0.00 5.19
2173 2262 5.300969 TCACAGCTGTTCTTGCAAATATC 57.699 39.130 18.94 0.00 0.00 1.63
2300 2389 5.600696 AGCACCACCAAAGACAAATAAAAG 58.399 37.500 0.00 0.00 0.00 2.27
2410 2499 7.852945 GTGAATATGCCAGAAACTTAAGAATCG 59.147 37.037 10.09 3.95 0.00 3.34
2566 2657 4.948004 TCACCAGTACTACCTATCACTGTG 59.052 45.833 0.17 0.17 37.32 3.66
2567 2658 5.188988 TCACCAGTACTACCTATCACTGT 57.811 43.478 0.00 0.00 37.32 3.55
2569 2660 6.895756 TCAAATCACCAGTACTACCTATCACT 59.104 38.462 0.00 0.00 0.00 3.41
2600 2691 7.872113 AGGAATTAAGGCTGATAAGAAACAG 57.128 36.000 0.00 0.00 37.22 3.16
2618 2709 1.713078 AGCTCCAGGTTCCAAGGAATT 59.287 47.619 4.63 0.00 36.45 2.17
2619 2710 1.376649 AGCTCCAGGTTCCAAGGAAT 58.623 50.000 4.63 0.00 36.45 3.01
2620 2711 2.038863 TAGCTCCAGGTTCCAAGGAA 57.961 50.000 0.00 0.00 0.00 3.36
2680 2802 5.415701 ACTGGATGAATCGCAAATTTGTACT 59.584 36.000 19.03 2.40 0.00 2.73
2723 2846 9.612066 AACAGGTTTGAAATGTTAACATGAAAT 57.388 25.926 21.46 8.72 37.12 2.17
2774 2897 9.911788 ACATACCTGAAGATATTGAGAAACATT 57.088 29.630 0.00 0.00 0.00 2.71
2787 2910 5.370584 TCCCATCATCAACATACCTGAAGAT 59.629 40.000 0.00 0.00 32.84 2.40
2791 2914 3.392285 CCTCCCATCATCAACATACCTGA 59.608 47.826 0.00 0.00 0.00 3.86
2967 3099 4.021544 CCAGGCCTAGCAAACATAAAACAA 60.022 41.667 3.98 0.00 0.00 2.83
2992 3124 1.078848 GCGTCAGGGTCAATGAGCT 60.079 57.895 12.42 0.00 0.00 4.09
3008 3140 6.686679 TCAATGCTTCGAAAACATATTTAGCG 59.313 34.615 12.33 0.00 0.00 4.26
3023 3155 0.731417 CAGCCCTTCTCAATGCTTCG 59.269 55.000 0.00 0.00 30.08 3.79
3086 3218 0.404040 TCAGGGCCTGTAAAAGTGGG 59.596 55.000 31.60 3.49 32.61 4.61
3110 3242 1.276138 ACTGCATCGAACCAGTGATCA 59.724 47.619 17.33 0.00 40.55 2.92
3181 3313 4.023963 GGTCAAGGTTCAGTTAACAAGCTC 60.024 45.833 8.61 0.00 40.08 4.09
3222 3354 8.928270 AACTGAAGGTCAAACTTATAGATACG 57.072 34.615 0.00 0.00 0.00 3.06
3236 3368 8.934023 AACATTAATAGGAAAACTGAAGGTCA 57.066 30.769 0.00 0.00 0.00 4.02
3299 3431 0.390492 GGCTTTTCTGCTGCAACCTT 59.610 50.000 3.02 0.00 0.00 3.50
3595 3729 4.639310 ACAGCTGCCAGATCTTTATTTGAG 59.361 41.667 15.27 0.00 0.00 3.02
3596 3730 4.592942 ACAGCTGCCAGATCTTTATTTGA 58.407 39.130 15.27 0.00 0.00 2.69
3680 3818 0.400594 AGAACAGTTACCAGGGTGCC 59.599 55.000 0.06 0.00 0.00 5.01
3772 3910 7.988737 TGTGAGCAACCATATAATTTCTGAAG 58.011 34.615 0.00 0.00 0.00 3.02
3888 4026 1.560611 ACCAGAGGCGTAGTAGAGTCT 59.439 52.381 0.00 0.00 0.00 3.24
3895 4033 0.614979 ATGACCACCAGAGGCGTAGT 60.615 55.000 0.00 0.00 0.00 2.73
3898 4036 1.913262 TCATGACCACCAGAGGCGT 60.913 57.895 0.00 0.00 0.00 5.68
3904 4042 0.528466 CGATCCGTCATGACCACCAG 60.528 60.000 20.03 5.53 0.00 4.00
3905 4043 1.515487 CGATCCGTCATGACCACCA 59.485 57.895 20.03 1.88 0.00 4.17
3906 4044 1.883084 GCGATCCGTCATGACCACC 60.883 63.158 20.03 6.24 0.00 4.61
3910 4048 1.883084 GGTGGCGATCCGTCATGAC 60.883 63.158 16.21 16.21 45.01 3.06
3911 4049 2.499205 GGTGGCGATCCGTCATGA 59.501 61.111 0.00 0.00 45.01 3.07
3912 4050 2.961721 CGGTGGCGATCCGTCATG 60.962 66.667 0.00 0.00 45.01 3.07
3926 4066 0.685660 GACAGGAAGAAGGGAACGGT 59.314 55.000 0.00 0.00 0.00 4.83
3929 4069 1.619332 ACTCGACAGGAAGAAGGGAAC 59.381 52.381 0.00 0.00 0.00 3.62
3962 4104 3.118992 CCTTTTTATTGAAGCTCAGGGGC 60.119 47.826 0.00 0.00 0.00 5.80
4006 4148 1.689273 GGCACTATGTACAGAGGAGGG 59.311 57.143 20.93 8.34 0.00 4.30
4112 4254 3.838565 TGGAAATTAAGGCCTGACACAA 58.161 40.909 5.69 0.00 0.00 3.33
4117 4259 4.998051 AGACTTTGGAAATTAAGGCCTGA 58.002 39.130 5.69 0.00 0.00 3.86
4192 4335 1.165270 GCACACGGCAGGAACTATTT 58.835 50.000 0.00 0.00 43.97 1.40
4193 4336 2.854522 GCACACGGCAGGAACTATT 58.145 52.632 0.00 0.00 43.97 1.73
4225 4368 2.009042 GCAGGGGTCATTCTCGTGAAG 61.009 57.143 6.07 0.00 34.68 3.02
4332 4495 0.774491 AGTTCAAAGGGGGCTGGGTA 60.774 55.000 0.00 0.00 0.00 3.69
4338 4501 2.579410 TTCTACAGTTCAAAGGGGGC 57.421 50.000 0.00 0.00 0.00 5.80
4399 4563 7.503521 TTTGCCTTCAAAAGAAAAGTTTGTT 57.496 28.000 0.00 0.00 39.08 2.83
4411 4575 9.638239 CTATAAAGCTATGTTTTGCCTTCAAAA 57.362 29.630 0.00 0.00 46.51 2.44
4412 4576 9.019656 TCTATAAAGCTATGTTTTGCCTTCAAA 57.980 29.630 0.00 0.00 40.17 2.69
4413 4577 8.574251 TCTATAAAGCTATGTTTTGCCTTCAA 57.426 30.769 0.00 0.00 0.00 2.69
4414 4578 8.752005 ATCTATAAAGCTATGTTTTGCCTTCA 57.248 30.769 0.00 0.00 0.00 3.02
4423 4587 9.420551 GCCGTAGTTAATCTATAAAGCTATGTT 57.579 33.333 0.00 0.00 0.00 2.71
4424 4588 8.033626 GGCCGTAGTTAATCTATAAAGCTATGT 58.966 37.037 0.00 0.00 0.00 2.29
4425 4589 7.220300 CGGCCGTAGTTAATCTATAAAGCTATG 59.780 40.741 19.50 0.00 0.00 2.23
4426 4590 7.256286 CGGCCGTAGTTAATCTATAAAGCTAT 58.744 38.462 19.50 0.00 0.00 2.97
4427 4591 6.349611 CCGGCCGTAGTTAATCTATAAAGCTA 60.350 42.308 26.12 0.00 0.00 3.32
4428 4592 5.467705 CGGCCGTAGTTAATCTATAAAGCT 58.532 41.667 19.50 0.00 0.00 3.74
4429 4593 4.624452 CCGGCCGTAGTTAATCTATAAAGC 59.376 45.833 26.12 0.00 0.00 3.51
4430 4594 5.166398 CCCGGCCGTAGTTAATCTATAAAG 58.834 45.833 26.12 1.37 0.00 1.85
4431 4595 4.561326 GCCCGGCCGTAGTTAATCTATAAA 60.561 45.833 26.12 0.00 0.00 1.40
4432 4596 3.056607 GCCCGGCCGTAGTTAATCTATAA 60.057 47.826 26.12 0.00 0.00 0.98
4433 4597 2.493278 GCCCGGCCGTAGTTAATCTATA 59.507 50.000 26.12 0.00 0.00 1.31
4434 4598 1.274447 GCCCGGCCGTAGTTAATCTAT 59.726 52.381 26.12 0.00 0.00 1.98
4435 4599 0.675633 GCCCGGCCGTAGTTAATCTA 59.324 55.000 26.12 0.00 0.00 1.98
4436 4600 1.332144 TGCCCGGCCGTAGTTAATCT 61.332 55.000 26.12 0.00 0.00 2.40
4437 4601 0.250166 ATGCCCGGCCGTAGTTAATC 60.250 55.000 26.12 2.29 0.00 1.75
4438 4602 0.181824 AATGCCCGGCCGTAGTTAAT 59.818 50.000 26.12 5.79 0.00 1.40
4439 4603 0.035247 AAATGCCCGGCCGTAGTTAA 60.035 50.000 26.12 3.35 0.00 2.01
4440 4604 0.462403 GAAATGCCCGGCCGTAGTTA 60.462 55.000 26.12 9.00 0.00 2.24
4441 4605 1.747745 GAAATGCCCGGCCGTAGTT 60.748 57.895 26.12 15.22 0.00 2.24
4442 4606 2.124860 GAAATGCCCGGCCGTAGT 60.125 61.111 26.12 6.40 0.00 2.73
4443 4607 2.124901 TGAAATGCCCGGCCGTAG 60.125 61.111 26.12 16.51 0.00 3.51
4444 4608 2.437002 GTGAAATGCCCGGCCGTA 60.437 61.111 26.12 10.65 0.00 4.02
4451 4615 1.211709 CGTTTCGGGTGAAATGCCC 59.788 57.895 0.00 0.00 45.31 5.36
4452 4616 4.859784 CGTTTCGGGTGAAATGCC 57.140 55.556 0.00 0.00 45.31 4.40
4455 4619 1.405821 TGTTTGCGTTTCGGGTGAAAT 59.594 42.857 0.00 0.00 45.31 2.17
4456 4620 0.809385 TGTTTGCGTTTCGGGTGAAA 59.191 45.000 0.00 0.00 41.69 2.69
4457 4621 0.378962 CTGTTTGCGTTTCGGGTGAA 59.621 50.000 0.00 0.00 0.00 3.18
4458 4622 2.018544 CTGTTTGCGTTTCGGGTGA 58.981 52.632 0.00 0.00 0.00 4.02
4459 4623 1.657181 GCTGTTTGCGTTTCGGGTG 60.657 57.895 0.00 0.00 0.00 4.61
4460 4624 2.719354 GCTGTTTGCGTTTCGGGT 59.281 55.556 0.00 0.00 0.00 5.28
4461 4625 2.050442 GGCTGTTTGCGTTTCGGG 60.050 61.111 0.00 0.00 44.05 5.14
4462 4626 1.657181 GTGGCTGTTTGCGTTTCGG 60.657 57.895 0.00 0.00 44.05 4.30
4463 4627 0.929824 CTGTGGCTGTTTGCGTTTCG 60.930 55.000 0.00 0.00 44.05 3.46
4464 4628 0.100503 ACTGTGGCTGTTTGCGTTTC 59.899 50.000 0.00 0.00 44.05 2.78
4465 4629 0.179140 CACTGTGGCTGTTTGCGTTT 60.179 50.000 0.00 0.00 44.05 3.60
4466 4630 1.433064 CACTGTGGCTGTTTGCGTT 59.567 52.632 0.00 0.00 44.05 4.84
4467 4631 2.480610 CCACTGTGGCTGTTTGCGT 61.481 57.895 14.87 0.00 44.05 5.24
4468 4632 2.332514 CCACTGTGGCTGTTTGCG 59.667 61.111 14.87 0.00 44.05 4.85
4469 4633 2.730094 CCCACTGTGGCTGTTTGC 59.270 61.111 21.47 0.00 35.79 3.68
4478 4642 1.206132 TCTAATGTACCGCCCACTGTG 59.794 52.381 0.00 0.00 0.00 3.66
4479 4643 1.480954 CTCTAATGTACCGCCCACTGT 59.519 52.381 0.00 0.00 0.00 3.55
4480 4644 1.480954 ACTCTAATGTACCGCCCACTG 59.519 52.381 0.00 0.00 0.00 3.66
4481 4645 1.861982 ACTCTAATGTACCGCCCACT 58.138 50.000 0.00 0.00 0.00 4.00
4482 4646 2.547826 GAACTCTAATGTACCGCCCAC 58.452 52.381 0.00 0.00 0.00 4.61
4483 4647 1.483415 GGAACTCTAATGTACCGCCCA 59.517 52.381 0.00 0.00 0.00 5.36
4484 4648 1.483415 TGGAACTCTAATGTACCGCCC 59.517 52.381 0.00 0.00 0.00 6.13
4485 4649 2.547826 GTGGAACTCTAATGTACCGCC 58.452 52.381 0.00 0.00 0.00 6.13
4496 4660 8.658992 CCAAATGGTTGTATGAAGTGGAACTCT 61.659 40.741 0.00 0.00 38.76 3.24
4497 4661 6.570378 CCAAATGGTTGTATGAAGTGGAACTC 60.570 42.308 0.00 0.00 38.76 3.01
4498 4662 5.243730 CCAAATGGTTGTATGAAGTGGAACT 59.756 40.000 0.00 0.00 40.65 3.01
4499 4663 5.469479 CCAAATGGTTGTATGAAGTGGAAC 58.531 41.667 0.00 0.00 32.40 3.62
4500 4664 5.720371 CCAAATGGTTGTATGAAGTGGAA 57.280 39.130 0.00 0.00 32.40 3.53
4515 4679 4.764823 TGGCAGTAGAAGTTTACCAAATGG 59.235 41.667 0.00 0.00 42.17 3.16
4516 4680 5.957842 TGGCAGTAGAAGTTTACCAAATG 57.042 39.130 0.00 0.00 0.00 2.32
4517 4681 7.539034 AATTGGCAGTAGAAGTTTACCAAAT 57.461 32.000 0.00 0.00 39.02 2.32
4518 4682 6.969993 AATTGGCAGTAGAAGTTTACCAAA 57.030 33.333 0.00 0.00 39.02 3.28
4519 4683 6.547880 TCAAATTGGCAGTAGAAGTTTACCAA 59.452 34.615 0.00 0.00 39.79 3.67
4520 4684 6.065374 TCAAATTGGCAGTAGAAGTTTACCA 58.935 36.000 0.00 0.00 0.00 3.25
4521 4685 6.569179 TCAAATTGGCAGTAGAAGTTTACC 57.431 37.500 0.00 0.00 0.00 2.85
4522 4686 6.086871 GCTCAAATTGGCAGTAGAAGTTTAC 58.913 40.000 0.00 0.00 0.00 2.01
4523 4687 5.767665 TGCTCAAATTGGCAGTAGAAGTTTA 59.232 36.000 5.29 0.00 34.22 2.01
4524 4688 4.584325 TGCTCAAATTGGCAGTAGAAGTTT 59.416 37.500 5.29 0.00 34.22 2.66
4525 4689 4.144297 TGCTCAAATTGGCAGTAGAAGTT 58.856 39.130 5.29 0.00 34.22 2.66
4526 4690 3.754965 TGCTCAAATTGGCAGTAGAAGT 58.245 40.909 5.29 0.00 34.22 3.01
4527 4691 4.730657 CTTGCTCAAATTGGCAGTAGAAG 58.269 43.478 8.62 1.73 39.68 2.85
4528 4692 3.057315 GCTTGCTCAAATTGGCAGTAGAA 60.057 43.478 8.62 0.00 39.68 2.10
4529 4693 2.489329 GCTTGCTCAAATTGGCAGTAGA 59.511 45.455 8.62 0.00 39.68 2.59
4530 4694 2.490903 AGCTTGCTCAAATTGGCAGTAG 59.509 45.455 8.62 6.54 39.68 2.57
4531 4695 2.489329 GAGCTTGCTCAAATTGGCAGTA 59.511 45.455 16.71 0.00 39.68 2.74
4532 4696 1.271656 GAGCTTGCTCAAATTGGCAGT 59.728 47.619 16.71 0.00 39.68 4.40
4533 4697 1.271379 TGAGCTTGCTCAAATTGGCAG 59.729 47.619 21.22 5.78 39.68 4.85
4534 4698 1.330234 TGAGCTTGCTCAAATTGGCA 58.670 45.000 21.22 5.29 36.62 4.92
4535 4699 2.268298 CATGAGCTTGCTCAAATTGGC 58.732 47.619 26.00 0.00 36.88 4.52
4536 4700 2.268298 GCATGAGCTTGCTCAAATTGG 58.732 47.619 26.00 15.09 39.57 3.16
4537 4701 1.917955 CGCATGAGCTTGCTCAAATTG 59.082 47.619 26.00 20.52 40.54 2.32
4538 4702 1.734707 GCGCATGAGCTTGCTCAAATT 60.735 47.619 26.00 9.97 40.54 1.82
4539 4703 0.179145 GCGCATGAGCTTGCTCAAAT 60.179 50.000 26.00 10.66 40.54 2.32
4540 4704 1.210931 GCGCATGAGCTTGCTCAAA 59.789 52.632 26.00 7.21 40.54 2.69
4541 4705 0.391528 TAGCGCATGAGCTTGCTCAA 60.392 50.000 29.05 7.27 46.80 3.02
4542 4706 1.086067 GTAGCGCATGAGCTTGCTCA 61.086 55.000 29.05 24.76 46.80 4.26
4543 4707 1.086067 TGTAGCGCATGAGCTTGCTC 61.086 55.000 29.05 16.46 46.80 4.26
4544 4708 1.078918 TGTAGCGCATGAGCTTGCT 60.079 52.632 29.05 14.45 46.80 3.91
4545 4709 1.086067 TCTGTAGCGCATGAGCTTGC 61.086 55.000 29.05 20.95 46.80 4.01
4546 4710 1.362768 TTCTGTAGCGCATGAGCTTG 58.637 50.000 29.05 18.35 46.80 4.01
4547 4711 2.322355 ATTCTGTAGCGCATGAGCTT 57.678 45.000 29.05 13.23 46.80 3.74
4549 4713 1.935873 TGAATTCTGTAGCGCATGAGC 59.064 47.619 14.17 14.17 37.42 4.26
4550 4714 4.143158 GCTATGAATTCTGTAGCGCATGAG 60.143 45.833 20.11 1.02 32.48 2.90
4551 4715 3.742882 GCTATGAATTCTGTAGCGCATGA 59.257 43.478 20.11 0.00 32.48 3.07
4552 4716 3.120408 GGCTATGAATTCTGTAGCGCATG 60.120 47.826 24.27 0.00 41.26 4.06
4553 4717 3.070018 GGCTATGAATTCTGTAGCGCAT 58.930 45.455 24.27 0.00 41.26 4.73
4554 4718 2.483876 GGCTATGAATTCTGTAGCGCA 58.516 47.619 24.27 0.00 41.26 6.09
4555 4719 1.801178 GGGCTATGAATTCTGTAGCGC 59.199 52.381 27.45 27.45 43.75 5.92
4556 4720 2.061773 CGGGCTATGAATTCTGTAGCG 58.938 52.381 24.27 14.90 41.26 4.26
4557 4721 3.386768 TCGGGCTATGAATTCTGTAGC 57.613 47.619 23.72 23.72 39.98 3.58
4558 4722 6.455647 TGTATTCGGGCTATGAATTCTGTAG 58.544 40.000 7.05 9.94 37.28 2.74
4559 4723 6.413783 TGTATTCGGGCTATGAATTCTGTA 57.586 37.500 7.05 0.00 37.28 2.74
4560 4724 5.290493 TGTATTCGGGCTATGAATTCTGT 57.710 39.130 7.05 0.00 37.28 3.41
4561 4725 5.334414 GCTTGTATTCGGGCTATGAATTCTG 60.334 44.000 7.05 0.00 37.28 3.02
4562 4726 4.757149 GCTTGTATTCGGGCTATGAATTCT 59.243 41.667 7.05 0.00 37.28 2.40
4563 4727 4.515191 TGCTTGTATTCGGGCTATGAATTC 59.485 41.667 0.00 0.00 37.28 2.17
4564 4728 4.460263 TGCTTGTATTCGGGCTATGAATT 58.540 39.130 5.71 0.00 37.28 2.17
4565 4729 4.067896 CTGCTTGTATTCGGGCTATGAAT 58.932 43.478 5.71 5.71 39.32 2.57
4566 4730 3.466836 CTGCTTGTATTCGGGCTATGAA 58.533 45.455 0.00 0.00 0.00 2.57
4567 4731 2.806745 GCTGCTTGTATTCGGGCTATGA 60.807 50.000 0.00 0.00 0.00 2.15
4568 4732 1.532868 GCTGCTTGTATTCGGGCTATG 59.467 52.381 0.00 0.00 0.00 2.23
4569 4733 1.543429 GGCTGCTTGTATTCGGGCTAT 60.543 52.381 0.00 0.00 0.00 2.97
4570 4734 0.179056 GGCTGCTTGTATTCGGGCTA 60.179 55.000 0.00 0.00 0.00 3.93
4571 4735 1.452108 GGCTGCTTGTATTCGGGCT 60.452 57.895 0.00 0.00 0.00 5.19
4572 4736 1.748879 TGGCTGCTTGTATTCGGGC 60.749 57.895 0.00 0.00 35.04 6.13
4573 4737 0.676466 TGTGGCTGCTTGTATTCGGG 60.676 55.000 0.00 0.00 0.00 5.14
4574 4738 0.447801 GTGTGGCTGCTTGTATTCGG 59.552 55.000 0.00 0.00 0.00 4.30
4575 4739 1.394917 GAGTGTGGCTGCTTGTATTCG 59.605 52.381 0.00 0.00 0.00 3.34
4576 4740 1.740025 GGAGTGTGGCTGCTTGTATTC 59.260 52.381 0.00 0.00 32.34 1.75
4577 4741 1.073763 TGGAGTGTGGCTGCTTGTATT 59.926 47.619 0.00 0.00 36.43 1.89
4578 4742 0.692476 TGGAGTGTGGCTGCTTGTAT 59.308 50.000 0.00 0.00 36.43 2.29
4579 4743 0.250295 GTGGAGTGTGGCTGCTTGTA 60.250 55.000 0.00 0.00 36.43 2.41
4580 4744 1.526917 GTGGAGTGTGGCTGCTTGT 60.527 57.895 0.00 0.00 36.43 3.16
4581 4745 0.820891 AAGTGGAGTGTGGCTGCTTG 60.821 55.000 0.00 0.00 36.43 4.01
4582 4746 0.820891 CAAGTGGAGTGTGGCTGCTT 60.821 55.000 0.00 0.00 36.43 3.91
4583 4747 1.228063 CAAGTGGAGTGTGGCTGCT 60.228 57.895 0.00 0.00 36.43 4.24
4584 4748 2.263741 CCAAGTGGAGTGTGGCTGC 61.264 63.158 0.00 0.00 37.39 5.25
4585 4749 1.451504 TCCAAGTGGAGTGTGGCTG 59.548 57.895 0.00 0.00 39.78 4.85
4586 4750 3.986054 TCCAAGTGGAGTGTGGCT 58.014 55.556 0.00 0.00 39.78 4.75
4594 4758 0.472471 GGTGTGGTTCTCCAAGTGGA 59.528 55.000 0.00 0.00 46.15 4.02
4595 4759 0.474184 AGGTGTGGTTCTCCAAGTGG 59.526 55.000 0.00 0.00 46.15 4.00
4596 4760 1.949525 CAAGGTGTGGTTCTCCAAGTG 59.050 52.381 0.00 0.00 46.15 3.16
4597 4761 1.843851 TCAAGGTGTGGTTCTCCAAGT 59.156 47.619 0.00 0.00 46.15 3.16
4598 4762 2.158755 ACTCAAGGTGTGGTTCTCCAAG 60.159 50.000 0.00 0.00 46.15 3.61
4599 4763 1.843851 ACTCAAGGTGTGGTTCTCCAA 59.156 47.619 0.00 0.00 46.15 3.53
4600 4764 1.507140 ACTCAAGGTGTGGTTCTCCA 58.493 50.000 0.00 0.00 42.05 3.86
4601 4765 2.222027 CAACTCAAGGTGTGGTTCTCC 58.778 52.381 0.00 0.00 0.00 3.71
4602 4766 2.158813 TCCAACTCAAGGTGTGGTTCTC 60.159 50.000 0.00 0.00 32.15 2.87
4603 4767 1.843851 TCCAACTCAAGGTGTGGTTCT 59.156 47.619 0.00 0.00 32.15 3.01
4604 4768 2.341846 TCCAACTCAAGGTGTGGTTC 57.658 50.000 0.00 0.00 32.15 3.62
4605 4769 2.025321 AGTTCCAACTCAAGGTGTGGTT 60.025 45.455 0.00 0.00 32.86 3.67
4606 4770 1.564348 AGTTCCAACTCAAGGTGTGGT 59.436 47.619 0.00 0.00 32.86 4.16
4607 4771 2.348411 AGTTCCAACTCAAGGTGTGG 57.652 50.000 0.00 0.00 32.86 4.17
4608 4772 3.278574 TCAAGTTCCAACTCAAGGTGTG 58.721 45.455 0.00 0.00 38.57 3.82
4609 4773 3.644966 TCAAGTTCCAACTCAAGGTGT 57.355 42.857 0.00 0.00 38.57 4.16
4610 4774 6.176183 AGATATCAAGTTCCAACTCAAGGTG 58.824 40.000 5.32 0.00 38.57 4.00
4611 4775 6.380079 AGATATCAAGTTCCAACTCAAGGT 57.620 37.500 5.32 0.00 38.57 3.50
4612 4776 6.881065 TGAAGATATCAAGTTCCAACTCAAGG 59.119 38.462 5.32 0.00 38.57 3.61
4613 4777 7.912056 TGAAGATATCAAGTTCCAACTCAAG 57.088 36.000 5.32 0.00 38.57 3.02
4629 4793 9.632638 ACCAAATGCAGTAGTTATTGAAGATAT 57.367 29.630 0.00 0.00 0.00 1.63
4630 4794 8.892723 CACCAAATGCAGTAGTTATTGAAGATA 58.107 33.333 0.00 0.00 0.00 1.98
4631 4795 7.394359 ACACCAAATGCAGTAGTTATTGAAGAT 59.606 33.333 0.00 0.00 0.00 2.40
4632 4796 6.714810 ACACCAAATGCAGTAGTTATTGAAGA 59.285 34.615 0.00 0.00 0.00 2.87
4633 4797 6.803320 CACACCAAATGCAGTAGTTATTGAAG 59.197 38.462 0.00 0.00 0.00 3.02
4634 4798 6.294453 CCACACCAAATGCAGTAGTTATTGAA 60.294 38.462 0.00 0.00 0.00 2.69
4635 4799 5.182950 CCACACCAAATGCAGTAGTTATTGA 59.817 40.000 0.00 0.00 0.00 2.57
4636 4800 5.401550 CCACACCAAATGCAGTAGTTATTG 58.598 41.667 0.00 0.00 0.00 1.90
4637 4801 4.082245 GCCACACCAAATGCAGTAGTTATT 60.082 41.667 0.00 0.00 0.00 1.40
4638 4802 3.443681 GCCACACCAAATGCAGTAGTTAT 59.556 43.478 0.00 0.00 0.00 1.89
4639 4803 2.817258 GCCACACCAAATGCAGTAGTTA 59.183 45.455 0.00 0.00 0.00 2.24
4640 4804 1.613437 GCCACACCAAATGCAGTAGTT 59.387 47.619 0.00 0.00 0.00 2.24
4641 4805 1.247567 GCCACACCAAATGCAGTAGT 58.752 50.000 0.00 0.00 0.00 2.73
4642 4806 0.168788 CGCCACACCAAATGCAGTAG 59.831 55.000 0.00 0.00 0.00 2.57
4643 4807 0.536233 ACGCCACACCAAATGCAGTA 60.536 50.000 0.00 0.00 0.00 2.74
4644 4808 1.795170 GACGCCACACCAAATGCAGT 61.795 55.000 0.00 0.00 0.00 4.40
4645 4809 1.081242 GACGCCACACCAAATGCAG 60.081 57.895 0.00 0.00 0.00 4.41
4646 4810 1.528076 AGACGCCACACCAAATGCA 60.528 52.632 0.00 0.00 0.00 3.96
4647 4811 1.081242 CAGACGCCACACCAAATGC 60.081 57.895 0.00 0.00 0.00 3.56
4648 4812 1.081242 GCAGACGCCACACCAAATG 60.081 57.895 0.00 0.00 0.00 2.32
4649 4813 3.354678 GCAGACGCCACACCAAAT 58.645 55.556 0.00 0.00 0.00 2.32
4666 4830 6.819194 GCTAATGCAGTTGATATCCGGAAGG 61.819 48.000 9.01 0.00 46.40 3.46
4667 4831 4.153117 GCTAATGCAGTTGATATCCGGAAG 59.847 45.833 9.01 0.00 39.41 3.46
4668 4832 4.065088 GCTAATGCAGTTGATATCCGGAA 58.935 43.478 9.01 0.00 39.41 4.30
4669 4833 3.070878 TGCTAATGCAGTTGATATCCGGA 59.929 43.478 6.61 6.61 45.31 5.14
4670 4834 3.402110 TGCTAATGCAGTTGATATCCGG 58.598 45.455 0.00 0.00 45.31 5.14
4689 4853 3.731089 AGATAGATTCAGAGCTGCTTGC 58.269 45.455 2.53 0.00 43.29 4.01
4690 4854 4.946445 TGAGATAGATTCAGAGCTGCTTG 58.054 43.478 2.53 4.59 0.00 4.01
4691 4855 5.611128 TTGAGATAGATTCAGAGCTGCTT 57.389 39.130 2.53 0.00 0.00 3.91
4692 4856 5.363292 TCTTTGAGATAGATTCAGAGCTGCT 59.637 40.000 0.00 0.00 29.51 4.24
4693 4857 5.463061 GTCTTTGAGATAGATTCAGAGCTGC 59.537 44.000 0.00 0.00 29.51 5.25
4694 4858 6.571605 TGTCTTTGAGATAGATTCAGAGCTG 58.428 40.000 0.00 0.00 29.51 4.24
4695 4859 6.788598 TGTCTTTGAGATAGATTCAGAGCT 57.211 37.500 0.00 0.00 29.51 4.09
4696 4860 7.041107 AGTTGTCTTTGAGATAGATTCAGAGC 58.959 38.462 0.00 0.00 29.51 4.09
4697 4861 8.469200 AGAGTTGTCTTTGAGATAGATTCAGAG 58.531 37.037 0.00 0.00 0.00 3.35
4698 4862 8.359875 AGAGTTGTCTTTGAGATAGATTCAGA 57.640 34.615 0.00 0.00 0.00 3.27
4699 4863 9.734620 CTAGAGTTGTCTTTGAGATAGATTCAG 57.265 37.037 0.00 0.00 33.84 3.02
4700 4864 9.249053 ACTAGAGTTGTCTTTGAGATAGATTCA 57.751 33.333 0.00 0.00 33.84 2.57
4701 4865 9.515020 CACTAGAGTTGTCTTTGAGATAGATTC 57.485 37.037 0.00 0.00 33.84 2.52
4702 4866 9.249053 TCACTAGAGTTGTCTTTGAGATAGATT 57.751 33.333 0.00 0.00 33.84 2.40
4703 4867 8.815565 TCACTAGAGTTGTCTTTGAGATAGAT 57.184 34.615 0.00 0.00 33.84 1.98
4704 4868 8.516234 GTTCACTAGAGTTGTCTTTGAGATAGA 58.484 37.037 0.00 0.00 33.84 1.98
4705 4869 7.757624 GGTTCACTAGAGTTGTCTTTGAGATAG 59.242 40.741 0.00 0.00 33.84 2.08
4706 4870 7.309867 GGGTTCACTAGAGTTGTCTTTGAGATA 60.310 40.741 0.00 0.00 33.84 1.98
4707 4871 6.459923 GGTTCACTAGAGTTGTCTTTGAGAT 58.540 40.000 0.00 0.00 33.84 2.75
4708 4872 5.221461 GGGTTCACTAGAGTTGTCTTTGAGA 60.221 44.000 0.00 0.00 33.84 3.27
4709 4873 4.991687 GGGTTCACTAGAGTTGTCTTTGAG 59.008 45.833 0.00 0.00 33.84 3.02
4710 4874 4.407621 TGGGTTCACTAGAGTTGTCTTTGA 59.592 41.667 0.00 0.00 33.84 2.69
4711 4875 4.703897 TGGGTTCACTAGAGTTGTCTTTG 58.296 43.478 0.00 0.00 33.84 2.77
4712 4876 5.130477 TCTTGGGTTCACTAGAGTTGTCTTT 59.870 40.000 0.00 0.00 33.84 2.52
4713 4877 4.654262 TCTTGGGTTCACTAGAGTTGTCTT 59.346 41.667 0.00 0.00 33.84 3.01
4714 4878 4.223953 TCTTGGGTTCACTAGAGTTGTCT 58.776 43.478 0.00 0.00 36.75 3.41
4715 4879 4.602340 TCTTGGGTTCACTAGAGTTGTC 57.398 45.455 0.00 0.00 0.00 3.18
4716 4880 4.593206 TGATCTTGGGTTCACTAGAGTTGT 59.407 41.667 0.00 0.00 0.00 3.32
4717 4881 5.152623 TGATCTTGGGTTCACTAGAGTTG 57.847 43.478 0.00 0.00 0.00 3.16
4718 4882 4.323104 GCTGATCTTGGGTTCACTAGAGTT 60.323 45.833 0.00 0.00 0.00 3.01
4719 4883 3.196685 GCTGATCTTGGGTTCACTAGAGT 59.803 47.826 0.00 0.00 0.00 3.24
4720 4884 3.450457 AGCTGATCTTGGGTTCACTAGAG 59.550 47.826 0.00 0.00 0.00 2.43
4721 4885 3.196469 CAGCTGATCTTGGGTTCACTAGA 59.804 47.826 8.42 0.00 0.00 2.43
4722 4886 3.055530 ACAGCTGATCTTGGGTTCACTAG 60.056 47.826 23.35 0.00 0.00 2.57
4723 4887 2.906389 ACAGCTGATCTTGGGTTCACTA 59.094 45.455 23.35 0.00 0.00 2.74
4724 4888 1.701847 ACAGCTGATCTTGGGTTCACT 59.298 47.619 23.35 0.00 0.00 3.41
4725 4889 2.191128 ACAGCTGATCTTGGGTTCAC 57.809 50.000 23.35 0.00 0.00 3.18
4726 4890 2.158623 ACAACAGCTGATCTTGGGTTCA 60.159 45.455 23.35 0.00 0.00 3.18
4727 4891 2.485814 GACAACAGCTGATCTTGGGTTC 59.514 50.000 23.35 4.93 0.00 3.62
4728 4892 2.508526 GACAACAGCTGATCTTGGGTT 58.491 47.619 23.35 0.00 0.00 4.11
4729 4893 1.609061 CGACAACAGCTGATCTTGGGT 60.609 52.381 23.35 1.59 0.00 4.51
4730 4894 1.081892 CGACAACAGCTGATCTTGGG 58.918 55.000 23.35 7.50 0.00 4.12
4731 4895 0.445436 GCGACAACAGCTGATCTTGG 59.555 55.000 23.35 5.91 0.00 3.61
4732 4896 1.436600 AGCGACAACAGCTGATCTTG 58.563 50.000 23.35 16.96 44.22 3.02
4733 4897 2.611518 GTAGCGACAACAGCTGATCTT 58.388 47.619 23.35 0.48 45.60 2.40
4734 4898 1.134965 GGTAGCGACAACAGCTGATCT 60.135 52.381 23.35 4.34 45.60 2.75
4735 4899 1.281899 GGTAGCGACAACAGCTGATC 58.718 55.000 23.35 13.52 45.60 2.92
4736 4900 0.458543 CGGTAGCGACAACAGCTGAT 60.459 55.000 23.35 5.41 45.60 2.90
4737 4901 1.080772 CGGTAGCGACAACAGCTGA 60.081 57.895 23.35 0.00 45.60 4.26
4738 4902 2.730672 GCGGTAGCGACAACAGCTG 61.731 63.158 20.16 13.48 45.60 4.24
4740 4904 3.488090 GGCGGTAGCGACAACAGC 61.488 66.667 20.16 0.00 46.35 4.40
4741 4905 3.179265 CGGCGGTAGCGACAACAG 61.179 66.667 21.67 0.00 46.35 3.16
4760 4924 4.479993 GAGGTCAGCGCCATGGCT 62.480 66.667 33.07 14.30 46.13 4.75
4780 4944 3.087031 ACACATCAGGATGCTTTTGGAG 58.913 45.455 9.12 0.00 42.39 3.86
4781 4945 3.159213 ACACATCAGGATGCTTTTGGA 57.841 42.857 9.12 0.00 42.39 3.53
4782 4946 3.367703 GGAACACATCAGGATGCTTTTGG 60.368 47.826 9.12 0.00 42.39 3.28
4783 4947 3.508793 AGGAACACATCAGGATGCTTTTG 59.491 43.478 9.12 3.12 42.39 2.44
4784 4948 3.508793 CAGGAACACATCAGGATGCTTTT 59.491 43.478 9.12 0.52 42.39 2.27
4785 4949 3.087031 CAGGAACACATCAGGATGCTTT 58.913 45.455 9.12 2.87 42.39 3.51
4786 4950 2.719739 CAGGAACACATCAGGATGCTT 58.280 47.619 9.12 1.42 42.39 3.91
4787 4951 1.681166 GCAGGAACACATCAGGATGCT 60.681 52.381 9.12 0.00 42.39 3.79
4788 4952 0.737219 GCAGGAACACATCAGGATGC 59.263 55.000 9.12 0.00 42.39 3.91
4789 4953 1.386533 GGCAGGAACACATCAGGATG 58.613 55.000 7.70 7.70 44.15 3.51
4790 4954 0.107508 CGGCAGGAACACATCAGGAT 60.108 55.000 0.00 0.00 0.00 3.24
4791 4955 1.191489 TCGGCAGGAACACATCAGGA 61.191 55.000 0.00 0.00 0.00 3.86
4792 4956 1.021390 GTCGGCAGGAACACATCAGG 61.021 60.000 0.00 0.00 0.00 3.86
4793 4957 1.021390 GGTCGGCAGGAACACATCAG 61.021 60.000 0.00 0.00 30.54 2.90
4794 4958 1.003839 GGTCGGCAGGAACACATCA 60.004 57.895 0.00 0.00 30.54 3.07
4795 4959 1.003839 TGGTCGGCAGGAACACATC 60.004 57.895 0.00 0.00 37.47 3.06
4796 4960 1.003355 CTGGTCGGCAGGAACACAT 60.003 57.895 0.00 0.00 37.47 3.21
4797 4961 2.425592 CTGGTCGGCAGGAACACA 59.574 61.111 0.00 0.00 37.47 3.72
4798 4962 3.050275 GCTGGTCGGCAGGAACAC 61.050 66.667 0.00 0.00 37.47 3.32
4799 4963 4.680237 CGCTGGTCGGCAGGAACA 62.680 66.667 2.55 0.00 41.00 3.18
4810 4974 2.829043 TAATTGTCGCTCGCGCTGGT 62.829 55.000 5.56 0.00 39.59 4.00
4811 4975 2.164663 TAATTGTCGCTCGCGCTGG 61.165 57.895 5.56 0.00 39.59 4.85
4812 4976 1.013323 GTAATTGTCGCTCGCGCTG 60.013 57.895 5.56 0.00 39.59 5.18
4813 4977 2.165301 GGTAATTGTCGCTCGCGCT 61.165 57.895 5.56 0.00 39.59 5.92
4814 4978 2.320044 GGTAATTGTCGCTCGCGC 59.680 61.111 0.00 0.00 39.59 6.86
4815 4979 1.151777 ATGGGTAATTGTCGCTCGCG 61.152 55.000 0.00 0.00 41.35 5.87
4816 4980 0.582005 GATGGGTAATTGTCGCTCGC 59.418 55.000 0.00 0.00 0.00 5.03
4817 4981 1.217882 GGATGGGTAATTGTCGCTCG 58.782 55.000 0.00 0.00 0.00 5.03
4818 4982 2.213499 CTGGATGGGTAATTGTCGCTC 58.787 52.381 0.00 0.00 0.00 5.03
4819 4983 1.747206 GCTGGATGGGTAATTGTCGCT 60.747 52.381 0.00 0.00 0.00 4.93
4820 4984 0.663153 GCTGGATGGGTAATTGTCGC 59.337 55.000 0.00 0.00 0.00 5.19
4821 4985 2.036958 TGCTGGATGGGTAATTGTCG 57.963 50.000 0.00 0.00 0.00 4.35
4822 4986 3.701040 ACAATGCTGGATGGGTAATTGTC 59.299 43.478 0.00 0.00 0.00 3.18
4823 4987 3.701040 GACAATGCTGGATGGGTAATTGT 59.299 43.478 0.00 0.00 34.22 2.71
4824 4988 3.956199 AGACAATGCTGGATGGGTAATTG 59.044 43.478 0.00 0.00 0.00 2.32
4825 4989 4.210331 GAGACAATGCTGGATGGGTAATT 58.790 43.478 0.00 0.00 0.00 1.40
4826 4990 3.435601 GGAGACAATGCTGGATGGGTAAT 60.436 47.826 0.00 0.00 0.00 1.89
4827 4991 2.092429 GGAGACAATGCTGGATGGGTAA 60.092 50.000 0.00 0.00 0.00 2.85
4828 4992 1.490490 GGAGACAATGCTGGATGGGTA 59.510 52.381 0.00 0.00 0.00 3.69
4829 4993 0.257039 GGAGACAATGCTGGATGGGT 59.743 55.000 0.00 0.00 0.00 4.51
4830 4994 0.256752 TGGAGACAATGCTGGATGGG 59.743 55.000 0.00 0.00 37.44 4.00
4831 4995 1.676746 CTGGAGACAATGCTGGATGG 58.323 55.000 0.00 0.00 42.06 3.51
4832 4996 1.022735 GCTGGAGACAATGCTGGATG 58.977 55.000 0.00 0.00 42.06 3.51
4833 4997 0.463295 CGCTGGAGACAATGCTGGAT 60.463 55.000 0.00 0.00 42.06 3.41
4834 4998 1.078918 CGCTGGAGACAATGCTGGA 60.079 57.895 0.00 0.00 42.06 3.86
4835 4999 1.078918 TCGCTGGAGACAATGCTGG 60.079 57.895 0.00 0.00 42.06 4.85
4836 5000 0.671472 TGTCGCTGGAGACAATGCTG 60.671 55.000 4.79 0.00 46.81 4.41
4837 5001 1.673477 TGTCGCTGGAGACAATGCT 59.327 52.632 4.79 0.00 46.81 3.79
4838 5002 4.284123 TGTCGCTGGAGACAATGC 57.716 55.556 4.79 0.00 46.81 3.56
4843 5007 1.079750 GGGAGTTGTCGCTGGAGAC 60.080 63.158 0.00 0.00 41.30 3.36
4844 5008 2.283529 GGGGAGTTGTCGCTGGAGA 61.284 63.158 0.00 0.00 35.92 3.71
4845 5009 2.266055 GGGGAGTTGTCGCTGGAG 59.734 66.667 0.00 0.00 35.92 3.86
4846 5010 2.525629 TGGGGAGTTGTCGCTGGA 60.526 61.111 0.00 0.00 35.92 3.86
4847 5011 2.046892 CTGGGGAGTTGTCGCTGG 60.047 66.667 0.00 0.00 35.92 4.85
4848 5012 2.743928 GCTGGGGAGTTGTCGCTG 60.744 66.667 0.00 0.00 35.92 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.